Citrus Sinensis ID: 033401

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE
Secondary Structure (PSIPRED)
ccccHHcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccEEEccHHHHHccccccccccccHHHHcccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msgteevkdqemvdgnapeesqktmpssEEEEAALKKKyggivpkkppliskdherayfdsadwalgkqqgvekpkgplealrpklqptqqqtryrkspyapaggedggsappedatane
Flexible Loop (DISEMBL)
msgteevkdqemvdgnapeesqktmpssEEEEAALKkkyggivpkkpplisKDHERAYFDSADWALGKQQGVEkpkgplealrpklqptqqqtryrkspyapaggedggsappedatane
Low Complexity Region (SEG)
MSGTEEVKDQEMVDGNAPEESQKTMPsseeeeaaLKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE
Disordered region (IsUnstruct)
*********************************************************YFDSADW********************************************************
Disordered Region (DISOPRED)
***************************************************KDHERAYFDSADWA*******************************************************
Disordered Region (DISEMBL)
***********************************KKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGVEKPKGPLEALRPKL**********************************
Disordered Region (DISPRO)
******************************EEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQ**************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
225453078	116	PREDICTED: uncharacterized protein LOC10	0.958	0.991	0.801	1e-46
224120740	115	predicted protein [Populus trichocarpa]	0.908	0.947	0.819	5e-43
147860363	110	hypothetical protein VITISV_013098 [Viti	0.875	0.954	0.820	5e-43
224119264	114	predicted protein [Populus trichocarpa]	0.908	0.956	0.810	5e-43
297797425	118	hypothetical protein ARALYDRAFT_496610 [	0.975	0.991	0.75	9e-42
449445951	117	PREDICTED: uncharacterized protein LOC10	0.966	0.991	0.743	7e-41
18424791	115	cAMP-regulated phosphoprotein 19-related	0.95	0.991	0.733	2e-40
358248730	117	uncharacterized protein LOC100817767 [Gl	0.975	1.0	0.725	2e-38
357451455	117	hypothetical protein MTR_2g064890 [Medic	0.975	1.0	0.733	2e-38
356556947	117	PREDICTED: uncharacterized protein LOC10	0.975	1.0	0.725	2e-38

>gi|225453078|ref|XP_002270339.1| PREDICTED: uncharacterized protein LOC100241624 [Vitis vinifera] gi|296087204|emb|CBI33578.3| unnamed protein product [Vitis vinifera]

 Score =  189 bits (481), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 104/116 (89%), Gaps = 1/116 (0%)

Query: 5   EEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADW 64
           E V+  E VDGN P+ ++K+MPSS+EEEAA+KK+YGGI+PKKPPLISKDHERAYFDSADW
Sbjct: 2   ENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFDSADW 61

Query: 65  ALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
           ALGK QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAP+ GEDGGS+P ED   NE
Sbjct: 62  ALGK-QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGEDGGSSPAEDMATNE 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120740|ref|XP_002330940.1| predicted protein [Populus trichocarpa] gi|118483473|gb|ABK93635.1| unknown [Populus trichocarpa] gi|118483822|gb|ABK93803.1| unknown [Populus trichocarpa] gi|222873134|gb|EEF10265.1| predicted protein [Populus trichocarpa]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 91/111 (81%), Positives = 99/111 (89%), Gaps = 2/111 (1%)

Query: 10  QEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQ 69
           QE V+GN  E+ +  MPS ++EE A+KKKYGGI+PKKPPLISKDHERA+FDSADWALGKQ
Sbjct: 7   QEQVNGNLSED-KSCMPSYKQEEEAVKKKYGGIMPKKPPLISKDHERAFFDSADWALGKQ 65

Query: 70  QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
            G EKPKGPLEALRPKLQPTQQQTRYRKSPYAPA GEDGGSAP EDATANE
Sbjct: 66  -GAEKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDGGSAPSEDATANE 115

