Citrus Sinensis ID: 033331

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPEHHNGPRGS
Secondary Structure (PSIPRED)
ccccccccHHcccccccccccccccEEEEcccEEEEcccccccccccccccEEEEEcccHHHHHHHHHHHHHHHccccccccccccHHHccccccHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHccccccccccccccccEEccccEEEcccccccccccccccEEEEEcccHHHHHHHHHHHHHHHccccccccccHcHHHHcccccHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MATFSAITSvifapslkpslsnnviaerTSNLKMAiggwrknrfpslktnrfcvscsakpeTVQKVCEIVRRQlalpaeteltseskfsalggnsdeLRRRIWDWcrrgklpehhngprgs
Flexible Loop (DISEMBL)
matfsaitsvifapslkpslsnNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLalpaeteltseskfsalggnsdelRRRIWDWcrrgklpehhngprgs
Low Complexity Region (SEG)
MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPEHHNGPRGS
Disordered region (IsUnstruct)
*****AITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALP********************LRRRIWDWCRR*************
Disordered Region (DISOPRED)
**************************************************RFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP*********
Disordered Region (DISEMBL)
MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP*********
Disordered Region (DISPRO)
*****************************SNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPEHHNGPRGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
P93092	136	Acyl carrier protein 1, c	N/A	no	0.702	0.625	0.431	4e-12
P52413	143	Acyl carrier protein 3, c	N/A	no	0.785	0.664	0.434	4e-11
P52411	140	Acyl carrier protein 1, c	N/A	no	0.561	0.485	0.5	5e-11
P52414	139	Acyl carrier protein 4, c	N/A	no	0.561	0.489	0.507	9e-11
Q9SW21	137	Acyl carrier protein 4, c	yes	no	0.438	0.386	0.611	1e-10
P15543	132	Acyl carrier protein 3, c	N/A	no	0.487	0.446	0.524	1e-09
P25701	136	Acyl carrier protein 2, c	no	no	0.380	0.338	0.565	4e-09
P52412	137	Acyl carrier protein 2, c	N/A	no	0.462	0.408	0.517	8e-09
P25702	136	Acyl carrier protein 3, c	no	no	0.380	0.338	0.543	1e-08
P07088	134	Acyl carrier protein SF2,	N/A	no	0.380	0.343	0.5	4e-08

>sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 10/95 (10%)

Query: 3  TFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLK--TNRFCVSCSAKP 60
          T ++I+   F  SL PS        R SNL+      +   F  L+  + RF V C+AKP
Sbjct: 5  TGTSISMASFKASLAPS--------RVSNLRSVSLPIKGKSFAPLRMRSARFVVCCAAKP 56

Query: 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          ETV+KVC IV++QLALP ++ +T ESKF+ LG +S
Sbjct: 57 ETVEKVCAIVKKQLALPDDSAVTGESKFATLGADS 91

Carrier of the growing fatty acid chain in fatty acid biosynthesis.
Casuarina glauca (taxid: 3522)

>sp|P52413|ACP3_CUPLA Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 4/99 (4%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNR----FCVSC 56
          MAT +A +S+I   S   SL+   +    S+L+          FPSL+++R    F V C
Sbjct: 1  MATAAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCC 60

Query: 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
           AK ETV +VCEIV++QLALP ++E+   SKFSALG +S
Sbjct: 61 QAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADS 99

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Cuphea lanceolata (taxid: 3930)

>sp|P52411|ACP1_CUPLA Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)

Query: 28 RTSNLKMAIGGWRKNRFPSLKTNR----FCVSCSAKPETVQKVCEIVRRQLALPAETELT 83
          R S+L+       +  FPSLK+++      VSC AKPETV KVC IV++QLALP ++E+ 
Sbjct: 24 RISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVN 83

Query: 84 SESKFSALGGNS 95
            SKFSALG +S
Sbjct: 84 GLSKFSALGADS 95

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Cuphea lanceolata (taxid: 3930)

>sp|P52414|ACP4_CUPLA Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 3/71 (4%)

Query: 28 RTSNLKMAIGGWRKNRFPSLKTNR--FC-VSCSAKPETVQKVCEIVRRQLALPAETELTS 84
          R S+L+       +  FPSL++++  F  VSC AKPETV KVC IV++QLALP ++E+  
Sbjct: 24 RISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNG 83

Query: 85 ESKFSALGGNS 95
           SKFSALG +S
Sbjct: 84 LSKFSALGADS 94

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Cuphea lanceolata (taxid: 3930)

>sp|Q9SW21|ACP4_ARATH Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 1/54 (1%)

Query: 43 RFPS-LKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          RF S  K+ R  +SC+AK ETVQKV +IV+ QLAL A+  LT+ESKFSALG +S
Sbjct: 35 RFTSSTKSLRLQISCAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADS 88

Carrier of the growing fatty acid chain in fatty acid biosynthesis that plays a major role in the biosynthesis of fatty acids in leaves. Required for the biosynthesis of chloroplast photosynthetic membrane lipids such as monogalactosyldiacylglycerol, digalactosyldiacylglycerol and phosphatidylglycerol. Is essential for the biosynthesis of the cuticular wax and cutin polymers in leaves, and for the establishment of systemic acquired resistance (SAR).

Arabidopsis thaliana (taxid: 3702)

>sp|P15543|ACP3_HORVU Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 37 GGWRKNRFPSLKT--NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGN 94
          G  R N F  L+    RF V CSAK +TV+KVCEIV++QLA+P  TE+   +KFS LG +
Sbjct: 27 GARRGNAFLRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKFSDLGAD 86

Query: 95 S 95
          S
Sbjct: 87 S 87

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Hordeum vulgare (taxid: 4513)

>sp|P25701|ACP2_ARATH Acyl carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=ACP2 PE=1 SV=2

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 50 NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
           R  VSC+AKPETV KVC +VR+QL+L    E+T+ +KF+ALG +S
Sbjct: 46 TRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADS 91

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|P52412|ACP2_CUPLA Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%)

Query: 40 RKNRFPSLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          RK+ F    +    V+C AKPETV KVC IV++QLALP +++++  SKFSALG +S
Sbjct: 37 RKSFFSRRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADS 92

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Cuphea lanceolata (taxid: 3930)

>sp|P25702|ACP3_ARATH Acyl carrier protein 3, chloroplastic OS=Arabidopsis thaliana GN=ACP3 PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 50 NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
           R  V C+AKPETV KVC +VR+QL+L    E+T+ +KF+ALG +S
Sbjct: 46 TRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADS 91

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|P07088|ACP_BRACM Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 37/46 (80%)

Query: 50 NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
           RF +SC+AKPETV+KV +IV++QL+L  + ++ +E+KF+ LG +S
Sbjct: 45 TRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADS 90

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Brassica campestris (taxid: 3711)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
225425224	139	PREDICTED: acyl carrier protein 4, chlor	0.768	0.669	0.652	9e-24
356527612	142	PREDICTED: acyl carrier protein 1, chlor	0.776	0.661	0.552	2e-19
255540085	137	acyl carrier protein, putative [Ricinus	0.768	0.678	0.547	3e-17
224119790	138	predicted protein [Populus trichocarpa]	0.752	0.659	0.572	1e-16
357520563	137	Acyl carrier protein [Medicago truncatul	0.768	0.678	0.515	2e-15
356513457	143	PREDICTED: acyl carrier protein 4, chlor	0.776	0.657	0.515	3e-15
388516599	136	unknown [Lotus japonicus]	0.752	0.669	0.531	3e-15
255630845	131	unknown [Glycine max]	0.776	0.717	0.515	3e-15
284808851	140	acyl carrier protein 4 [Arachis hypogaea	0.702	0.607	0.511	1e-14
284808855	140	acyl carrier protein 4 [Arachis hypogaea	0.702	0.607	0.511	1e-14

>gi|225425224|ref|XP_002267614.1| PREDICTED: acyl carrier protein 4, chloroplastic [Vitis vinifera] gi|296088168|emb|CBI35660.3| unnamed protein product [Vitis vinifera]

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 73/95 (76%), Gaps = 2/95 (2%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKP 60
          MA  SA TSV F  SLK  L +  I  + S+LKM   GW K+ FPSL+T+RF VSCSAKP
Sbjct: 1  MAAVSA-TSVTFGSSLKL-LKSRQITGKASSLKMVTVGWTKSGFPSLRTSRFRVSCSAKP 58

Query: 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          ETVQKVCEIV++QLALPAE+ELT ESKF+ALG +S
Sbjct: 59 ETVQKVCEIVKKQLALPAESELTPESKFAALGADS 93

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527612|ref|XP_003532402.1| PREDICTED: acyl carrier protein 1, chloroplastic-like [Glycine max]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 72/96 (75%), Gaps = 2/96 (2%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCV-SCSAK 59
          MA+ SA TS+ F PSLK S   +    +TS+L++   GW +  FPSL+++RFC+ +  A+
Sbjct: 1  MASVSA-TSLSFQPSLKLSTRTSQGCYKTSSLEVVSVGWNRRTFPSLRSSRFCICAVKAQ 59

Query: 60 PETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          PETVQKVC IVR+QLALPAE+ELT ++KFSALG +S
Sbjct: 60 PETVQKVCNIVRKQLALPAESELTPDTKFSALGADS 95

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540085|ref|XP_002511107.1| acyl carrier protein, putative [Ricinus communis] gi|223550222|gb|EEF51709.1| acyl carrier protein, putative [Ricinus communis]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKP 60
          MA+ SA + + F P L  S   +++A RTS+  M  G W KN FPSLK +RF +SC+AKP
Sbjct: 1  MASVSA-SCLSFQPLLFHSNKTSLVAGRTSS-NMVSGNWAKNGFPSLKASRFRISCAAKP 58

Query: 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          ETV KVC+IVR+QLAL  E +L+ ESKFS LG +S
Sbjct: 59 ETVDKVCDIVRKQLALAPEIKLSPESKFSELGADS 93

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119790|ref|XP_002318163.1| predicted protein [Populus trichocarpa] gi|222858836|gb|EEE96383.1| predicted protein [Populus trichocarpa]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 5/96 (5%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNR-FPSLKTNRFCVSCSAK 59
          MAT SA T + F P    S   N  ++  ++LK    GW KN  FPSLK +RF VSC+AK
Sbjct: 1  MATVSA-TCLRFQPLFSQS---NKSSQAAASLKPVSVGWAKNNGFPSLKASRFRVSCAAK 56

Query: 60 PETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          PETV+KV EIVR+QLAL  ETELT+ESKF+ALG +S
Sbjct: 57 PETVEKVIEIVRKQLALTPETELTNESKFAALGADS 92

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520563|ref|XP_003630570.1| Acyl carrier protein [Medicago truncatula] gi|355524592|gb|AET05046.1| Acyl carrier protein [Medicago truncatula]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKP 60
          MA+ SA TS+ F PS K S S N ++ RTS+      G  +  FPSL+++RF + C+A+P
Sbjct: 1  MASLSA-TSLTFQPSFKFSTSTNQVSFRTSSFGAISVGCTRRSFPSLRSSRFRI-CAAQP 58

Query: 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          ETV+KV +IVR+QLAL  ET+LT E+KFS LG +S
Sbjct: 59 ETVEKVSKIVRKQLALTPETKLTPETKFSELGADS 93

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513457|ref|XP_003525430.1| PREDICTED: acyl carrier protein 4, chloroplastic [Glycine max]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 3/97 (3%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIA-ERTSNLKMAIGGWRKNRFPSLKTNRFCV-SCSA 58
          MA+ SA TS+ F P LK S         +TS+L     GW +  FPSL+++R  + +  A
Sbjct: 1  MASVSA-TSLRFQPFLKLSTRTTTQGCYKTSSLGAVSVGWNRRTFPSLRSSRLRICAVKA 59

Query: 59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          +PETVQKVC+IVR+QLALPAE+ELT ++KFSALG +S
Sbjct: 60 QPETVQKVCDIVRKQLALPAESELTPDTKFSALGADS 96

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516599|gb|AFK46361.1| unknown [Lotus japonicus]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 5/96 (5%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCV-SCSAK 59
          MA+ SA TSV   PS K  LS+ V + R S L+    GW   RFPSL+++RF + +  A+
Sbjct: 1  MASVSA-TSVSLQPSFK--LSSQV-SSRISGLRAVSVGWTTRRFPSLRSSRFRICAVQAQ 56

Query: 60 PETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          PET++KVC+IVR+QLAL  E+ELT E+KFSALG +S
Sbjct: 57 PETMEKVCKIVRKQLALAPESELTPETKFSALGADS 92

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255630845|gb|ACU15785.1| unknown [Glycine max]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 3/97 (3%)

