Citrus Sinensis ID: 033495

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MASKLSVVAFSLVLIFLFLVENHatsiveaptpqpaessgrngnhstygttqgslqpqecgprcttrcsktqyrkpclffcqkccakclcvpagfygnkqscpcynnwktkrggpkcp
Flexible Loop (DISEMBL)
MASKLSVVAFSLVLIFLFLVENHATSIVEAPtpqpaessgrnGNHSTYGttqgslqpqecGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFygnkqscpcynnwktkrggpkcp
Low Complexity Region (SEG)
MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP
Disordered region (IsUnstruct)
****LSVVAFSLVLIFLFLVENHATSIV**********************************RCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWK*********
Disordered Region (DISOPRED)
*****SV*AFSLVLIFLFLVENHATSI********************************CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKR******
Disordered Region (DISEMBL)
MASKLSVVAFSLVLIFLFLVENHATSIVEAP**************STYG***************TTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWK*********
Disordered Region (DISPRO)
**SKLSVVAFSLVLIFLFLVENHATSIVEAP**********************SLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKT******C*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
P27057	112	Protein GAST1 OS=Solanum	N/A	no	0.601	0.633	0.816	4e-30
P47926	96	Protein RSI-1 OS=Solanum	N/A	no	0.728	0.895	0.514	2e-24
Q6NMQ7	101	Gibberellin-regulated pro	yes	no	0.559	0.653	0.757	3e-24
P46690	106	Gibberellin-regulated pro	no	no	0.830	0.924	0.504	6e-23
A8MR46	103	Gibberellin-regulated pro	no	no	0.864	0.990	0.537	3e-21
Q6GKX7	106	Gibberellin-regulated pro	no	no	0.889	0.990	0.473	2e-17
Q84J95	97	Gibberellin-regulated pro	no	no	0.559	0.680	0.681	1e-15
O80641	87	Gibberellin-regulated pro	no	no	0.550	0.747	0.476	5e-12
P86888	63	Peamaclein OS=Prunus pers	N/A	no	0.5	0.936	0.542	6e-12
Q8GWK5	119	Gibberellin-regulated pro	no	no	0.974	0.966	0.376	5e-11

>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/71 (81%), Positives = 64/71 (90%)

Query: 48  YGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNN 107
           YG ++G L PQ+C P+CT RCSKT Y+KPC+FFCQKCCAKCLCVPAG YGNKQSCPCYNN
Sbjct: 42  YGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNN 101

Query: 108 WKTKRGGPKCP 118
           WKTKRGGPKCP
Sbjct: 102 WKTKRGGPKCP 112

Solanum lycopersicum (taxid: 4081)

>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 21/107 (19%)

Query: 12  LVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKT 71
           L+LI +FL+    +++VE                         L+P +C PRCT RCS T
Sbjct: 11  LLLISMFLILLTFSNVVEG---------------------YNKLRPTDCKPRCTYRCSAT 49

Query: 72  QYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
            ++KPC+FFCQKCCA CLCVP G YGNKQSCPCYNNWKT+ G PKCP
Sbjct: 50  SHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96

Solanum lycopersicum (taxid: 4081)

>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 57/66 (86%)

Query: 53  GSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKR 112
           GSL+  +CG +CT RCS T+Y KPC+FFCQKCCAKCLCVP G YGNKQ CPCYNNWKT++
Sbjct: 36  GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

Query: 113 GGPKCP 118
           GGPKCP
Sbjct: 96  GGPKCP 101

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 64/109 (58%), Gaps = 11/109 (10%)

Query: 10  FSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCS 69
           F L LI LF+++    +           SSG N   S      GSL+  +C   C  RC 
Sbjct: 9   FLLTLIVLFMLQTMVMA-----------SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCK 57

Query: 70  KTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           KTQY K C+ FC KCC KCLCVP G+YGNKQ C CYNNWKT+ GGPKCP
Sbjct: 58  KTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

Gibberellin-regulated protein involved in the regulation of floral meristem and floral organ identity, and promotion of seed size and weight. May play a role in the promotion of gibberellin responses such as regulation of flowering under short-day conditions, seed germination and inhibition of gibberellin oxidase. Possesses redox activity in E.coli and may function in redox regulation in planta.

