Citrus Sinensis ID: 034394

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALAALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHEEEcccHHHHHHHHHHHHHHHccccccEEccccccccccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccEEEEccccccccccEEEEEcccccccccc
Coil and Loop (DISEMBL)
MASSWRRTIGNLRSFvgnsmggvrggANLASWVVAGTLAYYLWVKPSQDLKREQEERAALaaldpnryvekrkpipdpqetgliygnknrsrksee
Flexible Loop (DISEMBL)
masswrrtigNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAlaaldpnryvekrkpipdpqetgliygnknrsrksee
Low Complexity Region (SEG)
MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERaalaalDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE
Disordered region (IsUnstruct)
*******TIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVK***************************************************
Disordered Region (DISOPRED)
*********GNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWV***********************YVEKR****DPQE****************
Disordered Region (DISEMBL)
MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALAALDPNRYVEKRKPIPDPQETGLIYGN*********
Disordered Region (DISPRO)
*********GNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALAALDPNRYVEKRKPIPDPQETGLIYGNK********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALAALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
449438867	97	PREDICTED: uncharacterized protein LOC10	0.989	0.979	0.863	8e-43
224083370	96	predicted protein [Populus trichocarpa]	1.0	1.0	0.802	3e-41
225457662	97	PREDICTED: uncharacterized protein LOC10	1.0	0.989	0.824	1e-40
255539336	98	conserved hypothetical protein [Ricinus	0.989	0.969	0.791	9e-39
30685765	193	uncharacterized protein [Arabidopsis tha	1.0	0.497	0.760	5e-38
351725643	100	uncharacterized protein LOC100527639 [Gl	0.989	0.95	0.783	6e-38
110735721	148	hypothetical protein [Arabidopsis thalia	1.0	0.648	0.760	8e-38
297826817	139	hypothetical protein ARALYDRAFT_321088 [	1.0	0.690	0.75	2e-37
26452982	96	unknown protein [Arabidopsis thaliana]	1.0	1.0	0.760	4e-37
357467189	130	hypothetical protein MTR_3g116150 [Medic	0.979	0.723	0.757	2e-35

>gi|449438867|ref|XP_004137209.1| PREDICTED: uncharacterized protein LOC101205325 isoform 1 [Cucumis sativus] gi|449438869|ref|XP_004137210.1| PREDICTED: uncharacterized protein LOC101205325 isoform 2 [Cucumis sativus] gi|449438871|ref|XP_004137211.1| PREDICTED: uncharacterized protein LOC101205325 isoform 3 [Cucumis sativus] gi|449483208|ref|XP_004156522.1| PREDICTED: uncharacterized LOC101205325 isoform 1 [Cucumis sativus] gi|449483212|ref|XP_004156523.1| PREDICTED: uncharacterized LOC101205325 isoform 2 [Cucumis sativus] gi|449483215|ref|XP_004156524.1| PREDICTED: uncharacterized LOC101205325 isoform 3 [Cucumis sativus]

 Score =  177 bits (449), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 82/95 (86%), Positives = 92/95 (96%)

Query: 2  ASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALA 61
          +SSWRR++GN+RSF+GNSMGG+RGGANLASWVVAGTLAYYLWVKPSQDLKREQ+ERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
          A+DP+RY+EKRKPIPDPQETGLIYGNKN  RK EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083370|ref|XP_002307000.1| predicted protein [Populus trichocarpa] gi|224148766|ref|XP_002336709.1| predicted protein [Populus trichocarpa] gi|222836564|gb|EEE74971.1| predicted protein [Populus trichocarpa] gi|222856449|gb|EEE93996.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 91/96 (94%)

Query: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
          M+S WRRT+GN+RSF+GNS+GG+RGG+N+ASW+VAGTLAYYLW+KPSQDLKR+QEERAAL
Sbjct: 1  MSSGWRRTVGNVRSFIGNSLGGLRGGSNVASWIVAGTLAYYLWIKPSQDLKRQQEERAAL 60

Query: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
          A+ DP RY+EKRKPIPDPQETGLIYG KNR+ KSEE
Sbjct: 61 ASSDPYRYIEKRKPIPDPQETGLIYGKKNRTNKSEE 96

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457662|ref|XP_002275896.1| PREDICTED: uncharacterized protein LOC100259899 isoform 1 [Vitis vinifera] gi|297745609|emb|CBI40774.3| unnamed protein product [Vitis vinifera]

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 80/97 (82%), Positives = 92/97 (94%), Gaps = 1/97 (1%)

Query: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
          MASSWRR++GN+RSF+GN MGG+RGG+NLASWVVAGTLAY+LWVKPSQ+L+REQEERAAL
Sbjct: 1  MASSWRRSLGNMRSFIGNCMGGLRGGSNLASWVVAGTLAYFLWVKPSQELRREQEERAAL 60

Query: 61 AAL-DPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
          AA  DP RYVEKRKPIPDPQETGLIYGNKNR+ KS++
Sbjct: 61 AAASDPYRYVEKRKPIPDPQETGLIYGNKNRTNKSQD 97

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539336|ref|XP_002510733.1| conserved hypothetical protein [Ricinus communis] gi|223551434|gb|EEF52920.1| conserved hypothetical protein [Ricinus communis]

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 76/96 (79%), Positives = 90/96 (93%), Gaps = 1/96 (1%)

Query: 2  ASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALA 61
          +S+WRRT+GN+RSF+GNSMGG+RGG+N+ASWVVAGTLAY+LW+KPSQDL+REQEERAA+A
Sbjct: 3  SSNWRRTLGNVRSFIGNSMGGLRGGSNIASWVVAGTLAYFLWIKPSQDLRREQEERAAIA 62

