Citrus Sinensis ID: 034510

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
MGNSFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccEEcHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEcccccccHHHHHHcccccccEEEEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEcHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccccccHHHHHccccccccEEEEEEEEEEcccccEEc
Coil and Loop (DISEMBL)
MGNSFLFYLQANaasgmavhddCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKlgeptqtyeDFAAslpaeecryavydydfvtaencqkk
Flexible Loop (DISEMBL)
MGNSFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK
Low Complexity Region (SEG)
MGNSFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK
Disordered region (IsUnstruct)
****FLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTA******
Disordered Region (DISOPRED)
***SF***LQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDF**A******
Disordered Region (DISEMBL)
MGNSFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK
Disordered Region (DISPRO)
***************GMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGNSFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
Q9ZSK3	139	Actin-depolymerizing fact	yes	no	0.880	0.582	0.888	4e-38
Q9FVI2	139	Actin-depolymerizing fact	N/A	no	0.880	0.582	0.876	7e-38
Q39250	139	Actin-depolymerizing fact	no	no	0.880	0.582	0.851	6e-37
Q9FVI1	143	Actin-depolymerizing fact	N/A	no	0.880	0.566	0.839	5e-36
Q39251	137	Actin-depolymerizing fact	no	no	0.858	0.576	0.814	1e-33
Q9ZSK4	139	Actin-depolymerizing fact	no	no	0.880	0.582	0.753	5e-33
Q9LQ81	140	Actin-depolymerizing fact	no	no	0.880	0.578	0.740	1e-31
Q570Y6	140	Actin-depolymerizing fact	no	no	0.880	0.578	0.716	5e-31
Q6EUH7	139	Actin-depolymerizing fact	yes	no	0.880	0.582	0.716	6e-31
Q7XSN9	139	Actin-depolymerizing fact	no	no	0.880	0.582	0.691	1e-30

>sp|Q9ZSK3|ADF4_ARATH Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2

 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQVIVEK+GEP  TYEDFAASLP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYA+YD+DFVTAENCQK
Sbjct: 62 ADECRYAIYDFDFVTAENCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FVI2|ADF1_PETHY Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1

 Score =  155 bits (392), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEPT++YEDFAASLP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
            ECRYAVYD+DFVTAENCQK
Sbjct: 62 ENECRYAVYDFDFVTAENCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Petunia hybrida (taxid: 4102)

>sp|Q39250|ADF1_ARATH Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1

 Score =  152 bits (384), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYA+YD+DFVTAENCQK
Sbjct: 62 ADECRYAIYDFDFVTAENCQK 82

Actin-depolymerizing protein. Stimulates F-actin depolymerization. Involved in plant development, cell organ expansion and flowering by controlling breakdown of thick actin cables.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FVI1|ADF2_PETHY Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 77/81 (95%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKFLELKAKRTYRFI++KIEEKQK+V+VEKLGEPT++YEDF A LP
Sbjct: 2  ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DF+T EN QK
Sbjct: 62 ADECRYAVYDFDFMTKENHQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Petunia hybrida (taxid: 4102)

>sp|Q39251|ADF2_ARATH Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 76/81 (93%), Gaps = 2/81 (2%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKF+ELKAKRT+R IV+KIE+KQ  VIVEKLGEP Q+Y+DFAASLP
Sbjct: 2  ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLP 59

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A++CRY +YD+DFVTAENCQK
Sbjct: 60 ADDCRYCIYDFDFVTAENCQK 80

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZSK4|ADF3_ARATH Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 74/81 (91%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKF+ELK KRT+RFI++KIEE QKQVIVEK+GEP QT+ED AASLP
Sbjct: 2  ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYA++D+DFV++E   +
Sbjct: 62 ADECRYAIFDFDFVSSEGVPR 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ81|ADF10_ARATH Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 70/81 (86%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          AN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P +TYEDF  S+P
Sbjct: 2  ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
           +ECRYAVYDYDF T ENCQK
Sbjct: 62 EDECRYAVYDYDFTTPENCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q570Y6|ADF8_ARATH Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2

 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 72/81 (88%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          AN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P +TY+DF +S+P
Sbjct: 2  ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
           +ECRYAVYD+DF T +NCQK
Sbjct: 62 DDECRYAVYDFDFTTEDNCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6EUH7|ADF1_ORYSJ Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1

 Score =  132 bits (332), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 74/81 (91%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          +N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QV+V++LG+P ++Y+DF A LP
Sbjct: 2  SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAV+D+DFVT ENCQK
Sbjct: 62 ADECRYAVFDFDFVTDENCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XSN9|ADF6_ORYSJ Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 72/81 (88%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          AN+ASGMAV D+CKLKF ELK+KR++RFI FKI+E+ +QV+V++LG+P  TY+DF AS+P
Sbjct: 2  ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A ECRYAV+D+DFVT ENCQK
Sbjct: 62 ASECRYAVFDFDFVTDENCQK 82

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
359486829	146	PREDICTED: actin-depolymerizing factor 2	0.956	0.602	0.863	9e-38
449440343	182	PREDICTED: actin-depolymerizing factor 2	0.902	0.456	0.879	9e-38
255584766	139	actin depolymerizing factor, putative [R	0.880	0.582	0.913	9e-38
296086270	202	unnamed protein product [Vitis vinifera]	0.956	0.435	0.863	1e-37
225435040	139	PREDICTED: actin-depolymerizing factor 2	0.880	0.582	0.901	2e-37
297741474	189	unnamed protein product [Vitis vinifera]	0.880	0.428	0.901	2e-37
225449595	139	PREDICTED: actin-depolymerizing factor 2	0.880	0.582	0.913	5e-37
298362843	139	actin-depolymerizing factor [Hevea brasi	0.880	0.582	0.901	6e-37
225439733	139	PREDICTED: actin-depolymerizing factor 1	0.880	0.582	0.901	7e-37
317159549	139	actin depolymerizing factor 4 [Hevea bra	0.880	0.582	0.901	7e-37

>gi|359486829|ref|XP_003633478.1| PREDICTED: actin-depolymerizing factor 2-like [Vitis vinifera]

 Score =  160 bits (405), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 81/88 (92%)

Query: 4  SFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYE 63
          SF     ANAASGMAVHDDCKLKFLELKAKRTYR IVF+IEEKQKQVIVEK+GEPTQ+YE
Sbjct: 2  SFSIRSHANAASGMAVHDDCKLKFLELKAKRTYRSIVFQIEEKQKQVIVEKVGEPTQSYE 61

Query: 64 DFAASLPAEECRYAVYDYDFVTAENCQK 91
          DFAASLPA+ECRYAVYD+DFVT ENCQK
Sbjct: 62 DFAASLPADECRYAVYDFDFVTEENCQK 89

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440343|ref|XP_004137944.1| PREDICTED: actin-depolymerizing factor 2-like [Cucumis sativus]

 Score =  160 bits (405), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 81/83 (97%)

Query: 9   LQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAAS 68
           LQANAASG+AVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQV+VEK+GEPTQ+YEDFA S
Sbjct: 58  LQANAASGIAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAKS 117

Query: 69  LPAEECRYAVYDYDFVTAENCQK 91
           LP++ECRYA+YD+DFVT ENCQK
Sbjct: 118 LPSDECRYAIYDFDFVTEENCQK 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584766|ref|XP_002533101.1| actin depolymerizing factor, putative [Ricinus communis] gi|223527092|gb|EEF29273.1| actin depolymerizing factor, putative [Ricinus communis]

 Score =  160 bits (405), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 74/81 (91%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRTYRFIVFKIEEKQKQVIVEK+GEP Q+YEDF ASLP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTYRFIVFKIEEKQKQVIVEKVGEPAQSYEDFTASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DFVTAENCQK
Sbjct: 62 ADECRYAVYDFDFVTAENCQK 82

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086270|emb|CBI31711.3| unnamed protein product [Vitis vinifera]

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 81/88 (92%)

Query: 4   SFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYE 63
           S L    ANAASGMAVHDDCKLKFLELKAKRTYR IVF+IEEKQKQVIVEK+GEPTQ+YE
Sbjct: 58  SLLLARMANAASGMAVHDDCKLKFLELKAKRTYRSIVFQIEEKQKQVIVEKVGEPTQSYE 117

Query: 64  DFAASLPAEECRYAVYDYDFVTAENCQK 91
           DFAASLPA+ECRYAVYD+DFVT ENCQK
Sbjct: 118 DFAASLPADECRYAVYDFDFVTEENCQK 145

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435040|ref|XP_002284292.1| PREDICTED: actin-depolymerizing factor 2-like isoform 1 [Vitis vinifera] gi|359478986|ref|XP_003632201.1| PREDICTED: actin-depolymerizing factor 2-like isoform 2 [Vitis vinifera]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKFLELKAKRTYRFIV+KIEEKQKQV+VEK+GEPTQ+YEDF ASLP
Sbjct: 2  ANAASGMAVHDDCKLKFLELKAKRTYRFIVYKIEEKQKQVVVEKVGEPTQSYEDFTASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DFVT ENCQK
Sbjct: 62 ADECRYAVYDFDFVTEENCQK 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741474|emb|CBI32606.3| unnamed protein product [Vitis vinifera]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 78/81 (96%)

Query: 11  ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
           ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQV+VEK+GEP Q+YEDF ASLP
Sbjct: 52  ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPAQSYEDFTASLP 111

Query: 71  AEECRYAVYDYDFVTAENCQK 91
           A+ECRYAVYD+DFVT ENCQK
Sbjct: 112 ADECRYAVYDFDFVTEENCQK 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449595|ref|XP_002284029.1| PREDICTED: actin-depolymerizing factor 2-like isoform 1 [Vitis vinifera] gi|225449597|ref|XP_002284040.1| PREDICTED: actin-depolymerizing factor 2-like isoform 2 [Vitis vinifera]

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 74/81 (91%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKFLELKAKRTYR IVF+IEEKQKQVIVEK+GEPTQ+YEDFAASLP
Sbjct: 2  ANAASGMAVHDDCKLKFLELKAKRTYRSIVFQIEEKQKQVIVEKVGEPTQSYEDFAASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DFVT ENCQK
Sbjct: 62 ADECRYAVYDFDFVTEENCQK 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298362843|gb|ADI78873.1| actin-depolymerizing factor [Hevea brasiliensis]

 Score =  157 bits (398), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 78/81 (96%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRTYR+IVFKIEEK KQVIVEKLGEPTQ+YEDF ASLP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTYRYIVFKIEEKAKQVIVEKLGEPTQSYEDFTASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DFVT ENCQK
Sbjct: 62 ADECRYAVYDFDFVTEENCQK 82

