Citrus Sinensis ID: 034565

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MAIDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Secondary Structure (PSIPRED)
ccEEEccccEEEcEEccEEEEEEcEEcccccEEEEEHHHHHHHHHcccEEEEEEEEEcccEEEEEEEEccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccEcEEEccEEEEEEEEccccccEEEEcHHHHHHHHHcccEEEEEEEEEEcccEEEEEEEccccccHHHccHHcEEEcccccc
Coil and Loop (DISEMBL)
MAIDVDRTIQAVTRvkpyictmplrlddgwNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRriyfsdrlyseeelppefklylpmqkt
Flexible Loop (DISEMBL)
maidvdrtiqavtrvkpyICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVEtlrvqvhancRLRRIYFsdrlyseeelppefklylpmqkt
Low Complexity Region (SEG)
MAIDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Disordered region (IsUnstruct)
****VDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSE****************
Disordered Region (DISOPRED)
**IDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPM***
Disordered Region (DISEMBL)
MAIDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Disordered Region (DISPRO)
MAIDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPM***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAIDVDRTIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
Q9VKV8	199	UPF0468 protein CG5343 OS	yes	no	0.890	0.407	0.839	3e-39
Q6PBJ2	192	UPF0468 protein C16orf80	yes	no	0.879	0.416	0.837	2e-38
Q6GL74	193	UPF0468 protein C16orf80	yes	no	0.879	0.414	0.837	2e-38
Q6GPY6	193	UPF0468 protein C16orf80	N/A	no	0.879	0.414	0.837	2e-38
Q8BTU1	193	UPF0468 protein C16orf80	yes	no	0.879	0.414	0.837	2e-38
Q5ZHP3	193	UPF0468 protein C16orf80	yes	no	0.879	0.414	0.837	2e-38
Q6B857	193	UPF0468 protein C16orf80	yes	no	0.879	0.414	0.837	2e-38
Q9Y6A4	193	UPF0468 protein C16orf80	yes	no	0.879	0.414	0.837	4e-38
Q61JK7	203	UPF0468 protein C16orf80	N/A	no	0.879	0.394	0.75	7e-36
Q86D25	203	UPF0468 protein C16orf80	yes	no	0.879	0.394	0.75	8e-36

>sp|Q9VKV8|U0468_DROME UPF0468 protein CG5343 OS=Drosophila melanogaster GN=CG5343 PE=1 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 79/81 (97%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQK 90
           DRLYSE+ELPPEFKL+LP+QK
Sbjct: 169 DRLYSEDELPPEFKLFLPIQK 189

Drosophila melanogaster (taxid: 7227)

>sp|Q6PBJ2|CP080_DANRE UPF0468 protein C16orf80 homolog OS=Danio rerio GN=zgc:73380 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Danio rerio (taxid: 7955)

>sp|Q6GL74|CP080_XENTR UPF0468 protein C16orf80 homolog OS=Xenopus tropicalis PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Xenopus tropicalis (taxid: 8364)

>sp|Q6GPY6|CP080_XENLA UPF0468 protein C16orf80 homolog OS=Xenopus laevis PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Xenopus laevis (taxid: 8355)

>sp|Q8BTU1|CP080_MOUSE UPF0468 protein C16orf80 homolog OS=Mus musculus GN=Gtl3 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Mus musculus (taxid: 10090)

>sp|Q5ZHP3|CP080_CHICK UPF0468 protein C16orf80 homolog OS=Gallus gallus GN=RCJMB04_34o2 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Gallus gallus (taxid: 9031)

>sp|Q6B857|CP080_BOVIN UPF0468 protein C16orf80 homolog OS=Bos taurus PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Bos taurus (taxid: 9913)

>sp|Q9Y6A4|CP080_HUMAN UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf80 PE=1 SV=1

 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 76/80 (95%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSE+ELP EFKLYLP+Q
Sbjct: 169 DRLYSEDELPAEFKLYLPVQ 188

Homo sapiens (taxid: 9606)

>sp|Q61JK7|CP080_CAEBR UPF0468 protein C16orf80 homolog OS=Caenorhabditis briggsae GN=CBG09753 PE=3 SV=1

 Score =  149 bits (375), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 76/80 (95%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+
Sbjct: 109 QSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFA 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLY+E+ELP EFKLYLP++
Sbjct: 169 DRLYTEDELPAEFKLYLPIR 188

Caenorhabditis briggsae (taxid: 6238)