Query: 1  MATFSAITSVIFAPSLKPSLSNNVIA-ERTSNLKMAIGGWRKNRFPSLKTNRFCV-SCSA 58
          MA+ SA TS+ F P LK S         +TS+L     GW +  FPSL+++R  + +  A
Sbjct: 1  MASVSA-TSLRFQPFLKLSTRTTTQGCYKTSSLGAVSVGWNRRTFPSLRSSRLRICAVKA 59

Query: 59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          +PETVQKVC+IVR+QLALPAE+ELT ++KFSALG +S
Sbjct: 60 QPETVQKVCDIVRKQLALPAESELTPDTKFSALGADS 96

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284808851|gb|ADB94673.1| acyl carrier protein 4 [Arachis hypogaea] gi|284808861|gb|ADB94678.1| acyl carrier protein 4 [Arachis hypogaea] gi|288551670|gb|ADC53305.1| acyl carrier protein [Arachis hypogaea]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 3/88 (3%)

Query: 8  TSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVC 67
          TS+ FA SL  SLS+    + +S       GW +  FPSL+++RF + C+A+PETV KVC
Sbjct: 9  TSLRFAQSL--SLSSKTTLQASSRFGAVSVGWSRRSFPSLRSSRFRI-CAAQPETVDKVC 65

Query: 68 EIVRRQLALPAETELTSESKFSALGGNS 95
          EIVR+QLALP E++LT E+ F+ALG +S
Sbjct: 66 EIVRKQLALPPESQLTPETTFTALGADS 93

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284808855|gb|ADB94675.1| acyl carrier protein 4 [Arachis hypogaea]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 3/88 (3%)

Query: 8  TSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPETVQKVC 67
          TS+ FA SL  SLS+    + +S       GW +  FPSL+++RF + C+A+PETV KVC
Sbjct: 9  TSLRFAQSL--SLSSKTTLQASSRFGAVSVGWSRRSFPSLRSSRFRI-CAAQPETVDKVC 65

Query: 68 EIVRRQLALPAETELTSESKFSALGGNS 95
          EIVR+QLALP E++LT E+ F+ALG +S
Sbjct: 66 EIVRKQLALPPESQLTPETTFTALGADS 93

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2199461	136	ACP2 "AT1G54580" [Arabidopsis	0.735	0.654	0.373	6.6e-10
TAIR|locus:2199517	136	ACP3 "acyl carrier protein 3"	0.479	0.426	0.483	7.6e-09
TAIR|locus:2181216	139	ACP5 "AT5G27200" [Arabidopsis	0.677	0.589	0.372	1.2e-08
TAIR|locus:2114820	137	ACP1 "acyl carrier protein 1"	0.413	0.364	0.44	2.9e-07

TAIR|locus:2199461 ACP2 "AT1G54580" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query:     7 ITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKT--NRFCVSCSAKPETVQ 64
             + S+  + S+        +A   S +K    G R +   +L+    R  VSC+AKPETV 
Sbjct:     1 MASIAASASISLQARPRQLAIAASQVKSFSNGRRSSLSFNLRQLPTRLTVSCAAKPETVD 60

Query:    65 KVCEIVRRQLALPAETELTSESKFSALGGNS 95
             KVC +VR+QL+L    E+T+ +KF+ALG +S
Sbjct:    61 KVCAVVRKQLSLKEADEITAATKFAALGADS 91

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=IDA

TAIR|locus:2199517 ACP3 "acyl carrier protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query:    38 GWRKNRFPSLKT--NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
             G R N   +L+    R  V C+AKPETV KVC +VR+QL+L    E+T+ +KF+ALG +S
Sbjct:    32 GSRSNLSFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADS 91

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2181216 ACP5 "AT5G27200" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/94 (37%), Positives = 58/94 (61%)

Query:     2 ATFSAITSVIFAPSLKPSLSNNVIAERTSNLKMAIGGWRKNRFPSLKTNRFCVSCSAKPE 61
             A FSA T+  F  + + ++ NN   E+T+NL  ++    +   P+    R  VSC+ K E
Sbjct:    13 APFSA-TTTRFCLNKQATIFNN---EKTNNLSFSL----RRLMPA----RLAVSCAVKQE 60

Query:    62 TVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
             TV+KV EIV++QL+L  + ++T+ +KF+ LG +S
Sbjct:    61 TVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADS 94

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

TAIR|locus:2114820 ACP1 "acyl carrier protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 22/50 (44%), Positives = 37/50 (74%)

Query:    46 SLKTNRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
             S+ + R  VSC+AK ET++KV  IV++QL+L  + ++ +E+KF+ LG +S
Sbjct:    44 SIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADS 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.130   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      121       121   0.00091  102 3  11 22  0.36    31
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  134 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.00u 0.19s 12.19t   Elapsed:  00:00:01
  Total cpu time:  12.00u 0.19s 12.19t   Elapsed:  00:00:01
  Start:  Fri May 10 23:32:54 2013   End:  Fri May 10 23:32:55 2013

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=IDA;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0051607 "defense response to virus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00006175001	RecName- Full=Acyl carrier protein;; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity) (139 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00007299001	SubName- Full=Chromosome chr2 scaffold_187, whole genome shotgun sequence; (431 aa)	•					•	•		0.845
	GSVIVG00024012001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa)	•			•		•	•		0.783
	GSVIVG00016391001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (405 aa)	•						•		0.577
	GSVIVG00003432001	SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (463 aa)	•						•		0.569
	GSVIVG00025980001	SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (418 aa)	•						•		0.563
	GSVIVG00034037001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (502 aa)	•						•		0.489
	GSVIVG00009555001	SubName- Full=Chromosome chr12 scaffold_238, whole genome shotgun sequence; (211 aa)	•						•		0.488
	GSVIVG00034687001	RecName- Full=Acyl-[acyl-carrier protein] desaturase; EC=1.14.19.2;; Converts stearoyl-ACP to o [...] (392 aa)							•		0.483
	GSVIVG00034684001	SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence;; Converts stearoyl-AC [...] (387 aa)							•		0.483
	GSVIVG00034679001	RecName- Full=Acyl-[acyl-carrier protein] desaturase; EC=1.14.19.2;; Converts stearoyl-ACP to o [...] (352 aa)							•		0.483

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
KOG1748	131	consensus Acyl carrier protein/NADH-ubiquinone oxi	99.78
PRK07117	79	acyl carrier protein; Validated	99.65
PRK05828	84	acyl carrier protein; Validated	99.56
PRK05883	91	acyl carrier protein; Validated	99.54
PRK05350	82	acyl carrier protein; Provisional	99.52
PRK06508	93	acyl carrier protein; Provisional	99.52
PRK08172	82	putative acyl carrier protein IacP; Validated	99.52
PRK07639	86	acyl carrier protein; Provisional	99.51
PRK12449	80	acyl carrier protein; Provisional	99.5
CHL00124	82	acpP acyl carrier protein; Validated	99.48
PTZ00171	148	acyl carrier protein; Provisional	99.47
COG0236	80	AcpP Acyl carrier protein [Lipid metabolism / Seco	99.44
TIGR00517	77	acyl_carrier acyl carrier protein. S (Ser) at posi	99.43
PRK09184	89	acyl carrier protein; Provisional	99.38
PRK07081	83	acyl carrier protein; Provisional	99.27
PRK00982	78	acpP acyl carrier protein; Provisional	99.2
PF00550	67	PP-binding: Phosphopantetheine attachment site; In	99.15
PRK05087	78	D-alanine--poly(phosphoribitol) ligase subunit 2;	99.12
TIGR01688	73	dltC D-alanine--poly(phosphoribitol) ligase, subun	98.66
PF14573	96	PP-binding_2: Acyl-carrier; PDB: 3CE7_A.	98.17
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.15
smart00823	86	PKS_PP Phosphopantetheine attachment site. Phospho	98.01
PF07377	111	DUF1493: Protein of unknown function (DUF1493); In	97.62
PRK06060	705	acyl-CoA synthetase; Validated	97.33
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	96.9
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.78
PRK10252	1296	entF enterobactin synthase subunit F; Provisional	96.55
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.26
PRK12467	3956	peptide synthase; Provisional	95.87
PRK05691	4334	peptide synthase; Validated	95.25
PRK12316	5163	peptide synthase; Provisional	95.15
PRK12467	3956	peptide synthase; Provisional	95.14
PRK05691	4334	peptide synthase; Validated	94.82
PRK12316	5163	peptide synthase; Provisional	94.4
COG3433	74	Aryl carrier domain [Secondary metabolites biosynt	92.52
TIGR02372	386	4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv	90.05

>KOG1748 consensus Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit [Energy production and conversion; Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.78  E-value=6.6e-20  Score=136.32  Aligned_cols=56  Identities=25%  Similarity=0.331  Sum_probs=54.4

Q ss_pred             cCChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCC
Q 033331           56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        56 c~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      |++|+++.+||.+||+++..+ ++++++++++|. |||+||||+|||||+|||||||+
T Consensus        48 ~l~k~~v~~RVl~VVk~~dki-~~~k~~~~s~f~~DLGlDSLD~VEiVMAlEEEFgiE  104 (131)
T KOG1748|consen   48 CLAKKEVVDRVLDVVKKFDKI-DPSKLTTDSDFFKDLGLDSLDTVEIVMALEEEFGIE  104 (131)
T ss_pred             hhhHHHHHHHHHHHHHHhhcC-CccccchhhHHHHhcCCcccccchhhhhhHHHhCCc
Confidence            999999999999999999999 999999999998 99999999999999999999984

>PRK07117 acyl carrier protein; Validated

Probab=99.65  E-value=2.1e-16  Score=107.63  Aligned_cols=54  Identities=19%  Similarity=0.190  Sum_probs=51.4

Q ss_pred             ChHHHHHHHHHHHHHHh-CCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           58 AKPETVQKVCEIVRRQL-ALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l-~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ++++++++|+++|++++ ++ ++++|+++++|.|||+||||++|||+++|++|||.
T Consensus         2 ~~~ei~~~v~~ii~e~~p~i-~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~   56 (79)
T PRK07117          2 DKQRIFDILVRHIREVLPDL-DQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLK   56 (79)
T ss_pred             CHHHHHHHHHHHHHHHcCCC-CHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCc
Confidence            57899999999999999 79 99999999999999999999999999999999983

>PRK05828 acyl carrier protein; Validated

Probab=99.56  E-value=6.3e-15  Score=101.50  Aligned_cols=56  Identities=16%  Similarity=0.110  Sum_probs=51.8

Q ss_pred             CChHHHHHHHHHHHHH-HhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRR-QLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~-~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++.|++++|++|+++ ++++ +.+.++++++|.|||+||||++|++++||++|||+-
T Consensus         1 m~~~eI~~~i~~ii~e~~~~~-~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i   57 (84)
T PRK05828          1 MQEMEILLKIKEIAKKKNFAV-TLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEF   57 (84)
T ss_pred             CCHHHHHHHHHHHHHHhccCC-CcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCc
Confidence            4678999999999998 6888 888999999999999999999999999999999853

>PRK05883 acyl carrier protein; Validated

Probab=99.54  E-value=1.4e-14  Score=100.61  Aligned_cols=60  Identities=17%  Similarity=0.207  Sum_probs=55.2

Q ss_pred             eeeecCChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           52 FCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        52 ~~v~c~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ||- |.++.++.++|++||++++++ +++.|+++++|. |||+|||+++++++.||++|||..
T Consensus         6 ~~~-~~~~~~I~~~l~~iia~~l~v-~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i   66 (91)
T PRK05883          6 FAM-TSSPSTVSATLLSILRDDLNV-DLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVAL   66 (91)
T ss_pred             cCC-CCCHHHHHHHHHHHHHHHhCC-ChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCc
Confidence            444 677888999999999999999 889999999996 999999999999999999999954

>PRK05350 acyl carrier protein; Provisional

Probab=99.52  E-value=1.6e-14  Score=97.36  Aligned_cols=56  Identities=11%  Similarity=0.112  Sum_probs=52.3

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++++++++|++++++++++ ++.+|+++++|. |||+||||++||+++||++|||.-
T Consensus         2 m~~~~i~~~v~~ii~~~~~~-~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i   58 (82)
T PRK05350          2 MTREEILERLRAILVELFEI-DPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKI   58 (82)
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCcc
Confidence            46889999999999999999 889999999986 999999999999999999999963

