Citrus Sinensis ID: 033836

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNKGE
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHcHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
methkgkadvssAEAVFLgalapgvngptwtTLKSAFVMLGVCLAVMFGlafsssdsslILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEmnlmpndhqrsnkge
Flexible Loop (DISEMBL)
methkgkadvssaEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMnlmpndhqrsnkge
Low Complexity Region (SEG)
METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGflllialtlffllSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNKGE
Disordered region (IsUnstruct)
**************AVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQML****************
Disordered Region (DISOPRED)
****************FLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQM*****************
Disordered Region (DISEMBL)
**********SSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPN*********
Disordered Region (DISPRO)
***********SAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMN*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNKGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
449457745	111	PREDICTED: uncharacterized protein LOC10	0.990	0.981	0.660	9e-34
297845770	105	hypothetical protein ARALYDRAFT_890362 [	0.954	1.0	0.638	6e-32
18396709	102	uncharacterized protein [Arabidopsis tha	0.918	0.990	0.653	1e-31
224079193	109	predicted protein [Populus trichocarpa]	0.972	0.981	0.694	5e-30
351734480	107	uncharacterized protein LOC100527078 [Gl	0.872	0.897	0.770	1e-27
356548702	107	PREDICTED: uncharacterized protein LOC10	0.881	0.906	0.742	3e-26
388499002	117	unknown [Medicago truncatula]	0.872	0.820	0.75	3e-26
297725573	109	Os07g0299600 [Oryza sativa Japonica Grou	0.954	0.963	0.485	1e-18
226531550	109	uncharacterized protein LOC100278270 [Ze	0.972	0.981	0.462	1e-17
357157937	109	PREDICTED: uncharacterized protein LOC10	0.909	0.917	0.46	4e-16

>gi|449457745|ref|XP_004146608.1| PREDICTED: uncharacterized protein LOC101210942 [Cucumis sativus] gi|449508908|ref|XP_004163441.1| PREDICTED: uncharacterized LOC101210942 [Cucumis sativus]

 Score =  147 bits (371), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/109 (66%), Positives = 86/109 (78%)

Query: 2   ETHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLIL 61
           +   G  +VSSA+AV LGALAPGVNGPTWTTLKSAF+MLG+CL +M  LAFSSSDS LIL
Sbjct: 3   DNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLIL 62

Query: 62  HVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNKGE 110
           HV FL++I  TLF LL+WFL+QTGLVSV++QM E+ L P    +S K E
Sbjct: 63  HVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 111

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845770|ref|XP_002890766.1| hypothetical protein ARALYDRAFT_890362 [Arabidopsis lyrata subsp. lyrata] gi|297336608|gb|EFH67025.1| hypothetical protein ARALYDRAFT_890362 [Arabidopsis lyrata subsp. lyrata]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 83/105 (79%)

Query: 1   METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLI 60
           ME  + K  +SS EAVFLGALAPGVNGPTW TL+ AF++LG+CLA M  +AF+S  S L+
Sbjct: 1   MEKKEKKCQISSTEAVFLGALAPGVNGPTWNTLRIAFLLLGLCLAFMLSVAFTSGQSMLL 60

Query: 61  LHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQR 105
           +HVGFL++IA TLF LL+WFLAQTGLV VE QM E+NL P+D  +
Sbjct: 61  VHVGFLIVIASTLFILLNWFLAQTGLVQVETQMQELNLSPSDKTK 105

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396709|ref|NP_564302.1| uncharacterized protein [Arabidopsis thaliana] gi|9795612|gb|AAF98430.1|AC021044_9 Unknown protein [Arabidopsis thaliana] gi|21592484|gb|AAM64434.1| unknown [Arabidopsis thaliana] gi|26453002|dbj|BAC43577.1| unknown protein [Arabidopsis thaliana] gi|28973081|gb|AAO63865.1| unknown protein [Arabidopsis thaliana] gi|332192815|gb|AEE30936.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/101 (65%), Positives = 83/101 (82%)

Query: 5   KGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVG 64
           + K+ +SS EAVFLGALAPGVNGPTW TL+ AF++LG+CLA M  +AF+S  S L++HVG
Sbjct: 2   EKKSQISSTEAVFLGALAPGVNGPTWNTLRFAFLLLGLCLAFMLSVAFTSGQSMLLVHVG 61

Query: 65  FLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQR 105
           FL++IA TLF LL+WFLAQTGLV VE QM E+NL+PND  +
Sbjct: 62  FLIVIASTLFILLNWFLAQTGLVQVETQMQELNLLPNDKTK 102

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079193|ref|XP_002305788.1| predicted protein [Populus trichocarpa] gi|222848752|gb|EEE86299.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/108 (69%), Positives = 90/108 (83%), Gaps = 1/108 (0%)

