Citrus Sinensis ID: 034333

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIKKR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHcccccHccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHcccccHcHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mqdktfehpylqaigshtnywrdeDTALFILKHLyrdipedpnspmesggdnskgesgstgwsdqreyaeeelpltfsdRAVVRSFSRRAKKFIKKR
Flexible Loop (DISEMBL)
mqdktfehpylqaigshtnywrDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGSTGWSDQREYAEeelpltfsdravvrsFSRRAKKFIKKR
Low Complexity Region (SEG)
MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIKKR
Disordered region (IsUnstruct)
*******HPYLQAIGSHTNYWRDEDTALFILKHLYRDI***********************************************************
Disordered Region (DISOPRED)
*******HPYLQAIGSHTNYWRDEDTALFILKHLYRD************************WSDQREYAEEELPLTFSDRAVVRSFSR***KF****
Disordered Region (DISEMBL)
********PYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDP*************************YAEEELPLTFSDRAVVRSFSRR********
Disordered Region (DISPRO)
****TFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPE*************************REYAEEELPLTFSDRAVVRSFSRRAKKFIKK*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIKKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
Q9Y6Y8	1000	SEC23-interacting protein	yes	no	0.463	0.045	0.446	0.0006
Q6NZC7	998	SEC23-interacting protein	yes	no	0.463	0.045	0.446	0.0007

>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 1   MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
           +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct: 952 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 998

Plays a role in the organization of endoplasmic reticulum exit sites.
Homo sapiens (taxid: 9606)

>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 1   MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
           +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct: 950 LQEKPIESFNEYLFALQSHLCYWGSEDTALLLLKEIYRTMNISPEQP 996

Plays a role in the organization of endoplasmic reticulum exit sites.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
255569112	923	conserved hypothetical protein [Ricinus	0.979	0.102	0.778	3e-37
225460119	963	PREDICTED: uncharacterized protein LOC10	0.979	0.098	0.705	4e-35
224135773	929	predicted protein [Populus trichocarpa]	0.979	0.102	0.726	3e-34
224146261	905	predicted protein [Populus trichocarpa]	0.969	0.103	0.715	7e-34
147820358	495	hypothetical protein VITISV_025999 [Viti	0.979	0.191	0.578	3e-31
12597839	481	hypothetical protein [Arabidopsis thalia	0.989	0.199	0.65	2e-30
356529907	914	PREDICTED: phospholipase DDHD1-like [Gly	0.989	0.105	0.656	4e-30
22329893	933	protein shoot gravitropism 2 (SGR2) [Ara	0.989	0.102	0.65	4e-30
12322534	869	unknown protein [Arabidopsis thaliana]	0.989	0.110	0.65	5e-30
297851926	937	hypothetical protein ARALYDRAFT_473628 [	0.989	0.102	0.65	6e-30

>gi|255569112|ref|XP_002525525.1| conserved hypothetical protein [Ricinus communis] gi|223535204|gb|EEF36883.1| conserved hypothetical protein [Ricinus communis]

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 83/95 (87%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGST 60
           +QDKTFEHPYLQAIGSHTNYWRD DTALFILKHLY+DIPE+ N   ES G NSK ES +T
Sbjct: 828 LQDKTFEHPYLQAIGSHTNYWRDLDTALFILKHLYKDIPEEANLLDESSGQNSKDESSTT 887

Query: 61  GWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95
           GWSDQRE  EEELPLTFSDR ++R+FSR+AKKF+K
Sbjct: 888 GWSDQRETKEEELPLTFSDRMMIRNFSRKAKKFMK 922

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460119|ref|XP_002275612.1| PREDICTED: uncharacterized protein LOC100260107 [Vitis vinifera] gi|297741004|emb|CBI31316.3| unnamed protein product [Vitis vinifera]

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 67/95 (70%), Positives = 84/95 (88%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGST 60
           +QDKTFEH Y+ AIG+HTNYWRD DTALFILKHLYRDIPE+P+S  E+ G +SK E+GST
Sbjct: 868 LQDKTFEHAYISAIGAHTNYWRDYDTALFILKHLYRDIPEEPSSSEEANGGSSKNENGST 927

Query: 61  GWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95
           GW+DQRE A+EELPLTF++R V+R+FSR+AKK ++
Sbjct: 928 GWTDQREAADEELPLTFAERVVIRNFSRKAKKIMQ 962

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135773|ref|XP_002327300.1| predicted protein [Populus trichocarpa] gi|222835670|gb|EEE74105.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 79/95 (83%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGST 60
           +QDKTF+HPYLQAIG+HTNYWRD DTALFILKHLYR+IPEDP    ES G  SK + GST
Sbjct: 833 LQDKTFKHPYLQAIGAHTNYWRDHDTALFILKHLYREIPEDPILHTESSGGTSKDKIGST 892

