Citrus Sinensis ID: 034491

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHccccccccEEccEEEcccccccccccccccccccccccccccHHccHHHHcccccccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccccccccccccccccccccccccHHHHHHHHccccccccEEEEEEccccc
Coil and Loop (DISEMBL)
MALSLKSLMLLLATLCIMQALAAeaetcpdcfirsraahypnsdeqgtdsgacgfgsfgatinggdvsaasglyrnglgcgacYQVHISNQNA
Flexible Loop (DISEMBL)
MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA
Low Complexity Region (SEG)
malslkslmlllatlCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA
Disordered region (IsUnstruct)
*****KSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHY**********GACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHI*****
Disordered Region (DISOPRED)
***SLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISN***
Disordered Region (DISEMBL)
MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHY********DSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA
Disordered Region (DISPRO)
*ALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQ**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	93	2.2.26 [Sep-21-2011]
Q850K7	256	Expansin-like B1 OS=Oryza	yes	no	0.860	0.312	0.505	1e-18
O23547	250	Expansin-like B1 OS=Arabi	yes	no	0.806	0.3	0.425	4e-10
Q10S70	279	Expansin-like A1 OS=Oryza	yes	no	0.709	0.236	0.485	4e-09
Q7XCL0	275	Expansin-like A2 OS=Oryza	no	no	0.623	0.210	0.459	9e-07
Q4PR53	254	Expansin-A9 OS=Oryza sati	no	no	0.870	0.318	0.352	0.0004
Q7XT40	264	Expansin-B15 OS=Oryza sat	no	no	0.924	0.325	0.260	0.0004
Q5W6Z9	264	Expansin-B18 OS=Oryza sat	no	no	0.881	0.310	0.28	0.0005
Q4PR52	262	Expansin-A13 OS=Oryza sat	no	no	0.623	0.221	0.372	0.0006
Q4PR44	280	Expansin-A22 OS=Oryza sat	no	no	0.731	0.242	0.275	0.0006
Q40636	251	Expansin-A2 OS=Oryza sati	no	no	0.935	0.346	0.329	0.0006

>sp|Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 5/85 (5%)

Query: 6  KSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGG 65
          + L ++L+ +  +    A+A      F  SRAA+YPNSD +GT++GAC +G+FGAT+N G
Sbjct: 7  RHLPVILSLILFLSKATADAN-----FTVSRAAYYPNSDIKGTENGACEYGAFGATLNNG 61

Query: 66 DVSAASGLYRNGLGCGACYQVHISN 90
          DVSA++ LYR+G+GCGACYQV  +N
Sbjct: 62 DVSASASLYRDGVGCGACYQVRCTN 86

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)

Query: 8  LMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDV 67
          L+LL   + ++  L   +    D F+ SRA +Y + D +    G CG+G FG  IN G+V
Sbjct: 7  LLLLFVQVIVLLPLLCLS----DDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEV 62

Query: 68 SAASG-LYRNGLGCGACYQV 86
          S  S  L+ NG GCGACYQV
Sbjct: 63 SGVSWRLWNNGTGCGACYQV 82

Arabidopsis thaliana (taxid: 3702)

>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 25  AETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASG--LYRNGLGCGA 82
           A  C  C  RSRAA+Y +S      +G+CG+G+  AT NGG   AA+G  LYR G+GCGA
Sbjct: 33  ASGCDRCVRRSRAAYYTSS--LTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGA 90

Query: 83  CYQVHISNQN 92
           CYQV   ++ 
Sbjct: 91  CYQVRCKDKK 100

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%)

Query: 28 CPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQV 86
          C  C  RS+A    +S     ++G+CG+GS  A+ NGG ++AAS  L+R G+GCGAC+QV
Sbjct: 31 CDRCVRRSKAGFRDSS--IALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQV 88

Query: 87 H 87
           
Sbjct: 89 R 89

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR53|EXPA9_ORYSJ Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 3  LSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATI 62
          +  K L++L  +LC    L  EA      +  + A  Y  SD  GT  G+CG+G+  +  
Sbjct: 1  MEKKLLVVLFLSLCCASRLRGEAA---QQWTSATATFYGGSDASGTMGGSCGYGNMYSAG 57

Query: 63 NGGDVSA-ASGLYRNGLGCGACYQV 86
           G + +A +S LY +G  CGACY V
Sbjct: 58 YGTNTTALSSALYGDGASCGACYLV 82

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XT40|EXB15_ORYSJ Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 8   LMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPN--------SDEQGTDSGACGF--GS 57
             L+L+T  ++ A+      C       + + + N        ++  G+D GACG+    
Sbjct: 5   FQLILSTFVVIAAVTMLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACGYQGAV 64