Arabidopsis thaliana (taxid: 3702)

>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 75/119 (63%), Gaps = 17/119 (14%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQ-E 59
           MA+KLS++ FS+V++ L L  +    I                N      T+ ++ P  E
Sbjct: 1   MATKLSIIVFSIVVLHLLLSAHMHFLI----------------NVCAECETKSAIPPLLE 44

Query: 60  CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           CGPRC  RCS TQY+KPCLFFC KCC KCLCVP G YGNKQ CPCYNNWKTK GGPKCP
Sbjct: 45  CGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 9/114 (7%)

Query: 5   LSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRC 64
           + ++   ++   LF  +      +E+    PA    +NG        +GSL+P+EC   C
Sbjct: 2   MKLIVVFVISSLLFATQFSNGDELESQAQAPA--IHKNGG-------EGSLKPEECPKAC 52

Query: 65  TTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
             RCS T +RKPCLFFC KCC KCLCVP+G YG+K+ CPCYNNW TK GGPKCP
Sbjct: 53  EYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 54/66 (81%)

Query: 53  GSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKR 112
           G L+PQ+C  +C+ RCS T ++KPC+FFC KCC KCLCVP G +GNKQ+CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 113 GGPKCP 118
           G PKCP
Sbjct: 92  GRPKCP 97

Gibberellin-regulated protein that acts as a negative regulator of gibberellin-induced flowering and stem growth. May inhibit flowering and inflorescence growth via a pathway involving GAI and by enhancing FLC expression and repressing FT and LFY. Acts as a negative regulator in thermotolerance by resogulating both salicylic acid (SA) signaling and heat shock-protein accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana GN=At2g39540 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query: 54  SLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRG 113
           S     CG +C  RCSK    + CL +C  CC KC CVP+G +G+K  CPCY + K  +G
Sbjct: 23  SSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKG 82

Query: 114 GPKCP 118
           G KCP
Sbjct: 83  GSKCP 87

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1

 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 39/59 (66%)

Query: 60  CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           C  +C  RCSK  Y++ CL +C  CC KC CVP+G YGNK  CPCY + K  +G PKCP
Sbjct: 5   CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63

Prunus persica (taxid: 3760)

>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 4   KLSVVAF-SLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQ-ECG 61
           K++VVAF +L++ FL L +  A     +     + S   + N +         +P+  CG
Sbjct: 3   KMNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCG 62

Query: 62  PRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
             C  RCSKT  +K C   C  CCAKC CVP G  GN  SCPCY + +T     KCP
Sbjct: 63  HACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
59042581	117	GASA2-like protein [Pelargonium zonale]	0.957	0.965	0.714	2e-41
357509559	120	Gibberellin induced protein [Medicago tr	0.991	0.975	0.685	9e-41
255578447	116	GAST1 protein precursor, putative [Ricin	0.957	0.974	0.686	5e-40
388522253	118	unknown [Lotus japonicus]	0.974	0.974	0.685	5e-40
359482201	114	PREDICTED: protein GAST1-like [Vitis vin	0.966	1.0	0.728	1e-36
351724951	138	uncharacterized protein LOC100500485 pre	1.0	0.855	0.572	2e-36
383932364	111	GASA-like protein [Gossypium hirsutum] g	0.940	1.0	0.627	2e-35
356571977	120	PREDICTED: protein GAST1-like isoform 2	0.966	0.95	0.685	1e-34
449489498	117	PREDICTED: protein GAST1-like [Cucumis s	0.881	0.888	0.657	1e-34
356571975	137	PREDICTED: protein GAST1-like isoform 1	1.0	0.861	0.613	3e-34

>gi|59042581|gb|AAW83819.1| GASA2-like protein [Pelargonium zonale]

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/119 (71%), Positives = 94/119 (78%), Gaps = 6/119 (5%)

Query: 2   ASKLSVVAFSLVLIFLFLVENHATS--IVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQE 59
           A KL +V F LV++FL L +N ATS  I EAP+PQP   S    NH+ YG T+GSLQPQE
Sbjct: 3   AKKLCIVIFPLVIMFLLLQDNFATSSSITEAPSPQPHSQS----NHTMYGITEGSLQPQE 58

Query: 60  CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           CGPRC+ RCS TQY+KPCLFFC KCCAKCLCVP G YGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 59  CGPRCSERCSNTQYKKPCLFFCNKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 117

Source: Pelargonium zonale

Species: Pelargonium zonale

Genus: Pelargonium

Family: Geraniaceae

Order: Geraniales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509559|ref|XP_003625068.1| Gibberellin induced protein [Medicago truncatula] gi|87241442|gb|ABD33300.1| Gibberellin regulated protein [Medicago truncatula] gi|355500083|gb|AES81286.1| Gibberellin induced protein [Medicago truncatula]