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439733|ref|XP_002273958.1| PREDICTED: actin-depolymerizing factor 1-like [Vitis vinifera]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 78/81 (96%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQV+VEK+GEP Q+YEDF ASLP
Sbjct: 2  ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPAQSYEDFTASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+DFVT ENCQK
Sbjct: 62 ADECRYAVYDFDFVTEENCQK 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317159549|gb|ADV04049.1| actin depolymerizing factor 4 [Hevea brasiliensis]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 78/81 (96%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASG+AVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPT +YEDF ASLP
Sbjct: 2  ANAASGIAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTNSYEDFTASLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYAVYD+D+VT ENCQK
Sbjct: 62 ADECRYAVYDFDYVTDENCQK 82

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
TAIR|locus:2168063	139	ADF4 "actin depolymerizing fac	0.880	0.582	0.888	7.2e-36
TAIR|locus:2077122	150	ADF1 "actin depolymerizing fac	0.956	0.586	0.791	1.5e-35
TAIR|locus:2077107	137	ADF2 "actin depolymerizing fac	0.858	0.576	0.814	2.9e-32
TAIR|locus:2168052	139	ADF3 "actin depolymerizing fac	0.836	0.553	0.792	1.8e-30
TAIR|locus:2198175	140	ADF11 "actin depolymerizing fa	0.880	0.578	0.740	3.8e-30
TAIR|locus:2127073	140	ADF8 "actin depolymerizing fac	0.880	0.578	0.716	1.3e-29
TAIR|locus:2131879	137	ADF7 "actin depolymerizing fac	0.858	0.576	0.728	7.1e-29
TAIR|locus:2156727	137	ADF10 "actin depolymerizing fa	0.858	0.576	0.703	1.5e-26
TAIR|locus:2042546	146	ADF6 "actin depolymerizing fac	0.956	0.602	0.602	6.6e-26
TAIR|locus:2131556	141	ADF9 "actin depolymerizing fac	0.847	0.553	0.512	6.3e-21

TAIR|locus:2168063 ADF4 "actin depolymerizing factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 72/81 (88%), Positives = 79/81 (97%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQVIVEK+GEP  TYEDFAASLP
Sbjct:     2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query:    71 AEECRYAVYDYDFVTAENCQK 91
             A+ECRYA+YD+DFVTAENCQK
Sbjct:    62 ADECRYAIYDFDFVTAENCQK 82

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009870 "defense response signaling pathway, resistance gene-dependent" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2077122 ADF1 "actin depolymerizing factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 72/91 (79%), Positives = 84/91 (92%)

Query:     4 SFLFYL---QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQ 60
             S +F+L    ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P Q
Sbjct:     3 SSIFHLLSRSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQ 62

Query:    61 TYEDFAASLPAEECRYAVYDYDFVTAENCQK 91
             TYE+FAA LPA+ECRYA+YD+DFVTAENCQK
Sbjct:    63 TYEEFAACLPADECRYAIYDFDFVTAENCQK 93

GO:0003779 "actin binding" evidence=IEA;TAS

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0007015 "actin filament organization" evidence=IMP

GO:0030042 "actin filament depolymerization" evidence=IDA

TAIR|locus:2077107 ADF2 "actin depolymerizing factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 66/81 (81%), Positives = 76/81 (93%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             ANAASGMAVHDDCKLKF+ELKAKRT+R IV+KIE+KQ  VIVEKLGEP Q+Y+DFAASLP
Sbjct:     2 ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLP 59

Query:    71 AEECRYAVYDYDFVTAENCQK 91
             A++CRY +YD+DFVTAENCQK
Sbjct:    60 ADDCRYCIYDFDFVTAENCQK 80

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2168052 ADF3 "actin depolymerizing factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 61/77 (79%), Positives = 73/77 (94%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             ANAASGMAVHDDCKLKF+ELK KRT+RFI++KIEE QKQVIVEK+GEP QT+ED AASLP
Sbjct:     2 ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61

Query:    71 AEECRYAVYDYDFVTAE 87
             A+ECRYA++D+DFV++E
Sbjct:    62 ADECRYAIFDFDFVSSE 78

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2198175 ADF11 "actin depolymerizing factor 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 60/81 (74%), Positives = 70/81 (86%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             AN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P +TYEDF  S+P
Sbjct:     2 ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query:    71 AEECRYAVYDYDFVTAENCQK 91
              +ECRYAVYDYDF T ENCQK
Sbjct:    62 EDECRYAVYDYDFTTPENCQK 82

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2127073 ADF8 "actin depolymerizing factor 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 58/81 (71%), Positives = 72/81 (88%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             AN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P +TY+DF +S+P
Sbjct:     2 ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query:    71 AEECRYAVYDYDFVTAENCQK 91
              +ECRYAVYD+DF T +NCQK
Sbjct:    62 DDECRYAVYDFDFTTEDNCQK 82

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2131879 ADF7 "actin depolymerizing factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 59/81 (72%), Positives = 71/81 (87%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             ANAASGMAV D+CKLKFLELK+KR YRFI+F+I+ +Q  V+VEKLG P +TY+DF ASLP
Sbjct:     2 ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLP 59

Query:    71 AEECRYAVYDYDFVTAENCQK 91
             A ECRYAV+D+DF+T ENCQK
Sbjct:    60 ANECRYAVFDFDFITDENCQK 80

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005884 "actin filament" evidence=IDA

TAIR|locus:2156727 ADF10 "actin depolymerizing factor 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 57/81 (70%), Positives = 66/81 (81%)

Query:    11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
             ANAASGMAV D+CKLKFLELKAKR YRFI+F+I+ +Q  V+VEKLG P + Y+DF   LP
Sbjct:     2 ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQ--VVVEKLGSPQENYDDFTNYLP 59

Query:    71 AEECRYAVYDYDFVTAENCQK 91
               ECRYAVYD+DF TAEN QK
Sbjct:    60 PNECRYAVYDFDFTTAENIQK 80

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005884 "actin filament" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2042546 ADF6 "actin depolymerizing factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 53/88 (60%), Positives = 70/88 (79%)

Query:     4 SFLFYLQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYE 63
             SF    + NA SGM V D+ K  FLEL+ K+T+R++VFKI+E +K+V+VEK G PT++Y+
Sbjct:     2 SFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYD 61

Query:    64 DFAASLPAEECRYAVYDYDFVTAENCQK 91
             DF ASLP  +CRYAVYD+DFVT+ENCQK
Sbjct:    62 DFLASLPDNDCRYAVYDFDFVTSENCQK 89

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2131556 ADF9 "actin depolymerizing factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 40/78 (51%), Positives = 63/78 (80%)

Query:    13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE 72
             A SGM + DDCK  F+E+K K+ +R++V+K+EEK ++V V+K+G   ++Y+D AASLP +
Sbjct:     6 ATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED 65

Query:    73 ECRYAVYDYDFVTAENCQ 90
             +CRYAV+D+D+VT +NC+
Sbjct:    66 DCRYAVFDFDYVTVDNCR 83

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0030041 "actin filament polymerization" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZSK3	ADF4_ARATH	No assigned EC number	0.8888	0.8804	0.5827	yes	no
Q6EUH7	ADF1_ORYSJ	No assigned EC number	0.7160	0.8804	0.5827	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	ADF4	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding; actin depolymerizing factor 4 (ADF4) mRNA, complete cds ; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity) (139 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT3G45500	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (201 aa)							•		0.537
	AT3G45490	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (211 aa)							•		0.537
	GLTP1	GLTP1 (glycolipid transfer protein 1); glycolipid binding / glycolipid transporter; glycolipid [...] (202 aa)				•			•		0.451
	AT4G12060	Clp amino terminal domain-containing protein; Clp amino terminal domain-containing protein; FUN [...] (241 aa)				•					0.429
	NDB2	NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase; NAD(P) [...] (582 aa)				•					0.419
	HR3	HR3 (HOMOLOG OF RPW8 3); Homolog of RPW8 (213 aa)							•		0.408
	ACT12	ACT12 (ACTIN-12); structural constituent of cytoskeleton; Member of actin subclass composed of [...] (377 aa)							•		0.408
	FIM1	ATFIM1; actin binding; fimbrin-like protein ; Cross-links actin filaments (F-actin) in a calciu [...] (687 aa)							•		0.407

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	92
cd11286	133	cd11286, ADF_cofilin_like, Cofilin, Destrin, and r	4e-32
PLN03216	141	PLN03216, PLN03216, actin depolymerizing factor; P	6e-32
smart00102	127	smart00102, ADF, Actin depolymerisation factor/cof	4e-22
pfam00241	127	pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type a	3e-19
PTZ00152	122	PTZ00152, PTZ00152, cofilin/actin-depolymerizing f	9e-11

>gnl|CDD|200442 cd11286, ADF_cofilin_like, Cofilin, Destrin, and related actin depolymerizing factors

 Score =  108 bits (272), Expect = 4e-32
 Identities = 34/77 (44%), Positives = 55/77 (71%)

Query: 15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEEC 74
          SG+ V D+C   F ELK K+ +++I+FKI + +K+++VEK+GE   +Y+DF   LP  EC
Sbjct: 1  SGVKVSDECITAFNELKLKKKHKYIIFKISDDKKEIVVEKVGERDASYDDFLEKLPENEC 60

Query: 75 RYAVYDYDFVTAENCQK 91
          RYAVYD+++ T +  ++
Sbjct: 61 RYAVYDFEYETKDGGKR 77

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. These proteins enhance the turnover rate of actin, and interact with actin monomers (G-actin) as well as actin filaments (F-actin), typically with a preference for ADP-G-actin subunits. The basic function of cofilin is to promote disassembly of aged actin filaments. Vertebrates have three isoforms of cofilin: cofilin-1 (Cfl1, non-muscle cofilin), cofilin-2 (muscle cofilin), and ADF (destrin). When bound to actin monomers, cofilins inhibit their spontaneous exchange of nucleotides. The cooperative binding to (aged) ADP-F-actin induces a local change in the actin filament structure and further promotes aging. Length = 133

>gnl|CDD|178755 PLN03216, PLN03216, actin depolymerizing factor; Provisional

 Score =  108 bits (270), Expect = 6e-32
 Identities = 44/79 (55%), Positives = 65/79 (82%)

Query: 13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE 72
          A +GM V D+CK  F+E+K K+ +R+IVFKI+EK ++V V+K+G P ++Y+D AASLP +
Sbjct: 6  ATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTD 65

Query: 73 ECRYAVYDYDFVTAENCQK 91
          +CRYAV+D+DFVT +NC+K
Sbjct: 66 DCRYAVFDFDFVTVDNCRK 84

Length = 141

>gnl|CDD|214516 smart00102, ADF, Actin depolymerisation factor/cofilin -like domains

 Score = 82.7 bits (205), Expect = 4e-22
 Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 21 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYD 80
          +DCK  F ELK KR +  I+FKI++  ++++VE++G    +Y++F   LP +ECRYA+YD
Sbjct: 1  EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYD 60