Query: 62 AL-DPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
          A  DP RYVEKRKPIPDPQETGLIYGNKN++ K  E
Sbjct: 63 AASDPYRYVEKRKPIPDPQETGLIYGNKNKTSKPAE 98

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685765|ref|NP_850214.1| uncharacterized protein [Arabidopsis thaliana] gi|330253762|gb|AEC08856.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  161 bits (407), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 85/96 (88%)

Query: 1   MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
           MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP QDLK+EQE RAAL
Sbjct: 98  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query: 61  AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
           A  D N+YVEKRKPI DPQ TGLIYGNKN + KSE+
Sbjct: 158 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725643|ref|NP_001235308.1| uncharacterized protein LOC100527639 [Glycine max] gi|255632830|gb|ACU16768.1| unknown [Glycine max]

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 76/97 (78%), Positives = 87/97 (89%), Gaps = 2/97 (2%)

Query: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
          MASSWRRT GN+RSFV NSMGG+RGG+NLASWVVAGTLAY+LW+KPSQDLKREQ+E+AAL
Sbjct: 1  MASSWRRTFGNMRSFVSNSMGGLRGGSNLASWVVAGTLAYFLWIKPSQDLKREQQEKAAL 60

Query: 61 AAL--DPNRYVEKRKPIPDPQETGLIYGNKNRSRKSE 95
          AA   DP RYVE RKPIPDPQ TGLIYGNKN+ + ++
Sbjct: 61 AAAESDPYRYVETRKPIPDPQVTGLIYGNKNKDKPTK 97

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110735721|dbj|BAE99840.1| hypothetical protein [Arabidopsis thaliana]

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 85/96 (88%)

Query: 1   MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
           MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP QDLK+EQE RAAL
Sbjct: 53  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 112

Query: 61  AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
           A  D N+YVEKRKPI DPQ TGLIYGNKN + KSE+
Sbjct: 113 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 148

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826817|ref|XP_002881291.1| hypothetical protein ARALYDRAFT_321088 [Arabidopsis lyrata subsp. lyrata] gi|297327130|gb|EFH57550.1| hypothetical protein ARALYDRAFT_321088 [Arabidopsis lyrata subsp. lyrata]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 86/96 (89%)

Query: 1   MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
           MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP+QDLK+EQ  RAAL
Sbjct: 44  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPAQDLKKEQVARAAL 103

Query: 61  AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
           A  DPN+YVEKRKPI DPQ TGLIYGNKNR+ K ++
Sbjct: 104 AMSDPNQYVEKRKPIADPQVTGLIYGNKNRTDKPQD 139

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26452982|dbj|BAC43567.1| unknown protein [Arabidopsis thaliana]

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 85/96 (88%)

Query: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
          MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP QDLK+EQE RAAL
Sbjct: 1  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 60

Query: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
          A  D N+YVEKRKPI DPQ TGLIYGNKN + KSE+
Sbjct: 61 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 96

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467189|ref|XP_003603879.1| hypothetical protein MTR_3g116150 [Medicago truncatula] gi|355492927|gb|AES74130.1| hypothetical protein MTR_3g116150 [Medicago truncatula]

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 82/95 (86%), Gaps = 1/95 (1%)

Query: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60
          MAS+WRRT+GN RSFV NSMGG+RGG+NLASWVVAGTLAYYLW+KP QDLKREQ+ +AA+
Sbjct: 1  MASNWRRTLGNARSFVNNSMGGLRGGSNLASWVVAGTLAYYLWIKPDQDLKREQQAKAAI 60

Query: 61 AAL-DPNRYVEKRKPIPDPQETGLIYGNKNRSRKS 94
          A+  DP RYVE RKP+PDPQ TGLIYGN N   KS
Sbjct: 61 ASHDDPFRYVETRKPVPDPQVTGLIYGNNNNKDKS 95

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
TAIR|locus:504956013	193	AT2G33585 "AT2G33585" [Arabido	1.0	0.497	0.718	2.4e-35

TAIR|locus:504956013 AT2G33585 "AT2G33585" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 69/96 (71%), Positives = 81/96 (84%)

Query:     1 MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERXXX 60
             MASSWRR+IGN+RSF+GNSMGG+RGG + ASWVVAGT+AY+LW+KP QDLK+EQE R   
Sbjct:    98 MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query:    61 XXXDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96
                D N+YVEKRKPI DPQ TGLIYGNKN + KSE+
Sbjct:   158 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        90   0.00091  102 3  11 23  0.41    30
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  554 (59 KB)
  Total size of DFA:  117 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.07u 0.11s 9.18t   Elapsed:  00:00:01
  Total cpu time:  9.07u 0.11s 9.18t   Elapsed:  00:00:01
  Start:  Fri May 10 23:29:37 2013   End:  Fri May 10 23:29:38 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	96
2rdd_B	37	UPF0092 membrane protein YAJC; drug resistance, mu	82.5

>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}

Probab=82.50  E-value=0.13  Score=28.95  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=22.3

Q ss_pred             chHHHHHHhhhheeeEEEcCchhhHHHHHH
Q 034394           27 ANLASWVVAGTLAYYLWVKPSQDLKREQEE   56 (96)
Q Consensus        27 ~nlAaW~VAG~lAYylwvkPe~~~~~eqe~   56 (96)
                      ..+.-.++..++-|||.++|.+.+++|+++
T Consensus         4 ~~~l~~v~~~~ifYFl~iRPQ~Kr~K~~~~   33 (37)
T 2rdd_B            4 SLILMLVVFGLIFYFMILRPQQKRTKEHKK   33 (37)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            456666677778899999998877776643

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00