>PRK06508 acyl carrier protein; Provisional

Probab=99.52  E-value=1.9e-14  Score=100.96  Aligned_cols=53  Identities=19%  Similarity=0.206  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ..++++|++|+++++++ ++++|+++++|. |||+||||++||+++||++|||+-
T Consensus         2 ~~i~ekv~~Ilae~~~v-d~~~It~ds~~~edL~~DSLd~veli~~lE~eFgI~i   55 (93)
T PRK06508          2 SSTFDKVADIIAETSDI-PRDTITPESHTIDDLGIDSLDFLDIVFAIDKAFGIKL   55 (93)
T ss_pred             hHHHHHHHHHHHHHhCC-CHHHCCCCCcchhccCCCHHHHHHHHHHHHHHHCCcc
Confidence            46899999999999999 999999999987 999999999999999999999853

>PRK08172 putative acyl carrier protein IacP; Validated

Probab=99.52  E-value=1.6e-14  Score=98.65  Aligned_cols=53  Identities=9%  Similarity=0.151  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+++++|++|+++++++ ++++|+++++|. |||+||||+++|+++||++|||.-
T Consensus         3 m~i~~~v~~iiae~l~v-~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i   56 (82)
T PRK08172          3 MDIEARVKKVITSCIAV-DVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISC   56 (82)
T ss_pred             ccHHHHHHHHHHHHHCC-CHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence            37999999999999999 999999999996 999999999999999999999954

>PRK07639 acyl carrier protein; Provisional

Probab=99.51  E-value=3.5e-14  Score=97.69  Aligned_cols=55  Identities=20%  Similarity=0.094  Sum_probs=50.7

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKL  111 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~I  111 (121)
                      +++++++++|++||++++++++.++++++++|. |||+||||++|++++||++|||
T Consensus         1 M~~~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi   56 (86)
T PRK07639          1 MRREALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKL   56 (86)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCC
Confidence            367899999999999999994447899999998 9999999999999999999998

>PRK12449 acyl carrier protein; Provisional

Probab=99.50  E-value=4.3e-14  Score=94.05  Aligned_cols=56  Identities=14%  Similarity=0.182  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|++++++++++ ++.+|+++++|. |||+||+|+++|+++||++|||.-
T Consensus         1 m~~~~i~~~l~~il~~~~~~-~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i   57 (80)
T PRK12449          1 MTREEIFERLINLIQKQRSY-LSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAI   57 (80)
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999 777999999996 999999999999999999999953

>CHL00124 acpP acyl carrier protein; Validated

Probab=99.48  E-value=5.5e-14  Score=93.94  Aligned_cols=56  Identities=23%  Similarity=0.332  Sum_probs=52.2

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++++++++|++++++.+++ ++..|+++++|. |||+|||+++||++.||++|||.-
T Consensus         1 M~~~~i~~~l~~ii~~~~~~-~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i   57 (82)
T CHL00124          1 MTKNDIFEKVQSIVAEQLGI-EKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEI   57 (82)
T ss_pred             CCHHHHHHHHHHHHHHHHCC-CHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCcc
Confidence            46889999999999999999 888999999998 799999999999999999999854

>PTZ00171 acyl carrier protein; Provisional

Probab=99.47  E-value=1e-13  Score=104.50  Aligned_cols=58  Identities=19%  Similarity=0.240  Sum_probs=54.0

Q ss_pred             eecCChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCC
Q 033331           54 VSCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        54 v~c~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ..-.++++++++|++|+.+++++ ++++|+++++|. |||+||||+||||++||++|||.
T Consensus        63 ~~~~~~~~v~~~l~eiiae~l~v-d~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~  121 (148)
T PTZ00171         63 QYLLSKEDVLTRVKKVVKNFEKV-DASKITPESNFVKDLGADSLDVVELLIAIEQEFNLT  121 (148)
T ss_pred             ccccCHHHHHHHHHHHHHHHhCC-CHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCc
Confidence            33477999999999999999999 889999999997 99999999999999999999985

>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.44  E-value=2e-13  Score=91.59  Aligned_cols=54  Identities=24%  Similarity=0.279  Sum_probs=50.0

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+.+.++|++|+.+++++ +..++++++.|. |||+||||++||+++||++|||.-
T Consensus         3 ~~~~~~~i~~ii~e~l~~-~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i   57 (80)
T COG0236           3 MEAIEERVKDIIAEQLGV-DEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEI   57 (80)
T ss_pred             hHHHHHHHHHHHHHHhCC-chhhcCcccccccccCccHHHHHHHHHHHHHHHCCcC
Confidence            356999999999999999 788999999998 899999999999999999999853

>TIGR00517 acyl_carrier acyl carrier protein

Probab=99.43  E-value=1.9e-13  Score=90.33  Aligned_cols=53  Identities=23%  Similarity=0.310  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++|++++++.+++ ++.+|+++++|. |||+|||+++||++.||++|||.-
T Consensus         2 ~~i~~~l~~il~~~~~~-~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i   55 (77)
T TIGR00517         2 QEIFEKVKAIIKEQLNV-DEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEI   55 (77)
T ss_pred             hHHHHHHHHHHHHHHCC-CHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCC
Confidence            57899999999999999 888999999996 999999999999999999999853

S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.

>PRK09184 acyl carrier protein; Provisional

Probab=99.38  E-value=7.3e-13  Score=92.12  Aligned_cols=56  Identities=13%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             ChHHHHHHHHHHHHHHhCC--CCCCccCCCCcc-c-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLAL--PAETELTSESKF-S-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l--~d~~~It~eS~F-~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ..++++++|+++|.+++++  -++++|+++++| . |||+||||++||++.+|++|||+-
T Consensus         3 ~~~~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i   62 (89)
T PRK09184          3 SMTALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQL   62 (89)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcC
Confidence            3568999999999999985  278899999997 4 899999999999999999999965

>PRK07081 acyl carrier protein; Provisional

Probab=99.27  E-value=3.7e-12  Score=86.87  Aligned_cols=56  Identities=9%  Similarity=0.083  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHhCCC-CCCccCCCCccccCCCChHHHHHHHHHHHHhcCC--CCCCCCC
Q 033331           63 VQKVCEIVRRQLALP-AETELTSESKFSALGGNSDELRRRIWDWCRRGKL--PEHHNGP  118 (121)
Q Consensus        63 ~ekV~~IV~~~l~l~-d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~I--p~~~~~p  118 (121)
                      .++|++||.+++++. +++.++++++|.|||+|||+++++++.||++|||  |+.++.|
T Consensus         2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~   60 (83)
T PRK07081          2 KNTIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNR   60 (83)
T ss_pred             hHHHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCH
Confidence            578999999986552 5578999999999999999999999999999986  6666655

>PRK00982 acpP acyl carrier protein; Provisional

Probab=99.20  E-value=2.8e-11  Score=79.84  Aligned_cols=53  Identities=26%  Similarity=0.313  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .++.+.|++++++.+++ ++..++++++| .|||+|||++++|+..+|++|||+-
T Consensus         2 ~~i~~~l~~~l~~~l~~-~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i   55 (78)
T PRK00982          2 SEIFEKVKKIIVEQLGV-DEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEI   55 (78)
T ss_pred             hHHHHHHHHHHHHHHCC-CHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence            46889999999999999 78899999999 5999999999999999999999854

>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []

Probab=99.15  E-value=9.6e-11  Score=74.14  Aligned_cols=48  Identities=17%  Similarity=0.224  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           64 QKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        64 ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      |+|++++++.+++ +..+++++++|.++|+|||+.++++..||++||+.
T Consensus         1 e~l~~~~~~~l~~-~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~   48 (67)
T PF00550_consen    1 EQLREIIAEVLGV-DPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIK   48 (67)
T ss_dssp             HHHHHHHHHHHTS-SGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSS
T ss_pred             CHHHHHHHHHHCc-CHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCC
Confidence            6899999999998 88899999999999999999999999999999884

The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....

>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated

Probab=99.12  E-value=7.6e-11  Score=80.12  Aligned_cols=57  Identities=9%  Similarity=-0.052  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCC--CCCCCCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKL--PEHHNGP  118 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~I--p~~~~~p  118 (121)
                      ++.++|.+++.+.++. ++.++++++++. +.++|||++|||++.||++|||  |+.++-|
T Consensus         2 ~i~~~I~~iL~~~~~~-~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~   61 (78)
T PRK05087          2 DFKEQVLDILEELTGE-DIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDR   61 (78)
T ss_pred             cHHHHHHHHHHHHhCC-ChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCH
Confidence            5789999999999998 777899999998 5558999999999999999987  5555444

>TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2

Probab=98.66  E-value=1.7e-08  Score=68.49  Aligned_cols=54  Identities=9%  Similarity=0.029  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhCCCCCCccCCCCccccCCC-ChHHHHHHHHHHHHhcCC--CCCCCCC
Q 033331           64 QKVCEIVRRQLALPAETELTSESKFSALGG-NSDELRRRIWDWCRRGKL--PEHHNGP  118 (121)
Q Consensus        64 ekV~~IV~~~l~l~d~~~It~eS~F~DLGa-DSLD~VEIVm~LEdeF~I--p~~~~~p  118 (121)
                      ++|.+|+.+..+. +.....++.++.+.|+ ||+++|+++..||++|||  |..++-|
T Consensus         2 e~i~eIL~~i~~~-~~~~~~~d~~L~~~GllDS~~~v~Li~~lE~ef~I~i~~~el~~   58 (73)
T TIGR01688         2 NGVLDILAEVTGS-DDVKENPDLELFEEGLLDSFGTVQLLLEIQNQFDIDVPISEFDR   58 (73)
T ss_pred             hHHHHHHHHHhcC-cccccCccHHHHHccchhHHHHHHHHHHHHHHhCCccCHHHcCH
Confidence            6889999998877 5545688999999998 999999999999999988  5544444

This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein.

>PF14573 PP-binding_2: Acyl-carrier; PDB: 3CE7_A

Probab=98.17  E-value=2.5e-06  Score=60.63  Aligned_cols=49  Identities=14%  Similarity=0.121  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCccc------cCCCChHHHHHHHHHHHHhcCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKFS------ALGGNSDELRRRIWDWCRRGKL  111 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F~------DLGaDSLD~VEIVm~LEdeF~I  111 (121)
                      -+.+++..++++.+.  +..++++.+++.      ++-|||||+||+|+.+|++|+|
T Consensus        10 av~~~i~g~~kkyl~--~~~~it~~skL~e~rt~e~r~wD~LDtVefvldVEe~F~V   64 (96)
T PF14573_consen   10 AVTEYILGMLKKYLS--EGEEITYTSKLEESRTKEDRAWDSLDTVEFVLDVEEEFDV   64 (96)
T ss_dssp             HHHHHHHHHHHTTB---TT----TTS-GGGSBBTTSSB--HHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHcC--CCCccChhhhhHHhccccccccchhhhHHHHHhHHHHcCc
Confidence            466788888887764  455788887763      7899999999999999999988

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.15  E-value=2.4e-06  Score=86.19  Aligned_cols=51  Identities=14%  Similarity=-0.010  Sum_probs=48.7

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGK  110 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~  110 (121)
                      ..+++++|.+++.++++. +.+.++++++|. |||+|||+.+||++.||++|+
T Consensus      1305 ~~~v~~~vl~vvae~tgy-p~e~L~~d~~le~DLGiDSI~~vEil~~le~~f~ 1356 (2582)
T TIGR02813      1305 LIQIQNVMLEVVADKTGY-PTEMLELEMDMEADLGIDSIKRVEILGTVQDTLP 1356 (2582)
T ss_pred             HHHHHHHHHHHHHHHhCC-CHHHcCcccCchhhcCCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999 888999999998 999999999999999999997

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00823 PKS_PP Phosphopantetheine attachment site

Probab=98.01  E-value=2.4e-05  Score=48.76  Aligned_cols=54  Identities=19%  Similarity=0.030  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ..+.+.+...+.+.++......+..++.|.++|+||+..+++...++++|+++-
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i   64 (86)
T smart00823       11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRL   64 (86)
T ss_pred             HHHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCC
Confidence            346778889999998883333358899999999999999999999999998643

Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.

>PF07377 DUF1493: Protein of unknown function (DUF1493); InterPro: IPR010862 This family consists of several bacterial proteins of around 115 residues in length

Probab=97.62  E-value=0.00017  Score=51.31  Aligned_cols=55  Identities=16%  Similarity=0.261  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHhCCC---CCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCCC
Q 033331           60 PETVQKVCEIVRRQLALP---AETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPEH  114 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~---d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~~  114 (121)
                      +++.++|.+.|++..+.+   ...+|++++.+. |||+|--|..|++-...++|||...
T Consensus         2 ~~i~~~I~~fi~~~~~~~~~~~~~~it~dt~L~~DL~~~~dda~elm~~f~~~F~Vd~~   60 (111)
T PF07377_consen    2 DDIEQEIIEFIREENGPYLFFKKKPITPDTDLQEDLGLDGDDAEELMEDFFERFNVDLS   60 (111)
T ss_pred             chHHHHHHHHHHHHcCcccccCcccCCCCCcHHHhcCCCHHHHHHHHHHHHHHhCCCcC
Confidence            578899999999999985   678899999998 9999999999999999999999654

Members of this family are largely found in Salmonella and Yersinia species and several have been described as being putative cytoplasmic proteins. The function of this family is unknown.