Query: 81 YDFVTAENCQK 91
          Y F T E  +K
Sbjct: 61 YKFTT-EESKK 70

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|143992 pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein

 Score = 75.5 bits (186), Expect = 3e-19
 Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%)

Query: 21 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYD 80
          D+ K  F ELK ++ + +I+FKI++ + Q++VE++G+   +Y++F   LP  ECRYAVYD
Sbjct: 1  DNLKASFNELKKRKKHNYIIFKIDKDKDQIVVEQVGDTGDSYDEFVEELPERECRYAVYD 60

Query: 81 YDFVTAENCQK 91
           ++ T +  +K
Sbjct: 61 VEY-TTDGSKK 70

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|173441 PTZ00152, PTZ00152, cofilin/actin-depolymerizing factor 1-like protein; Provisional

 Score = 53.4 bits (128), Expect = 9e-11
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE- 72
           SG+ V+D+C  +F  +K ++T R+I+F IE    ++I+   G  T T  +   S+    
Sbjct: 2  ISGIRVNDNCVTEFNNMKIRKTCRWIIFVIE--NCEIIIHSKGATT-TLTELVGSIDKND 58

Query: 73 --ECRYAVYD 80
            +C Y V+D
Sbjct: 59 KIQCAYVVFD 68

Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
PLN03216	141	actin depolymerizing factor; Provisional	99.95
KOG1735	146	consensus Actin depolymerizing factor [Cytoskeleto	99.92
PTZ00152	122	cofilin/actin-depolymerizing factor 1-like protein	99.86
cd00013	132	ADF Actin depolymerisation factor/cofilin -like do	99.8
PF00241	127	Cofilin_ADF: Cofilin/tropomyosin-type actin-bindin	99.73
smart00102	127	ADF Actin depolymerisation factor/cofilin -like do	99.72
KOG1736	143	consensus Glia maturation factor beta [Extracellul	99.5
KOG1747	342	consensus Protein tyrosine kinase 9/actin monomer-	97.93
KOG1747	342	consensus Protein tyrosine kinase 9/actin monomer-	95.8

>PLN03216 actin depolymerizing factor; Provisional

Probab=99.95  E-value=3.8e-28  Score=165.55  Aligned_cols=80  Identities=55%  Similarity=1.063  Sum_probs=74.6

Q ss_pred             cccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCcccC
Q 034510           13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK   92 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~~   92 (92)
                      ++|||+|+|+|+++||+||++|.+|||||+|++++++|+|++.+.++.+|+||++.||+++|||+||||+|++++|++|+
T Consensus         6 ~~SGi~v~~~c~~~f~~lk~~k~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~~~~rY~vyd~~~~~~~g~~~~   85 (141)
T PLN03216          6 ATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTDDCRYAVFDFDFVTVDNCRKS   85 (141)
T ss_pred             cCCCCeeCHHHHHHHHHHHhCCCceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCCCCCeEEEEEeEeccCCCCccc
Confidence            37999999999999999999999999999999988899999877667899999999999999999999999999998764

>KOG1735 consensus Actin depolymerizing factor [Cytoskeleton]

Probab=99.92  E-value=4e-25  Score=151.68  Aligned_cols=75  Identities=57%  Similarity=1.003  Sum_probs=71.7

Q ss_pred             cccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCC---CCCceEEEEEeEeecCC
Q 034510           13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP---AEECRYAVYDYDFVTAE   87 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp---~~~cRY~vyD~~y~~~d   87 (92)
                      |+|||+|+|+|+.+|++||.+|.||||||+|++++++|+||+.|..+.+|++|...||   .++||||+|||+|++..
T Consensus         1 ~aSGv~Vsde~~~~F~elk~kk~~r~ivF~i~~~~~~i~ve~~g~~~~s~~~f~~~l~~~~~~dCrYA~yDf~f~t~~   78 (146)
T KOG1735|consen    1 MASGVAVSDECKKVFNELKVKKRKRYVVFKISEDKKQIIVEKGGSPGASYDDFVASLPKMPEKDCRYALYDFEFETKE   78 (146)
T ss_pred             CCcceEecHHHHHHHHHHHhhcceeEEEEEeccccccccccccCCCCCchhhhHHHhccCCccccceEEecceEEeec
Confidence            4699999999999999999999999999999999999999999988999999999999   99999999999999944

>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional

Probab=99.86  E-value=1.6e-21  Score=130.68  Aligned_cols=67  Identities=33%  Similarity=0.676  Sum_probs=61.4

Q ss_pred             cccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCC---ceEEEEEeE
Q 034510           13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEE---CRYAVYDYD   82 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~---cRY~vyD~~   82 (92)
                      |+|||+|+++|+++|++||.+|.+|||||+|++  ++|+|++.++ ..+|++|++.||+++   |||+||||+
T Consensus         1 m~SGi~v~de~~~~f~~lk~~k~~r~iifkI~~--~~Ivv~~~~~-~~~~~e~~~~L~~~~~~~crY~vyd~~   70 (122)
T PTZ00152          1 MISGIRVNDNCVTEFNNMKIRKTCRWIIFVIEN--CEIIIHSKGA-TTTLTELVGSIDKNDKIQCAYVVFDAV   70 (122)
T ss_pred             CCCCcCcCHHHHHHHHHHhcCCcceEEEEEEcC--cEEEEEecCC-CCCHHHHHHhccccCCCCceEEEEccC
Confidence            579999999999999999999999999999975  6899998875 569999999999998   999999983

>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments

Probab=99.80  E-value=5.6e-19  Score=117.08  Aligned_cols=76  Identities=47%  Similarity=0.965  Sum_probs=68.4

Q ss_pred             cCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCccc
Q 034510           15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQK   91 (92)
Q Consensus        15 SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~   91 (92)
                      |||+|+++|.++|++||.+++.+|++|+|+.+.++|++++.+....+|++|++.||+++|||++|++++.++ |+.+
T Consensus         1 sgi~i~~e~~~a~~~~~~~~~~~~vi~~i~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~y~~~~~~~~~~-~~~~   76 (132)
T cd00013           1 SGIKVSDECKEAFEELKSGKKTRWIIFKIDDDKKEIVVEKTGEGGESFDEFVEELPEDECRYALYDYDFTTE-GSKK   76 (132)
T ss_pred             CCceECHHHHHHHHHHHhCCceeEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEecccCC-Cccc
Confidence            699999999999999999888999999999988899999887544689999999999999999999999876 4443

>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma

Probab=99.73  E-value=1.4e-17  Score=109.80  Aligned_cols=68  Identities=34%  Similarity=0.803  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           21 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        21 de~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      |+|.++|++||.+++++||+|+|++++++|+|++.|+...+|++|++.||+++|||++|++.|+++++
T Consensus         1 ~e~~~~~~~~~~~~~~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~~~p~y~~~~~~~~~~~~   68 (127)
T PF00241_consen    1 DECKAAFQELKSKKSTRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPDDEPRYILYRFEYTHKGS   68 (127)
T ss_dssp             HHHHHHHHHHHTTTSCSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCTTSEEEEEEEEEEEETTS
T ss_pred             CHHHHHHHHHHcCCCceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhcccCCcEEEEEEeeecccCC
Confidence            79999999999998899999999999889999998767889999999999999999999999998854

ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....

>smart00102 ADF Actin depolymerisation factor/cofilin -like domains

Probab=99.72  E-value=3.6e-17  Score=108.57  Aligned_cols=68  Identities=46%  Similarity=0.944  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           21 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        21 de~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      ++|.++|++||++++++|+||+|+.++++|+|++++.++.+|+||++.||+++|||++|+|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~~~~ry~~~~~~~~~~~~   68 (127)
T smart00102        1 EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKFTTEES   68 (127)
T ss_pred             ChHHHHHHHHHcCCCceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCccCceEEEEEeecccCCC
Confidence            47999999999998899999999998889999998766788999999999999999999999988754

Severs actin filaments and binds to actin monomers.

>KOG1736 consensus Glia maturation factor beta [Extracellular structures]

Probab=99.50  E-value=5.2e-14  Score=94.85  Aligned_cols=77  Identities=16%  Similarity=0.316  Sum_probs=67.8

Q ss_pred             ccCceeCHHHHHHHHHHhcc-Cc--ceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCcc
Q 034510           14 ASGMAVHDDCKLKFLELKAK-RT--YRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQ   90 (92)
Q Consensus        14 ~SGv~vsde~~~~f~~lK~~-k~--~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~   90 (92)
                      .--++|+++..+...+||.+ |.  ..+||.||+.+..+||+|+.--...+-+++.+.||+++|||++|.|.++|+||+.
T Consensus         5 ~~~~~i~~et~~ki~kFR~r~k~t~~~A~imKidK~~~eiV~d~Eeld~is~eEladeLpe~~PRFvl~sYpt~t~DGr~   84 (143)
T KOG1736|consen    5 LVVCKIGTETREKIRKFRFRTKETSNAAIIMKIDKDSYEIVLDEEELDEISPEELADELPERQPRFVLYSYPTTTDDGRV   84 (143)
T ss_pred             eeEEEeCHHHHHHHHHhhhhhccccceeEEEEecCCceEeecCHHHhccCChHHHHhhccccCCcEEEEECcccccCCcc
Confidence            33589999999999999998 43  8999999999999999994333567888999999999999999999999999975

>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]

Probab=97.93  E-value=4.6e-05  Score=58.30  Aligned_cols=72  Identities=11%  Similarity=0.350  Sum_probs=60.8

Q ss_pred             ccCc--eeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCC
Q 034510           14 ASGM--AVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE   87 (92)
Q Consensus        14 ~SGv--~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~d   87 (92)
                      ++||  .|+++..++.++|+-++ +.||+|.|+-.+..|.+.+.. ...+..|+...+|.+.|||..|-|..++..
T Consensus       172 l~Gva~pi~~~a~kAl~~L~~~~-~n~vql~ID~~nE~I~l~~t~-~~~e~sdL~s~vP~d~prY~ff~~~ht~eG  245 (342)
T KOG1747|consen  172 LQGVAFPIDRNAEKALQDLKSSK-LNYVQLSIDLENETIQLSQTD-TCTEPSDLPSRVPRDGPRYHFFLFKHTHEG  245 (342)
T ss_pred             ccceeecccHHHHHHHHHHHhhc-cceEEEEeccccceeeeeccC-CCCChHHhhhhcCCCCCceEEEecccccCC
Confidence            3565  46799999999999888 899999999876778887753 457899999999999999999998877654

>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]

Probab=95.80  E-value=0.021  Score=44.03  Aligned_cols=70  Identities=26%  Similarity=0.360  Sum_probs=52.1

