Citrus Sinensis ID: 033914

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE
Secondary Structure (PSIPRED)
cHHHHHHHHHHcccEEEEccccccccccccccccHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHHHccHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccccEEEEHHEEccccccccccccHHHHHHHHHEEcEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
MLDAVRLNMRIRGRIAVCGMISqynleksegVHNLMQVVGKRIRmegflagdfyhqYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE
Flexible Loop (DISEMBL)
mldavrlnmrirgriaVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPsalvgiftgqnvgKQLVVIARE
Low Complexity Region (SEG)
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE
Disordered region (IsUnstruct)
****VRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI***
Disordered Region (DISOPRED)
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR*
Disordered Region (DISEMBL)
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE
Disordered Region (DISPRO)
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
Q39173	343	NADP-dependent alkenal do	yes	no	1.0	0.317	0.724	1e-41
Q39172	345	NADP-dependent alkenal do	no	no	1.0	0.315	0.678	6e-40
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	1.0	0.318	0.633	5e-38
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.990	0.309	0.422	3e-17
P76113	345	NADPH-dependent curcumin	N/A	no	0.981	0.310	0.371	1e-12
P97584	329	Prostaglandin reductase 1	yes	no	0.889	0.294	0.385	2e-11
O34812	339	Putative NADP-dependent o	yes	no	0.963	0.309	0.351	2e-11
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.935	0.310	0.394	4e-11
Q29073	329	Prostaglandin reductase 1	yes	no	0.935	0.310	0.346	4e-09
Q14914	329	Prostaglandin reductase 1	yes	no	0.853	0.282	0.366	8e-09

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 92/109 (84%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKF
Sbjct: 235 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKF 294

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LELV+  IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVIARE
Sbjct: 295 LELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  162 bits (410), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 74/109 (67%), Positives = 91/109 (83%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NM + GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +Y KF
Sbjct: 237 MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKF 296

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE V+  I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+ARE
Sbjct: 297 LEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  155 bits (393), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 94/109 (86%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           ML+AV  NMR+ GRIAVCGM+SQY+L++ EGVHNL++++ K+IRM+GF+  D+YH YPKF
Sbjct: 234 MLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKF 293

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE+V+  IKEGK+ YVEDI+EGLE APSAL+G++ G+NVG Q+V ++RE
Sbjct: 294 LEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 1/109 (0%)

Query: 2   LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQY-PKF 60
           +DAV  NM ++GRI  CG ISQYN      V NL  V+ K + ++GF+  +   QY  ++
Sbjct: 241 MDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQY 300

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
            E + + I EGK+ Y  D+ +GLE AP A +G+  G+N GK +V IA E
Sbjct: 301 FEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 6/113 (5%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYN-LEKSEGVHNL----MQVVGKRIRMEGFL-AGDFY 54
           + DAV   +    RI VCG++S YN  E   G   L      V+ KRIR++GF+ A D+ 
Sbjct: 230 VFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYG 289

Query: 55  HQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA 107
           H+  +F   + + +KE K+ Y E+I +GLE AP   +G+  G+N GK ++ +A
Sbjct: 290 HRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 12/109 (11%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLE------KSEGVHNLMQVVGKRIRMEGFLAGDFYHQ 56
           + V L M+  GRIA+CG ISQYN         S  V     ++ +++RMEGF+   +  +
Sbjct: 224 NTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEV-----IIYQQLRMEGFIVTRWQGE 278

Query: 57  Y-PKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
              K L  +M  + EGK+ Y E I EG EK P+A +G+  G N+GK +V
Sbjct: 279 VRQKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSE---GVHNLMQVVGKRIRMEGFLAGDFYHQYPK 59
           DAV   +    RI VCG IS YN E      G     +++  +  M+GF+  D+  ++ +
Sbjct: 229 DAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSE 288

Query: 60  FLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA 107
             + +   +K GKL Y E I EG E  P A +G+F G+N GKQL+ ++
Sbjct: 289 GAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLAGDFYHQY-PKF 60
           +AV L M+  GRIA+CG ISQYN           +VV  +++RMEGF+   +  +   K 
Sbjct: 224 NAVILQMKTFGRIAICGAISQYNRTGPCPQGPAPEVVIYQQLRMEGFIVNRWQGEVRQKA 283

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           L  +M  + EGK+   E + EG EK P+A +G+  G+N+GK +V
Sbjct: 284 LTELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLAGDFYHQY-PKF 60
           +AV   M+  GRIA+CG IS YN           +VV    +  +GF+   +  +   K 
Sbjct: 224 NAVTSQMKKFGRIAICGAISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKA 283

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           L  +++ + EGK+ Y E I EG E  P+A +G+  G+N+GK +V
Sbjct: 284 LRDLLKWVSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q14914|PTGR1_HUMAN Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 8/101 (7%)

Query: 9   MRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLA----GDFYHQYPKFLEL 63
           M+  GRIA+CG IS YN           ++V  + +RME F+     GD      K L+ 
Sbjct: 230 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKD 286

Query: 64  VMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           +++ + EGK+ Y E I EG E  P+A +G+  G N+GK +V
Sbjct: 287 LLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha (By similarity). Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
255577891	345	alcohol dehydrogenase, putative [Ricinus	1.0	0.315	0.788	7e-45
225434189	345	PREDICTED: NADP-dependent alkenal double	1.0	0.315	0.724	5e-41
886430	342	zeta-crystallin homologue [Arabidopsis t	1.0	0.318	0.724	5e-40
15237890	343	2-alkenal reductase [Arabidopsis thalian	1.0	0.317	0.724	5e-40
21554121	343	quinone oxidoreductase-like protein [Ara	1.0	0.317	0.724	6e-40
224092848	348	predicted protein [Populus trichocarpa]	1.0	0.313	0.706	2e-39
224117858	348	predicted protein [Populus trichocarpa]	1.0	0.313	0.678	2e-39
255577879	352	alcohol dehydrogenase, putative [Ricinus	1.0	0.309	0.697	3e-39
308943732	347	alcohol dehydrogenase [Camellia sinensis	1.0	0.314	0.678	3e-39
444302246	351	Chain A, X-ray Crystal Structure Of A Do	1.0	0.310	0.678	3e-39

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  184 bits (466), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 86/109 (78%), Positives = 98/109 (89%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNMRIRGRIAVCGMISQYNL+K EGVHNL  ++GKRIRMEGFLAGDFYH YP  
Sbjct: 237 MLDAVLLNMRIRGRIAVCGMISQYNLDKPEGVHNLSAIIGKRIRMEGFLAGDFYHLYPNL 296

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           L++V+  IKEGK+VYVED+AEGLE AP+AL+GIF G+NVGKQLVV+ARE
Sbjct: 297 LDMVIPYIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVVVARE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 96/109 (88%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NMR+ GRIAVCGMISQYNLE+ EGV NL  +V KRIRMEGFL  D+YH YPKF
Sbjct: 237 MLDAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKF 296

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           L+L+M  I+EGK+VYVEDIAEGLE AP+AL+G+++G+NVGKQ+VV+ARE
Sbjct: 297 LDLIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|886430|emb|CAA89262.1| zeta-crystallin homologue [Arabidopsis thaliana]

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 92/109 (84%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKF
Sbjct: 234 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKF 293

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LELV+  IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVIARE
Sbjct: 294 LELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 342

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237890|ref|NP_197201.1| 2-alkenal reductase [Arabidopsis thaliana] gi|21431800|sp|Q39173.2|P2_ARATH RecName: Full=NADP-dependent alkenal double bond reductase P2 gi|9755700|emb|CAC01712.1| quinone oxidoreductase-like protein [Arabidopsis thaliana] gi|17529038|gb|AAL38729.1| putative quinone oxidoreductase [Arabidopsis thaliana] gi|20259087|gb|AAM14259.1| putative quinone oxidoreductase [Arabidopsis thaliana] gi|332004984|gb|AED92367.1| 2-alkenal reductase [Arabidopsis thaliana]

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 92/109 (84%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKF
Sbjct: 235 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKF 294

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LELV+  IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVIARE
Sbjct: 295 LELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554121|gb|AAM63201.1| quinone oxidoreductase-like protein [Arabidopsis thaliana]

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 92/109 (84%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKF
Sbjct: 235 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYPKF 294

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LELV+  IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVIARE
Sbjct: 295 LELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092848|ref|XP_002309722.1| predicted protein [Populus trichocarpa] gi|118483208|gb|ABK93507.1| unknown [Populus trichocarpa] gi|222852625|gb|EEE90172.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/109 (70%), Positives = 93/109 (85%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV  NMR RGRIAVCGMISQYNL+K EGV NLM VV KR+R+EGF+  D+Y QYPKF
Sbjct: 240 MLDAVLPNMRFRGRIAVCGMISQYNLDKPEGVFNLMTVVYKRVRIEGFVVTDYYDQYPKF 299

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           L+ V+  I+EGK+ Y+EDI+EGLE  P+ALVG+F+GQNVGK+LVV+ARE
Sbjct: 300 LDFVLPCIREGKIKYMEDISEGLENGPAALVGLFSGQNVGKKLVVVARE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 94/109 (86%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNMR+RGRI+VCGM+SQYNLE+ EGVHNLM +V KRI MEGFL  DF+H +PK+
Sbjct: 240 MLDAVVLNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKY 299

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           L++V+  IK+GK+VYVEDIAEGLE AP+AL G+F G+N+GKQ+V ++ E
Sbjct: 300 LDMVLPYIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577879|ref|XP_002529812.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530689|gb|EEF32561.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/109 (69%), Positives = 94/109 (86%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNMRI GRIAVCGMISQYNLEK EGVHNLM +V KR+ ++GF+  D+++QY KF
Sbjct: 244 MLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMTIVYKRVLIKGFVVTDYFNQYSKF 303

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           L+ V+  I+EGK+ YVEDIAEGLE AP+ALVG+F+G+NVGKQ+V +ARE
Sbjct: 304 LDFVLPLIREGKITYVEDIAEGLESAPAALVGLFSGRNVGKQVVAVARE 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 93/109 (85%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV  NMR+  RIAVCGMISQYNLE+ EGVHNL  ++ KR+RMEGF+  D+YH YPKF
Sbjct: 239 MLDAVLANMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKF 298

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE+++  IK GK+ YVED+AEGLE AP+AL+G+F+G+NVGKQ+VV+ARE
Sbjct: 299 LEMILPCIKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVVVARE 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 96/109 (88%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NM++ GRIAVCGMISQYNLE++EGVHNL  ++ KRIRMEGFL  D+YH YPK+
Sbjct: 235 MLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKY 294

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE+V+  IK GK+VYVED+A GLE AP+ALVG+F+G+N+GKQ+V+++RE
Sbjct: 295 LEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	1.0	0.317	0.724	9.9e-39
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	1.0	0.315	0.678	4.9e-37
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	1.0	0.315	0.688	3.5e-36
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	1.0	0.318	0.633	7.2e-36
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	1.0	0.311	0.633	1.3e-34
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	1.0	0.310	0.642	2.2e-34
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	1.0	0.308	0.633	4.6e-34
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.981	0.309	0.635	2.3e-32
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	1.0	0.308	0.605	2.3e-32
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.990	0.305	0.601	2e-31

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 79/109 (72%), Positives = 92/109 (84%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +YPKF
Sbjct:   235 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKF 294

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             LELV+  IKEGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VVIARE
Sbjct:   295 LELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 74/109 (67%), Positives = 91/109 (83%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV +NM + GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF+  DFY +Y KF
Sbjct:   237 MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKF 296

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             LE V+  I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+ARE
Sbjct:   297 LEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 75/109 (68%), Positives = 88/109 (80%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV LNM   GRIAVCGMISQYNLE  EGVHNL  ++ KRIR++GF   DFY +Y KF
Sbjct:   237 MLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKF 296

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             L+ V+  IKEGK+ YVED+A+GLEK P ALVG+F G+NVGKQ+VVIARE
Sbjct:   297 LDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 69/109 (63%), Positives = 94/109 (86%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             ML+AV  NMR+ GRIAVCGM+SQY+L++ EGVHNL++++ K+IRM+GF+  D+YH YPKF
Sbjct:   234 MLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKF 293

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             LE+V+  IKEGK+ YVEDI+EGLE APSAL+G++ G+NVG Q+V ++RE
Sbjct:   294 LEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 69/109 (63%), Positives = 89/109 (81%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV LNM++ GRIAVCGMISQYNLE  EGVHNL  V+ KRIR++GF+  D++ ++ KF
Sbjct:   242 MLDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKF 301

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             L+ V+  I+EGK+ YVED+ EGLE  PSAL+G+F G+NVGKQL+ +ARE
Sbjct:   302 LDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 70/109 (64%), Positives = 88/109 (80%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV +NM++ GR+AVCGMISQYNL   EGVHNL  ++ KRI+++GF   DFY +YPKF
Sbjct:   243 MLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKF 302

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             L+ V+  I+EGK+ YVEDIAEG E  PSAL+G+F G+NVGKQL V+ARE
Sbjct:   303 LDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 69/109 (63%), Positives = 88/109 (80%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV  NMR  GRIA CGMISQYNL++ EGVHNL  +V KRIR++GF A +F+ +Y KF
Sbjct:   245 MLDAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKF 304

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             L+ ++  ++EGK+ YVEDIA+GLE  PSAL+G+F G+NVGKQLV +ARE
Sbjct:   305 LDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 68/107 (63%), Positives = 86/107 (80%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV LNMR  GRIA CGMISQYNL+  EG++ L  +  KRIR+EGF   D++H+Y +F
Sbjct:   238 MLDAVILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEF 297

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA 107
             LE V+  IKEGK+ YVED+A+GLE AP+ALVG+F G+NVGKQLVV++
Sbjct:   298 LEFVVPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/109 (60%), Positives = 86/109 (78%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             MLDAV  NMR  GRIA CGMISQYNL++ EG+HN   +V KRIR++ F A +F+ +Y KF
Sbjct:   245 MLDAVLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKF 304

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
             L+ ++  ++EGK+ YVEDIA+GLE  PSAL+G+F G+NVGKQLV +ARE
Sbjct:   305 LDFILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 65/108 (60%), Positives = 85/108 (78%)

Query:     1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
             ML+AV  NMR  GRIA CGMISQYNL+K E +HN   +V KRIR++GF A +F+ +Y KF
Sbjct:   245 MLEAVLENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKF 304

Query:    61 LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR 108
             L+ ++  ++EGKL YVEDI++GLE  PSAL+G+F G+NVGKQLV +AR
Sbjct:   305 LDFILPHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVAR 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7247	1.0	0.3177	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	109
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	9e-54
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	4e-49
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	3e-43
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-31
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-27
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	1e-13
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	5e-13
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-07

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  170 bits (433), Expect = 9e-54
 Identities = 68/106 (64%), Positives = 85/106 (80%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV LNM + GRIA CGMISQYNLE  EGV NL+ ++ KR++++GFL GD+ H+YP+F
Sbjct: 233 MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEF 292

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI 106
           LE +   IKEGKL YVEDIA+GLE AP A VG+FTG N+GKQ+V +
Sbjct: 293 LEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  158 bits (402), Expect = 4e-49
 Identities = 65/109 (59%), Positives = 89/109 (81%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDA  LNM+I GRIAVCGM+S  +L  S+G+HNL  ++ KRIRM+GFL  D+ H +P+F
Sbjct: 240 MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQF 299

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE V R  K+GK+VY+ED++EGLE AP+ALVG+F+G+NVGKQ++ +A+E
Sbjct: 300 LENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  143 bits (362), Expect = 3e-43
 Identities = 47/104 (45%), Positives = 68/104 (65%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           +LDA    +   GRIA+CG ISQYN  +  G  NL  ++ KR+ M+GF+  D+  ++P+ 
Sbjct: 226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEA 285

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           L  + + + EGKL Y ED+ EGLE AP A +G+FTG+N GK +V
Sbjct: 286 LAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  113 bits (284), Expect = 1e-31
 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)

Query: 2   LDAVRLNMRIRGRIAVCGMISQYN-LEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYP-K 59
           LDAV   + +  RI VCG ISQYN  E   G   L  ++ KR+R++GF+    Y Q   +
Sbjct: 232 LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPE 291

Query: 60  FLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA 107
            L  +   +KEGK+ Y E I +GLE AP A +G+ +G+N GK +V +A
Sbjct: 292 ALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  102 bits (256), Expect = 1e-27
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFL 61
             V  +M   GR+AVCG IS YN ++ +    +   ++ K+++MEGF+   +  ++P+ L
Sbjct: 225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL 284

Query: 62  ELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI 106
           + +++ IKEGKL Y E + EG E  P A +G+  G+N GK +V +
Sbjct: 285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 64.6 bits (157), Expect = 1e-13
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQ------VVGKRIRMEGFLAGDFYHQ 56
           + V   M+  GRIA+CG IS YN     G   L        V+ + +RMEGF+   +  +
Sbjct: 221 NTVIGQMKKFGRIAICGAISTYN---RTG--PLPPGPPPEIVIYQELRMEGFIVNRWQGE 275

Query: 57  Y-PKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
              K L+ +++ + EGK+ Y E + EG E  P+A +G+  G+N+GK +V
Sbjct: 276 VRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 62.8 bits (153), Expect = 5e-13
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEK------SEGVHNLMQVVGKR-IRMEGFLAGDFYH 55
           D V   M     I +CG ISQYN +        E       ++ +R I  E FL  ++  
Sbjct: 238 DTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATE---AILKERNITRERFLVLNYKD 294

Query: 56  QYPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI 106
           ++ + +  + + +KEGKL   E + EGLE A  A   +  G N+GKQ+V +
Sbjct: 295 KFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSE---GVHNL-MQVVGKRIRMEGFLAGDFYHQ 56
           M D    N+ ++GR+ V G IS Y             L  +++ K   + GF    +   
Sbjct: 219 MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKL 278

Query: 57  YPKFLELVMRAIKEGKLVYVEDIAE--GLEKAPSALVGIFTGQNVGKQLV 104
            P+ L+ +++  + GKLV   D     GLE    A+  +++G+N+GK +V
Sbjct: 279 IPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	109
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.88
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.85
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.76
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	99.68
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	99.65
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.57
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.56
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.56
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.54
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.53
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.53
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.52
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.52
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.5
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.49
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.49
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.47
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.46
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.46
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.44
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.44
PLN02827	378	Alcohol dehydrogenase-like	99.43
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.38
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.37
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.35
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.35
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.33
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.28
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.26
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.22
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.21
PLN02740	381	Alcohol dehydrogenase-like	99.2
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.2
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.2
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.19
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.17
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.16
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.14
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.14
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.14
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.13
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.11
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.11
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.1
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.09
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.07
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.05
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.05
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.04
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.03
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.02
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.02
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.01
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.01
PRK10083	339	putative oxidoreductase; Provisional	99.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	98.99
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	98.98
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	98.97
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	98.97
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	98.96
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	98.95
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	98.93
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	98.93
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	98.93
PTZ00354	334	alcohol dehydrogenase; Provisional	98.93
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	98.92
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	98.91
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	98.91
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	98.91
PLN02702	364	L-idonate 5-dehydrogenase	98.89
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	98.87
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	98.86
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	98.86
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	98.85
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	98.82
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	98.82
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	98.81
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	98.81
cd08252	336	AL_MDR Arginate lyase and other MDR family members	98.8
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	98.8
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	98.8
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	98.79
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	98.79
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	98.79
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	98.78
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	98.78
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	98.78
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	98.77
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	98.76
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	98.75
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	98.74
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	98.74
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	98.73
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	98.72
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	98.72
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	98.71
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	98.7
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	98.7
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	98.69
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	98.69
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	98.68
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	98.67
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	98.67
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	98.65
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	98.65
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	98.64
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	98.62
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	98.6
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.59
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	98.57
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	98.56
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	98.55
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	98.55
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	98.54
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	98.53
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	98.5
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	98.49
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	98.47
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	98.47
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	98.44
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	98.39
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	98.34
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	98.25
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	98.16
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	98.12
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.96
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	97.9
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	96.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.63
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	94.72
COG0275	314	Predicted S-adenosylmethionine-dependent methyltra	84.46
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	80.5
TIGR00006	305	S-adenosyl-methyltransferase MraW. Genetics paper	80.31

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.88  E-value=3.7e-22  Score=135.37  Aligned_cols=108  Identities=41%  Similarity=0.725  Sum_probs=95.6

Q ss_pred             CHHHHHHhhccCCeEEEEccccccCCCC-CccccchHHHhhcceeeeeeee-cccccchHHHHHHHHHHHHcCceeeeee
Q 033914            1 MLDAVRLNMRIRGRIAVCGMISQYNLEK-SEGVHNLMQVVGKRIRMEGFLA-GDFYHQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         1 ~~~~~l~~l~~~Griv~~G~~~~~~~~~-~~~~~~~~~~~~k~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ++++++..|+..|||++||.+|+||.+. +..+..+..++.|+++++||.+ .+|.+..+++.+++..|+++|+|++.++
T Consensus       231 v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~et  310 (340)
T COG2130         231 VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRET  310 (340)
T ss_pred             HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEee
Confidence            4789999999999999999999998653 3455667789999999999999 4444445599999999999999999999


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ++.+||.+|+||..|.+|+++||+|+++.+
T Consensus       311 i~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         311 IVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             ehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            999999999999999999999999999864

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.85  E-value=3e-21  Score=130.75  Aligned_cols=109  Identities=67%  Similarity=1.126  Sum_probs=101.1

Q ss_pred             CHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         1 ~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      ++++++..|+..|||++||++|+||.+.+....++..++.|+++++||.+.++.+.+++.++.+..|+++|+|++.+++.
T Consensus       235 ~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~  314 (343)
T KOG1196|consen  235 MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIA  314 (343)
T ss_pred             HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHH
Confidence            47899999999999999999999987666445577889999999999999999999999999999999999999999999


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      .+||.+|+||..|++|++.||.++.+++|
T Consensus       315 ~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  315 DGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             HHHhccHHHHHHHhccCcccceEEEeecC
Confidence            99999999999999999999999999875

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.76  E-value=9.3e-18  Score=117.58  Aligned_cols=108  Identities=59%  Similarity=1.046  Sum_probs=86.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++||+++||..++...+.+....++..++.|++++.|++.+.+....++.++++++++++|+|++.++.++
T Consensus       241 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~  320 (348)
T PLN03154        241 LDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSE  320 (348)
T ss_pred             HHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceeccc
Confidence            46789999999999999987653211010123456788899999999876554445667889999999999999888789


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      ||+++++||+.+++|+..||+||++++|
T Consensus       321 ~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        321 GLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             CHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            9999999999999999999999999765

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=99.68  E-value=4.6e-16  Score=108.14  Aligned_cols=97  Identities=19%  Similarity=0.185  Sum_probs=83.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++|+++|+++++|.....    +..+++...++.+++++.|+..++     +.+.++++++.++|+|+|.+..++
T Consensus       242 ~~~~l~~l~~~G~~v~vG~~~~~----~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~  312 (339)
T COG1064         242 LEPSLKALRRGGTLVLVGLPGGG----PIPLLPAFLLILKEISIVGSLVGT-----RADLEEALDFAAEGKIKPEILETI  312 (339)
T ss_pred             HHHHHHHHhcCCEEEEECCCCCc----ccCCCCHHHhhhcCeEEEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeE
Confidence            68899999999999999997411    122456778999999999999886     457899999999999999996568


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +|+++++||+.|++++..|+.|+.+.
T Consensus       313 ~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         313 PLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             CHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999999999999999999998764

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.65  E-value=5.3e-16  Score=103.74  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=86.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ++.++.+|+++|.+|.+|..++.     ..|+++..+-.|.+++.--++..|.   .++..+..+++.++.+|.|++.++
T Consensus       228 ~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~  302 (336)
T KOG1197|consen  228 FAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHID  302 (336)
T ss_pred             hHHHHHHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeee
Confidence            67889999999999999998884     2356677777777766554444454   345667899999999999999999


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      .+|||+++.+|+.+|+++++.||+++.+++|
T Consensus       303 ~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  303 HVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             eecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            9999999999999999999999999998764

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.57  E-value=2.2e-14  Score=100.09  Aligned_cols=103  Identities=16%  Similarity=0.081  Sum_probs=77.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      ++.++++++++|+++++|...+.   ....+.++..++.|++++.|++.+.+.....+.++++++++++|+++  +.++.
T Consensus       243 ~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~  319 (347)
T PRK10309        243 VELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAH  319 (347)
T ss_pred             HHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEE
Confidence            56789999999999999976531   11111233467889999999876422111135688899999999985  44666


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +++|+|+++||+.+++++..||+|++++
T Consensus       320 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        320 RGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             EeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            6899999999999999988999999864

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.56  E-value=4e-14  Score=100.26  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=78.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|...+     + .++++..++.+++++.|++.+.     .+.+.++++++++|++++.+. ++
T Consensus       256 ~~~~~~~l~~~G~iv~vG~~~~-----~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~  323 (375)
T PLN02178        256 LLPLFSLLKVSGKLVALGLPEK-----P-LDLPIFPLVLGRKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDIE-LI  323 (375)
T ss_pred             HHHHHHhhcCCCEEEEEccCCC-----C-CccCHHHHHhCCeEEEEeCccC-----HHHHHHHHHHHHhCCCcccEE-EE
Confidence            4678999999999999997543     1 2356677888999999987643     346788999999999998874 58


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ||+|+++||+.+++++..||+|+.+.
T Consensus       324 ~l~~~~~A~~~~~~~~~~gkvvi~~~  349 (375)
T PLN02178        324 KMSDINSAMDRLAKSDVRYRFVIDVA  349 (375)
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEec
Confidence            99999999999999998999999873

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.56  E-value=4.6e-14  Score=99.19  Aligned_cols=95  Identities=16%  Similarity=0.131  Sum_probs=79.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..++.      .+++...++.+++++.|++.+.     ...+.++++++++|++++.+. ++
T Consensus       258 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i~-~~  325 (357)
T PLN02514        258 LEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLGRKVITGSFIGS-----MKETEEMLEFCKEKGLTSMIE-VV  325 (357)
T ss_pred             HHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhCCcEEEEEecCC-----HHHHHHHHHHHHhCCCcCcEE-EE
Confidence            46789999999999999986531      1355667889999999998654     346788999999999998775 68


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+|+.+||+.+++++..||+|+.++.
T Consensus       326 ~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        326 KMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             cHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            999999999999999888999998854

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=6.7e-14  Score=96.13  Aligned_cols=95  Identities=13%  Similarity=0.181  Sum_probs=83.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.+++++|++|++|++|.+..+      ..++...++.+.++|.|+.+++     +.+.+++++++++|.|++.+.. .
T Consensus       262 ~~~~~~~lk~~Gt~V~vg~p~~~------~~~~~~~lil~~~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE~-v  329 (360)
T KOG0023|consen  262 LEPLLGLLKVNGTLVLVGLPEKP------LKLDTFPLILGRKSIKGSIVGS-----RKETQEALDFVARGLIKSPIEL-V  329 (360)
T ss_pred             hHHHHHHhhcCCEEEEEeCcCCc------ccccchhhhcccEEEEeecccc-----HHHHHHHHHHHHcCCCcCceEE-E
Confidence            67899999999999999997752      2456677899999999999987     4578899999999999999876 4


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +++++++||++|+.++..+|.||+++.
T Consensus       330 ~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  330 KLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             ehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            999999999999999999999998865

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.53  E-value=8.4e-14  Score=98.05  Aligned_cols=94  Identities=11%  Similarity=0.075  Sum_probs=77.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|...+.      ..+++..++.++.++.|++.+.     .+.+.++++++++|++++.+. +|
T Consensus       261 ~~~~~~~l~~~G~iv~vG~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~-~~  328 (360)
T PLN02586        261 LGPLLGLLKVNGKLITLGLPEKP------LELPIFPLVLGRKLVGGSDIGG-----IKETQEMLDFCAKHNITADIE-LI  328 (360)
T ss_pred             HHHHHHHhcCCcEEEEeCCCCCC------CccCHHHHHhCCeEEEEcCcCC-----HHHHHHHHHHHHhCCCCCcEE-EE
Confidence            46789999999999999975431      1355667788999999987543     346888999999999998774 68


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ||+|+++||+.+++++..||+|+.+.
T Consensus       329 ~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        329 RMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             eHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            99999999999999998999999873

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.53  E-value=1.2e-13  Score=96.17  Aligned_cols=92  Identities=12%  Similarity=0.047  Sum_probs=74.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++++|...+.   .  .++++..++.+++++.|++...     ++.+.++++++++|++++. +.+|
T Consensus       237 ~~~~~~~l~~~G~~v~~G~~~~~---~--~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~i-~~~~  305 (329)
T TIGR02822       237 VPPALEALDRGGVLAVAGIHLTD---T--PPLNYQRHLFYERQIRSVTSNT-----RADAREFLELAAQHGVRVT-THTY  305 (329)
T ss_pred             HHHHHHhhCCCcEEEEEeccCcc---C--CCCCHHHHhhCCcEEEEeecCC-----HHHHHHHHHHHHhCCCeeE-EEEE
Confidence            57889999999999999974331   1  1355667788999999987532     3457788999999999864 5568


Q ss_pred             ccchHHHHHHHhhcCCCcceEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      ||||+++||+.+++++..||+|+
T Consensus       306 ~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       306 PLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             eHHHHHHHHHHHHcCCCceEEEe
Confidence            99999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.52  E-value=1.4e-14  Score=88.05  Aligned_cols=90  Identities=24%  Similarity=0.151  Sum_probs=57.2