 Score =  170 bits (431), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 94/121 (77%), Gaps = 4/121 (3%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHA---TSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQP 57
           MA K+ +V   LV + L  ++NHA    S VEAP PQP++SSG N     +G T+GSLQP
Sbjct: 1   MARKMCIVVLFLVQMLLLPLQNHAEIVVSTVEAPAPQPSKSSGTN-QFPNHGITEGSLQP 59

Query: 58  QECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKC 117
           QECGPRCT RCS TQY+KPCLFFC KCCAKCLCVP G+YGNKQ CPCYNNWKTKRGGPKC
Sbjct: 60  QECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKRGGPKC 119

Query: 118 P 118
           P
Sbjct: 120 P 120

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578447|ref|XP_002530088.1| GAST1 protein precursor, putative [Ricinus communis] gi|223530399|gb|EEF32287.1| GAST1 protein precursor, putative [Ricinus communis]

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/118 (68%), Positives = 93/118 (78%), Gaps = 5/118 (4%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQEC 60
           M  K S   F L L+ LF++E+HA S  EAP PQP +    N +   YG+TQGSLQPQ+C
Sbjct: 4   MMRKASFAMFVLALMLLFILESHA-STSEAPAPQPQQ----NSSLPKYGSTQGSLQPQDC 58

Query: 61  GPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           GP+CT RCSKTQY KPC+FFCQKCCAKCLCVP+G YGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 59  GPQCTRRCSKTQYHKPCMFFCQKCCAKCLCVPSGTYGNKQTCPCYNNWKTKRGGPKCP 116

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522253|gb|AFK49188.1| unknown [Lotus japonicus]

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 92/121 (76%), Gaps = 6/121 (4%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHATSIV---EAPTPQPAESSGRNGNHSTYGTTQGSLQP 57
           MA KL +V   LV + L  VENHA  +V   EAP+PQPA ++ +  NH   G T+GSLQP
Sbjct: 1   MAKKLCLVILCLVQMLLLPVENHAEIVVTPIEAPSPQPANNTAQFPNH---GITEGSLQP 57

Query: 58  QECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKC 117
           QECGPRC  RCS TQY+KPCLFFC KCCAKCLCVP G YGNKQ CPCYNNWKTKRGGPKC
Sbjct: 58  QECGPRCANRCSNTQYKKPCLFFCNKCCAKCLCVPPGLYGNKQVCPCYNNWKTKRGGPKC 117

Query: 118 P 118
           P
Sbjct: 118 P 118

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482201|ref|XP_003632726.1| PREDICTED: protein GAST1-like [Vitis vinifera] gi|147845801|emb|CAN80098.1| hypothetical protein VITISV_028566 [Vitis vinifera]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/118 (72%), Positives = 96/118 (81%), Gaps = 4/118 (3%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQEC 60
           MA KLS+V  SL ++ L LV+N+AT I EAPTPQP +S+  NG    +G TQGSL PQEC
Sbjct: 1   MARKLSIVMLSLSMMLLLLVQNNAT-ITEAPTPQPQQST--NG-FPMHGVTQGSLHPQEC 56

Query: 61  GPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
            PRCTTRCSKT Y+KPC+FFCQKCCAKCLCVP G YGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 57  APRCTTRCSKTAYKKPCMFFCQKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724951|ref|NP_001235028.1| uncharacterized protein LOC100500485 precursor [Glycine max] gi|255630452|gb|ACU15584.1| unknown [Glycine max]

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/138 (57%), Positives = 92/138 (66%), Gaps = 20/138 (14%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHA---TSIVEAPTPQPAESSGRNGNHS----------- 46
           MA KLS+V   +V + L LVEN A    S VEAP PQP +++    + +           
Sbjct: 1   MARKLSIVVLCIVQMLLLLVENDAEIVVSTVEAPAPQPHKNTTHTLSSAPAPLPHTNTTK 60

Query: 47  ------TYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQ 100
                  +G T+GSL+PQECGPRCT RCS TQY+KPCLFFCQKCCAKCLCV  G +GNKQ
Sbjct: 61  SHVPNLQHGITEGSLKPQECGPRCTARCSNTQYKKPCLFFCQKCCAKCLCVSPGTFGNKQ 120