>sp|Q86D25|CP080_CAEEL UPF0468 protein C16orf80 homolog OS=Caenorhabditis elegans GN=C54C6.6 PE=3 SV=1

 Score =  148 bits (374), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 76/80 (95%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+
Sbjct: 109 QSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFA 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLY+E+ELP EFKLYLP++
Sbjct: 169 DRLYTEDELPAEFKLYLPIR 188

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
255578235	186	orf protein, putative [Ricinus communis]	0.901	0.440	0.939	5e-41
388517243	190	unknown [Lotus japonicus]	0.923	0.442	0.916	5e-41
225464011	190	PREDICTED: UPF0468 protein CG5343 [Vitis	0.912	0.436	0.939	1e-40
357515357	218	hypothetical protein MTR_8g040630 [Medic	0.901	0.376	0.926	2e-40
356530569	190	PREDICTED: UPF0468 protein CG5343-like [	0.923	0.442	0.904	3e-40
217074284	189	unknown [Medicago truncatula] gi|3884951	0.912	0.439	0.915	3e-40
116791609	190	unknown [Picea sitchensis]	0.901	0.431	0.926	3e-40
297744360	224	unnamed protein product [Vitis vinifera]	0.879	0.357	0.95	6e-40
356548806	190	PREDICTED: LOW QUALITY PROTEIN: UPF0468	0.923	0.442	0.892	6e-40
147781661	199	hypothetical protein VITISV_021801 [Viti	0.890	0.407	0.938	9e-40

>gi|255578235|ref|XP_002529985.1| orf protein, putative [Ricinus communis] gi|223530508|gb|EEF32390.1| orf protein, putative [Ricinus communis]

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/82 (93%), Positives = 81/82 (98%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           QA+TRVKPYICTMPL++D+GWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS
Sbjct: 105 QAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 164

Query: 70  DRLYSEEELPPEFKLYLPMQKT 91
           DRLYSEEELPPEFKLYLPMQK 
Sbjct: 165 DRLYSEEELPPEFKLYLPMQKA 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517243|gb|AFK46683.1| unknown [Lotus japonicus]

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 81/84 (96%)

Query: 8   TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIY 67
             QAVTRVKPYICTMPL++DDGWNQIQ NLADFT+RAYGTNYVETLRVQVHANCRLRRIY
Sbjct: 107 NFQAVTRVKPYICTMPLKMDDGWNQIQFNLADFTKRAYGTNYVETLRVQVHANCRLRRIY 166

Query: 68  FSDRLYSEEELPPEFKLYLPMQKT 91
           FSDRLYSEEELPPEFKLYLPMQK+
Sbjct: 167 FSDRLYSEEELPPEFKLYLPMQKS 190

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464011|ref|XP_002265223.1| PREDICTED: UPF0468 protein CG5343 [Vitis vinifera] gi|296087820|emb|CBI35076.3| unnamed protein product [Vitis vinifera]

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 78/83 (93%), Positives = 80/83 (96%)

Query: 9   IQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYF 68
            QAVTRVKPYICTMPLR+D+GWN IQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYF
Sbjct: 108 FQAVTRVKPYICTMPLRMDEGWNTIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYF 167

Query: 69  SDRLYSEEELPPEFKLYLPMQKT 91
           SDRLYSEEELPPEFKLYLPMQK 
Sbjct: 168 SDRLYSEEELPPEFKLYLPMQKA 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357515357|ref|XP_003627967.1| hypothetical protein MTR_8g040630 [Medicago truncatula] gi|355521989|gb|AET02443.1| hypothetical protein MTR_8g040630 [Medicago truncatula]

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/82 (92%), Positives = 80/82 (97%)

Query: 9   IQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYF 68
            QAVTRVKPYICTMPLR+D+GWNQIQ NLADFT++AYGTNYVETLRVQVHANCRLRRIYF
Sbjct: 137 FQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKKAYGTNYVETLRVQVHANCRLRRIYF 196

Query: 69  SDRLYSEEELPPEFKLYLPMQK 90
           SDRLYSEEELPPEFKLYLPMQK
Sbjct: 197 SDRLYSEEELPPEFKLYLPMQK 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530569|ref|XP_003533853.1| PREDICTED: UPF0468 protein CG5343-like [Glycine max]

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/84 (90%), Positives = 80/84 (95%)

Query: 8   TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIY 67
             QAVTRVKPYICTMPLR+D+GWNQIQ NL DFT+RAYGTNYVETLRVQVHANCRLRRIY
Sbjct: 107 NFQAVTRVKPYICTMPLRMDEGWNQIQFNLVDFTKRAYGTNYVETLRVQVHANCRLRRIY 166

