Citrus Sinensis ID: 033493

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MDDFSDSVSTTSSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mddfsdsvsttsssssssssssiitnfPLISAFVAFTIAQCAKFFTAWYKERRWDLKQligsggmpsshsATVTALAMAVgfqegfggplFATALILACVVMYDATGVRLQAGRQAEV
Flexible Loop (DISEMBL)
mddfsdsvsttsssssssssssiITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV
Low Complexity Region (SEG)
MDDFsdsvsttsssssssssssIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV
Disordered region (IsUnstruct)
**********************IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGM***HSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRL********
Disordered Region (DISOPRED)
*********************SIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAG*****
Disordered Region (DISEMBL)
**********************IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV
Disordered Region (DISPRO)
**************SSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAG*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDDFSDSVSTTSSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
O32107	158	Uncharacterized membrane	yes	no	0.822	0.613	0.453	4e-17

>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 57/97 (58%)

Query: 22  SIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVG 81
            ++TNFPL+S+  A   AQ  K    +   R+ D   +  +GGMPSSHSA VTAL+  V 
Sbjct: 2   ELLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVA 61

Query: 82  FQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
            + G    LFA + I A + M+DATGVR  AG QA V
Sbjct: 62  LEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATV 98

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
356566864	160	PREDICTED: uncharacterized membrane prot	0.898	0.662	0.773	9e-44
356540166	161	PREDICTED: uncharacterized membrane prot	0.906	0.664	0.766	1e-43
224110756	174	predicted protein [Populus trichocarpa]	0.805	0.545	0.873	1e-43
449435039	176	PREDICTED: uncharacterized membrane prot	1.0	0.670	0.696	2e-42
388494302	169	unknown [Lotus japonicus]	0.932	0.650	0.736	5e-42
15220480	163	Acid phosphatase/vanadium-dependent halo	0.906	0.656	0.775	2e-41
12324675	143	unknown protein [Arabidopsis thaliana]	0.906	0.748	0.775	2e-41
297841459	163	hypothetical protein ARALYDRAFT_315776 [	0.889	0.644	0.780	3e-41
357463065	162	Acid phosphatase/vanadium-dependent halo	0.813	0.592	0.822	3e-41
255547868	178	conserved hypothetical protein [Ricinus	0.796	0.528	0.840	5e-41

>gi|356566864|ref|XP_003551646.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max]

 Score =  180 bits (457), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 82/106 (77%), Positives = 96/106 (90%)

Query: 13  SSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSAT 72
           S +++++SSS++ N+PLISA VAF IAQ  KFFT WYKE+RWD KQL+GSGGMPSSHSAT
Sbjct: 2   SEAAATTSSSMMRNYPLISAIVAFAIAQFIKFFTVWYKEKRWDPKQLVGSGGMPSSHSAT 61

Query: 73  VTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           VTALA A+GF EGFGGPLFATAL+LAC+VMYDATGVRLQAGRQAE+
Sbjct: 62  VTALAAAIGFHEGFGGPLFATALVLACIVMYDATGVRLQAGRQAEL 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540166|ref|XP_003538561.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max]

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 98/107 (91%)

Query: 12  SSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSA 71
           S ++++++SSS++ N+PLISA VAF IAQ  KFFTAW+KE+RWD KQL+GSGGMPSSHSA
Sbjct: 2   SEAAATTTSSSMMRNYPLISAIVAFAIAQFIKFFTAWFKEKRWDPKQLVGSGGMPSSHSA 61

Query: 72  TVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           TVTALA A+GF EGFGGPLFATAL+LAC+VMYDATGVRLQAGRQAE+
Sbjct: 62  TVTALAAAIGFHEGFGGPLFATALVLACIVMYDATGVRLQAGRQAEL 108

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110756|ref|XP_002315626.1| predicted protein [Populus trichocarpa] gi|222864666|gb|EEF01797.1| predicted protein [Populus trichocarpa]

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/95 (87%), Positives = 89/95 (93%)

Query: 24  ITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQ 83
           +TN+PLISAF+AF IAQ  KFFT+WYKERRWDLKQL+GSGGMPSSHSATV ALAMAVGFQ
Sbjct: 24  LTNYPLISAFLAFAIAQSIKFFTSWYKERRWDLKQLVGSGGMPSSHSATVAALAMAVGFQ 83

Query: 84  EGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           EGFGG LF+ ALILACVVMYDATGVRLQAGRQAEV
Sbjct: 84  EGFGGSLFSIALILACVVMYDATGVRLQAGRQAEV 118

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435039|ref|XP_004135303.1| PREDICTED: uncharacterized membrane protein YuiD-like [Cucumis sativus] gi|449494875|ref|XP_004159671.1| PREDICTED: uncharacterized membrane protein YuiD-like [Cucumis sativus]

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%), Gaps = 4/122 (3%)

Query: 1   MDDFSDS----VSTTSSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDL 56
           MDD + S    ++   S + SS SS+I TN+PLISA +AF IAQ  KFFT+WYKERRWD 
Sbjct: 1   MDDVTASSGSLINGPPSHTPSSFSSTIFTNYPLISALLAFAIAQSIKFFTSWYKERRWDF 60

Query: 57  KQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQA 116
           K+L+GSGGMPSSHS+TV+ALA+A+G QEGFG  +FA ALILACVVMYDATGVRLQAGRQA
Sbjct: 61  KKLVGSGGMPSSHSSTVSALAIAIGLQEGFGASVFAVALILACVVMYDATGVRLQAGRQA 120

Query: 117 EV 118
           EV
Sbjct: 121 EV 122

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494302|gb|AFK35217.1| unknown [Lotus japonicus]

 Score =  174 bits (442), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 81/110 (73%), Positives = 93/110 (84%)

