Citrus Sinensis ID: 034462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccHHHHHccccccc
Coil and Loop (DISEMBL)
MASFCRSAIAAGSRSLaarskttsqstLTAKSIFSsfsssagplprASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWlsqdfavpr
Flexible Loop (DISEMBL)
MASFCRSAIaagsrslaarskttsqstltAKSIFssfsssagplPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSwlsqdfavpr
Low Complexity Region (SEG)
MASFCRSAIAAGSRSLAARSKTTSQSTLTAKsifssfsssAGPLPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR
Disordered region (IsUnstruct)
***********************************************************LMPLHSAIASARLKSSIAVDSTYWSWLSQDF****
Disordered Region (DISOPRED)
****************************************************ALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAV**
Disordered Region (DISEMBL)
****************************TAKSIFSSFSSSAGPLPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR
Disordered Region (DISPRO)
******************************************P*PRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQ******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
359475320	94	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.723	3e-28
359475318	94	PREDICTED: uncharacterized protein LOC10	0.989	0.989	0.688	3e-25
30692271	96	uncharacterized protein [Arabidopsis tha	1.0	0.979	0.625	6e-24
224103413	95	predicted protein [Populus trichocarpa]	0.989	0.978	0.670	2e-23
18420418	96	uncharacterized protein [Arabidopsis tha	0.989	0.968	0.621	1e-22
224080345	95	predicted protein [Populus trichocarpa]	0.989	0.978	0.659	2e-22
255536837	98	conserved hypothetical protein [Ricinus	0.957	0.918	0.638	1e-16
449465407	92	PREDICTED: uncharacterized protein LOC10	0.936	0.956	0.532	3e-13
357473241	88	hypothetical protein MTR_4g070030 [Medic	0.861	0.920	0.568	4e-13
449525522	86	PREDICTED: uncharacterized LOC101220077,	0.904	0.988	0.528	4e-12

>gi|359475320|ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853459 isoform 2 [Vitis vinifera]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 78/94 (82%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVESL 60
          MA  CRSA+ AG++SLA+RSK     TL++K + S FSSS  P+P ASR+LSALGSVESL
Sbjct: 1  MAGVCRSAVMAGTKSLASRSKALIPKTLSSKPLASPFSSSTRPMPCASRILSALGSVESL 60

Query: 61 MPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR 94
          MPLHSA+ASARLKS IAVDST WSWLSQDFAVPR
Sbjct: 61 MPLHSAVASARLKSFIAVDSTSWSWLSQDFAVPR 94

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475318|ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853459 isoform 1 [Vitis vinifera] gi|297741456|emb|CBI32587.3| unnamed protein product [Vitis vinifera]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 75/93 (80%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVESL 60
          MA  CRSA+ AG++SLA+RSK     TL++K + S FSSS  P+P ASR+LSALGSVESL
Sbjct: 1  MAGVCRSAVMAGTKSLASRSKALIPKTLSSKPLASPFSSSTRPMPCASRILSALGSVESL 60

Query: 61 MPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
          MPLHSA+ASARLKS IAVDST WSWLSQ  A+P
Sbjct: 61 MPLHSAVASARLKSFIAVDSTSWSWLSQGRALP 93

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30692271|ref|NP_849526.1| uncharacterized protein [Arabidopsis thaliana] gi|297797910|ref|XP_002866839.1| hypothetical protein ARALYDRAFT_490707 [Arabidopsis lyrata subsp. lyrata] gi|4914443|emb|CAB43646.1| putative protein [Arabidopsis thaliana] gi|7270915|emb|CAB80594.1| putative protein [Arabidopsis thaliana] gi|297312675|gb|EFH43098.1| hypothetical protein ARALYDRAFT_490707 [Arabidopsis lyrata subsp. lyrata] gi|332661654|gb|AEE87054.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 77/96 (80%), Gaps = 2/96 (2%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSS--FSSSAGPLPRASRVLSALGSVE 58
          MASFCRSA+ AGSR+L +RS+T +Q +L  K   +S  F+S +  +PRASRVLSALGSVE
Sbjct: 1  MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVE 60

Query: 59 SLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVPR 94
          +++PLHSA+ASARL+SSIA DS+ WS LSQ+  VPR
Sbjct: 61 TMIPLHSAVASARLRSSIAADSSCWSLLSQELGVPR 96