Query: 58  FGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA 93
           F A  +    + +  +Y++GLGCG+CYQV  +  +A
Sbjct: 65  FQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA 100

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5W6Z9|EXB18_ORYSJ Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 18/100 (18%)

Query: 8   LMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPN--------SDEQGTDSGACGF---- 55
             L+L+T  ++ A       C       + + + N        ++  G+D GACG+    
Sbjct: 5   FQLILSTFVVIAAFTLLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACGYQAAV 64

Query: 56  --GSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQNA 93
               F + I  G  S    +Y++GLGCG+CYQV  S  +A
Sbjct: 65  DQAPFSSMIAAGSPS----IYKSGLGCGSCYQVKCSGNSA 100

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR52|EXP13_ORYSJ Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 29 PDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSA-ASGLYRNGLGCGACYQV 86
          P  ++R+ A  Y  +D  GT  GACG+G+  A   G   +A ++ L+ +GL CG CY++
Sbjct: 31 PSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKL 89

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR44|EXP22_ORYSJ Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 26  ETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGG-DVSAASGLYRNGLGCGACY 84
           +  P  ++++ A  Y  +D  GT  GACG+G   +   G  + + ++ L+ +G  CG CY
Sbjct: 46  DAAPPVWLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCY 105

Query: 85  QVHISNQNA 93
           ++    + A
Sbjct: 106 KIACDRKRA 114

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q40636|EXPA2_ORYSJ Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MA    +L+LL +  C    LA  A      +  + A  Y   D  GT  GACG+G+  +
Sbjct: 1  MASRSSALLLLFSAFCF---LARRAAADYGSWQSAHATFYGGGDASGTMGGACGYGNLYS 57

Query: 61 TINGGDVSAASG-LYRNGLGCGACYQVHISN 90
          T  G + +A S  L+ +G  CG+CY++   N
Sbjct: 58 TGYGTNTAALSTVLFNDGAACGSCYELRCDN 88

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
377824016	186	expansin L [Betula platyphylla]	0.978	0.489	0.717	2e-29
225427282	255	PREDICTED: expansin-like B1 [Vitis vinif	0.978	0.356	0.663	3e-27
449510804	255	PREDICTED: expansin-like B1-like [Cucumi	0.924	0.337	0.681	1e-26
449461545	255	PREDICTED: expansin-like B1-like [Cucumi	0.924	0.337	0.681	2e-26
356497060	255	PREDICTED: expansin-like B1-like [Glycin	0.935	0.341	0.688	4e-26
255575760	256	Major pollen allergen Ory s 1 precursor,	0.978	0.355	0.728	9e-26
356540583	255	PREDICTED: expansin-like B1-like [Glycin	0.849	0.309	0.716	2e-25
388506708	254	unknown [Medicago truncatula]	0.935	0.342	0.666	2e-25
255575762	256	Major pollen allergen Ory s 1 precursor,	0.956	0.347	0.766	3e-25
356495242	248	PREDICTED: LOW QUALITY PROTEIN: expansin	0.935	0.350	0.677	1e-24

>gi|377824016|gb|AFB77226.1| expansin L [Betula platyphylla]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MA SL S + L ATL +MQ LA EA+T  D F+ SRAA+YPNSD+QGTD+GACGFGSFGA
Sbjct: 1  MASSLWSPLSLFATLLLMQTLA-EAQTSSDSFVHSRAAYYPNSDQQGTDTGACGFGSFGA 59

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISNQN 92
          TINGGD SAAS LYRNG+GCGACYQV  +N N
Sbjct: 60 TINGGDASAASDLYRNGVGCGACYQVRCTNAN 91

Source: Betula platyphylla

Species: Betula platyphylla

Genus: Betula

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427282|ref|XP_002278917.1| PREDICTED: expansin-like B1 [Vitis vinifera]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 1/92 (1%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MAL   SL+L+ A+  +MQ+LA  A TC DCF  SRAA+YPNSDE GT++G CG+GSFGA
Sbjct: 1  MALPPHSLLLVFASFFLMQSLAYAA-TCSDCFTHSRAAYYPNSDELGTETGQCGYGSFGA 59

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISNQN 92
          TIN GDVSAAS LYR+G+GCGACYQV  +N N
Sbjct: 60 TINDGDVSAASDLYRDGVGCGACYQVRCTNSN 91