Query: 9   STTSSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSS 68
           +  ++  SS+S S I  N+PLISA VAF +AQ  KFFT W+KERRWD+KQL+ SGGMPSS
Sbjct: 7   TEVAAMHSSTSFSLISVNYPLISALVAFALAQGIKFFTTWFKERRWDMKQLVASGGMPSS 66

Query: 69  HSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           HSA VTALA A+GFQEGFGGPLFA AL+LAC+VMYDATGVRLQAGRQAEV
Sbjct: 67  HSAVVTALAAAIGFQEGFGGPLFAIALVLACIVMYDATGVRLQAGRQAEV 116

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220480|ref|NP_176927.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|11072018|gb|AAG28897.1|AC008113_13 F12A21.27 [Arabidopsis thaliana] gi|21555489|gb|AAM63870.1| unknown [Arabidopsis thaliana] gi|89274151|gb|ABD65596.1| At1g67600 [Arabidopsis thaliana] gi|332196549|gb|AEE34670.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 92/107 (85%)

Query: 12  SSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSA 71
           S +SSSS   SI TN+PLISA +AFTIAQ  KFFT+WYKERRWDLK+L+GSGGMPSSHSA
Sbjct: 4   SVASSSSHYISIFTNYPLISAVLAFTIAQFIKFFTSWYKERRWDLKRLVGSGGMPSSHSA 63

Query: 72  TVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           TVTALA+AVG QEGFGG  FA AL+L  +VMYDATGVRL AGRQAEV
Sbjct: 64  TVTALALAVGLQEGFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEV 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12324675|gb|AAG52298.1|AC011020_5 unknown protein [Arabidopsis thaliana]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 92/107 (85%)

Query: 12  SSSSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSA 71
           S +SSSS   SI TN+PLISA +AFTIAQ  KFFT+WYKERRWDLK+L+GSGGMPSSHSA
Sbjct: 4   SVASSSSHYISIFTNYPLISAVLAFTIAQFIKFFTSWYKERRWDLKRLVGSGGMPSSHSA 63

Query: 72  TVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           TVTALA+AVG QEGFGG  FA AL+L  +VMYDATGVRL AGRQAEV
Sbjct: 64  TVTALALAVGLQEGFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEV 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841459|ref|XP_002888611.1| hypothetical protein ARALYDRAFT_315776 [Arabidopsis lyrata subsp. lyrata] gi|297334452|gb|EFH64870.1| hypothetical protein ARALYDRAFT_315776 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/105 (78%), Positives = 91/105 (86%)

Query: 14  SSSSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATV 73
           +SSSS   SI TNFPLIS+ +AFTIAQ  KFFT+WYKERRWDLK+L+GSGGMPSSHSATV
Sbjct: 6   ASSSSHYISIFTNFPLISSLLAFTIAQFIKFFTSWYKERRWDLKRLVGSGGMPSSHSATV 65

Query: 74  TALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           TALA+AVG QEGFGG  FA AL+L  +VMYDATGVRL AGRQAEV
Sbjct: 66  TALALAVGLQEGFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEV 110

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463065|ref|XP_003601814.1| Acid phosphatase/vanadium-dependent haloperoxidase-like protein [Medicago truncatula] gi|355490862|gb|AES72065.1| Acid phosphatase/vanadium-dependent haloperoxidase-like protein [Medicago truncatula] gi|388508322|gb|AFK42227.1| unknown [Medicago truncatula]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 86/96 (89%)

Query: 23  IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
           I  N+PLISA +AFTIAQ  KFFT WYKE+RWD KQL+GSGGMPSSHSATVTALA AVGF
Sbjct: 14  IFHNYPLISAILAFTIAQSIKFFTVWYKEKRWDPKQLVGSGGMPSSHSATVTALATAVGF 73

Query: 83  QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
            EGFGGPLFATAL++A +VMYDATGVRLQAGRQAEV
Sbjct: 74  HEGFGGPLFATALVMAIIVMYDATGVRLQAGRQAEV 109

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547868|ref|XP_002514991.1| conserved hypothetical protein [Ricinus communis] gi|223546042|gb|EEF47545.1| conserved hypothetical protein [Ricinus communis]

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 85/94 (90%)

Query: 25  TNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQE 84
           TN+PL+SA VAF IAQ  K FT+WYKERRWD KQL+GSGGMPSSHSATVTALA+A+G QE
Sbjct: 29  TNYPLLSALVAFAIAQSTKVFTSWYKERRWDFKQLVGSGGMPSSHSATVTALAIAIGLQE 88

Query: 85  GFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           GFGG LFA ALILACVVMYDATGVRLQAGRQAEV
Sbjct: 89  GFGGSLFAAALILACVVMYDATGVRLQAGRQAEV 122

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
TAIR|locus:2008575	163	AT1G67600 "AT1G67600" [Arabido	0.813	0.588	0.802	3e-37
TAIR|locus:2089950	174	AT3G21610 "AT3G21610" [Arabido	0.788	0.534	0.709	8.5e-33
UNIPROTKB|Q81YD7	141	BAS3352 "Uncharacterized prote	0.813	0.680	0.468	2e-17
TIGR_CMR|BA_3613	141	BA_3613 "conserved hypothetica	0.813	0.680	0.468	2e-17
UNIPROTKB|Q71X40	157	LMOf2365_2359 "Putative unchar	0.813	0.611	0.458	1.1e-16
TAIR|locus:2076790	284	AT3G61770 "AT3G61770" [Arabido	0.788	0.327	0.473	6e-16
TAIR|locus:505006336	213	AT3G12685 "AT3G12685" [Arabido	0.813	0.450	0.371	9.1e-13

TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 77/96 (80%), Positives = 85/96 (88%)