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103413|ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|222849455|gb|EEE87002.1| predicted protein [Populus trichocarpa]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 75/94 (79%), Gaps = 1/94 (1%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSS-AGPLPRASRVLSALGSVES 59
          MASFCRSAI A SRSLA+RSKT +Q TL AKS+ S F+S+    +  +SR +S LGSVES
Sbjct: 1  MASFCRSAITATSRSLASRSKTVTQKTLNAKSMSSPFTSTPTRTILASSRAVSVLGSVES 60

Query: 60 LMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
          LMPLH+AIA+ARLKSSIAVDS+ WSWLS+  A P
Sbjct: 61 LMPLHNAIANARLKSSIAVDSSCWSWLSRGLATP 94

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420418|ref|NP_568056.1| uncharacterized protein [Arabidopsis thaliana] gi|4914442|emb|CAB43645.1| putative protein [Arabidopsis thaliana] gi|7270914|emb|CAB80593.1| putative protein [Arabidopsis thaliana] gi|21593820|gb|AAM65787.1| unknown [Arabidopsis thaliana] gi|26449378|dbj|BAC41816.1| unknown protein [Arabidopsis thaliana] gi|28416791|gb|AAO42926.1| At4g39300 [Arabidopsis thaliana] gi|51971781|dbj|BAD44555.1| unknown protein [Arabidopsis thaliana] gi|51971935|dbj|BAD44632.1| unknown protein [Arabidopsis thaliana] gi|51972001|dbj|BAD44665.1| unknown protein [Arabidopsis thaliana] gi|332661653|gb|AEE87053.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 75/95 (78%), Gaps = 2/95 (2%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSS--FSSSAGPLPRASRVLSALGSVE 58
          MASFCRSA+ AGSR+L +RS+T +Q +L  K   +S  F+S +  +PRASRVLSALGSVE
Sbjct: 1  MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVE 60

Query: 59 SLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
          +++PLHSA+ASARL+SSIA DS+ WS LSQ  A P
Sbjct: 61 TMIPLHSAVASARLRSSIAADSSCWSLLSQGLATP 95

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080345|ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|222849070|gb|EEE86617.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 1/94 (1%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAG-PLPRASRVLSALGSVES 59
          MASFCRSA+ A +RSLA+ SKT  Q TL AKS+ S F+S+    +   SR++S LGSVES
Sbjct: 1  MASFCRSAMTATTRSLASLSKTAGQKTLYAKSMSSPFTSTPTRTILATSRIVSVLGSVES 60

Query: 60 LMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
          LMPLHSAIA+ARLKSSIAVDS+ WSWLSQ  A P
Sbjct: 61 LMPLHSAIANARLKSSIAVDSSCWSWLSQGLATP 94

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536837|ref|XP_002509485.1| conserved hypothetical protein [Ricinus communis] gi|223549384|gb|EEF50872.1| conserved hypothetical protein [Ricinus communis]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 74/94 (78%), Gaps = 4/94 (4%)

Query: 1  MASFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAG-PLPRASRVLSALGSVES 59
          MASF R A+ AGSRS+AA S+T +Q+ L AKSI S+FSS +   +  ASRV+S LGS+ S
Sbjct: 1  MASFGRLAVTAGSRSMAAGSRTLTQNCLHAKSISSAFSSPSTRTIASASRVVSVLGSMVS 60

Query: 60 LMPLHSAIASARLKSSIAVDSTYWSWLSQ---DF 90
          LMPLH+AIA++RLKSSIAVDS+ WSWLSQ   DF
Sbjct: 61 LMPLHTAIANSRLKSSIAVDSSCWSWLSQGAGDF 94

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465407|ref|XP_004150419.1| PREDICTED: uncharacterized protein LOC101220077 [Cucumis sativus]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 4/92 (4%)

Query: 1  MASFCRSAI-AAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVES 59
          MAS  RS + AA SRS+  R+K+ +  TL    + SS S +    P  +R++S+L +VES
Sbjct: 1  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRT---FPSFTRIVSSLANVES 57

Query: 60 LMPLHSAIASARLKSSIAVDSTYWSWLSQDFA 91
          LMPLH+A+ASARLKS IAVDS  WSWLS+ FA
Sbjct: 58 LMPLHTAVASARLKSKIAVDSHCWSWLSEGFA 89

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473241|ref|XP_003606905.1| hypothetical protein MTR_4g070030 [Medicago truncatula] gi|355507960|gb|AES89102.1| hypothetical protein MTR_4g070030 [Medicago truncatula]

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 58/88 (65%), Gaps = 7/88 (7%)