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449510804|ref|XP_004163761.1| PREDICTED: expansin-like B1-like [Cucumis sativus]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 70/88 (79%), Gaps = 2/88 (2%)

Query: 1  MALS-LKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFG 59
          MALS   S+   + TL +MQ L+ E+ TC DCF RSRAAHYPNS+EQGTD GACG+G+FG
Sbjct: 1  MALSSFSSVFAFVITLLLMQRLS-ESATCNDCFTRSRAAHYPNSEEQGTDHGACGYGTFG 59

Query: 60 ATINGGDVSAASGLYRNGLGCGACYQVH 87
          ATIN GDV+ AS LYRNGLGCGACYQ+ 
Sbjct: 60 ATINDGDVATASDLYRNGLGCGACYQIR 87

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461545|ref|XP_004148502.1| PREDICTED: expansin-like B1-like [Cucumis sativus]

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 69/88 (78%), Gaps = 2/88 (2%)

Query: 1  MALS-LKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFG 59
          MALS   S+   + TL +MQ L  E+ TC DCF RSRAAHYPNS+EQGTD GACG+G+FG
Sbjct: 1  MALSSFSSVFAFVITLLLMQRLF-ESATCNDCFTRSRAAHYPNSEEQGTDHGACGYGTFG 59

Query: 60 ATINGGDVSAASGLYRNGLGCGACYQVH 87
          ATIN GDV+ AS LYRNGLGCGACYQ+ 
Sbjct: 60 ATINDGDVATASDLYRNGLGCGACYQIR 87

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497060|ref|XP_003517382.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 3/90 (3%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MAL L  L+L + T   MQ LA  +  C DCFI SRAA+YPNS+E GTD GACGFGSFGA
Sbjct: 1  MALYLFCLLLAI-TFIFMQTLADTS--CTDCFIHSRAAYYPNSEEHGTDIGACGFGSFGA 57

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISN 90
          T+NGGDVSAAS LYRNG+GCGACYQV  +N
Sbjct: 58 TVNGGDVSAASSLYRNGVGCGACYQVRCTN 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575760|ref|XP_002528779.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223531782|gb|EEF33601.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MA SL+ L+LL ATL  +Q LA EA TC DCF  S+AA+YPNSDEQGTD GACGFGSFGA
Sbjct: 1  MAPSLRPLLLLFATLLFLQTLA-EAATCSDCFTHSQAAYYPNSDEQGTDRGACGFGSFGA 59

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISNQN 92
          TINGGDVSAAS LYR+G+GCG+CYQV   N N
Sbjct: 60 TINGGDVSAASNLYRDGVGCGSCYQVRCINSN 91

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540583|ref|XP_003538767.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 64/81 (79%), Gaps = 2/81 (2%)

Query: 10 LLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSA 69
          L   TL  MQ LA  +  C DCFI SRAA+YPNS+E GTD GACGFGSFGAT+NGGDVSA
Sbjct: 9  LFAITLIFMQTLADTS--CTDCFIHSRAAYYPNSEEHGTDVGACGFGSFGATVNGGDVSA 66

Query: 70 ASGLYRNGLGCGACYQVHISN 90
          AS LYRNG+GCGACYQV  +N
Sbjct: 67 ASSLYRNGVGCGACYQVRCTN 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506708|gb|AFK41420.1| unknown [Medicago truncatula]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 71/90 (78%), Gaps = 3/90 (3%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MALSL    +L+AT   MQ LA  +  C DCF++S A+ YPNS+E GTD+GACGFGSFGA
Sbjct: 1  MALSLLCF-VLIATFLFMQTLADTS--CTDCFVQSHASFYPNSEENGTDTGACGFGSFGA 57

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISN 90
          TINGGDVSAAS LYR+G+GCGACYQV  +N
Sbjct: 58 TINGGDVSAASSLYRDGVGCGACYQVRCTN 87

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575762|ref|XP_002528780.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223531783|gb|EEF33602.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/90 (76%), Positives = 77/90 (85%), Gaps = 1/90 (1%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MA SL SL+LLLATL  MQ LA EA TC DCF +SRAAHYPNSD+QGT SGACGFGSFGA
Sbjct: 1  MAPSLWSLLLLLATLLFMQTLA-EAATCSDCFSQSRAAHYPNSDDQGTVSGACGFGSFGA 59

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISN 90
          T+NGGDVSAAS LYR+G+GCGACYQV  ++
Sbjct: 60 TVNGGDVSAASNLYRDGVGCGACYQVRCTD 89