Query: 61  GWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95
           GW D  E AEEELPLTFSDR + R+FSR+AKK++K
Sbjct: 893 GWYDNSEAAEEELPLTFSDRMMARNFSRKAKKYMK 927

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146261|ref|XP_002325941.1| predicted protein [Populus trichocarpa] gi|222862816|gb|EEF00323.1| predicted protein [Populus trichocarpa]

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGST 60
           +QDKTFEHPYLQAIG+HTNYWRD DTALFILKHLYR+IPE+PN P ES G  SK E GST
Sbjct: 808 LQDKTFEHPYLQAIGAHTNYWRDHDTALFILKHLYREIPEEPNLPAESSGGTSKDEIGST 867

Query: 61  GWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95
           GW DQ E   EELPLTFSDR + ++FS++A K++K
Sbjct: 868 GWYDQSE-TNEELPLTFSDRMMAKNFSKKANKYMK 901

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147820358|emb|CAN69835.1| hypothetical protein VITISV_025999 [Vitis vinifera]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 19/114 (16%)

Query: 1   MQDKTFEHPYLQAIGSHT-------------------NYWRDEDTALFILKHLYRDIPED 41
           +QDKTFEH Y+ AIG+HT                   NYWRD DTALFILKHLYRDIPE+
Sbjct: 381 LQDKTFEHAYISAIGAHTTVIYMLIALPSGRYLVVCRNYWRDYDTALFILKHLYRDIPEE 440

Query: 42  PNSPMESGGDNSKGESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95
           P+S  E+ G +SK E+GSTGW+DQRE A+EELPLTF++R V+ +FSR+AKK ++
Sbjct: 441 PSSSEEANGGSSKNENGSTGWTDQREAADEELPLTFAERVVIXNFSRKAKKIMQ 494

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12597839|gb|AAG60149.1|AC074360_14 hypothetical protein [Arabidopsis thaliana]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 80/100 (80%), Gaps = 4/100 (4%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMES--GGDNSKGESG 58
           +Q+KTFEHPYLQAIG+HTNYWRD+DTALFI+KHLYR++P+ PNSP ES  G D+ K  S 
Sbjct: 381 LQEKTFEHPYLQAIGAHTNYWRDQDTALFIIKHLYRELPDGPNSPTESTEGDDSPKDSSR 440

Query: 59  STGWSDQRE--YAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
              W D+RE  Y +EELPLTFSD+ + RSFS  AKK++KK
Sbjct: 441 PHSWIDRREADYDDEELPLTFSDKQITRSFSAEAKKYLKK 480

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529907|ref|XP_003533528.1| PREDICTED: phospholipase DDHD1-like [Glycine max]

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 76/96 (79%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMESGGDNSKGESGST 60
           +QDKTFEHPYLQAIG+HTNYWRD DTALFILKHLY +IPED +  +   GDNSK ES S 
Sbjct: 813 LQDKTFEHPYLQAIGAHTNYWRDYDTALFILKHLYGEIPEDSDLLVGFTGDNSKSESTSV 872

Query: 61  GWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
            W + R+  EE+LPLTFSD+ + RSFS +AKK ++K
Sbjct: 873 SWYEPRDTVEEDLPLTFSDKVMARSFSSKAKKVLQK 908

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329893|ref|NP_174433.2| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana] gi|16904659|dbj|BAB71959.1| shoot gravitropism 2 [Arabidopsis thaliana] gi|332193239|gb|AEE31360.1| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 80/100 (80%), Gaps = 4/100 (4%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMES--GGDNSKGESG 58
           +Q+KTFEHPYLQAIG+HTNYWRD+DTALFI+KHLYR++P+ PNSP ES  G D+ K  S 
Sbjct: 833 LQEKTFEHPYLQAIGAHTNYWRDQDTALFIIKHLYRELPDGPNSPTESTEGDDSPKDSSR 892

Query: 59  STGWSDQRE--YAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
              W D+RE  Y +EELPLTFSD+ + RSFS  AKK++KK
Sbjct: 893 PHSWIDRREADYDDEELPLTFSDKQITRSFSAEAKKYLKK 932

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322534|gb|AAG51263.1|AC027135_4 unknown protein [Arabidopsis thaliana]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 80/100 (80%), Gaps = 4/100 (4%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMES--GGDNSKGESG 58
           +Q+KTFEHPYLQAIG+HTNYWRD+DTALFI+KHLYR++P+ PNSP ES  G D+ K  S 
Sbjct: 769 LQEKTFEHPYLQAIGAHTNYWRDQDTALFIIKHLYRELPDGPNSPTESTEGDDSPKDSSR 828