Query:    23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
             I TN+PLISA +AFTIAQ  KFFT+WYKERRWDLK+L+GSGGMPSSHSATVTALA+AVG 
Sbjct:    15 IFTNYPLISAVLAFTIAQFIKFFTSWYKERRWDLKRLVGSGGMPSSHSATVTALALAVGL 74

Query:    83 QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
             QEGFGG  FA AL+L  +VMYDATGVRL AGRQAEV
Sbjct:    75 QEGFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEV 110

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 66/93 (70%), Positives = 79/93 (84%)

Query:    26 NFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEG 85
             N P+ SAF+AF +AQ  K FT WYKE+RWD K++I SGGMPSSHSATVTALA+A+GF+EG
Sbjct:    33 NLPIFSAFLAFALAQFLKVFTNWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEG 92

Query:    86 FGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
              G P FA A++LACVVMYDA+GVRL AGRQAE+
Sbjct:    93 AGAPAFAIAVVLACVVMYDASGVRLHAGRQAEL 125

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 45/96 (46%), Positives = 61/96 (63%)

Query:    23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
             I+ N PL++A +++ +AQ  K      K   +D  +   SGGMPSSH++TVTALA  VG 
Sbjct:     4 ILHNDPLMAAVISWFLAQFTKVIFKLVKTGEFDFAKFFASGGMPSSHASTVTALATGVGV 63

Query:    83 QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
              EG    LFA A I A +VMYDA+GVRL   +QA++
Sbjct:    64 VEGVESTLFAIAAIFAIIVMYDASGVRLAVSKQAKI 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 45/96 (46%), Positives = 61/96 (63%)

Query:    23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
             I+ N PL++A +++ +AQ  K      K   +D  +   SGGMPSSH++TVTALA  VG 
Sbjct:     4 ILHNDPLMAAVISWFLAQFTKVIFKLVKTGEFDFAKFFASGGMPSSHASTVTALATGVGV 63

Query:    83 QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
              EG    LFA A I A +VMYDA+GVRL   +QA++
Sbjct:    64 VEGVESTLFAIAAIFAIIVMYDASGVRLAVSKQAKI 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 44/96 (45%), Positives = 58/96 (60%)

Query:    23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
             I TN PLI++ +A   AQ  K        R+++L  +  +GGMPSSHSA VTAL   +  
Sbjct:     3 IFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTLAI 62

Query:    83 QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
             + G   P FA A++   +VM+DATGVR QAG QA V
Sbjct:    63 EYGLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVV 98

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/93 (47%), Positives = 54/93 (58%)

Query:    26 NFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEG 85
             N   +SA VA+  AQ +K    ++ ER+WD + L  SGGMPSSHSA   AL  +V    G
Sbjct:   140 NPTFVSAVVAWFFAQSSKMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHG 199

Query:    86 FGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
                 LF   L  + +VMYDA GVR  AG QAEV
Sbjct:   200 VADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEV 232

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query:    23 IITNFPLISAFVAFTIAQCAKFFTAWYKE-RRWDLKQLIGSGGMPSSHSATVTALAMAVG 81
             +I N  LI+A  +  I Q +K FT+     +  D + +  +GG PS+HS++V A A A+ 
Sbjct:    50 VIHNKVLIAAGTSAVIGQLSKPFTSVVLYGKNLDFRSVFQAGGFPSTHSSSVVAAATAIA 109

Query:    82 FQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
             F+ GF   +F   ++ A ++MYDA GVR + G+ A+V
Sbjct:   110 FERGFADSIFGLTVVYAGLIMYDAQGVRREVGKHAKV 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.138   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      118       100   0.00091  102 3  11 22  0.44    29
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  116 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.58u 0.13s 10.71t   Elapsed:  00:00:00
  Total cpu time:  10.58u 0.13s 10.71t   Elapsed:  00:00:00
  Start:  Mon May 20 23:04:29 2013   End:  Mon May 20 23:04:29 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_X000177 hypothetical protein (174 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	118
pfam02681	141	pfam02681, DUF212, Divergent PAP2 family	6e-50
COG1963	153	COG1963, COG1963, Uncharacterized protein conserve	7e-34

>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family

 Score =  155 bits (393), Expect = 6e-50
 Identities = 53/96 (55%), Positives = 67/96 (69%)

Query: 23  IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGF 82
           +++N  L++A +A+ +AQ  K     +KERRWD + L  +GGMPSSHSA VTALA  VG 
Sbjct: 1   LLSNKVLLAALLAWFLAQFIKVIIELFKERRWDFRVLFETGGMPSSHSALVTALATGVGL 60

Query: 83  QEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
           QEGF   LFA A + A +VMYDA GVR  AG+QAEV
Sbjct: 61  QEGFDSSLFAIAAVFALIVMYDAAGVRRAAGKQAEV 96

This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141

>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown]

 Score =  114 bits (287), Expect = 7e-34
 Identities = 49/97 (50%), Positives = 61/97 (62%)

Query: 22  SIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVG 81
            I TN PL+SA VA  +AQ  K      + R+ ++  L  +GGMPSSHSA VTALA ++ 
Sbjct: 6   EIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIA 65

Query: 82  FQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
             EG   PLFA A + A +VMYDATGVR  AG QA +
Sbjct: 66  LTEGLDSPLFAIAAVFAIIVMYDATGVRRSAGVQARI 102