Query: 101 SCPCYNNWKTKRGGPKCP 118
            CPCYNNWK KRGGPKCP
Sbjct: 121 VCPCYNNWKIKRGGPKCP 138

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383932364|gb|AFH57279.1| GASA-like protein [Gossypium hirsutum] gi|445069058|gb|AGE15503.1| GA-stimulated transcript-like protein 7 [Gossypium hirsutum]

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 86/118 (72%), Gaps = 7/118 (5%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQEC 60
           MA  L +V    +L+ + L E      ++A +P   +  G +GN   YG TQGSL+PQEC
Sbjct: 1   MAKSLVIVMLCFLLVIVLLGE------IQASSPSQKQRQGNHGN-GMYGATQGSLRPQEC 53

Query: 61  GPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           GPRCT RCS T Y+KPC+FFCQKCCAKCLCVP G YGNKQSCPCYNNWKTKRGGPKCP
Sbjct: 54  GPRCTQRCSATAYKKPCMFFCQKCCAKCLCVPPGTYGNKQSCPCYNNWKTKRGGPKCP 111

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571977|ref|XP_003554147.1| PREDICTED: protein GAST1-like isoform 2 [Glycine max]

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 93/124 (75%), Gaps = 10/124 (8%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHA---TSIVEAPTPQPAESSGRNGNHS---TYGTTQGS 54
           MA KLS+V   LV + L LVENHA    S VEA  PQP     +N  H+    +G T+GS
Sbjct: 1   MARKLSIVVLCLVQMLLLLVENHAEIVVSTVEASAPQPH----KNTTHTLFPNHGITEGS 56

Query: 55  LQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGG 114
           L+PQECGPRCT RCS TQY+KPCLFFCQKCCAKCLCVP G YGNKQ CPCYNNWKTKRGG
Sbjct: 57  LKPQECGPRCTARCSNTQYKKPCLFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGG 116

Query: 115 PKCP 118
           PKCP
Sbjct: 117 PKCP 120

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489498|ref|XP_004158330.1| PREDICTED: protein GAST1-like [Cucumis sativus]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 87/111 (78%), Gaps = 7/111 (6%)

Query: 13  VLIFLFLVEN-----HATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTR 67
           +L+F+ ++ N     H  +I EAPTPQP  SS  N ++  +G T+GSLQPQECG RCT R
Sbjct: 9   ILLFVVMLLNCVLLVHNLAISEAPTPQPQTSS--NYSNPMHGVTEGSLQPQECGARCTGR 66

Query: 68  CSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           CSKT ++KPC+FFCQKCCAKCLCVP G YGNKQ+CPCYN WKTKRGGPKCP
Sbjct: 67  CSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571975|ref|XP_003554146.1| PREDICTED: protein GAST1-like isoform 1 [Glycine max]

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 95/137 (69%), Gaps = 19/137 (13%)

Query: 1   MASKLSVVAFSLVLIFLFLVENHA---TSIVEAPTPQPAESSGRNGNHS----------- 46
           MA KLS+V   LV + L LVENHA    S VEA  PQP +++    +H+           
Sbjct: 1   MARKLSIVVLCLVQMLLLLVENHAEIVVSTVEASAPQPHKNTTHTLSHAPAPQPHKNTKS 60

Query: 47  -----TYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQS 101
                 +G T+GSL+PQECGPRCT RCS TQY+KPCLFFCQKCCAKCLCVP G YGNKQ 
Sbjct: 61  PVPNLQHGITEGSLKPQECGPRCTARCSNTQYKKPCLFFCQKCCAKCLCVPPGTYGNKQV 120