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860363|emb|CAN80447.1| hypothetical protein VITISV_013098 [Vitis vinifera]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/106 (82%), Positives = 97/106 (91%), Gaps = 1/106 (0%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MSG E V+  E VDGN P+ ++K+MPSS+EEEAA+KK+YGGI+PKKPPLISKDHERAYFD
Sbjct: 1   MSGMENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFD 60

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGE 106
           SADWALGK QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAP+ GE
Sbjct: 61  SADWALGK-QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGE 105

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119264|ref|XP_002331268.1| predicted protein [Populus trichocarpa] gi|118485324|gb|ABK94521.1| unknown [Populus trichocarpa] gi|222873693|gb|EEF10824.1| predicted protein [Populus trichocarpa]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 90/111 (81%), Positives = 99/111 (89%), Gaps = 2/111 (1%)

Query: 10  QEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQ 69
           Q+ VDGN  E+ + +MPSS++EE  +KKKYGGI+PKKPPLISKDHERAYFDSADWALGKQ
Sbjct: 6   QDQVDGNLSED-KSSMPSSKQEEEVVKKKYGGILPKKPPLISKDHERAYFDSADWALGKQ 64

Query: 70  QGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
            GV+KPKGPLEALRPKLQPTQQQTRYRKSPYAPA GED GSA  EDATANE
Sbjct: 65  -GVDKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDAGSASSEDATANE 114

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797425|ref|XP_002866597.1| hypothetical protein ARALYDRAFT_496610 [Arabidopsis lyrata subsp. lyrata] gi|297312432|gb|EFH42856.1| hypothetical protein ARALYDRAFT_496610 [Arabidopsis lyrata subsp. lyrata]

 Score =  173 bits (439), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 103/120 (85%), Gaps = 3/120 (2%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MS  E+VK+Q  V GN   E++K+MPSS++EEAA+KKKYGG++PKKPPLISKDHERAYFD
Sbjct: 1   MSSAEDVKEQS-VQGNLTNEAEKSMPSSQQEEAAVKKKYGGLMPKKPPLISKDHERAYFD 59

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPA-GGEDGGSAPPEDATAN 119
           SADWALGK QGV KPKGPLEALRPKLQPTQQQTRYRKSP AP+ GGEDGG+A  E  + N
Sbjct: 60  SADWALGK-QGVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 118

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445951|ref|XP_004140735.1| PREDICTED: uncharacterized protein LOC101206373 isoform 1 [Cucumis sativus]

 Score =  171 bits (432), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/117 (74%), Positives = 99/117 (84%), Gaps = 1/117 (0%)

Query: 4   TEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSAD 63
           +E +K+ E V G+    S+++M SS +EE  +KKKYGGIVPKKPPLISKDHERAYFDSAD
Sbjct: 2   SEHIKEAERVGGDGHVGSEESMSSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSAD 61

Query: 64  WALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
           WALGK QGVEKPKGPLEALRPKLQPTQQQTRYRKSP AP+ GEDGG+A  E AT+NE
Sbjct: 62  WALGK-QGVEKPKGPLEALRPKLQPTQQQTRYRKSPCAPSDGEDGGTAQNEYATSNE 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424791|ref|NP_568985.1| cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana] gi|16648718|gb|AAL25551.1| AT5g64130/MHJ24_11 [Arabidopsis thaliana] gi|20453353|gb|AAM19915.1| AT5g64130/MHJ24_11 [Arabidopsis thaliana] gi|21618212|gb|AAM67262.1| unknown [Arabidopsis thaliana] gi|332010460|gb|AED97843.1| cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/120 (73%), Positives = 101/120 (84%), Gaps = 6/120 (5%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MS  E+VK+Q    GN   E++K+MPSS++EEA +KKKYGG++PKKPPLISKDHERAYFD
Sbjct: 1   MSSAEDVKEQ----GNLTNEAEKSMPSSQQEEAVVKKKYGGLMPKKPPLISKDHERAYFD 56

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPA-GGEDGGSAPPEDATAN 119
           SADWALGK QGV KPKGPLEALRPKLQPTQQQTRYRKSP AP+ GGEDGG+A  E  + N
Sbjct: 57  SADWALGK-QGVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 115