Query: 3  SFCRSAIAAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVESLMP 62
          SFC+SA    S S A RS+T +Q      SI   FSS A   PR SR+LS +GSVESLMP
Sbjct: 4  SFCKSAARVASTSFANRSRTFAQK----PSIPLLFSSQA---PRVSRILSVVGSVESLMP 56

Query: 63 LHSAIASARLKSSIAVDSTYWSWLSQDF 90
          LH+AIA ARL S+IA +ST WS LSQ  
Sbjct: 57 LHTAIADARLTSNIASNSTCWSMLSQGL 84

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525522|ref|XP_004169766.1| PREDICTED: uncharacterized LOC101220077, partial [Cucumis sativus]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 4/89 (4%)

Query: 1  MASFCRSAI-AAGSRSLAARSKTTSQSTLTAKSIFSSFSSSAGPLPRASRVLSALGSVES 59
          MAS  RS + AA SRS+  R+K+ +  TL    + SS S +    P  +R++S+L +VES
Sbjct: 1  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRT---FPSFTRIVSSLANVES 57

Query: 60 LMPLHSAIASARLKSSIAVDSTYWSWLSQ 88
          LMPLH+A+ASARLKS IAVDS  WSWLS+
Sbjct: 58 LMPLHTAVASARLKSKIAVDSHCWSWLSE 86

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
TAIR|locus:2136363	96	AT4G39300 "AT4G39300" [Arabido	0.989	0.968	0.589	4.8e-23
TAIR|locus:2181925	93	NOXY2 "AT5G11630" [Arabidopsis	0.797	0.806	0.362	2.1e-06
TAIR|locus:505006678	116	AT5G47455 "AT5G47455" [Arabido	0.925	0.75	0.362	3.4e-06
TAIR|locus:2130819	99	AT4G17310 [Arabidopsis thalian	0.936	0.888	0.370	7e-06
TAIR|locus:2091596	95	AT3G13674 "AT3G13674" [Arabido	0.5	0.494	0.46	3e-05
TAIR|locus:4010713552	103	AT1G55205 "AT1G55205" [Arabido	0.904	0.825	0.325	3.9e-05
TAIR|locus:505006258	100	NFD6 "AT2G20585" [Arabidopsis	0.840	0.79	0.336	5e-05
TAIR|locus:2055787	101	AT2G15000 "AT2G15000" [Arabido	0.797	0.742	0.337	0.00021
TAIR|locus:2016184	105	AT1G70350 "AT1G70350" [Arabido	0.468	0.419	0.477	0.00057

TAIR|locus:2136363 AT4G39300 "AT4G39300" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 56/95 (58%), Positives = 70/95 (73%)

Query:     1 MASFCRSAIAAGSRSLAARSKTTSQSTLTAKXXXXXX--XXXAGPLPRASRVLSALGSVE 58
             MASFCRSA+ AGSR+L +RS+T +Q +L  K           +  +PRASRVLSALGSVE
Sbjct:     1 MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVE 60

Query:    59 SLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
             +++PLHSA+ASARL+SSIA DS+ WS LSQ  A P
Sbjct:    61 TMIPLHSAVASARLRSSIAADSSCWSLLSQGLATP 95

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181925 NOXY2 "AT5G11630" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query:     1 MASFCRSAIAAGSRSLAARSKTTSQSTLTAKXXXXXXXXXAGPLPRASRVLSALGSVESL 60
             MAS CRS       + +A     ++ ++  K           P P  SR +  LGS++SL
Sbjct:     1 MASRCRSL---SKPAFSAFRSAMNKPSIRPKSASSFIG--VPPSPGFSRPIGQLGSLQSL 55

Query:    61 MPLHSAIASARLKSSIAVDS 80
             +PL+SA+ASARL S + +DS
Sbjct:    56 LPLYSAVASARLTSCLGIDS 75

GO:0003674 "molecular_function" evidence=ND

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0071433 "cell wall repair" evidence=IMP

TAIR|locus:505006678 AT5G47455 "AT5G47455" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 33/91 (36%), Positives = 50/91 (54%)

Query:     1 MASFCRSAIAAGSRSLAARSKTTSQSTLTAKXXXXXXXXXAGPLPRAS--RVLSALGSVE 58
             ++SF +SAI +  R+ +     +S +  ++          A PLPR S  R  S LG V+
Sbjct:    11 VSSF-KSAIRSSFRN-SPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSELGCVQ 68