>PRK06060 acyl-CoA synthetase; Validated

Probab=97.33  E-value=0.00043  Score=60.62  Aligned_cols=53  Identities=21%  Similarity=0.156  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+.+.|++.+.+.++..+++.|.++..|.|||.|||..||+.-.|+++||++.
T Consensus       545 ~~~~~v~~~~a~vl~~~~~~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l  597 (705)
T PRK06060        545 LVVDAVCAEAAKMLGEPDPWSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRL  597 (705)
T ss_pred             HHHHHHHHHHHHHhCCCChhhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCC
Confidence            45678999999999996677899999999999999999999999999999854

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=96.90  E-value=0.0018  Score=60.71  Aligned_cols=53  Identities=19%  Similarity=0.274  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .++.+.|.+++.+.++. +..+|.++.+|.+||.|||..++++..|+++||+..
T Consensus       847 ~~~~~~l~~~~~~vl~~-~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l  899 (1389)
T TIGR03443       847 TETEREIRDLWLELLPN-RPATISPDDSFFDLGGHSILATRMIFELRKKLNVEL  899 (1389)
T ss_pred             CHHHHHHHHHHHHHhCC-CccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCc
Confidence            46788999999999998 677899999999999999999999999999998753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.78  E-value=0.0014  Score=66.91  Aligned_cols=52  Identities=15%  Similarity=0.036  Sum_probs=48.5

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGK  110 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~  110 (121)
                      ...++.+.+.++|.++.|. +.+.++++.+|. |||+||++.+||+..++++|+
T Consensus      1208 ~~~~~~~~~l~vvae~tgy-p~e~L~ld~d~eaDLgIDSIkrveil~~l~~~~~ 1260 (2582)
T TIGR02813      1208 NDSAIQQVMMEVVAEKTGY-PTEMLELEMDMEADLGIDSIKRVEILGSVQEIIN 1260 (2582)
T ss_pred             chhHHHHHHHHHHHhhccC-ChHhcccccccccccCcchhhhHHhhhhhhhhcc
Confidence            3467899999999999999 888999999999 999999999999999999997

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK10252 entF enterobactin synthase subunit F; Provisional

Probab=96.55  E-value=0.0047  Score=57.20  Aligned_cols=51  Identities=20%  Similarity=0.146  Sum_probs=46.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ..++.+.|++|..+.+++ +  .+..+.+|.+||.|||..++++..|+++||+.
T Consensus       976 ~~~~e~~l~~~~~~~l~~-~--~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~ 1026 (1296)
T PRK10252        976 KTGTETIIAAAFSSLLGC-D--VVDADADFFALGGHSLLAMKLAAQLSRQFARQ 1026 (1296)
T ss_pred             CCHHHHHHHHHHHHHhCC-C--CCCCCcCHHHcCCChHHHHHHHHHHHHHhCCC
Confidence            457888999999999998 4  68999999999999999999999999999875

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.26  E-value=0.0035  Score=61.45  Aligned_cols=52  Identities=13%  Similarity=0.037  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           62 TVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        62 t~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ---.+.+.|+..+|+-|-+.|..++++.|||+|||.-+||--.||++|+|=.
T Consensus      2005 ~~~dLiatiA~IlGlrD~~~vn~~asLaDLGlDSLMsvEikQtLER~~dlVL 2056 (2376)
T KOG1202|consen 2005 SGRDLIATIAHILGLRDLKAVNDDASLADLGLDSLMSVEIKQTLEREFDLVL 2056 (2376)
T ss_pred             ccccHHHHHHHHhcchhHhhccCCCchhhccchhhhhHHHHHHHhhhhceee
Confidence            3345677788889998999999999999999999999999999999999843

>PRK12467 peptide synthase; Provisional

Probab=95.87  E-value=0.015  Score=60.89  Aligned_cols=52  Identities=19%  Similarity=0.188  Sum_probs=47.5

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ...++.++|++|..+.|++ +  .|..+.+|.|||.|||..+.++-.|+++||++
T Consensus      3602 p~~~~e~~l~~i~~~vL~~-~--~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~ 3653 (3956)
T PRK12467       3602 PRSEVEQQLAAIWADVLGV-E--QVGVTDNFFELGGDSLLALQVLSRIRQSLGLK 3653 (3956)
T ss_pred             CCCHHHHHHHHHHHHHhCC-C--CCCCCcchhcccchHHHHHHHHHHHHHHhCCC
Confidence            4568899999999999998 4  49999999999999999999999999999885

>PRK05691 peptide synthase; Validated

Probab=95.25  E-value=0.032  Score=58.84  Aligned_cols=52  Identities=19%  Similarity=0.235  Sum_probs=46.4

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ...++.++|+++.+++|++ +  .|.++.+|.+||.|||..|+++..++++||+.
T Consensus       583 ~~~~~e~~l~~~~~~vL~~-~--~i~~~~~ff~lGgdSL~a~~l~~~l~~~~g~~  634 (4334)
T PRK05691        583 SGDELQARIAAIWCEQLKV-E--QVAADDHFFLLGGNSIAATQVVARLRDELGID  634 (4334)
T ss_pred             CcchHHHHHHHHHHHHhCC-C--CCCcCCchhhcccchHHHHHHHHHHHHHhCCc
Confidence            3457889999999999998 4  68999999999999999999999999998874

>PRK12316 peptide synthase; Provisional

Probab=95.15  E-value=0.036  Score=59.30  Aligned_cols=54  Identities=22%  Similarity=0.140  Sum_probs=47.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +...++..+|++|.++.|++ +  +|..+.+|.+||.|||..|.++..|+++||++.
T Consensus      5068 ~~~~~~e~~l~~i~~~vL~~-~--~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l 5121 (5163)
T PRK12316       5068 APRSELEQQVAAIWAEVLQL-E--RVGLDDNFFELGGHSLLAIQVTSRIQLELGLEL 5121 (5163)
T ss_pred             CCCcHHHHHHHHHHHHHhCC-C--CCCCCCChhhccchHHHHHHHHHHHHHHcCCCC
Confidence            34567899999999999988 4  599999999999999999999999999998754

>PRK12467 peptide synthase; Provisional

Probab=95.14  E-value=0.037  Score=58.07  Aligned_cols=52  Identities=19%  Similarity=0.184  Sum_probs=47.0

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ...++.+.|++|..+.+++ +  .|..+.+|.+||.|||..+.++..++++||++
T Consensus      1027 p~~~~e~~l~~i~~~vL~~-~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~ 1078 (3956)
T PRK12467       1027 PQTELEKRLAAIWADVLKV-E--RVGLTDNFFELGGHSLLATQVISRVRQRLGIQ 1078 (3956)
T ss_pred             CCCHHHHHHHHHHHHHhCC-C--CCCCCCCchhccCccHHHHHHHHHHHHHhCCC
Confidence            3457889999999999988 4  59999999999999999999999999999875

>PRK05691 peptide synthase; Validated

Probab=94.82  E-value=0.054  Score=57.22  Aligned_cols=54  Identities=17%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.+.++..+|++|..+.|++ +  +|..+.+|.+||.|||..|.++-.++++||+..
T Consensus      4237 ~p~~~~e~~l~~iw~~vL~~-~--~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~ 4290 (4334)
T PRK05691       4237 APRNELEQTLATIWADVLKV-E--RVGVHDNFFELGGHSLLATQIASRVQKALQRNV 4290 (4334)
T ss_pred             CCCCHHHHHHHHHHHHHhCC-C--cCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCc
Confidence            34668999999999999998 4  599999999999999999999999999998753

>PRK12316 peptide synthase; Provisional

Probab=94.40  E-value=0.068  Score=57.35  Aligned_cols=54  Identities=17%  Similarity=0.153  Sum_probs=48.0

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +...++.++|++|..+.+++ +  .|..+.+|.+||.|||..++++-.++++||++.
T Consensus      2512 ~p~~~~e~~l~~iw~~vL~~-~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l 2565 (5163)
T PRK12316       2512 APQEGLEQRLAAIWQAVLKV-E--QVGLDDHFFELGGHSLLATQVVSRVRQDLGLEV 2565 (5163)
T ss_pred             CCCCHHHHHHHHHHHHHhCC-C--ccCCCCchhhhcchHHHHHHHHHHHHHHhCCCc
Confidence            34567889999999999998 4  589999999999999999999999999998854

>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=92.52  E-value=0.16  Score=34.89  Aligned_cols=41  Identities=20%  Similarity=0.257  Sum_probs=32.5

Q ss_pred             HHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHh
Q 033331           67 CEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRR  108 (121)
Q Consensus        67 ~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEde  108 (121)
                      .+.+.+-++. .+++++++.++.++|+||+-+|-++-.+-.+
T Consensus         4 r~~~~~Ll~e-~~~~l~dqeNLi~~GLDSiR~M~L~~~wR~~   44 (74)
T COG3433           4 REQIAELLGE-SVEELDDQENLIDYGLDSIRMMALLERWRKR   44 (74)
T ss_pred             HHHHHHHHcC-ChhhcCchhhHHHhchhHHHHHHHHHHHHHc
Confidence            3555555666 7788999999999999999999888776554

>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family

Probab=90.05  E-value=0.85  Score=38.28  Aligned_cols=57  Identities=12%  Similarity=0.046  Sum_probs=44.3

Q ss_pred             hHHHHHHHHHHHHHHhCC--------CCCCccCCCCccc--cCCCChHHHHHHHHHHHHhcCCCCCC
Q 033331           59 KPETVQKVCEIVRRQLAL--------PAETELTSESKFS--ALGGNSDELRRRIWDWCRRGKLPEHH  115 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l--------~d~~~It~eS~F~--DLGaDSLD~VEIVm~LEdeF~Ip~~~  115 (121)
                      ...+...+..+|...++-        ++...++.|+.+.  ++|+|||+.++|+..+-+-|++.+-.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (386)
T TIGR02372         5 AEAVGRLLVSLIAAEQQEGRVQHHQMPEARLLTADLRIDEETLGLDSLLRLSLVTAVAGFFHLSDTG   71 (386)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcccCchhhhcccccccccccccccHHHHHHHHHHHHHHhcccccc
Confidence            456778888888887743        1222388888884  89999999999999999999985543

Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	121
2ava_A	82	Solution Structure Of Stearoyl-Acyl Carrier Protein		3e-05
2xz0_D	82	The Structure Of The 2:1 (Partially Occupied) Compl		8e-05

>pdb|2AVA|A Chain A, Solution Structure Of Stearoyl-Acyl Carrier Protein Length = 82

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          AK ET+ KV +IV+ +LAL A+  +T++S+FS LG +S
Sbjct: 1  AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADS 38

>pdb|2XZ0|D Chain D, The Structure Of The 2:1 (Partially Occupied) Complex Between Stearoyl Acyl Carrier Protein Desaturase From Ricinus Communis (Castor Bean) And Acyl Carrier Protein. Length = 82

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGN 94
          AK ET+ KV +IV+ +LAL A+  +T++S+FS LG +
Sbjct: 1  AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGAD 37

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
2ava_A	82	ACP I, acyl carrier protein I, chloroplast; four-h	5e-06
1vku_A	100	Acyl carrier protein; TM0175, structural genomics,	2e-04

>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* Length = 82

 Score = 40.7 bits (96), Expect = 5e-06
 Identities = 19/38 (50%), Positives = 29/38 (76%)

Query: 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          AK ET+ KV +IV+ +LAL A+  +T++S+FS LG +S
Sbjct: 1  AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADS 38