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495242|ref|XP_003516488.1| PREDICTED: LOW QUALITY PROTEIN: expansin-like B1-like [Glycine max]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 69/90 (76%), Gaps = 3/90 (3%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          MAL L  L+L + TL  MQ LA  +  C DC I S AA+YPNS E+GTD GACGFGSFGA
Sbjct: 1  MALYLFCLLLAI-TLIFMQTLADTS--CTDCXIHSWAAYYPNSKERGTDVGACGFGSFGA 57

Query: 61 TINGGDVSAASGLYRNGLGCGACYQVHISN 90
          T+NGGDVSAAS LYRNG+GCGACYQV  +N
Sbjct: 58 TVNGGDVSAASSLYRNGVGCGACYQVRCTN 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.612	0.228	0.517	1.9e-11
TAIR|locus:2077177	265	EXLA1 "expansin-like A1" [Arab	0.720	0.252	0.371	4.1e-09
TAIR|locus:2121803	265	EXLA2 "expansin-like A2" [Arab	0.774	0.271	0.346	2e-08
TAIR|locus:2077167	263	EXLA3 "expansin-like A3" [Arab	0.720	0.254	0.342	3.2e-08
TAIR|locus:2056670	253	EXPA15 "expansin A15" [Arabido	0.666	0.245	0.365	2.3e-07
TAIR|locus:2007106	275	EXPA1 "expansin A1" [Arabidops	0.634	0.214	0.366	4.8e-07
TAIR|locus:2200625	259	EXPA10 "expansin A10" [Arabido	0.634	0.227	0.366	8.8e-07
TAIR|locus:2043240	257	EXPA4 "expansin A4" [Arabidops	0.602	0.217	0.385	1.1e-06
TAIR|locus:2180182	258	EXPA9 "expansin A9" [Arabidops	0.634	0.228	0.366	2.4e-06
TAIR|locus:2161028	255	EXPA14 "expansin A14" [Arabido	0.591	0.215	0.375	3.1e-06

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 30/58 (51%), Positives = 37/58 (63%)

Query:    30 DCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASG-LYRNGLGCGACYQV 86
             D F+ SRA +Y + D +    G CG+G FG  IN G+VS  S  L+ NG GCGACYQV
Sbjct:    25 DDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQV 82

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2077177 EXLA1 "expansin-like A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query:    22 AAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAA-SGLYRNGLGC 80
             ++    C  C  RS+AA++  S      SGAC +GS   +   G ++AA   +Y++G GC
Sbjct:    15 SSSVNACDRCLHRSKAAYF--SSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGC 72

Query:    81 GACYQVHISN 90
             GAC+QV   N
Sbjct:    73 GACFQVRCKN 82

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2121803 EXLA2 "expansin-like A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query:    17 IMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAA-SGLYR 75
             ++   ++ A  C  C   S+AA++  S      SGAC +GS       G ++AA   +Y+
Sbjct:    11 VVLLFSSSAAACDRCLHSSKAAYF--SSASALSSGACAYGSMATGFFAGHIAAALPSIYK 68

Query:    76 NGLGCGACYQVHISN 90
             +G GCGAC+QV   N
Sbjct:    69 DGSGCGACFQVRCKN 83

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

TAIR|locus:2077167 EXLA3 "expansin-like A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 24/70 (34%), Positives = 38/70 (54%)

Query:    22 AAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAA-SGLYRNGLGC 80
             ++    C  C  RS+A+++  S      SGAC +G    +   G ++AA   +Y++G GC
Sbjct:    15 SSSVNACDRCLHRSKASYF--SSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGC 72

Query:    81 GACYQVHISN 90
             GAC+QV   N
Sbjct:    73 GACFQVRCKN 82

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2056670 EXPA15 "expansin A15" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query:    32 FIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISN 90
             ++ + A  Y  SD  GT  GACG+G+  +   G + +A S  L+ NGL CGAC+++   +
Sbjct:    30 WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQS 89

Query:    91 QNA 93
               A
Sbjct:    90 DGA 92

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2007106 EXPA1 "expansin A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query:    32 FIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISN 90
             ++ + A  Y   D  GT  GACG+G+  +   G + +A S  L+ NGL CGAC+++   N
Sbjct:    27 WVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQN 86

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2200625 EXPA10 "expansin A10" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query:    32 FIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISN 90
             +I + A  Y   D  GT  GACG+G+  +   G   +A S  L+ NGL CG+C+++   N
Sbjct:    36 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCEN 95