Query: 68  FSDRLYSEEELPPEFKLYLPMQKT 91
           FSDRLYSEEELPPEFKLYLPMQK+
Sbjct: 167 FSDRLYSEEELPPEFKLYLPMQKS 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074284|gb|ACJ85502.1| unknown [Medicago truncatula] gi|388495166|gb|AFK35649.1| unknown [Medicago truncatula]

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/83 (91%), Positives = 80/83 (96%)

Query: 8   TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIY 67
             QAVTRVKPYICTMPLR+D+GWNQIQ NLADFT++AYGTNYVETLRVQVHANCRLRRIY
Sbjct: 107 NFQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKKAYGTNYVETLRVQVHANCRLRRIY 166

Query: 68  FSDRLYSEEELPPEFKLYLPMQK 90
           FSDRLYSEEELPPEFKLYLPMQK
Sbjct: 167 FSDRLYSEEELPPEFKLYLPMQK 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116791609|gb|ABK26040.1| unknown [Picea sitchensis]

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/82 (92%), Positives = 80/82 (97%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           QA+TRVKPYICTMPLRLDDGWNQIQ NL DFTRRAYGTNYVETLRVQVHANCR+RRIYFS
Sbjct: 109 QAITRVKPYICTMPLRLDDGWNQIQFNLTDFTRRAYGTNYVETLRVQVHANCRIRRIYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQKT 91
           DRLYSEEELPPEFKLYLP+QK+
Sbjct: 169 DRLYSEEELPPEFKLYLPIQKS 190

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744360|emb|CBI37330.3| unnamed protein product [Vitis vinifera]

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 76/80 (95%), Positives = 79/80 (98%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           QAVTRVKPYICTMPLR+D+GWN IQLNLADFTRRAYGTNYVETLRV+VHANCRLRRIYFS
Sbjct: 109 QAVTRVKPYICTMPLRMDEGWNTIQLNLADFTRRAYGTNYVETLRVKVHANCRLRRIYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQ 89
           DRLYSEEELPPEFKLYLPMQ
Sbjct: 169 DRLYSEEELPPEFKLYLPMQ 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548806|ref|XP_003542790.1| PREDICTED: LOW QUALITY PROTEIN: UPF0468 protein CG5343-like [Glycine max]

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 75/84 (89%), Positives = 81/84 (96%)

Query: 8   TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIY 67
             QAVTRVKPY+CTMPLR+D+GWNQIQ NLADFT+RAYGTNYVETL+VQVHANCRLRRIY
Sbjct: 107 NFQAVTRVKPYMCTMPLRMDEGWNQIQFNLADFTKRAYGTNYVETLQVQVHANCRLRRIY 166

Query: 68  FSDRLYSEEELPPEFKLYLPMQKT 91
           FSDRLYSEEELPPEFKLYLPMQK+
Sbjct: 167 FSDRLYSEEELPPEFKLYLPMQKS 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147781661|emb|CAN62739.1| hypothetical protein VITISV_021801 [Vitis vinifera]

 Score =  167 bits (422), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 76/81 (93%), Positives = 79/81 (97%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
           QAVTRVKPYICTMPLR+D+GWN IQLNLADFTRRAYGTNYVETLRV+VHANCRLRRIYFS
Sbjct: 109 QAVTRVKPYICTMPLRMDEGWNTIQLNLADFTRRAYGTNYVETLRVKVHANCRLRRIYFS 168

Query: 70  DRLYSEEELPPEFKLYLPMQK 90
           DRLYSEEELPPEFKLYLPMQ 
Sbjct: 169 DRLYSEEELPPEFKLYLPMQS 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
TAIR|locus:2082184	190	BUG22 "AT3G12300" [Arabidopsis	0.890	0.426	0.901	7e-38
FB|FBgn0032248	199	CG5343 [Drosophila melanogaste	0.890	0.407	0.839	1.3e-36
UNIPROTKB|Q5ZHP3	193	RCJMB04_34o2 "UPF0468 protein	0.879	0.414	0.837	5.7e-36
UNIPROTKB|Q6B857	193	Q6B857 "UPF0468 protein C16orf	0.879	0.414	0.837	5.7e-36
UNIPROTKB|E2R3J4	193	C16orf80 "Uncharacterized prot	0.879	0.414	0.837	5.7e-36
UNIPROTKB|F2Z513	193	C16orf80 "Uncharacterized prot	0.879	0.414	0.837	5.7e-36
MGI|MGI:107428	193	Gtl3 "gene trap locus 3" [Mus	0.879	0.414	0.837	5.7e-36
ZFIN|ZDB-GENE-040426-1784	192	zgc:73380 "zgc:73380" [Danio r	0.879	0.416	0.837	5.7e-36
UNIPROTKB|Q9Y6A4	193	C16orf80 "UPF0468 protein C16o	0.879	0.414	0.837	9.2e-36
FB|FBgn0032291	293	CG17118 [Drosophila melanogast	0.824	0.255	0.613	4.8e-23