>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 Length = 100

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNS 95
          + + + K  EI   ++    E  +  E+ F  LG +S
Sbjct: 15 RKKLIAKFVEIASEKMGKDLE-TVDEENTFKELGFDS 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
2l9f_A	102	CALE8, meacp; transferase, acyl carrier protein; N	99.61
2kci_A	87	Putative acyl carrier protein; alpha, ACP, PCP, st	99.55
1dv5_A	80	APO-DCP, APO-D-alanyl carrier protein; 3-helix bun	99.51
3gzm_A	81	Acyl carrier protein; helix bundle, phosphopanteth	99.48
3ejb_A	97	Acyl carrier protein; protein-protein complex, cyt	99.45
4dxe_H	101	ACP, acyl carrier protein; acyl-carrier-protein sy	99.45
2ava_A	82	ACP I, acyl carrier protein I, chloroplast; four-h	99.44
2lki_A	105	Putative uncharacterized protein; helical bundle,	99.44
1f80_D	81	Acyl carrier protein; transferase; HET: PN2; 2.30A	99.43
2kjs_A	87	Putative acyl carrier protein; alpha, ACP, PNS, st	99.43
2kwl_A	84	ACP, acyl carrier protein; structural genomics, se	99.42
2lol_A	81	ACP, acyl carrier protein; lipid transport; NMR {R	99.42
2qnw_A	82	Acyl carrier protein; malaria, SGC, structural gen	99.42
2kw2_A	101	Specialized acyl carrier protein; structural genom	99.41
2cnr_A	82	FAS, ACP, acyl carrier protein; polykdetide, phosp	99.39
1x3o_A	80	Acyl carrier protein; structural genomics, riken s	99.39
1vku_A	100	Acyl carrier protein; TM0175, structural genomics,	99.39
2l4b_A	88	Acyl carrier protein; infectious disease, human gr	99.39
2dnw_A	99	Acyl carrier protein; ACP, fatty acid biosynthesis	99.38
2lte_A	103	Specialized acyl carrier protein; APO protein, tra	99.07
2jq4_A	105	AGR_C_4658P, hypothetical protein ATU2571; ATC2521	99.36
1af8_A	86	Actinorhodin polyketide synthase acyl carrier Pro;	99.36
1l0i_A	78	Acyl carrier protein; acyl chain binding, fatty ac	99.34
2amw_A	83	Hypothetical protein NE2163; all helical protein,	99.34
1klp_A	115	ACP, ACPM, meromycolate extension acyl carrier pro	99.32
3ce7_A	107	Specific mitochodrial acyl carrier protein; malari	99.3
1or5_A	83	Acyl carrier protein; ACP, biosynthesis, frenolici	99.26
2ehs_A	77	ACP, acyl carrier protein; lipid transport, struct	99.25
2cgq_A	113	Acyl carrier protein ACPA; RV0033, protein transpo	99.23
1nq4_A	95	Oxytetracycline polyketide synthase acyl carrier p	99.23
2l3v_A	79	ACP, acyl carrier protein; structural genomi seatt	99.22
1fh1_A	92	NODF, nodulation protein F; ROOT nodulation factor	99.21
2cg5_B	91	Fatty acid synthase; transferase-hydrolase complex	99.16
2kr5_A	89	PKS, aflatoxin biosynthesis polyketide synthase; a	99.09
2afd_A	88	Protein ASL1650; twisted antiparallel helical bund	99.06
2liu_A	99	CURA; holo state, transferase; NMR {Lyngbya majusc	98.98
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	98.91
2ju1_A	95	Erythronolide synthase; carrier protein domain, mo	98.88
1dny_A	91	Non-ribosomal peptide synthetase peptidyl carrier	98.8
4i4d_A	93	Peptide synthetase NRPS type II-PCP; structural ge	98.75
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	98.69
3tej_A	329	Enterobactin synthase component F; nonribosomal pe	98.19
2cq8_A	110	10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH	97.79
2jgp_A	520	Tyrocidine synthetase 3; multifunctional enzyme, a	97.69
2fq1_A	287	Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy	97.19
2vsq_A	1304	Surfactin synthetase subunit 3; ligase, peptidyl c	96.85
4f6l_B	508	AUSA reductase domain protein; thioester reductase	96.63
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.77
4dg8_A	620	PA1221; ANL superfamily, adenylation domain, pepti	95.7
3rg2_A	617	Enterobactin synthase component E (ENTE), 2,3-DIH	95.06
1dd4_C	40	50S ribosomal protein L7/L12; dimer formation, fle	90.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	84.33
1zav_U	30	50S ribosomal protein L7/L12; ribosome structure a	82.83

>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}

Probab=99.61  E-value=1.2e-15  Score=108.30  Aligned_cols=55  Identities=20%  Similarity=0.181  Sum_probs=51.5

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +-.+++++|++||.+++++ ++++|+++++|. |||+||||+|||||.+|++||++-
T Consensus        11 ~~~~I~~~V~~ilaE~lev-~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~i   66 (102)
T 2l9f_A           11 AATGALELVRHLVAERAEL-PVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSA   66 (102)
T ss_dssp             SSCCHHHHHHHHHHHHTTS-CSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCST
T ss_pred             hHHHHHHHHHHHHHHHHCC-CHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCC
Confidence            4457999999999999999 999999999998 999999999999999999999963

>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A

Probab=99.51  E-value=3.3e-14  Score=93.50  Aligned_cols=61  Identities=10%  Similarity=0.035  Sum_probs=53.7

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCC-CChHHHHHHHHHHHHhcCC--CCCCCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALG-GNSDELRRRIWDWCRRGKL--PEHHNGPR  119 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLG-aDSLD~VEIVm~LEdeF~I--p~~~~~p~  119 (121)
                      +++++.++|+++++++++. ++.+++++++|.++| +|||++||+++.||++|||  |+..+.|+
T Consensus         1 ~~~~i~~~i~~il~~~~~~-~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~   64 (80)
T 1dv5_A            1 ADEAIKNGVLDILADLTGS-DDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRK   64 (80)
T ss_dssp             CCHHHHHHHHHHHHHHHTS-SSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTT
T ss_pred             CHHHHHHHHHHHHHHHhCC-CcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHH
Confidence            4789999999999999998 778899999999888 9999999999999999988  55555443

>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*

Probab=99.48  E-value=5.2e-14  Score=91.85  Aligned_cols=55  Identities=22%  Similarity=0.322  Sum_probs=51.8

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++++.++|++++++.+++ ++++|+++++|. |||+|||+++|+++.||++|||+-
T Consensus         2 ~~~~i~~~l~~ii~~~l~~-~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i   57 (81)
T 3gzm_A            2 SLKSTFDDIKKIISKQLSV-EEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTI   57 (81)
T ss_dssp             CHHHHHHHHHHHHHHHHTC-CGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             CHHHHHHHHHHHHHHHhCc-CHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence            5789999999999999999 888999999995 999999999999999999999964

>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*

Probab=99.45  E-value=9.6e-14  Score=95.02  Aligned_cols=56  Identities=20%  Similarity=0.217  Sum_probs=52.8

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+++++.++|++|+.+++++ ++++|+++++|. |||+|||+++||++.||++|||+.
T Consensus        18 ~t~~~i~~~l~~iia~~l~~-~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i   74 (97)
T 3ejb_A           18 SHMSTIEERVKKIIGEQLGV-KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEI   74 (97)
T ss_dssp             CCCCCHHHHHHHHHHHHSCC-CTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCc-CHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence            56889999999999999999 888999999995 999999999999999999999964

>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}

Probab=99.45  E-value=8.4e-14  Score=96.64  Aligned_cols=62  Identities=18%  Similarity=0.245  Sum_probs=51.2

Q ss_pred             cceeeecCChHHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           50 NRFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        50 ~r~~v~c~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .|++. -+.+.+++++|++||++++++ ++++|+++++| .|||+|||+++||++.||++|||+-
T Consensus        16 ~~~~~-~m~~mei~~~l~~iiae~l~~-~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i   78 (101)
T 4dxe_H           16 ENLYF-QSNAMENFDKVKDIIVDRLGV-DADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEI   78 (101)
T ss_dssp             ---------CTTHHHHHHHHHHHTTCC-CGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHH-hcCHHHHHHHHHHHHHHHHCc-ChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCC
Confidence            34554 345678999999999999999 88899999999 5999999999999999999999964

>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*

Probab=99.44  E-value=1.5e-13  Score=89.32  Aligned_cols=55  Identities=33%  Similarity=0.424  Sum_probs=50.8

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCC-ccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAET-ELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~-~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++++.++|++++.+.+++ +++ +|+++++|.|||+|||+++|+++.||++|||+-
T Consensus         1 ~~~~i~~~l~~i~~~~l~~-~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i   56 (82)
T 2ava_A            1 AKKETIDKVSDIVKEKLAL-GADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINV   56 (82)
T ss_dssp             CCHHHHHHHHHHHHHHTTC-SSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCC
T ss_pred             ChHHHHHHHHHHHHHHhCC-CcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCcc
Confidence            4789999999999999999 665 899999999999999999999999999999853

>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}

Probab=99.44  E-value=7.9e-14  Score=97.51  Aligned_cols=61  Identities=16%  Similarity=0.091  Sum_probs=49.2

Q ss_pred             ceeeecCChHHHHHHHHHHHHHHhCCCC--CCccCCCCccc-cCCC-ChHHHHHHHHHHHHhcCCC
Q 033331           51 RFCVSCSAKPETVQKVCEIVRRQLALPA--ETELTSESKFS-ALGG-NSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        51 r~~v~c~ak~et~ekV~~IV~~~l~l~d--~~~It~eS~F~-DLGa-DSLD~VEIVm~LEdeF~Ip  112 (121)
                      |=++.|.++.+++++|+++|.+++++ +  +++|+++++|. |||+ |||++|||++.||++|||+
T Consensus        14 ~~~~~~~~~m~i~~~i~~il~e~l~~-~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~   78 (105)
T 2lki_A           14 RENLYFQGHMQHLEAVRNILGDVLNL-GERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFS   78 (105)
T ss_dssp             ---------CCTHHHHHHHHHHHTTC-TTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSC
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHhCC-CcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCC
Confidence            55667788889999999999999999 6  67899999998 8999 9999999999999999984

>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A

Probab=99.43  E-value=1.9e-13  Score=88.34  Aligned_cols=56  Identities=16%  Similarity=0.309  Sum_probs=51.1

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|++++++.+++ ++++|+++++| .|||+|||+++|+++.||++|||+-
T Consensus         3 m~~~~i~~~l~~~l~~~l~~-~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i   59 (81)
T 1f80_D            3 LGSADTLERVTKIIVDRLGV-DEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEI   59 (81)
T ss_dssp             --CCHHHHHHHHHHHHHSSC-CSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCC-CHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCcc
Confidence            45789999999999999999 88899999999 5999999999999999999999864

>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}

Probab=99.42  E-value=2.1e-13  Score=89.07  Aligned_cols=56  Identities=23%  Similarity=0.241  Sum_probs=52.2

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|++++.+.+++ ++++|+++++| .|||+|||+++|+++.||++|||+-
T Consensus         5 m~~~~i~~~l~~~i~~~l~~-~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i   61 (84)
T 2kwl_A            5 MDNDEIFSKVRSIISEQLDK-KEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKI   61 (84)
T ss_dssp             STHHHHHHHHHHHHHHHHCC-CGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCT
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence            46789999999999999999 88899999999 5999999999999999999999854

>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}

Probab=99.42  E-value=2.9e-13  Score=87.52  Aligned_cols=56  Identities=21%  Similarity=0.181  Sum_probs=51.8

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|++++++.+++ ++++|+++++|. |||+|||+.+|++..||++|||+-
T Consensus         2 m~~~~i~~~l~~ii~~~l~~-~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i   58 (81)
T 2lol_A            2 STTDKIEQKVIEMVAEKLNK-DKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDI   58 (81)
T ss_dssp             CSHHHHHHHHHHHHHHHSCC-CTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCC-ChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCC
Confidence            35789999999999999999 788999999995 999999999999999999999853

>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}

Probab=99.42  E-value=2.6e-13  Score=88.47  Aligned_cols=56  Identities=18%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++++.++|++++.+.+++ ++++|+++++| .|||+|||+++|+++.||++|||+-
T Consensus         3 ~~~~~i~~~l~~ii~~~l~~-~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i   59 (82)
T 2qnw_A            3 SDDRPLLERVKDVVADQLGV-DRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSI   59 (82)
T ss_dssp             CCSHHHHHHHHHHHHHHHCC-CGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             CcHHHHHHHHHHHHHHHHCC-CHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcC
Confidence            35788999999999999999 88899999999 5999999999999999999999864

>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A

Probab=99.41  E-value=2.3e-13  Score=93.42  Aligned_cols=53  Identities=17%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .++.++|+++|++++++ ++++|+++++|. |||+|||++|||++.||++|||+-
T Consensus         2 ~~i~~~v~~ii~~~l~~-~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i   55 (101)
T 2kw2_A            2 TSTFDRVATIIAETCDI-PRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKL   55 (101)
T ss_dssp             CCHHHHHHHHHHHHHCC-CGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             hHHHHHHHHHHHHHhCC-CHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCcc
Confidence            36899999999999999 888999999995 999999999999999999999964

