Citrus Sinensis ID: 034392

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAPVAQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEcccccccccEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccEEEccccccccHHHEcccccc
Coil and Loop (DISEMBL)
mgrgvssgggqsslgylfsdgeaqnnaptqkpapvaqpvditkqlpaginstsmnnymradgqntgnfitdrpstkvhaapgggsslgylfgggsn
Flexible Loop (DISEMBL)
mgrgvssgggqSSLGYLFSDGEAQNNAPtqkpapvaqpvDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPstkvhaapgggsslgylfgggsn
Low Complexity Region (SEG)
MgrgvssgggqsslgYLFSDGEAQNNAPTQKPAPVAQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPgggsslgylfgggsN
Disordered region (IsUnstruct)
************************************************************************************************
Disordered Region (DISOPRED)
*******GGGQSSLGYLF******************************************DGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGG***
Disordered Region (DISEMBL)
**********QSSLGYLFSDGEAQNNAPTQKPAPVAQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN
Disordered Region (DISPRO)
*****************************************************MNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSL*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAPVAQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
B3H4F1	113	Protein SPIRAL1-like 1 OS	yes	no	0.979	0.831	0.663	6e-32
Q9LE54	110	Protein SPIRAL1-like 2 OS	no	no	1.0	0.872	0.663	2e-31
Q2QQ99	101	Protein SPIRAL1-like 3 OS	yes	no	0.791	0.752	0.626	1e-21
Q9SJW3	119	Protein SPIRAL1 OS=Arabid	no	no	0.968	0.781	0.512	3e-21
Q7Y1L9	116	Protein SPIRAL1-like 1 OS	no	no	0.572	0.474	0.839	4e-19
Q2R0W8	115	Protein SPIRAL1-like 2 OS	no	no	0.531	0.443	0.823	2e-18
Q9LF22	127	Protein SPIRAL1-like 4 OS	no	no	0.947	0.716	0.491	7e-18
Q9S7P8	122	Protein SPIRAL1-like 3 OS	no	no	0.937	0.737	0.463	7e-15
Q8LGD1	99	Protein SPIRAL1-like 5 OS	no	no	0.416	0.404	0.75	2e-11
Q7XQ83	127	Protein SPIRAL1-like 4 OS	no	no	0.791	0.598	0.336	0.0006

>sp|B3H4F1|SP1L1_ARATH Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 16/110 (14%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAP----------------VAQPVDITKQ 44
           MGRGVS GGGQSSLGYLF  GEA   A    PAP                 AQ V++TKQ
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 45  LPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
           +PAGIN +S NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGGG
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGG 110

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LE54|SP1L2_ARATH Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 78/110 (70%), Gaps = 14/110 (12%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKP--------------APVAQPVDITKQLP 46
           MGRGVS+GGGQSSLGYLF  GEA   A   K               A  A  VD  KQ+P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 47  AGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           AG+NS S NNYMRA+GQNTGNFITDRPSTKVH+APGGGSSL YLFGGGSN
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2QQ99|SP1L3_ORYSJ Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 7/83 (8%)

Query: 16 YLFSDGEAQNNAPTQKPAPVAQPV-----DITKQLPAGINSTSMNNYMRADGQNTGNFIT 70
          YLF  GEA  +A  +KPAPV +P      +  K++PAGI S+  NNYMRA+GQN GNF+T
Sbjct: 16 YLFGGGEAPKSA--EKPAPVQKPAPSSSAEKLKEIPAGIQSSKANNYMRAEGQNCGNFLT 73

Query: 71 DRPSTKVHAAPGGGSSLGYLFGG 93
          DRPSTKV AAPGGGSSL YLF G
Sbjct: 74 DRPSTKVQAAPGGGSSLDYLFSG 96

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SJW3|SPR1_ARATH Protein SPIRAL1 OS=Arabidopsis thaliana GN=SPR1 PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 68/119 (57%), Gaps = 26/119 (21%)