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc--cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY--HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +.+.++| ++|+++.+|. .-          .......+...+.+.+.....  +...+.++++.+++++|+|+|.+..+
T Consensus        36 ~~~~~~l-~~G~~v~i~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~  103 (127)
T PF13602_consen   36 DASRKLL-PGGRVVSIGG-DL----------PSFARRLKGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRV  103 (127)
T ss_dssp             GGCCCTE-EEEEEEEE-S-HH----------HHHHHHHHCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEE
T ss_pred             HHHHHHC-CCCEEEEECC-cc----------cchhhhhcccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccE
Confidence            3444566 9999999984 10          011111223333333332111  11345699999999999999999989


Q ss_pred             cccchHHHHHHHhhcCCCcceEEE
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      |||+++++||+.++++++.||+||
T Consensus       104 f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen  104 FPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             EEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ECHHHHHHHHHHHHhCCCCCeEeC
Confidence            999999999999999999999997

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.52  E-value=2.3e-13  Score=94.76  Aligned_cols=105  Identities=64%  Similarity=1.083  Sum_probs=81.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..++..........+...++.+++++.|++...+.+...+.+.++++++++|++++.+..++
T Consensus       234 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  313 (338)
T cd08295         234 LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIAD  313 (338)
T ss_pred             HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeeccc
Confidence            46789999999999999976543110000113345678899999998766554334566888999999999998877779


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +|+++++||+.+++++..||+|+++
T Consensus       314 ~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         314 GLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             CHHHHHHHHHHHhcCCCCceEEEEC
Confidence            9999999999999999999999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.50  E-value=1.7e-13  Score=94.80  Aligned_cols=98  Identities=17%  Similarity=0.197  Sum_probs=79.1

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc-chHHHHHHHHHHHHcCceeeeeeeec
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH-QYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ..++++++++||++.+|..++.+    ...++...++.+++++.|++...+.. ..++.+.+++++++ |++++.++.+|
T Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~  300 (324)
T cd08291         226 GQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRY  300 (324)
T ss_pred             HHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEE
Confidence            45788999999999999866531    11244567788999999998765432 23567889999998 99999888889


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +|||+++||+.+++++..||+++.
T Consensus       301 ~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         301 PLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             cHHHHHHHHHHHHhCCCCCeEEeC
Confidence            999999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.49  E-value=2.3e-13  Score=95.07  Aligned_cols=93  Identities=14%  Similarity=0.116  Sum_probs=76.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      ++.++++++++|+++.+|.....      .++++..++.|++++.|++..      .+.+.++++++++|++++  .++.
T Consensus       249 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~  316 (343)
T PRK09880        249 INTCLEVTRAKGVMVQVGMGGAP------PEFPMMTLIVKEISLKGSFRF------TEEFNTAVSWLANGVINPLPLLSA  316 (343)
T ss_pred             HHHHHHHhhcCCEEEEEccCCCC------CccCHHHHHhCCcEEEEEeec------cccHHHHHHHHHcCCCCchhheEE
Confidence            56789999999999999974321      245667788999999998742      245788999999999986  4556


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++|+|+++||+.+++++..||+++.+
T Consensus       317 ~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        317 EYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             EEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            789999999999999988889999864

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.49  E-value=1.6e-13  Score=94.72  Aligned_cols=93  Identities=17%  Similarity=0.176  Sum_probs=74.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +++++++++++|+++++|...+.      ..+++..++.|++++.|+..+.     ++.+.++++|+++|++++.  ++.
T Consensus       214 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~it~  282 (308)
T TIGR01202       214 IDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGALSLDGLITH  282 (308)
T ss_pred             HHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCCCChhhccce
Confidence            57889999999999999985431      2345566788999999875321     4568899999999999874  555


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ++||+|+++||+.+.+++..||++++
T Consensus       283 ~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       283 QRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             eecHHHHHHHHHHHhcCcCceEEEeC
Confidence            68999999999999887778999874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.47  E-value=5.2e-13  Score=93.21  Aligned_cols=100  Identities=24%  Similarity=0.311  Sum_probs=79.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +..++++|+++|+++.||..++ .   +..+++...++.+.+++.|++.... .+...+.++++.+++++|++++.++.+
T Consensus       224 ~~~~l~~l~~~G~lv~ig~~~g-~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~  299 (326)
T COG0604         224 FAASLAALAPGGRLVSIGALSG-G---PPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRV  299 (326)
T ss_pred             HHHHHHHhccCCEEEEEecCCC-C---CccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccE
Confidence            5678999999999999999884 1   1224556778889999999987532 134557888999999999999999999


Q ss_pred             cccchHH--HHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAP--SALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~--~A~~~l~~g~~~GKvvv~~  106 (109)
                      |||+|.+  .|+..++ +++.||+|+++
T Consensus       300 ~~l~e~~~a~a~~~~~-~~~~GKvvl~~  326 (326)
T COG0604         300 YPLAEAPAAAAHLLLE-RRTTGKVVLKV  326 (326)
T ss_pred             echhhhHHHHHHHHcc-cCCcceEEEeC
Confidence            9999954  4555555 68899999975

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.46  E-value=4.8e-13  Score=94.40  Aligned_cols=97  Identities=12%  Similarity=0.113  Sum_probs=76.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|..++..    ...++...++.|++++.|++.+.+.  ..+.+.++++++++|++++.  ++.
T Consensus       273 ~~~~~~~l~~~G~iv~~G~~~~~~----~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~  346 (371)
T cd08281         273 LETAYEITRRGGTTVTAGLPDPEA----RLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTH  346 (371)
T ss_pred             HHHHHHHHhcCCEEEEEccCCCCc----eeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheee
Confidence            467899999999999999865321    1235666789999999999876542  13467888999999999864  456


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++|+|+++||+.+++++..||+|+
T Consensus       347 ~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         347 RLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             eecHHHHHHHHHHHhCCCceeeeeC
Confidence            6899999999999999998888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.46  E-value=6.3e-13  Score=91.73  Aligned_cols=105  Identities=37%  Similarity=0.665  Sum_probs=80.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCc-cccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSE-GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~-~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      ++.++++++++|+++.+|..+.++..... .......++.+++++.|++...+....++.++++++++++|++++....+
T Consensus       224 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~  303 (329)
T cd08294         224 SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVT  303 (329)
T ss_pred             HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccc
Confidence            45788999999999999976543211110 01223457889999999876544334456788999999999999877677


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++|+++++||+.+++++..||+|+++
T Consensus       304 ~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         304 EGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             cCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            89999999999999999999999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.44  E-value=1.1e-12  Score=91.77  Aligned_cols=94  Identities=11%  Similarity=0.079  Sum_probs=74.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee-eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV-EDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~-~~~~   80 (109)
                      ++.++++++++|+++++|..++.      .++++..++.++.++.|++...     ++.+.++++++++|++++. ...+
T Consensus       255 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~  323 (349)
T TIGR03201       255 QESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVER  323 (349)
T ss_pred             HHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEE
Confidence            35688999999999999986531      1345567788889999987532     3467889999999999764 2235


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +||+|+++||+.+++++..||+++++
T Consensus       324 ~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       324 RPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             ecHHHHHHHHHHHHcCCccceEEecC
Confidence            89999999999999999999999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.44  E-value=1.3e-12  Score=90.46  Aligned_cols=104  Identities=35%  Similarity=0.563  Sum_probs=78.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccc-cchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGV-HNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~-~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      ++.++++++++||++.+|..++......... .....+..+++++.|++...+. ....+.+.++++++++|++++.+..
T Consensus       220 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  299 (325)
T TIGR02825       220 SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYV  299 (325)
T ss_pred             HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceec
Confidence            4678999999999999998654311001111 1234567789999998764432 2234578899999999999998878


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++|+++++||+.+++++..||+|++
T Consensus       300 ~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       300 IEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             cccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            89999999999999999999999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN02827 Alcohol dehydrogenase-like

Probab=99.43  E-value=1.5e-12  Score=92.23  Aligned_cols=97  Identities=8%  Similarity=0.016  Sum_probs=77.0

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--ee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VE   77 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~   77 (109)
                      +..++++++++ |+++++|...+.    +  .++. ..++.|++++.|++.+.+.  .+..+.++++++++|+|++  .+
T Consensus       277 ~~~~l~~l~~g~G~iv~~G~~~~~----~--~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i  348 (378)
T PLN02827        277 ATTALQSCSDGWGLTVTLGVPKAK----P--EVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFI  348 (378)
T ss_pred             HHHHHHhhccCCCEEEEECCcCCC----c--cccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHhe
Confidence            56789999999 999999985431    1  2222 3578899999999876542  2346788999999999998  56


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +.++||||+++||+.+++++. +|+||.++
T Consensus       349 ~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        349 THNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             EEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            667899999999999999876 79999875

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.38  E-value=4.5e-12  Score=90.69  Aligned_cols=97  Identities=16%  Similarity=0.156  Sum_probs=75.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|++++++.....+   ...++++..++.+++++.|++.+.     +..+.++++++++|++++.  ++.
T Consensus       271 ~~~a~~~l~~~G~~v~~~g~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~  342 (410)
T cd08238         271 VEEADTLLAPDGCLNFFAGPVDKN---FSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTH  342 (410)
T ss_pred             HHHHHHHhccCCeEEEEEccCCCC---ccccccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEE
Confidence            567899999999988875422110   012456677889999999987532     3468889999999999984  566


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ++||+|+++||+.+. ++..||+|+.+.
T Consensus       343 ~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         343 IGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             EecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            789999999999999 777899999873

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.37  E-value=3.3e-12  Score=89.31  Aligned_cols=94  Identities=15%  Similarity=0.101  Sum_probs=70.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC-----ceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG-----KLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G-----~l~~~   76 (109)
                      ++.++++++++|+++++|...+.      .++++..++.|++++.|++.+.     ++.+.++++++++|     .+++.
T Consensus       239 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~  307 (341)
T cd08237         239 INQIIDYIRPQGTIGLMGVSEYP------VPINTRMVLEKGLTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKL  307 (341)
T ss_pred             HHHHHHhCcCCcEEEEEeecCCC------cccCHHHHhhCceEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHH
Confidence            57889999999999999974321      2355667889999999986532     34678899999999     46666


Q ss_pred             eeeecccc---hHHHHHHHhhcCCCcceEEEEee
Q 033914           77 EDIAEGLE---KAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        77 ~~~~~~l~---~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ++.+++|+   ++++||+.+.++ ..||+|+.++
T Consensus       308 i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         308 VGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             hccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            66678875   566666666555 6899999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.35  E-value=1.2e-11  Score=85.95  Aligned_cols=90  Identities=20%  Similarity=0.175  Sum_probs=71.9

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccc-hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHN-LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~-~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      +.++++++++|+++.+|..++.       .++ ...++.|++++.|++.+.     .+.+.++++++++|++++  .++.
T Consensus       246 ~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~  313 (339)
T cd08239         246 RLALEAVRPWGRLVLVGEGGEL-------TIEVSNDLIRKQRTLIGSWYFS-----VPDMEECAEFLARHKLEVDRLVTH  313 (339)
T ss_pred             HHHHHHhhcCCEEEEEcCCCCc-------ccCcHHHHHhCCCEEEEEecCC-----HHHHHHHHHHHHcCCCChhHeEEE
Confidence            5688999999999999975432       122 245788999999987643     346788999999999875  4566


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++|+|+++||+.+++++ .||+|++
T Consensus       314 ~~~l~~~~~a~~~~~~~~-~gKvvi~  338 (339)
T cd08239         314 RFGLDQAPEAYALFAQGE-SGKVVFV  338 (339)
T ss_pred             EecHHHHHHHHHHHHcCC-ceEEEEe
Confidence            689999999999998876 7999986

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.35  E-value=1.1e-11  Score=87.01  Aligned_cols=97  Identities=14%  Similarity=0.195  Sum_probs=74.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++++|...+.    ....++...++.+++++.|++.+.+.  ..+.++++++++++|++++.  ++.
T Consensus       259 ~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~  332 (358)
T TIGR03451       259 YKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTE  332 (358)
T ss_pred             HHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEE
Confidence            46788999999999999985431    01234556788899999998754321  13567889999999999864  566


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +|||+|+.+||+.+++++.. |+++.
T Consensus       333 ~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       333 RIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             EecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            78999999999999988765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.33  E-value=2.6e-11  Score=84.43  Aligned_cols=105  Identities=31%  Similarity=0.459  Sum_probs=72.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCc-cccc--hHHH-hhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSE-GVHN--LMQV-VGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~-~~~~--~~~~-~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++|+++.+|..++++.+.+. ...+  ...+ ..+.++..++....+....++.++++.+++++|++++..
T Consensus       237 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  316 (345)
T cd08293         237 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE  316 (345)
T ss_pred             HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee
Confidence            46788999999999999975543211110 0111  1112 234555555543333333456788899999999999887


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..+++|+++.+||+.+++++..||+|+++
T Consensus       317 ~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         317 TVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             EEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            77789999999999999999899999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.28  E-value=2.8e-11  Score=84.61  Aligned_cols=92  Identities=20%  Similarity=0.151  Sum_probs=73.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      ++.++++++++|+++.+|..+..      .++++..++.|++++.|++.+.     .+.+.++++++++|+|++  .++.
T Consensus       255 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~  323 (351)
T cd08233         255 LDTAIDALRPRGTAVNVAIWEKP------ISFNPNDLVLKEKTLTGSICYT-----REDFEEVIDLLASGKIDAEPLITS  323 (351)
T ss_pred             HHHHHHhccCCCEEEEEccCCCC------CccCHHHHHhhCcEEEEEeccC-----cchHHHHHHHHHcCCCChHHheEE
Confidence            46788999999999999986521      2356667889999999987532     246788999999999964  3566


Q ss_pred             ecccchH-HHHHHHhhcCCCc-ceEEE
Q 033914           80 AEGLEKA-PSALVGIFTGQNV-GKQLV  104 (109)
Q Consensus        80 ~~~l~~~-~~A~~~l~~g~~~-GKvvv  104 (109)
                      +++|+|+ ++||+.+.+++.. ||+||
T Consensus       324 ~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         324 RIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             EecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            7899997 6899999999874 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.26  E-value=2.9e-11  Score=84.81  Aligned_cols=93  Identities=14%  Similarity=0.051  Sum_probs=70.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccc----hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc-----
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHN----LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK-----   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~----~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~-----   72 (109)
                      ++.++++++++|+++++|..++..   . .+++    ...++.|++++.|++.+.     ++.+.++++++.+++     
T Consensus       252 ~~~~~~~l~~~G~~v~~G~~~~~~---~-~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~  322 (355)
T cd08230         252 AFEALPALAPNGVVILFGVPGGGR---E-FEVDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPG  322 (355)
T ss_pred             HHHHHHHccCCcEEEEEecCCCCC---c-cccChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhccccccc
Confidence            567899999999999999866421   1 1222    346788999999987543     235677788888776     


Q ss_pred             -eeeeeeeecccchHHHHHHHhhcCCCcceEEEE
Q 033914           73 -LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        73 -l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                       +++.++.+++|+|+++||+.++++.  +|+||+
T Consensus       323 ~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~  354 (355)
T cd08230         323 VLERLITRRVPLEEFAEALTEKPDGE--IKVVIE  354 (355)
T ss_pred             chHHheeeeecHHHHHHHHHhcccCC--eEEEee
Confidence             5566777899999999999987654  699986

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.22  E-value=1.2e-10  Score=80.98  Aligned_cols=92  Identities=16%  Similarity=0.167  Sum_probs=74.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..+..      .+++...++.+++++.|+..+.     ...+.+++++++++++++.+. ++
T Consensus       242 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~v~-~~  309 (333)
T cd08296         242 ISALVGGLAPRGKLLILGAAGEP------VAVSPLQLIMGRKSIHGWPSGT-----ALDSEDTLKFSALHGVRPMVE-TF  309 (333)
T ss_pred             HHHHHHHcccCCEEEEEecCCCC------CCcCHHHHhhcccEEEEeCcCC-----HHHHHHHHHHHHhCCCCceEE-EE
Confidence            46678999999999999985521      2345567789999999987432     346778888999999987754 68


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++|+.+||+.+++++..||+|++
T Consensus       310 ~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         310 PLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             EHHHHHHHHHHHHCCCCceeEEeC
Confidence            999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.21  E-value=1.1e-10  Score=80.62  Aligned_cols=96  Identities=18%  Similarity=0.231  Sum_probs=76.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee-
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA-   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~-   80 (109)
                      +++++.+++.+|+++++|.-+.      ..++++.....|++++.|++-  |..   .++..+++++++|++++...+| 
T Consensus       256 ~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~kE~~~~g~fr--y~~---~~y~~ai~li~sGki~~k~lIT~  324 (354)
T KOG0024|consen  256 IRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVALKEVDLRGSFR--YCN---GDYPTAIELVSSGKIDVKPLITH  324 (354)
T ss_pred             HHHHHHHhccCCEEEEeccCCC------ccccChhhhhhheeeeeeeee--ecc---ccHHHHHHHHHcCCcCchhheec
Confidence            5789999999999999997443      235778889999999999984  432   2567777899999999775544 


Q ss_pred             -cccchHHHHHHHhhcCCC-cceEEEEeec
Q 033914           81 -EGLEKAPSALVGIFTGQN-VGKQLVVIAR  108 (109)
Q Consensus        81 -~~l~~~~~A~~~l~~g~~-~GKvvv~~~~  108 (109)
                       |+|+++.+||+.+..++. .-|+++..++
T Consensus       325 r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  325 RYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             ccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence             699999999999988775 4588887653

>PLN02740 Alcohol dehydrogenase-like

Probab=99.20  E-value=1.9e-10  Score=81.60  Aligned_cols=97  Identities=16%  Similarity=0.100  Sum_probs=72.1

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++++++ |+++++|..++.    ...+++... +.+++++.|++.+.+..  ...+.++++++.+|++++  .++
T Consensus       282 ~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it  354 (381)
T PLN02740        282 LREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPME-LFDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFIT  354 (381)
T ss_pred             HHHHHHhhhcCCCEEEEEccCCCC----ceecccHHH-HhcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHhee
Confidence            56788999997 999999986531    111233322 34789999998765432  346788999999999876  356


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .+|+|+|+++||+.+++++. .|++|++
T Consensus       355 ~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        355 HELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             EEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            67899999999999998875 6999863

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.20  E-value=2.8e-10  Score=77.71  Aligned_cols=99  Identities=17%  Similarity=0.128  Sum_probs=77.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhh--cceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVG--KRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~--k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      ++.++++++++|+++.+|..+..   .  .++++..+..  ++.++.++.... .....+.+..+++++++|++++.+..
T Consensus       205 ~~~~~~~l~~~G~~v~~g~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~  278 (305)
T cd08270         205 LARALELLAPGGTVVSVGSSSGE---P--AVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGW  278 (305)
T ss_pred             HHHHHHHhcCCCEEEEEeccCCC---c--ccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceecc
Confidence            46789999999999999975421   1  1344445554  699999988653 22345678889999999999987767


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++++||+.+.++...||+|+.+
T Consensus       279 ~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         279 RGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             EEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            789999999999999999999999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.20  E-value=2.1e-10  Score=80.84  Aligned_cols=95  Identities=11%  Similarity=0.019  Sum_probs=71.1

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--ee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--ED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~   78 (109)
                      ++.++++++++ |+++++|..+...    ..+++...+ .+++++.|++.+.+.  .+..+.++++++.+|++++.  +.
T Consensus       271 ~~~~~~~~~~~~g~~v~~g~~~~~~----~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~  343 (369)
T cd08301         271 MISAFECVHDGWGVTVLLGVPHKDA----VFSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFIT  343 (369)
T ss_pred             HHHHHHHhhcCCCEEEEECcCCCCc----ccccCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHhee
Confidence            45678999996 9999999865321    112333333 478999999876542  23467889999999998764  55


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      .++||+|+++||+.+++++. .|+++
T Consensus       344 ~~~~l~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         344 HELPFSEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             eeecHHHHHHHHHHHHCCCc-eeEEe
Confidence            66899999999999999885 59886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.19  E-value=9.2e-11  Score=82.64  Aligned_cols=96  Identities=20%  Similarity=0.124  Sum_probs=75.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee-
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA-   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~-   80 (109)
                      +++++++++++|+++++|...+.    . .+++...++.|++++.|++....    +..+..+++++++|++++...++ 
T Consensus       252 ~~~ai~~~r~gG~v~~vGv~~~~----~-~~~~~~~~~~kel~l~gs~~~~~----~~~~~~~~~ll~~g~i~~~~lit~  322 (350)
T COG1063         252 LDQALEALRPGGTVVVVGVYGGE----D-IPLPAGLVVSKELTLRGSLRPSG----REDFERALDLLASGKIDPEKLITH  322 (350)
T ss_pred             HHHHHHHhcCCCEEEEEeccCCc----c-CccCHHHHHhcccEEEeccCCCC----cccHHHHHHHHHcCCCChhHceEe
Confidence            57899999999999999997652    1 03566789999999999954221    23577888899999999874433 


Q ss_pred             -cccchHHHHHHHhhcCCC-cceEEEEe
Q 033914           81 -EGLEKAPSALVGIFTGQN-VGKQLVVI  106 (109)
Q Consensus        81 -~~l~~~~~A~~~l~~g~~-~GKvvv~~  106 (109)
                       ++|+|+++||+.+.+++. ..|+++.+
T Consensus       323 ~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         323 RLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             eccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence             489999999999998654 56888763

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.17  E-value=3.1e-10  Score=79.05  Aligned_cols=92  Identities=14%  Similarity=0.045  Sum_probs=75.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|.....      ..+++..++.+++++.|++...     .+.++++++++++|++++.+ .++
T Consensus       246 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~  313 (337)
T cd05283         246 LDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVI  313 (337)
T ss_pred             HHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC-----HHHHHHHHHHHHhCCCccce-EEE
Confidence            56789999999999999975542      1345566778999999987643     45788899999999998765 457


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++++++||+.++++++.||+|++
T Consensus       314 ~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         314 PMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EHHHHHHHHHHHHcCCCcceEeeC
Confidence            999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.16  E-value=3.2e-10  Score=79.92  Aligned_cols=95  Identities=11%  Similarity=0.078  Sum_probs=70.5

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++++++ |+++.+|..++.+     .+++...++. ++++.|++.+.+.  .+..+.++++++++|+++.  .++
T Consensus       268 ~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~  339 (365)
T cd08277         268 MNEALESTKLGWGVSVVVGVPPGAE-----LSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELIT  339 (365)
T ss_pred             HHHHHHhcccCCCEEEEEcCCCccc-----cccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHhee
Confidence            45788899885 9999999865311     1233444553 8999999876653  2345788999999998764  466


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      .+++|+|+++||+.+++++ ..|+++.
T Consensus       340 ~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         340 HVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             eEEchhhHHHHHHHHHCCC-CceEeeC
Confidence            6789999999999999887 5798873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.14  E-value=1.1e-10  Score=81.13  Aligned_cols=96  Identities=15%  Similarity=0.100  Sum_probs=73.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee-
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA-   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~-   80 (109)
                      +++++++..++|+.+++|...-.    ...+.++.+++.. .+++|++.+.-..  +.++.++++|+.+|+|.....++ 
T Consensus       268 ~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~  340 (366)
T COG1062         268 MRQALEATHRGGTSVIIGVAGAG----QEISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTH  340 (366)
T ss_pred             HHHHHHHHhcCCeEEEEecCCCC----ceeecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhc
Confidence            67899999999999999985531    1223445556655 8999998875432  24677888899999999876544 


Q ss_pred             -cccchHHHHHHHhhcCCCcceEEEE
Q 033914           81 -EGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        81 -~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                       ++|||+++||++|++|+.. |-||.
T Consensus       341 ~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         341 TIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             cccHHHHHHHHHHHhCCcee-eEEec
Confidence             6999999999999999864 66654

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.14  E-value=4.8e-10  Score=79.14  Aligned_cols=96  Identities=14%  Similarity=0.097  Sum_probs=69.2

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--ee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--ED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~   78 (109)
                      +++++++++++ ||++.+|..++.   .. ...+...++ +..++.|++.+.+.  .++.+.++++++++|++++.  ++
T Consensus       270 ~~~a~~~l~~~~G~~v~~g~~~~~---~~-~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~  342 (368)
T cd08300         270 MRAALEACHKGWGTSVIIGVAAAG---QE-ISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFIT  342 (368)
T ss_pred             HHHHHHhhccCCCeEEEEccCCCC---Cc-cccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhcee
Confidence            46788999997 999999986421   01 122222333 34578888765543  24567889999999999864  56


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      .+++|||+++||+.+++++. .|++++
T Consensus       343 ~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         343 HTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             eeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            67899999999999998874 699874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.14  E-value=6.3e-10  Score=77.48  Aligned_cols=95  Identities=21%  Similarity=0.216  Sum_probs=77.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|...+.     ...+++..++.+++++.|+....     .+.+.++++++.+|++++.+..++
T Consensus       256 ~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~  325 (350)
T cd08274         256 FPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLYLKDLTLFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTF  325 (350)
T ss_pred             HHHHHHHhccCCEEEEecccCCc-----cccCCHHHhhhcceEEEEeecCC-----HHHHHHHHHHHHCCCccccccccc
Confidence            46788999999999999975431     12355667788999999987532     456888999999999988766778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++.+|++.+.++...||+|+.+
T Consensus       326 ~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         326 PLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             CHHHHHHHHHHHhcCCCceEEEEeC
Confidence            9999999999999988899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.13  E-value=4.4e-10  Score=77.57  Aligned_cols=103  Identities=46%  Similarity=0.802  Sum_probs=77.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..+...........+...++.+++++.|+....+.....+.+.++++++.+|.+++....++
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~  306 (329)
T cd05288         227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVE  306 (329)
T ss_pred             HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccc
Confidence            46788999999999999976543110000012345667899999998764443334567888999999999998766778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +|+++++|++.+.+++..||+++
T Consensus       307 ~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         307 GLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cHHHHHHHHHHHhcCCCccceeC
Confidence            99999999999999888899874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.11  E-value=6.3e-10  Score=76.60  Aligned_cols=99  Identities=15%  Similarity=0.172  Sum_probs=76.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc-----chHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH-----QYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      +..++++++++||++.+|...+.    . ..+++..++.+++++.++....+..     ...+.+.++++++.+|.+++.
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~  295 (324)
T cd08292         221 AGELLSLLGEGGTLVSFGSMSGE----P-MQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP  295 (324)
T ss_pred             HHHHHHhhcCCcEEEEEecCCCC----C-CcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence            35678999999999999975321    1 1344555678999999988654321     124568889999999999866


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEE
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +..+++++++.+||+.+.++...||++++
T Consensus       296 ~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         296 VEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            66678999999999999988889999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.11  E-value=1.1e-09  Score=77.74  Aligned_cols=95  Identities=15%  Similarity=0.199  Sum_probs=76.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|...+..     ..++...++.++.++.|++...     .+.+.++++++++|.+.+.+..++
T Consensus       298 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~  367 (393)
T cd08246         298 FPTSVFVCDRGGMVVICAGTTGYN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVF  367 (393)
T ss_pred             HHHHHHHhccCCEEEEEcccCCCC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEE
Confidence            467889999999999999755321     1345566788999999986543     346778899999999998766678


Q ss_pred             ccchHHHHHHHhhcC-CCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTG-QNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g-~~~GKvvv~~  106 (109)
                      +++++++||+.+.++ +..||+++.+
T Consensus       368 ~l~~~~~a~~~~~~~~~~~gkvvv~~  393 (393)
T cd08246         368 SLDETPDAHQLMHRNQHHVGNMAVLV  393 (393)
T ss_pred             eHHHHHHHHHHHHhCccccceEEEeC
Confidence            999999999999999 7899999753

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.10  E-value=4.9e-10  Score=80.04  Aligned_cols=100  Identities=15%  Similarity=0.092  Sum_probs=68.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccC-CCCC------ccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYN-LEKS------EGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~-~~~~------~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      +++++++++++|+++++|...... ....      ...+....++.+++++.|...  .   ..+...++++++++|+++
T Consensus       282 ~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~--~---~~~~~~~~~~~~~~g~i~  356 (393)
T TIGR02819       282 LNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT--P---VMKYNRNLMQAILHDRVQ  356 (393)
T ss_pred             HHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccC--C---hhhhHHHHHHHHHcCCCC
Confidence            678999999999999999863211 0000      011223345567777776321  1   112346789999999998


Q ss_pred             ee--ee-eecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           75 YV--ED-IAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        75 ~~--~~-~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +.  +. .++||+|+++||+.+.+++ .+|+++.+.
T Consensus       357 ~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       357 IAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             HHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence            64  33 4589999999999998875 599999763

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.09  E-value=8.2e-10  Score=77.50  Aligned_cols=95  Identities=17%  Similarity=0.120  Sum_probs=70.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC--ce--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG--KL--VYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G--~l--~~~~   77 (109)
                      ++.++++++++|+++.+|..+..    ....++...++.+++++.|++.++     ++.+.++++++.++  .+  .+.+
T Consensus       263 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i  333 (361)
T cd08231         263 VPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELV  333 (361)
T ss_pred             HHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhhe
Confidence            45788999999999999975421    111344456788999999987543     34567777788777  43  3455