>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*

Probab=99.39  E-value=8.6e-13  Score=85.05  Aligned_cols=56  Identities=16%  Similarity=0.163  Sum_probs=51.8

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++++.++|++++++.+++ ++++|+++++|. |||+|||+.+|++..||++|||+-
T Consensus         3 m~~~~i~~~l~~~i~~~l~~-~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i   59 (82)
T 2cnr_A            3 ATQEEIVAGLAEIVNEIAGI-PVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKI   59 (82)
T ss_dssp             CCHHHHHHHHHHHHHHHSCC-CTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCC
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999 788999999995 999999999999999999999853

>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}

Probab=99.39  E-value=7.5e-13  Score=84.76  Aligned_cols=56  Identities=21%  Similarity=0.248  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|++++++.+++ ++++|+++++| .|||+|||+.+|++..||++|||+-
T Consensus         1 M~~~~i~~~l~~~i~~~l~~-~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i   57 (80)
T 1x3o_A            1 MTEQEIFEKVKAVIADKLQV-EPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEI   57 (80)
T ss_dssp             CCHHHHHHHHHHHHHHHHTC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCC
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCc
Confidence            35789999999999999999 78899999999 6999999999999999999999863

>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1

Probab=99.39  E-value=5.7e-13  Score=92.26  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=52.5

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +-++++.++|+++|.+.+++ ++++|+++++|.|||+|||+.|||++.||++|||+-
T Consensus        13 ~~~~~i~~~l~~ila~~l~v-~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i   68 (100)
T 1vku_A           13 MERKKLIAKFVEIASEKMGK-DLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRI   68 (100)
T ss_dssp             THHHHHHHHHHHHHHHTTCC-CCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCC
T ss_pred             ccHHHHHHHHHHHHHHHHCC-CHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCC
Confidence            45789999999999999999 788999999999999999999999999999999964

>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}

Probab=99.39  E-value=2e-13  Score=90.26  Aligned_cols=56  Identities=18%  Similarity=0.074  Sum_probs=51.2

Q ss_pred             CChHHHHHHHHHHHHHHh---CCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQL---ALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l---~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++++++.++|+++|.+.+   ++ ++++|+++++|. |||+|||+++|+++.||++|||+-
T Consensus         4 m~~~~i~~~v~~~i~~~l~~~~~-~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i   63 (88)
T 2l4b_A            4 MVSEEIKAQVMESVIGCLKLNDE-QKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEI   63 (88)
T ss_dssp             SSCHHHHHHHHHHHHHHHTCCHH-HHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHhhCCC-CHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCc
Confidence            467899999999999999   77 678899999995 999999999999999999999954

>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=9.7e-13  Score=89.33  Aligned_cols=56  Identities=14%  Similarity=0.042  Sum_probs=52.4

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+++++.++|++++.+.+++ ++++|+++++|. |||+|||+++||++.||++|||+-
T Consensus        11 m~~~~i~~~l~~~l~~~l~~-~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i   67 (99)
T 2dnw_A           11 LTLEGIQDRVLYVLKLYDKI-DPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI   67 (99)
T ss_dssp             CCHHHHHHHHHHHHHHCTTS-CTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHhCC-CHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence            56899999999999999999 888999999995 999999999999999999999864

>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}

Probab=99.07  E-value=4.5e-14  Score=98.16  Aligned_cols=62  Identities=8%  Similarity=0.073  Sum_probs=56.7

Q ss_pred             cceeeecCCh--HHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           50 NRFCVSCSAK--PETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        50 ~r~~v~c~ak--~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      .|+.+.|+++  .|+.++|+++|.+.+++ ++++|+++++|.|||+|||+++||++.||++|||+
T Consensus        13 ~~~~~~~~~~M~~ei~~~l~~ila~~l~i-~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~   76 (103)
T 2lte_A           13 GRENLYFQGHMPNDMEDHLLTVLSVASGV-PKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVT   76 (103)
Confidence            5778878874  35999999999999999 78899999999999999999999999999999984

>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1

Probab=99.36  E-value=5e-13  Score=92.87  Aligned_cols=56  Identities=14%  Similarity=0.057  Sum_probs=46.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCC-CCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALP-AETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~-d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ..++++.++|++|+.+.+++. +.++|+++++|.|||+|||++|||++.||++|||+
T Consensus        18 ~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~   74 (105)
T 2jq4_A           18 YFQGHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIE   74 (105)
T ss_dssp             -----CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCC
Confidence            567889999999999987651 47889999999999999999999999999999984

>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*

Probab=99.36  E-value=2.9e-13  Score=88.77  Aligned_cols=54  Identities=13%  Similarity=0.000  Sum_probs=48.9

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCC----ccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAET----ELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~----~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      +++++.++|++++.+++++ ++.    +|+++++|.|||+|||+++|+++.||++|||+
T Consensus         2 ~~~~~~~~l~~il~~~l~~-~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~   59 (86)
T 1af8_A            2 ATLLTTDDLRRALVECAGE-TDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVS   59 (86)
T ss_dssp             CCSSCHHHHHHHHHTTCCC-CSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSC
T ss_pred             chHHHHHHHHHHHHHHhCC-CcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCC
Confidence            3466899999999999999 555    78999999999999999999999999999984

>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A

Probab=99.34  E-value=1.4e-12  Score=83.74  Aligned_cols=53  Identities=19%  Similarity=0.229  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++.++|++++.+.+++ ++++|+++++|. |||+|||+.+|++..||++|||+-
T Consensus         2 ~~i~~~l~~~~~~~l~~-~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i   55 (78)
T 1l0i_A            2 STIEERVKKIIGEQLGV-KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEI   55 (78)
T ss_dssp             CCHHHHHHHHHHHHHTC-CGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             hHHHHHHHHHHHHHhCC-CHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCC
Confidence            46889999999999999 888999999995 999999999999999999999864

>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1

Probab=99.32  E-value=3.1e-12  Score=89.22  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=52.0

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++++.++|++++.+.+++ ++++|+++++|. |||+|||+++|+++.||++|||+-
T Consensus         3 m~~~~i~~~l~~il~~~l~~-~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i   59 (115)
T 1klp_A            3 VTQEEIIAGIAEIIEEVTGI-EPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKI   59 (115)
T ss_dssp             CCHHHHHHHHHHHHHHHTCC-CTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCHHHHHHHHHHHHHHHhCc-CHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCC
Confidence            46789999999999999999 788999999995 999999999999999999999853

>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}

Probab=99.30  E-value=2.9e-12  Score=89.51  Aligned_cols=55  Identities=9%  Similarity=-0.008  Sum_probs=50.3

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCcc------ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKF------SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F------~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+++++.++|+++|++.++  ++.+|+++++|      .|||+|||+++||++.||++|||+-
T Consensus        15 ~~~~~i~~~i~~il~e~l~--~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i   75 (107)
T 3ce7_A           15 TDINAVTNYIVGMCQKFLQ--KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTV   75 (107)
T ss_dssp             TCHHHHHHHHHHHHHTTBC--TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHHHhC--CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCC
Confidence            4678999999999999998  67799999999      5999999999999999999999954

>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1

Probab=99.26  E-value=2.4e-12  Score=83.82  Aligned_cols=53  Identities=17%  Similarity=0.155  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHhCCCCCC-ccC--CCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAET-ELT--SESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~-~It--~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++.++|++++++.+++ ++. +|+  ++++|.|||+|||+.+|++..||++|||+-
T Consensus         3 ~~~~~~l~~~l~~~l~~-~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i   58 (83)
T 1or5_A            3 ALTVDDLKKLLAETAGE-DDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIAL   58 (83)
T ss_dssp             CSCHHHHHHHHHHHSCC-CSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCC
T ss_pred             hHHHHHHHHHHHHHhCC-CcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCcc
Confidence            45789999999999999 655 899  999999999999999999999999999854

>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A

Probab=99.25  E-value=1.1e-11  Score=78.61  Aligned_cols=52  Identities=25%  Similarity=0.347  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++.++|++++.+.+++ ++++++++++| .|||+|||+.++++..||++||++-
T Consensus         1 ~i~~~l~~~~~~~l~~-~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i   53 (77)
T 2ehs_A            1 SLEERVKEIIAEQLGV-EKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEI   53 (77)
T ss_dssp             CHHHHHHHHHHHHHCC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             CHHHHHHHHHHHHhCC-ChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCcc
Confidence            4788999999999999 78899999999 6999999999999999999999863

>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}

Probab=99.23  E-value=5.8e-12  Score=89.54  Aligned_cols=49  Identities=16%  Similarity=0.120  Sum_probs=45.2

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++++++|++||.++++      |+++++|. |||+||||+|||++.||++|||+-
T Consensus        28 ~~ei~~~v~~il~e~l~------I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I   77 (113)
T 2cgq_A           28 EEAINATIQRILRTDRG------ITANQVLVDDLGFDSLKLFQLITELEDEFDIAI   77 (113)
T ss_dssp             HHHHHHHHHHHHTCCSC------CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHhC------CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCc
Confidence            78899999999998876      89999995 999999999999999999999854

>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1

Probab=99.23  E-value=8.1e-12  Score=84.77  Aligned_cols=53  Identities=17%  Similarity=0.061  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHhCCCC---CCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           61 ETVQKVCEIVRRQLALPA---ETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d---~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .++++|+++|.+++++..   +++|+++++|.|||+|||+.+||++.||++|||+.
T Consensus         4 ~t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i   59 (95)
T 1nq4_A            4 LTLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQL   59 (95)
T ss_dssp             CCHHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCS
T ss_pred             ccHHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCcc
Confidence            367899999999999832   23799999999999999999999999999999854

>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}

Probab=99.22  E-value=1.7e-12  Score=83.29  Aligned_cols=53  Identities=19%  Similarity=0.271  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCcc-ccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKF-SALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F-~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +++.++|++++++.+++ ++++|+++++| .|||+|||+.+|++..||++|||+-
T Consensus         3 ~~i~~~l~~~~~~~l~~-~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i   56 (79)
T 2l3v_A            3 SDTAERVKKIVVEHLGV-DADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEI   56 (79)
T ss_dssp             THHHHHHHHHHHHHTCC-CSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHhCC-CHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCC
Confidence            47999999999999999 78899999999 6999999999999999999999853

>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1

Probab=99.21  E-value=1.8e-12  Score=87.10  Aligned_cols=55  Identities=16%  Similarity=0.261  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHHHhCCC-------CCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCCC
Q 033331           60 PETVQKVCEIVRRQLALP-------AETELTSESKFSALGGNSDELRRRIWDWCRRGKLPEH  114 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~-------d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~~  114 (121)
                      +++.++|+++|+++++..       ++++|+++++|.|||+|||+++||++.||++|||+-.
T Consensus         3 ~~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~   64 (92)
T 1fh1_A            3 DQLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIE   64 (92)
T ss_dssp             --CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC------
T ss_pred             hHHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccC
Confidence            367899999999999851       3458999999999999999999999999999999543

>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A

Probab=99.16  E-value=3.4e-11  Score=83.01  Aligned_cols=50  Identities=16%  Similarity=0.068  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           64 QKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        64 ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.|+++|.+.++++++++|+++..|.|||+|||+.|||.+.||++|||+.
T Consensus         9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~l   58 (91)
T 2cg5_B            9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVL   58 (91)
T ss_dssp             TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCC
Confidence            57899999999996668999999999999999999999999999999964

>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}

Probab=99.09  E-value=1.3e-10  Score=75.97  Aligned_cols=55  Identities=22%  Similarity=0.166  Sum_probs=51.1

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ...++.+.|++++.+.+++ +.++|+++++|.|||+|||+.++++..||++||++.
T Consensus         8 ~~~~~~~~l~~~~~~~l~~-~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l   62 (89)
T 2kr5_A            8 VSNEKLDAVMRVVSEESGI-ALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDL   62 (89)
T ss_dssp             CCHHHHHHHHHHHHHHHCC-CGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCC
T ss_pred             ccHHHHHHHHHHHHHHHCc-CHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCC
Confidence            4578999999999999999 788999999999999999999999999999998853

>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A

Probab=99.06  E-value=4.1e-10  Score=72.65  Aligned_cols=56  Identities=11%  Similarity=0.019  Sum_probs=51.3

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ....++.+.|.+++.+.+++ +.++|.++.+|.+||+|||..++++..||++||++.
T Consensus        10 ~~~~~~~~~l~~~~~~~l~~-~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i   65 (88)
T 2afd_A           10 ASVEDIQSWLIDQFAQQLDV-DPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKEL   65 (88)
T ss_dssp             SSHHHHHHHHHHHHHHHHTS-CGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCC
T ss_pred             CCHHHHHHHHHHHHHHHHCc-CHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCc
Confidence            35678999999999999999 788999999999999999999999999999998753