Query: 1   METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLI 60
           ME  K ++D+SSA+AV LGALAPGVNGPTW TLKSAF++LG+CLA+M  LAFSSSDSSL+
Sbjct: 1   MEKDK-QSDISSAQAVLLGALAPGVNGPTWNTLKSAFLLLGLCLAMMLVLAFSSSDSSLV 59

Query: 61  LHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNK 108
           +HVGFL+ I  TLF LLSWFL+QTGLVS+EHQM EM+L+P D     K
Sbjct: 60  IHVGFLVTITATLFLLLSWFLSQTGLVSIEHQMREMDLVPEDQGAKQK 107

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734480|ref|NP_001238353.1| uncharacterized protein LOC100527078 [Glycine max] gi|255631506|gb|ACU16120.1| unknown [Glycine max]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 77/96 (80%)

Query: 3   THKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILH 62
           T     DVSSA AV LGALAPGVNGPTW TLKS F+MLG+CL VM  LAFSSSDS LI H
Sbjct: 6   TESEAGDVSSATAVLLGALAPGVNGPTWITLKSTFLMLGLCLTVMLALAFSSSDSWLIFH 65

Query: 63  VGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNL 98
           V FL+LI LTLF LLSWFLAQTGLVSVEHQM EM L
Sbjct: 66  VAFLVLICLTLFLLLSWFLAQTGLVSVEHQMREMGL 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548702|ref|XP_003542739.1| PREDICTED: uncharacterized protein LOC100775323 [Glycine max]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/97 (74%), Positives = 76/97 (78%)

Query: 2   ETHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLIL 61
            T     DVSSA AV LGALAPGVNGPTW TLKS F++LG+CLAVM  LAFSSSDS LI 
Sbjct: 5   NTGSDAGDVSSATAVLLGALAPGVNGPTWITLKSTFLLLGLCLAVMLALAFSSSDSWLIF 64

Query: 62  HVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNL 98
           HV FL+LI L LF LLSWFL QTGLVSVEHQM EM L
Sbjct: 65  HVAFLVLICLILFLLLSWFLTQTGLVSVEHQMREMGL 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499002|gb|AFK37567.1| unknown [Medicago truncatula]

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 81/96 (84%)

Query: 13  AEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALT 72
           A AVFLGALAPGVNGPTW TLKSAF+MLG+CLAVM GLAFSSSDS L+ HV FL+LI++T
Sbjct: 19  ATAVFLGALAPGVNGPTWNTLKSAFLMLGLCLAVMLGLAFSSSDSWLVFHVVFLVLISVT 78

Query: 73  LFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNK 108
           LF LLSWFL++TGLVSVEHQM EM L   D   +NK
Sbjct: 79  LFLLLSWFLSETGLVSVEHQMREMGLEAKDPLEANK 114

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297725573|ref|NP_001175150.1| Os07g0299600 [Oryza sativa Japonica Group] gi|34394297|dbj|BAC84779.1| hypothetical protein [Oryza sativa Japonica Group] gi|125558028|gb|EAZ03564.1| hypothetical protein OsI_25700 [Oryza sativa Indica Group] gi|255677683|dbj|BAH93878.1| Os07g0299600 [Oryza sativa Japonica Group]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 65/105 (61%)

Query: 5   KGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVG 64
           +   ++SSAEAV +GAL+ GVN PTW  LK  F++L  C   M  LAF SSD  +I HV 
Sbjct: 4   RSSNEISSAEAVLVGALSSGVNAPTWFVLKITFLLLAFCFTAMLSLAFFSSDFMIIAHVL 63

Query: 65  FLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNKG 109
            L+ I   LF LL+ FLA+TGLV VE QM EM +   +    +KG
Sbjct: 64  LLVTIGTVLFVLLNRFLAETGLVPVEQQMKEMGIHKIEATEKDKG 108

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226531550|ref|NP_001145072.1| uncharacterized protein LOC100278270 [Zea mays] gi|195650667|gb|ACG44801.1| hypothetical protein [Zea mays] gi|414884304|tpg|DAA60318.1| TPA: hypothetical protein ZEAMMB73_072254 [Zea mays]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 1   METHKGKADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLI 60
           ME  +   +VSSAEAV +GAL+ GVN PTW  LK  F++L +C   M  LAFSS +  ++
Sbjct: 1   MEGRRSN-EVSSAEAVLVGALSSGVNAPTWFVLKITFLLLALCFTAMLALAFSSKNFVIV 59

Query: 61  LHVGFLLLIALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNK 108
            HV  L+ I   LF LL+ FLA+ GLV VE QM EM +   +    +K
Sbjct: 60  AHVLLLVTIGTVLFVLLNRFLAEVGLVPVEQQMKEMGIHKTEATDEDK 107

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357157937|ref|XP_003577963.1| PREDICTED: uncharacterized protein LOC100840358 isoform 1 [Brachypodium distachyon] gi|357157940|ref|XP_003577964.1| PREDICTED: uncharacterized protein LOC100840358 isoform 2 [Brachypodium distachyon] gi|357157942|ref|XP_003577965.1| PREDICTED: uncharacterized protein LOC100840358 isoform 3 [Brachypodium distachyon]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 62/100 (62%)