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..+++|+|+++||+.++++. .+|+||++
T Consensus       334 ~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         334 THRYPLEDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             eeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence            66789999999999998887 48999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.07  E-value=2.5e-09  Score=74.10  Aligned_cols=96  Identities=21%  Similarity=0.248  Sum_probs=74.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +.+++++++++|+++.+|..+..    ...+.++...+.+++++.+++..     .++.+.++++++++|.+++.+..++
T Consensus       238 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~  308 (334)
T PRK13771        238 LEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-----TKRDVEEALKLVAEGKIKPVIGAEV  308 (334)
T ss_pred             HHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC-----CHHHHHHHHHHHHcCCCcceEeeeE
Confidence            45788999999999999975431    11012334456788999987532     2457888999999999987776778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++.+||+.+.++...||+++.+
T Consensus       309 ~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        309 SLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             cHHHHHHHHHHHHcCCCcceEEEec
Confidence            9999999999999988899999875

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.05  E-value=2.3e-09  Score=74.92  Aligned_cols=93  Identities=17%  Similarity=0.204  Sum_probs=74.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..++.      ...++..+..+++++.+++...     ++.+.++++++++|.+++....++
T Consensus       257 ~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~  325 (350)
T cd08240         257 ASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS-----LEELRELVALAKAGKLKPIPLTER  325 (350)
T ss_pred             HHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC-----HHHHHHHHHHHHcCCCccceeeEE
Confidence            46788999999999999976542      1233445566999999887543     356788899999999987766678


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++++.+||+.+.+++..||+++.
T Consensus       326 ~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         326 PLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             cHHHHHHHHHHHHcCCccceEEec
Confidence            999999999999999889999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.05  E-value=3.3e-09  Score=73.16  Aligned_cols=99  Identities=19%  Similarity=0.257  Sum_probs=74.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|..++.    + ...++..++.+++++.|+...... ....+.+.++.+++..|.+++.. .+
T Consensus       224 ~~~~~~~l~~~G~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  297 (323)
T TIGR02823       224 LANVLAQLKYGGAVAACGLAGGP----D-LPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESIT-RE  297 (323)
T ss_pred             HHHHHHHhCCCCEEEEEcccCCC----C-ccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCce-ee
Confidence            46788999999999999976431    1 123345566899999997653221 22334567788888899887654 36


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++++++++||+.+.+++..||+|+++
T Consensus       298 ~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       298 ITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             ecHHHHHHHHHHHhCCCccceEEEeC
Confidence            89999999999999999999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.04  E-value=2.7e-09  Score=74.06  Aligned_cols=94  Identities=20%  Similarity=0.226  Sum_probs=74.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++.+|+++.+|.....      ..++...+..++.++.|++.+.     ++.+.++++++++|.+++.+. ++
T Consensus       244 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~  311 (338)
T PRK09422        244 FNQAVDAVRAGGRVVAVGLPPES------MDLSIPRLVLDGIEVVGSLVGT-----RQDLEEAFQFGAEGKVVPKVQ-LR  311 (338)
T ss_pred             HHHHHHhccCCCEEEEEeeCCCC------ceecHHHHhhcCcEEEEecCCC-----HHHHHHHHHHHHhCCCCccEE-EE
Confidence            46789999999999999975431      1345566777899998876432     356788999999999987655 47


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +++++++||+.+.++...||+++...
T Consensus       312 ~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        312 PLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             cHHHHHHHHHHHHcCCccceEEEecC
Confidence            99999999999999999999998653

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.03  E-value=3.7e-09  Score=75.36  Aligned_cols=96  Identities=16%  Similarity=0.181  Sum_probs=76.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +..++++++++|+++.+|..++.+     ...+...++.++.++.|+....+     ..+++++++++++++++.+..++
T Consensus       293 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~  362 (398)
T TIGR01751       293 FPTSVFVCRRGGMVVICGGTTGYN-----HDYDNRYLWMRQKRIQGSHFANL-----REAWEANRLVAKGRIDPTLSKVY  362 (398)
T ss_pred             HHHHHHhhccCCEEEEEccccCCC-----CCcCHHHHhhcccEEEccccCcH-----HHHHHHHHHHHCCCcccceeeEE
Confidence            457889999999999999865431     13445667788888988765432     24678899999999998777778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +++++++||+.+.+++..||+|+++.
T Consensus       363 ~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       363 PLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             cHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            99999999999999999999999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.02  E-value=3.6e-09  Score=74.75  Aligned_cols=96  Identities=14%  Similarity=0.077  Sum_probs=67.6

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      +++++++++++ |+++.+|...+.   .. .+++...++ ++..+.|++.+...  .+..+.++++++++|++++  .++
T Consensus       269 ~~~~~~~~~~~~G~~v~~g~~~~~---~~-~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~it  341 (368)
T TIGR02818       269 MRAALECCHKGWGESIIIGVAGAG---QE-ISTRPFQLV-TGRVWRGSAFGGVK--GRTELPGIVEQYMKGEIALDDFVT  341 (368)
T ss_pred             HHHHHHHhhcCCCeEEEEeccCCC---Cc-ccccHHHHh-ccceEEEeeccCCC--cHHHHHHHHHHHHCCCCCchhhee
Confidence            46788999886 999999985421   01 122233333 34467887654321  2346888999999999875  356


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      .++||||+++||+.+++++. +|++++
T Consensus       342 ~~~~l~~~~~A~~~~~~~~~-~k~~v~  367 (368)
T TIGR02818       342 HTMPLEDINEAFDLMHEGKS-IRTVIH  367 (368)
T ss_pred             EEecHHHHHHHHHHHhCCCc-eeEEee
Confidence            67899999999999988764 799886

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.02  E-value=2.3e-09  Score=84.15  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=77.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHH----HHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRA----IKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~----~~~G~l~~~~   77 (109)
                      ++++++||+.+||+..+|-..=.+ +   .|.. +..+.|+.+++|+.+.+..+..-+.+.++..+    +++|.++|..
T Consensus      1638 LQASiRCLa~~GRFLEIGKfDLSq-N---spLG-MavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ 1712 (2376)
T KOG1202|consen 1638 LQASIRCLALHGRFLEIGKFDLSQ-N---SPLG-MAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLP 1712 (2376)
T ss_pred             HHHHHHHHHhcCeeeeecceeccc-C---Ccch-hhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccc
Confidence            678999999999999999643211 1   1232 35788999999999876654333445555544    5567788888


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ...|+=+++++||+.|.+|+++||||+++-.
T Consensus      1713 ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1713 TTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred             cccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence            8788999999999999999999999999843

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.01  E-value=4.6e-09  Score=72.23  Aligned_cols=99  Identities=19%  Similarity=0.135  Sum_probs=77.4

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +.++++++++|+++.+|.....    . ..++...++.+++++.++...... ....+.+.+++++++++.+++.+..++
T Consensus       225 ~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  299 (324)
T cd08244         225 RAALALLAPGGRFLTYGWASGE----W-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTF  299 (324)
T ss_pred             HHHHHHhccCcEEEEEecCCCC----C-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEE
Confidence            5678999999999999976542    1 134444567899999998764322 234567888899999999987766778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++|++.+.+++..||+++++
T Consensus       300 ~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         300 PLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             eHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.01  E-value=2.3e-09  Score=73.28  Aligned_cols=98  Identities=16%  Similarity=0.237  Sum_probs=77.4

Q ss_pred             HHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc------chHHHHHHHHHHHHcCceeeee
Q 033914            4 AVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH------QYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         4 ~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~------~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ...+.|.+||++|.||.+|..    | ...+...+++|+++++|||+..|..      ++-+.+.++.+|+++|+|+...
T Consensus       248 ~iar~L~~GgtmvTYGGMSkq----P-v~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~  322 (354)
T KOG0025|consen  248 EIARYLERGGTMVTYGGMSKQ----P-VTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN  322 (354)
T ss_pred             HHHHHHhcCceEEEecCccCC----C-cccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc
Confidence            456789999999999998874    2 2355677999999999999988853      2346678899999999999877


Q ss_pred             eeecccchHHHHHHHhhcC-CCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTG-QNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g-~~~GKvvv~~  106 (109)
                      ....+|++-..|++...+. ...||-++.+
T Consensus       323 ~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  323 CEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            6556999999999887654 3357877765

>PRK10083 putative oxidoreductase; Provisional

Probab=99.00  E-value=5e-09  Score=72.82  Aligned_cols=95  Identities=15%  Similarity=0.095  Sum_probs=71.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +..++++++++|+++.+|..+..      .+++...+..+++++.+....      .+.++++++++++|++++.  +..
T Consensus       242 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~  309 (339)
T PRK10083        242 LEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSRLN------ANKFPVVIDWLSKGLIDPEKLITH  309 (339)
T ss_pred             HHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEecC------hhhHHHHHHHHHcCCCChHHheee
Confidence            46788999999999999975431      123344455688888876531      3468889999999999974  566


Q ss_pred             ecccchHHHHHHHhhcCC-CcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTGQ-NVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~-~~GKvvv~~~~  108 (109)
                      +++++++++||+.++++. ..||+++.+++
T Consensus       310 ~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        310 TFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             eecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            789999999999998654 57999997653

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.00  E-value=4.5e-09  Score=72.28  Aligned_cols=99  Identities=16%  Similarity=0.224  Sum_probs=72.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++|+++.+|.....+     ...++..++.+++++.++...... ....+.++.+.+++..+... .+..+
T Consensus       226 ~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  299 (325)
T cd05280         226 LANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLE-IVVRE  299 (325)
T ss_pred             HHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCcc-ceeeE
Confidence            467899999999999999754321     123344556899999998764332 12335566777777777444 46667


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++++++++|++.+.+++..||+|+++
T Consensus       300 ~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         300 ISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             ecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            89999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=98.99  E-value=5.8e-09  Score=72.10  Aligned_cols=93  Identities=24%  Similarity=0.376  Sum_probs=75.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++|+++|+++.+|.....      ...+...++.++.++.|++...     ++.+.++++++++|.|++. ...+
T Consensus       246 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~~-~~~~  313 (338)
T cd08254         246 FEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSFGGT-----PEDLPEVLDLIAKGKLDPQ-VETR  313 (338)
T ss_pred             HHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEeccCC-----HHHHHHHHHHHHcCCCccc-ceeE
Confidence            45788999999999999975431      1244567788999999876432     4578889999999999876 4467


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++.+|++.+.+++..||+|+++
T Consensus       314 ~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         314 PLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             cHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999999999999999999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=98.98  E-value=8.2e-09  Score=71.79  Aligned_cols=94  Identities=17%  Similarity=0.138  Sum_probs=74.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..+..     ..+++...++.+++++.++..+.     .+.+.++++++++|.+++.+ ..+
T Consensus       248 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~  316 (341)
T cd08297         248 YEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT-----RQDLQEALEFAARGKVKPHI-QVV  316 (341)
T ss_pred             HHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC-----HHHHHHHHHHHHcCCCccee-EEE
Confidence            45678999999999999975431     12345566778999999876432     45788899999999998755 457


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++||+.+..+...||++++.
T Consensus       317 ~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         317 PLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             cHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999999999999999999863

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=98.97  E-value=5.3e-09  Score=72.12  Aligned_cols=100  Identities=16%  Similarity=0.239  Sum_probs=67.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      ++.++++++++|+++.+|..+..    + ...++..++.+++++.|+..... .....+.+..+.+.+..+.+...+..+
T Consensus       226 ~~~~~~~l~~~G~~i~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (326)
T cd08289         226 LAYLLSTLQYGGSVAVSGLTGGG----E-VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQE  300 (326)
T ss_pred             HHHHHHHhhcCCEEEEEeecCCC----C-CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceE
Confidence            46788999999999999986432    1 12334556789999999864221 112233444444444323233344666


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++++++.+||+.+.+++..||+|+++
T Consensus       301 ~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         301 ITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             eeHHHHHHHHHHHhcCcccceEEEeC
Confidence            89999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=98.97  E-value=7.4e-09  Score=71.91  Aligned_cols=92  Identities=23%  Similarity=0.175  Sum_probs=72.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..+..       .++...++.+++++.++....     .+.+.++++++++|.+++.+. ++
T Consensus       249 ~~~~~~~l~~~g~~i~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~-~~  315 (340)
T cd05284         249 LALAAKLLAKGGRYVIVGYGGHG-------RLPTSDLVPTEISVIGSLWGT-----RAELVEVVALAESGKVKVEIT-KF  315 (340)
T ss_pred             HHHHHHHhhcCCEEEEEcCCCCC-------ccCHHHhhhcceEEEEEeccc-----HHHHHHHHHHHHhCCCCcceE-EE
Confidence            45678999999999999975421       233344568999999986532     346788899999999987544 57


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++|++.+.+++..||+++.+
T Consensus       316 ~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         316 PLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             eHHHHHHHHHHHHcCCccceEEecC
Confidence            9999999999999999999999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=98.96  E-value=1.2e-08  Score=70.28  Aligned_cols=95  Identities=23%  Similarity=0.302  Sum_probs=75.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..+...     ...+....+.+++++.++....     ...+.++++++++|.+++.+..++
T Consensus       248 ~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~  317 (342)
T cd08266         248 WEKSLKSLARGGRLVTCGATTGYE-----APIDLRHVFWRQLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVF  317 (342)
T ss_pred             HHHHHHHhhcCCEEEEEecCCCCC-----CCcCHHHHhhcceEEEEEecCC-----HHHHHHHHHHHHcCCcccceeeeE
Confidence            466789999999999999765421     1234445678899999886532     346788899999999988776778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++|++.+.++...||+++++
T Consensus       318 ~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         318 PLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999888899999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.95  E-value=1.2e-08  Score=70.25  Aligned_cols=95  Identities=22%  Similarity=0.287  Sum_probs=76.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +..++++++++|+++.+|..+...     ...+...++.+++++.++..+.     .+.+.++.++++++.+.+....++
T Consensus       242 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~  311 (336)
T cd08276         242 LAQSIKAVAPGGVISLIGFLSGFE-----APVLLLPLLTKGATLRGIAVGS-----RAQFEAMNRAIEAHRIRPVIDRVF  311 (336)
T ss_pred             HHHHHHhhcCCCEEEEEccCCCCc-----cCcCHHHHhhcceEEEEEecCc-----HHHHHHHHHHHHcCCcccccCcEE
Confidence            456789999999999999866531     1234556788999999987643     346788889999999987666668


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++|++.+.++...||+++++
T Consensus       312 ~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         312 PFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             eHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999988899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=98.93  E-value=9.4e-09  Score=73.07  Aligned_cols=95  Identities=16%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|..+..   .  ...+...++.+++++.++...     ..+.+.++++++++|++++.  +..
T Consensus       289 ~~~~~~~l~~~G~iv~~g~~~~~---~--~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~  358 (386)
T cd08283         289 LREAIQAVRKGGTVSIIGVYGGT---V--NKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITH  358 (386)
T ss_pred             HHHHHHHhccCCEEEEEcCCCCC---c--CccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEE
Confidence            45688999999999999976542   1  124455678899999987531     24568889999999999874  445


Q ss_pred             ecccchHHHHHHHhhcCC-CcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQ-NVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~-~~GKvvv~~  106 (109)
                      +++++++.+||+.+.++. ..||+|+++
T Consensus       359 ~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         359 RLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             EecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            689999999999998876 468999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=98.93  E-value=7.6e-09  Score=72.37  Aligned_cols=97  Identities=12%  Similarity=0.055  Sum_probs=68.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch--HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee---e
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL--MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY---V   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~--~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~---~   76 (109)
                      +..++++++++|+++.+|..+...   . ..++.  .....+..++.+.+...    .++.+.++++++++|+|++   .
T Consensus       249 ~~~~~~~l~~~G~~v~~g~~~~~~---~-~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~  320 (351)
T cd08285         249 FEQALKVLKPGGTISNVNYYGEDD---Y-LPIPREEWGVGMGHKTINGGLCPG----GRLRMERLASLIEYGRVDPSKLL  320 (351)
T ss_pred             HHHHHHHhhcCCEEEEecccCCCc---e-eecChhhhhhhccccEEEEeecCC----ccccHHHHHHHHHcCCCChhhce
Confidence            467889999999999999765421   1 11221  12335667777654322    1356788899999999998   3


Q ss_pred             eeeecccchHHHHHHHhhcCCC-cceEEEEe
Q 033914           77 EDIAEGLEKAPSALVGIFTGQN-VGKQLVVI  106 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~-~GKvvv~~  106 (109)
                      +..+++|+++++|++.+++++. .+|++|++
T Consensus       321 ~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         321 THHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             eccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            3445899999999999999874 78999863

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=98.93  E-value=1.1e-08  Score=71.09  Aligned_cols=100  Identities=14%  Similarity=0.141  Sum_probs=73.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      +..++++|+++|+++.+|...+.   ......++..++.+++++.|++.........+.++++++++++|+++  +.+..
T Consensus       241 ~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  317 (343)
T cd08236         241 IEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITH  317 (343)
T ss_pred             HHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheee
Confidence            35678999999999999975431   11112344567789999999976433223356788899999999986  44556


Q ss_pred             ecccchHHHHHHHhhc-CCCcceEEE
Q 033914           80 AEGLEKAPSALVGIFT-GQNVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~-g~~~GKvvv  104 (109)
                      +++++++.++++.+.+ +...||+|+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         318 RLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             eecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            6899999999999998 667889874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=98.93  E-value=1.7e-08  Score=69.61  Aligned_cols=103  Identities=18%  Similarity=0.211  Sum_probs=77.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc-----chHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH-----QYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      +..++++++++|+++.+|...+.+    ...+++..++.+++++.|+....+..     ...+.++++++++++|.+++.
T Consensus       223 ~~~~~~~l~~~g~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  298 (334)
T PTZ00354        223 LSETAEVLAVDGKWIVYGFMGGAK----VEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI  298 (334)
T ss_pred             HHHHHHHhccCCeEEEEecCCCCc----ccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc
Confidence            456789999999999999755421    11155566777888999987544221     122456778899999999877


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +...+++++++++++.+.+++..||+|+.+.+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        299 VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             cccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            66668999999999999988888999997654

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=98.92  E-value=1.2e-08  Score=70.19  Aligned_cols=98  Identities=17%  Similarity=0.173  Sum_probs=75.9

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-----cchHHHHHHHHHHHHcCceeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ..++++++++|+++.+|..+..    + ..++...+..+++++.++....+.     ....+.+.++++++.+|.+.+..
T Consensus       221 ~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  295 (323)
T cd05282         221 TRLARSLRPGGTLVNYGLLSGE----P-VPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV  295 (323)
T ss_pred             HHHHHhhCCCCEEEEEccCCCC----C-CCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence            4567899999999999976542    1 123444555599999998865542     23346788899999999998876


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEE
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ..+++++++.+||+.+.+++..||+|++
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            6678999999999999998889999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.91  E-value=1e-08  Score=70.68  Aligned_cols=90  Identities=19%  Similarity=0.159  Sum_probs=69.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      ++.++++++++|+++.+|.....      ..++...++.++.++.|+..+.        ++++++++++|+|+  +.+..
T Consensus       228 ~~~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~  293 (319)
T cd08242         228 LELALRLVRPRGTVVLKSTYAGP------ASFDLTKAVVNEITLVGSRCGP--------FAPALRLLRKGLVDVDPLITA  293 (319)
T ss_pred             HHHHHHHhhcCCEEEEEcccCCC------CccCHHHheecceEEEEEeccc--------HHHHHHHHHcCCCChhhceEE
Confidence            45678899999999997764431      2345667788999999886432        66788899999994  45666


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++.+||+.++++. .+|+|+++
T Consensus       294 ~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         294 VYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             EEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            789999999999998776 58999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=98.91  E-value=1.5e-08  Score=71.35  Aligned_cols=96  Identities=19%  Similarity=0.150  Sum_probs=72.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|..+..    ....++...++.+++++.+++...    ..+.+.++++++++|.+++.  +..
T Consensus       270 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~  341 (367)
T cd08263         270 FKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTH  341 (367)
T ss_pred             HHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeE
Confidence            35678999999999999975431    111344555667899998864322    14578889999999999874  445


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      .++++++.+||+.+.++.+.||+||.
T Consensus       342 ~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         342 KYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             EecHHHHHHHHHHHhcCCccceeeeC
Confidence            57999999999999999989999973

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=98.91  E-value=1.4e-08  Score=70.55  Aligned_cols=99  Identities=23%  Similarity=0.259  Sum_probs=75.7

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-----cchHHHHHHHHHHHHcCceeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ..++++++++|+++.+|.....    + ..++...++.+++++.++....+.     ......+.++++++.+|.+++..
T Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  309 (341)
T cd08290         235 TELARLLSPGGTMVTYGGMSGQ----P-VTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP  309 (341)
T ss_pred             HHHHHHhCCCCEEEEEeccCCC----C-cccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc
Confidence            4577899999999999965432    1 123444568899999998764322     12234688899999999998876


Q ss_pred             eeec---ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAE---GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~---~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..++   +++++.+|++.+.++...||+|+.+
T Consensus       310 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         310 VEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            6667   9999999999999998899999863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PLN02702 L-idonate 5-dehydrogenase

Probab=98.89  E-value=2.1e-08  Score=70.60  Aligned_cols=92  Identities=15%  Similarity=0.172  Sum_probs=70.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      ++.++++++++|+++.+|..++.      .+.+...+..+++++.|++..      ...++++++++++|++++  .+..
T Consensus       268 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~  335 (364)
T PLN02702        268 MSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVGVFRY------RNTWPLCLEFLRSGKIDVKPLITH  335 (364)
T ss_pred             HHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEEeccC------hHHHHHHHHHHHcCCCCchHheEE
Confidence            46788999999999999975431      123445678899999998742      235678899999999863  3444


Q ss_pred             ecc--cchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEG--LEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~--l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++  ++++.+||+.+.+++..||+|+.
T Consensus       336 ~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        336 RFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            544  48999999999988888999985

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=98.87  E-value=2.8e-08  Score=67.61  Aligned_cols=100  Identities=16%  Similarity=0.125  Sum_probs=74.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ++.++++++++|+++.+|..+..     ...++...+..+++++.++....+.   ..+.+.+.++++++.++.+++...
T Consensus       218 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (320)
T cd05286         218 FEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG  292 (320)
T ss_pred             HHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc
Confidence            35678999999999999975432     1123344444788888876543332   234456778899999999987766


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .+++++++.+|++.+.++...||++++|
T Consensus       293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         293 KRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             ceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6789999999999999988899999865

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=98.86  E-value=2.4e-08  Score=69.56  Aligned_cols=94  Identities=17%  Similarity=0.190  Sum_probs=70.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC-ceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG-KLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G-~l~~~~~~~   80 (109)
                      ++.++++++++|+++.+|..+..      ..++...++.+++++.|+....+    .+.+.++++++.+| ++.+.+..+
T Consensus       246 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  315 (341)
T PRK05396        246 FRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGREM----FETWYKMSALLQSGLDLSPIITHR  315 (341)
T ss_pred             HHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccCc----cchHHHHHHHHHcCCChhHheEEE
Confidence            45678999999999999975431      12335677889999998863222    23456778899998 455556667


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++++++.+||+.+.++. .||++++.
T Consensus       316 ~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        316 FPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             EeHHHHHHHHHHHhcCC-CceEEEec
Confidence            89999999999999877 89999865

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=98.86  E-value=4e-08  Score=68.27  Aligned_cols=92  Identities=17%  Similarity=0.166  Sum_probs=71.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++|+++|+++.+|..+.   +   .+.++..++.+++++.|+..      ..+.+.++++++++|.+++.  +..
T Consensus       245 ~~~~~~~L~~~G~~v~~g~~~~---~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~  312 (339)
T cd08232         245 LASALRVVRPGGTVVQVGMLGG---P---VPLPLNALVAKELDLRGSFR------FDDEFAEAVRLLAAGRIDVRPLITA  312 (339)
T ss_pred             HHHHHHHHhcCCEEEEEecCCC---C---ccCcHHHHhhcceEEEEEec------CHHHHHHHHHHHHcCCCCchhheeE
Confidence            4577899999999999986442   1   12334455778899988763      23467888999999998643  456


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++++++++|++.+.++...||+|++
T Consensus       313 ~~~~~~~~~a~~~~~~~~~~gkvvv~  338 (339)
T cd08232         313 VFPLEEAAEAFALAADRTRSVKVQLS  338 (339)
T ss_pred             EecHHHHHHHHHHHHhCCCceeEEEe
Confidence            68999999999999998889999986

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=98.85  E-value=4e-08  Score=67.72  Aligned_cols=93  Identities=23%  Similarity=0.283  Sum_probs=71.4

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeecc
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEG   82 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~   82 (109)
                      ..++++++++|+++.+|......     ...+......++.++.++...     ..+.++++++++++|.+++.+...++
T Consensus       240 ~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~  309 (332)
T cd08259         240 EESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSISA-----TKADVEEALKLVKEGKIKPVIDRVVS  309 (332)
T ss_pred             HHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecCC-----CHHHHHHHHHHHHcCCCccceeEEEc
Confidence            56788999999999999755421     112333344678888877421     24568889999999999887776789


Q ss_pred             cchHHHHHHHhhcCCCcceEEEE
Q 033914           83 LEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        83 l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ++++++||+.+.++...||++++
T Consensus       310 ~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         310 LEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHHcCCcccEEEeC
Confidence            99999999999999889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=98.82  E-value=5.6e-08  Score=66.50  Aligned_cols=97  Identities=18%  Similarity=0.191  Sum_probs=71.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHH--hhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQV--VGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~--~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      ++.++++++++|+++.+|..++..   ..........  ..+++++.++.....   ..+.+.++++++++|.+++....
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  294 (320)
T cd08243         221 LKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIPPSK  294 (320)
T ss_pred             HHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCceeccccc
Confidence            456789999999999999765421   0001111222  367888888764322   23467889999999999876666


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++++++|++.+.++...||+|+
T Consensus       295 ~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         295 VFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             EEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            7899999999999999988999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=98.82  E-value=4.1e-08  Score=68.27  Aligned_cols=93  Identities=20%  Similarity=0.205  Sum_probs=69.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +..++++++++|+++.+|.....   .   .......+.+++++.++...     .++.+.++++++++|.+++.  +..
T Consensus       247 ~~~~~~~l~~~g~~v~~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~g~i~~~~~i~~  315 (341)
T cd08262         247 IQQIIEGAPPGGRIVVVGVCMES---D---NIEPALAIRKELTLQFSLGY-----TPEEFADALDALAEGKVDVAPMVTG  315 (341)
T ss_pred             HHHHHHHhccCCEEEEECCCCCC---C---ccCHHHHhhcceEEEEEecc-----cHHHHHHHHHHHHcCCCChHHheEE
Confidence            35678899999999999975431   1   11222235688888865432     14467889999999999864  355


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++++++++|++.+.+++..||+|++
T Consensus       316 ~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         316 TVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             EeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            68999999999999999999999973

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=98.81  E-value=5.4e-08  Score=67.85  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=73.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +..++++++++|+++.+|......  . ....++..++.+++++.|+....     .+.++++++++++|++.+.  +..
T Consensus       247 ~~~~~~~l~~~g~~i~~g~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~  318 (345)
T cd08260         247 CRNSVASLRKRGRHVQVGLTLGEE--A-GVALPMDRVVARELEIVGSHGMP-----AHRYDAMLALIASGKLDPEPLVGR  318 (345)
T ss_pred             HHHHHHHhhcCCEEEEeCCcCCCC--C-ccccCHHHHhhcccEEEeCCcCC-----HHHHHHHHHHHHcCCCChhhheeE
Confidence            356789999999999999865421  0 01345556678999999976421     4567888999999998864  445


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      .++++++.+||+.+++++..||+|++
T Consensus       319 ~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         319 TISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             EecHHHHHHHHHHHHcCCCCceEEec
Confidence            67999999999999999999999864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=98.81  E-value=4.7e-08  Score=69.18  Aligned_cols=99  Identities=17%  Similarity=0.087  Sum_probs=73.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-------CccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-------SEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-------~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++|+++.+|..+......       ....+++..+..++.++.+....     .++.+.++++++++|+++
T Consensus       268 ~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~  342 (375)
T cd08282         268 LNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAK  342 (375)
T ss_pred             HHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCC
Confidence            567889999999999999754211100       01123555677788888776432     245678889999999998


Q ss_pred             ee--eeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           75 YV--EDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        75 ~~--~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +.  +..+++++++++||+.+.++. .||+|+++
T Consensus       343 ~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         343 PSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             hHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            74  566789999999999999988 99999853

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=98.80  E-value=7.1e-08  Score=66.76  Aligned_cols=96  Identities=17%  Similarity=0.078  Sum_probs=71.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc---c----chHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY---H----QYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~---~----~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++|+++.+|....        .++...++.+++++.++....+.   .    ...+.+.++++++.+|.++
T Consensus       231 ~~~~~~~l~~~g~~v~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  302 (336)
T cd08252         231 WDAMAELIAPQGHICLIVDPQE--------PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLK  302 (336)
T ss_pred             HHHHHHHhcCCCEEEEecCCCC--------cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEe
Confidence            4567899999999999986421        23344455788999886653211   1    2235688899999999999


Q ss_pred             eeee---eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           75 YVED---IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        75 ~~~~---~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +...   ..++++++++|++.+.+++..||++++
T Consensus       303 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         303 TTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             cceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            7533   236999999999999999999999863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=98.80  E-value=5.4e-08  Score=67.26  Aligned_cols=98  Identities=16%  Similarity=0.088  Sum_probs=65.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcc------eeeeeeeecccccchHHHHHHHHHHHHcCceee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKR------IRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY   75 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~------~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~   75 (109)
                      +..++++++++|+++.+|..+..     ....+...+..++      .++.+++  ...+...+.+.++++++.+|++++
T Consensus       222 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~l~~  294 (327)
T PRK10754        222 WEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYI--TTREELTEASNELFSLIASGVIKV  294 (327)
T ss_pred             HHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeeccc--CCHHHHHHHHHHHHHHHHCCCeee
Confidence            35678899999999999976531     0112222222221      1222322  111233445677899999999986