Q ss_pred             cccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCC----CCCHHHHHhhCC-CCCceEEEEEeEeec
Q 034510           13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEP----TQTYEDFAASLP-AEECRYAVYDYDFVT   85 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~----~~~~~df~~~Lp-~~~cRY~vyD~~y~~   85 (92)
                      -++||.-+.+..+.|++=|-+| .|.+.--|+++  ++.+....+.    +.+|+.++..|- +.+|+|++|-.+-.+
T Consensus         3 ~QtGI~A~e~l~~~l~~~~~~k-~R~ikIvI~nE--ql~~~s~~e~~~~w~~D~~~~v~~ll~~~ePcyILyrlds~~   77 (342)
T KOG1747|consen    3 HQTGIRATEALKKFLNEAKNGK-LRLIKIVIENE--QLSPGSTSEPSTSWERDYDKLVLPLLDAREPCYILYRLDSKN   77 (342)
T ss_pred             cccccchHHHHHHHHHhcccCc-eEEEEEEEecc--cccCCccccccccHHHHHHHHHHHhhccCCceEEEEeecCCC
Confidence            4689999999999999988775 78888888874  6776554433    445667766554 679999999775443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	92
1f7s_A	139	Crystal Structure Of Adf1 From Arabidopsis Thaliana		4e-38
1ahq_A	137	Recombinant Actophorin Length = 137		1e-16
1cnu_A	137	Phosphorylated Actophorin From Acantamoeba Polyphag		3e-16
2l72_A	139	Solution Structure And Dynamics Of Adf From Toxopla		6e-11
2i2q_A	137	Fission Yeast Cofilin Length = 137		3e-10
1cfy_A	143	Yeast Cofilin, Monoclinic Crystal Form Length = 143		2e-07
1tvj_A	166	Solution Structure Of Chick Cofilin Length = 166		5e-05
1q8g_A	166	Nmr Structure Of Human Cofilin Length = 166		7e-05
1ak6_A	174	Destrin, Nmr, Minimized Average Structure Length =		1e-04
2lj8_A	144	Solution Structure Of AdfCOFILIN FROM TRYPANOSOMA B		3e-04
2xfa_A	148	Crystal Structure Of Plasmodium Berghei Actin Depol		7e-04

>pdb|1F7S|A Chain A, Crystal Structure Of Adf1 From Arabidopsis Thaliana Length = 139

Iteration: 1
 Score =  152 bits (384), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 79/81 (97%)
Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61
Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYA+YD+DFVTAENCQK
Sbjct: 62 ADECRYAIYDFDFVTAENCQK 82

>pdb|1AHQ|A Chain A, Recombinant Actophorin Length = 137

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEEC 74
          SG+AV DDC  KF ELK    +R++ FK+     +V+VE +G P  TYEDF + LP  +C
Sbjct: 1  SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDC 60
Query: 75 RYAVYDYDF 83
          RYA++DY+F
Sbjct: 61 RYAIFDYEF 69

>pdb|1CNU|A Chain A, Phosphorylated Actophorin From Acantamoeba Polyphaga Length = 137

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 16 GMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECR 75
          G+AV DDC  KF ELK    +R++ FK+     +V+VE +G P  TYEDF + LP  +CR
Sbjct: 2  GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCR 61
Query: 76 YAVYDYDF 83
          YA++DY+F
Sbjct: 62 YAIFDYEF 69

>pdb|2L72|A Chain A, Solution Structure And Dynamics Of Adf From Toxoplasma Gondii (Tgadf) Length = 139

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEE 73
          ASGM V ++C  +F ELK ++T ++IVFKIE    +++VEK G+     ++F  +LPA +
Sbjct: 23 ASGMGVDENCVARFNELKIRKTVKWIVFKIE--NTKIVVEKDGK--GNADEFRGALPAND 78
Query: 74 CRYAVYD 80
          CR+ VYD
Sbjct: 79 CRFGVYD 85

>pdb|2I2Q|A Chain A, Fission Yeast Cofilin Length = 137

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEEC 74
          SG+ V  +C   F ELK  ++ R++VFK+ + + +++VEK     + ++ F   LP ++C
Sbjct: 4  SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDC 62
Query: 75 RYAVYDYDFVTAENCQKK 92
          RYA+YD++F   E  + K
Sbjct: 63 RYAIYDFEFNLGEGVRNK 80

>pdb|1CFY|A Chain A, Yeast Cofilin, Monoclinic Crystal Form Length = 143

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIV-EKLGEPTQTYEDFAASLPAEE 73
          SG+AV D+    F +LK  + Y+FI+F + + + +++V E   +P  +Y+ F   LP  +
Sbjct: 4  SGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETSTDP--SYDAFLEKLPEND 61
Query: 74 CRYAVYDYDFVTAENCQKK 92
          C YA+YD+++    N  K+
Sbjct: 62 CLYAIYDFEYEINGNEGKR 80

>pdb|1TVJ|A Chain A, Solution Structure Of Chick Cofilin Length = 166

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 14 ASGMAVHDDCKLKFLELKAKRTY---------RFIVFKIEEKQKQVIVEK-----LGEPT 59
          ASG+ V+D+    F ++K +++          + ++F + + +KQ+IVE+     +G+  
Sbjct: 2  ASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIG 61
Query: 60 QTYED----FAASLPAEECRYAVYDYDFVTAEN 88
           T ED    F   LP  +CRYA+YD  + T E+
Sbjct: 62 DTVEDPYTAFVKLLPLNDCRYALYDATYETKES 94

>pdb|1Q8G|A Chain A, Nmr Structure Of Human Cofilin Length = 166

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 14 ASGMAVHDDCKLKFLELKAKRTY---------RFIVFKIEEKQKQVIVEK-----LGEPT 59
          ASG+AV D     F ++K +++          + ++F + E +K +I+E+     +G+  
Sbjct: 2  ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61
Query: 60 QTYED----FAASLPAEECRYAVYDYDFVTAEN 88
          QT +D    F   LP ++CRYA+YD  + T E+
Sbjct: 62 QTVDDPYATFVKMLPDKDCRYALYDATYETKES 94

>pdb|1AK6|A Chain A, Destrin, Nmr, Minimized Average Structure Length = 174

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 10  QANAASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEKLGEP-- 58
             N+ASG+ V D+    F ++K          K+  + ++F +   +K +IVE+  E   
Sbjct: 7   SGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILV 66
Query: 59  -------TQTYEDFAASLPAEECRYAVYDYDFVTAEN 88
                  T  ++ F   LP ++CRYA+YD  F T E+
Sbjct: 67  GDVGVTITDPFKHFVGMLPEKDCRYALYDASFETKES 103

>pdb|2LJ8|A Chain A, Solution Structure Of AdfCOFILIN FROM TRYPANOSOMA BRUCEI Length = 144

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE 72
          A SG++V D+C     +L+ K++ R+++  I + QK + V+ +GE    ++ F  ++   
Sbjct: 10 AMSGVSVADECVTALNDLRHKKS-RYVIMHIVD-QKSIAVKTIGERGANFDQFIEAIDKN 67
Query: 73 ECRYAVYDYDFVTAENCQKK 92
             YA +D+++ T +  + K
Sbjct: 68 VPCYAAFDFEYTTNDGPRDK 87

>pdb|2XFA|A Chain A, Crystal Structure Of Plasmodium Berghei Actin Depolymerization Factor 2 Length = 148

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQV--IVEKLGEPT---QTYEDF 65
           +  SG+ V D+C  +F  LK K   ++I++KIE  +K V  ++E   E T         
Sbjct: 4  GSMVSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRI 63
Query: 66 AASLPAEECRYAVYDYDFVTAE 87
            +L   ECRY + D    T E
Sbjct: 64 KNNLKNTECRYIIADMPIPTPE 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	92
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	4e-28
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	2e-23
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	2e-22
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	3e-22
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	3e-22
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	2e-21
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	3e-21
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	1e-19
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	4e-19
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	6e-18
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	1e-17
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	1e-17
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	5e-17
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	6e-17
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	1e-16
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	9e-16
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	8e-15
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	2e-06

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2 Length = 139

 Score = 98.1 bits (244), Expect = 4e-28
 Identities = 69/81 (85%), Positives = 79/81 (97%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
          ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LP
Sbjct: 2  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 71 AEECRYAVYDYDFVTAENCQK 91
          A+ECRYA+YD+DFVTAENCQK
Sbjct: 62 ADECRYAIYDFDFVTAENCQK 82

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei} Length = 148

 Score = 86.3 bits (213), Expect = 2e-23
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQT-----YEDF 65
           +  SG+ V D+C  +F  LK K   ++I++KIE  +K V+     +   T         
Sbjct: 4  GSMVSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRI 63

Query: 66 AASLPAEECRYAVYDYDFVTAENCQK 91
            +L   ECRY + D    T E   +
Sbjct: 64 KNNLKNTECRYIIADMPIPTPEGVLR 89

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A Length = 137

 Score = 83.5 bits (206), Expect = 2e-22
 Identities = 34/73 (46%), Positives = 47/73 (64%)

Query: 15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEEC 74
          SG+AV DDC  KF ELK    +R++ FK+     +V+VE +G P  TYEDF + LP  +C
Sbjct: 1  SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDC 60

Query: 75 RYAVYDYDFVTAE 87
          RYA++DY+F    
Sbjct: 61 RYAIFDYEFQVDG 73

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe} Length = 137

 Score = 82.7 bits (204), Expect = 3e-22
 Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE 72
          + SG+ V  +C   F ELK  ++ R++VFK+ + + +++VEK     + ++ F   LP +
Sbjct: 2  SFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEK 60

Query: 73 ECRYAVYDYDFVTAENCQKK 92
          +CRYA+YD++F   E  + K
Sbjct: 61 DCRYAIYDFEFNLGEGVRNK 80

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii} Length = 139

 Score = 81.3 bits (200), Expect = 2e-21
 Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 4/73 (5%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
           + ASGM V ++C  +F ELK ++T ++IVFKIE    +++VEK G+     ++F  +LP
Sbjct: 20 RHMASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGKG--NADEFRGALP 75

Query: 71 AEECRYAVYDYDF 83
          A +CR+ VYD   
Sbjct: 76 ANDCRFGVYDCGN 88

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A Length = 143

 Score = 80.5 bits (198), Expect = 3e-21
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAE 72
          + SG+AV D+    F +LK  + Y+FI+F + + + +++V++      +Y+ F   LP  
Sbjct: 2  SRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETS-TDPSYDAFLEKLPEN 60

Query: 73 ECRYAVYDYDFVTAENCQKK 92
          +C YA+YD+++    N  K+
Sbjct: 61 DCLYAIYDFEYEINGNEGKR 80

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A Length = 124

 Score = 76.2 bits (187), Expect = 1e-19
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLP 70
           +  SG+ V+D+C  +F  +K ++T  +I+F I+    ++I+   G    T  +   S+ 
Sbjct: 1  GSMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQN--CEIIIHSKGAS-TTLTELVQSID 57

