Citrus Sinensis ID: 033508

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MARNGERVGEISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
marngervgeisqpppqpqppppparassggrlrnradplLVVCRCYSVLTSLTALLCLAVNVLSAIRsfkngsdiFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Flexible Loop (DISEMBL)
marngervgeisqpppqpqpppppaRASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Low Complexity Region (SEG)
MARNGERVGEISqpppqpqpppppARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Disordered region (IsUnstruct)
*************************************DPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARV**
Disordered Region (DISOPRED)
***************************************LLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVL*
Disordered Region (DISEMBL)
*******************************RLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Disordered Region (DISPRO)
***********************************RADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARNGERVGEISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
297798566	200	hypothetical protein ARALYDRAFT_491320 [	0.889	0.525	0.6	1e-32
356521233	195	PREDICTED: uncharacterized protein LOC10	0.889	0.538	0.6	8e-32
30689751	200	uncharacterized protein [Arabidopsis tha	0.889	0.525	0.590	1e-31
186515959	199	uncharacterized protein [Arabidopsis tha	0.889	0.527	0.590	1e-31
351721883	195	uncharacterized protein LOC100306208 [Gl	0.703	0.425	0.759	1e-31
225465783	196	PREDICTED: uncharacterized protein LOC10	0.898	0.540	0.573	3e-31
255563364	203	conserved hypothetical protein [Ricinus	0.762	0.443	0.677	4e-30
388520639	197	unknown [Lotus japonicus]	0.661	0.395	0.769	5e-30
388519719	197	unknown [Lotus japonicus]	0.661	0.395	0.769	5e-30
388518145	203	unknown [Lotus japonicus]	0.661	0.384	0.769	9e-30

>gi|297798566|ref|XP_002867167.1| hypothetical protein ARALYDRAFT_491320 [Arabidopsis lyrata subsp. lyrata] gi|297313003|gb|EFH43426.1| hypothetical protein ARALYDRAFT_491320 [Arabidopsis lyrata subsp. lyrata]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/105 (60%), Positives = 81/105 (77%)

Query: 11  ISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSF 70
           + +P    + P  P+  S+  +L NRADP LVVCRC+SV+TSL A+LC+ VNVL+A+RSF
Sbjct: 1   MDRPEEIEESPAGPSSGSAKSKLANRADPFLVVCRCFSVVTSLIAILCVVVNVLAAVRSF 60

Query: 71  KNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           ++  D+FDGIFRCYAVVIA FV L ETEW F+LKF+KVLE+W  R
Sbjct: 61  RDSHDLFDGIFRCYAVVIACFVVLVETEWGFILKFSKVLEFWAGR 105

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521233|ref|XP_003529261.1| PREDICTED: uncharacterized protein LOC100793094 [Glycine max]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 83/115 (72%), Gaps = 10/115 (8%)

Query: 1   MARNGERVGEISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLA 60
           M+RNG+ V          +    P+  SS   +RNR DP LV CRC+S  TSL A+LC+A
Sbjct: 1   MSRNGDVV----------EQNAAPSTTSSSSTIRNRTDPFLVACRCFSFFTSLAAILCIA 50

Query: 61  VNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           VN LSA+RSFK+ SDIFDGIFRCYAV++A FV LAETEW F+LKF+KVLEYW AR
Sbjct: 51  VNFLSAVRSFKHASDIFDGIFRCYAVLVAAFVVLAETEWSFILKFSKVLEYWAAR 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30689751|ref|NP_849487.1| uncharacterized protein [Arabidopsis thaliana] gi|26451440|dbj|BAC42819.1| unknown protein [Arabidopsis thaliana] gi|107738160|gb|ABF83652.1| At4g33625 [Arabidopsis thaliana] gi|332660855|gb|AEE86255.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/105 (59%), Positives = 80/105 (76%)

Query: 11  ISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSF 70
           + +     + P  P+  S+  +L NRADP LVVCRC+S++TSL A+LC+ VNVL+A+RSF
Sbjct: 1   MDRTEEIEESPAGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSF 60