Q ss_pred             ee--eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           76 VE--DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        76 ~~--~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..  ..+++++++++|++.+.++...||+|+.+
T Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        295 DVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             ecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            53  45689999999999999999999999864

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=98.80  E-value=4.9e-08  Score=68.86  Aligned_cols=97  Identities=15%  Similarity=0.208  Sum_probs=71.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee-eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY-VEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~-~~~~~   80 (109)
                      ++.++++++++|+++.+|.....    +...+++..++.+++++.++....+.  ..+.+.++++++++|++++ ....+
T Consensus       268 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~~~~  341 (365)
T cd08278         268 IEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLVSGKTIRGVIEGDSV--PQEFIPRLIELYRQGKFPFDKLVTF  341 (365)
T ss_pred             HHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhhcCceEEEeecCCcC--hHHHHHHHHHHHHcCCCChHHheEE
Confidence            46788999999999999975321    11235566666899999988754321  2456788999999999865 23446


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEE
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ++|+++++||+.+.+++. -|+|++
T Consensus       342 ~~l~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         342 YPFEDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             ecHHHHHHHHHHHHCCCc-eEEEEC
Confidence            899999999999998765 488763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=98.79  E-value=6.1e-08  Score=67.00  Aligned_cols=103  Identities=27%  Similarity=0.478  Sum_probs=74.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-----CccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-----SEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-----~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      +..++++++++|+++.+|..++...+.     ....++ ...+.+++++.++....+....++.+.++++++++|.+++.
T Consensus       220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  298 (329)
T cd08250         220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCE  298 (329)
T ss_pred             HHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeee
Confidence            356789999999999999765421000     000111 24577889999987643332345678889999999999985


Q ss_pred             ee--eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           77 ED--IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        77 ~~--~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ..  .+++++++.+|++.+.++...||++++
T Consensus       299 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         299 VDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             ECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            42  347999999999999998888999873

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=98.79  E-value=6.3e-08  Score=67.34  Aligned_cols=94  Identities=18%  Similarity=0.116  Sum_probs=71.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      +..++++++++|+++.+|..+..+    ...++...+..+++++.+++...     ++.++++++++++|.+++  .+..
T Consensus       248 ~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~  318 (343)
T cd08235         248 QAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITITGSYAAS-----PEDYKEALELIASGKIDVKDLITH  318 (343)
T ss_pred             HHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEEEEEecCC-----hhhHHHHHHHHHcCCCChHHheee
Confidence            356788999999999999755421    11334456777888988876422     456788899999999873  3455


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +++++++.+|++.+.+++ .||+|++
T Consensus       319 ~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         319 RFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             EeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            689999999999999999 9999973

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=98.79  E-value=6e-08  Score=67.47  Aligned_cols=94  Identities=17%  Similarity=0.057  Sum_probs=70.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|......     ...+....+.+++++.+....     ..+.+.++++++++|++++.  +..
T Consensus       249 ~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~  318 (344)
T cd08284         249 LDLAFDLVRPGGVISSVGVHTAEE-----FPFPGLDAYNKNLTLRFGRCP-----VRSLFPELLPLLESGRLDLEFLIDH  318 (344)
T ss_pred             HHHHHHhcccCCEEEEECcCCCCC-----ccccHHHHhhcCcEEEEecCC-----cchhHHHHHHHHHcCCCChHHhEee
Confidence            456789999999999999765321     123345567888888765311     34578889999999999863  455


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++++||+.+.+++. ||+|+++
T Consensus       319 ~~~~~~~~~a~~~~~~~~~-~k~Vi~~  344 (344)
T cd08284         319 RMPLEEAPEAYRLFDKRKV-LKVVLDP  344 (344)
T ss_pred             eecHHHHHHHHHHHhcCCc-eEEEecC
Confidence            6799999999999998887 9999853

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=98.78  E-value=4.8e-08  Score=68.31  Aligned_cols=91  Identities=15%  Similarity=0.095  Sum_probs=68.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-hhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--ee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQV-VGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--ED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~-~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~   78 (109)
                      +..++++++++|+++.+|.....      ...++..+ ..+++++.|+....      ..+.++++++++|.+++.  +.
T Consensus       257 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~  324 (350)
T cd08256         257 VEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELDVLGSHLGP------YCYPIAIDLIASGRLPTDGIVT  324 (350)
T ss_pred             HHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccEEEEeccCc------hhHHHHHHHHHcCCCChhHheE
Confidence            35678999999999999864421      12233333 36788888876542      257788999999999874  45


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      .+++++++++||+.++++...||+|+
T Consensus       325 ~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         325 HQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            66899999999999999988999875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=98.78  E-value=9.4e-08  Score=65.40  Aligned_cols=97  Identities=16%  Similarity=0.065  Sum_probs=73.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|..+..    + .++++..+..+++++.++..... ....+.++++++++++|.+++.  ...
T Consensus       212 ~~~~~~~l~~~g~~~~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (312)
T cd08269         212 LDLAGELVAERGRLVIFGYHQDG----P-RPVPFQTWNWKGIDLINAVERDP-RIGLEGMREAVKLIADGRLDLGSLLTH  285 (312)
T ss_pred             HHHHHHHhccCCEEEEEccCCCC----C-cccCHHHHhhcCCEEEEecccCc-cchhhHHHHHHHHHHcCCCCchhheee
Confidence            45678999999999999975421    1 13445567788999888764332 2234678889999999999873  455


Q ss_pred             ecccchHHHHHHHhhcCCC-cceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQN-VGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~-~GKvvv  104 (109)
                      +++++++++|++.+.+++. .+|+++
T Consensus       286 ~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         286 EFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eecHHHHHHHHHHHHhCCCCceEEEe
Confidence            6899999999999999865 689987

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=98.78  E-value=1e-07  Score=65.69  Aligned_cols=98  Identities=18%  Similarity=0.209  Sum_probs=73.4

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +.++.+++.+|+++.+|...+.    + .+.++..++.+++++.|+...... ....+.+..+.+++.+|.+++. ...+
T Consensus       226 ~~~~~~~~~~g~~~~~G~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~  299 (324)
T cd08288         226 ANVLAQTRYGGAVAACGLAGGA----D-LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL-TREI  299 (324)
T ss_pred             HHHHHHhcCCCEEEEEEecCCC----C-CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc-ceee
Confidence            4567788999999999986431    1 123344556899999998643222 2345677888899999988774 4567


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++||+.+.+++..||+++++
T Consensus       300 ~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         300 PLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             cHHHHHHHHHHHhcCCccCeEEEeC
Confidence            9999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=98.77  E-value=9.9e-08  Score=65.05  Aligned_cols=99  Identities=21%  Similarity=0.210  Sum_probs=74.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccc----hHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQ----YPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++|+++.+|..+..     ....+....+.+++++.|+....+...    ..+.+.++++++.++.+++..
T Consensus       221 ~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (323)
T cd08241         221 FEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHV  295 (323)
T ss_pred             HHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccccc
Confidence            35678899999999999975431     111223345778999999876544322    235678899999999998776


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEE
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ...++++++.+|++.+.++...||++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         296 SAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             ceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            6678999999999999988888999863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=98.76  E-value=8.6e-08  Score=66.81  Aligned_cols=93  Identities=19%  Similarity=0.201  Sum_probs=69.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchH-HHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLM-QVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~-~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~   78 (109)
                      ++.++++++++|+++.+|.....   .   +.+.. .++.+++++.+++...    +.+.+.++++++++|+++  +.+.
T Consensus       244 ~~~~~~~l~~~g~~v~~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~  313 (340)
T TIGR00692       244 LEQGLQAVTPGGRVSLLGLPPGK---V---TIDFTNKVIFKGLTIYGITGRH----MFETWYTVSRLIQSGKLDLDPIIT  313 (340)
T ss_pred             HHHHHHhhcCCCEEEEEccCCCC---c---ccchhhhhhhcceEEEEEecCC----chhhHHHHHHHHHcCCCChHHhee
Confidence            35678899999999999975421   1   12233 5677888988876322    235678899999999987  3345


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      ..++++++.+|++.+.+++ .||+|++
T Consensus       314 ~~~~l~~~~~a~~~~~~~~-~gkvvv~  339 (340)
T TIGR00692       314 HKFKFDKFEKGFELMRSGQ-TGKVILS  339 (340)
T ss_pred             eeeeHHHHHHHHHHHhcCC-CceEEEe
Confidence            6679999999999999887 4999986

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.75  E-value=1.7e-07  Score=64.59  Aligned_cols=105  Identities=18%  Similarity=0.241  Sum_probs=75.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCC-----------ccccchHHHhhcceeeeeeeeccccc---chHHHHHHHHHH
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKS-----------EGVHNLMQVVGKRIRMEGFLAGDFYH---QYPKFLELVMRA   67 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~-----------~~~~~~~~~~~k~~~~~G~~~~~~~~---~~~~~~~~~~~~   67 (109)
                      ++.++++++++|+++.+|.....+....           ...++...++.+++++.++.......   .....+.+++++
T Consensus       219 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (337)
T cd08275         219 TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKL  298 (337)
T ss_pred             HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHH
Confidence            3567889999999999997553211000           00122245678899999987542211   122457888999


Q ss_pred             HHcCceeeeeeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           68 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        68 ~~~G~l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +.+|.+++.....+++++++++++.+.++...||+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         299 YEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            999999887767789999999999999988899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=98.74  E-value=1.1e-07  Score=65.80  Aligned_cols=91  Identities=14%  Similarity=0.070  Sum_probs=68.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|....     ....+++.. +.++..+.|+....     .+.+.++++++++|.+++. ..++
T Consensus       239 ~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~~-----~~~~~~~~~l~~~~~l~~~-~~~~  306 (329)
T cd08298         239 VPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANLT-----RQDGEEFLKLAAEIPIKPE-VETY  306 (329)
T ss_pred             HHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCCC-----HHHHHHHHHHHHcCCCCce-EEEE
Confidence            5678999999999999985332     111233333 56788888876421     3467888999999999875 4568


Q ss_pred             ccchHHHHHHHhhcCCCcceEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++.+||+.+++++..||+|+
T Consensus       307 ~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         307 PLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             eHHHHHHHHHHHHcCCCcceeeC
Confidence            99999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=98.74  E-value=1.1e-07  Score=64.69  Aligned_cols=97  Identities=20%  Similarity=0.230  Sum_probs=73.0

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-c----chHHHHHHHHHHHHcCceeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-H----QYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~----~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ..++++++++|+++.+|..+...     ...++..++.+++++.|+...... .    .....+.++++++.+|++++..
T Consensus       222 ~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (323)
T cd05276         222 ARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVI  296 (323)
T ss_pred             HHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCc
Confidence            45778899999999999765431     123445566799999998764321 1    1234567788899999998776


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEE
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      ...++++++++|++.+.++...||+++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         297 DKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             ceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            667899999999999998888899874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=98.73  E-value=1.6e-07  Score=64.13  Aligned_cols=100  Identities=21%  Similarity=0.229  Sum_probs=75.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc-----chHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH-----QYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      +..++++++++|+++.+|..+..+     ...++..++.+++++.|+....+..     .....+.+++++++++.+++.
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  295 (325)
T TIGR02824       221 LNRNIKALALDGRIVQIGFQGGRK-----AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV  295 (325)
T ss_pred             HHHHHHhhccCcEEEEEecCCCCc-----CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc
Confidence            356778999999999999754321     1344555668999999988644211     122456778899999999876


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ....+++++++++++.+.++...||+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       296 IDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            666689999999999999888899999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05281 TDH Threonine dehydrogenase

Probab=98.72  E-value=1e-07  Score=66.43  Aligned_cols=94  Identities=19%  Similarity=0.170  Sum_probs=69.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++|+++|+++.+|..+..   .   ..++ ..+..+++++.++....    ..+.+.++.+++++|.+++  .+.
T Consensus       245 ~~~~~~~l~~~G~~v~~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~  314 (341)
T cd05281         245 IEQGLKALTPGGRVSILGLPPGP---V---DIDLNNLVIFKGLTVQGITGRK----MFETWYQVSALLKSGKVDLSPVIT  314 (341)
T ss_pred             HHHHHHHhccCCEEEEEccCCCC---c---ccccchhhhccceEEEEEecCC----cchhHHHHHHHHHcCCCChhHheE
Confidence            35678999999999999875431   1   1122 23677888888876322    2345778899999999863  344


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..++++++++||+.+.++. .||+|+++
T Consensus       315 ~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         315 HKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             EEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            4579999999999999998 99999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=98.72  E-value=1.4e-07  Score=65.78  Aligned_cols=93  Identities=13%  Similarity=0.123  Sum_probs=70.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|...+.      ..+++...+.+++++.+....     ..+.+.++++++++|++++.  +..
T Consensus       251 ~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~  319 (345)
T cd08287         251 MEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRNVGLAGGPAP-----VRRYLPELLDDVLAGRINPGRVFDL  319 (345)
T ss_pred             HHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcceEEEEecCC-----cHHHHHHHHHHHHcCCCCHHHhEEe
Confidence            46788999999999999875421      124444567899999886432     24578889999999999863  455


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++++|++.+.++.. .|++|++
T Consensus       320 ~~~l~~~~~a~~~~~~~~~-~k~~~~~  345 (345)
T cd08287         320 TLPLDEVAEGYRAMDERRA-IKVLLRP  345 (345)
T ss_pred             eecHHHHHHHHHHHhCCCc-eEEEeCC
Confidence            6899999999999887765 4999863

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=98.71  E-value=1.3e-07  Score=65.73  Aligned_cols=95  Identities=17%  Similarity=0.056  Sum_probs=69.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|...+.    ..... ....+.+++++.++....     .+.+.++++++++|.+++.  +..
T Consensus       250 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~  319 (347)
T cd05278         250 FEQAVKVVRPGGTIANVGVYGKP----DPLPL-LGEWFGKNLTFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITH  319 (347)
T ss_pred             HHHHHHHhhcCCEEEEEcCCCCC----cccCc-cchhhhceeEEEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEE
Confidence            45678999999999999965431    10011 123356888888765321     4578889999999999864  445


Q ss_pred             ecccchHHHHHHHhhcCCC-cceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQN-VGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~-~GKvvv~~  106 (109)
                      .++++++.+|++.+.+++. .+|+|+++
T Consensus       320 ~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         320 RFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             EecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            6899999999999988877 78999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=98.70  E-value=2.1e-07  Score=65.55  Aligned_cols=96  Identities=16%  Similarity=0.177  Sum_probs=71.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++|+++.+|.....    ....++...+..++.++.|++.+..  ...+.++++++++++|++++.  +..
T Consensus       265 ~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~  338 (363)
T cd08279         265 IRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTR  338 (363)
T ss_pred             HHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEE
Confidence            35678999999999999875421    1123455566778888888765322  235678899999999999863  455


Q ss_pred             ecccchHHHHHHHhhcCCCcceEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQL  103 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvv  103 (109)
                      +++++++.+||+.+++++..+.|+
T Consensus       339 ~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         339 RYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EEcHHHHHHHHHHHhcCCceeEEe
Confidence            689999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=98.70  E-value=1.8e-07  Score=65.25  Aligned_cols=92  Identities=15%  Similarity=0.074  Sum_probs=68.7

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDIA   80 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~~   80 (109)
                      +.++++++++|+++.+|.....      .++++..++.+++++.+....      .+.+.++.+++++|.+++.  +..+
T Consensus       250 ~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~  317 (345)
T cd08286         250 ELCQELVAPGGHIANVGVHGKP------VDLHLEKLWIKNITITTGLVD------TNTTPMLLKLVSSGKLDPSKLVTHR  317 (345)
T ss_pred             HHHHHhccCCcEEEEecccCCC------CCcCHHHHhhcCcEEEeecCc------hhhHHHHHHHHHcCCCChHHcEEeE
Confidence            5567899999999999974321      234555667899999886432      1357788899999998763  4566


Q ss_pred             cccchHHHHHHHhhcCCC--cceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQN--VGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~--~GKvvv~~  106 (109)
                      ++++++.+|++.+.+...  ..|++|++
T Consensus       318 ~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         318 FKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             eeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            899999999999987643  45998864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=98.69  E-value=2.4e-07  Score=64.43  Aligned_cols=93  Identities=15%  Similarity=0.061  Sum_probs=71.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      +..++++++++|+++.+|.....      ...+...+..+++++.+...     ...+.++++.+++++|.+++  .+..
T Consensus       241 ~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~i~~~~~~~~  309 (337)
T cd08261         241 MEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSRN-----ATREDFPDVIDLLESGKVDPEALITH  309 (337)
T ss_pred             HHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEecc-----CChhhHHHHHHHHHcCCCChhhheEE
Confidence            35678899999999999875421      12334456678888887632     13457888999999999997  6666


Q ss_pred             ecccchHHHHHHHhhcC-CCcceEEEE
Q 033914           80 AEGLEKAPSALVGIFTG-QNVGKQLVV  105 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g-~~~GKvvv~  105 (109)
                      +++++++.+|++.+.++ ...||+|++
T Consensus       310 ~~~~~~~~~a~~~~~~~~~~~~k~v~~  336 (337)
T cd08261         310 RFPFEDVPEAFDLWEAPPGGVIKVLIE  336 (337)
T ss_pred             EeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence            78999999999999988 478999986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=98.69  E-value=2.5e-07  Score=64.07  Aligned_cols=92  Identities=20%  Similarity=0.226  Sum_probs=69.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +..++++++++|+++.+|.....   .. ...+...++.+++++.++...      .+.++++++++++|++++.  +..
T Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~  309 (334)
T cd08234         240 LEQAIEYARRGGTVLVFGVYAPD---AR-VSISPFEIFQKELTIIGSFIN------PYTFPRAIALLESGKIDVKGLVSH  309 (334)
T ss_pred             HHHHHHHHhcCCEEEEEecCCCC---CC-cccCHHHHHhCCcEEEEeccC------HHHHHHHHHHHHcCCCChhhhEEE
Confidence            35678899999999999975431   11 123344456688899887642      3467889999999999753  455


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++++++|++.+.+ ...||+|+
T Consensus       310 ~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         310 RLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EecHHHHHHHHHHHhc-CCceEEEe
Confidence            6899999999999998 77899986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=98.68  E-value=2.4e-07  Score=64.12  Aligned_cols=92  Identities=20%  Similarity=0.178  Sum_probs=71.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ...++++++++|+++.+|.....    . ...+...++.++.++.|+..+.     ...++++++++.+|.+++.. ..+
T Consensus       239 ~~~~~~~l~~~G~~i~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~~~-~~~  307 (330)
T cd08245         239 AEAALGGLRRGGRIVLVGLPESP----P-FSPDIFPLIMKRQSIAGSTHGG-----RADLQEALDFAAEGKVKPMI-ETF  307 (330)
T ss_pred             HHHHHHhcccCCEEEEECCCCCC----c-cccchHHHHhCCCEEEEeccCC-----HHHHHHHHHHHHcCCCcceE-EEE
Confidence            35678999999999999975432    1 1122445778899999887542     34678888999999998643 457


Q ss_pred             ccchHHHHHHHhhcCCCcceEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++.+||+.+.++...||+|+
T Consensus       308 ~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         308 PLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             cHHHHHHHHHHHHcCCCCcceeC
Confidence            99999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.67  E-value=1.3e-07  Score=65.55  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=72.5

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +.+++.+.+.| |.-|++|..+..    ...+..+.. +.+..++.|+..+.|..  +.++..+.+.+.+++++....++
T Consensus       276 m~~al~s~h~GwG~sv~iGv~~~~----~~i~~~p~~-l~~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~IT  348 (375)
T KOG0022|consen  276 MRAALESCHKGWGKSVVIGVAAAG----QEISTRPFQ-LVTGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFIT  348 (375)
T ss_pred             HHHHHHHhhcCCCeEEEEEecCCC----cccccchhh-hccccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhh
Confidence            56889999999 999999986542    112334444 44577888888777653  45677888888999999887666


Q ss_pred             c--ccchHHHHHHHhhcCCCcceEEEE
Q 033914           81 E--GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        81 ~--~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      |  ||+++++||++|.+|+.. |-|+.
T Consensus       349 h~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  349 HELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             cccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            4  999999999999999865 76664

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=98.67  E-value=2.5e-07  Score=64.55  Aligned_cols=91  Identities=18%  Similarity=0.153  Sum_probs=68.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      ++.++++++++|+++.+|.....      ..++...+..+.+++.+++..      .+.+.+++++++++.+.  +....
T Consensus       248 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~  315 (343)
T cd05285         248 IQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANTYPTAIELLASGKVDVKPLITH  315 (343)
T ss_pred             HHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHHHHHHHHHHHcCCCCchHhEEE
Confidence            35678899999999999964431      123445677888898887532      24677888999999875  33455


Q ss_pred             ecccchHHHHHHHhhcCC-CcceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQ-NVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~-~~GKvvv  104 (109)
                      +++++++.+|++.+.+++ ..+|+++
T Consensus       316 ~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         316 RFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            689999999999999874 4699987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=98.65  E-value=2.7e-07  Score=65.56  Aligned_cols=92  Identities=16%  Similarity=0.147  Sum_probs=68.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      ++.++++++++||++.+|..+..      .++++..+..+..++.|+....    ....+.++++++++|.+++.  ...
T Consensus       290 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~  359 (384)
T cd08265         290 IPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITA  359 (384)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEE
Confidence            35678899999999999975431      1234456777888888875321    13357889999999999864  445


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEE
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++++.+|++.+.++ ..||+|+
T Consensus       360 ~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         360 RFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             EeeHHHHHHHHHHHhcC-CCceEEe
Confidence            68999999999997665 5799986

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.65  E-value=4e-07  Score=62.24  Aligned_cols=100  Identities=17%  Similarity=0.229  Sum_probs=73.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ...++++++++|+++.+|.....   .  ...+....+.+++++.++.....   .......+..+.+++.++.+.+...
T Consensus       226 ~~~~~~~l~~~g~~v~~g~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (328)
T cd08268         226 FAKLADALAPGGTLVVYGALSGE---P--TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVD  300 (328)
T ss_pred             HHHHHHhhccCCEEEEEEeCCCC---C--CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence            35678899999999999975431   1  12334446889999998865432   1233455677777888998887766


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .+++++++.++++.+.++...||+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         301 RVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6789999999999999888899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=98.64  E-value=2.4e-07  Score=63.95  Aligned_cols=90  Identities=24%  Similarity=0.220  Sum_probs=68.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|.....     ...+++..++.++.++.|+..+.     ++.+.++++++..++  ..+..++
T Consensus       236 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~--~~~~~~~  303 (325)
T cd08264         236 WDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT-----RKELLELVKIAKDLK--VKVWKTF  303 (325)
T ss_pred             HHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC-----HHHHHHHHHHHHcCC--ceeEEEE
Confidence            46789999999999999974221     12456667778899999876442     456778888886554  4455668


Q ss_pred             ccchHHHHHHHhhcCCCcceEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQL  103 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvv  103 (109)
                      +++++++|++.+.++...||++
T Consensus       304 ~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         304 KLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             cHHHHHHHHHHHHcCCCccccC
Confidence            9999999999999888888863

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=98.62  E-value=5.6e-07  Score=62.34  Aligned_cols=95  Identities=17%  Similarity=0.119  Sum_probs=66.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeec--c-cc--cc--hHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAG--D-FY--HQ--YPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~--~-~~--~~--~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++|+++.++...         ..+...+..+++++.++...  . +.  ..  ..+.+.++++++.+|.++
T Consensus       230 ~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  300 (336)
T TIGR02817       230 FKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR  300 (336)
T ss_pred             HHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence            456789999999999885321         12334455566777764432  1 11  11  124678899999999998


Q ss_pred             eeeeeec---ccchHHHHHHHhhcCCCcceEEEE
Q 033914           75 YVEDIAE---GLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        75 ~~~~~~~---~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +.+..++   +++++.+||+.+.+++..||+++.
T Consensus       301 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       301 TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            7655444   479999999999999999999874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=98.60  E-value=2.6e-07  Score=65.29  Aligned_cols=104  Identities=14%  Similarity=0.140  Sum_probs=69.0

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHcCceeeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ..++.++..+|+...+|..++...+... ...+..+........+.+..++    ....++.+..+.++++.|+|+|.++
T Consensus       239 ~~~~~~l~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~  317 (347)
T KOG1198|consen  239 TKSLSCLLKGGGGAYIGLVGDELANYKL-DDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVID  317 (347)
T ss_pred             ccchhhhccCCceEEEEecccccccccc-ccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcc
Confidence            3466788889988888876654221110 1000001111111111111111    1234678999999999999999999


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ..|||+++.+||+.+.++...||+++.+.
T Consensus       318 ~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  318 SVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             eeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            99999999999999999889999999864

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.59  E-value=6.5e-07  Score=61.07  Aligned_cols=98  Identities=20%  Similarity=0.171  Sum_probs=72.9

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +.++++++++|+++.+|.....      .+.++..++.+..++.++...... ....+.+.++.+++.+|.+++.....+
T Consensus       227 ~~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (325)
T cd08253         227 AKDLDVLAPGGRIVVYGSGGLR------GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREY  300 (325)
T ss_pred             HHHHHhhCCCCEEEEEeecCCc------CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEE
Confidence            4567889999999999975411      123344456788888887643221 233456777888999999987766678


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++++++++++.+.++...||+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         301 PLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             cHHHHHHHHHHHHcCCCcceEEEeC
Confidence            9999999999999998999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.57  E-value=5.9e-07  Score=62.00  Aligned_cols=101  Identities=13%  Similarity=0.064  Sum_probs=67.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch----------HHHhhcceeeeeeeecccc----cchHHHHHHHHHH
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL----------MQVVGKRIRMEGFLAGDFY----HQYPKFLELVMRA   67 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~----------~~~~~k~~~~~G~~~~~~~----~~~~~~~~~~~~~   67 (109)
                      ++.++++++.+|+++.+|.....+.. . ..++.          ........++.++....+.    +..++.+.+++++
T Consensus       216 ~~~~~~~l~~~g~~v~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  293 (331)
T cd08273         216 YEESYAALAPGGTLVCYGGNSSLLQG-R-RSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDL  293 (331)
T ss_pred             HHHHHHHhcCCCEEEEEccCCCCCCc-c-ccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHH
Confidence            35678999999999999976543110 0 00100          0122233333333321111    2245678899999


Q ss_pred             HHcCceeeeeeeecccchHHHHHHHhhcCCCcceEEE
Q 033914           68 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        68 ~~~G~l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++|.+++....+++++++++|++.+.+++..||+|+
T Consensus       294 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         294 LAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            9999998876667899999999999999888999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=98.56  E-value=8.9e-07  Score=60.08  Aligned_cols=89  Identities=19%  Similarity=0.131  Sum_probs=68.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ...++++++++|+++.+|.....        ..  ....+++++..+.....    .+.+.+++++++++.+++.+..++
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~--------~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  286 (309)
T cd05289         221 LARSLALVKPGGRLVSIAGPPPA--------EQ--AAKRRGVRAGFVFVEPD----GEQLAELAELVEAGKLRPVVDRVF  286 (309)
T ss_pred             HHHHHHHHhcCcEEEEEcCCCcc--------hh--hhhhccceEEEEEeccc----HHHHHHHHHHHHCCCEEEeeccEE
Confidence            35678999999999999974321        11  33456677776654221    567888999999999988766678


Q ss_pred             ccchHHHHHHHhhcCCCcceEEE
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      +++++.+|++.+..++..||+++
T Consensus       287 ~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         287 PLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cHHHHHHHHHHHHhCCCCCcEeC
Confidence            99999999999998888899874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=98.55  E-value=8.5e-07  Score=62.61  Aligned_cols=95  Identities=12%  Similarity=0.081  Sum_probs=70.2

Q ss_pred             HHHHHHhhc-cCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--ee
Q 033914            2 LDAVRLNMR-IRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--ED   78 (109)
Q Consensus         2 ~~~~l~~l~-~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~   78 (109)
                      ++.++++++ ++|+++.+|.....    ....++...+ .++.++.|++.+.+.  ..+.+.++++++++|.+++.  ..
T Consensus       267 ~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~-~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~  339 (365)
T cd05279         267 LKQALDATRLGGGTSVVVGVPPSG----TEATLDPNDL-LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELIT  339 (365)
T ss_pred             HHHHHHHhccCCCEEEEEecCCCC----CceeeCHHHH-hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHhee
Confidence            456789999 99999999975311    0123445555 788899998765543  24568889999999999864  55


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      .+++++++++||+.+++++. .|+++
T Consensus       340 ~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         340 HVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             eeecHHHHHHHHHHHhCCCc-eeeee
Confidence            56799999999999988765 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.55  E-value=1.2e-06  Score=59.99  Aligned_cols=95  Identities=20%  Similarity=0.193  Sum_probs=70.7

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecc--c----ccchHHHHHHHHHHHHcCceeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGD--F----YHQYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~--~----~~~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      ..++++++++|+++.+|....         .++.....+++++.++....  .    .....+.+.++++++.++.+++.
T Consensus       225 ~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  295 (326)
T cd08272         225 DASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPL  295 (326)
T ss_pred             HHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccc
Confidence            457889999999999987531         11222347888888876432  1    11234578888999999999876