Length = 153

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
PF02681	141	DUF212: Divergent PAP2 family; InterPro: IPR003832	100.0
COG1963	153	Uncharacterized protein conserved in bacteria [Fun	100.0
cd03383	109	PAP2_diacylglycerolkinase PAP2_like proteins, diac	97.4
cd03394	106	PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-	97.29
cd03391	159	PAP2_containing_2_like PAP2, subfamily similar to	96.51
cd03388	151	PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho	96.47
PF01569	129	PAP2: PAP2 superfamily This family includes the fo	96.44
cd03382	159	PAP2_dolichyldiphosphatase PAP2_like proteins, dol	96.39
PRK09597	190	lipid A 1-phosphatase; Reviewed	96.18
cd01610	122	PAP2_like PAP2_like proteins, a super-family of hi	96.05
cd03393	125	PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-	96.04
cd03392	182	PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-	95.84
cd03385	144	PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa	95.28
PLN02525	352	phosphatidic acid phosphatase family protein	95.18
cd03389	186	PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip	95.12
cd03395	177	PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-	94.54
KOG3146	228	consensus Dolichyl pyrophosphate phosphatase and r	93.4
smart00014	116	acidPPc Acid phosphatase homologues.	92.67
PRK11837	202	undecaprenyl pyrophosphate phosphatase; Provisiona	92.45
cd03384	150	PAP2_wunen PAP2, wunen subfamily. Most likely a fa	92.35
cd03381	235	PAP2_glucose_6_phosphatase PAP2_like proteins, glu	90.81
PRK10699	244	phosphatidylglycerophosphatase B; Provisional	90.7
cd03390	193	PAP2_containing_1_like PAP2, subfamily similar to	90.59
COG0671	232	PgpB Membrane-associated phospholipid phosphatase	90.11
cd03396	197	PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-	90.02
PLN02731	333	Putative lipid phosphate phosphatase	85.71
cd03380	209	PAP2_like_1 PAP2_like_1 proteins, a sub-family of	85.44
cd03386	186	PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa	81.39

>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised

Probab=100.00  E-value=9.2e-52  Score=310.28  Aligned_cols=96  Identities=57%  Similarity=0.923  Sum_probs=94.4

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033493           23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM  102 (118)
Q Consensus        23 l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM  102 (118)
                      |++|++|+++++||++||++|++++++++|+|||++++++|||||||||+|+||+|++|+++||+||+||+|++||+|||
T Consensus         1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm   80 (141)
T PF02681_consen    1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM   80 (141)
T ss_pred             CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccchhhhhhhhcccC
Q 033493          103 YDATGVRLQAGRQAEV  118 (118)
Q Consensus       103 yDA~GVRr~aG~qA~v  118 (118)
                      |||+||||++||||++
T Consensus        81 yDA~GVRr~aG~qA~~   96 (141)
T PF02681_consen   81 YDAMGVRRAAGKQAKV   96 (141)
T ss_pred             eehHHHHHHHHHHHHH
Confidence            9999999999999974

>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=1.3e-47  Score=290.76  Aligned_cols=101  Identities=49%  Similarity=0.723  Sum_probs=98.5

Q ss_pred             cchhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 033493           18 SSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALIL   97 (118)
Q Consensus        18 ~~~~~l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~   97 (118)
                      .++.++++|.+|++|++||+.||++|++|+++++||+||+.+++||||||||||+|+||+|++|+++|||||+||||++|
T Consensus         2 ~~~~~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vf   81 (153)
T COG1963           2 QDLMEIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVF   81 (153)
T ss_pred             chHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccchhhhhhhhcccC
Q 033493           98 ACVVMYDATGVRLQAGRQAEV  118 (118)
Q Consensus        98 a~IVMyDA~GVRr~aG~qA~v  118 (118)
                      |+||||||.||||++|+||++
T Consensus        82 aiIvm~DA~GVRr~aG~QA~i  102 (153)
T COG1963          82 AIIVMYDATGVRRSAGVQARI  102 (153)
T ss_pred             HHHHhhhhhhHHHhccchHHH
Confidence            999999999999999999964

>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family

Probab=97.40  E-value=0.0013  Score=47.19  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=44.8

Q ss_pred             hhchH---HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 033493           24 ITNFP---LISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACV  100 (118)
Q Consensus        24 ~~N~~---L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~I  100 (118)
                      -+|++   +.+-+++.++.+++|.++   +..  .+.    .+||||.|++...++++.+.+... ....-.+..+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~i~~~lK~~~---~r~--RP~----~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~l   75 (109)
T cd03383           6 GESPPHVTFVSLLIVIIVVVILKAYF---GRG--TPL----EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVM   75 (109)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHh---CCC--CCC----CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence            34554   455566888888888865   222  221    368999999999999998876421 11233455566666


Q ss_pred             HHh
Q 033493          101 VMY  103 (118)
Q Consensus       101 VMy  103 (118)
                      |.+
T Consensus        76 v~~   78 (109)
T cd03383          76 VAH   78 (109)
T ss_pred             HHH
Confidence            654

In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.

>cd03394 PAP2_like_5 PAP2_like_5 proteins

Probab=97.29  E-value=0.003  Score=43.65  Aligned_cols=54  Identities=22%  Similarity=0.254  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcC
Q 033493           29 LISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGF   86 (118)
Q Consensus        29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~   86 (118)
                      +.+.+++.++.+.+|..++-  .|-.+  ..-...+|||.|++...++++.+....+.
T Consensus         9 ~~~~~~~~~~~~~lK~~~~r--~RP~~--~~~~~~sfPSgHa~~a~~~~~~~~~~~~~   62 (106)
T cd03394           9 AEAAALTAAVTEGLKFAVGR--ARPDG--SNNGYRSFPSGHTASAFAAATFLQYRYGW   62 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHCC--CCCCC--CCCCCCccCcHHHHHHHHHHHHHHHHHcc
Confidence            44555666777777776531  22111  11557799999999999999999887765

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2

Probab=96.51  E-value=0.0084  Score=44.82  Aligned_cols=41  Identities=22%  Similarity=0.147  Sum_probs=28.8

Q ss_pred             CCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033493           63 GGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY  103 (118)
Q Consensus        63 GGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy  103 (118)
                      -+|||.|++...++++.+.+..+.......+.+.++++|.+
T Consensus        91 ~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~  131 (159)
T cd03391          91 YSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGI  131 (159)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            38999999999999988887655333344455555666554

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.