>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*

Probab=98.98  E-value=6.4e-10  Score=73.35  Aligned_cols=56  Identities=20%  Similarity=0.074  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ....++.+.|++++.+.+++ +.++|.++.+|.|||+|||+.++++..||++||++.
T Consensus        17 ~~~~~~~~~l~~~~~~~l~~-~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l   72 (99)
T 2liu_A           17 VNLSEIKQVLKQQLAEALYT-EESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNL   72 (99)
T ss_dssp             CCHHHHHHHHHHHHHHHTTS-CGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCc-CHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCc
Confidence            36788999999999999999 788999999999999999999999999999999853

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=98.91  E-value=1.6e-09  Score=81.40  Aligned_cols=56  Identities=20%  Similarity=0.130  Sum_probs=52.3

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ..+.++.+.|++++.+.+++ ++++|.++.+|.|||+|||+.+|++..||++||++.
T Consensus        22 ~~~~~i~~~l~~~~a~~l~~-~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l   77 (212)
T 2l22_A           22 VADDECAQFLRQSLAAMLYC-EPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKI   77 (212)
T ss_dssp             CCTTHHHHHHHHHHHHHTTC-CTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCc-CHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCC
Confidence            45778999999999999999 788999999999999999999999999999999854

>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A

Probab=98.88  E-value=1.9e-09  Score=71.04  Aligned_cols=55  Identities=18%  Similarity=0.026  Sum_probs=49.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +..+.+.|++++.+.++..+.++|.++.+|.|||+|||..+|++..|+++||++.
T Consensus        18 ~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l   72 (95)
T 2ju1_A           18 TAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRL   72 (95)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCC
Confidence            4568899999999999943788999999999999999999999999999998853

>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A

Probab=98.80  E-value=1.2e-08  Score=68.22  Aligned_cols=53  Identities=19%  Similarity=0.188  Sum_probs=48.5

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ....++.++|++++.+.+++ +  +|.++.+|.+||.|||..++++..|+++||++
T Consensus        10 ~p~~~~e~~l~~i~~~vL~~-~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~   62 (91)
T 1dny_A           10 APTNAVESKLAEIWERVLGV-S--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVE   62 (91)
T ss_dssp             CCSSHHHHHHHHHHHHHHTC-S--SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCC
T ss_pred             CCCCHHHHHHHHHHHHHhCC-C--CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCC
Confidence            44668999999999999998 4  69999999999999999999999999999985

>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}

Probab=98.75  E-value=2.4e-08  Score=66.61  Aligned_cols=52  Identities=17%  Similarity=0.096  Sum_probs=47.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ..++.++|++|+++.+++ +  +|.++.+|.+||.|||..++++..|+++||++.
T Consensus        14 ~~~~e~~l~~i~~~vL~~-~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l   65 (93)
T 4i4d_A           14 RRALERDIAAIWAETLGR-D--SVGPHEDFAALGGNSIHAIXITNRVEELVDAEL   65 (93)
T ss_dssp             HHHHHHHHHHHHHHHHTC-S--CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHHhCC-C--CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCC
Confidence            457899999999999998 3  599999999999999999999999999999853

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=98.69  E-value=3.6e-08  Score=73.94  Aligned_cols=54  Identities=17%  Similarity=0.112  Sum_probs=50.2

Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++.+.|++++.+.+++ +.++|.++.+|.+||+|||+.+|++..||++||++.
T Consensus       128 ~~~i~~~l~~~~~~~l~~-~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l  181 (212)
T 2l22_A          128 RESIQDYLKQSLGELLFL-DPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQL  181 (212)
T ss_dssp             HHHHHHHHHHHHHHHHSS-CSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHCC-ChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCc
Confidence            567889999999999999 888999999999999999999999999999998753

>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A

Probab=98.19  E-value=2.5e-06  Score=66.45  Aligned_cols=54  Identities=15%  Similarity=0.111  Sum_probs=47.9

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +...++.++|++|+++.|++ +.  |..+.+|.+||.|||..++++..|+++||++.
T Consensus         7 ~p~~~~e~~l~~~~~~~l~~-~~--i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~   60 (329)
T 3tej_A            7 APKAGSETIIAAAFSSLLGC-DV--QDADADFFALGGHXLLAMKLAAQLSRQVARQV   60 (329)
T ss_dssp             CCCTTHHHHHHHHHHHHHTC--C--CSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCC
T ss_pred             CCCCHHHHHHHHHHHHHhCC-CC--CCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCC
Confidence            34567899999999999999 44  99999999999999999999999999999853

>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.79  E-value=2.2e-05  Score=55.67  Aligned_cols=52  Identities=19%  Similarity=0.170  Sum_probs=46.5

Q ss_pred             hHHHHHHHHHHHHHHhC-CCCCCccCCCCccccCCCChHHHHHHHHHHHHhcC-CCC
Q 033331           59 KPETVQKVCEIVRRQLA-LPAETELTSESKFSALGGNSDELRRRIWDWCRRGK-LPE  113 (121)
Q Consensus        59 k~et~ekV~~IV~~~l~-l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~-Ip~  113 (121)
                      +.++.++|.+|-.+.|+ +   ..|.++++|.+||.|||..+.++..|.++|+ ++.
T Consensus        23 ~~~~E~~La~iW~~vL~~~---~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l   76 (110)
T 2cq8_A           23 ELVTAEAVRSVWQRILPKV---LEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLEL   76 (110)
T ss_dssp             HHHHHHHHHHHHHHHCSSC---SCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCC
T ss_pred             chHHHHHHHHHHHHHhCCC---CCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCc
Confidence            45699999999999997 5   3599999999999999999999999999998 753

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}

Probab=97.69  E-value=6.5e-05  Score=61.19  Aligned_cols=53  Identities=15%  Similarity=0.206  Sum_probs=48.1

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      +...++.++|++|.++.|++ +  +|..+.+|.+||.|||..+.++..+.++||+.
T Consensus         6 ~p~~~~e~~l~~iw~~vL~~-~--~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~   58 (520)
T 2jgp_A            6 APRSVWEARLAQVWEQVLNV-P--QVGALDDFFALGGHSLRAMRVLSSMHNEYQVD   58 (520)
T ss_dssp             CCCSHHHHHHHHHHHHHHTC-S--CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBC
T ss_pred             CCCCHHHHHHHHHHHHHhCC-C--CCCCCccHHHhcccHHHHHHHHHHHHHHhCCC
Confidence            34568899999999999999 4  59999999999999999999999999999875

>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}

Probab=97.19  E-value=0.00028  Score=55.24  Aligned_cols=48  Identities=13%  Similarity=0.067  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           63 VQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        63 ~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+.+++.+.+.+ + ++++|.++.+|.+||+||+.+|+++..+|++ |++.
T Consensus       217 ~dwlr~~va~~L-~-~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~  264 (287)
T 2fq1_A          217 KAALREVILPLL-D-ESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDI  264 (287)
T ss_dssp             HHHHHHHHGGGC-C-CSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTC
T ss_pred             HHHHHHHHHHHh-C-CHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCC
Confidence            355788888888 7 7788999999999999999999999999998 8754

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}

Probab=96.85  E-value=0.00089  Score=61.49  Aligned_cols=53  Identities=15%  Similarity=0.166  Sum_probs=47.6

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      +...++.++|++|.++.|++ +  +|..+.+|.+||.|||..++++..|+++||++
T Consensus       968 ~p~~~~e~~l~~~~~~vL~~-~--~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~ 1020 (1304)
T 2vsq_A          968 GPRNEMEETIAQIWSEVLGR-K--QIGIHDDFFALGGHALKAMTAASRIKKELGID 1020 (1304)
T ss_dssp             CCSSHHHHHHHHHHHHHHTC-S--CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCC
T ss_pred             CCCChHHHHHHHHHHHHcCC-C--ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCC
Confidence            44568899999999999998 3  59999999999999999999999999999874

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=96.63  E-value=0.00031  Score=57.93  Aligned_cols=52  Identities=21%  Similarity=0.177  Sum_probs=0.0

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      +...++.++|.+|.++.|++ +  +|..+.+|.+||.|||..+.++..|++ ||++
T Consensus        41 ~p~~~~e~~l~~~w~~~l~~-~--~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~   92 (508)
T 4f6l_B           41 EPSNEIEQTFVDVFGEVLKQ-N--DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHH   92 (508)
T ss_dssp             --------------------------------------------------------
T ss_pred             CCCCHHHHHHHHHHHHHhCC-C--CCCCCCChHHcCchHHHHHHHHHHHHH-cCCC
Confidence            34567899999999999998 4  699999999999999999999999985 8763

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.77  E-value=0.0016  Score=64.52  Aligned_cols=51  Identities=16%  Similarity=0.071  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           62 TVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        62 t~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ..+.|.+++.+.|++++.++|.++.+|.|||.|||..|||...|+++||++
T Consensus      2124 ~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~ 2174 (2512)
T 2vz8_A         2124 SQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLV 2174 (2512)
T ss_dssp             ---------------------------------------------------
T ss_pred             hHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCc
Confidence            346789999999999556789999999999999999999999999999874

>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*

Probab=95.70  E-value=0.0018  Score=55.18  Aligned_cols=52  Identities=13%  Similarity=-0.005  Sum_probs=0.0

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHH-hcCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCR-RGKLP  112 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEd-eF~Ip  112 (121)
                      ...++.++|++|.++.|++ +  .+..+.+|.+||.|||..+.++-.|++ +||+.
T Consensus       521 ~~~~~e~~l~~iw~~vL~~-~--~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~  573 (620)
T 4dg8_A          521 ALDPDQRGCAQLWSELLGC-E--VGAADQDFFLCGGNSLLALQLVALCQSAGAGAN  573 (620)
T ss_dssp             --------------------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHhCC-C--CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCC
Confidence            3456788899999999988 3  478889999999999999999999998 78763

>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}

Probab=95.06  E-value=0.017  Score=48.60  Aligned_cols=48  Identities=13%  Similarity=0.098  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKL  111 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~I  111 (121)
                      ++.+.+.+++.+.++.  ..++..+.+|.+||.|||..+.++-.|++ +++
T Consensus       545 ~~~~~l~~~~~~~l~~--~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~  592 (617)
T 3rg2_A          545 ASKAALREVILPLLDE--SDEPFDDDNLIDYGLDSVRMMALAARWRK-VHG  592 (617)
T ss_dssp             CSHHHHHHHHGGGSCT--TCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TST
T ss_pred             ccHHHHHHHHHHHhcc--CCCCCCCCChhhcCccHHHHHHHHHHHHH-hcC
Confidence            4567888999888864  34688899999999999999999999987 454

>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1

Probab=90.79  E-value=0.21  Score=29.49  Aligned_cols=22  Identities=9%  Similarity=-0.028  Sum_probs=18.5

Q ss_pred             ChHHHHHHHHHHHHhcCCCCCC
Q 033331           94 NSDELRRRIWDWCRRGKLPEHH  115 (121)
Q Consensus        94 DSLD~VEIVm~LEdeF~Ip~~~  115 (121)
                      .=|++.|++-.||++|||+..+
T Consensus        14 TvlE~~eLvk~leekfGVsaaa   35 (40)
T 1dd4_C           14 TVSELAELVKKLEDKFGVTAAA   35 (40)
T ss_dssp             CHHHHHHHHHHHHHHTCCCSCC
T ss_pred             cHHHHHHHHHHHHHHHCCCccc
Confidence            3478899999999999998643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=84.33  E-value=0.19  Score=51.29  Aligned_cols=52  Identities=8%  Similarity=0.125  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHhCCCCCCccCCCCccccC-CCChHHHHHHHHHHHHhcCC--CCC
Q 033331           62 TVQKVCEIVRRQLALPAETELTSESKFSAL-GGNSDELRRRIWDWCRRGKL--PEH  114 (121)
Q Consensus        62 t~ekV~~IV~~~l~l~d~~~It~eS~F~DL-GaDSLD~VEIVm~LEdeF~I--p~~  114 (121)
                      ..+.|..||...++. ..++|.++.++.+| |.+|.-..||++.|+.|||+  |+.
T Consensus      1795 a~~~~~~liA~~~k~-~~~~i~~~~~i~~L~gg~St~~nell~dl~~efg~~~p~~ 1849 (3089)
T 3zen_D         1795 AADATVALIALSAKM-RIDQIEALDSIESITDGASSRRNQLLVDLGSELNLGAIDG 1849 (3089)
T ss_dssp             --------------------------------------------------------
T ss_pred             HHHHHHHHHHHHhCC-ChhHCCccccHHHHhCCchHHHHHHHHHHHHHhCCCCCCc
Confidence            467799999999998 88899999999988 99999999999999999986  655