Query: 71 AE---ECRYAVYDYD 82
               +C Y V+D  
Sbjct: 58 KNNEIQCAYVVFDAV 72

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A Length = 154

 Score = 75.1 bits (184), Expect = 4e-19
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 11 ANAASGMAVHDDCK--LKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAAS 68
          +++     V  + K  L+    + +     I+ K+++ ++ V++E       + E+    
Sbjct: 14 SDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLED-ELQNISPEELKLE 72

Query: 69 LPAEECRYAVYDYDFVTAENCQK 91
          LP  + R+ VY Y +V  +    
Sbjct: 73 LPERQPRFVVYSYKYVHDDGRVS 95

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens} Length = 135

 Score = 71.9 bits (176), Expect = 6e-18
 Identities = 10/76 (13%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 17 MAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRY 76
          M +  + +    +LK K    +I  K++ +++ + +              + +P +  RY
Sbjct: 2  MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVH--TEPTDVAQLPSRVPRDAARY 58

Query: 77 AVYDYDFVTAENCQKK 92
            + Y      +  + 
Sbjct: 59 HFFLYKHTHEGDPLES 74

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A Length = 164

 Score = 71.9 bits (176), Expect = 1e-17
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 10 QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASL 69
          Q        +  D      +L  K+   ++  +I+ K + +I+           D    +
Sbjct: 15 QTLQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILAN--TENTELRDLPKRI 71

Query: 70 PAEECRYAVYDYDFVTAENCQKK 92
          P +  RY  + Y      +  + 
Sbjct: 72 PKDSARYHFFLYKHSHEGDYLES 94

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M Length = 174

 Score = 72.2 bits (176), Expect = 1e-17
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 18/101 (17%)

Query: 10  QANAASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEKL----- 55
             N+ASG+ V D+    F ++K          K+  + ++F +   +K +IVE+      
Sbjct: 7   SGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILV 66

Query: 56  ----GEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK 92
                  T  ++ F   LP ++CRYA+YD  F T E+ +++
Sbjct: 67  GDVGVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEE 107

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2 Length = 151

 Score = 69.7 bits (170), Expect = 5e-17
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 10 QANAASGMAVHDDCKLKFLELKA--KRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAA 67
           + +     V +D   K  + +   +     I+ KI++ ++ V++++      + ++   
Sbjct: 7  GSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDE-ELEGVSPDELKD 65

Query: 68 SLPAEECRYAVYDYDFVTAENCQK 91
           LP  + R+ VY Y +   +    
Sbjct: 66 ELPERQPRFIVYSYKYQHDDGRVS 89

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus} Length = 166

 Score = 70.3 bits (171), Expect = 6e-17
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 18/97 (18%)

Query: 14 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEKL--------- 55
          ASG+ V+D+    F ++K          K+  + ++F + + +KQ+IVE+          
Sbjct: 2  ASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIG 61

Query: 56 GEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK 92
                Y  F   LP  +CRYA+YD  + T E+ ++ 
Sbjct: 62 DTVEDPYTAFVKLLPLNDCRYALYDATYETKESKKED 98

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus} Length = 166

 Score = 69.3 bits (169), Expect = 1e-16
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 10 QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASL 69
          Q        +  D      +L  K+   ++  +I+ K + +I+           D    +
Sbjct: 20 QTLQGVAFPISRDAFQALEKLS-KKQLNYVQLEIDIKNETIILAN--TENTELRDLPKRI 76

Query: 70 PAEECRYAVYDYDFVTAENCQKK 92
          P +  RY  + Y      +  + 
Sbjct: 77 PKDSARYHFFLYKHSHEGDYLES 99

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens} Length = 134

 Score = 66.1 bits (161), Expect = 9e-16
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYED--FAASLPA 71
          + G+   ++ K  F + +A  + R I   IE+  +Q+++    EP   ++     A LP 
Sbjct: 1  SMGIHATEELKEFFAKARAG-SVRLIKVVIED--EQLVLGASQEPVGRWDQDYDRAVLPL 57

Query: 72 EECRYAVYDYDFVTAENCQK 91
           + +   Y    + ++N Q 
Sbjct: 58 LDAQQPCYLLYRLDSQNAQG 77

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2 Length = 142

 Score = 63.9 bits (155), Expect = 8e-15
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAAS---- 68
            +G+   +D K  F   +  +   + + KI  + +Q++V     P+ ++E    S    
Sbjct: 3  HQTGIQASEDVKEIFARARNGK---YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLP 59

Query: 69 -LPAEECRYAVYDYDF 83
           L  ++  Y ++  D 
Sbjct: 60 LLEDKQPCYVLFRLDS 75

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens} Length = 146

 Score = 42.3 bits (99), Expect = 2e-06
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 8/78 (10%)

Query: 11 ANAASGMAVHDDCKLKFLE------LKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYED 64
          ++ +SGMA +       L+      +  K    + +F  E     + V   GE     E+
Sbjct: 2  SSGSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEE 59

Query: 65 FAASLPAEECRYAVYDYD 82
              L + +  YA     
Sbjct: 60 MVEELNSGKVMYAFCRVK 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	92
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	99.93
2kvk_A	144	Actin severing and dynamics regulatory protein; AD	99.92
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	99.91
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	99.91
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	99.91
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	99.91
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	99.9
2lj8_A	144	Cofilin/actin depolymerizing factor, putative; pro	99.9
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	99.89
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	99.88
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	99.88
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	99.87
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	99.85
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	99.85
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	99.84
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	99.84
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	99.83
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	99.82
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	99.81
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	99.74
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	99.67
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	99.56

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2

Probab=99.93  E-value=7.6e-26  Score=151.51  Aligned_cols=82  Identities=84%  Similarity=1.322  Sum_probs=73.5

Q ss_pred             ccccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCc
Q 034510           10 QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENC   89 (92)
Q Consensus        10 m~~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~   89 (92)
                      |+||+|||+++++|+++|++||.++++|||||+|++++++|+|++.++...+|+||.+.||+++|||++||++|++.+|+
T Consensus         1 ~~~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~   80 (139)
T 1f7s_A            1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENC   80 (139)
T ss_dssp             ----CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSC
T ss_pred             CCcCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccC
Confidence            67889999999999999999999888999999999988899999988766799999999999999999999999999987


Q ss_pred             cc
Q 034510           90 QK   91 (92)
Q Consensus        90 ~~   91 (92)
                      ++
T Consensus        81 ~~   82 (139)
T 1f7s_A           81 QK   82 (139)
T ss_dssp             EE
T ss_pred             cc
Confidence            65

>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}

Probab=99.92  E-value=9.1e-25  Score=147.56  Aligned_cols=77  Identities=22%  Similarity=0.457  Sum_probs=71.4

Q ss_pred             ccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCc
Q 034510           12 NAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENC   89 (92)
Q Consensus        12 ~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~   89 (92)
                      |++|||+|+++|+++|++||.+| +|||||+|++++++|+|++.++.+.+|++|++.||+++|||++|||+|++++|.
T Consensus         1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~~~~   77 (144)
T 2kvk_A            1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSK   77 (144)
T ss_dssp             CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEETTEE
T ss_pred             CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccCCCC
Confidence            56899999999999999999875 799999999999999999998888999999999999999999999999887763

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A

Probab=99.91  E-value=2.3e-24  Score=144.59  Aligned_cols=79  Identities=29%  Similarity=0.693  Sum_probs=69.4

Q ss_pred             ccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC-cc
Q 034510           12 NAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN-CQ   90 (92)
Q Consensus        12 ~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg-~~   90 (92)
                      ||+|||.|+++|+++|++||.++.++||||+|++++++|+|++.++ +.+|++|++.||+++|||++||++|++.+| ++
T Consensus         1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~   79 (143)
T 1cfy_A            1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK   79 (143)
T ss_dssp             -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred             CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence            5789999999999999999999999999999998888999999875 689999999999999999999999999998 65


Q ss_pred             c
Q 034510           91 K   91 (92)
Q Consensus        91 ~   91 (92)
                      |
T Consensus        80 ~   80 (143)
T 1cfy_A           80 R   80 (143)
T ss_dssp             E
T ss_pred             c
Confidence            4

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A

Probab=99.91  E-value=3e-24  Score=146.86  Aligned_cols=82  Identities=17%  Similarity=0.346  Sum_probs=71.0

Q ss_pred             ccccccCceeCHHHHHHHHHHhccC--cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCC
Q 034510           10 QANAASGMAVHDDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE   87 (92)
Q Consensus        10 m~~~~SGv~vsde~~~~f~~lK~~k--~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~d   87 (92)
                      |+.++||+.|+++|+++|++||.+|  .++||||+|++++++|+|++.++ +.+|++|++.||+++|||++|||+|++++
T Consensus        13 ~~~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~   91 (154)
T 1vkk_A           13 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDD   91 (154)
T ss_dssp             -----CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTT
T ss_pred             ccccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCC
Confidence            6778899999999999999999987  59999999999888999998653 67899999999999999999999999999


Q ss_pred             CcccC
Q 034510           88 NCQKK   92 (92)
Q Consensus        88 g~~~~   92 (92)
                      |++++
T Consensus        92 g~~~~   96 (154)
T 1vkk_A           92 GRVSY   96 (154)
T ss_dssp             SCEEC
T ss_pred             Ccccc
Confidence            87653

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}

Probab=99.91  E-value=2.9e-24  Score=143.21  Aligned_cols=76  Identities=34%  Similarity=0.777  Sum_probs=70.6

Q ss_pred             ccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           12 NAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        12 ~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      ||+|||.|+++|+++|++||.++.++||+|+|++++++|++++ +..+.+|++|++.||+++|||++|||+|++.+|
T Consensus         1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~   76 (137)
T 2i2q_A            1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG   76 (137)
T ss_dssp             -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS
T ss_pred             CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC
Confidence            5789999999999999999999889999999998888999988 556789999999999999999999999999987

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=5.9e-25  Score=148.50  Aligned_cols=80  Identities=29%  Similarity=0.544  Sum_probs=70.1

Q ss_pred             ccccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEe------eeCCCCCCHHHHHhhCCCCCceEEEEEeEe
Q 034510           10 QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVE------KLGEPTQTYEDFAASLPAEECRYAVYDYDF   83 (92)
Q Consensus        10 m~~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve------~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y   83 (92)
                      |+ |+|||.++++|+++|++||.++.+|||||+| +++++|+|+      +.++.+.+|++|++.||+++|||++|||+|
T Consensus         4 ms-m~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~   81 (148)
T 2xfa_A            4 GS-MVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPI   81 (148)
T ss_dssp             ---CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEE
T ss_pred             cc-ccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEeccc
Confidence            56 6799999999999999999999999999999 556899998      555435789999999999999999999999