Query: 59  STGWSDQRE--YAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
              W D+RE  Y +EELPLTFSD+ + RSFS  AKK++KK
Sbjct: 829 PHSWIDRREADYDDEELPLTFSDKQITRSFSAEAKKYLKK 868

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851926|ref|XP_002893844.1| hypothetical protein ARALYDRAFT_473628 [Arabidopsis lyrata subsp. lyrata] gi|297339686|gb|EFH70103.1| hypothetical protein ARALYDRAFT_473628 [Arabidopsis lyrata subsp. lyrata]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 4/100 (4%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMES--GGDNSKGESG 58
           +Q+KTFEHPYLQAIG+HTNYWRD+DTALFI+KHLYR++P+ PNSP ES  G D  K  S 
Sbjct: 837 LQEKTFEHPYLQAIGAHTNYWRDQDTALFIIKHLYRELPDGPNSPTESTEGDDRPKDSSR 896

Query: 59  STGWSDQRE--YAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
              W D+RE  Y +EELPLTFSD+ + RSFS  AKK++KK
Sbjct: 897 PHSWIDRRETDYDDEELPLTFSDKQIARSFSAEAKKYLKK 936

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
TAIR|locus:2028641	933	SGR2 "SHOOT GRAVITROPISM 2" [A	0.989	0.102	0.65	5e-31
UNIPROTKB|I3LNP5	135	I3LNP5 "Uncharacterized protei	0.474	0.340	0.437	5.5e-06
RGD|1309328	206	Sec23ip "SEC23 interacting pro	0.463	0.218	0.446	1.8e-05
UNIPROTKB|F5H0L8	789	SEC23IP "SEC23-interacting pro	0.463	0.057	0.446	0.00017
UNIPROTKB|G3V8Q8	999	Sec23ip "Protein Sec23ip" [Rat	0.463	0.045	0.446	0.00023
UNIPROTKB|Q9Y6Y8	1000	SEC23IP "SEC23-interacting pro	0.463	0.045	0.446	0.00023
UNIPROTKB|E1BKW5	1004	SEC23IP "Uncharacterized prote	0.463	0.044	0.446	0.00023
UNIPROTKB|F1PQ80	1005	SEC23IP "Uncharacterized prote	0.463	0.044	0.446	0.00023
MGI|MGI:2450915	998	Sec23ip "Sec23 interacting pro	0.463	0.045	0.446	0.00038
UNIPROTKB|H0YE64	79	DDHD2 "Phospholipase DDHD2" [H	0.371	0.455	0.447	0.00045

TAIR|locus:2028641 SGR2 "SHOOT GRAVITROPISM 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 5.0e-31, P = 5.0e-31
 Identities = 65/100 (65%), Positives = 80/100 (80%)

Query:     1 MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPMES--GGDNSKGESG 58
             +Q+KTFEHPYLQAIG+HTNYWRD+DTALFI+KHLYR++P+ PNSP ES  G D+ K  S 
Sbjct:   833 LQEKTFEHPYLQAIGAHTNYWRDQDTALFIIKHLYRELPDGPNSPTESTEGDDSPKDSSR 892

Query:    59 STGWSDQRE--YAEEELPLTFSDRAVVRSFSRRAKKFIKK 96
                W D+RE  Y +EELPLTFSD+ + RSFS  AKK++KK
Sbjct:   893 PHSWIDRREADYDDEELPLTFSDKQITRSFSAEAKKYLKK 932

GO:0005737 "cytoplasm" evidence=ISM

GO:0046872 "metal ion binding" evidence=IEA

GO:0009630 "gravitropism" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0008970 "phosphatidylcholine 1-acylhydrolase activity" evidence=ISS

GO:0009660 "amyloplast organization" evidence=IMP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009590 "detection of gravity" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|I3LNP5 I3LNP5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSPM 46
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P+
Sbjct:    87 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPL 134

GO:0046872 "metal ion binding" evidence=IEA

RGD|1309328 Sec23ip "SEC23 interacting protein" [Rattus norvegicus (taxid:10116)]

 Score = 103 (41.3 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   158 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 204

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

UNIPROTKB|F5H0L8 SEC23IP "SEC23-interacting protein" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   741 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 787

GO:0046872 "metal ion binding" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|G3V8Q8 Sec23ip "Protein Sec23ip" [Rattus norvegicus (taxid:10116)]

 Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   951 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 997

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q9Y6Y8 SEC23IP "SEC23-interacting protein" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   952 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 998

GO:0046872 "metal ion binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=TAS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=TAS