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS;IMP

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0005199 "structural constituent of cell wall" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=TAS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2043240 EXPA4 "expansin A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    35 SRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISN 90
             + A  Y  SD  GT  GACG+G+  +   G + +A S  L+ NG+ CGAC+++  +N
Sbjct:    34 AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCAN 90

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2180182 EXPA9 "expansin A9" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query:    32 FIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISN 90
             +I + A  Y  +D  GT  GACG+G+  +   G + +A S  L+ NGL CG+C+++   N
Sbjct:    32 WINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCIN 91

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TAIR|locus:2161028 EXPA14 "expansin A14" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query:    32 FIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQV 86
             ++ +RA  Y  +D  GT  GACG+G+  +   G + +A S  L+  G  CGAC+Q+
Sbjct:    29 WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQI 84

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015809001 SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (255 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	93
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	4e-21
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	2e-07
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	7e-07

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 83.3 bits (206), Expect = 4e-21
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 15 LCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLY 74
          LC++  L    +   D F  SRA +Y + D  GT +GACGFG +G T+NGG+V+  S LY
Sbjct: 10 LCVIVLLPLLCK-SQD-FTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSRLY 67

Query: 75 RNGLGCGACYQV 86
          RNG GCGACYQV
Sbjct: 68 RNGTGCGACYQV 79

Length = 247

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 10 LLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSA 69
           L  T+  + ++    E     +  + A  Y   D  GT  GACG+G+  +   G + +A
Sbjct: 3  CLGYTIVALLSILKIVEGYGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 62

Query: 70 AS-GLYRNGLGCGACYQVHISNQN 92
           S  L+ NGL CGAC+++   N N
Sbjct: 63 LSTALFNNGLSCGACFEIKCVNDN 86

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 44.9 bits (106), Expect = 7e-07
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 1  MALSLKSLMLLLATLCIMQALAAEAETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGA 60
          M+ SL  L +LL   C +  +   A T P  + ++ A  Y  SD  GT  GACG+G+  +
Sbjct: 1  MSKSLLGLAILLQFCCYL-FINVNAFT-PSGWTKAHATFYGGSDASGTMGGACGYGNLYS 58

Query: 61 TINGGDVSAAS-GLYRNGLGCGACYQV 86
          T  G   +A S  L+ +G  CG CY++
Sbjct: 59 TGYGTRTAALSTALFNDGASCGQCYRI 85

Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
PLN03023	247	Expansin-like B1; Provisional	99.94
PLN00193	256	expansin-A; Provisional	99.9
PLN00050	247	expansin A; Provisional	99.89
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.66
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	97.49
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	80.73

>PLN03023 Expansin-like B1; Provisional

Probab=99.94  E-value=9.6e-28  Score=183.54  Aligned_cols=66  Identities=53%  Similarity=0.947  Sum_probs=60.8

Q ss_pred             ccCCCCceeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeecccCCCCCCCcceEEEEeCCCC
Q 034491           26 ETCPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHISNQN   92 (93)
Q Consensus        26 ~~~~~~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S~lf~~G~~CGaCyeVrC~~~~   92 (93)
                      ..|+ +|+++||||||+||+.|+++|||||+++..+.+|.++||+|+|||||++||+||||||++++
T Consensus        20 ~~~~-~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s~Lf~~G~~CGaCy~irC~~~~   85 (247)
T PLN03023         20 CKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSRLYRNGTGCGACYQVRCKAPN   85 (247)
T ss_pred             hhcC-CcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeehhhhcCCchhcccEEeecCCCC
Confidence            3455 49999999999999999999999999999899999999999999999999999999998754

>PLN00193 expansin-A; Provisional

Probab=99.90  E-value=5e-24  Score=163.79  Aligned_cols=62  Identities=35%  Similarity=0.747  Sum_probs=58.8

Q ss_pred             CCCCceeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeC
Q 034491           28 CPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHIS   89 (93)
Q Consensus        28 ~~~~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~   89 (93)
                      -+.+|++++|||||++|+.|+++|||||+++..+++|+++||+| +|||+|++||+||||||.
T Consensus        26 ~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~   88 (256)
T PLN00193         26 TPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCD   88 (256)
T ss_pred             CCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECC
Confidence            45579999999999999999999999999999899999999999 999999999999999995

>PLN00050 expansin A; Provisional

Probab=99.89  E-value=1.2e-23  Score=160.88  Aligned_cols=64  Identities=34%  Similarity=0.710  Sum_probs=60.0