Q ss_pred             ee-eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           77 ED-IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        77 ~~-~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +. ..++++++.+|++.+.+++..||+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         296 LDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            54 6689999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=98.54  E-value=5.2e-07  Score=61.03  Aligned_cols=97  Identities=20%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc-------chHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH-------QYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~-------~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++|+++.+|.....    .  ......+..+.+++.++.......       ...+.++++++++.+|.++
T Consensus       173 ~~~~~~~l~~~g~~~~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  246 (277)
T cd08255         173 LETALRLLRDRGRVVLVGWYGLK----P--LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE  246 (277)
T ss_pred             HHHHHHHhcCCcEEEEEeccCCC----c--cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc
Confidence            35678899999999999975542    1  111123555777888776532211       1125688899999999998


Q ss_pred             eeeeeecccchHHHHHHHhhcC-CCcceEEE
Q 033914           75 YVEDIAEGLEKAPSALVGIFTG-QNVGKQLV  104 (109)
Q Consensus        75 ~~~~~~~~l~~~~~A~~~l~~g-~~~GKvvv  104 (109)
                      +.....++++++.+||+.+.++ ....|+++
T Consensus       247 ~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         247 ALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            8766678999999999999877 33577764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=98.53  E-value=7.7e-07  Score=62.12  Aligned_cols=93  Identities=15%  Similarity=0.053  Sum_probs=64.9

Q ss_pred             HHHHHHhhcc--CCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecc-------cccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRI--RGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGD-------FYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~--~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +..+++++++  +|+++.+|.....+            .+....++..+....       ........+.++.+++++|+
T Consensus       235 ~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (339)
T cd08249         235 AQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGK  302 (339)
T ss_pred             HHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCC
Confidence            4578899999  99999999755421            011122222222111       11223356778999999999


Q ss_pred             eeeeeeeecc--cchHHHHHHHhhcCC-CcceEEEEe
Q 033914           73 LVYVEDIAEG--LEKAPSALVGIFTGQ-NVGKQLVVI  106 (109)
Q Consensus        73 l~~~~~~~~~--l~~~~~A~~~l~~g~-~~GKvvv~~  106 (109)
                      +.+....+++  ++++++||+.+..++ ..||+|+++
T Consensus       303 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         303 LKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            9987656677  999999999999998 899999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=98.50  E-value=6.5e-07  Score=59.99  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=69.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF----YHQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++|+++.+|.....+  ..  ..+. ..+.+.+++.++....+    .....+.+.++++++++|++++..
T Consensus       192 ~~~~~~~l~~~g~~v~~g~~~~~~--~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (293)
T cd05195         192 LRASWRCLAPFGRFVEIGKRDILS--NS--KLGM-RPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLP  266 (293)
T ss_pred             HHHHHHhcccCceEEEeecccccc--CC--ccch-hhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCC
Confidence            466789999999999999765421  00  1112 22345566666543322    112345678899999999998877


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEE
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      ..+++++++++|++.+.++...||+++
T Consensus       267 ~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         267 PTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             CeeechhhHHHHHHHHhcCCCCceecC
Confidence            777899999999999999988899874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.49  E-value=1.1e-06  Score=60.25  Aligned_cols=100  Identities=14%  Similarity=0.085  Sum_probs=69.2

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      ..++++++++|+++.+|......   ...+. ...+..+++.+.+++.....   ....+.+.++++++.++.+++....
T Consensus       223 ~~~~~~l~~~G~~v~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  298 (325)
T cd08271         223 AALAPTLAFNGHLVCIQGRPDAS---PDPPF-TRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIE  298 (325)
T ss_pred             HHHHHhhccCCEEEEEcCCCCCc---chhHH-hhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccce
Confidence            45788999999999998644310   00011 11234556666655432210   2244567889999999999877666


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++++++.+|++.+.++...||+++++
T Consensus       299 ~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         299 VLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             EEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            689999999999999988899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=98.47  E-value=3.6e-07  Score=55.39  Aligned_cols=59  Identities=25%  Similarity=0.356  Sum_probs=46.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKE   70 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~   70 (109)
                      ++.++++++++|+++++|..++.     ..+++...++.|++++.|++.++     ++.++++++++++
T Consensus        72 ~~~~~~~l~~~G~~v~vg~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la~  130 (130)
T PF00107_consen   72 LQEAIKLLRPGGRIVVVGVYGGD-----PISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHHHHHEEEEEEEEEESSTSTS-----EEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH-
T ss_pred             HHHHHHHhccCCEEEEEEccCCC-----CCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhcC
Confidence            67899999999999999997731     23577889999999999998754     4566777777653

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=98.47  E-value=3.6e-07  Score=62.38  Aligned_cols=76  Identities=14%  Similarity=0.228  Sum_probs=55.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC--ceee--ee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG--KLVY--VE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G--~l~~--~~   77 (109)
                      ++.++++++++|+++.+|.....   .+ .++++..++.|++++.|++.+.     ++.+.+++++++++  ++++  .+
T Consensus       201 ~~~~~~~l~~~G~iv~~G~~~~~---~~-~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~i  271 (280)
T TIGR03366       201 VRACLESLDVGGTAVLAGSVFPG---GP-VALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELV  271 (280)
T ss_pred             HHHHHHHhcCCCEEEEeccCCCC---Cc-eeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHh
Confidence            56789999999999999975421   01 2456778899999999987432     35688899999985  4543  24


Q ss_pred             eeecccchH
Q 033914           78 DIAEGLEKA   86 (109)
Q Consensus        78 ~~~~~l~~~   86 (109)
                      +.+|||||+
T Consensus       272 t~~~~l~~~  280 (280)
T TIGR03366       272 GKPFPLADV  280 (280)
T ss_pred             hcccccccC
Confidence            455788874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>smart00829 PKS_ER Enoylreductase

Probab=98.44  E-value=1.7e-06  Score=58.02  Aligned_cols=98  Identities=15%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF---YHQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ++.++++++++|+++.+|.....+   . ...+... +.+++++.++....+   .....+.+.++++++++|++++...
T Consensus       188 ~~~~~~~l~~~g~~v~~g~~~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (288)
T smart00829      188 LDASLRCLAPGGRFVEIGKRDIRD---N-SQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPV  262 (288)
T ss_pred             HHHHHHhccCCcEEEEEcCcCCcc---c-cccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCc
Confidence            356788999999999999754321   0 1222222 456777777654211   1122345778889999999887655


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEE
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      ..++++++++|++.+.+++..||+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      263 TVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             eEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            66899999999999999888889874

Enoylreductase in Polyketide synthases.

>cd08251 polyketide_synthase polyketide synthase

Probab=98.39  E-value=7.3e-07  Score=60.41  Aligned_cols=98  Identities=12%  Similarity=0.048  Sum_probs=64.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeec----ccccchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAG----DFYHQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~----~~~~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      +..++++++++|+++.+|..+..+  ..  ..++.. +.++.++..+...    ...+...+.+.++++++++|.+++..
T Consensus       202 ~~~~~~~l~~~g~~v~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  276 (303)
T cd08251         202 IQKGLNCLAPGGRYVEIAMTALKS--AP--SVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTV  276 (303)
T ss_pred             HHHHHHHhccCcEEEEEeccCCCc--cC--ccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCC
Confidence            345788999999999998754211  01  122222 2233333322211    11122345678889999999998776


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEE
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      ...+++++++++++.+.+++..||+++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         277 SRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             ceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            666899999999999999988999874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=98.34  E-value=2.4e-06  Score=59.55  Aligned_cols=102  Identities=18%  Similarity=0.143  Sum_probs=63.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-Cc--cccchHHHhhcceeeeeee------ecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-SE--GVHNLMQVVGKRIRMEGFL------AGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-~~--~~~~~~~~~~k~~~~~G~~------~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++++++++||++.+|..+..+... ..  .+. ...+......+..+.      +.. .....+.+.++++++.+|.
T Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~  317 (350)
T cd08248         240 EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGML-KSAVDLLKKNVKSLLKGSHYRWGF-FSPSGSALDELAKLVEDGK  317 (350)
T ss_pred             HHHHHHHhccCCEEEEecCCcccccccccccchhh-hhHHHHHHHHHHHHhcCCCeeEEE-ECCCHHHHHHHHHHHhCCC
Confidence            457889999999999999653221000 00  000 001111111111110      000 1113567889999999999


Q ss_pred             eeeeeeeecccchHHHHHHHhhcCCCcceEEEE
Q 033914           73 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVV  105 (109)
Q Consensus        73 l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~  105 (109)
                      +.+.+...++++++++||+.+.++...||++++
T Consensus       318 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         318 IKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             EecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            988766678999999999999988888999863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=98.25  E-value=6.7e-06  Score=57.53  Aligned_cols=48  Identities=19%  Similarity=0.243  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHcCceeeeeeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           59 KFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        59 ~~~~~~~~~~~~G~l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +.+.++++++.+|.+++....+++++++++||+.+++++..||+++++
T Consensus       305 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         305 DWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            467888999999999987666789999999999999999899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=98.16  E-value=2.9e-05  Score=55.11  Aligned_cols=96  Identities=11%  Similarity=0.070  Sum_probs=63.1

Q ss_pred             HHHHHhh-ccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eeee
Q 033914            3 DAVRLNM-RIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VEDI   79 (109)
Q Consensus         3 ~~~l~~l-~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~   79 (109)
                      ..++..+ +.+|+++.+|.....   .+ ..++.. .+.++.++.|++.+.+..  ++.+.++++++.++.+++  .+..
T Consensus       275 ~~~~~~~~~~~G~~v~~g~~~~~---~~-~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  347 (373)
T cd08299         275 KAALASCHEGYGVSVIVGVPPSS---QN-LSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITH  347 (373)
T ss_pred             HHHHHhhccCCCEEEEEccCCCC---ce-eecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheee
Confidence            3445544 579999999985431   01 122222 345778999998765431  245566777777776543  3556


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +++|+++.+||+.+.+++. .|+++.+
T Consensus       348 ~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         348 TLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             eecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            6899999999999887764 5888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.12  E-value=3.5e-05  Score=52.65  Aligned_cols=91  Identities=27%  Similarity=0.229  Sum_probs=59.9

Q ss_pred             hhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeecccchHH
Q 033914            8 NMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEGLEKAP   87 (109)
Q Consensus         8 ~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~l~~~~   87 (109)
                      .++++|+++.+|...... .....+.+.. ......++......  .  ..+.+.+++++++++++++....++++++++
T Consensus       229 ~l~~~g~~i~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  302 (319)
T cd08267         229 ALKPGGRYVSVGGGPSGL-LLVLLLLPLT-LGGGGRRLKFFLAK--P--NAEDLEQLAELVEEGKLKPVIDSVYPLEDAP  302 (319)
T ss_pred             ccCCCCEEEEeccccccc-cccccccchh-hccccceEEEEEec--C--CHHHHHHHHHHHHCCCeeeeeeeEEcHHHHH
Confidence            389999999999754321 0000000111 11222233333221  1  1567888999999999998777778999999


Q ss_pred             HHHHHhhcCCCcceEEE
Q 033914           88 SALVGIFTGQNVGKQLV  104 (109)
Q Consensus        88 ~A~~~l~~g~~~GKvvv  104 (109)
                      +|++.+.++...||+++
T Consensus       303 ~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         303 EAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHHhcCCCCCcEeC
Confidence            99999999888899874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.96  E-value=2.2e-05  Score=56.73  Aligned_cols=93  Identities=8%  Similarity=-0.020  Sum_probs=66.3

Q ss_pred             HHHH-HHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHH--HHHHHHHcCce-eeee
Q 033914            2 LDAV-RLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLE--LVMRAIKEGKL-VYVE   77 (109)
Q Consensus         2 ~~~~-l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~--~~~~~~~~G~l-~~~~   77 (109)
                      ++.. ++++++||+++.+|...        ..+++..+..+++++.|++....  .+  .+.  +.+.++++|++ +...
T Consensus       271 i~~~~l~~mk~GgilvnvG~~~--------~eId~~~L~~~el~i~g~~~~~~--~~--~~~~g~aI~LLa~Grlvnl~~  338 (413)
T cd00401         271 ITGEHFEQMKDGAIVCNIGHFD--------VEIDVKGLKENAVEVVNIKPQVD--RY--ELPDGRRIILLAEGRLVNLGC  338 (413)
T ss_pred             HHHHHHhcCCCCcEEEEeCCCC--------CccCHHHHHhhccEEEEccCCcc--eE--EcCCcchhhhhhCcCCCCCcc
Confidence            3444 88999999999999531        24677788899999999875321  11  233  57789999999 5543


Q ss_pred             eeec-------ccc-hHHHHHHHhhcCCC-cceEEEEe
Q 033914           78 DIAE-------GLE-KAPSALVGIFTGQN-VGKQLVVI  106 (109)
Q Consensus        78 ~~~~-------~l~-~~~~A~~~l~~g~~-~GKvvv~~  106 (109)
                      ..+|       +|+ ++.++++.+.+++. .-|+++.+
T Consensus       339 ~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         339 ATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             cCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            3344       588 99999999987654 35777655

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=97.90  E-value=5.8e-05  Score=52.08  Aligned_cols=60  Identities=20%  Similarity=0.358  Sum_probs=46.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G   71 (109)
                      ++.++++++++|+++.+|..++.    + ..+++..++.|++++.|+++++     +++++++++++++|
T Consensus       247 ~~~~~~~l~~~G~~v~~g~~~~~----~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         247 LEQALELLRKGGRIVQVGIFGPL----A-ASIDVERIIQKELSVIGSRSST-----PASWETALRLLASG  306 (306)
T ss_pred             HHHHHHHhhcCCEEEEEcccCCC----C-cccCHHHHhhcCcEEEEEecCc-----hHhHHHHHHHHhcC
Confidence            45678899999999999986631    1 2356677889999999999764     45688899999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=96.97  E-value=0.0045  Score=42.19  Aligned_cols=90  Identities=11%  Similarity=0.048  Sum_probs=51.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHc-Ccee--eeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKE-GKLV--YVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-G~l~--~~~~   78 (109)
                      ++.+.++|++||++++.+.....       +.  ...+.+...+.+.......     ...++.+++++ |-..  ....
T Consensus       166 l~~~~r~LkpGG~l~i~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~-----~~~e~~~~l~~aGf~~v~i~~~  231 (272)
T PRK11873        166 FKEAFRVLKPGGRFAISDVVLRG-------EL--PEEIRNDAELYAGCVAGAL-----QEEEYLAMLAEAGFVDITIQPK  231 (272)
T ss_pred             HHHHHHHcCCCcEEEEEEeeccC-------CC--CHHHHHhHHHHhccccCCC-----CHHHHHHHHHHCCCCceEEEec
Confidence            56788999999999998865431       11  1223333333322211111     13345556665 4222  2233


Q ss_pred             eecccchHHHHHHHh--hcCCCcceEEEE
Q 033914           79 IAEGLEKAPSALVGI--FTGQNVGKQLVV  105 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l--~~g~~~GKvvv~  105 (109)
                      ..++++++.++++.+  .+++..++.+..
T Consensus       232 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        232 REYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             cceecccHHHHHHHhccccccccCceEEE
Confidence            346899999999999  666666665543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.63  E-value=0.057  Score=35.80  Aligned_cols=56  Identities=23%  Similarity=0.228  Sum_probs=38.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHH
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRA   67 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~   67 (109)
                      ++.++++++++|+++.+|......   .  .......+.+++++.|+..+.+     +.+++++++
T Consensus       215 ~~~~~~~l~~~G~~v~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  270 (271)
T cd05188         215 LAQALRLLRPGGRIVVVGGTSGGP---P--LDDLRRLLFKELTIIGSTGGTR-----EDFEEALDL  270 (271)
T ss_pred             HHHHHHhcccCCEEEEEccCCCCC---C--cccHHHHHhcceEEEEeecCCH-----HHHHHHHhh
Confidence            356788999999999999865431   1  1124467889999999986542     345555554

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=94.72  E-value=0.086  Score=39.48  Aligned_cols=71  Identities=11%  Similarity=0.005  Sum_probs=47.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhh-cceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVG-KRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~-k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      .+++++.+++||+|+.+|...+.+.+   ...+...++. +++++.|++  +++..   ...+..+++.+|.+++....+
T Consensus       268 t~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~--n~P~~---~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        268 TAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYT--DLPSR---LPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeC--CCchh---HHHHHHHHHHhCCccHHHHhc
Confidence            48899999999999999985432211   1222334555 899999986  33322   223478899999887665444

>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]

Probab=84.46  E-value=0.99  Score=31.79  Aligned_cols=22  Identities=32%  Similarity=0.321  Sum_probs=19.6

Q ss_pred             HHHHHHhhccCCeEEEEccccc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQ   23 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~   23 (109)
                      +++++++|++|||++++-.+|=
T Consensus       227 L~~a~~~L~~gGRl~VIsFHSL  248 (314)
T COG0275         227 LEAALDLLKPGGRLAVISFHSL  248 (314)
T ss_pred             HHHHHHhhCCCcEEEEEEecch
Confidence            6788999999999999998774

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=80.50  E-value=0.53  Score=33.98  Aligned_cols=46  Identities=7%  Similarity=-0.145  Sum_probs=30.2

Q ss_pred             HHHHHHHHHH---cCceeeeeeeecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           60 FLELVMRAIK---EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        60 ~~~~~~~~~~---~G~l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ...++++.+.   .||+-......++|+++.++++.++...  ||+|+..+
T Consensus       348 ~~~~A~~~~~~~~~gKvvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  396 (410)
T cd08238         348 AAAETTLNLPGIPGGKKLIYTQKPLPLTGIEELADKEPEEP--AAIVLENG  396 (410)
T ss_pred             HHHHHHHHhhccCCceEEEECCCCCCCchhHhhHhhcCCCh--HHHHHhcC
Confidence            3444444544   2333333344579999999999998776  88887653

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR00006 S-adenosyl-methyltransferase MraW

Probab=80.31  E-value=1.8  Score=30.48  Aligned_cols=22  Identities=18%  Similarity=0.184  Sum_probs=19.4

Q ss_pred             HHHHHHhhccCCeEEEEccccc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQ   23 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~   23 (109)
                      ++++.++|++|||++++-.+|-
T Consensus       223 L~~~~~~L~~gGrl~VISfHSL  244 (305)
T TIGR00006       223 LQFAPNLLAPGGRLSIISFHSL  244 (305)
T ss_pred             HHHHHHHhcCCCEEEEEecCcH
Confidence            5778899999999999998774

Genetics paper in 1972 links mra cluster to peptidoglycan biosynthesis in E. coli. Seems to be common in proteobacteria.wn.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	109
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		6e-42
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		4e-40
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		2e-15
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		5e-10
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		5e-10
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		1e-09
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		2e-07
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		2e-07
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		3e-06
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		3e-06

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  165 bits (417), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 96/109 (88%)
Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NM++ GRIAVCGMISQYNLE++EGVHNL  ++ KRIRMEGFL  D+YH YPK+
Sbjct: 235 MLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKY 294
Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE+V+  IK GK+VYVED+A GLE AP+ALVG+F+G+N+GKQ+V+++RE
Sbjct: 295 LEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  159 bits (402), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/109 (66%), Positives = 90/109 (82%)
Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NM + GRIAVCGMISQYNLE  EGVHNL  ++ KR R++GF+  DFY +Y KF
Sbjct: 237 MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKF 296
Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE V+  I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+ARE
Sbjct: 297 LEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 1   MLDAVRLNMRIRGRIAVCGMISQYN-LEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPK 59
           +LD V   +  + RI +CG ISQYN  E   G  N + ++  R RMEG +  D+  ++P+
Sbjct: 230 ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPE 289
Query: 60  FLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGK 101
            L+ +   + EGKL   EDI EGLE  P  L+ +F+G+N GK
Sbjct: 290 GLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGK 331

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 9   MRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLA----GDFYHQYPKFLEL 63
           M+  GRIA+CG IS YN           ++V  + +RME F+     GD      K L+ 
Sbjct: 250 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKD 306
Query: 64  VMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           +++ + EGK+ Y E I EG E  P+A +G+  G N+GK +V
Sbjct: 307 LLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 9   MRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLA----GDFYHQYPKFLEL 63
           M+  GRIA+CG IS YN           ++V  + +RME F+     GD      K L+ 
Sbjct: 229 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKD 285
Query: 64  VMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           +++ + EGK+ Y E I EG E  P+A +G+  G N+GK +V
Sbjct: 286 LLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 2   LDAVRLNMRIRGRIAVCGMISQYN-LEKSEGVHNLMQVVGKRIRMEGFLA----GDFYHQ 56
           L+ V   M+  G+IA+CG IS YN +++     +   ++ K++R+EGF+     GD    
Sbjct: 227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVRE- 285
Query: 57  YPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
             K L  +M+ + EGK+ Y E + +G E  P+A + +  G N+GK +V
Sbjct: 286 --KALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEK------SEGVHNLMQVVGKRIRMEGFLAGDFYHQ 56
           D V   M     I +CG ISQYN +       S  +  + +   + I  E FL  ++  +
Sbjct: 244 DTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--ERNITRERFLVLNYKDK 301
Query: 57  Y-PKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           + P  L+L  +  KEGKL   E +  GLE   +A   + TG N+GKQ+V I+ E
Sbjct: 302 FEPGILQL-SQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEK------SEGVHNLMQVVGKRIRMEGFLAGDFYHQ 56
           D V   M     I +CG ISQYN +       S  +  + +   + I  E FL  ++  +
Sbjct: 239 DTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--ERNITRERFLVLNYKDK 296
Query: 57  Y-PKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           + P  L+L  +  KEGKL   E +  GLE   +A   + TG N+GKQ+V I+ E
Sbjct: 297 FEPGILQL-SQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 15  IAVCGMISQYNLEKSEGVHNLMQVVGKR----IRMEGFLAGDFYHQY-PKFLELVMRAIK 69
           I +CG ISQYN +          V   R    I  E F   ++  ++ P  L+L  +  K
Sbjct: 262 IILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQL-SQWFK 320
Query: 70  EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           EGKL   E +A+GLE    A     TG NVGKQ+V I+ +
Sbjct: 321 EGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKR----IRMEGFLAGDFYHQY- 57
           +AV   M     I +CG ISQY+ +          V   R    I  E F   ++  ++ 
Sbjct: 240 NAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFE 299
Query: 58  PKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           P  L+L  +  KEGKL   E +A+GLE    A   + TG NVGKQ+V I+ +
Sbjct: 300 PGILQL-SQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	109
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	4e-55
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	8e-47
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	2e-46
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	4e-28
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-04
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  173 bits (441), Expect = 4e-55
 Identities = 73/109 (66%), Positives = 90/109 (82%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF 60
           MLDAV +NM + GRIAVCGMISQYNLE  EGVHNL  ++ KR R++GF+  DFY +Y KF
Sbjct: 237 MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKF 296

Query: 61  LELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           LE V+  I+EGK+ YVED+A+GLEKAP ALVG+F G+NVGKQ+VV+ARE
Sbjct: 297 LEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  151 bits (385), Expect = 8e-47
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 2/106 (1%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNL-EKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYP 58
            L+ V   M+  G+IA+CG IS YN  ++     +   ++ K++R+EGF+   +      
Sbjct: 226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVRE 285

Query: 59  KFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 104
           K L  +M+ + EGK+ Y E + +G E  P+A + +  G N+GK +V
Sbjct: 286 KALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  151 bits (383), Expect = 2e-46
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGV----HNLMQVVGKRIRMEGFLAGDFYHQ 56
           + D V   M     I +CG ISQYN +                 + I  E FL  ++  +
Sbjct: 242 ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDK 301

Query: 57  YPKFLELVMRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE 109
           +   +  + +  KEGKL   E +  GLE   +A   + TG N+GKQ+V I+ E
Sbjct: 302 FEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  103 bits (259), Expect = 4e-28
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYN----LEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQ 56
           M D     +  +GR+ V G IS Y     L   +      +++ K   ++GF    +  +
Sbjct: 243 MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSK 302

Query: 57  YPKFLELVMRAIKEGKLVYVEDIA--------EGLEKAPSALVGIFTGQNVGKQLVVIA 107
           Y   +  ++     G LV   D+          GLE    A+  ++ G+N GK +V + 
Sbjct: 303 YQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 12/98 (12%)

Query: 9   MRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAI 68
            R  G I  C   S Y  E      +   +     R+ G    ++            R I
Sbjct: 334 TRKGGTITTCASTSGYMHEY-----DNRYLWMSLKRIIGSHFANYRE-----AWEANRLI 383

Query: 69  KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVI 106
            +G++         LE    A   +    + GK  V +
Sbjct: 384 AKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGK--VGV 419

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 10/99 (10%)

Query: 9   MRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAI 68
               GRIA+ G  S Y             V  +++ + G             L  ++R +
Sbjct: 255 TANGGRIAIAGASSGYEGTL-----PFAHVFYRQLSILGSTMAS-----KSRLFPILRFV 304

Query: 69  KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA 107
           +EGKL  V      LE A      +   +  GK ++ + 
Sbjct: 305 EEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	109
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.71
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.7
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.69
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.68
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.68
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.65
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.62
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.62
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.61
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.61
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.6
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.6
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.6
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.59
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.59
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.59
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.58
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.58
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.58
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.58
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.57
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.57
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.57
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.56
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.56
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.55
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.55
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.55
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.55
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.55
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.54
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.54
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.54
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.53
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.53
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.53
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.51
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.51
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.51
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.51
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.5
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.5
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.5
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.49
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.49
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.49
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.48
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.46
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.45
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.44
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.44
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.43
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.43
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.42
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.42
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.42
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.41
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.4
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.4
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.4
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.4
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.4
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.39
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.37
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.34
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.33
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.27
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.24
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.03
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.99
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	85.83
1wg8_A	285	Predicted S-adenosylmethionine-dependent methyltra	81.1
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	80.51

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.71  E-value=3.9e-17  Score=112.83  Aligned_cols=108  Identities=67%  Similarity=1.126  Sum_probs=87.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++||++.+|..++++.......+++..++.|++++.|++.+.+.+.+++.+.++++++++|++++.+..++
T Consensus       238 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  317 (345)
T 2j3h_A          238 LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD  317 (345)
T ss_dssp             HHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccC
Confidence            46788999999999999987653211111234556788999999998766554455677999999999999998887778


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      ||+++++||+.+++++..||+|+.+++|
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          318 GLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             SGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             CHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            9999999999999999999999998764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.70  E-value=5.2e-17  Score=111.92  Aligned_cols=105  Identities=38%  Similarity=0.662  Sum_probs=87.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-CccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-SEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      ++.++++++++||++.+|..++++... +..++++..++.|++++.|++.+.+...+++.++++++++++|++++.+..+
T Consensus       231 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  310 (336)
T 4b7c_A          231 LDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIV  310 (336)
T ss_dssp             HHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             HHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeee
Confidence            567889999999999999877542111 1124566778999999999988776556678899999999999999999888


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +||+++++||+.+++++..||+|+++
T Consensus       311 ~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          311 EGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             ECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999999999999999974

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.69  E-value=4.1e-17  Score=112.68  Aligned_cols=102  Identities=16%  Similarity=0.072  Sum_probs=81.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +++++++++++|+++++|..++.   ......++..++.|++++.|++.+.......+.++++++|+++|++++.  ++.
T Consensus       243 ~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~  319 (346)
T 4a2c_A          243 VELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAH  319 (346)
T ss_dssp             HHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEE
T ss_pred             hhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeE
Confidence            57889999999999999987652   1112345567889999999987643333334678999999999998654  666


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++|||++++||+.|++++..||+||+|
T Consensus       320 ~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          320 RGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             EECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             EEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            789999999999999999999999965

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.68  E-value=1e-16  Score=110.39  Aligned_cols=102  Identities=14%  Similarity=0.130  Sum_probs=85.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      ++.++++++++||++.+|..++.     ..+++...++.|++++.|++.+.+.   +.+.+.++++++++++|++++.+.
T Consensus       230 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~  304 (334)
T 3qwb_A          230 FEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIY  304 (334)
T ss_dssp             HHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred             HHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCcee
Confidence            57889999999999999986652     1245566788999999998766553   234556789999999999999988


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      .++||+++++||+.+++++..||+|+++++
T Consensus       305 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          305 KTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             EEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             eEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            889999999999999999999999999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.68  E-value=1.3e-16  Score=110.30  Aligned_cols=95  Identities=15%  Similarity=0.189  Sum_probs=80.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++++|.....      ..+++..++.|++++.|++.++     ++++.++++|+++|+|+|.+. ++
T Consensus       246 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~gs~~~~-----~~~~~~~~~l~~~g~i~p~~~-~~  313 (348)
T 4eez_A          246 FEQAVASLKPMGKMVAVAVPNTE------MTLSVPTVVFDGVEVAGSLVGT-----RLDLAEAFQFGAEGKVKPIVA-TR  313 (348)
T ss_dssp             HHHHHHTEEEEEEEEECCCCSCE------EEECHHHHHHSCCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCEE-EE
T ss_pred             hheeheeecCCceEEEEeccCCC------CccCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHcCCCEEEEE-EE
Confidence            57889999999999999975542      2466778999999999998654     456889999999999998764 68


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      |||++++||+.|++|+..||+||+++.
T Consensus       314 ~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          314 KLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             CGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             eHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            999999999999999999999998753

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.66  E-value=6.6e-16  Score=107.21  Aligned_cols=107  Identities=31%  Similarity=0.406  Sum_probs=84.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccc----hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHN----LMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~----~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++||++.+|..+++....+..+..    ...++.|++++.|++.+.+.....+.+.++++++++|++++.+
T Consensus       243 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  322 (357)
T 2zb4_A          243 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKE  322 (357)
T ss_dssp             HHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCE
T ss_pred             HHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCcc
Confidence            567899999999999999876532111100000    2467889999999986555444567899999999999999988