TAIR|locus:2082184 BUG22 "AT3G12300" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 73/81 (90%), Positives = 79/81 (97%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             QAVTRVKPYICTMPL++D+GWNQIQLNLAD TRRAYGTNY ETLRVQ+HANCRLRRIYF+
Sbjct:   109 QAVTRVKPYICTMPLKMDEGWNQIQLNLADLTRRAYGTNYAETLRVQIHANCRLRRIYFA 168

Query:    70 DRLYSEEELPPEFKLYLPMQK 90
             DRLYSEEELPPEFKLYLP+QK
Sbjct:   169 DRLYSEEELPPEFKLYLPVQK 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

FB|FBgn0032248 CG5343 [Drosophila melanogaster (taxid:7227)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 68/81 (83%), Positives = 79/81 (97%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQK 90
             DRLYSE+ELPPEFKL+LP+QK
Sbjct:   169 DRLYSEDELPPEFKLFLPIQK 189

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0048666 "neuron development" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

UNIPROTKB|Q5ZHP3 RCJMB04_34o2 "UPF0468 protein C16orf80 homolog" [Gallus gallus (taxid:9031)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|Q6B857 Q6B857 "UPF0468 protein C16orf80 homolog" [Bos taurus (taxid:9913)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|E2R3J4 C16orf80 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|F2Z513 C16orf80 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

MGI|MGI:107428 Gtl3 "gene trap locus 3" [Mus musculus (taxid:10090)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IDA

ZFIN|ZDB-GENE-040426-1784 zgc:73380 "zgc:73380" [Danio rerio (taxid:7955)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q9Y6A4 C16orf80 "UPF0468 protein C16orf80" [Homo sapiens (taxid:9606)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 67/80 (83%), Positives = 76/80 (95%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ TRVKP+ICTMP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFS
Sbjct:   109 QSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query:    70 DRLYSEEELPPEFKLYLPMQ 89
             DRLYSE+ELP EFKLYLP+Q
Sbjct:   169 DRLYSEDELPAEFKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=TAS

FB|FBgn0032291 CG17118 [Drosophila melanogaster (taxid:7227)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 46/75 (61%), Positives = 62/75 (82%)

Query:    10 QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFS 69
             Q+ T VKP+   MP+ +  GWNQIQ NLADFTRRAYG+NY+ET+ +Q+HAN R+RRIYF+
Sbjct:   121 QSKTSVKPFCTAMPMGMSPGWNQIQFNLADFTRRAYGSNYLETVSLQLHANVRIRRIYFA 180

Query:    70 DRLYSEEELPPEFKL 84
             D+LY+E ELP +++L
Sbjct:   181 DKLYTEAELPNDYRL 195

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0048813 "dendrite morphogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q86D25	CP080_CAEEL	No assigned EC number	0.75	0.8791	0.3940	yes	no
Q6GL74	CP080_XENTR	No assigned EC number	0.8375	0.8791	0.4145	yes	no
Q8BTU1	CP080_MOUSE	No assigned EC number	0.8375	0.8791	0.4145	yes	no
Q6B857	CP080_BOVIN	No assigned EC number	0.8375	0.8791	0.4145	yes	no
Q9Y6A4	CP080_HUMAN	No assigned EC number	0.8375	0.8791	0.4145	yes	no
Q6PBJ2	CP080_DANRE	No assigned EC number	0.8375	0.8791	0.4166	yes	no
Q9VKV8	U0468_DROME	No assigned EC number	0.8395	0.8901	0.4070	yes	no
Q5ZHP3	CP080_CHICK	No assigned EC number	0.8375	0.8791	0.4145	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	91
pfam05018	190	pfam05018, DUF667, Protein of unknown function (DU	6e-49

>gnl|CDD|191163 pfam05018, DUF667, Protein of unknown function (DUF667)