Query: 71  KNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           ++  D+FDGIFRCYAVVIA FV L ETEW F+LKF+KVLEYW  R
Sbjct: 61  RDSHDLFDGIFRCYAVVIACFVVLVETEWGFILKFSKVLEYWAGR 105

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186515959|ref|NP_001119110.1| uncharacterized protein [Arabidopsis thaliana] gi|332660856|gb|AEE86256.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/105 (59%), Positives = 80/105 (76%)

Query: 11  ISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSF 70
           + +     + P  P+  S+  +L NRADP LVVCRC+S++TSL A+LC+ VNVL+A+RSF
Sbjct: 1   MDRTEEIEESPAGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSF 60

Query: 71  KNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           ++  D+FDGIFRCYAVVIA FV L ETEW F+LKF+KVLEYW  R
Sbjct: 61  RDSHDLFDGIFRCYAVVIACFVVLVETEWGFILKFSKVLEYWAGR 105

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721883|ref|NP_001235433.1| uncharacterized protein LOC100306208 [Glycine max] gi|255627869|gb|ACU14279.1| unknown [Glycine max]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/83 (75%), Positives = 73/83 (87%)

Query: 33  LRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFV 92
           +RNRADP LV CRC+S LTSL A+LC+AVNVLSA+RSFK+ SDIFDGIFRCYAV+IA F 
Sbjct: 23  IRNRADPFLVACRCFSFLTSLAAILCIAVNVLSAVRSFKHASDIFDGIFRCYAVLIAAFA 82

Query: 93  ALAETEWQFVLKFTKVLEYWVAR 115
            LAETEW F++KF+KVLEYW AR
Sbjct: 83  VLAETEWSFIIKFSKVLEYWAAR 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465783|ref|XP_002268351.1| PREDICTED: uncharacterized protein LOC100267500 [Vitis vinifera] gi|296087430|emb|CBI34019.3| unnamed protein product [Vitis vinifera]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 84/115 (73%), Gaps = 9/115 (7%)

Query: 1   MARNGERVGEISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLA 60
           MA NG+  G          P    + + +  R+R R DPLL+VCRC+S +T+LTA+LC+ 
Sbjct: 1   MAGNGDEEG---------LPRAASSTSGAAARVRARGDPLLIVCRCFSFITALTAILCIC 51

Query: 61  VNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           VNVLSA+RSFK+GSD+FDGIFRCYAVVIA FV +AETEW F++KF K+LEYW  R
Sbjct: 52  VNVLSAVRSFKDGSDVFDGIFRCYAVVIALFVVVAETEWGFIMKFWKMLEYWAGR 106

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563364|ref|XP_002522685.1| conserved hypothetical protein [Ricinus communis] gi|223538161|gb|EEF39772.1| conserved hypothetical protein [Ricinus communis]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 76/90 (84%)

Query: 26  RASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYA 85
           R  S  R+R  ADPLLVVCRC+S +T+LTA+LC+AVN LSA+RSF++GSD+FDGIFRCYA
Sbjct: 23  RLGSSSRVRRGADPLLVVCRCFSFVTALTAILCIAVNALSAVRSFRDGSDVFDGIFRCYA 82

Query: 86  VVIAFFVALAETEWQFVLKFTKVLEYWVAR 115
           V+IAF V +AETEW F++KF +VLEYW  R
Sbjct: 83  VLIAFSVVVAETEWGFIVKFWQVLEYWAGR 112

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520639|gb|AFK48381.1| unknown [Lotus japonicus]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 70/78 (89%)

Query: 38  DPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAET 97
           DP LV C+C+SV+TSL A+LC+AVNVLSA+RSFKN SDIFDGIFRCYAVVIA FV LAET
Sbjct: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89

Query: 98  EWQFVLKFTKVLEYWVAR 115
           EW F++KF++VLEYW AR
Sbjct: 90  EWSFIIKFSQVLEYWAAR 107

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519719|gb|AFK47921.1| unknown [Lotus japonicus]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 70/78 (89%)

Query: 38  DPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAET 97
           DP LV C+C+SV+TSL A+LC+AVNVLSA+RSFKN SDIFDGIFRCYAVVIA FV LAET
Sbjct: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89