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ..++||+++++||+.+.+++..||+|+++++
T Consensus       323 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          323 TVINGLENMGAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             ceecCHHHHHHHHHHHHcCCCCceEEEEEec
Confidence            8889999999999999999889999999865

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.65  E-value=5e-16  Score=106.90  Aligned_cols=105  Identities=32%  Similarity=0.542  Sum_probs=82.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-CccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-SEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      +++++++++++||++.+|..++++... +....++..++.|++++.|++.+.+. ..+++.++++++++++|++++.+..
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  306 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHV  306 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccc
Confidence            467889999999999999876532100 11112556788999999998765543 3456788999999999999998888


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++||+++++||+.+++++..||+|+++
T Consensus       307 ~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          307 TKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             EECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            899999999999999998899999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.62  E-value=4.6e-16  Score=107.84  Aligned_cols=108  Identities=16%  Similarity=0.133  Sum_probs=78.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCC-----------ccccchHHHhhcceeeeeeeecccc------cchHHHHHHH
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKS-----------EGVHNLMQVVGKRIRMEGFLAGDFY------HQYPKFLELV   64 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~-----------~~~~~~~~~~~k~~~~~G~~~~~~~------~~~~~~~~~~   64 (109)
                      +++++++++++||++++|..+.......           ...++...++.+++++.|++...+.      ...++.++++
T Consensus       221 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  300 (349)
T 4a27_A          221 TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKL  300 (349)
T ss_dssp             ----CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHH
Confidence            3567889999999999998653211100           0124566788899999999864432      1236789999


Q ss_pred             HHHHHcCceeeeeeeecccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           65 MRAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        65 ~~~~~~G~l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      ++++++|+|++.++.++||+++++||+.+++++..||+|++++++
T Consensus       301 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          301 IGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             HHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            999999999999988899999999999999999999999998653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.62  E-value=1.4e-15  Score=105.27  Aligned_cols=97  Identities=11%  Similarity=0.057  Sum_probs=81.5

Q ss_pred             HHHHHHhhccCCeEEEEcccc-ccCCCCCccccchHHHh-hcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMIS-QYNLEKSEGVHNLMQVV-GKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~-~~~~~~~~~~~~~~~~~-~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      +++++++++++||++.+|..+ +.     ...++...++ .|++++.|++.+.     ++.+.++++++++|++++.+ .
T Consensus       248 ~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~  316 (348)
T 3two_A          248 LKDYLKLLTYNGDLALVGLPPVEV-----APVLSVFDFIHLGNRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-D  316 (348)
T ss_dssp             HHHHHTTEEEEEEEEECCCCCGGG-----CCEEEHHHHHHTCSCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-E
T ss_pred             HHHHHHHHhcCCEEEEECCCCCCC-----cccCCHHHHHhhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-E
Confidence            678999999999999999866 31     1125666777 9999999998654     35688999999999999976 4


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEeecC
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIARE  109 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~~~  109 (109)
                      ++||+++++||+.+++++..||+|++++++
T Consensus       317 ~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          317 LILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             EECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             EEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            789999999999999999999999998764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.61  E-value=2.6e-15  Score=103.65  Aligned_cols=95  Identities=18%  Similarity=0.196  Sum_probs=80.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++||++.+|..++.      .+++...++.|++++.|++.+.     ++.++++++++++|++++.+. ++
T Consensus       246 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~-~~  313 (340)
T 3s2e_A          246 FSQAIGMVRRGGTIALNGLPPGD------FGTPIFDVVLKGITIRGSIVGT-----RSDLQESLDFAAHGDVKATVS-TA  313 (340)
T ss_dssp             HHHHHHHEEEEEEEEECSCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCEE-EE
T ss_pred             HHHHHHHhccCCEEEEeCCCCCC------CCCCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceEE-EE
Confidence            57889999999999999986541      2456677889999999997653     467889999999999999765 46


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+++++..||+||++++
T Consensus       314 ~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          314 KLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             CGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999999999999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.61  E-value=3.9e-16  Score=107.01  Aligned_cols=100  Identities=20%  Similarity=0.260  Sum_probs=83.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|..++.     ..+++...++.|++++.|++...+. +...+.++++++++++|++++. ..+
T Consensus       224 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~  297 (324)
T 3nx4_A          224 LAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATE  297 (324)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEE
T ss_pred             HHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-cee
Confidence            57899999999999999986652     1245667788999999999764432 2345678999999999999987 777


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEee
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +||+++++||+.++++++.||+|++++
T Consensus       298 ~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          298 ITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             EEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            899999999999999999999999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.60  E-value=1.7e-15  Score=105.19  Aligned_cols=101  Identities=16%  Similarity=0.181  Sum_probs=82.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccc-----hHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQ-----YPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~-----~~~~~~~~~~~~~~G~l~~~   76 (109)
                      ++.++++++++|+++.+|..++..    ...+++..++.|++++.|++.+.+...     ..+.++++++++++|++++.
T Consensus       248 ~~~~~~~l~~~G~iv~~g~~~~~~----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  323 (353)
T 4dup_A          248 FERNIASLAKDGCLSIIAFLGGAV----AEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPV  323 (353)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCSE----EEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCC
T ss_pred             HHHHHHHhccCCEEEEEEecCCCc----ccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCC
Confidence            578899999999999999876531    112567788999999999987655421     12237789999999999999


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +..++||+++++||+.+++++..||+|+++
T Consensus       324 i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          324 IHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             EEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             cceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            988899999999999999999999999974

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.60  E-value=2.2e-15  Score=103.74  Aligned_cols=102  Identities=17%  Similarity=0.056  Sum_probs=82.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchH-HHhhcc--eeeeeeeeccc--ccchHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLM-QVVGKR--IRMEGFLAGDF--YHQYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~-~~~~k~--~~~~G~~~~~~--~~~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      ++.++++++++|+++.+|..++.     ...+++. .++.|+  +++.|++...+  ...+.+.++++++++++|++++.
T Consensus       227 ~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  301 (333)
T 1wly_A          227 LQKSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS  301 (333)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred             HHHHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCC
Confidence            57889999999999999986642     1135555 678899  99999865221  12234578999999999999998


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +..++||+++++||+.+++++..||+|+++++
T Consensus       302 i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          302 VAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             EEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             cceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            88889999999999999999889999998753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.60  E-value=2.3e-15  Score=104.87  Aligned_cols=94  Identities=23%  Similarity=0.289  Sum_probs=81.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|..++.     ...+++..++.|++++.|++.+.     ++.++++++++++|++++.+..++
T Consensus       270 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~  339 (363)
T 3uog_A          270 LGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-----RRALEDLVGAVDRLGLKPVIDMRY  339 (363)
T ss_dssp             HHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC-----HHHHHHHHHHHHHHTCCCCEEEEE
T ss_pred             HHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC-----HHHHHHHHHHHHcCCCccceeeEE
Confidence            57899999999999999986652     12456677899999999998653     467889999999999999988889


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ||+++++||+.+++++ .||+||++
T Consensus       340 ~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          340 KFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             EGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cHHHHHHHHHHHHcCC-CccEEEeC
Confidence            9999999999999998 99999974

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.59  E-value=3.6e-15  Score=103.65  Aligned_cols=99  Identities=16%  Similarity=0.233  Sum_probs=79.9

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-----cchHHHHHHHHHHHHcCceeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      .+++++++++||++.+|..++.    + ..++...++.|++++.|++.+.+.     ..+.+.++++++++++|++++.+
T Consensus       254 ~~~~~~l~~~G~iv~~G~~~~~----~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  328 (357)
T 1zsy_A          254 TELLRQLARGGTMVTYGGMAKQ----P-VVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPA  328 (357)
T ss_dssp             HHHHTTSCTTCEEEECCCCTTC----C-BCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHhhCCCCEEEEEecCCCC----C-CCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCcc
Confidence            4578899999999999975542    1 235566788899999999765431     12345688999999999999988


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..++||+++++||+.+++++..||+|+++
T Consensus       329 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          329 CSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             EEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             ceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            77899999999999999998899999974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.59  E-value=1.2e-15  Score=103.72  Aligned_cols=99  Identities=13%  Similarity=0.126  Sum_probs=77.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHH---HHHcCceeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMR---AIKEGKLVYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~---~~~~G~l~~~~~   78 (109)
                      ++.++++++++||++.+|..++..     ..+++..++.|++++.|++.+.+ ...++.++++++   ++++|++++.+.
T Consensus       201 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~  274 (302)
T 1iz0_A          201 VEESLGLLAHGGRLVYIGAAEGEV-----APIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVG  274 (302)
T ss_dssp             HHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEE
T ss_pred             HHHHHHhhccCCEEEEEeCCCCCC-----CCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccc
Confidence            578899999999999999866421     13455678899999999976433 223567889999   999999999888


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++..||+|+++
T Consensus       275 ~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          275 PVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             EEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             eEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8899999999999999988899999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.59  E-value=1.1e-14  Score=101.43  Aligned_cols=106  Identities=25%  Similarity=0.409  Sum_probs=83.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC---Cc--cccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK---SE--GVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~---~~--~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      ++.++++++++||++.+|..+++..+.   +.  ..+ ...++.|++++.|++...+....++.+.++++++++|++++.
T Consensus       244 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  322 (362)
T 2c0c_A          244 FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE  322 (362)
T ss_dssp             HHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCC
T ss_pred             HHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEee
Confidence            567899999999999999876532100   00  012 246788999999998765544456789999999999999987


Q ss_pred             ee--------eecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           77 ED--------IAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        77 ~~--------~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +.        .++||+++++||+.+++++..||+|+++++
T Consensus       323 ~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          323 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             EECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             eccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            65        346999999999999999889999998764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.58  E-value=1.8e-15  Score=104.61  Aligned_cols=99  Identities=17%  Similarity=0.193  Sum_probs=77.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc----cchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++|+++.+|..++.     ...+++..++.|++++.|++.+.+.    +...+.+.++++++++| +++.+
T Consensus       240 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i  313 (342)
T 4eye_A          240 FDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPV  313 (342)
T ss_dssp             HHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCE
T ss_pred             HHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCc
Confidence            57889999999999999986642     1134455678899999999875542    22346789999999999 99999


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..++||+++++||+.+.+++..||+|+++
T Consensus       314 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          314 SARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             EEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            88899999999999999999999999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.58  E-value=5.3e-15  Score=105.79  Aligned_cols=97  Identities=19%  Similarity=0.126  Sum_probs=81.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|..+++     ...++...++.+++++.|++.+.+     +.+.++++++++|+|++.+..++
T Consensus       327 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l~~~g~l~~~i~~~~  396 (456)
T 3krt_A          327 FGASVFVTRKGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFANY-----REAWEANRLIAKGRIHPTLSKVY  396 (456)
T ss_dssp             HHHHHHHEEEEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCCH-----HHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHhhCCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCCH-----HHHHHHHHHHHcCCcccceeEEE
Confidence            57889999999999999987653     124567788899999999986543     34557899999999999888889


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+.+++..||+||.+.+
T Consensus       397 ~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          397 SLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             cHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            999999999999999999999998743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.58  E-value=1e-14  Score=103.94  Aligned_cols=97  Identities=20%  Similarity=0.175  Sum_probs=81.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..++.     ...++...++.+++++.|++.+.     .+.+.++++++++|++++.+..++
T Consensus       319 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~  388 (447)
T 4a0s_A          319 FGLSVIVARRGGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVY  388 (447)
T ss_dssp             HHHHHHHSCTTCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHHhcCCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEE
Confidence            46789999999999999986652     12456677889999999987654     235668999999999999888889


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+.+++..||+||.+.+
T Consensus       389 ~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          389 PLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             cHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            999999999999999999999998743

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.58  E-value=2.9e-15  Score=102.90  Aligned_cols=100  Identities=15%  Similarity=0.121  Sum_probs=80.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhc-ceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGK-RIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k-~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++||++.+|..++.     ...+++..+..+ ++++.++.++.+.   +.+.+.++++++++++|++++.+
T Consensus       222 ~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i  296 (325)
T 3jyn_A          222 WLTSLDSVAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDG  296 (325)
T ss_dssp             HHHHHTTEEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHhcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCcc
Confidence            56889999999999999986652     123556667777 6788776544332   34556778999999999999998


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ..++||+++++||+.+++++..||+|+.+
T Consensus       297 ~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          297 IEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88899999999999999999999999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.57  E-value=6.7e-15  Score=101.72  Aligned_cols=95  Identities=25%  Similarity=0.281  Sum_probs=79.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++||++.+|..++.     ...+++..++.|++++.|++...     ++.+.++++++++|++++.+..++
T Consensus       248 ~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~  317 (343)
T 2eih_A          248 FEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVGQVL  317 (343)
T ss_dssp             HHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GGGHHHHHHHHHHTSSCCCEEEEE
T ss_pred             HHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HHHHHHHHHHHHcCCCCCceeEEe
Confidence            57889999999999999986642     11355667889999999986432     346788999999999999888889


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ||+++++||+.+++++..||+|+++
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          318 PLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEec
Confidence            9999999999999998899999976

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.57  E-value=5e-15  Score=102.48  Aligned_cols=94  Identities=18%  Similarity=0.218  Sum_probs=78.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++||++.+|..+..    +  .+++..++.|++++.|++.+.     ++.++++++++++|++++.++.++
T Consensus       254 ~~~~~~~l~~~G~iv~~g~~~~~----~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~  322 (347)
T 1jvb_A          254 LSVYPKALAKQGKYVMVGLFGAD----L--HYHAPLITLSEIQFVGSLVGN-----QSDFLGIMRLAEAGKVKPMITKTM  322 (347)
T ss_dssp             HTTGGGGEEEEEEEEECCSSCCC----C--CCCHHHHHHHTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred             HHHHHHHHhcCCEEEEECCCCCC----C--CCCHHHHHhCceEEEEEeccC-----HHHHHHHHHHHHcCCCCceEEEEE
Confidence            45678899999999999986521    1  355667889999999987543     457889999999999999887789


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ||+++++||+.+++++..||+|+++
T Consensus       323 ~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          323 KLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             EGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cHHHHHHHHHHHHCCCCcceEEecC
Confidence            9999999999999998899999974

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.57  E-value=3.7e-15  Score=103.08  Aligned_cols=93  Identities=19%  Similarity=0.156  Sum_probs=63.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++|+++.+|..++.      ..+++..++.|++++.|++.+.     ++.++++++++++|++++.+ .++
T Consensus       252 ~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~  319 (344)
T 2h6e_A          252 TYNLGKLLAQEGAIILVGMEGKR------VSLEAFDTAVWNKKLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKV  319 (344)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEE
T ss_pred             HHHHHHHhhcCCEEEEeCCCCCC------cccCHHHHhhCCcEEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEE
Confidence            56789999999999999985531      1356667889999999987542     45788999999999999988 789


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ||+++++||+.+++++..||+|+++
T Consensus       320 ~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          320 PLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             CC----------------CEEEECC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9999999999999998899999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.56  E-value=1.1e-14  Score=100.64  Aligned_cols=95  Identities=19%  Similarity=0.261  Sum_probs=79.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++||++.+|..++.      .++++..++.|++++.|++.+.     ++.+.++++++++|++++.+ .++
T Consensus       244 ~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~  311 (339)
T 1rjw_A          244 FQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT-----RKDLQEALQFAAEGKVKTII-EVQ  311 (339)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEE
T ss_pred             HHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEeccCC-----HHHHHHHHHHHHcCCCCccE-EEE
Confidence            46789999999999999986541      2456667888999999987543     45688999999999999875 468


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+++++..||+|+++++
T Consensus       312 ~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          312 PLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             cHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999889999999865

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.56  E-value=8.5e-15  Score=101.38  Aligned_cols=99  Identities=13%  Similarity=0.067  Sum_probs=78.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-------cchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-------HQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++||++.+|...        .++++..+..|++++.|++.....       ....+.++++++++++|+|+
T Consensus       231 ~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  302 (346)
T 3fbg_A          231 YDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ  302 (346)
T ss_dssp             HHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE
Confidence            477899999999999988422        134556678899999997654321       12356789999999999999


Q ss_pred             eeeeeec---ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           75 YVEDIAE---GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        75 ~~~~~~~---~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +.+..++   ||+++++||+.++++++.||+|+++.+
T Consensus       303 ~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          303 PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             CCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            9887666   999999999999999999999999854

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.55  E-value=9e-15  Score=101.22  Aligned_cols=95  Identities=20%  Similarity=0.241  Sum_probs=78.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      ++.++++++++||++.+|..++.     ..++++..++.|++++.|++.+.     ++.+.++++++++|++++.+. ++
T Consensus       252 ~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~-~~  320 (347)
T 2hcy_A          252 IEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISIVGSYVGN-----RADTREALDFFARGLVKSPIK-VV  320 (347)
T ss_dssp             HHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHTTSCCCCEE-EE
T ss_pred             HHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEEEEccCCC-----HHHHHHHHHHHHhCCCccceE-EE
Confidence            46778899999999999986532     12456667889999999987543     356888999999999998754 68


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ||+++++||+.+++++..||+|++++
T Consensus       321 ~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          321 GLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             cHHHHHHHHHHHHcCCcceeEEEecC
Confidence            99999999999999988999999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.55  E-value=9.9e-15  Score=101.46  Aligned_cols=95  Identities=15%  Similarity=0.156  Sum_probs=78.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++||++.+|..++.     ...++.. ++.|++++.|++.+.     ++.+.++++++++|++++.+. ++
T Consensus       258 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~-~~  325 (357)
T 2cf5_A          258 LEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LMLGRKVITGSFIGS-----MKETEEMLEFCKEKGLSSIIE-VV  325 (357)
T ss_dssp             SHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHHHTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCEE-EE
T ss_pred             HHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHhCccEEEEEccCC-----HHHHHHHHHHHHcCCCCCceE-EE
Confidence            57889999999999999986542     1124455 888999999987543     456889999999999998774 78


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+++++..||+|+++++
T Consensus       326 ~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          326 KMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             eHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            999999999999999989999998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.55  E-value=1e-14  Score=101.91  Aligned_cols=96  Identities=13%  Similarity=0.123  Sum_probs=77.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|..++.     ...++...++.|++++.|++.+.     ++.+.++++++++|++++.+. ++
T Consensus       271 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~  339 (369)
T 1uuf_A          271 LDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MI  339 (369)
T ss_dssp             HHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EE
T ss_pred             HHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHhCCcEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EE
Confidence            57889999999999999986541     11355667889999999987543     356888999999999998876 58


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+++++..||+|+++++
T Consensus       340 ~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          340 RADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             CGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             cHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999889999998754

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.55  E-value=6.9e-15  Score=101.67  Aligned_cols=93  Identities=18%  Similarity=0.203  Sum_probs=78.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++||++.+|..++..     .++++ .++.|++++.|++.+.     ++.+.++++++++|++++.. .++
T Consensus       253 ~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~-~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~  320 (345)
T 3jv7_A          253 IDTAQQVVAVDGHISVVGIHAGAH-----AKVGF-FMIPFGASVVTPYWGT-----RSELMEVVALARAGRLDIHT-ETF  320 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSCCTTCC-----EEEST-TTSCTTCEEECCCSCC-----HHHHHHHHHHHHTTCCCCCE-EEE
T ss_pred             HHHHHHHHhcCCEEEEECCCCCCC-----CCcCH-HHHhCCCEEEEEecCC-----HHHHHHHHHHHHcCCCceEE-EEE
Confidence            578899999999999999866521     23444 6789999999997653     46788999999999999854 578


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEe
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ||+++++||+.+++++..||+||++
T Consensus       321 ~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          321 TLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             cHHHHHHHHHHHHcCCCceeEEeCC
Confidence            9999999999999999999999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.55  E-value=9.9e-15  Score=101.35  Aligned_cols=102  Identities=17%  Similarity=0.170  Sum_probs=79.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchH-----HHHHHHHHHHHcC---c
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYP-----KFLELVMRAIKEG---K   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~G---~   72 (109)
                      ++.++++++++|+++.+|..++.     ...+++ ..++.|++++.|++.+.+...+.     +..+++++++++|   +
T Consensus       244 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  318 (354)
T 2j8z_A          244 WEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR  318 (354)
T ss_dssp             HHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CC
T ss_pred             HHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCcc
Confidence            56789999999999999986642     123556 67889999999997654332221     2235688999999   9


Q ss_pred             eeeeeeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           73 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        73 l~~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +++.+..++||+++++||+.+++++..||+|+++++
T Consensus       319 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          319 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             CCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             ccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            998888889999999999999998889999998753

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.54  E-value=1.4e-14  Score=100.68  Aligned_cols=95  Identities=13%  Similarity=0.033  Sum_probs=77.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      +++++++++++||++.+|...+.      ..+++..++.|++++.|++.+      ++.+.++++++++|+++  +.++.
T Consensus       266 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~  333 (363)
T 3m6i_A          266 IAAAIWAVKFGGKVFVIGVGKNE------IQIPFMRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTH  333 (363)
T ss_dssp             HHHHHHHSCTTCEEEECCCCCSC------CCCCHHHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEE
T ss_pred             HHHHHHHhcCCCEEEEEccCCCC------ccccHHHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceee
Confidence            57889999999999999985532      235677889999999998753      23577888899999995  44667


Q ss_pred             ecccchHHHHHHHhhcC-CCcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTG-QNVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g-~~~GKvvv~~~~  108 (109)
                      ++||+++++||+.++++ ...||+|+++++
T Consensus       334 ~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          334 RFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             EEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             eeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            78999999999999998 678999998864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.54  E-value=1.2e-14  Score=101.33  Aligned_cols=95  Identities=8%  Similarity=0.002  Sum_probs=79.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|..++.      ..++...++.|++++.|++.+.     .+.+.++++++++|++++.+ .++
T Consensus       265 ~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~  332 (366)
T 1yqd_A          265 LLPLFGLLKSHGKLILVGAPEKP------LELPAFSLIAGRKIVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVI  332 (366)
T ss_dssp             SHHHHHHEEEEEEEEECCCCSSC------EEECHHHHHTTTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEE
T ss_pred             HHHHHHHHhcCCEEEEEccCCCC------CCcCHHHHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEE
Confidence            57889999999999999985531      1355667889999999987543     35688899999999999887 478


Q ss_pred             ccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||+++++||+.+++++..||+|+++++
T Consensus       333 ~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          333 STDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             CGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             cHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            999999999999999889999998753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.54  E-value=5e-15  Score=102.58  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=77.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeeccccc----chHHHHHHHHHHHHcCceeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYH----QYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      +++++++++++||++.+|..++..     ..++. ..++.|++++.|++.+.+..    ...+.++++++++++|+|++.
T Consensus       246 ~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  320 (349)
T 3pi7_A          246 ASAIFNAMPKRARWIIYGRLDPDA-----TVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTD  320 (349)
T ss_dssp             HHHHHHHSCTTCEEEECCCSCCSC-----CCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-
T ss_pred             HHHHHhhhcCCCEEEEEeccCCCC-----CCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccc
Confidence            367899999999999999766531     23455 77899999999998765432    235678899999999999999


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      ++.++||+++++||+. .+++..||+|+++
T Consensus       321 i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          321 VTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             cceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            8888999999999994 5555789999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.53  E-value=2.8e-15  Score=103.06  Aligned_cols=100  Identities=19%  Similarity=0.249  Sum_probs=79.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|..++.     ..++++..++.|++++.|++...+. ....+.++++.+++++|++++.+..+
T Consensus       230 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~  304 (330)
T 1tt7_A          230 LASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDRE  304 (330)
T ss_dssp             HHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEE
T ss_pred             HHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceE
Confidence            56789999999999999986542     1234556788999999998532222 22345678888899999999888788


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      +||+++++||+.+++++..||+|+++
T Consensus       305 ~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          305 VSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             ECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999999999999998899999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.53  E-value=1.8e-14  Score=98.90  Aligned_cols=100  Identities=14%  Similarity=0.031  Sum_probs=80.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhc-ceeeeeeeecccc---cchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGK-RIRMEGFLAGDFY---HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k-~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++||++.+|..++.     ...+++..++.| ++++.++..+.|.   +...+.++++++++++|++++.+
T Consensus       222 ~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i  296 (327)
T 1qor_A          222 WERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDV  296 (327)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCccccc
Confidence            57889999999999999986642     123556677788 8888876543332   12456789999999999999988


Q ss_pred             e--eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           78 D--IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        78 ~--~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .  .++||+++++||+.+++++..||+|+++
T Consensus       297 ~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          297 AEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             ccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            8  7899999999999999998899999974

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.53  E-value=3.2e-14  Score=98.76  Aligned_cols=98  Identities=18%  Similarity=0.151  Sum_probs=78.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|..+.       ..++...++.|++++.|++...+ .+.+.+.++.+.+++++|++++.+..+
T Consensus       252 ~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~  324 (351)
T 1yb5_A          252 LSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQ  324 (351)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEE
T ss_pred             HHHHHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceE
Confidence            4678999999999999996321       13456678899999999865433 234566777888899999999998888


Q ss_pred             cccchHHHHHHH-hhcCCCcceEEEEe
Q 033914           81 EGLEKAPSALVG-IFTGQNVGKQLVVI  106 (109)
Q Consensus        81 ~~l~~~~~A~~~-l~~g~~~GKvvv~~  106 (109)
                      +||+++++||+. +++++..||+|+++
T Consensus       325 ~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          325 YPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             EEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             EcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999999999 56677799999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.51  E-value=3.2e-14  Score=97.53  Aligned_cols=92  Identities=20%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeecc
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEG   82 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~   82 (109)
                      ++++++++++||++.+|.....        .....+..+++++.|++...    .++.++++++++++|++++.+..++|
T Consensus       229 ~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~i~~~~~  296 (321)
T 3tqh_A          229 IQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQF----NIEELHYLGKLVSEDKLRIEISRIFQ  296 (321)
T ss_dssp             HHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCCC----CHHHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred             HHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecCC----CHHHHHHHHHHHHCCCcccccccEEc
Confidence            5788999999999999864431        12335678999999965322    25678999999999999999888899


Q ss_pred             cchHHHHHHHhhcCCCcceEEEEe
Q 033914           83 LEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        83 l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      |+++++||+.+++++..||+|+++
T Consensus       297 l~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          297 LSEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCceEEEEe
Confidence            999999999999999999999986

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.51  E-value=4.6e-14  Score=98.41  Aligned_cols=97  Identities=16%  Similarity=0.092  Sum_probs=78.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-------cchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-------HQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++||++++|...         ++++..+..|++++.|++.+...       ....+.++++++++++|+|+
T Consensus       253 ~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  323 (363)
T 4dvj_A          253 AAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLR  323 (363)
T ss_dssp             HHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCee
Confidence            567899999999999997422         24556678899999997654321       11256789999999999999


Q ss_pred             eeeeeec---ccchHHHHHHHhhcCCCcceEEEEee
Q 033914           75 YVEDIAE---GLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        75 ~~~~~~~---~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +.+..++   ||+++++||+.+++++..||+|+++.
T Consensus       324 ~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          324 TTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             CCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             ccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            9887655   99999999999999999999999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.51  E-value=3.2e-14  Score=98.33  Aligned_cols=95  Identities=14%  Similarity=0.048  Sum_probs=77.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCce--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKL--VYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l--~~~~~   78 (109)
                      +++++++++++||++.+|..++     + ..+++ ..++.|++++.|++...    .++.+.++++++++|++  ++.+.
T Consensus       245 ~~~~~~~l~~~G~iv~~g~~~~-----~-~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~~~~~~~i~  314 (343)
T 2dq4_A          245 IHQGLMALIPGGEARILGIPSD-----P-IRFDLAGELVMRGITAFGIAGRR----LWQTWMQGTALVYSGRVDLSPLLT  314 (343)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSS-----C-EEECHHHHTGGGTCEEEECCSCC----TTHHHHHHHHHHHHTSSCCGGGEE
T ss_pred             HHHHHHHHhcCCEEEEEecCCC-----C-ceeCcHHHHHhCceEEEEeecCC----CHHHHHHHHHHHHcCCCChHHhee
Confidence            4678999999999999998542     1 24566 67889999999986542    24568899999999995  56666


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      .++||+++++||+.+++++. ||+|++++
T Consensus       315 ~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          315 HRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             EEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             EEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            77899999999999999887 99999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.51  E-value=9.7e-15  Score=101.55  Aligned_cols=95  Identities=15%  Similarity=0.103  Sum_probs=78.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeec
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAE   81 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~   81 (109)
                      +++++++++++|+++.+|..++ .   +  .+++..++.|++++.|++.+.     ++.+.++++++++|++++.+ .++
T Consensus       259 ~~~~~~~l~~~G~iv~~g~~~~-~---~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~  326 (360)
T 1piw_A          259 FNIMPKAMKVGGRIVSISIPEQ-H---E--MLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETL  326 (360)
T ss_dssp             TTTGGGGEEEEEEEEECCCCCS-S---C--CEEECGGGCBSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEE
T ss_pred             HHHHHHHhcCCCEEEEecCCCC-c---c--ccCHHHHHhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEE
Confidence            4578899999999999998553 1   0  244456788999999987543     45788999999999999987 678


Q ss_pred             ccch--HHHHHHHhhcCCCcceEEEEeec
Q 033914           82 GLEK--APSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        82 ~l~~--~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ||++  +++||+.+++++..||+|+++++
T Consensus       327 ~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          327 PVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             ESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             eccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            9999  99999999999889999999865