Query: 1   MGRGVSSGGGQSSLGYLF--------------SDGEAQNNAPT-----------QKPAPV 35
           MGRG S GGGQSSL YLF                    NN P                  
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 36  AQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
            +P ++ KQ+PAGI  T +NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSL YLF GG
Sbjct: 61  VEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGG 118

Required for directional control of cell elongation. Stabilizes growing ends of cortical microtubules and influences their dynamic properties. Acts redundantly with SP1Ls in maintaining the cortical microtubules organization essential for anisotropic cell growth. Plays a key role in salt stress-induced microtubules disassembly.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7Y1L9|SP1L1_ORYSJ Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 49/56 (87%), Gaps = 1/56 (1%)

Query: 39  VDITKQLPAGIN-STSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGG 93
            D TKQ+PAGI  S S NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSLGYLFGG
Sbjct: 60  ADATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2R0W8|SP1L2_ORYSJ Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 45/51 (88%)

Query: 43  KQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGG 93
           K++PAGI ST  NNY RA GQN GNF+TDRPSTKVHAAPGGGSSLGYLFGG
Sbjct: 64  KEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LF22|SP1L4_ARATH Protein SPIRAL1-like 4 OS=Arabidopsis thaliana GN=SP1L4 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/118 (49%), Positives = 70/118 (59%), Gaps = 27/118 (22%)

Query: 3   RGVSSGGGQSSLGYLFSDGEA--QNNAPTQK-------------PAPVAQP--------- 38
           RGV+SGGG+SSLGYLF  GE+  + N P  K                  +P         
Sbjct: 5   RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTTTTTTDGAGGRPKTTTTTTTT 64

Query: 39  --VDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
              + T++  AG+   S NNY R+DGQN GNF+T+RPSTKVHAAPGGGSSLGYLFG G
Sbjct: 65  GDKNKTEENSAGVRG-SPNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFGSG 121

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7P8|SP1L3_ARATH Protein SPIRAL1-like 3 OS=Arabidopsis thaliana GN=SP1L3 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 20/110 (18%)

Query: 3   RGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAPVA------------QPVDI-------TK 43
           RGV++G  +SSLGYLF  G+  + A                     +P+          K
Sbjct: 5   RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDNK 64

Query: 44  QLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGG 93
           +  AG+   S NNY R++GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 65  KTSAGVRG-SPNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFGG 113

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LGD1|SP1L5_ARATH Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 53 SMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFG 92
          S NNY R  GQN+GNF+TDRP+TKV + PGGGSSLGYLFG
Sbjct: 58 SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFG 97

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XQ83|SP1L4_ORYSJ Protein SPIRAL1-like 4 OS=Oryza sativa subsp. japonica GN=Os04g0578300 PE=3 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 47/110 (42%), Gaps = 34/110 (30%)

Query: 14  LGYLFS-----------------------------DGEAQNNAPTQKPAPVAQPVDITKQ 44
           LGYLF                              D  A + A  +  A  A P+     
Sbjct: 17  LGYLFEPEPEDIIPDHSTKSVQGTNKAPKGNIVLGDKMASDEADQEHQA--AAPLKKEDS 74

Query: 45  LPAGINSTSMNNYMRAD--GQNTGNFITDRPSTKVHAAPGGGSSLGYLFG 92
            P  ++S S +N    +  G N+G  ITDRPST+V  APGG SSLG+LFG
Sbjct: 75  NPI-VSSRSASNIYHTNQVGNNSGLLITDRPSTRVRCAPGGPSSLGFLFG 123

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
9797761	491	Contains similarity to PIR7A protein fro	0.979	0.191	0.663	1e-30
21592628	110	putative nitrilase-associated protein [A	0.979	0.854	0.678	2e-30
186478886	113	protein SPIRAL1-like1 [Arabidopsis thali	0.979	0.831	0.663	3e-30
297841653	110	hypothetical protein ARALYDRAFT_476049 [	1.0	0.872	0.690	3e-30
224098996	113	predicted protein [Populus trichocarpa]	1.0	0.849	0.716	4e-30
15222255	110	protein SPIRAL1-like2 [Arabidopsis thali	1.0	0.872	0.663	1e-29
312282037	117	unnamed protein product [Thellungiella h	0.979	0.803	0.651	2e-29
224141087	107	predicted protein [Populus trichocarpa]	1.0	0.897	0.663	4e-29
169635145	107	putative nitrilase-associated protein [S	0.989	0.887	0.660	4e-29
255585716	107	SP1L, putative [Ricinus communis] gi|223	1.0	0.897	0.654	4e-29