Query:    59 SLMPLHSAIASARLKSSIAVDSTYWSWLSQD 89
             SL+PLHS +A+ARL S ++  S     L+QD
Sbjct:    69 SLLPLHSTVAAARLTSCLSTTSRSSRALTQD 99

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130819 AT4G17310 [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 33/89 (37%), Positives = 43/89 (48%)

Query:     1 MASFCRSAIAAGS-RSLAARSKTTSQSTLTAKXXXXXXXXXAGPLPRASRVLSALGSVES 59
             MAS CR      S  SL +  ++T+ ST  A                 SR  S LG V+S
Sbjct:     1 MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSELGCVQS 60

Query:    60 LMPLHSAIASARLKSSIAVDSTYWSWLSQ 88
             L+PLHS +A+ARL S ++  S     LSQ
Sbjct:    61 LLPLHSTVAAARLTSCLSTTSRSSRALSQ 89

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2091596 AT3G13674 "AT3G13674" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query:    44 LPRASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFAVP 93
             L R+SR+   L S   ++PLHSAIAS+RL SS++V+S  W  + Q  ++P
Sbjct:    48 LNRSSRLPVELSS---MIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLP 94

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

TAIR|locus:4010713552 AT1G55205 "AT1G55205" [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 29/89 (32%), Positives = 46/89 (51%)

Query:     2 ASFCRSAIAAGSRSLAAR-SKTTSQ-STLTAKXXXXXXXXXAGPLPRASRVLSALGSVES 59
             +  CR  +++   SL  + SKT    S+L +             + ++ R+   L    S
Sbjct:     5 SKICR--LSSKIHSLTQKLSKTNVHISSLPSPIKSSSPSSATSRINQSFRLPVELSCCLS 62

Query:    60 LMPLHSAIASARLKSSIAVDSTYWSWLSQ 88
             ++PLHSAIASARL SS++V+S  W  + Q
Sbjct:    63 MLPLHSAIASARLISSLSVESKSWGLVPQ 91

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006258 NFD6 "AT2G20585" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 31/92 (33%), Positives = 47/92 (51%)

Query:     7 SAIAAGSRSLAARSKTTSQSTLTAKXXXXXXXXXAGPLPRA----SRVLSALGS------ 56
             SA+ +G+RS+   + + S +  T +         A PL RA    S +LS L +      
Sbjct:     4 SAVLSGARSMLRAASSRSAAASTGRFASQAKS--APPLFRATARRSPLLSPLRNPVELSF 61

Query:    57 -VESLMPLHSAIASARLKSSIAVDSTYWSWLS 87
              VESL+P HSA ASA + S +++    + WLS
Sbjct:    62 CVESLLPYHSATASALMTSKLSISGQTYGWLS 93

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055787 AT2G15000 "AT2G15000" [Arabidopsis thaliana (taxid:3702)]

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 26/77 (33%), Positives = 40/77 (51%)

Query:     3 SFCRSAIAAGSRSLAARSKTTSQSTLTAKXXXXXXXXXAGPLPRASRVLSALGSVESLMP 62
             S  RS ++A +RS + RS TT+   L                P  SR L ALG  +S +P
Sbjct:     8 SAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSRRFTFSSP--SRNLGALGCTQSFLP 65

Query:    63 LHSAIASARLKSSIAVD 79
             L+S +A+++L S + V+
Sbjct:    66 LYSVVATSQLTSHLNVN 82

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2016184 AT1G70350 "AT1G70350" [Arabidopsis thaliana (taxid:3702)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query:    48 SRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQDFA 91
             SRV   L +  SL+PLHS  ASA L S +++ +  WS LS+ FA
Sbjct:    59 SRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSEGFA 102


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.119   0.334    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       94        85   0.00091  102 3  10 23  0.41    29
                                                     29  0.46    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  119 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.98u 0.20s 11.18t   Elapsed:  00:00:00
  Total cpu time:  10.98u 0.20s 11.18t   Elapsed:  00:00:00
  Start:  Thu May  9 16:09:49 2013   End:  Thu May  9 16:09:49 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036387001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (94 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	94
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 26/103 (25%)

Query: 3   SF---CRSAIAAGSRSLAAR--SKTTSQ-------STLT---AKSIFSSF-SSSAGPLPR 46
           +F   C+  +    + +     + TT+         TLT    KS+   +       LPR
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 47  ASRVLSALGSVESLMPLHSAIASARLKSSIAVDSTYWSWLSQD 89
                     V +  P   +I +  ++  +A     W  ++ D
Sbjct: 321 ---------EVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCD 353

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00