GO:0006886 "intracellular protein transport" evidence=TAS

GO:0007030 "Golgi organization" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|E1BKW5 SEC23IP "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   956 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 1002

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1PQ80 SEC23IP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   957 LQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 1003

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:2450915 Sec23ip "Sec23 interacting protein" [Mus musculus (taxid:10090)]

 Score = 101 (40.6 bits), Expect = 0.00038, P = 0.00038
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDPNSP 45
             +Q+K  E  + YL A+ SH  YW  EDTAL +LK +YR +   P  P
Sbjct:   950 LQEKPIESFNEYLFALQSHLCYWGSEDTALLLLKEIYRTMNISPEQP 996

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|H0YE64 DDHD2 "Phospholipase DDHD2" [Homo sapiens (taxid:9606)]

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query:     1 MQDKTFE--HPYLQAIGSHTNYWRDEDTALFILKHLYR 36
             +Q+K  E  + YL A+ SH  YW  EDT L +LK +Y+
Sbjct:    31 LQEKPIESFNEYLFALQSHLCYWESEDTVLLVLKEIYQ 68

GO:0046872 "metal ion binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	97
pfam02862	219	pfam02862, DDHD, DDHD domain	1e-11

>gnl|CDD|217255 pfam02862, DDHD, DDHD domain

 Score = 57.8 bits (140), Expect = 1e-11
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 1   MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYR 36
           +Q+   E+ YL A+ SH +YW  ED ALF+LK + R
Sbjct: 184 LQEGVLENQYLSALSSHVSYWESEDVALFLLKEILR 219

The DDHD domain is 180 residues long and contains four conserved residues that may form a metal binding site. The domain is named after these four residues. This pattern of conservation of metal binding residues is often seen in phosphoesterase domains. This domain is found in retinal degeneration B proteins, as well as a family of probable phospholipases. It has been shown that this domain is found in a longer C terminal region that binds to PYK2 tyrosine kinase. These proteins have been called N-terminal domain-interacting receptor (Nir1, Nir2 and Nir3). This suggests that this region is involved in functionally important interactions in other members of this family. Length = 219

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
PF02862	227	DDHD: DDHD domain; InterPro: IPR004177 The DDHD do	99.58
KOG2308	741	consensus Phosphatidic acid-preferring phospholipa	98.92

>PF02862 DDHD: DDHD domain; InterPro: IPR004177 The DDHD domain is 180 residues long and contains four conserved residues that may form a metal binding site

Probab=99.58  E-value=8.3e-16  Score=112.09  Aligned_cols=36  Identities=53%  Similarity=1.003  Sum_probs=35.0

Q ss_pred             CCCccccchhHHHhhhhhhccccchhHHHHHHHHhh
Q 034333            1 MQDKTFEHPYLQAIGSHTNYWRDEDTALFILKHLYR   36 (97)
Q Consensus         1 LQE~~~En~YL~AltSHt~YW~s~DtALFILk~lY~   36 (97)
                      |||+.+||+||+||+||++||+|.|||+|||++||+
T Consensus       192 Lq~~~~~~~yl~~l~sH~sYW~s~Dva~Fil~~l~~  227 (227)
T PF02862_consen  192 LQEGVLENSYLSALTSHFSYWESKDVALFILKQLYR  227 (227)
T ss_pred             cCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHhC
Confidence            799999999999999999999999999999999985

The domain is named after these four residues. This pattern of conservation of metal binding residues is often seen in phosphoesterase domains. This domain is found in retinal degeneration B proteins, as well as a family of probable phospholipases.; GO: 0046872 metal ion binding

>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.92  E-value=5.1e-10  Score=98.96  Aligned_cols=42  Identities=43%  Similarity=0.821  Sum_probs=40.2

Q ss_pred             CCCcccc--c-hhHHHhhhhhhccccchhHHHHHHHHhhcCCCCC
Q 034333            1 MQDKTFE--H-PYLQAIGSHTNYWRDEDTALFILKHLYRDIPEDP   42 (97)
Q Consensus         1 LQE~~~E--n-~YL~AltSHt~YW~s~DtALFILk~lY~~~~~~p   42 (97)
                      +||+++|  | +||+|++||+|||.|+|+|+|+|++||.++++.+
T Consensus       691 ~~e~~~e~~~~eylsa~sshs~yW~s~d~a~fl~~e~y~~~~~s~  735 (741)
T KOG2308|consen  691 FQEAPIESSNLEYLSALSSHSEYWSSEDLALFLLTELYRSFGISN  735 (741)
T ss_pred             ccccchhhhhHHHHhhhcccccceecchhHHHHHHHHHHhccccc
Confidence            6999999  8 9999999999999999999999999999998876

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00