>gi|9797761|gb|AAF98579.1|AC013427_22 Contains similarity to PIR7A protein from Oryza sativa gb|Z34271 and contains an alpha/beta hydrolase fold PF|00561 [Arabidopsis thaliana]

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 16/110 (14%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAP----------------VAQPVDITKQ 44
           MGRGVS GGGQSSLGYLF  GEA   A    PAP                 AQ V++TKQ
Sbjct: 379 MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 438

Query: 45  LPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
           +PAGIN +S NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGGG
Sbjct: 439 IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGG 488

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592628|gb|AAM64577.1| putative nitrilase-associated protein [Arabidopsis thaliana]

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 81/112 (72%), Gaps = 18/112 (16%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNA----------------PTQKPAPVAQPVDITKQ 44
           MGRGVS+GGGQSSLGYLF  GEA   A                PTQ  AP A  VD  KQ
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAPNA--VDSIKQ 58

Query: 45  LPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           +PAG+NS S NNYMRA+GQNTGNFITDRPSTKVH+APGGGSSL YLFGGGSN
Sbjct: 59  VPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLAYLFGGGSN 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478886|ref|NP_001117356.1| protein SPIRAL1-like1 [Arabidopsis thaliana] gi|391359333|sp|B3H4F1.1|SP1L1_ARATH RecName: Full=Protein SPIRAL1-like 1 gi|332192560|gb|AEE30681.1| protein SPIRAL1-like1 [Arabidopsis thaliana]

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 16/110 (14%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKPAP----------------VAQPVDITKQ 44
           MGRGVS GGGQSSLGYLF  GEA   A    PAP                 AQ V++TKQ
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 45  LPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
           +PAGIN +S NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGGG
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGG 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841653|ref|XP_002888708.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata] gi|297334549|gb|EFH64967.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/110 (69%), Positives = 82/110 (74%), Gaps = 14/110 (12%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQ-----NNAPTQK----PAPVAQ-----PVDITKQLP 46
           MGRGVS+GGGQSSLGYLF  GEA      N AP +     PAP  Q      VD  KQ+P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKPSTVNKAPAETQSSAPAPPLQTAAPKAVDSIKQVP 60

Query: 47  AGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           AG+NS S NNYMRA+GQNTGNFITDRPSTKVH+APGGGSSL YLFGGGSN
Sbjct: 61  AGLNSNSTNNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLNYLFGGGSN 110

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098996|ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|118484460|gb|ABK94106.1| unknown [Populus trichocarpa] gi|118485184|gb|ABK94453.1| unknown [Populus trichocarpa] gi|222851167|gb|EEE88714.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 84/113 (74%), Gaps = 17/113 (15%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEA-----------------QNNAPTQKPAPVAQPVDITK 43
           MGRGVS+GGGQSSLGYLF  GEA                  NN P  KPA   QP DI K
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKPGTNNAQAAPSESLPANNPPPSKPAAAPQPADINK 60

Query: 44  QLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           Q+PAGINSTS NNY+RADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN
Sbjct: 61  QVPAGINSTSTNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 113