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.50  E-value=3.2e-14  Score=98.44  Aligned_cols=98  Identities=18%  Similarity=0.207  Sum_probs=78.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc------ccchHHHHHHHHHHHHcCceee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF------YHQYPKFLELVMRAIKEGKLVY   75 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~------~~~~~~~~~~~~~~~~~G~l~~   75 (109)
                      ++.++++++++|+++.+|..+.         .++..+..|++++.|++....      .....+.++++++++++|+|++
T Consensus       229 ~~~~~~~l~~~G~iv~~g~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  299 (343)
T 3gaz_A          229 LDASFSAVKRFGHVVSCLGWGT---------HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP  299 (343)
T ss_dssp             HHHHHHHEEEEEEEEESCCCSC---------CCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHhcCCeEEEEcccCc---------cccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCccc
Confidence            5688999999999999997542         345667889999999875321      1124477899999999999999


Q ss_pred             eee-eecccchHHHHHHHhhcCCC----cceEEEEeec
Q 033914           76 VED-IAEGLEKAPSALVGIFTGQN----VGKQLVVIAR  108 (109)
Q Consensus        76 ~~~-~~~~l~~~~~A~~~l~~g~~----~GKvvv~~~~  108 (109)
                      .+. .++||+++++||+.++++++    .||+|+++..
T Consensus       300 ~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            888 58999999999999998765    6899998753

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.50  E-value=6.4e-14  Score=97.31  Aligned_cols=94  Identities=15%  Similarity=0.114  Sum_probs=76.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      ++.++++++++||++.+|....     + ..+++..++.|++++.|++..  .    +.+.++++++++|+++  +.+..
T Consensus       256 ~~~~~~~l~~~G~iv~~G~~~~-----~-~~~~~~~~~~~~~~i~g~~~~--~----~~~~~~~~l~~~g~i~~~~~i~~  323 (356)
T 1pl8_A          256 IQAGIYATRSGGTLVLVGLGSE-----M-TTVPLLHAAIREVDIKGVFRY--C----NTWPVAISMLASKSVNVKPLVTH  323 (356)
T ss_dssp             HHHHHHHSCTTCEEEECSCCCS-----C-CCCCHHHHHHTTCEEEECCSC--S----SCHHHHHHHHHTTSCCCGGGEEE
T ss_pred             HHHHHHHhcCCCEEEEEecCCC-----C-CccCHHHHHhcceEEEEeccc--H----HHHHHHHHHHHcCCCChHHheEE
Confidence            4678999999999999997332     1 235667789999999998743  2    2477888999999976  45566


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ++||+++++||+.++++ ..||+|+++++
T Consensus       324 ~~~l~~~~~A~~~~~~~-~~gKvvi~~~~  351 (356)
T 1pl8_A          324 RFPLEKALEAFETFKKG-LGLKIMLKCDP  351 (356)
T ss_dssp             EEEGGGHHHHHHHHHTT-CCSEEEEECCT
T ss_pred             EecHHHHHHHHHHHhCC-CceEEEEeCCC
Confidence            78999999999999988 88999999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.50  E-value=4.1e-14  Score=98.32  Aligned_cols=99  Identities=16%  Similarity=0.140  Sum_probs=78.4

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc----chHHHHHHHHHHHHcCceeeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH----QYPKFLELVMRAIKEGKLVYVED   78 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~G~l~~~~~   78 (109)
                      .+++++++++||++.+|..++..     ..++...++.|++++.|++...+..    ...+.++++++++++|++++.+.
T Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  333 (364)
T 1gu7_A          259 TGIARKLNNNGLMLTYGGMSFQP-----VTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS  333 (364)
T ss_dssp             HHHHHTSCTTCEEEECCCCSSCC-----EEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             HHHHHHhccCCEEEEecCCCCCC-----cccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccc
Confidence            36789999999999999865421     2355667888999999987654321    12467899999999999998877


Q ss_pred             eeccc---chHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGL---EKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l---~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .+++|   +++++||+.+++++..||+|+++
T Consensus       334 ~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          334 IETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             EEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             eEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            77766   49999999999998899999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.49  E-value=2.7e-14  Score=98.04  Aligned_cols=99  Identities=21%  Similarity=0.244  Sum_probs=77.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|..++..     .++++..++.|++++.|+....+. ....+.++++.+++++| +++. ..+
T Consensus       229 ~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~-~~~  301 (328)
T 1xa0_A          229 LATVLSRMRYGGAVAVSGLTGGAE-----VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI-AQE  301 (328)
T ss_dssp             HHHHHHTEEEEEEEEECSCCSSSC-----CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH-EEE
T ss_pred             HHHHHHhhccCCEEEEEeecCCCC-----CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee-eeE
Confidence            578999999999999999866421     134556778899999998532222 22345678888888888 8774 467


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEee
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      +||+++++||+.+++++..||+|++++
T Consensus       302 ~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          302 ISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             EEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             eCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            899999999999999988999999863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.49  E-value=1.1e-13  Score=96.49  Aligned_cols=98  Identities=19%  Similarity=0.221  Sum_probs=77.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +++++++++++||++++|..+..    ....+++..++.|++++.|++.+.+.  .++.++++++++++|++++.  +..
T Consensus       272 ~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~  345 (371)
T 1f8f_A          272 LKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF  345 (371)
T ss_dssp             HHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE
T ss_pred             HHHHHHHHhcCCEEEEeCCCCCC----CccccCHHHHHhCCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE
Confidence            56789999999999999986531    11245666788899999998764332  24678999999999999864  555


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                       +||+++++||+.+++++. +|+|++++
T Consensus       346 -~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          346 -YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             -EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             -ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence             899999999999998875 89999863

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.49  E-value=3.6e-14  Score=99.40  Aligned_cols=95  Identities=17%  Similarity=0.096  Sum_probs=79.7

Q ss_pred             HHHHHHhhccCCeEEEEcccc-ccCCCCCccccchHH-HhhcceeeeeeeecccccchHHHHHHHHHHHHc--Cceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMIS-QYNLEKSEGVHNLMQ-VVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKE--GKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~-~~~~~~~~~~~~~~~-~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--G~l~~~~   77 (109)
                      ++.++++++++||++.+|..+ +.     ..++++.. ++.|++++.|++.+.     ++.++++++++++  |++++.+
T Consensus       281 ~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i  350 (380)
T 1vj0_A          281 LLEGSELLRRGGFYSVAGVAVPQD-----PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLI  350 (380)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSCCC-----CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGC
T ss_pred             HHHHHHHHhcCCEEEEEecCCCCC-----CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEE
Confidence            568899999999999999865 31     12456666 889999999987643     4678899999999  9998888


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      ..++||+++++||+.+++++.. |+|++++
T Consensus       351 ~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          351 THRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             CEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             EEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            7789999999999999998888 9999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.48  E-value=9.6e-14  Score=96.21  Aligned_cols=95  Identities=15%  Similarity=0.125  Sum_probs=76.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV--YVEDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~--~~~~~   79 (109)
                      ++.++++++++||++.+|....      ...+++..++.|++++.|++..  .    +.+.++++++++|+++  +.+..
T Consensus       254 ~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~--~----~~~~~~~~l~~~g~i~~~~~i~~  321 (352)
T 1e3j_A          254 ITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFRY--C----NDYPIALEMVASGRCNVKQLVTH  321 (352)
T ss_dssp             HHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCSC--S----SCHHHHHHHHHTTSCCCGGGEEE
T ss_pred             HHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEEeccc--h----HHHHHHHHHHHcCCCChHHheeE
Confidence            4678999999999999997432      1235667789999999998643  2    2477888899999975  45566


Q ss_pred             ecccchHHHHHHHhhcCC-CcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTGQ-NVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~-~~GKvvv~~~~  108 (109)
                      ++||+++++||+.+++++ ..||+|+++++
T Consensus       322 ~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          322 SFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             EEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             EecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            789999999999999988 68999998763

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.46  E-value=1.3e-13  Score=95.96  Aligned_cols=89  Identities=18%  Similarity=0.259  Sum_probs=73.7

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeeeeeeecc
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYVEDIAEG   82 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~   82 (109)
                      +.++++  ++||++.+|..++     +  .+++..++.|++++.|++.+.     ++.+.++++++++|++++.+ .++|
T Consensus       271 ~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~  335 (359)
T 1h2b_A          271 TPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVSFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHK  335 (359)
T ss_dssp             GGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEE
T ss_pred             HHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEe
Confidence            445555  8999999998553     1  355667889999999987543     45788999999999999988 7899


Q ss_pred             cchHHHHHHHhhcCCCcceEEEEe
Q 033914           83 LEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        83 l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      |+++++||+.+++++..||+|+++
T Consensus       336 l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          336 LDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCceEEEeeC
Confidence            999999999999998899999974

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.45  E-value=5.8e-14  Score=98.09  Aligned_cols=97  Identities=10%  Similarity=0.087  Sum_probs=76.1

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--eee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--EDI   79 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~~   79 (109)
                      +++++++++++||++++|..++.    ...++++..++.|++++.|++.+.      ..+.++++++++|++++.  +..
T Consensus       267 ~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~  336 (370)
T 4ej6_A          267 VKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFINP------FVHRRAADLVATGAIEIDRMISR  336 (370)
T ss_dssp             HHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCSCT------TCHHHHHHHHHTTCSCCGGGEEE
T ss_pred             HHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEeccCh------HHHHHHHHHHHcCCCChhHcEEE
Confidence            57889999999999999986542    112466778999999999998643      237888999999999654  667


Q ss_pred             ecccchHHHHHHHhhcCC-CcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTGQ-NVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~-~~GKvvv~~~~  108 (109)
                      ++||+++++||+.+++++ ..+|+++++++
T Consensus       337 ~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          337 RISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             EECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             EEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            789999999999998877 46888887643

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.44  E-value=5.3e-13  Score=93.32  Aligned_cols=99  Identities=12%  Similarity=0.067  Sum_probs=76.2

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--ee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--ED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~~   78 (109)
                      +++++++++++ ||++++|..+..    ...+++...++ +++++.|++.+.+.  .++.+.++++++++|++++.  +.
T Consensus       277 ~~~~~~~l~~g~G~iv~~G~~~~~----~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~  349 (378)
T 3uko_A          277 MRAALECCHKGWGTSVIVGVAASG----QEISTRPFQLV-TGRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYIT  349 (378)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHHHH-TTCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEE
T ss_pred             HHHHHHHhhccCCEEEEEcccCCC----CccccCHHHHh-cCcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHhee
Confidence            57889999996 999999985532    11234444444 48999998765443  35678899999999999854  66


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      .++||+++++||+.+++++.. |+||++++
T Consensus       350 ~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          350 HNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             EEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             eEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            678999999999999988865 99998753

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.44  E-value=2.7e-13  Score=93.84  Aligned_cols=95  Identities=16%  Similarity=0.159  Sum_probs=75.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCce--eeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKL--VYVED   78 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l--~~~~~   78 (109)
                      +++++++++++||++.+|..++.      ..+++ ..++.|++++.|++...    .++.+.++++++++|++  ++.+.
T Consensus       250 ~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~  319 (348)
T 2d8a_A          250 LEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFKALTIYGITGRH----LWETWYTVSRLLQSGKLNLDPIIT  319 (348)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTTTCEEEECCCCC----SHHHHHHHHHHHHHTCCCCTTTEE
T ss_pred             HHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhCCcEEEEecCCC----cHHHHHHHHHHHHcCCCChHHhhe
Confidence            46789999999999999985531      23556 67889999999986532    14578899999999996  45566


Q ss_pred             eecc-cchHHHHHHHhhcCCCcceEEEEee
Q 033914           79 IAEG-LEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        79 ~~~~-l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                      .++| |+++++||+.+++ +..||+|++++
T Consensus       320 ~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          320 HKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             EEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             eeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            6789 9999999999987 56899999763

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.43  E-value=4e-13  Score=92.73  Aligned_cols=99  Identities=13%  Similarity=0.250  Sum_probs=73.0

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHh-hcceeeeeeeecccc-----cchHHHHHHHHHHHHcCceee-
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVV-GKRIRMEGFLAGDFY-----HQYPKFLELVMRAIKEGKLVY-   75 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~-~k~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~G~l~~-   75 (109)
                      ..++++++++||++.+|..++.       +.++..+. ..++++.+++...+.     ...++.++++++++++|++++ 
T Consensus       227 ~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  299 (340)
T 3gms_A          227 NELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFM  299 (340)
T ss_dssp             HHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccc
Confidence            4567899999999999986652       23333333 345566655543221     124578899999999999998 


Q ss_pred             eeeeecccchHHHHHHHhhcCCC-cceEEEEeec
Q 033914           76 VEDIAEGLEKAPSALVGIFTGQN-VGKQLVVIAR  108 (109)
Q Consensus        76 ~~~~~~~l~~~~~A~~~l~~g~~-~GKvvv~~~~  108 (109)
                      .+..++||+++++||+.++++++ .||+|+++.+
T Consensus       300 ~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          300 KVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             CEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             cccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            46677899999999999999985 5999999854

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.43  E-value=8.6e-13  Score=92.08  Aligned_cols=96  Identities=14%  Similarity=0.110  Sum_probs=75.4

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++++++ ||++.+|..++.     ...+++..++.++ ++.|++.+.+.  ..+.+.++++++++|++++  .+.
T Consensus       276 ~~~~~~~l~~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~  347 (374)
T 1cdo_A          276 MRNALESCLKGWGVSVLVGWTDLH-----DVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFIT  347 (374)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCSSS-----CEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEE
T ss_pred             HHHHHHHhhcCCcEEEEEcCCCCC-----CcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHhee
Confidence            56789999999 999999986531     1235556677888 99998754332  2457889999999999984  456


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++. +|+||++
T Consensus       348 ~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          348 HRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             EEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             eEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            67899999999999998874 8999864

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.42  E-value=1.1e-12  Score=91.48  Aligned_cols=97  Identities=12%  Similarity=0.117  Sum_probs=75.5

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++++++ ||++.+|..+..    ....++...++.++ ++.|++.+.+.  .++.+.++++++++|++++  .+.
T Consensus       275 ~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~  347 (374)
T 2jhf_A          275 MVTALSCCQEAYGVSVIVGVPPDS----QNLSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLIT  347 (374)
T ss_dssp             HHHHHHHBCTTTCEEEECSCCCTT----CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEE
T ss_pred             HHHHHHHhhcCCcEEEEeccCCCC----CccccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheE
Confidence            56789999999 999999975531    11235556777888 99998764432  2467889999999999985  456


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++ .+|+|+++
T Consensus       348 ~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  374 (374)
T 2jhf_A          348 HVLPFEKINEGFDLLRSGE-SIRTILTF  374 (374)
T ss_dssp             EEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             EEEeHHHHHHHHHHHHCCC-cceEEEeC
Confidence            6789999999999999887 48999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.42  E-value=9.5e-14  Score=97.73  Aligned_cols=100  Identities=16%  Similarity=0.102  Sum_probs=76.7

Q ss_pred             HHHHHHhhccCCeEEEEcccc-ccCCC------CCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMIS-QYNLE------KSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~-~~~~~------~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      +++++++++++||++++|... +....      ....++++..++.|++++.|++...     .+.+.++++++++|+++
T Consensus       282 ~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~  356 (398)
T 2dph_A          282 LNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMP  356 (398)
T ss_dssp             HHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCC
Confidence            578899999999999999862 11000      0112355667889999999876432     34577899999999999


Q ss_pred             --e--eeeeecccchHHHHHHHhhcCCCcceEEEEee
Q 033914           75 --Y--VEDIAEGLEKAPSALVGIFTGQNVGKQLVVIA  107 (109)
Q Consensus        75 --~--~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~  107 (109)
                        +  .++.++||+++++||+.+.+++. ||+|++++
T Consensus       357 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~  392 (398)
T 2dph_A          357 YLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPH  392 (398)
T ss_dssp             HHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTT
T ss_pred             ccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecC
Confidence              6  45667899999999999999887 99999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.42  E-value=1.1e-12  Score=91.44  Aligned_cols=97  Identities=15%  Similarity=0.130  Sum_probs=75.4

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      +++++++++++ ||++.+|..+..    ....+++..++.++ ++.|++.+.+.  .++.++++++++++|++++  .+.
T Consensus       274 ~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~  346 (373)
T 2fzw_A          274 MRAALEACHKGWGVSVVVGVAASG----EEIATRPFQLVTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVT  346 (373)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEE
T ss_pred             HHHHHHhhccCCcEEEEEecCCCC----ceeeeCHHHHhcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEe
Confidence            56789999999 999999975531    11234556677888 99998754332  2467889999999999984  456


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++. +|+|+++
T Consensus       347 ~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          347 HNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             EEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             EEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            67899999999999998875 7999864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.41  E-value=1.2e-12  Score=91.48  Aligned_cols=95  Identities=17%  Similarity=0.138  Sum_probs=74.9

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      +++++++++++ ||++++|....      ..++++..++.++ ++.|++.+.+.  ..+.+.++++++++|+|++  .+.
T Consensus       279 ~~~~~~~l~~~~G~iv~~G~~~~------~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~  349 (376)
T 1e3i_A          279 LKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVT  349 (376)
T ss_dssp             HHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEE
T ss_pred             HHHHHHHhhcCCCEEEEECCCCC------ccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEe
Confidence            56889999999 99999998321      1245666778888 99998754332  2467889999999999984  456


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++ .+|+|+++
T Consensus       350 ~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          350 HALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             EEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             eeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            6789999999999999887 58999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.40  E-value=2.3e-13  Score=94.80  Aligned_cols=95  Identities=9%  Similarity=0.053  Sum_probs=75.4

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHH---HhhcceeeeeeeecccccchHHHHHHHHHHHHcCc------e
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQ---VVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK------L   73 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~---~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~------l   73 (109)
                      +.++++++++|+++.+|..++.     ...+++..   ++.|++++.|++.+.     ++.++++++++++|+      +
T Consensus       262 ~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~  331 (366)
T 2cdc_A          262 GNVIPLLGRNGVLGLFGFSTSG-----SVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAA  331 (366)
T ss_dssp             HHHGGGEEEEEEEEECSCCCSC-----EEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHH
T ss_pred             HHHHHHHhcCCEEEEEecCCCC-----ccccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccch
Confidence            6788999999999999986542     12355566   889999999986532     467889999999999      5


Q ss_pred             eeeeeeecccchHHHHHHHh-hcCCCcceEEEEee
Q 033914           74 VYVEDIAEGLEKAPSALVGI-FTGQNVGKQLVVIA  107 (109)
Q Consensus        74 ~~~~~~~~~l~~~~~A~~~l-~~g~~~GKvvv~~~  107 (109)
                      ++.++.++||+++++||+.+ .+++..||+|++++
T Consensus       332 ~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          332 KMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             TTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             hhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            57777789999999999994 33667899999863

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.40  E-value=7.4e-13  Score=91.75  Aligned_cols=98  Identities=9%  Similarity=-0.030  Sum_probs=74.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch--HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee--e
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL--MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV--E   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~--~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~--~   77 (109)
                      +++++++++++||++.+|..++..   + .+++.  ..+..+++++.|++...    .++.++++++++++|++++.  +
T Consensus       249 ~~~~~~~l~~~G~~v~~G~~~~~~---~-~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i  320 (352)
T 3fpc_A          249 FAQAVKMIKPGSDIGNVNYLGEGD---N-IDIPRSEWGVGMGHKHIHGGLCPG----GRLRMERLIDLVFYKRVDPSKLV  320 (352)
T ss_dssp             HHHHHHHEEEEEEEEECCCCCSCS---E-EEEETTTTGGGTBCEEEEEBCCCC----HHHHHHHHHHHHHTTSCCGGGGE
T ss_pred             HHHHHHHHhcCCEEEEecccCCCC---c-eecchhHhhhhccccEEEEeeccC----chhHHHHHHHHHHcCCCChhHhh
Confidence            578899999999999999865421   1 11211  12346899999986532    24568899999999999985  5


Q ss_pred             eeecc-cchHHHHHHHhhcCCC-cceEEEEee
Q 033914           78 DIAEG-LEKAPSALVGIFTGQN-VGKQLVVIA  107 (109)
Q Consensus        78 ~~~~~-l~~~~~A~~~l~~g~~-~GKvvv~~~  107 (109)
                      +.+++ |+++++||+.+++++. .||+|++++
T Consensus       321 ~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          321 THVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             EEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             eeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            56688 9999999999998765 599999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.40  E-value=1.3e-13  Score=95.85  Aligned_cols=94  Identities=12%  Similarity=-0.025  Sum_probs=76.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHH----hhcceeeeeeeecccccchHHHHHHHHHHHHcC--c-ee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQV----VGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG--K-LV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~----~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G--~-l~   74 (109)
                      +++++++++++||++.+|..++.    + .++++..+    +.|++++.|++.+.     ++.++++++++++|  + ++
T Consensus       256 ~~~~~~~l~~~G~iv~~g~~~~~----~-~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~  325 (357)
T 2b5w_A          256 AIQSVQALAPNGVGALLGVPSDW----A-FEVDAGAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLE  325 (357)
T ss_dssp             HHHHHHHEEEEEEEEECCCCCCC----C-CCCCHHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHH
T ss_pred             HHHHHHHHhcCCEEEEEeCCCCC----C-ceecHHHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhh
Confidence            56889999999999999986531    1 23555666    89999999987543     46788999999999  9 68


Q ss_pred             eeeeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           75 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        75 ~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +.++.++||+++++||+.+   +..||+|+++++
T Consensus       326 ~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          326 DLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             hhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            8787789999999999998   457999998864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.40  E-value=1.1e-12  Score=91.42  Aligned_cols=96  Identities=14%  Similarity=0.150  Sum_probs=74.2

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--eee
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--VED   78 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~   78 (109)
                      ++.++++++++ ||++.+|..+..    ....++...++.++ ++.|++.+.+.   ++.++++++++++|++++  .+.
T Consensus       275 ~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~  346 (373)
T 1p0f_A          275 MMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVS  346 (373)
T ss_dssp             HHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEE
T ss_pred             HHHHHHHHhcCCCEEEEEccCCCC----CccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEE
Confidence            56789999999 999999975531    11234556677788 99998765432   246788999999999984  456


Q ss_pred             eecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           79 IAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        79 ~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .++||+++++||+.+++++. +|+|+++
T Consensus       347 ~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          347 TKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             EEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             EEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            67899999999999988774 8999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.40  E-value=3.4e-14  Score=97.09  Aligned_cols=100  Identities=13%  Similarity=-0.010  Sum_probs=69.8

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc---chHHHHHHHHHHHHcCceeeeeee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH---QYPKFLELVMRAIKEGKLVYVEDI   79 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~---~~~~~~~~~~~~~~~G~l~~~~~~   79 (109)
                      +.++++++++||++.+|.....    ...+.....+..+++++.|++......   ...+.++++++++++|++++.+..
T Consensus       213 ~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~  288 (315)
T 3goh_A          213 AALVPSLKANGHIICIQDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPD  288 (315)
T ss_dssp             -TTGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCE
T ss_pred             HHHHHHhcCCCEEEEEeCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccce
Confidence            5678899999999999864321    101111123445666666665422211   234568899999999999999888


Q ss_pred             ecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           80 AEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        80 ~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ++||+++++||+.++  +..||+|+++++
T Consensus       289 ~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          289 IFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             EEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             EecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            899999999999998  678999999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.39  E-value=7.9e-13  Score=92.93  Aligned_cols=101  Identities=16%  Similarity=0.092  Sum_probs=76.3

Q ss_pred             HHHHHHhhccCCeEEEEccc-cccCCCC------CccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMI-SQYNLEK------SEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~-~~~~~~~------~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      +++++++++++||++++|.. ++.....      ....+++..++.|++++.|+...     ..+.+.++++++++|+++
T Consensus       283 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~  357 (398)
T 1kol_A          283 LNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRIN  357 (398)
T ss_dssp             HHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCC
Confidence            56889999999999999975 2210000      01234566778899999986432     245678899999999998


Q ss_pred             ---eeeeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           75 ---YVEDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        75 ---~~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                         +.+..++||+++++||+.+++++. ||+|++++.
T Consensus       358 ~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          358 IAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             CccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence               445677899999999999999887 999998743

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.37  E-value=1.5e-12  Score=98.68  Aligned_cols=100  Identities=16%  Similarity=0.136  Sum_probs=78.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHcCceeeeeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMRAIKEGKLVYVEDIA   80 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~G~l~~~~~~~   80 (109)
                      +++++++++++||++.+|.....      .+..+ ....+++++.++.+... .....+.+.++++++++|+|++.+..+
T Consensus       425 ~~~~l~~l~~~Gr~v~iG~~~~~------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~  497 (795)
T 3slk_A          425 ADASLRMLPRGGRFLELGKTDVR------DPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTA  497 (795)
T ss_dssp             THHHHTSCTTCEEEEECCSTTCC------CHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEE
T ss_pred             HHHHHHHhcCCCEEEEecccccc------Ccccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCccee
Confidence            57889999999999999975542      11112 22347888887764322 223457789999999999999988888


Q ss_pred             cccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           81 EGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        81 ~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      |||+++++||+.|.++++.||+||++++
T Consensus       498 ~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          498 WDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             EEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             EcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            9999999999999999999999998753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.34  E-value=1.7e-12  Score=90.70  Aligned_cols=106  Identities=9%  Similarity=0.054  Sum_probs=74.1

Q ss_pred             HHHHHHhh-ccCCeEEEEccccccCCCCCcccc---chHHHhhcceeeeeeeecccccc----hHHHHHHHHHHHHcCce
Q 033914            2 LDAVRLNM-RIRGRIAVCGMISQYNLEKSEGVH---NLMQVVGKRIRMEGFLAGDFYHQ----YPKFLELVMRAIKEGKL   73 (109)
Q Consensus         2 ~~~~l~~l-~~~Griv~~G~~~~~~~~~~~~~~---~~~~~~~k~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~G~l   73 (109)
                      ++.+++++ +++||++.+|..++........+.   ....++.|++++.|++...+...    ..+.+.++++++++|+|
T Consensus       245 ~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  324 (371)
T 3gqv_A          245 TTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRL  324 (371)
T ss_dssp             HHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCee
Confidence            56788999 599999999975542100100111   12357789999999865433221    22345688899999999


Q ss_pred             eeeeeee--cccchHHHHHHHhhcCCCcce-EEEEee
Q 033914           74 VYVEDIA--EGLEKAPSALVGIFTGQNVGK-QLVVIA  107 (109)
Q Consensus        74 ~~~~~~~--~~l~~~~~A~~~l~~g~~~GK-vvv~~~  107 (109)
                      ++....+  +||+++++||+.+++++..|| +|+++.
T Consensus       325 ~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~  361 (371)
T 3gqv_A          325 VHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLE  361 (371)
T ss_dssp             CCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEEC
T ss_pred             eCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeC
Confidence            9987665  799999999999999999995 455543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.33  E-value=1.1e-12  Score=92.59  Aligned_cols=91  Identities=12%  Similarity=0.088  Sum_probs=72.2

Q ss_pred             HHHHHhh----ccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee--e
Q 033914            3 DAVRLNM----RIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY--V   76 (109)
Q Consensus         3 ~~~l~~l----~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~   76 (109)
                      +.+++++    +++||++++|..++.      .++++..++.|++++.|++....    ++.+.++++++++| +++  .
T Consensus       298 ~~~~~~l~~~~~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~  366 (404)
T 3ip1_A          298 PQIEEVIWRARGINATVAIVARADAK------IPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKI  366 (404)
T ss_dssp             HHHHHHHHHCSCCCCEEEECSCCCSC------EEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGG
T ss_pred             HHHHHHHHhccCCCcEEEEeCCCCCC------CcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhhe
Confidence            4566777    999999999986642      24677889999999999975322    34677899999999 765  4


Q ss_pred             eeeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           77 EDIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        77 ~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      +..++||+++++||+.+.    .||+|+++++
T Consensus       367 i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          367 ISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             CCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             EEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            556789999999999997    6899988754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.27  E-value=2.8e-12  Score=89.54  Aligned_cols=104  Identities=15%  Similarity=0.184  Sum_probs=69.2

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccch----HHHhhcce-ee-eeeeec-ccccchHHHHHHHHHHHHcCceee
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL----MQVVGKRI-RM-EGFLAG-DFYHQYPKFLELVMRAIKEGKLVY   75 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~----~~~~~k~~-~~-~G~~~~-~~~~~~~~~~~~~~~~~~~G~l~~   75 (109)
                      ++++++++++||++.+|..+..+.+....+.++    ..++.+++ ++ .|+... .+.....+.++++++++++|++++
T Consensus       264 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  343 (375)
T 2vn8_A          264 APDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRP  343 (375)
T ss_dssp             GGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCC
T ss_pred             HHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCccc
Confidence            677888999999999997543100000000000    12334433 22 333221 111112467899999999999999


Q ss_pred             eeeeecccchHHHHHHHhhcCCCcceEEEEe
Q 033914           76 VEDIAEGLEKAPSALVGIFTGQNVGKQLVVI  106 (109)
Q Consensus        76 ~~~~~~~l~~~~~A~~~l~~g~~~GKvvv~~  106 (109)
                      .+..++||+++++||+.+++++..||+|+++
T Consensus       344 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          344 VIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             CcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            8888899999999999999998899999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.24  E-value=1.7e-12  Score=90.98  Aligned_cols=88  Identities=13%  Similarity=0.095  Sum_probs=66.7