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248730|ref|NP_001240186.1| uncharacterized protein LOC100817767 [Glycine max] gi|255627847|gb|ACU14268.1| unknown [Glycine max]

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 101/120 (84%), Gaps = 3/120 (2%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MS  EE KD   +D +A +ES   MPS +++E ++KKKYGG++PKKPPLISKDHERAYFD
Sbjct: 1   MSNIEENKDLGQMDVDASDES-ANMPSPQKQEESVKKKYGGMLPKKPPLISKDHERAYFD 59

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
           SADWALGKQ G EKPKGPLEALRPKLQPTQQQTRYRKSPYAP+ GE+GGS P EDA +N+
Sbjct: 60  SADWALGKQGG-EKPKGPLEALRPKLQPTQQQTRYRKSPYAPS-GEEGGSVPAEDAPSNQ 117

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451455|ref|XP_003596004.1| hypothetical protein MTR_2g064890 [Medicago truncatula] gi|217075588|gb|ACJ86154.1| unknown [Medicago truncatula] gi|355485052|gb|AES66255.1| hypothetical protein MTR_2g064890 [Medicago truncatula] gi|388494902|gb|AFK35517.1| unknown [Medicago truncatula]

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/120 (73%), Positives = 98/120 (81%), Gaps = 3/120 (2%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MS  E+ KD   +D +A + S   MPS +++E  LKKKYGGIVPKKPPLISKDHERAYFD
Sbjct: 1   MSNIEDSKDIGQMDVDASDGSV-NMPSPQKQEETLKKKYGGIVPKKPPLISKDHERAYFD 59

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
           SADWALGKQ G  KPKGPLEALRPKLQPTQQQTRYRKSPYAP+ GE+GGS P EDA +NE
Sbjct: 60  SADWALGKQGG-SKPKGPLEALRPKLQPTQQQTRYRKSPYAPS-GEEGGSVPSEDAASNE 117

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556947|ref|XP_003546781.1| PREDICTED: uncharacterized protein LOC100779452 [Glycine max]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 100/120 (83%), Gaps = 3/120 (2%)

Query: 1   MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD 60
           MS  EE K    +D NA ++S   MPSS+++E A+KKKYGG++PKKPPLISKDHERAYFD
Sbjct: 1   MSNIEENKYLGQMDVNASDKS-ANMPSSQKQEEAVKKKYGGMLPKKPPLISKDHERAYFD 59

Query: 61  SADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE 120
           SADWALGKQ G +KPKGPLEALRPKLQPTQQQTRYRKSPYAP+ GE+GGS P ED  +NE
Sbjct: 60  SADWALGKQGG-DKPKGPLEALRPKLQPTQQQTRYRKSPYAPS-GEEGGSVPAEDVPSNE 117

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:2164376	140	AT5G64130 "AT5G64130" [Arabido	0.566	0.485	0.8	9.3e-38
TAIR|locus:2007191	137	AT1G69510 "AT1G69510" [Arabido	0.933	0.817	0.558	1.7e-27
TAIR|locus:505006476	102	AT4G16146 "AT4G16146" [Arabido	0.583	0.686	0.513	1.3e-13

TAIR|locus:2164376 AT5G64130 "AT5G64130" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 56/70 (80%), Positives = 61/70 (87%)

Query:    51 SKDHERAYFDSADWALGKQQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPA-GGEDGG 109
             ++DHERAYFDSADWALGKQ GV KPKGPLEALRPKLQPTQQQTRYRKSP AP+ GGEDGG
Sbjct:    72 NQDHERAYFDSADWALGKQ-GVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGG 130

Query:   110 SAPPEDATAN 119
             +A  E  + N
Sbjct:   131 AAQAEGGSGN 140

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2007191 AT1G69510 "AT1G69510" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 67/120 (55%), Positives = 84/120 (70%)