Q ss_pred             ecCCCccc
Q 034510           84 VTAENCQK   91 (92)
Q Consensus        84 ~~~dg~~~   91 (92)
                      ++++|+++
T Consensus        82 ~~~~g~~~   89 (148)
T 2xfa_A           82 PTPEGVLR   89 (148)
T ss_dssp             CCSSCCCE
T ss_pred             ccCCCCcc
Confidence            99999765

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}

Probab=99.90  E-value=7.6e-24  Score=146.14  Aligned_cols=76  Identities=34%  Similarity=0.704  Sum_probs=69.3

Q ss_pred             cccCceeCHHHHHHHHHHhccC---------cceEEEEEEeCCcceEEEee--------eCCC-CCCHHHHHhhCCCCCc
Q 034510           13 AASGMAVHDDCKLKFLELKAKR---------TYRFIVFKIEEKQKQVIVEK--------LGEP-TQTYEDFAASLPAEEC   74 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k---------~~r~iifki~~~~~~Ivve~--------~~~~-~~~~~df~~~Lp~~~c   74 (92)
                      |+|||+|+++|+++|++||.+|         .+|||||+|++++++|+|++        .+++ +.+|++|++.||+++|
T Consensus         1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p   80 (166)
T 1tvj_A            1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC   80 (166)
T ss_dssp             CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred             CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence            5799999999999999999997         48999999999889999997        3433 6789999999999999


Q ss_pred             eEEEEEeEeecCCC
Q 034510           75 RYAVYDYDFVTAEN   88 (92)
Q Consensus        75 RY~vyD~~y~~~dg   88 (92)
                      ||++|||+|++++|
T Consensus        81 rY~vy~~~~~~~~~   94 (166)
T 1tvj_A           81 RYALYDATYETKES   94 (166)
T ss_dssp             EEEEEEEEEEESSC
T ss_pred             EEEEEeccccCCCC
Confidence            99999999999987

>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}

Probab=99.90  E-value=2e-23  Score=141.09  Aligned_cols=77  Identities=25%  Similarity=0.575  Sum_probs=68.8

Q ss_pred             cccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCc
Q 034510           11 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENC   89 (92)
Q Consensus        11 ~~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~   89 (92)
                      .|++|||+|+|||+++|++||.+| +|||||+|+++ ++++|+..+..+.+|++|++.||+++|||++|||.+++++|.
T Consensus         8 ~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~-~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~~   84 (144)
T 2lj8_A            8 HMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQ-KSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDGP   84 (144)
T ss_dssp             -CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETT-TEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSSS
T ss_pred             ccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECC-cEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCCC
Confidence            355799999999999999999775 79999999976 678888888788999999999999999999999999998874

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A

Probab=99.88  E-value=2.7e-22  Score=133.49  Aligned_cols=74  Identities=46%  Similarity=0.914  Sum_probs=69.6

Q ss_pred             cCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           15 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        15 SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      |||.|+++|+++|++||.++.++||+|+|++++++|++++.++.+.+|++|++.||+++|||++|+|++++.+|
T Consensus         1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~   74 (137)
T 1cnu_A            1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG   74 (137)
T ss_dssp             -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE
T ss_pred             CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC
Confidence            79999999999999999998899999999998889999998866789999999999999999999999999887

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M

Probab=99.88  E-value=6.8e-24  Score=147.42  Aligned_cols=78  Identities=33%  Similarity=0.638  Sum_probs=69.6

Q ss_pred             ccccccCceeCHHHHHHHHHHhccC---------cceEEEEEEeCCcceEEEeee--------CCC-CCCHHHHHhhCCC
Q 034510           10 QANAASGMAVHDDCKLKFLELKAKR---------TYRFIVFKIEEKQKQVIVEKL--------GEP-TQTYEDFAASLPA   71 (92)
Q Consensus        10 m~~~~SGv~vsde~~~~f~~lK~~k---------~~r~iifki~~~~~~Ivve~~--------~~~-~~~~~df~~~Lp~   71 (92)
                      |+ |+|||+|+++|+++|++||.+|         .+|||||+|++++++|+|++.        +++ +.+|++|++.||+
T Consensus         8 m~-m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~   86 (174)
T 1ak6_A            8 GN-SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPE   86 (174)
T ss_dssp             ST-TTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCS
T ss_pred             cc-ccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCC
Confidence            44 7899999999999999999995         589999999998889999873        322 6789999999999


Q ss_pred             CCceEEEEEeEeecCCC
Q 034510           72 EECRYAVYDYDFVTAEN   88 (92)
Q Consensus        72 ~~cRY~vyD~~y~~~dg   88 (92)
                      ++|||++|||+|++++|
T Consensus        87 ~~prY~ly~~~~~~~~~  103 (174)
T 1ak6_A           87 KDCRYALYDASFETKES  103 (174)
T ss_dssp             SCCCCEECCCCCCCSSC
T ss_pred             CCcEEEEEeCcccCCCC
Confidence            99999999999999887

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2

Probab=99.87  E-value=2.5e-22  Score=134.86  Aligned_cols=75  Identities=23%  Similarity=0.477  Sum_probs=61.6

Q ss_pred             ccccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCC----CHHHHHhhC-CCCCceEEEEEeEee
Q 034510           10 QANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQ----TYEDFAASL-PAEECRYAVYDYDFV   84 (92)
Q Consensus        10 m~~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~----~~~df~~~L-p~~~cRY~vyD~~y~   84 (92)
                      |+ |+|||.|+++|+++|++||.+| +|||||+|+++  +|+|++.++...    +|++|++.| |+++||||||||+++
T Consensus         1 Ms-m~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~   76 (142)
T 1m4j_A            1 MS-HQTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQ   76 (142)
T ss_dssp             -------CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEE
T ss_pred             CC-CcCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcC
Confidence            45 5799999999999999999998 99999999774  899998876553    478999998 799999999999999


Q ss_pred             cCCC
Q 034510           85 TAEN   88 (92)
Q Consensus        85 ~~dg   88 (92)
                      +.+|
T Consensus        77 ~~~~   80 (142)
T 1m4j_A           77 NAQG   80 (142)
T ss_dssp             ETTE
T ss_pred             CCCC
Confidence            8875

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}

Probab=99.85  E-value=2e-21  Score=129.34  Aligned_cols=72  Identities=25%  Similarity=0.389  Sum_probs=64.3

Q ss_pred             ccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCC----CHHHHHhhC-CCCCceEEEEEeEeecCCC
Q 034510           14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQ----TYEDFAASL-PAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        14 ~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~----~~~df~~~L-p~~~cRY~vyD~~y~~~dg   88 (92)
                      +|||+|+++|+++|++||.+| +|||||+|+++  +|+|++.++...    +|++|++.| |+++||||||||++++.+|
T Consensus         1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~~   77 (134)
T 2vac_A            1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQG   77 (134)
T ss_dssp             CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTE
T ss_pred             CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCCC
Confidence            589999999999999999998 99999999874  899999876553    478999998 6999999999999998875

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A

Probab=99.85  E-value=6.8e-22  Score=130.98  Aligned_cols=68  Identities=28%  Similarity=0.616  Sum_probs=61.2

Q ss_pred             ccccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCC---ceEEEEEeE
Q 034510           12 NAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEE---CRYAVYDYD   82 (92)
Q Consensus        12 ~~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~---cRY~vyD~~   82 (92)
                      +|+|||+|+++|+++|++||.+|++|||+|+|++  ++|+|++.++ +.+|++|++.||+++   |||+||||.
T Consensus         2 ~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~--~~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~~   72 (124)
T 3q2b_A            2 SMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQN--CEIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDAV   72 (124)
T ss_dssp             --CCSCEECHHHHHHHHHHHHHTSSEEEEEEEET--TEEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEECS
T ss_pred             CCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcC--CEEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEecC
Confidence            4679999999999999999999999999999998  4899998874 589999999999999   999999983

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2

Probab=99.84  E-value=1e-20  Score=128.54  Aligned_cols=77  Identities=18%  Similarity=0.353  Sum_probs=69.5

Q ss_pred             ccCceeCHHHHHHHHHHhccC--cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCccc
Q 034510           14 ASGMAVHDDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQK   91 (92)
Q Consensus        14 ~SGv~vsde~~~~f~~lK~~k--~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~   91 (92)
                      ...+.|+++|+++|++||.+|  .++||||+|++++++|+|++.++ +.+|++|++.||+++|||++|||+|++++|+.+
T Consensus        11 ~~~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~   89 (151)
T 1v6f_A           11 LVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDGRVS   89 (151)
T ss_dssp             CCCCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTSCEE
T ss_pred             ceEEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCCccc
Confidence            346999999999999999987  59999999999888999998763 678999999999999999999999999998754

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A

Probab=99.84  E-value=9e-21  Score=130.95  Aligned_cols=71  Identities=17%  Similarity=0.403  Sum_probs=64.7

Q ss_pred             ccCc--eeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCC
Q 034510           14 ASGM--AVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE   87 (92)
Q Consensus        14 ~SGv--~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~d   87 (92)
                      ++||  .|+++|+++|++||.++ ++||||+|++++++|+|++.  .+.+|++|.+.||+++|||+||||+|++++
T Consensus        17 ~~gv~~~v~~e~~~a~~~lk~~~-~~~iifkId~~~e~I~v~~~--~~~~~~df~~~Lp~~~pRY~vyd~~~~~~g   89 (164)
T 3daw_B           17 LQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILANT--ENTELRDLPKRIPKDSARYHFFLYKHSHEG   89 (164)
T ss_dssp             -CCCCCCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEEC--CCCCGGGSGGGSCSSSCEEEEEEEEEEETT
T ss_pred             cCcceEEECHHHHHHHHHHHcCC-ceEEEEEEeCCCCEEEEEeC--CCCCHHHHHHhCCccCceEEEEecccccCC
Confidence            5677  79999999999999984 89999999998899999986  468999999999999999999999998874

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}

Probab=99.83  E-value=1.9e-20  Score=124.84  Aligned_cols=69  Identities=14%  Similarity=0.358  Sum_probs=64.5

Q ss_pred             ceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           17 MAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        17 v~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      |.|+++|+++|++||.++ ++||||+|++++++|+|++.+  +.+|++|.+.||+++|||++|||+|++++|
T Consensus         2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~   70 (135)
T 2w0i_A            2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEGD   70 (135)
T ss_dssp             CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETTE
T ss_pred             cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCCC
Confidence            679999999999999988 999999999988899999875  679999999999999999999999998876

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}

Probab=99.82  E-value=1.9e-20  Score=129.23  Aligned_cols=72  Identities=18%  Similarity=0.409  Sum_probs=67.6