Query: 102 CPCYNNWKTKRGGPKCP 118
           CPCYNNWKTKRGGPKCP
Sbjct: 121 CPCYNNWKTKRGGPKCP 137

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
TAIR|locus:4010713737	103	AT3G10185 [Arabidopsis thalian	0.864	0.990	0.546	1.4e-30
TAIR|locus:2019195	101	GASA6 "AT1G74670" [Arabidopsis	0.593	0.693	0.722	2.1e-29
TAIR|locus:505006327	97	GASA5 "GAST1 protein homolog 5	0.559	0.680	0.681	1.2e-28
TAIR|locus:2052876	106	AT2G30810 [Arabidopsis thalian	0.567	0.632	0.701	2.8e-27
TAIR|locus:2150896	106	GASA4 "AT5G15230" [Arabidopsis	0.898	1.0	0.5	3.2e-26
TAIR|locus:2039732	87	AT2G39540 [Arabidopsis thalian	0.5	0.678	0.508	2.9e-16
TAIR|locus:4010713424	90	AT1G10588 [Arabidopsis thalian	0.550	0.722	0.5	4.7e-16
TAIR|locus:2199645	119	AT1G22690 "AT1G22690" [Arabido	0.974	0.966	0.358	9.8e-16
TAIR|locus:2147810	275	GASA14 "AT5G14920" [Arabidopsi	0.508	0.218	0.475	2.3e-15
TAIR|locus:505006706	89	AT5G59845 "AT5G59845" [Arabido	0.5	0.662	0.516	2.6e-15

TAIR|locus:4010713737 AT3G10185 [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 65/119 (54%), Positives = 78/119 (65%)

Query:     1 MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQ-E 59
             MA+KLS++ FS+V++ L L+  H   ++       AE             T+ ++ P  E
Sbjct:     1 MATKLSIIVFSIVVLHL-LLSAHMHFLINVC----AECE-----------TKSAIPPLLE 44

Query:    60 CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
             CGPRC  RCS TQY+KPCLFFC KCC KCLCVP G YGNKQ CPCYNNWKTK GGPKCP
Sbjct:    45 CGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2019195 GASA6 "AT1G74670" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 52/72 (72%), Positives = 60/72 (83%)

Query:    47 TYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYN 106
             +YG   GSL+  +CG +CT RCS T+Y KPC+FFCQKCCAKCLCVP G YGNKQ CPCYN
Sbjct:    32 SYGP--GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYN 89

Query:   107 NWKTKRGGPKCP 118
             NWKT++GGPKCP
Sbjct:    90 NWKTQQGGPKCP 101

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0009750 "response to fructose stimulus" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:505006327 GASA5 "GAST1 protein homolog 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 45/66 (68%), Positives = 54/66 (81%)

Query:    53 GSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKR 112
             G L+PQ+C  +C+ RCS T ++KPC+FFC KCC KCLCVP G +GNKQ+CPCYNNWKTK 
Sbjct:    32 GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query:   113 GGPKCP 118
             G PKCP
Sbjct:    92 GRPKCP 97

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

GO:0009408 "response to heat" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0010286 "heat acclimation" evidence=IMP

TAIR|locus:2052876 AT2G30810 [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 47/67 (70%), Positives = 54/67 (80%)

Query:    52 QGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTK 111
             +GSL+P+EC   C  RCS T +RKPCLFFC KCC KCLCVP+G YG+K+ CPCYNNW TK
Sbjct:    40 EGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTK 99

Query:   112 RGGPKCP 118
              GGPKCP
Sbjct:   100 EGGPKCP 106

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:2150896 GASA4 "AT5G15230" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 59/118 (50%), Positives = 70/118 (59%)

Query:     1 MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQEC 60
             MA     + F L LI LF+++    ++V A       SSG N   S      GSL+  +C
Sbjct:     1 MAKSYGAI-FLLTLIVLFMLQ----TMVMA-------SSGSNVKWSQKRYGPGSLKRTQC 48

Query:    61 GPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
                C  RC KTQY K C+ FC KCC KCLCVP G+YGNKQ C CYNNWKT+ GGPKCP
Sbjct:    49 PSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=TAS

GO:0045454 "cell redox homeostasis" evidence=IMP

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0009739 "response to gibberellin stimulus" evidence=IMP

TAIR|locus:2039732 AT2G39540 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query:    60 CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
             CG +C  RCSK    + CL +C  CC KC CVP+G +G+K  CPCY + K  +GG KCP
Sbjct:    29 CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:4010713424 AT1G10588 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 33/66 (50%), Positives = 40/66 (60%)

Query:    54 SLQPQECGPRCTTRCSKT-QYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKR 112
             S     CG +C+ RCSK  +  + CL  C  CC KC CVP+G YGNK  CPCY + K  +
Sbjct:    25 SADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSK 84

Query:   113 GGPKCP 118
             GG KCP
Sbjct:    85 GGSKCP 90

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2199645 AT1G22690 "AT1G22690" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 42/117 (35%), Positives = 56/117 (47%)

Query:     4 KLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHST--YGTTQGSLQPQECG 61
             K++VVAF  ++I   L+      +  +   + +  S  N  + T  +  T        CG
Sbjct:     3 KMNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCG 62