>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily

Probab=96.47  E-value=0.016  Score=42.48  Aligned_cols=73  Identities=19%  Similarity=0.165  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccch---hhh----hccCCCCchhHHHHHHHHHHHHHHh--cCCch---HHHHHHH
Q 033493           29 LISAFVAFTIAQCAKFFTAWYKERRWDL---KQL----IGSGGMPSSHSATVTALAMAVGFQE--GFGGP---LFATALI   96 (118)
Q Consensus        29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~---~~l----~~sGGMPSSHSA~V~aLat~iG~~~--G~~S~---~Faia~v   96 (118)
                      +....++..+.+++|..++.-  |-...   ...    -..=||||.|++...++++.+.+..  .+..+   ...++++
T Consensus        39 ~~~~~~~~~~~~~lK~~~~r~--RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~  116 (151)
T cd03388          39 VVVLALGMYIGQFIKDLFCLP--RPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALF  116 (151)
T ss_pred             HHHHHHHHHHHHHHHHHHcCC--CcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence            344556667788888877532  21111   111    1234899999999999998887642  22211   2234455


Q ss_pred             HHHHHHh
Q 033493           97 LACVVMY  103 (118)
Q Consensus        97 ~a~IVMy  103 (118)
                      +++.|.+
T Consensus       117 ~~~~v~~  123 (151)
T cd03388         117 YSTLVCL  123 (151)
T ss_pred             HHHHHHH
Confidence            5565554

Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.

>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3

Probab=96.44  E-value=0.033  Score=37.86  Aligned_cols=29  Identities=28%  Similarity=0.410  Sum_probs=23.0

Q ss_pred             cCCCCchhHHHHHHHHHHHHHHhcCCchH
Q 033493           62 SGGMPSSHSATVTALAMAVGFQEGFGGPL   90 (118)
Q Consensus        62 sGGMPSSHSA~V~aLat~iG~~~G~~S~~   90 (118)
                      .++|||.|++...++++.+-...+.....
T Consensus        48 ~~sfPSgH~~~~~~~~~~l~~~~~~~~~~   76 (129)
T PF01569_consen   48 FNSFPSGHAAIAAAFAFFLAYYLGSRGWI   76 (129)
T ss_dssp             S-SSS-HHHHHHHHHHHHHHHHCCCCHHH
T ss_pred             CCcCcchhhhhHHHHHhhhhhhhhccccc
Confidence            35999999999999999998888776664

1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....

>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily

Probab=96.39  E-value=0.043  Score=40.86  Aligned_cols=22  Identities=36%  Similarity=0.409  Sum_probs=17.1

Q ss_pred             ccCCCCchhHHHHHHHHHHHHH
Q 033493           61 GSGGMPSSHSATVTALAMAVGF   82 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~   82 (118)
                      ..-||||.|++...++++.+.+
T Consensus        79 ~~~SFPSgHa~~~~~~~~~~~l  100 (159)
T cd03382          79 SGYGMPSSHSQFMGFFAVYLLL  100 (159)
T ss_pred             CCCCCCchhHHHHHHHHHHHHH
Confidence            4669999999988777766654

Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.

>PRK09597 lipid A 1-phosphatase; Reviewed

Probab=96.18  E-value=0.046  Score=43.33  Aligned_cols=70  Identities=19%  Similarity=0.150  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033493           31 SAFVAFTIAQCAKFFTAWYK--ERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM  102 (118)
Q Consensus        31 ~al~a~~~AQ~lK~~i~~~~--~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM  102 (118)
                      +.+.+.++.+.+|..++-..  +-+.+.+.--.+-+|||.|++...+.++.+...+++.....  .+.++++|.
T Consensus        85 al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~~~~--~l~lallVg  156 (190)
T PRK09597         85 ASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYWW--LLPLIPLTM  156 (190)
T ss_pred             HHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhHHHH--HHHHHHHHH
Confidence            44444555566666554210  01222221112358999999999888877776666654333  334445554

>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies

Probab=96.05  E-value=0.048  Score=36.00  Aligned_cols=55  Identities=20%  Similarity=0.277  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchhhh----------hccCCCCchhHHHHHHHHHHHHHHhcC
Q 033493           30 ISAFVAFTIAQCAKFFTAWYKERRWDLKQL----------IGSGGMPSSHSATVTALAMAVGFQEGF   86 (118)
Q Consensus        30 ~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l----------~~sGGMPSSHSA~V~aLat~iG~~~G~   86 (118)
                      .......++.+.+|.+..  +.|-+.....          -...+|||.|++...++++.+....+-
T Consensus        10 ~~~~~~~~~~~~~k~~~~--~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~   74 (122)
T cd01610          10 LALLAGLLLTGVLKYLFG--RPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPR   74 (122)
T ss_pred             HHHHHHHHHHHHHHHHhC--CCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            333444456778887732  2222222211          225899999999999999999887664

Several members of this superfamily have been predicted to be transmembrane proteins.