Q ss_pred             ccCce--eCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           14 ASGMA--VHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        14 ~SGv~--vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      +|||.  |+++|+++|++||.+ .++||||+|++++++|+|++.+  +.+|++|.+.||+++|||++|||+|++++|
T Consensus        22 ~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~   95 (166)
T 2d8b_A           22 LQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD   95 (166)
T ss_dssp             SCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE
T ss_pred             cCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC
Confidence            59999  999999999999998 7999999999988999999875  678999999999999999999999999887

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}

Probab=99.81  E-value=9.9e-20  Score=122.82  Aligned_cols=64  Identities=47%  Similarity=0.917  Sum_probs=60.2

Q ss_pred             cccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEE
Q 034510           13 AASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYD   80 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD   80 (92)
                      |+|||.++++|+++|++||.++++|||+|+|++  ++|+|++.++ + +|++|++.||+++|||++||
T Consensus        22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~   85 (139)
T 2l72_A           22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD   85 (139)
T ss_dssp             CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE
T ss_pred             ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc
Confidence            679999999999999999999889999999998  6799998876 5 99999999999999999999

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2

Probab=99.74  E-value=6.4e-18  Score=112.96  Aligned_cols=66  Identities=12%  Similarity=0.278  Sum_probs=59.3

Q ss_pred             cccCceeC---HHHHHHHHHHhccC--cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeE
Q 034510           13 AASGMAVH---DDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYD   82 (92)
Q Consensus        13 ~~SGv~vs---de~~~~f~~lK~~k--~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~   82 (92)
                      .|++|.++   ++|+++|++||.+|  .++||+|+|++ +++|+|++.|+   +|++|++.||+++|||++|+++
T Consensus         2 ~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~   72 (141)
T 1hqz_1            2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS   72 (141)
T ss_dssp             -CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC
T ss_pred             cccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe
Confidence            36788885   99999999999986  79999999998 56899998874   8999999999999999999997

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}

Probab=99.67  E-value=2.3e-16  Score=106.46  Aligned_cols=70  Identities=19%  Similarity=0.313  Sum_probs=62.3

Q ss_pred             cccCceeC-----HHHHHHHHHHhccCc-ceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEee
Q 034510           13 AASGMAVH-----DDCKLKFLELKAKRT-YRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFV   84 (92)
Q Consensus        13 ~~SGv~vs-----de~~~~f~~lK~~k~-~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~   84 (92)
                      .+||..|+     ++|+++|+++|.++. +|||||+|+++.++|+|+..|+  .+|+||++.||+++|||++||++++
T Consensus         4 ~~~~m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~~   79 (146)
T 1x67_A            4 GSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKDP   79 (146)
T ss_dssp             SSSSSCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEECS
T ss_pred             cccceEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEcC
Confidence            35777777     999999999999985 9999999998777999998874  5899999999999999999999864

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A

Probab=99.56  E-value=1.2e-14  Score=97.67  Aligned_cols=66  Identities=11%  Similarity=0.337  Sum_probs=56.7

Q ss_pred             CHHHHHHHHHHhccC-cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCccc
Q 034510           20 HDDCKLKFLELKAKR-TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQK   91 (92)
Q Consensus        20 sde~~~~f~~lK~~k-~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~   91 (92)
                      +|+|+++|+++|..+ .++||||+++++  +|+|+..|+   .|+||++.||+++|||++||+. .+.+++.|
T Consensus         6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~   72 (141)
T 1t3y_A            6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKR   72 (141)
T ss_dssp             HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCE
T ss_pred             hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCce
Confidence            589999999999988 499999999883  499999885   4999999999999999999995 55555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	92
d1f7sa_	124	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	2e-30
d1cnua_	134	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	3e-25
d1ak7a_	174	d.109.1.2 (A:) Destrin {Human and pig (Homo sapien	2e-24
d1cfya_	133	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	3e-21
d1q8ga_	166	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	9e-20
d1vkka_	137	d.109.1.2 (A:) Glia maturation factor gamma, GMF-g	8e-17
d1m4ja_	133	d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1	4e-11
d1t3ya1	130	d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (	3e-08
d1hqz1_	139	d.109.1.2 (1:) Cofilin-like domain of actin-bindin	1e-06

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]} Length = 124

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

 Score =  102 bits (255), Expect = 2e-30
 Identities = 66/78 (84%), Positives = 76/78 (97%)

Query: 14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEE 73
          ASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LPA+E
Sbjct: 1  ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADE 60

Query: 74 CRYAVYDYDFVTAENCQK 91
          CRYA+YD+DFVTAENCQK
Sbjct: 61 CRYAIYDFDFVTAENCQK 78

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

 Score = 89.2 bits (221), Expect = 3e-25
 Identities = 34/77 (44%), Positives = 48/77 (62%)

Query: 16 GMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECR 75
          G+AV DDC  KF ELK    +R++ FK+     +V+VE +G P  TYEDF + LP  +CR
Sbjct: 1  GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCR 60

Query: 76 YAVYDYDFVTAENCQKK 92
          YA++DY+F      + K
Sbjct: 61 YAIFDYEFQVDGGQRNK 77

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 2e-24
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 18/101 (17%)

Query: 10  QANAASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEKLGE--- 57
             N+ASG+ V D+    F ++K          K+  + ++F +   +K +IVE+  E   
Sbjct: 7   SGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILV 66

Query: 58  ------PTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK 92
                  T  ++ F   LP ++CRYA+YD  F T E+ +++
Sbjct: 67  GDVGVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEE 107

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 133

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.2 bits (195), Expect = 3e-21
 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 17 MAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRY 76
          +AV D+    F +LK  + Y+FI+F + + + +++V++      +Y+ F   LP  +C Y
Sbjct: 1  VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKE-TSTDPSYDAFLEKLPENDCLY 59

Query: 77 AVYDYDFVTAENCQKK 92
          A+YD+++    N  K+
Sbjct: 60 AIYDFEYEINGNEGKR 75

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]} Length = 166

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 9e-20
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 18/97 (18%)

Query: 14 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEKLGEPT----- 59
          ASG+AV D     F ++K          K+  + ++F + E +K +I+E+  E       
Sbjct: 2  ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61

Query: 60 ----QTYEDFAASLPAEECRYAVYDYDFVTAENCQKK 92
                Y  F   LP ++CRYA+YD  + T E+ ++ 
Sbjct: 62 QTVDDPYATFVKMLPDKDCRYALYDATYETKESKKED 98

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.9 bits (166), Expect = 8e-17
 Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 19 VHDDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRY 76
          V  + K    + + ++      I+ K+++ ++ V++E   +   + E+    LP  + R+
Sbjct: 5  VDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNI-SPEELKLELPERQPRF 63

Query: 77 AVYDYDFVTAENCQK 91
           VY Y +V  +    
Sbjct: 64 VVYSYKYVHDDGRVS 78

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 133

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.0 bits (127), Expect = 4e-11
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 18 AVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDF-----AASLPAE 72
             +D K  F   +     ++ + KI  + +Q++V     P+ ++E          L  +
Sbjct: 2  QASEDVKEIFARAR---NGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDK 58

Query: 73 ECRYAVYDYDFVTAE 87
          +  Y ++  D   A+
Sbjct: 59 QPCYVLFRLDSQNAQ 73

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 3e-08
 Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 21 DDCKLKFLELKAKRT-YRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVY 79
          + C+  +  ++   +   ++ FK +           GE    Y+ F      +   +A  
Sbjct: 7  EACRAAYNLVRDDGSAVIWVTFKYDGSTIVP-----GEQGAEYQHFIQQCTDDVRLFAFV 61

Query: 80 DYDFVTAENCQKK 92
           +    A + + K
Sbjct: 62 RFTTGDAMSKRSK 74

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.7 bits (98), Expect = 1e-06
 Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 4/51 (7%)

Query: 33 KRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDF 83
               +++     K K+   E  G    ++ DF       + +Y +     
Sbjct: 25 DPDTTWLIISPNAK-KEYEPESTGS---SFHDFLQLFDETKVQYGLARVSP 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	92
d1f7sa_	124	Cofilin (actin depolymerizing factor, ADF) {Plant	99.93
d1cnua_	134	Cofilin (actin depolymerizing factor, ADF) {Acanth	99.89
d1q8ga_	166	Cofilin (actin depolymerizing factor, ADF) {Human	99.86
d1ak7a_	174	Destrin {Human and pig (Homo sapiens) and (Sus scr	99.86
d1cfya_	133	Cofilin (actin depolymerizing factor, ADF) {Baker'	99.85
d1vkka_	137	Glia maturation factor gamma, GMF-gamma {Mouse (Mu	99.84
d1m4ja_	133	Adf-H domain of twinfilin isoform-1 {Mouse (Mus mu	99.52
d1t3ya1	130	Coactosin-like protein Cotl1 (Clp) {Human (Homo sa	99.38
d1hqz1_	139	Cofilin-like domain of actin-binding protein abp1p	99.38

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

Probab=99.93  E-value=2.6e-26  Score=149.80  Aligned_cols=78  Identities=85%  Similarity=1.357  Sum_probs=74.2

Q ss_pred             ccCceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCccc
Q 034510           14 ASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQK   91 (92)
Q Consensus        14 ~SGv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~   91 (92)
                      +|||+|+|+|+++|++||.++++|||||+|++++++|+|++.++.+.+|++|++.||+++|||++|||.+.+++|+.+
T Consensus         1 aSGi~v~de~~~~f~~lk~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~~ry~~~~~~~~~~~~~~~   78 (124)
T d1f7sa_           1 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQK   78 (124)
T ss_dssp             CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEE
T ss_pred             CCCeEeCHHHHHHHHHHhcCCCceEEEEEEeCCCcEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEEEEecCCCCcc
Confidence            589999999999999999999999999999999899999999887899999999999999999999999999998755

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

Probab=99.89  E-value=2.7e-23  Score=136.90  Aligned_cols=73  Identities=45%  Similarity=0.917  Sum_probs=69.2

Q ss_pred             CceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           16 GMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        16 Gv~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      ||+|+|||+++|++||.+++++|+||+|++++++|+|++.++.+.+|++|++.||+++|||++|||+++++++
T Consensus         1 Gi~v~~e~~~a~~~lk~~~~~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~l~~~~~ry~~~~~~~~~~~~   73 (134)
T d1cnua_           1 GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG   73 (134)
T ss_dssp             CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE
T ss_pred             CceeCHHHHHHHHHHhcCCCeEEEEEEEeCCCeEEEEEecCCCCCCHHHHHHhCCCCCceEEEEEeeecCCCC
Confidence            8999999999999999999999999999999899999999878899999999999999999999999988654

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

Probab=99.86  E-value=1.2e-22  Score=138.22  Aligned_cols=77  Identities=34%  Similarity=0.604  Sum_probs=68.3