 Score =  152 bits (386), Expect = 6e-49
 Identities = 63/82 (76%), Positives = 74/82 (90%)

Query: 8   TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIY 67
             Q+VTRVKP+ICTMPLRLD GWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+Y
Sbjct: 107 NYQSVTRVKPFICTMPLRLDPGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVY 166

Query: 68  FSDRLYSEEELPPEFKLYLPMQ 89
           F DRLY+E+ELPPE +LY P +
Sbjct: 167 FCDRLYTEDELPPELRLYCPKK 188

This family of proteins are highly conserved in eukaryotes. Some proteins in the family are annotated as transcription factors. However, there is currently no support for this in the literature. Length = 190

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG3213	238	consensus Transcription factor IIB [Transcription]	100.0
PF05018	190	DUF667: Protein of unknown function (DUF667); Inte	100.0

>KOG3213 consensus Transcription factor IIB [Transcription]

Probab=100.00  E-value=4.1e-38  Score=242.35  Aligned_cols=83  Identities=72%  Similarity=1.206  Sum_probs=81.1

Q ss_pred             ceeeeeeeeceeEeeccccCccchhhhhcHHHHHHHHhCcceeEEEEEEEecceeeEEeeeccccCCCcCCcccceeecc
Q 034565            8 TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLP   87 (91)
Q Consensus         8 ~fq~~trVkp~~c~mPL~L~~GWN~i~~nL~d~t~~aygT~yvet~rv~I~ANCRlRRIYFsDrlYs~~ELP~e~kl~~p   87 (91)
                      |||++++|+|++|+|||.|++||||||+||+|||+++||++|.||++||||||||||||||+|++|+++|+|.+||++.+
T Consensus       107 n~~ke~~~kp~~~~mPl~m~~~W~~iqlnL~dft~~~~~~~y~etl~iql~AncriRriyf~~kl~~~~e~~~~frlm~r  186 (238)
T KOG3213|consen  107 NFQKETSVKPFICTMPLVMDAGWNQIQLNLADFTRRAYGTNYGETLSIQLHANCRIRRIYFADKLYSEAELPLEFRLMLR  186 (238)
T ss_pred             ccchhhcccceEEecceEecCcceeEEeeHHHHHHHHhccceeeEEEEEEecceEEEEEEeccccCChhhCCCcceEccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccC
Q 034565           88 MQK   90 (91)
Q Consensus        88 ~~~   90 (91)
                      .++
T Consensus       187 f~~  189 (238)
T KOG3213|consen  187 FQV  189 (238)
T ss_pred             ccC
Confidence            764

>PF05018 DUF667: Protein of unknown function (DUF667); InterPro: IPR007714 This family of proteins are highly conserved in eukaryotes

Probab=100.00  E-value=1.2e-37  Score=230.51  Aligned_cols=83  Identities=70%  Similarity=1.273  Sum_probs=81.4

Q ss_pred             ceeeeeeeeceeEeeccccCccchhhhhcHHHHHHHHhCcceeEEEEEEEecceeeEEeeeccccCCCcCCcccceeecc
Q 034565            8 TIQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLP   87 (91)
Q Consensus         8 ~fq~~trVkp~~c~mPL~L~~GWN~i~~nL~d~t~~aygT~yvet~rv~I~ANCRlRRIYFsDrlYs~~ELP~e~kl~~p   87 (91)
                      |||+.++++|++|+|||.|++|||+|+|||+++|+++|||+|+||++|+||||||||||||||++|++||||+||||++|
T Consensus       107 n~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~~~~~~y~~~~~~sl~i~I~ancrlRrIyfsD~ly~~~elp~~~~l~~~  186 (190)
T PF05018_consen  107 NFQKETKVTPFHCQIPLRLSPGWNNLQIDLADLTRRAYGTNYFESLRIQICANCRLRRIYFSDRLYSEDELPPEFKLYLP  186 (190)
T ss_pred             eeeccccccccEEEcccccCCCcEEEEEEHHHHHHHHhccCceEEEEEEEecCEEEEEEEecCccCChhhCchhhEEccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q 034565           88 MQK   90 (91)
Q Consensus        88 ~~~   90 (91)
                      .+.
T Consensus       187 ~~~  189 (190)
T PF05018_consen  187 KQE  189 (190)
T ss_pred             cCC
Confidence            875

Some proteins in the family are annotated as transcription factors. However, there is currently no support for this in the literature.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00