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222255|ref|NP_177083.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|42572039|ref|NP_974110.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|75173888|sp|Q9LE54.1|SP1L2_ARATH RecName: Full=Protein SPIRAL1-like 2 gi|6730644|gb|AAF27065.1|AC008262_14 F4N2.18 [Arabidopsis thaliana] gi|12325084|gb|AAG52493.1|AC018364_11 putative nitrilase-associated protein; 69823-70365 [Arabidopsis thaliana] gi|88900378|gb|ABD57501.1| At1g69230 [Arabidopsis thaliana] gi|332196777|gb|AEE34898.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|332196778|gb|AEE34899.1| protein SPIRAL1-like2 [Arabidopsis thaliana]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 78/110 (70%), Gaps = 14/110 (12%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQKP--------------APVAQPVDITKQLP 46
           MGRGVS+GGGQSSLGYLF  GEA   A   K               A  A  VD  KQ+P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 47  AGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           AG+NS S NNYMRA+GQNTGNFITDRPSTKVH+APGGGSSL YLFGGGSN
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282037|dbj|BAJ33884.1| unnamed protein product [Thellungiella halophila]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 80/112 (71%), Gaps = 18/112 (16%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQ----NNAPTQK--------------PAPVAQPVDIT 42
           MGRGVS+GGGQSSLGYLF  GEA     NNAP +                    +PVD+T
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKPAVNNAPAETQPAPTPPPPSPAQPKTEAPKPVDVT 60

Query: 43  KQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGG 94
           KQ PAG+NS S NNYMRADGQNTGNF+TDRPSTKVH+APGGGSSL YLFGGG
Sbjct: 61  KQGPAGLNSNSANNYMRADGQNTGNFLTDRPSTKVHSAPGGGSSLDYLFGGG 112

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141087|ref|XP_002323906.1| predicted protein [Populus trichocarpa] gi|222866908|gb|EEF04039.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 76/107 (71%), Gaps = 11/107 (10%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQK-----------PAPVAQPVDITKQLPAGI 49
           MGRGVS+GGGQSSLGYLF +GE  NN+P  K           P P +    I KQ PAGI
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANNSPVAKNVGNSASISPSPKPASASPPIDKQTPAGI 60

Query: 50  NSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           +    NNY RADGQN GNFITDRPSTKVHAAPGGGSSLGYLFGGG N
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGGGN 107

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169635145|gb|ACA58349.1| putative nitrilase-associated protein [Sandersonia aurantiaca]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/106 (66%), Positives = 75/106 (70%), Gaps = 11/106 (10%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQ-----------NNAPTQKPAPVAQPVDITKQLPAGI 49
           MGRGVS GGGQSSLGYLF DGEA            N  P  KP+  + P D  KQ+PAGI
Sbjct: 1   MGRGVSCGGGQSSLGYLFGDGEAHKPATSIPPAAGNAEPALKPSGASPPADNIKQVPAGI 60

Query: 50  NSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGS 95
              + NNY+R DGQN GNFITDRPSTKVHAAPGGGSSLGYLFG GS
Sbjct: 61  QGNNANNYLRMDGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGDGS 106

Source: Sandersonia aurantiaca

Species: Sandersonia aurantiaca

Genus: Sandersonia

Family: Liliaceae

Order: Liliales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585716|ref|XP_002533540.1| SP1L, putative [Ricinus communis] gi|223526590|gb|EEF28843.1| SP1L, putative [Ricinus communis]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 76/107 (71%), Gaps = 11/107 (10%)

Query: 1   MGRGVSSGGGQSSLGYLFSDGEAQNNAPTQK-----------PAPVAQPVDITKQLPAGI 49
           MGRGVS+GGGQSSLGYLF +GE  NN+P  K           P PV     I K++PAGI
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGETANNSPAAKSVGQAANNSPSPKPVVASPPINKEIPAGI 60

Query: 50  NSTSMNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGGSN 96
           +    NNY RADGQN GNFITDRPSTKVHAAPGGGSSLGYLFGG  N
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGTGN 107

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
TAIR|locus:4515102592	113	SP1L1 "SPIRAL1-like1" [Arabido	0.687	0.584	0.597	3.6e-18
TAIR|locus:2044224	119	SPR1 "AT2G03680" [Arabidopsis	0.458	0.369	0.711	2e-16
TAIR|locus:2026441	110	SP1L2 "AT1G69230" [Arabidopsis	0.645	0.563	0.634	2.3e-16
TAIR|locus:2180902	127	SP1L4 "AT5G15600" [Arabidopsis	0.406	0.307	0.65	1.9e-11
TAIR|locus:2076537	122	SP1L3 "AT3G02180" [Arabidopsis	0.395	0.311	0.666	2.2e-09
TAIR|locus:505006517	99	SP1L5 "AT4G23496" [Arabidopsis	0.677	0.656	0.472	3.3e-08