Q ss_pred             CCCCceeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491           28 CPDCFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ   91 (93)
Q Consensus        28 ~~~~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~   91 (93)
                      ...+|.++||||||++|+.|+++|||||+++..+++|.++||+| +|||+|++||+||||||+++
T Consensus        21 ~~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~   85 (247)
T PLN00050         21 YGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVND   85 (247)
T ss_pred             cCCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCC
Confidence            35679999999999999999999999999999899999999999 99999999999999999664

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.66  E-value=2.2e-16  Score=110.56  Aligned_cols=50  Identities=30%  Similarity=0.490  Sum_probs=42.2

Q ss_pred             eeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491           33 IRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ   91 (93)
Q Consensus        33 ~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~   91 (93)
                      .+|+||||+++     ..|+| |++   .++|.++||+| +||+||..||+||||||.++
T Consensus        22 ~~G~AT~Y~~~-----~~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~   72 (125)
T PLN03024         22 TPGIATFYTSY-----TPSAC-YRG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGP   72 (125)
T ss_pred             cceEEEEeCCC-----CCccc-cCC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCC
Confidence            57999999864     33799 554   35789999999 99999999999999999764

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=97.49  E-value=3.7e-05  Score=48.53  Aligned_cols=22  Identities=50%  Similarity=0.960  Sum_probs=18.9

Q ss_pred             eeeec-ccCCCCCCCcceEEEEe
Q 034491           67 VSAAS-GLYRNGLGCGACYQVHI   88 (93)
Q Consensus        67 vAA~S-~lf~~G~~CGaCyeVrC   88 (93)
                      ++|++ .+|++|.+||+||+++|
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~   23 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTC   23 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE
T ss_pred             CeEEEhhhcCCCCcCCCeeeccc
Confidence            57889 99999999999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=80.73  E-value=2.9  Score=29.24  Aligned_cols=23  Identities=17%  Similarity=0.551  Sum_probs=15.0

Q ss_pred             cceeeec--ccCCCCCCCcceEEEEe
Q 034491           65 GDVSAAS--GLYRNGLGCGACYQVHI   88 (93)
Q Consensus        65 ~~vAA~S--~lf~~G~~CGaCyeVrC   88 (93)
                      .+|.+..  +-|| ...||.|||++=
T Consensus        43 p~IGg~~~V~gWn-S~~CGtC~~lty   67 (119)
T PF07249_consen   43 PYIGGAPAVAGWN-SPNCGTCWKLTY   67 (119)
T ss_dssp             TSEEEETT--STT--TTTT-EEEEEE
T ss_pred             CeeccccccccCC-CCCCCCeEEEEE
Confidence            4566666  5675 579999999974

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	93
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	8e-11
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	8e-09
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	7e-04

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score = 55.2 bits (132), Expect = 8e-11
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 27 TCPDCFIRSRAAHYPNSDEQGTDS--GACGFGSFGATINGGDVSAAS-GLYRNGLGCGAC 83
          T  D ++ +++  Y      G     GACG+         G     +  ++++G GCG+C
Sbjct: 14 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSC 73

Query: 84 YQV 86
          +++
Sbjct: 74 FEI 76

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score = 49.8 bits (118), Expect = 8e-09
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 32 FIRSRAAHYPNSDEQGTD--SGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQV 86
          ++ +RA  Y   +  G     GACG  +       G  +  +  ++++G GCG+CY+V
Sbjct: 19 WLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEV 76

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 35.6 bits (82), Expect = 7e-04
 Identities = 7/46 (15%), Positives = 13/46 (28%), Gaps = 6/46 (13%)

Query: 46 QGTDSGACGFGSFGATINGGDVSAASGLYRNGL----GCGACYQVH 87
           G   GA       + +    ++ A      G       G+  +V 
Sbjct: 16 SGYSGGAFLLDPIPSDMEITAINPA--DLNYGGVKAALAGSYLEVE 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.87
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.86
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.74
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.37
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	90.27
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	83.31
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	82.12
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	80.21

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.87  E-value=7e-23  Score=154.48  Aligned_cols=66  Identities=21%  Similarity=0.627  Sum_probs=54.6

Q ss_pred             ccCCCCceeeeEEEcCCCCCCCC--CCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491           26 ETCPDCFIRSRAAHYPNSDEQGT--DSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ   91 (93)
Q Consensus        26 ~~~~~~w~~g~AT~Yg~~~~~g~--~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~   91 (93)
                      ..++.+|++++||||+++++.|+  ++|||||++++..+++.++||+| +||+||++||+||||||.++
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~   81 (241)
T 1n10_A           13 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKP   81 (241)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSS
T ss_pred             CcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCC
Confidence            45789999999999999998888  89999999988889999999999 99999999999999999864