Query:    62 PRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
               C  RCSKT  +K C   C  CCAKC CVP G  GN  SCPCY + +T     KCP
Sbjct:    63 HACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:2147810 GASA14 "AT5G14920" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 29/61 (47%), Positives = 36/61 (59%)

Query:    59 ECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSC-PCYNNWKTKRGGPKC 117
             +C P C TRC +   +  C+  C  CC +C CVP G YGNK+ C  CY N KT+ G  KC
Sbjct:   215 DCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSKC 274

Query:   118 P 118
             P
Sbjct:   275 P 275

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:505006706 AT5G59845 "AT5G59845" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 31/60 (51%), Positives = 37/60 (61%)

Query:    60 CGPRCTTRCSKTQYRKPCLFFCQKCCAKC-LCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
             CG +C  RCSK   +  CL +C  CC KC  CVP+G YGNK  CPCY + K  +G  KCP
Sbjct:    30 CGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NMQ7	GASA6_ARATH	No assigned EC number	0.7575	0.5593	0.6534	yes	no
P27057	GAST1_SOLLC	No assigned EC number	0.8169	0.6016	0.6339	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025322001 SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (103 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	118
pfam02704	60	pfam02704, GASA, Gibberellin regulated protein	2e-28

>gnl|CDD|190394 pfam02704, GASA, Gibberellin regulated protein

 Score = 97.7 bits (244), Expect = 2e-28
 Identities = 42/60 (70%), Positives = 45/60 (75%)

Query: 59  ECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 118
           +CG +C  RCSKT  +KPCL  C KCCAKCLCVP G YGNK  CPCYNNWKT  G PKCP
Sbjct: 1   DCGGKCAVRCSKTSRKKPCLRACGKCCAKCLCVPPGTYGNKDECPCYNNWKTHGGRPKCP 60

This is the GASA gibberellin regulated cysteine rich protein family. The expression of these proteins is up-regulated by the plant hormone gibberellin, most of these proteins have some role in plant development. There are 12 cysteine residues conserved within the alignment giving the potential for these proteins to posses 6 disulphide bonds. Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
PF02704	60	GASA: Gibberellin regulated protein; InterPro: IPR	100.0
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	96.62

>PF02704 GASA: Gibberellin regulated protein; InterPro: IPR003854 This is the GASA gibberellin regulated cysteine rich protein family

Probab=100.00  E-value=1.1e-36  Score=202.85  Aligned_cols=60  Identities=57%  Similarity=1.363  Sum_probs=59.4

Q ss_pred             CChHHhhHHhhhCCCcchHHHHHHHhcccccccCCCCCCCCCCCCcccccccCCCCCCCC
Q 033495           59 ECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP  118 (118)
Q Consensus        59 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~GtyGnk~~CPCY~~~~t~~g~pKCP  118 (118)
                      ||+++|++|||+++++++||++||+||++|+|||||||||+|+||||+||+||+|+||||
T Consensus         1 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~GT~gn~~~CpCY~~m~t~~g~pKCP   60 (60)
T PF02704_consen    1 DCGGACSVRCSKASRKKRCMRACGTCCAKCKCVPPGTYGNKEECPCYRDMKTHGGKPKCP   60 (60)
T ss_pred             CcchHHHHHHhccCCchHHHHHHHHHhccCcccCCCCCCCCccCCChhhhhccCCCCCCc
Confidence            799999999999999999999999999999999999999999999999999999999999

The expression of these proteins is up-regulated by the plant hormone gibberellin, most of these proteins have some role in plant development. There are 12 cysteine residues conserved within the alignment giving the potential for these proteins to posses 6 disulphide bonds.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=96.62  E-value=0.0045  Score=44.06  Aligned_cols=26  Identities=31%  Similarity=0.327  Sum_probs=15.5

Q ss_pred             CchhH-HHHHHHHHHHHHHHHHHhhhc
Q 033495            1 MASKL-SVVAFSLVLIFLFLVENHATS   26 (118)
Q Consensus         1 Mak~~-~~~ll~l~~~~l~~~~v~a~~   26 (118)
                      ||.|. .+|.|+|+++||+.++|+|..
T Consensus         1 MaSK~~llL~l~LA~lLlisSevaa~~   27 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVAARE   27 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhhhHH
Confidence            88554 444455556666666666643

Some of them may be involved in resistance to environmental stress [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00