>cd03393 PAP2_like_3 PAP2_like_3 proteins

Probab=96.04  E-value=0.032  Score=39.47  Aligned_cols=55  Identities=15%  Similarity=0.156  Sum_probs=34.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcccchh-------hhhccCCCCchhHHHHHHHHHHHHHH
Q 033493           27 FPLISAFVAFTIAQCAKFFTAWYKERRWDLK-------QLIGSGGMPSSHSATVTALAMAVGFQ   83 (118)
Q Consensus        27 ~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~-------~l~~sGGMPSSHSA~V~aLat~iG~~   83 (118)
                      ..+.+.+++.++.+++|..++  +.|-....       .--...++||.|++...++.+.+...
T Consensus        17 ~~~~~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~   78 (125)
T cd03393          17 YLGLALCASGYLNAALKEVFK--IPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLH   78 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC--CCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            356677778888888888763  22211111       11235789999999887776666544

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03392 PAP2_like_2 PAP2_like_2 proteins

Probab=95.84  E-value=0.077  Score=39.32  Aligned_cols=50  Identities=16%  Similarity=0.098  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchhh-hhccCCCCchhHHHHHHHHHHHHH
Q 033493           31 SAFVAFTIAQCAKFFTAWYKERRWDLKQ-LIGSGGMPSSHSATVTALAMAVGF   82 (118)
Q Consensus        31 ~al~a~~~AQ~lK~~i~~~~~r~~d~~~-l~~sGGMPSSHSA~V~aLat~iG~   82 (118)
                      +.+.+.++.|++|.+++  +.|-..... --...+|||.|++...+++..+.+
T Consensus        70 ~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~  120 (182)
T cd03392          70 ALLGGGALNTLLKLLVQ--RPRPPLHLLVPEGGYSFPSGHAMGATVLYGFLAY  120 (182)
T ss_pred             HHHHHHHHHHHHHHHhc--CCCCCCcccCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence            34456666777777763  222111111 124567999999999888776654

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily

Probab=95.28  E-value=0.23  Score=35.86  Aligned_cols=39  Identities=23%  Similarity=0.230  Sum_probs=24.3

Q ss_pred             cCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033493           62 SGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM  102 (118)
Q Consensus        62 sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM  102 (118)
                      .-+|||.|++...++++.+.+.+-  -....+.++++++|.
T Consensus        76 ~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~  114 (144)
T cd03385          76 DSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVA  114 (144)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHH
Confidence            468999999998888876654331  112334455555554

Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.

>PLN02525 phosphatidic acid phosphatase family protein

Probab=95.18  E-value=0.062  Score=45.71  Aligned_cols=72  Identities=15%  Similarity=0.089  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchhhhh--------cc-CCCCchhHHHHHHHHHHHHHH-h---cCCch-----HHHH
Q 033493           32 AFVAFTIAQCAKFFTAWYKERRWDLKQLI--------GS-GGMPSSHSATVTALAMAVGFQ-E---GFGGP-----LFAT   93 (118)
Q Consensus        32 al~a~~~AQ~lK~~i~~~~~r~~d~~~l~--------~s-GGMPSSHSA~V~aLat~iG~~-~---G~~S~-----~Fai   93 (118)
                      -.++..+.|++|-++..-|=..-...++.        .. =||||+||+..++++..+.+. .   ...++     ..++
T Consensus        44 l~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l  123 (352)
T PLN02525         44 MAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLAL  123 (352)
T ss_pred             HHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Confidence            34455778888877743221100111121        11 289999999999998766543 1   11122     1345


Q ss_pred             HHHHHHHHHh
Q 033493           94 ALILACVVMY  103 (118)
Q Consensus        94 a~v~a~IVMy  103 (118)
                      +.++++.|+|
T Consensus       124 ~~l~allV~~  133 (352)
T PLN02525        124 FCLLVALVGF  133 (352)
T ss_pred             HHHHHHHHHH
Confidence            6666777665

>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily

Probab=95.12  E-value=0.2  Score=38.12  Aligned_cols=22  Identities=41%  Similarity=0.415  Sum_probs=18.6

Q ss_pred             CCCCchhHHHHHHHHHHHHHHh
Q 033493           63 GGMPSSHSATVTALAMAVGFQE   84 (118)
Q Consensus        63 GGMPSSHSA~V~aLat~iG~~~   84 (118)
                      -++||.|++...++++.+.+..
T Consensus       118 ~SFPSGHa~~a~~~~~~l~~~~  139 (186)
T cd03389         118 TSFPSGHSATAGAAAAALALLF  139 (186)
T ss_pred             CCcCcHHHHHHHHHHHHHHHHH
Confidence            3799999999999998887654

Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.

>cd03395 PAP2_like_4 PAP2_like_4 proteins

Probab=94.54  E-value=0.2  Score=37.24  Aligned_cols=40  Identities=30%  Similarity=0.237  Sum_probs=27.1

Q ss_pred             CCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033493           63 GGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY  103 (118)
Q Consensus        63 GGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy  103 (118)
                      =++||.|++...++++.+.+..--. +...+.+++++.|.+
T Consensus       104 ~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~  143 (177)
T cd03395         104 YSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALLVGY  143 (177)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            3799999999999999887642111 234455666666654

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]

Probab=93.40  E-value=0.46  Score=38.95  Aligned_cols=68  Identities=26%  Similarity=0.322  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHHHHhcccchhh--------hhccCCCCchhHHHHHHHHH--HHHHHhcCCchHHHHHH--------HH
Q 033493           36 FTIAQCAKFFTAWYKERRWDLKQ--------LIGSGGMPSSHSATVTALAM--AVGFQEGFGGPLFATAL--------IL   97 (118)
Q Consensus        36 ~~~AQ~lK~~i~~~~~r~~d~~~--------l~~sGGMPSSHSA~V~aLat--~iG~~~G~~S~~Faia~--------v~   97 (118)
                      .++.|++.=++|++.++.++-.|        +-..=|||||||=.+.=..+  ..-..+++++.-|..-.        .+
T Consensus        60 ~~~G~v~Ne~in~viK~il~qpRP~~~~~~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laL  139 (228)
T KOG3146|consen   60 FVIGQVSNEFINVVIKNILKQPRPVSFPDTTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLAL  139 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence            34566666666655433333222        33455999999987653333  33444555555444333        44