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.86  E-value=2.1e-22  Score=152.04  Aligned_cols=66  Identities=24%  Similarity=0.642  Sum_probs=61.5

Q ss_pred             ccCCCCceeeeEEEcCCCCCCCC--CCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491           26 ETCPDCFIRSRAAHYPNSDEQGT--DSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ   91 (93)
Q Consensus        26 ~~~~~~w~~g~AT~Yg~~~~~g~--~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~   91 (93)
                      ..++.+|++++||||+++++.|+  ++|||||++++..|++.++||+| +||++|++||+||||||.++
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~   81 (245)
T 2hcz_X           13 TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEK   81 (245)
T ss_dssp             SCCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSS
T ss_pred             cccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCC
Confidence            45788999999999999999888  89999999988889999999999 99999999999999999864

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.74  E-value=5.1e-19  Score=129.60  Aligned_cols=56  Identities=29%  Similarity=0.481  Sum_probs=50.8

Q ss_pred             CCceeeeEEEcCCCCCCCCCCCcCCCC-----CCCCCCCCcceeeec-ccCCCC------CCCcceEEEEeCC
Q 034491           30 DCFIRSRAAHYPNSDEQGTDSGACGFG-----SFGATINGGDVSAAS-GLYRNG------LGCGACYQVHISN   90 (93)
Q Consensus        30 ~~w~~g~AT~Yg~~~~~g~~gGaCGyg-----~~~~~~~g~~vAA~S-~lf~~G------~~CGaCyeVrC~~   90 (93)
                      ..|+.++||||++.     ++||||||     ++++.++|.++||+| +||++|      ++||+||||+|++
T Consensus        12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~   79 (181)
T 1wc2_A           12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTG   79 (181)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEE
T ss_pred             CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCC
Confidence            45999999999985     78999999     677778999999999 999997      8999999999965

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.37  E-value=4.5e-13  Score=98.45  Aligned_cols=53  Identities=13%  Similarity=0.058  Sum_probs=45.0

Q ss_pred             CceeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeec-ccCCCC----CCCcceEEEEeCC
Q 034491           31 CFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNG----LGCGACYQVHISN   90 (93)
Q Consensus        31 ~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G----~~CGaCyeVrC~~   90 (93)
                      +.+.|+||||++..    ++||||+.   ..+++.++||+| .+|++|    ..||+||||+|.+
T Consensus         5 ~~~~G~aT~Y~~g~----~~GACG~~---~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~~   62 (208)
T 3d30_A            5 DLHEGYATYTGSGY----SGGAFLLD---PIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPK   62 (208)
T ss_dssp             CCEEEEEEECSTTS----SSCTTCCC---CCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEETT
T ss_pred             CcEEEEEEEcCCCC----CCCcCCCC---CCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeCC
Confidence            45789999999753    67999986   346788999999 999998    8999999999954

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=90.27  E-value=0.16  Score=34.84  Aligned_cols=40  Identities=23%  Similarity=0.265  Sum_probs=25.0

Q ss_pred             CCCcCCCCCCCCC-----CCCcceeeec-ccC-CCCCCCcceEEEEeCC
Q 034491           49 DSGACGFGSFGAT-----INGGDVSAAS-GLY-RNGLGCGACYQVHISN   90 (93)
Q Consensus        49 ~gGaCGyg~~~~~-----~~g~~vAA~S-~lf-~~G~~CGaCyeVrC~~   90 (93)
                      ..+.|+--+..+.     .|+  -.|+. .+. +++..||+|+||++..
T Consensus        27 ~s~~C~t~da~~~~~~~~~y~--wtA~~g~~gp~~g~~CG~cv~Vtn~~   73 (125)
T 1bw3_A           27 VSAYCATWDASKPLSWRSKYG--WTAFCGPAGPRGQAACGKCLRVTNPA   73 (125)
T ss_dssp             TCCTTHHHHTTSCHHHHHHSC--CEESCSTTCCCSGGGTTCEEEEEETT
T ss_pred             eeEeeecccCCCceeEecCCC--ceEeccCCCCCCCcccCCEEEeEeCC
Confidence            5588975221111     122  23455 444 8889999999999874

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=83.31  E-value=1.2  Score=30.33  Aligned_cols=23  Identities=17%  Similarity=0.599  Sum_probs=16.6