Q ss_pred             CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc-----cchHHHHHHHHHHHHcCceeeeeeeecccchH-
Q 033914           13 GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-----HQYPKFLELVMRAIKEGKLVYVEDIAEGLEKA-   86 (109)
Q Consensus        13 Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~G~l~~~~~~~~~l~~~-   86 (109)
                      |+++++|..+..       +.++..++.+++++.|++++.+.     +.+.+.++++.+++.+ ++++.++.++||+++ 
T Consensus       281 g~iv~~G~~~~~-------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~  352 (379)
T 3iup_A          281 KQVYLYGGLDTS-------PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVL  352 (379)
T ss_dssp             EEEEECCCSEEE-------EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHT
T ss_pred             ceEEEecCCCCC-------ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhh
Confidence            566666654431       23344567899999999876652     1234556788888888 589988888999999 


Q ss_pred             -HHHHHHhhcCCCcceEEEEeec
Q 033914           87 -PSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        87 -~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                       ++||+.+.+++..||+||+++.
T Consensus       353 ~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          353 DLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             CHHHHHHHTTCCTTCCEEEETTT
T ss_pred             hHHHHHHHhcCCCCceEEEeCCC
Confidence             9999999999999999999854

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.03  E-value=2.2e-10  Score=94.85  Aligned_cols=102  Identities=21%  Similarity=0.260  Sum_probs=77.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc----cchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      +++++++++++||++.+|......   .  ......++.+++++.|+....+.    ..+.+.++.+.+++.+|++++.+
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~---~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i 1827 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSN---N--HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHT---T--CEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCC
T ss_pred             HHHHHHhcCCCcEEEEeecccccc---c--CcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCc
Confidence            567899999999999999754321   0  11123467899999998764432    22344555566667789999988


Q ss_pred             eeecccchHHHHHHHhhcCCCcceEEEEeec
Q 033914           78 DIAEGLEKAPSALVGIFTGQNVGKQLVVIAR  108 (109)
Q Consensus        78 ~~~~~l~~~~~A~~~l~~g~~~GKvvv~~~~  108 (109)
                      ..++||+++++||+.+.++++.||+|+++++
T Consensus      1828 ~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             EEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred             ceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence            8889999999999999999999999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.99  E-value=5e-06  Score=52.83  Aligned_cols=73  Identities=15%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecc----cccchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGD----FYHQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~----~~~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++||++.+|..+.+.   + .++++. .+.|++++.++....    ......+.++++++++++|++++.+
T Consensus       120 ~~~~~~~l~~~G~~v~~g~~~~~~---~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          120 IQRGVQILAPGGRFIELGKKDVYA---D-ASLGLA-ALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             HHHHHHTEEEEEEEEECSCGGGTT---T-CEEEGG-GGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHhccCCEEEEEcCCCCcC---c-CcCChh-HhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            467899999999999999866421   1 123332 357889998764410    1112356789999999999999876


Q ss_pred             ee
Q 033914           78 DI   79 (109)
Q Consensus        78 ~~   79 (109)
                      ..
T Consensus       195 ~~  196 (198)
T 1pqw_A          195 VT  196 (198)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=85.83  E-value=0.041  Score=39.95  Aligned_cols=88  Identities=6%  Similarity=-0.005  Sum_probs=50.5

Q ss_pred             HHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcce---eeeeeeecccccchHHHHHHHHHHHHcCcee------
Q 033914            4 AVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRI---RMEGFLAGDFYHQYPKFLELVMRAIKEGKLV------   74 (109)
Q Consensus         4 ~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~---~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~------   74 (109)
                      ..++.++++|+++.+|....        .++...++.+.+   ++.+..- .+.  ++ .+...+.++.+|++.      
T Consensus       346 ~~l~~mk~ggilvnvG~~~~--------eId~~aL~~~aL~~~~I~~~ld-v~~--~~-~~~~~l~LL~~grlvnL~~~T  413 (494)
T 3ce6_A          346 EHIKAMKDHAILGNIGHFDN--------EIDMAGLERSGATRVNVKPQVD-LWT--FG-DTGRSIIVLSEGRLLNLGNAT  413 (494)
T ss_dssp             HHHHHSCTTCEEEECSSSGG--------GBCHHHHHHTTCEEEEEETTEE-EEE--CT-TTCCEEEEEGGGSCHHHHHSC
T ss_pred             HHHHhcCCCcEEEEeCCCCC--------ccCHHHHHHhhhccceEEEEEE-Eee--cC-CcchHHHHHhCCCEEeccCCC
Confidence            67899999999999997432        244555555433   5655431 110  00 011223355666664      


Q ss_pred             eeee----eecccchHHHHHHHhhcCCCcceEEE
Q 033914           75 YVED----IAEGLEKAPSALVGIFTGQNVGKQLV  104 (109)
Q Consensus        75 ~~~~----~~~~l~~~~~A~~~l~~g~~~GKvvv  104 (109)
                      |.+.    .++ ++++.++++.+.+++..++.|+
T Consensus       414 PH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V~  446 (494)
T 3ce6_A          414 GHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEVY  446 (494)
T ss_dssp             CSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSEE
T ss_pred             CCccccchHHH-HHHHHHHHHHHHcCCCCCCEEE
Confidence            2211    112 5688899999988877666554

>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23

Probab=81.10  E-value=0.51  Score=31.90  Aligned_cols=22  Identities=23%  Similarity=0.253  Sum_probs=19.5

Q ss_pred             HHHHHHhhccCCeEEEEccccc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQ   23 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~   23 (109)
                      +++++++|++|||++++-.+|-
T Consensus       216 L~~a~~~L~~gGrl~visfHSL  237 (285)
T 1wg8_A          216 LEQAAEVLAPGGRLVVIAFHSL  237 (285)
T ss_dssp             HHHHHHHEEEEEEEEEEECSHH
T ss_pred             HHHHHHHhcCCCEEEEEecCcH
Confidence            5788999999999999988774

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=80.51  E-value=0.88  Score=31.40  Aligned_cols=70  Identities=13%  Similarity=-0.023  Sum_probs=41.6

Q ss_pred             HHHHHhhccCCeEEEEccccccCCCC-CccccchHHHhhcceeeeeeeeccc--c----cch-HHHHHHHHHHHHcCc
Q 033914            3 DAVRLNMRIRGRIAVCGMISQYNLEK-SEGVHNLMQVVGKRIRMEGFLAGDF--Y----HQY-PKFLELVMRAIKEGK   72 (109)
Q Consensus         3 ~~~l~~l~~~Griv~~G~~~~~~~~~-~~~~~~~~~~~~k~~~~~G~~~~~~--~----~~~-~~~~~~~~~~~~~G~   72 (109)
                      +..++.++++|+++.+|...+.+.+. ....++...+..+++++.|+.....  .    ..+ ...+..+++++++|.
T Consensus       251 ~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~~~G~  328 (361)
T 1pjc_A          251 ASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            56788999999999999765421100 0112333446678899888642111  0    011 234577888998883

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	109
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	4e-09
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	9e-06
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	5e-05
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	4e-04

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.2 bits (116), Expect = 4e-09
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEG----VHNLMQVVGKRIRMEGFLAGDFYHQ 56
           + + V   M     I +CG ISQYN +                 + I  E F   ++  +
Sbjct: 112 ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDK 171

Query: 57  YPKFLELVMRAIKEGK 72
           +   +  + +  KEGK
Sbjct: 172 FEPGILQLSQWFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 40.0 bits (92), Expect = 9e-06
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 8   NMRIRGRIAVCGMISQYNLEKS-EGVHNLMQVVGKRIRMEGFLAGDFY-HQYPKFLELVM 65
            M+  G+IA+CG IS YN         +   ++ K++R+EGF+   +      K L  +M
Sbjct: 117 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM 176

Query: 66  RAIKEG 71
           + + EG
Sbjct: 177 KWVLEG 182

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 5e-05
 Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 8/72 (11%)

Query: 1   MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY-HQYPK 59
            L      +   GR+ V G      +       N    + K   + G         ++ +
Sbjct: 109 NLSKDLSLLSHGGRVIVVGSRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQ 161

Query: 60  FLELVMRAIKEG 71
           +   +   ++ G
Sbjct: 162 YAAALQAGMEIG 173

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 35.8 bits (81), Expect = 4e-04
 Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 9/74 (12%)

Query: 3   DAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKF-- 60
             +   +   G +   G +S   +            + K     GF   +      +   
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVT-----IPTSLYIFKNFTSAGFWVTELLKNNKELKT 175

Query: 61  --LELVMRAIKEGK 72
             L  ++   +EGK
Sbjct: 176 STLNQIIAWYEEGK 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	109
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	98.98
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	98.83
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.83
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	98.83
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	98.8
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	98.8
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	98.78
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	98.76
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	98.75
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.74
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.65
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	98.6
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.49
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.46
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	98.46
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.46
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.36
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	98.27
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.25
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.12
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.9
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.81
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.72
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.32
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.11
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.0

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=2.3e-10  Score=71.56  Aligned_cols=71  Identities=24%  Similarity=0.258  Sum_probs=49.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCcc-cc---chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEG-VH---NLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~-~~---~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++++++++||++.||..++++.+.+.. +.   ....+..|+++++||.+.+|.+.+++.++++.+|+++|+
T Consensus       113 ~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         113 SNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             HHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            578899999999999999988875432211 11   123466799999999998888888999999999999996

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.91  E-value=7.3e-10  Score=68.85  Aligned_cols=70  Identities=31%  Similarity=0.444  Sum_probs=55.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCC-ccccchHHHhhcceeeeeeeeccccc-chHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKS-EGVHNLMQVVGKRIRMEGFLAGDFYH-QYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~-~~~~~~~~~~~k~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~G   71 (109)
                      +++++++++++|++++||..++++...+ ...+++..++.|++++.||++.+|.. .+++.++++++|+++|
T Consensus       111 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         111 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccChHHHHHHHHHHHHHHhCc
Confidence            5788999999999999999887754322 12356678999999999999888754 3457789999999987

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=5e-10  Score=68.83  Aligned_cols=62  Identities=18%  Similarity=0.206  Sum_probs=50.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      +++++++++++|+++++|..++.      .++++..++.|++++.|+++++     +++++++++++++|+||
T Consensus       107 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~Gs~~g~-----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         107 FNIMPKAMKVGGRIVSISIPEQH------EMLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             TTTGGGGEEEEEEEEECCCCCSS------CCEEECGGGCBSCEEEECCCCC-----HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhhccceEEEecccccc------ccccHHHHHhCCcEEEEEeeCC-----HHHHHHHHHHHHhCCCC
Confidence            46788999999999999975542      2456667899999999998765     45789999999999986

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.83  E-value=1.9e-09  Score=67.40  Aligned_cols=66  Identities=15%  Similarity=0.140  Sum_probs=52.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccccc----chHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYH----QYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++++|+++||+|.+|..++.     ...++...++.|++++.||+++.+..    ...+.++++++|+++|+
T Consensus       120 ~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         120 STGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             HHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             hhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHHCCcEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            46789999999999999987763     12467788899999999998866542    23467899999999986

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=98.83  E-value=1.6e-09  Score=66.70  Aligned_cols=59  Identities=20%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++||++++|..+.       .++++..++.|++++.|++.++     +++++++++|+++||
T Consensus       114 ~~~a~~~l~~~G~iv~~G~~~~-------~~~~~~~l~~k~~~i~Gs~~~~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         114 VDYTPYLLGRMGRLIIVGYGGE-------LRFPTIRVISSEVSFEGSLVGN-----YVELHELVTLALQGK  172 (172)
T ss_dssp             HHHGGGGEEEEEEEEECCCSSC-------CCCCHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhCCCEEEEEeCccc-------ccCCHHHHHhCCcEEEEEEecC-----HHHHHHHHHHHHcCC
Confidence            5788999999999999996331       2467788999999999998765     356889999999996

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=98.80  E-value=3.6e-09  Score=65.23  Aligned_cols=65  Identities=22%  Similarity=0.240  Sum_probs=52.0

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++++++++|+++++|.....    ...++++..++.|++++.|++.+++.  .+++++++++|+++||
T Consensus       110 ~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~~i~Gs~~g~~~--~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         110 LKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTS
T ss_pred             HHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCCEEEEEEecCCC--hHHHHHHHHHHHHcCC
Confidence            57889999999999999975432    12357788899999999999876543  3567899999999996

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=98.80  E-value=1.6e-09  Score=66.41  Aligned_cols=60  Identities=18%  Similarity=0.222  Sum_probs=49.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++|+++++|..+..      .+++...++.|++++.|++.++     ++++.++++|+++||
T Consensus       111 ~~~a~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~i~i~Gs~~~~-----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         111 LSVYPKALAKQGKYVMVGLFGAD------LHYHAPLITLSEIQFVGSLVGN-----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             HTTGGGGEEEEEEEEECCSSCCC------CCCCHHHHHHHTCEEEECCSCC-----HHHHHHHHHHHHTTS
T ss_pred             HHhhhhhcccCCEEEEeccccCc------cccCHHHHHhCCcEEEEEecCC-----HHHHHHHHHHHHcCC
Confidence            46788999999999999975531      3577888999999999998754     467889999999996

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.78  E-value=3.4e-09  Score=64.61  Aligned_cols=62  Identities=19%  Similarity=0.258  Sum_probs=51.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      +++++++++++|+++++|..++.      .+++...++.|++++.|++.+.     +++++++++++++|+|+
T Consensus       107 ~~~a~~~l~~~G~i~~~g~~~~~------~~~~~~~~~~~~~~i~gs~~~~-----~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         107 FQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT-----RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHhccCCceEecccccCC------CCCCHHHHHHCCcEEEEEeeCC-----HHHHHHHHHHHHhCCCC
Confidence            57899999999999999975542      2567888999999999987643     45788999999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.76  E-value=2.8e-09  Score=65.08  Aligned_cols=59  Identities=22%  Similarity=0.218  Sum_probs=49.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G   71 (109)
                      +++++++++++|+++++|...+.      .++++..++.|++++.|++.++     +++++++++|+++|
T Consensus       107 ~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~Gs~~~~-----~~d~~e~l~l~~~G  165 (166)
T d1llua2         107 FGQAIGMARRGGTIALVGLPPGD------FPTPIFDVVLKGLHIAGSIVGT-----RADLQEALDFAGEG  165 (166)
T ss_dssp             HHHHHTTEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCcEEEEEEecCCC------ccCCHHHHHhCCcEEEEEeecC-----HHHHHHHHHHHHCc
Confidence            57899999999999999975542      2567888999999999998754     45688999999988

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=7.4e-09  Score=63.53  Aligned_cols=61  Identities=11%  Similarity=0.249  Sum_probs=49.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCcee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLV   74 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~   74 (109)
                      ++.++++++++|+++++|..+..      .++++..++.|++++.|++.  +.    +.++++++++++|+|+
T Consensus       111 ~~~a~~~~~~gG~iv~~G~~~~~------~~~~~~~~~~k~l~i~Gs~~--~~----~~~~~al~li~~gkid  171 (171)
T d1pl8a2         111 IQAGIYATRSGGTLVLVGLGSEM------TTVPLLHAAIREVDIKGVFR--YC----NTWPVAISMLASKSVN  171 (171)
T ss_dssp             HHHHHHHSCTTCEEEECSCCCSC------CCCCHHHHHHTTCEEEECCS--CS----SCHHHHHHHHHTTSCC
T ss_pred             HHHHHHHhcCCCEEEEEecCCCC------CccCHHHHHHCCcEEEEEeC--CH----hHHHHHHHHHHcCCCC
Confidence            67899999999999999986542      25778889999999999873  32    2467888899999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.74  E-value=6.5e-09  Score=64.49  Aligned_cols=67  Identities=18%  Similarity=0.147  Sum_probs=51.0

Q ss_pred             CHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceeee
Q 033914            1 MLDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVYV   76 (109)
Q Consensus         1 ~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~~   76 (109)
                      .+++++++|+++||++.||..+++     ..++++..++.|++++.|+.....+   ++...++++.++ |+|+|+
T Consensus       110 ~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~Gv~~~~~~---~~~~~~~~~~la-g~lkP~  176 (176)
T d1xa0a2         110 TLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCP---MDLRLRIWERLA-GDLKPD  176 (176)
T ss_dssp             THHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCC---HHHHHHHHHHHH-TTTCCC
T ss_pred             hHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEEEeCCcCC---HHHHHHHHHHHh-cccCCC
Confidence            478899999999999999998764     2357788999999999997543222   345566666764 888874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.65  E-value=2.2e-08  Score=61.11  Aligned_cols=59  Identities=15%  Similarity=0.261  Sum_probs=46.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++|+++++|..+..      .++++..++.|++++.|++.  +.+    .++++++|+++||
T Consensus       112 ~~~a~~~~~~~G~iv~~G~~~~~------~~~~~~~~~~k~i~i~gs~~--~~~----~~~~ai~li~~Gk  170 (170)
T d1e3ja2         112 ITIGINITRTGGTLMLVGMGSQM------VTVPLVNACAREIDIKSVFR--YCN----DYPIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHSCTTCEEEECSCCSSC------CCCCHHHHHTTTCEEEECCS--CSS----CHHHHHHHHHTTS
T ss_pred             HHHHHHHHhcCCceEEEecCCCC------CCcCHHHHHHCCCEEEEEEC--CHH----HHHHHHHHHHcCC
Confidence            57899999999999999976541      24678889999999999864  222    3567788999986

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=1.5e-08  Score=62.01  Aligned_cols=62  Identities=15%  Similarity=0.204  Sum_probs=47.4

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCce
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKL   73 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l   73 (109)
                      ++.++++++++|+++++|..++.     ...++...++.|++++.|++.++     +++++++++++++++|
T Consensus       107 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~l~~k~~~i~Gs~~~~-----~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         107 LDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGSMIGG-----IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC-----HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCEEEEeccCCCC-----cccccHHHHHHCCcEEEEEeecC-----HHHHHHHHHHHHHcCC
Confidence            67899999999999999986652     12356778899999999998765     4568899999998775

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.6e-08  Score=60.00  Aligned_cols=60  Identities=17%  Similarity=0.078  Sum_probs=45.5

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G   71 (109)
                      ++.++++++++||++.||..+.       .++++..++.|++++.|+++++..   ++.++++++++++|
T Consensus       110 ~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~~~~---~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         110 LSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSST---KEEFQQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCC---HHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEecCCC---HHHHHHHHHHHHHH
Confidence            5788999999999999997443       246677889999999999865442   45566666666654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.46  E-value=1.5e-08  Score=62.25  Aligned_cols=60  Identities=10%  Similarity=0.117  Sum_probs=39.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHH
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRA   67 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~   67 (109)
                      +++++++++++||++.||..++.     ..++++..++.|++++.|++++++.+ .++.+++.+.+
T Consensus       103 ~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~~~~~-~~~~~~~~~~~  162 (171)
T d1iz0a2         103 VEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPLLR-EGALVEEALGF  162 (171)
T ss_dssp             HHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHHTT-CHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCcChhh-hHHHHHHHHHH
Confidence            67899999999999999987763     12466778899999999998876543 23344444333

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.46  E-value=3.9e-08  Score=60.89  Aligned_cols=65  Identities=17%  Similarity=0.285  Sum_probs=47.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDF-YHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~G   71 (109)
                      ++.++++++++||++.||..++++     .+.++..++.|++++.|++.... .++..+.++++.+.+.++
T Consensus       109 ~~~~l~~l~~~Griv~~G~~~~~~-----~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~L~~~l~~~  174 (177)
T d1o89a2         109 LAKVLAQMNYGGCVAACGLAGGFT-----LPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPES  174 (177)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCSC-----CCCCSHHHHHHCCEEEECCSSSCCHHHHHHHHHHHHHHSCHH
T ss_pred             HHHHHHHhccccceEeecccCCcc-----ccccHHHHHHCCCeEEEEecccCCHHHHHHHHHHHHHhcccc
Confidence            678999999999999999988742     24667889999999999865433 234445566666655443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.46  E-value=6.5e-08  Score=59.35  Aligned_cols=65  Identities=14%  Similarity=0.117  Sum_probs=47.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCceee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGKLVY   75 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~l~~   75 (109)
                      +++++++|+++||+++||..++.     ..++++..++.|++++.|+.....+   .+...++++.++ +.|+|
T Consensus       103 ~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~~~---~~~~~~~~~~l~-~~L~P  167 (167)
T d1tt7a2         103 LASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCP---MDVRAAVWERMS-SDLKP  167 (167)
T ss_dssp             HHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCC---HHHHHHHHHHTT-TTSCC
T ss_pred             HHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCCCC---HHHHHHHHHHHH-hcCCC
Confidence            67899999999999999998874     2356788899999999998654332   234455555654 45665

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.36  E-value=9.6e-08  Score=58.74  Aligned_cols=71  Identities=14%  Similarity=0.203  Sum_probs=52.2

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccc----cchHHHHHHHHHHHHcCceeeee
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFY----HQYPKFLELVMRAIKEGKLVYVE   77 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~G~l~~~~   77 (109)
                      ++.++++++++||++.+|..++..    ..+.+ ...+.|++++.++......    ..+++.++++++++++|+|+|..
T Consensus       107 ~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         107 IQRGVQILAPGGRFIELGKKDVYA----DASLG-LAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHHHHTEEEEEEEEECSCGGGTT----TCEEE-GGGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHhcCCCEEEEEccCCCCC----Ccccc-hHHHhCCcEEEEEEccceeccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            578999999999999999877642    11222 2345789999998754332    23457789999999999999853

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=98.27  E-value=9.2e-07  Score=54.30  Aligned_cols=62  Identities=16%  Similarity=0.100  Sum_probs=46.4

Q ss_pred             HHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++ |+++++|...+.      .++++..++. +.++.|++++++.  .++++.++++++++||
T Consensus       112 ~~~a~~~~~~g~G~~v~vG~~~~~------~~i~~~~~~~-~k~i~Gs~~Gs~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         112 LKAAVDCTVLGWGSCTVVGAKVDE------MTIPTVDVIL-GRSINGTFFGGWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHTBCTTTCEEEECCCSSSE------EEEEHHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhhcCCeEEEecCCCCCc------cccchHHHhc-cCEEEEEEeeCCC--hHHHHHHHHHHHHCcC
Confidence            57899999996 999999985541      2355555543 5689999887654  3567889999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.25  E-value=5.4e-07  Score=55.45  Aligned_cols=61  Identities=15%  Similarity=0.099  Sum_probs=44.8

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHhhcceeeeeeeecccccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNL-MQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~-~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G   71 (109)
                      ++.++++++++||++++|.....   .+ .+.+. ..++.|++++.|++.++     +..+.+++++++++
T Consensus       114 ~~~a~~~l~~~G~iv~~G~~~~~---~~-~~~~~~~~l~~k~l~i~G~~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         114 LLEGSELLRRGGFYSVAGVAVPQ---DP-VPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHEEEEEEEEECCCCSCC---CC-EEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCEEEEEeecCCC---Cc-cccccHHHHHHCCcEEEEEEeCC-----HHHHHHHHHHHHHC
Confidence            57889999999999999975432   11 23333 45788999999998754     34577778888875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.12  E-value=2e-06  Score=52.64  Aligned_cols=63  Identities=13%  Similarity=0.072  Sum_probs=44.0

Q ss_pred             HHHHHHhhcc-CCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRI-RGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~-~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++.++++ +|+++++|.....    ...+++. .++.++.+++|++++++.   ++++.++++|+++||
T Consensus       111 ~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~-~~~~~~~~i~Gs~~G~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         111 MMNALQSTYCGSGVTVVLGLASPN----ERLPLDP-LLLLTGRSLKGSVFGGFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             HHHHHHTBCTTTCEEEECCCCCTT----CCEEECT-HHHHTTCEEEECSGGGCC---GGGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhcCceEEEEEecCc----cccccCH-HHHhCCCEEEEEEeCCCC---HHHHHHHHHHHHcCC
Confidence            3567777776 5999999985531    1123333 345578899999887653   346788999999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.90  E-value=1.5e-05  Score=48.40  Aligned_cols=65  Identities=8%  Similarity=-0.036  Sum_probs=44.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++.+++++|+.++++......   . ...+...++.+++++.|++++++.  .++++.++++++++||
T Consensus       112 ~~~a~~~~~~~~g~~~~~~~~~~~---~-~~~~~~~~~~~~~~i~Gs~~G~~~--~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         112 MVTALSCCQEAYGVSVIVGVPPDS---Q-NLSMNPMLLLSGRTWKGAIFGGFK--SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHBCTTTCEEEECSCCCTT---C-CEEECTHHHHTTCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhcCCcceEEecCCCCc---c-cccccHHHHhCCCEEEEEEEeCCC--HHHHHHHHHHHHHCcC
Confidence            467888999986665655434321   1 122334577799999999877653  3567889999999986

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.90  E-value=1.7e-05  Score=48.06  Aligned_cols=64  Identities=11%  Similarity=-0.039  Sum_probs=43.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++.+++++|.+++++...+.     ....+...++.++.++.|++.+++.  .++++.++++|+++||
T Consensus       112 ~~~a~~~~~~g~~~~~~~g~~~~-----~~~~~~~~~~~~~~~i~Gs~~G~~~--~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         112 MRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQLIAGRTWKGSMFGGFK--GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHHHTTCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhhCCCcceeEEEecCC-----cccCccHHHHHCCcEEEEEEEeCCc--HHHHHHHHHHHHHcCC
Confidence            45677887887655554433331     1134456677889999999877653  3568889999999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.81  E-value=2.5e-05  Score=47.20  Aligned_cols=65  Identities=8%  Similarity=-0.050  Sum_probs=46.3

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      ++.++.+++++|++++++......   . ...+....+.++.++.|++.+++.  ..+++.++++++++||
T Consensus       112 ~~~~~~~~~~g~~~~~v~~~~~~~---~-~~~~~~~~~~~~~~i~Gs~~G~~~--~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         112 MRAALEACHKGWGVSVVVGVAASG---E-EIATRPFQLVTGRTWKGTAFGGWK--SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCCTT---C-CEEECTHHHHTTCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHhhcCCceeEEEEeecccc---c-cccccHHHHHCCCEEEEEeeeCCc--HHHHHHHHHHHHHcCC
Confidence            467888999999998876544321   1 122334456788999999877653  3567889999999986

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.72  E-value=1.5e-05  Score=48.59  Aligned_cols=65  Identities=9%  Similarity=-0.115  Sum_probs=43.6

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++|+++++|...... ..+...++ .....+++++.|...+.+    +..++++.+++++||
T Consensus       110 ~~~a~~~~~~~G~iv~~G~~~~~~-~~~~~~~~-~~~~~~~~~i~g~~~~~~----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         110 LSQAVKMVKPGGIISNINYHGSGD-ALLIPRVE-WGCGMAHKTIKGGLCPGG----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHEEEEEEEEECCCCCSSS-EEEEETTT-TGGGTBCCEEEEBCCCCH----HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhcCCEEEEEeecCCCC-cCcCcHhH-HHHHhCccEEEEecCCCC----cccHHHHHHHHHcCC
Confidence            678999999999999999755321 00100111 124558889999876542    345677889999886

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.32  E-value=0.00029  Score=43.47  Aligned_cols=66  Identities=15%  Similarity=0.102  Sum_probs=43.7

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCC-------CccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHcCc
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEK-------SEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIKEGK   72 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~-------~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~~G~   72 (109)
                      +++++++++++||++++|...+.....       ....+++..++.|++++.+-..     ....++.++++++.++|
T Consensus       123 l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         123 LNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             HHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCceeeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            678999999999999999865432100       0112345566778888765221     13456788999998875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.00024  Score=42.85  Aligned_cols=65  Identities=14%  Similarity=0.041  Sum_probs=40.9

Q ss_pred             HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHhhc-ceeeeeeeeccc---ccchHHHHHHHHHHHHcC
Q 033914            2 LDAVRLNMRIRGRIAVCGMISQYNLEKSEGVHNLMQVVGK-RIRMEGFLAGDF---YHQYPKFLELVMRAIKEG   71 (109)
Q Consensus         2 ~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~~~~~~k-~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~G   71 (109)
                      ++.++++++++||++++|..++..     .+.+...+..+ .+.+.+..+..+   .+++.+.+.++++|+++|
T Consensus       110 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         110 WERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCeeeecccccCCc-----cccchhhhhccceEEEEeeEEeeecCCHHHHHHHHHHHHHHHHCc
Confidence            578899999999999999877642     12333333332 333333222221   234566778899999988

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.00  E-value=0.00058  Score=41.35  Aligned_cols=60  Identities=8%  Similarity=0.002  Sum_probs=38.3

Q ss_pred             HHHHHhhccC-CeEEEEccccccCCCCCccccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHH
Q 033914            3 DAVRLNMRIR-GRIAVCGMISQYNLEKSEGVHNLMQVVGKRIRMEGFLAGDFYHQYPKFLELVMRAIK   69 (109)
Q Consensus         3 ~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~~~~~~k~~~~~G~~~~~~~~~~~~~~~~~~~~~~   69 (109)
                      +.++.++.++ |+++++|.....    ...++++ .++.++.+++|++.++..  .++++.++++++.
T Consensus       114 ~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~-~~~~~~~~i~Gs~~G~~~--~~~dip~li~~~~  174 (176)
T d1d1ta2         114 IDALASCHMNYGTSVVVGVPPSA----KMLTYDP-MLLFTGRTWKGCVFGGLK--SRDDVPKLVTEFL  174 (176)
T ss_dssp             HHHHTTSCTTTCEEEECSCCCTT----CCEEECT-HHHHTTCEEEECSGGGCC--HHHHHHHHHHHHT
T ss_pred             HHHHHHhhcCCeEEEEEEccccc----cccCCCH-HHHhCCCEEEEEEEeCCC--cHHHHHHHHHHHh
Confidence            4556666555 999999986542    1112333 345578899999877653  2456777776654