>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C

Probab=82.83  E-value=0.88  Score=25.22  Aligned_cols=16  Identities=13%  Similarity=-0.055  Sum_probs=14.2

Q ss_pred             hHHHHHHHHHHHHhcC
Q 033331           95 SDELRRRIWDWCRRGK  110 (121)
Q Consensus        95 SLD~VEIVm~LEdeF~  110 (121)
                      =|.+.|+|-++|++||
T Consensus        15 vlEl~eLvk~lEe~fG   30 (30)
T 1zav_U           15 VSELAELVKKLEDKFG   30 (30)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            3788999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	121
d1f80d_	74	a.28.1.1 (D:) Acyl carrier protein {Bacillus subti	0.004

>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} Length = 74

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Bacillus subtilis [TaxId: 1423]

 Score = 31.7 bits (72), Expect = 0.004
 Identities = 6/28 (21%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 61 ETVQKVCEIVRRQLALPAETELTSESKF 88
          +T+++V +I+  +L +    ++  E+ F
Sbjct: 3  DTLERVTKIIVDRLGVDEA-DVKLEASF 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1f80d_	74	Acyl carrier protein {Bacillus subtilis [TaxId: 14	99.55
d1t8ka_	77	Acyl carrier protein {Escherichia coli [TaxId: 562	99.54
d1vkua_	85	Acyl carrier protein {Thermotoga maritima [TaxId:	99.38
d1klpa_	115	Acyl carrier protein {Mycobacterium tuberculosis [	99.31
d1dv5a_	80	apo-D-alanyl carrier protein {Lactobacillus casei	99.31
d2jq4a1	83	Hypothetical protein Atu2571 {Agrobacterium tumefa	99.14
d1nq4a_	95	Oxytetracycline polyketide synthase acyl carrier {	99.13
d1or5a_	82	Frenolicin polyketide synthase acyl carrier protei	99.09
d2af8a_	86	Actinorhodin polyketide synthase acyl carrier prot	99.0
d2pnga1	76	Type I fatty acid synthase ACP domain {Rat (Rattus	98.94
d2gdwa1	76	Peptidyl carrier protein (PCP), thioester domain {	98.71
d2gyc31	47	Ribosomal protein L7/12, oligomerisation (N-termin	93.16
d1dd3a1	57	Ribosomal protein L7/12, oligomerisation (N-termin	81.52

>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Bacillus subtilis [TaxId: 1423]

Probab=99.55  E-value=3.3e-15  Score=96.46  Aligned_cols=53  Identities=17%  Similarity=0.335  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        60 ~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .|++++|++||++++++ ++++|+++++|. |||+|||+.+|+++.||++|||+.
T Consensus         2 ~dv~~~v~~iia~~l~~-~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i   55 (74)
T d1f80d_           2 ADTLERVTKIIVDRLGV-DEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEI   55 (74)
T ss_dssp             CHHHHHHHHHHHHHSSC-CSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             hHHHHHHHHHHHHHHCc-CHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCC
Confidence            47999999999999999 899999999997 899999999999999999999864

>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=4.1e-15  Score=96.78  Aligned_cols=52  Identities=19%  Similarity=0.231  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        61 et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      ++.++|++||++++++ ++++|+++++|. |||+|||+++||++.+|++|||+-
T Consensus         2 ~I~~~v~~iia~~l~i-~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i   54 (77)
T d1t8ka_           2 TIEERVKKIIGEQLGV-KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEI   54 (77)
T ss_dssp             CHHHHHHHHHHHHHTC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             cHHHHHHHHHHHHHCC-CHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCC
Confidence            4789999999999999 999999999998 899999999999999999999964

>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Thermotoga maritima [TaxId: 2336]

Probab=99.38  E-value=4e-13  Score=87.40  Aligned_cols=55  Identities=16%  Similarity=0.179  Sum_probs=52.0

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      ..++++.++|++|+++.+++ ++++|.++++|.|||+|||+.++|+..||++||+.
T Consensus         4 m~~~~i~~~l~~iv~~~l~~-~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~   58 (85)
T d1vkua_           4 MERKKLIAKFVEIASEKMGK-DLETVDEENTFKELGFDSIDVIDLVMFFEDEFALR   58 (85)
T ss_dssp             THHHHHHHHHHHHHHHTTCC-CCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHHHHHHHCC-CHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCC
Confidence            35789999999999999999 88899999999999999999999999999999985

>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.31  E-value=1.7e-12  Score=89.01  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccc-cCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~-DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+++++.++|++||++.+|+ ++++|+++++|. |||+|||+.++|+..||++||++.
T Consensus         3 ~t~~~i~~~l~~iv~~~l~~-~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i   59 (115)
T d1klpa_           3 VTQEEIIAGIAEIIEEVTGI-EPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKI   59 (115)
T ss_dssp             CCHHHHHHHHHHHHHHHTCC-CTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCC-CccccCcccchhhhcccchhHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999 999999999997 899999999999999999999854

>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: apo-D-alanyl carrier protein
domain: apo-D-alanyl carrier protein
species: Lactobacillus casei [TaxId: 1582]

Probab=99.31  E-value=2.4e-12  Score=83.84  Aligned_cols=61  Identities=8%  Similarity=-0.042  Sum_probs=53.9

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCcccc-CCCChHHHHHHHHHHHHhcCC--CCCCCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSA-LGGNSDELRRRIWDWCRRGKL--PEHHNGPR  119 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~D-LGaDSLD~VEIVm~LEdeF~I--p~~~~~p~  119 (121)
                      |.+++.++|++|+++.++. ++.+++++++|.| +|+|||+.+|++..||++|||  |..+++|+
T Consensus         1 s~e~I~~~v~~il~~~l~~-~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~   64 (80)
T d1dv5a_           1 ADEAIKNGVLDILADLTGS-DDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRK   64 (80)
T ss_dssp             CCHHHHHHHHHHHHHHHTS-SSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTT
T ss_pred             ChHHHHHHHHHHHHHHhcc-chhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHH
Confidence            4678999999999999999 8889999999995 569999999999999999987  66666654

>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Hypothetical protein Atu2571
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.14  E-value=1.8e-11  Score=79.77  Aligned_cols=50  Identities=16%  Similarity=0.094  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHhCCC-CCCccCCCCccccCCCChHHHHHHHHHHHHhcCCC
Q 033331           63 VQKVCEIVRRQLALP-AETELTSESKFSALGGNSDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        63 ~ekV~~IV~~~l~l~-d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip  112 (121)
                      .++|++++++.+++. ++++|+++++|.|||+|||+.+|++..||++|||+
T Consensus         2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~   52 (83)
T d2jq4a1           2 NATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIE   52 (83)
T ss_dssp             HHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHccCCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCC
Confidence            478999999986552 67889999999999999999999999999999874

>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Oxytetracycline polyketide synthase acyl carrier
species: Streptomyces rimosus [TaxId: 1927]

Probab=99.13  E-value=1.7e-11  Score=82.34  Aligned_cols=56  Identities=14%  Similarity=0.036  Sum_probs=50.6

Q ss_pred             CChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        57 ~ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+.+++++.|++++.+.+++ +.++|+++++|.|||+|||+.+||+..||++||++.
T Consensus         4 ~t~d~l~~~lre~~~~~~~~-~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l   59 (95)
T d1nq4a_           4 LTLSDLLTLLRECAGEEESI-DLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQL   59 (95)
T ss_dssp             CCHHHHHHHHHHHHTCSSTT-CSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCS
T ss_pred             cCHHHHHHHHHHHHhHHhCC-ChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCC
Confidence            35678888888888888899 999999999999999999999999999999999753

>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP
species: Streptomyces roseofulvus [TaxId: 33902]

Probab=99.09  E-value=3.2e-11  Score=79.40  Aligned_cols=52  Identities=15%  Similarity=0.068  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHhCCCCCC--ccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           62 TVQKVCEIVRRQLALPAET--ELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        62 t~ekV~~IV~~~l~l~d~~--~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      |+++|+++|++++|..+..  ++.++++|.|||+|||+.+|++..||++||++.
T Consensus         4 T~e~l~~il~e~~g~~~~~~~~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l   57 (82)
T d1or5a_           4 TVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIAL   57 (82)
T ss_dssp             CHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCC
T ss_pred             cHHHHHHHHHHHhCCCcccccCCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcC
Confidence            5789999999999873332  467788999999999999999999999999864

>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP
species: Streptomyces coelicolor, A3(2) [TaxId: 1902]

Probab=99.00  E-value=5.7e-11  Score=78.28  Aligned_cols=51  Identities=12%  Similarity=-0.016  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHh----CCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           62 TVQKVCEIVRRQL----ALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        62 t~ekV~~IV~~~l----~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++|+++|++++    ++ ++++|+++++|.|||+|||+.++++..||++||++.
T Consensus         6 t~d~l~~~l~e~~~~~~g~-~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l   60 (86)
T d2af8a_           6 TTDDLRRALVECAGETDGT-DLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSI   60 (86)
T ss_dssp             CHHHHHHHHHHTTCCCSCC-CCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCC
T ss_pred             cHHHHHHHHHHHHccccCC-CccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCc
Confidence            4566666666655    56 778999999999999999999999999999998843

>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Type I fatty acid synthase ACP domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.94  E-value=4.8e-11  Score=77.26  Aligned_cols=52  Identities=15%  Similarity=0.031  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           62 TVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        62 t~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      +.++|.+++++.++++++++|+++.+|.|||+|||..+|++..||++||++.
T Consensus         5 ~e~~l~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l   56 (76)
T d2pnga1           5 AQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVL   56 (76)
T ss_dssp             CCCCGGGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCC
Confidence            4456788999999997789999999999999999999999999999999853

>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Peptidyl carrier domain
domain: Peptidyl carrier protein (PCP), thioester domain
species: Bacillus brevis [TaxId: 1393]

Probab=98.71  E-value=1.8e-08  Score=64.66  Aligned_cols=53  Identities=19%  Similarity=0.164  Sum_probs=48.2

Q ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccCCCCccccCCCChHHHHHHHHHHHHhcCCCC
Q 033331           58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGGNSDELRRRIWDWCRRGKLPE  113 (121)
Q Consensus        58 ak~et~ekV~~IV~~~l~l~d~~~It~eS~F~DLGaDSLD~VEIVm~LEdeF~Ip~  113 (121)
                      .+.++.++|.+|.++.|++ +  .|.++.+|.|+|.|||..++++-.|+++||++.
T Consensus         4 P~~~~E~~l~~i~~~vL~~-~--~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l   56 (76)
T d2gdwa1           4 PTNAVESKLAEIWERVLGV-S--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVEL   56 (76)
T ss_dssp             CCSHHHHHHHHHHHHHTTS-S--CCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCC
T ss_pred             cCCHHHHHHHHHHHHHcCC-C--CCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCC
Confidence            3568999999999999998 4  489999999999999999999999999999864

>d2gyc31 a.108.1.1 (3:2-48) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
domain: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
species: Escherichia coli [TaxId: 562]

Probab=93.16  E-value=0.028  Score=33.06  Aligned_cols=19  Identities=5%  Similarity=-0.132  Sum_probs=17.0

Q ss_pred             HHHHHHHHHHHHhcCCCCC
Q 033331           96 DELRRRIWDWCRRGKLPEH  114 (121)
Q Consensus        96 LD~VEIVm~LEdeF~Ip~~  114 (121)
                      +|+||+|-++||+||+.-.
T Consensus        16 mdvveLi~amEEKFGVsaa   34 (47)
T d2gyc31          16 MDVVELISAMEEKFGVSAA   34 (47)
T ss_dssp             HHHHHHHHHHHHHTCTTTT
T ss_pred             HHHHHHHHHHHHHhCcchh
Confidence            7899999999999999654

>d1dd3a1 a.108.1.1 (A:1-57) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
domain: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.52  E-value=0.31  Score=29.47  Aligned_cols=18  Identities=11%  Similarity=-0.014  Sum_probs=15.8

Q ss_pred             hHHHHHHHHHHHHhcCCC
Q 033331           95 SDELRRRIWDWCRRGKLP  112 (121)
Q Consensus        95 SLD~VEIVm~LEdeF~Ip  112 (121)
                      =+.+.|+|-+|||+||+.
T Consensus        15 v~El~ELvKalEekfGVs   32 (57)
T d1dd3a1          15 VSELAELVKKLEDKFGVT   32 (57)
T ss_dssp             HHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHHhCcc
Confidence            378899999999999973