Q ss_pred             cceeeec--ccCCCCCCCcceEEEEe
Q 034491           65 GDVSAAS--GLYRNGLGCGACYQVHI   88 (93)
Q Consensus        65 ~~vAA~S--~lf~~G~~CGaCyeVrC   88 (93)
                      .+|.+..  .=|| ...||.||||+=
T Consensus        44 P~IGg~~~i~gwn-s~~CGtC~~lty   68 (120)
T 3m3g_A           44 PYIGGAAAVAGWN-SASCGTCWKLQY   68 (120)
T ss_dssp             TSEEEETTCCSTT-CTTTTCEEEEEE
T ss_pred             CccccccccccCC-CCCCCceEEEEE
Confidence            3566655  4566 489999999974

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=82.12  E-value=1.8  Score=29.80  Aligned_cols=23  Identities=26%  Similarity=0.664  Sum_probs=17.7

Q ss_pred             cceeeec--ccCCCCCCCcceEEEEe
Q 034491           65 GDVSAAS--GLYRNGLGCGACYQVHI   88 (93)
Q Consensus        65 ~~vAA~S--~lf~~G~~CGaCyeVrC   88 (93)
                      .+|.+..  +=|| ...||.||||+=
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty   74 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTI   74 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEE
T ss_pred             CeeccchhhccCC-CCCCCceEEEEE
Confidence            4566666  4577 699999999974

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=80.21  E-value=1.5  Score=29.92  Aligned_cols=22  Identities=36%  Similarity=0.729  Sum_probs=16.7

Q ss_pred             eeeec--ccCCCCCCCcceEEEEeC
Q 034491           67 VSAAS--GLYRNGLGCGACYQVHIS   89 (93)
Q Consensus        67 vAA~S--~lf~~G~~CGaCyeVrC~   89 (93)
                      |.+..  +=||+ ..||.|||++=.
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~   69 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWS   69 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEET
T ss_pred             cccccccccCCC-CCCCceEEEEEc
Confidence            65555  55776 999999999744

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	93
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	1e-09
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	7e-04

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 49.6 bits (118), Expect = 1e-09
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 32 FIRSRAAHYPNSDEQGTDS--GACGFGSFGATINGGDVSAASG-LYRNGLGCGACYQV 86
          ++ +++  Y      G     GACG+         G     +  ++++G GCG+C+++
Sbjct: 17 WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEI 74

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 34.3 bits (78), Expect = 7e-04
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 12/52 (23%)

Query: 47 GTDSGACGFGSFGATI-----NGGDVSAASGLYRN-------GLGCGACYQV 86
           +  GACG G            G  V+AAS +Y +       G  CG C ++
Sbjct: 24 DSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKL 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	99.87
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.74

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.87  E-value=5.3e-23  Score=143.01  Aligned_cols=66  Identities=21%  Similarity=0.627  Sum_probs=54.2

Q ss_pred             ccCCCCceeeeEEEcCCCCCCCC--CCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491           26 ETCPDCFIRSRAAHYPNSDEQGT--DSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ   91 (93)
Q Consensus        26 ~~~~~~w~~g~AT~Yg~~~~~g~--~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~   91 (93)
                      +....+|++++|||||++++.++  .+|||||+++...|++.++||+| +||++|..||+||||+|.++
T Consensus        11 a~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~   79 (143)
T d1n10a2          11 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKP   79 (143)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSS
T ss_pred             cccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCC
Confidence            45678999999999999988775  47999999998889999999999 99999999999999999875

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.74  E-value=3.3e-19  Score=128.67  Aligned_cols=57  Identities=28%  Similarity=0.497  Sum_probs=49.5

Q ss_pred             CCceeeeEEEcCCCCCCCCCCCcCCCCCCCC-----CCCCcceeeec-ccCCC------CCCCcceEEEEeCCC
Q 034491           30 DCFIRSRAAHYPNSDEQGTDSGACGFGSFGA-----TINGGDVSAAS-GLYRN------GLGCGACYQVHISNQ   91 (93)
Q Consensus        30 ~~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~-----~~~g~~vAA~S-~lf~~------G~~CGaCyeVrC~~~   91 (93)
                      ..|+.+++|||+++     ++||||||++..     .++|.++||+| +||++      |++||+||||||+++
T Consensus        12 ~g~~~A~aT~Ygd~-----~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~   80 (180)
T d1wc2a1          12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGG   80 (180)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEE
T ss_pred             CCccccceEEeCCC-----CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCC
Confidence            47999999999976     579999999743     35678999999 99999      899999999999763