Query: 9   DVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLL 68
           ++SSAEA+ +GAL+ GVN PTW  L+  F++L +C   M  LAF SSD  +  HV  L+ 
Sbjct: 8   EISSAEAILVGALSSGVNAPTWIVLQITFLLLALCFTAMLYLAFFSSDFVIAGHVLLLVT 67

Query: 69  IALTLFFLLSWFLAQTGLVSVEHQMLEMNLMPNDHQRSNK 108
           I   LF LL+ FLA+TG V VE QM EM +   +    +K
Sbjct: 68  IGAVLFVLLNRFLAETGFVPVEQQMQEMGIHKPESTEKDK 107

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:2032231	102	AT1G28250 [Arabidopsis thalian	0.872	0.941	0.593	9.4e-27

TAIR|locus:2032231 AT1G28250 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 57/96 (59%), Positives = 70/96 (72%)

Query:     7 KADVSSAEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGXX 66
             K+ +SS EAVFLGALAPGVNGPTW TL+ AF++LG+CLA M  +AF+S  S L++HVG  
Sbjct:     4 KSQISSTEAVFLGALAPGVNGPTWNTLRFAFLLLGLCLAFMLSVAFTSGQSMLLVHVGFL 63

Query:    67 XXXXXXXXXXXSWFLAQTGLVSVEHQMLEMNLMPND 102
                        +WFLAQTGLV VE QM E+NL+PND
Sbjct:    64 IVIASTLFILLNWFLAQTGLVQVETQMQELNLLPND 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.130   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110        97   0.00091  102 3  11 22  0.37    30
                                                     29  0.44    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  109 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.66u 0.16s 7.82t   Elapsed:  00:00:00
  Total cpu time:  7.66u 0.16s 7.82t   Elapsed:  00:00:00
  Start:  Fri May 10 05:31:15 2013   End:  Fri May 10 05:31:15 2013

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
PF08636	75	Pkr1: ER protein Pkr1; InterPro: IPR013945 Pkr1 ha	97.46
PF14023	209	DUF4239: Protein of unknown function (DUF4239)	80.61

>PF08636 Pkr1: ER protein Pkr1; InterPro: IPR013945 Pkr1 has been identified as an ER protein of unknown function

Probab=97.46  E-value=0.001  Score=45.70  Aligned_cols=60  Identities=23%  Similarity=0.425  Sum_probs=50.0

Q ss_pred             hhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 033836           19 GALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSSLILHVGFLLLIALTLFFLLSWFLAQTG   85 (110)
Q Consensus        19 GALa~GVN~PTW~~Lki~fllL~lcla~ML~lAf~ssd~~l~~HV~~Lv~i~~tLF~LLnwfLa~tg   85 (110)
                      .-+-||+|.-=+.+.+.+|..|-+|+.+++..-.       -.|+..|..|+..|+.-.|||..|-.
T Consensus        11 sIftPG~tp~li~a~n~sF~~L~~~l~~Ll~~t~-------niHfivL~~l~~~Lw~Sv~WFi~EL~   70 (75)
T PF08636_consen   11 SIFTPGTTPTLIIATNVSFAALFLVLLALLFLTY-------NIHFIVLSFLALGLWASVNWFIAELK   70 (75)
T ss_pred             HccCCCCChHHHHHHHHHHHHHHHHHHHHHHHcc-------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4478999855577889999999888887776644       37999999999999999999998864

>PF14023 DUF4239: Protein of unknown function (DUF4239)

Probab=80.61  E-value=13  Score=27.28  Aligned_cols=63  Identities=25%  Similarity=0.323  Sum_probs=32.4

Q ss_pred             hHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCch---HHHHHHHHHHHHHHHHHHH
Q 033836           13 AEAVFLGALAPGVNGPTWTTLKSAFVMLGVCLAVMFGLAFSSSDSS---LILHVGFLLLIALTLFFLL   77 (110)
Q Consensus        13 aeAVllGALa~GVN~PTW~~Lki~fllL~lcla~ML~lAf~ssd~~---l~~HV~~Lv~i~~tLF~LL   77 (110)
                      +-.--+.+...++..|-|..+=+...++.+++  +++.++...++.   .+.-+.+-..++.++|+++
T Consensus       123 ~R~~Rl~~~~~~lp~~~w~vl~~~~~~~~i~f--~~~~~~~~~~~~~~~~~~~~l~a~~i~~~l~li~  188 (209)
T PF14023_consen  123 ARRTRLSQAQSSLPPPLWIVLLILAALLLIGF--LLASALFLGPNRRAHLIAIALFAASIALALFLIL  188 (209)
T ss_pred             HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHH--HHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            33445667778999999987655433333333  222233332222   1222333355667777755

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00