Query:     5 EEVKDQEMVDGNAPEESQKTMPXXXXXXXXLKKKYGGIVPKKPPLISKDHERAYFDSADW 64
             E+VK +E++D +AP ++ K           +KKKYGG++PKK PLISKDHERA+FDSADW
Sbjct:     2 EDVKGKEIID-DAPIDN-KVSDEMESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADW 59

Query:    65 ALGKQQGVEKPKGPLEALRPKLQPT-QQQTRYRKSPYAPAGGED----GGSAPPEDATAN 119
             ALGKQ+G +KPKGPLEALRPKLQPT QQQ R R+  Y+    ED       AP + A A+
Sbjct:    60 ALGKQKG-QKPKGPLEALRPKLQPTPQQQPRARRMAYSSGETEDTEIDNNEAPDDQACAS 118

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006476 AT4G16146 "AT4G16146" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 37/72 (51%), Positives = 48/72 (66%)

Query:    38 KYGGIVPKKPPLISKDHERAYFDSADWALGKQQGV--EKPKGPLEALRPKLQPTQQQTRY 95
             KYGG+VPKK PLISKD +RA+FDSADWAL KQ+    ++    +E LRPKLQ T ++   
Sbjct:    25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIEKLRPKLQRTPRKQLS 84

Query:    96 RKSPYAPAGGED 107
              + P    G E+
Sbjct:    85 PRRPTCATGNEN 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.128   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120       112   0.00091  102 3  11 23  0.48    31
                                                     29  0.43    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  527 (56 KB)
  Total size of DFA:  115 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.84u 0.24s 14.08t   Elapsed:  00:00:00
  Total cpu time:  13.84u 0.24s 14.08t   Elapsed:  00:00:00
  Start:  Sat May 11 02:02:23 2013   End:  Sat May 11 02:02:23 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0007623 "circadian rhythm" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	120
pfam04667	87	pfam04667, Endosulfine, cAMP-regulated phosphoprot	2e-21

>gnl|CDD|147027 pfam04667, Endosulfine, cAMP-regulated phosphoprotein/endosulfine conserved region

 Score = 81.0 bits (200), Expect = 2e-21
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 22  QKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGV--EKPKGPL 79
              + S   +E  +KKKYG + PKK PL  K  ER YFDS D+AL K  G   + PKGPL
Sbjct: 1   NIDLSSLSPQELKIKKKYGKLPPKKDPLQKKLQERKYFDSGDYALAKAGGSTSQDPKGPL 60

Query: 80  EALRPKLQPTQ--QQTRYRKSPYAPAG 104
             LRPKLQ     +++  R+     A 
Sbjct: 61  GGLRPKLQNPPQLKESIARRRTSGSAA 87

Conserved region found in both cAMP-regulated phosphoprotein 19 (ARPP-19) and Alpha/Beta endosulfine. No function has yet been assigned to ARPP-19. Endosulfine is the endogenous ligand for the ATP-dependent potassium (K ATP) channels which occupy a key position in the control of insulin release from the pancreatic beta cell by coupling cell polarity to metabolism. In both cases the region occupies the majority of the protein. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
PF04667	86	Endosulfine: cAMP-regulated phosphoprotein/endosul	99.92
KOG4076	121	consensus Regulator of ATP-sensitive K+ channels A	99.8

>PF04667 Endosulfine: cAMP-regulated phosphoprotein/endosulfine conserved region; InterPro: IPR006760 This endosulphine family includes cAMP-regulated phosphoprotein 19 (ARPP-19), alpha endosulphine and protein Igo1

Probab=99.92  E-value=9.8e-26  Score=158.30  Aligned_cols=81  Identities=37%  Similarity=0.505  Sum_probs=70.9