Q ss_pred             HHHHHh
Q 033493           98 ACVVMY  103 (118)
Q Consensus        98 a~IVMy  103 (118)
                      +..|||
T Consensus       140 s~~v~~  145 (228)
T KOG3146|consen  140 SFYVCY  145 (228)
T ss_pred             HHHHHH
Confidence            556665

>smart00014 acidPPc Acid phosphatase homologues

Probab=92.67  E-value=0.53  Score=32.21  Aligned_cols=52  Identities=17%  Similarity=0.115  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccc---------chhhh-hccCCCCchhHHHHHHHHHHHHHH
Q 033493           32 AFVAFTIAQCAKFFTAWYKERRW---------DLKQL-IGSGGMPSSHSATVTALAMAVGFQ   83 (118)
Q Consensus        32 al~a~~~AQ~lK~~i~~~~~r~~---------d~~~l-~~sGGMPSSHSA~V~aLat~iG~~   83 (118)
                      .+.+-++.+++|..+..-+=..+         +.... -...++||.|++...+.++.+...
T Consensus         4 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~   65 (116)
T smart00014        4 AVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLY   65 (116)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHH
Confidence            45666777777777642221001         11111 235789999999999998888753

>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional

Probab=92.45  E-value=0.83  Score=35.61  Aligned_cols=70  Identities=14%  Similarity=0.186  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccch----hhh--hccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033493           30 ISAFVAFTIAQCAKFFTAWYKERRWDL----KQL--IGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY  103 (118)
Q Consensus        30 ~~al~a~~~AQ~lK~~i~~~~~r~~d~----~~l--~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy  103 (118)
                      .+.+++.++.+++|.+++  +.|-...    ..+  -..-.+||.|++...+.++.+-+...  -....+.++++++|++
T Consensus        66 ~~~~~~~~~~~~lk~~~~--r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~  141 (202)
T PRK11837         66 IALAISLLVSWTIGHLFP--HDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAW  141 (202)
T ss_pred             HHHHHHHHHHHHHHHHhc--CCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence            344566667777777663  1121110    011  23457999999987776654322211  1133445555666554

>cd03384 PAP2_wunen PAP2, wunen subfamily

Probab=92.35  E-value=0.86  Score=33.61  Aligned_cols=20  Identities=20%  Similarity=0.263  Sum_probs=16.3

Q ss_pred             CCCCchhHHHHHHHHHHHHH
Q 033493           63 GGMPSSHSATVTALAMAVGF   82 (118)
Q Consensus        63 GGMPSSHSA~V~aLat~iG~   82 (118)
                      =+|||.||+...+.++.+.+
T Consensus        72 ~SFPSGHs~~a~~~~~~l~l   91 (150)
T cd03384          72 LSFPSGHASLSMYAAVFLAL   91 (150)
T ss_pred             cCCCcHhHHHHHHHHHHHHH
Confidence            47999999999877776654

Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.

>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily

Probab=90.81  E-value=1.1  Score=36.21  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccch-hhh------------------hccCCCCchhHHHHHHHHHHHH
Q 033493           29 LISAFVAFTIAQCAKFFTAWYKERRWDL-KQL------------------IGSGGMPSSHSATVTALAMAVG   81 (118)
Q Consensus        29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~-~~l------------------~~sGGMPSSHSA~V~aLat~iG   81 (118)
                      +++.+++-.+-+++|.++.  ++|-.-| ++.                  -...||||.|+...+++...+.
T Consensus        21 ~~~~~~~~~ln~vlK~ii~--r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~   90 (235)
T cd03381          21 LWVAVIGDWLNLVFKWILF--GQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMV   90 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhC--CCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHH
Confidence            4445555447888888773  3333211 110                  1256899999977766655443

Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.

>PRK10699 phosphatidylglycerophosphatase B; Provisional

Probab=90.70  E-value=2.1  Score=34.95  Aligned_cols=41  Identities=27%  Similarity=0.216  Sum_probs=23.3

Q ss_pred             CCCCchhHHHHHHHHH-HHHHH-hcCCchHHHHHHHHHHHHHh
Q 033493           63 GGMPSSHSATVTALAM-AVGFQ-EGFGGPLFATALILACVVMY  103 (118)
Q Consensus        63 GGMPSSHSA~V~aLat-~iG~~-~G~~S~~Faia~v~a~IVMy  103 (118)
                      -||||.|++...+++. .+++. ..-....+.+.++.+..|+|
T Consensus       157 ySFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~  199 (244)
T PRK10699        157 FAFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMG  199 (244)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4899999998766543 22221 11112334555666667665

>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1

Probab=90.59  E-value=0.73  Score=34.88  Aligned_cols=20  Identities=25%  Similarity=0.190  Sum_probs=16.9

Q ss_pred             CCCCchhHHHHHHHHHHHHH
Q 033493           63 GGMPSSHSATVTALAMAVGF   82 (118)
Q Consensus        63 GGMPSSHSA~V~aLat~iG~   82 (118)
                      -+|||.|++...++++.+.+
T Consensus       110 ~SFPSGHas~a~~~~~~l~l  129 (193)
T cd03390         110 KSFPSGHSSFAFAGLGFLSL  129 (193)
T ss_pred             cCCCCccHHHHHHHHHHHHH
Confidence            37999999999888877765

Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.