TAIR|locus:4515102592 SP1L1 "SPIRAL1-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 49/82 (59%), Positives = 56/82 (68%)

Query:    16 YLFSDGEAQ----NNAPTQK---------PAP---VAQPVDITKQLPAGINSTSMNNYMR 59
             YLF  GEA     NNAP            P+P    AQ V++TKQ+PAGIN +S NNY+R
Sbjct:    16 YLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQIPAGINKSSTNNYIR 75

Query:    60 ADGQNTGNFITDRPSTKVHAAP 81
             ADGQNTGNF+TDRPSTKVHAAP
Sbjct:    76 ADGQNTGNFLTDRPSTKVHAAP 97

GO:0005886 "plasma membrane" evidence=ISM

TAIR|locus:2044224 SPR1 "AT2G03680" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
 Identities = 32/45 (71%), Positives = 39/45 (86%)

Query:    37 QPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAP 81
             +P ++ KQ+PAGI  T +NNY RA+GQNTGNF+TDRPSTKVHAAP
Sbjct:    62 EPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAP 105

GO:0003674 "molecular_function" evidence=ND

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0055028 "cortical microtubule" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

GO:0051211 "anisotropic cell growth" evidence=IMP

GO:0043622 "cortical microtubule organization" evidence=IGI

GO:0071472 "cellular response to salt stress" evidence=IGI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2026441 SP1L2 "AT1G69230" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 40/63 (63%), Positives = 49/63 (77%)

Query:    19 SDGEAQNNAPTQKPAPVAQPVDITKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVH 78
             ++ E+  +AP  + A  A  VD  KQ+PAG+NS S NNYMRA+GQNTGNFITDRPSTKVH
Sbjct:    34 AETESSAHAPPTQAA-AANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVH 92

Query:    79 AAP 81
             +AP
Sbjct:    93 SAP 95

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180902 SP1L4 "AT5G15600" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 26/40 (65%), Positives = 32/40 (80%)

Query:    42 TKQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAP 81
             T++  AG+   S NNY R+DGQN GNF+T+RPSTKVHAAP
Sbjct:    70 TEENSAGVRG-SPNNYYRSDGQNCGNFLTERPSTKVHAAP 108

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076537 SP1L3 "AT3G02180" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query:    43 KQLPAGINSTSMNNYMRADGQNTGNFITDRPSTKVHAAP 81
             K+  AG+   S NNY R++GQN GNF+TDRPSTKVHAAP
Sbjct:    64 KKTSAGVRG-SPNNYFRSEGQNCGNFLTDRPSTKVHAAP 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006517 SP1L5 "AT4G23496" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 34/72 (47%), Positives = 40/72 (55%)

Query:    16 YLF-SDGEAQNN-APTQKPAPVAQP--VDITKQLPAGINST--SMNNYMRADGQNTGNFI 69
             YLF SD E     AP   P P A P  VD T++          S NNY R  GQN+GNF+
Sbjct:    16 YLFGSDNEIPKTPAPPVAPKP-APPYGVDSTEEDHEADQKPKISNNNYQRVQGQNSGNFV 74

Query:    70 TDRPSTKVHAAP 81
             TDRP+TKV + P
Sbjct:    75 TDRPTTKVKSVP 86


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.125   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        68   0.00091  102 3  11 23  0.38    29
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  435 (46 KB)
  Total size of DFA:  77 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.43u 0.15s 10.58t   Elapsed:  00:00:00
  Total cpu time:  10.43u 0.15s 10.58t   Elapsed:  00:00:00
  Start:  Fri May 10 23:26:34 2013   End:  Fri May 10 23:26:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B3H4F1	SP1L1_ARATH	No assigned EC number	0.6636	0.9791	0.8318	yes	no
Q2QQ99	SP1L3_ORYSJ	No assigned EC number	0.6265	0.7916	0.7524	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00