Query: 98  EWQFVLKFTKVLEYWVAR 115
           EW F++KF++VLEYW AR
Sbjct: 90  EWSFIIKFSQVLEYWAAR 107

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518145|gb|AFK47134.1| unknown [Lotus japonicus]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 70/78 (89%)

Query: 38  DPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAET 97
           DP LV C+C+SV+TSL A+LC+AVNVLSA+RSFKN SDIFDGIFRCYAVVIA FV LAET
Sbjct: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89

Query: 98  EWQFVLKFTKVLEYWVAR 115
           EW F++KF++VLEYW AR
Sbjct: 90  EWSFIIKFSQVLEYWAAR 107

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
TAIR|locus:1005716273	200	AT4G33625 "AT4G33625" [Arabido	0.796	0.47	0.663	3.8e-30

TAIR|locus:1005716273 AT4G33625 "AT4G33625" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 65/98 (66%), Positives = 79/98 (80%)

Query:    25 ARASSGG---RLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIF 81
             A  SSG    +L NRADP LVVCRC+S++TSL A+LC+ VNVL+A+RSF++  D+FDGIF
Sbjct:    12 AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query:    82 RCYAVVIAFFVALAETEWQFVLKFTKVLEYWVAR-VLQ 118
             RCYAVVIA FV L ETEW F+LKF+KVLEYW  R +LQ
Sbjct:    72 RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQ 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.139   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      118       106   0.00091  102 3  11 22  0.45    29
                                                     29  0.39    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  118 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.80u 0.11s 9.91t   Elapsed:  00:00:01
  Total cpu time:  9.80u 0.11s 9.91t   Elapsed:  00:00:01
  Start:  Thu May  9 16:17:12 2013   End:  Thu May  9 16:17:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.7__753__AT4G33625.1 annotation not avaliable (200 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	99.05
PF06151	414	Trehalose_recp: Trehalose receptor; InterPro: IPR0	80.79

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=99.05  E-value=6.5e-10  Score=80.01  Aligned_cols=68  Identities=24%  Similarity=0.472  Sum_probs=56.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhccCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccC
Q 033508           46 CYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARVL  117 (118)
Q Consensus        46 ~fs~vTa~~AlLCi~vNvlSavrsf~~~~dif~GI~RcYaV~iA~fVvlaETEW~~i~kF~kvLeyW~gRGm  117 (118)
                      .+.+++.++|+++++..+++.+.+    .++-+.++++|.++++++++++|.+|.++.|++++|+.|.|||+
T Consensus         5 ~~r~~~~~~~~~~i~~gi~~l~~~----~~~~~~i~~~Y~i~fg~ll~~~E~~~~~i~~~~~FL~~~~GRGl   72 (136)
T PF08507_consen    5 IFRILNIIAGILLILAGILSLFNS----FSFSSFILGVYCILFGLLLILAEFRWPFIRKYFGFLYSYIGRGL   72 (136)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHhHHHhHHHHHH
Confidence            455666666666777777777665    33447789999999999999999999999999999999999996

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

>PF06151 Trehalose_recp: Trehalose receptor; InterPro: IPR009318 In Drosophila, taste is perceived by gustatory neurons located in sensilla distributed on several different appendages throughout the body of the animal

Probab=80.79  E-value=12  Score=32.27  Aligned_cols=36  Identities=14%  Similarity=0.291  Sum_probs=30.5

Q ss_pred             cccch-hhhhHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 033508           75 DIFDG-IFRCYAVVIAFFVALAETEWQFVLKFTKVLE  110 (118)
Q Consensus        75 dif~G-I~RcYaV~iA~fVvlaETEW~~i~kF~kvLe  110 (118)
                      +-..+ +|-+...++.++....=.+|..+|+-|.-.|
T Consensus        90 ~~~~~liFy~~~~~~~i~Fl~LAr~Wp~lm~~W~~vE  126 (414)
T PF06151_consen   90 NNIASLIFYVVCLLISILFLRLARRWPQLMREWSRVE  126 (414)
T ss_pred             eehhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            44455 6889999999888889999999999998876

This family represents the taste receptor sensitive to trehalose [,].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00