Q ss_pred             cccCceeCHHHHHHHHHHhcc---------CcceEEEEEEeCCcceEEEeeeCC---------CCCCHHHHHhhCCCCCc
Q 034510           13 AASGMAVHDDCKLKFLELKAK---------RTYRFIVFKIEEKQKQVIVEKLGE---------PTQTYEDFAASLPAEEC   74 (92)
Q Consensus        13 ~~SGv~vsde~~~~f~~lK~~---------k~~r~iifki~~~~~~Ivve~~~~---------~~~~~~df~~~Lp~~~c   74 (92)
                      |+|||+|+++|+++|++||++         +.+||+||+|+++.++|++++..+         .+.+|++|++.||+++|
T Consensus         1 MsSGi~vs~e~~~~f~~lK~~~~~~~~~~~~~~~~vi~kI~~~~~~Ivv~~~~e~~~~~~~~~~~~~~~e~~~~l~~~~p   80 (166)
T d1q8ga_           1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDC   80 (166)
T ss_dssp             CCSCCCCCSHHHHHHHHHHHCCCCSHHHHTSCEEEEEEEECSSSSCEEEEEEEEEESGGGTTTCSCHHHHHHHTCCTTSC
T ss_pred             CCCCcCcCHHHHHHHHHHHhccccchhhhccccceEEEEEcCCCcEEEEecccccccccccccccchHHHHHHhCCCCCc
Confidence            569999999999999999975         459999999999999999986532         25679999999999999


Q ss_pred             eEEEEEeEeecCCCc
Q 034510           75 RYAVYDYDFVTAENC   89 (92)
Q Consensus        75 RY~vyD~~y~~~dg~   89 (92)
                      ||++|||+|++.+|+
T Consensus        81 rY~v~d~~~~~~~~~   95 (166)
T d1q8ga_          81 RYALYDATYETKESK   95 (166)
T ss_dssp             BCCCEECCEEBSSCE
T ss_pred             EEEEEEeecccCCCC
Confidence            999999999999884

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

Probab=99.86  E-value=2.3e-23  Score=143.26  Aligned_cols=84  Identities=32%  Similarity=0.569  Sum_probs=72.6

Q ss_pred             ccccccccccCceeCHHHHHHHHHHhcc---------CcceEEEEEEeCCcceEEEeeeCC---------CCCCHHHHHh
Q 034510            6 LFYLQANAASGMAVHDDCKLKFLELKAK---------RTYRFIVFKIEEKQKQVIVEKLGE---------PTQTYEDFAA   67 (92)
Q Consensus         6 ~~~~m~~~~SGv~vsde~~~~f~~lK~~---------k~~r~iifki~~~~~~Ivve~~~~---------~~~~~~df~~   67 (92)
                      ++-+.+.++|||+|++||+++|++||++         |++|||||+|++++++|++++..+         .+.+|++|++
T Consensus         3 ~~~~~~ss~SGI~v~de~~~~f~elK~~~~~~~~~~kk~~r~ii~kI~~~~~~Iv~~~~~~~~~~~~~~~~~~~~~d~~~   82 (174)
T d1ak7a_           3 ITPSSGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVG   82 (174)
T ss_dssp             CCCCSSSTTCCCCCCSSHHHHTTSSSSTTCSSHHHHTTSCCEEEECCCSSSCSSCCCSSCCCCSSSTTTTCCSSSHHHHH
T ss_pred             cccccCcCCCCcEeCHHHHHHHHHHhhccccchhhhccceeEEEEEEcCCCeEEEEeccccccccccccccchhHHHHHH
Confidence            4445566899999999999999999975         569999999999999999987643         2467999999


Q ss_pred             hCCCCCceEEEEEeEeecCCCc
Q 034510           68 SLPAEECRYAVYDYDFVTAENC   89 (92)
Q Consensus        68 ~Lp~~~cRY~vyD~~y~~~dg~   89 (92)
                      .||+++|||+||||++.+++|+
T Consensus        83 ~l~~~~prY~vyd~~~~~~~~~  104 (174)
T d1ak7a_          83 MLPEKDCRYALYDASFETKESR  104 (174)
T ss_dssp             HSCSSSCCEEEECCCCCBSSCS
T ss_pred             hCCCCCceEEEEEeeccCCCCC
Confidence            9999999999999999988764

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=2.6e-21  Score=126.70  Aligned_cols=71  Identities=30%  Similarity=0.729  Sum_probs=65.7

Q ss_pred             ceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCC
Q 034510           17 MAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        17 v~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      |+|+|||+++|++||.+|++|||||+|++++.+|++++.+ .+.+|++|++.||+++|||++|||+|.++++
T Consensus         1 i~vs~e~~~a~~~lk~~k~~~~vi~~i~~~~~~vv~~~~~-~~~~~~~~~~~l~~~~pry~v~~~~~~~~~~   71 (133)
T d1cfya_           1 VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETS-TDPSYDAFLEKLPENDCLYAIYDFEYEINGN   71 (133)
T ss_dssp             CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEE-CCCCHHHHHTTSCTTCCEEEEEEEEEECSSS
T ss_pred             CccCHHHHHHHHHHHcCCCeEEEEEEEcCCceEEEEecCC-CCCCHHHHHHhCCccCceEEEEEeeeecccC
Confidence            6899999999999999999999999999988888888765 6789999999999999999999999988875

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=4.8e-21  Score=127.33  Aligned_cols=75  Identities=19%  Similarity=0.379  Sum_probs=68.1

Q ss_pred             ceeCHHHHHHHHHHhccC--cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCCCcccC
Q 034510           17 MAVHDDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKK   92 (92)
Q Consensus        17 v~vsde~~~~f~~lK~~k--~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~dg~~~~   92 (92)
                      ++|+|||+++|++||+++  +++||+|+|+.++.+|++++.. .+.+|++|++.||+++|||+||||+|++++|+.++
T Consensus         3 ~~v~~e~~~~l~~~k~~~~~~~~~ii~~Id~~~~~iv~~~~~-~~~~~~~~~~~lp~~~prY~vy~~~~~~~~g~~~~   79 (137)
T d1vkka_           3 CEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDEL-QNISPEELKLELPERQPRFVVYSYKYVHDDGRVSY   79 (137)
T ss_dssp             CEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEE-ESCCHHHHHHHSCSSSCEEEEEECCEECTTSCEEC
T ss_pred             EEcCHHHHHHHHHHHhccCCCCCEEEEEECCCceEEEEEecC-CCCCHHHHHhhCCCCCcEEEEEEcccccCCCCccc
Confidence            789999999999999865  5999999999998888888764 57899999999999999999999999999997664

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=1.5e-14  Score=94.69  Aligned_cols=69  Identities=20%  Similarity=0.414  Sum_probs=57.2

Q ss_pred             ceeCHHHHHHHHHHhccCcceEEEEEEeCCcceEEEeeeCCCCCC----HHHHH-hhCCCCCceEEEEEeEeecCCC
Q 034510           17 MAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQT----YEDFA-ASLPAEECRYAVYDYDFVTAEN   88 (92)
Q Consensus        17 v~vsde~~~~f~~lK~~k~~r~iifki~~~~~~Ivve~~~~~~~~----~~df~-~~Lp~~~cRY~vyD~~y~~~dg   88 (92)
                      |+++++|+++|+++|.   .+|++|+|+.++++|+|++.++...+    |++|+ +.||+++|||++|||++++.+|
T Consensus         1 I~~s~e~~~~f~~~k~---~~~~~~~i~~~~~~ivv~~~~~~~~~~~~~~~~~l~~~l~~~~prY~~~~~~~~~~~~   74 (133)
T d1m4ja_           1 IQASEDVKEIFARARN---GKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQG   74 (133)
T ss_dssp             CCBCHHHHHHHHHHHT---TTCSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTE
T ss_pred             CCcCHHHHHHHHhccC---CCEEEEEEEeCCcEEEEEEecCCCccchhhHHHHHhhcCCCCCcEEEEEEecCCCCCc
Confidence            6799999999999974   36889999988889999998766665    44555 4578899999999999998775

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.5e-12  Score=84.59  Aligned_cols=66  Identities=12%  Similarity=0.320  Sum_probs=54.6

Q ss_pred             ceeCHH-HHHHHHHHhccC-cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeecCC
Q 034510           17 MAVHDD-CKLKFLELKAKR-TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE   87 (92)
Q Consensus        17 v~vsde-~~~~f~~lK~~k-~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~~d   87 (92)
                      .+|+++ |.++|++++..+ .++|++|++++  +++++.+.+   .+|+||++.||+++|||++|++.+..++
T Consensus         2 ~~vd~e~~~~a~~~vr~~~~~~~w~if~~d~--~~~v~~~~~---~~~~e~~~~l~~~~~~y~~~r~~~~~~~   69 (130)
T d1t3ya1           2 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDG--STIVPGEQG---AEYQHFIQQCTDDVRLFAFVRFTTGDAM   69 (130)
T ss_dssp             CEECHHHHHHHHHHHHCTTSSCCEEEEEEET--TEEEEEEEE---SSHHHHHHHCCTTCEEEEEEEEEECSGG
T ss_pred             cccCHHHHHHHHHHHHcCCCCcEEEEEEeCC--CEEEEcCCC---CCHHHHHHhCCCCceEEEEEEEEecCCC
Confidence            467766 668999999976 59999999986  467776543   5799999999999999999999986544

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=4.9e-13  Score=88.11  Aligned_cols=65  Identities=12%  Similarity=0.243  Sum_probs=56.1

Q ss_pred             ceeCHHHHHHHHHHhccC--cceEEEEEEeCCcceEEEeeeCCCCCCHHHHHhhCCCCCceEEEEEeEeec
Q 034510           17 MAVHDDCKLKFLELKAKR--TYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVT   85 (92)
Q Consensus        17 v~vsde~~~~f~~lK~~k--~~r~iifki~~~~~~Ivve~~~~~~~~~~df~~~Lp~~~cRY~vyD~~y~~   85 (92)
                      -+.+++|.++|++++..+  ..+|+||+++++ ++|+|+..|   .+|+||++.||+++|||++|++.+++
T Consensus         7 ~t~s~ei~~ay~~v~~~~~~~~~wvi~~~~~~-~~i~v~~~g---~~~~e~~~~l~~~~~~Y~~~r~~~~~   73 (139)
T d1hqz1_           7 TTHSREIDAEYLKIVRGSDPDTTWLIISPNAK-KEYEPESTG---SSFHDFLQLFDETKVQYGLARVSPPG   73 (139)
T ss_dssp             STTHHHHHHHHHHHHHTCCTTCCEEEEEECTT-SCEEEEEEE---SCHHHHHTCCCTTSCEEEEEEECCTT
T ss_pred             ccCCHHHHHHHHHHHhCCCCCccEEEEEECCC-cEEEEecCC---CCHHHHHHhcCCCceEEEEEEEecCC
Confidence            456899999999987654  389999999985 788888876   47999999999999999999998654