>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]

Probab=90.11  E-value=0.62  Score=32.94  Aligned_cols=44  Identities=25%  Similarity=0.308  Sum_probs=29.3

Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHhcCCch------HHHHHHHHHHHHHhc
Q 033493           61 GSGGMPSSHSATVTALAMAVGFQEGFGGP------LFATALILACVVMYD  104 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~~~G~~S~------~Faia~v~a~IVMyD  104 (118)
                      ...+|||.|++...+.+....+....-..      ...+..+++..|++-
T Consensus       132 ~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S  181 (232)
T COG0671         132 SGYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS  181 (232)
T ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            35679999999998888877766554432      235555566666553

>cd03396 PAP2_like_6 PAP2_like_6 proteins

Probab=90.02  E-value=3.5  Score=31.36  Aligned_cols=18  Identities=28%  Similarity=0.320  Sum_probs=14.0

Q ss_pred             cCCCCchhHHHHHHHHHH
Q 033493           62 SGGMPSSHSATVTALAMA   79 (118)
Q Consensus        62 sGGMPSSHSA~V~aLat~   79 (118)
                      .-.+||.|++...++...
T Consensus       121 ~~SFPSGHas~af~~~~~  138 (197)
T cd03396         121 GCSFPSGHASAGFALLAL  138 (197)
T ss_pred             CCcCCchhHHHHHHHHHH
Confidence            347999999998887543

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>PLN02731 Putative lipid phosphate phosphatase

Probab=85.71  E-value=4.9  Score=34.27  Aligned_cols=20  Identities=15%  Similarity=0.107  Sum_probs=17.0

Q ss_pred             CCCchhHHHHHHHHHHHHHH
Q 033493           64 GMPSSHSATVTALAMAVGFQ   83 (118)
Q Consensus        64 GMPSSHSA~V~aLat~iG~~   83 (118)
                      ++||.||+...+..+.+.+.
T Consensus       180 SFPSGHSS~sfagl~fLsly  199 (333)
T PLN02731        180 SFPSGHTSWSFSGLGFLSLY  199 (333)
T ss_pred             CCCchhHHHHHHHHHHHHHH
Confidence            79999999998888777763

>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases

Probab=85.44  E-value=1.7  Score=33.22  Aligned_cols=25  Identities=20%  Similarity=0.088  Sum_probs=21.0

Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHhc
Q 033493           61 GSGGMPSSHSATVTALAMAVGFQEG   85 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~~~G   85 (118)
                      ..+++||.|++.-.++++.+....+
T Consensus       141 ~~~SfPSGHa~~a~a~a~~l~~~~~  165 (209)
T cd03380         141 KHPSYPSGHATFGGAAALVLAELFP  165 (209)
T ss_pred             CCCCcCCHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999998876544

>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily

Probab=81.39  E-value=2.5  Score=31.83  Aligned_cols=41  Identities=17%  Similarity=0.042  Sum_probs=26.8

Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033493           61 GSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY  103 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy  103 (118)
                      ....|||.|++....++..+.....-  ....+..++++.+.+
T Consensus       115 ~~~~fPS~H~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~i~~  155 (186)
T cd03386         115 PFNAFPSLHVAWAVLAALFLWRHRRR--LLRWLAVLWPLLIWL  155 (186)
T ss_pred             CcceeCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            57789999999998888877765431  134444444444443

Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	118
2ipb_A	230	PHON protein, class A nonspecific acid phosphatase	91.23
1d2t_A	231	Acid phosphatase; all alpha, hydrolase; 1.90A {Esc	80.86

>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A

Probab=91.23  E-value=0.9  Score=34.11  Aligned_cols=25  Identities=32%  Similarity=0.407  Sum_probs=20.4

Q ss_pred             hccCCCCchhHHHHHHHHHHHHHHh
Q 033493           60 IGSGGMPSSHSATVTALAMAVGFQE   84 (118)
Q Consensus        60 ~~sGGMPSSHSA~V~aLat~iG~~~   84 (118)
                      -...+|||.|++...++++.+.+..
T Consensus       129 ~~~~SFPSGHa~~a~a~a~~l~~~~  153 (230)
T 2ipb_A          129 RKDGSYPSGHDAYSTLLALVLSQAR  153 (230)
T ss_dssp             HTSCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCcChHHHHHHHHHHHHHHHHH
Confidence            3567899999999999888877654

>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A

Probab=80.86  E-value=2.9  Score=31.34  Aligned_cols=24  Identities=25%  Similarity=0.304  Sum_probs=20.1

Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHh
Q 033493           61 GSGGMPSSHSATVTALAMAVGFQE   84 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~~~   84 (118)
                      ...++||.|++...++++.+.+..
T Consensus       142 ~~~SFPSGHa~~a~a~a~~l~~~~  165 (231)
T 1d2t_A          142 KNGSYPSGHTSIGWATALVLAEIN  165 (231)
T ss_dssp             SSCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHH
Confidence            467899999999999988887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	118
d1d2ta_	224	Bacterial acid phosphatase {Escherichia blattae [T	81.37

>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]}

class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

Probab=81.37  E-value=0.93  Score=32.94  Aligned_cols=25  Identities=24%  Similarity=0.271  Sum_probs=20.3

Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHhc
Q 033493           61 GSGGMPSSHSATVTALAMAVGFQEG   85 (118)
Q Consensus        61 ~sGGMPSSHSA~V~aLat~iG~~~G   85 (118)
                      .++.+||.|++.-.++++.+.....
T Consensus       136 ~~~SfPSGHa~~a~~~a~~la~~~p  160 (224)
T d1d2ta_         136 KNGSYPSGHTSIGWATALVLAEINP  160 (224)
T ss_dssp             SSCCSSCHHHHHHHHHHHHHHHHCG
T ss_pred             CCCCcCchhHHHHHHHHHHHHHHhH
Confidence            4789999999988888888776553