Q ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCCcccccccccccccchhhHhhhhcCCCC-CCCCccccCCCCCCCc--ccCCCCCCC
Q 033401           23 KTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQQGVEK-PKGPLEALRPKLQPTQ--QQTRYRKSP   99 (120)
Q Consensus        23 ~~~~s~~~eE~kl~~KYG~L~pKk~~Li~K~~eRKYFDSgDyAL~Kq~g~~k-~~~~vE~L~pKlqpTp--q~lp~Rk~s   99 (120)
                      ++++.+++||++|++|||+|++++.+|++|+++|||||||||||+||++.+. ...+++.+.|++.+|+  ++++.|++.
T Consensus         2 ~~~~~~~~eE~kl~~kYG~l~~~~~~L~kkl~~rKYFDSgDyam~Ka~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~   81 (86)
T PF04667_consen    2 VDISSLSEEEAKLKAKYGKLPPKKKLLQKKLQKRKYFDSGDYAMAKAGKKSSQGPGPTGKLPPPLPNPPHVSQSIPRRPT   81 (86)
T ss_pred             cccccccHHHHHHHHHcCCCCCCchhhhhhhccccccchHHHHHHHhhcccccCcCcCcCCCCCCCCCcccccccCCCCC
Confidence            5789999999999999999999988999999999999999999999955443 2347889999999998  699999999


Q ss_pred             CcCC
Q 033401          100 YAPA  103 (120)
Q Consensus       100 ~~~s  103 (120)
                      |.+.
T Consensus        82 ~~s~   85 (86)
T PF04667_consen   82 TTSP   85 (86)
T ss_pred             CCCC
Confidence            8764

No function has yet been assigned to ARPP-19 []. Endosulphine is the endogenous ligand for the ATP-dependent potassium channels which occupy a key position in the control of insulin release from the pancreatic beta cell by coupling cell polarity to metabolism []. Igo1 is required for initiation of G0 program. In the absence of stimulatory signals, cells may enter into a reversible quiescence (or G0) state that is typically characterised by low metabolic activity, including low rates of protein synthesis and transcription. Igo proteins associate with the mRNA decapping activator Dhh1, sheltering newly expressed mRNAs from degradation via the 5'-3' mRNA decay pathway, and thereby enabling their proper translation during initiation of the G0 program [].

>KOG4076 consensus Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.80  E-value=3.8e-20  Score=137.98  Aligned_cols=83  Identities=22%  Similarity=0.254  Sum_probs=66.2

Q ss_pred             CCCCCCCHHHHHHHHHHhCCCCCCCCccccccc-ccccccchhhHhhhhcCCCCC--CCCcc--cc-CCCCCCCcccCCC
Q 033401           22 QKTMPSSEEEEAALKKKYGGIVPKKPPLISKDH-ERAYFDSADWALGKQQGVEKP--KGPLE--AL-RPKLQPTQQQTRY   95 (120)
Q Consensus        22 ~~~~~s~~~eE~kl~~KYG~L~pKk~~Li~K~~-eRKYFDSgDyAL~Kq~g~~k~--~~~vE--~L-~pKlqpTpq~lp~   95 (120)
                      ..+...+.++|.++++.||+|+-++.+|.+|++ +|||||||||||.||+++++.  ++...  .+ +..++|||+.+|.
T Consensus        25 ~~~ek~~epkl~~ky~~~GklP~~sd~l~krlQkgrKyFDSGDYam~KAk~~~~~~~~~~~~k~~~~t~~~~~~~e~~p~  104 (121)
T KOG4076|consen   25 TSPEKKEEPKLKKKYPSYGKLPGGSDFLRKRLQKGRKYFDSGDYAMAKAKMKNKQLPTANPDKNNLPTGDHIPTPEDLPA  104 (121)
T ss_pred             cChhhhhCHHHHHHHHHhCCCCcccHHHHHHHHhcccccccchHHHHHhhcccccCCccccccCCCCCCCCCcCcccccc
Confidence            444556667788888899999999889999986 699999999999999766543  22211  33 7899999999999


Q ss_pred             CCCCCcCCC
Q 033401           96 RKSPYAPAG  104 (120)
Q Consensus        96 Rk~s~~~s~  104 (120)
                      ||+++++..
T Consensus       105 rk~S~~s~~  113 (121)
T KOG4076|consen  105 RKPSLVSPS  113 (121)
T ss_pred             ccccccCCC
Confidence            999998853

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00