Citrus Sinensis ID: 034948

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHcccccc
Coil and Loop (DISEMBL)
MGGGNGQKAKMAREKNLEKQKAankgsqletnKKAMSIQCKVCMQtfmcttsevkcrehaeakhpksdiyacfphlkk
Flexible Loop (DISEMBL)
mgggngqkakmAREKNLEkqkaankgsqletnkKAMSIQCKVCMQTFMCTTSEVKCREHaeakhpksdiyacfphlkk
Low Complexity Region (SEG)
MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK
Disordered region (IsUnstruct)
************************************SIQCKVCMQTFMCTTSEVKCRE*********DIYACF*****
Disordered Region (DISOPRED)
************************************SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLK*
Disordered Region (DISEMBL)
*******************************NKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK
Disordered Region (DISPRO)
*************************GSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLK*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
O64818	78	Uncharacterized protein A	yes	no	1.0	1.0	0.858	1e-33

>sp|O64818|Y2309_ARATH Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 71/78 (91%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPK+D+ ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
356496961	78	PREDICTED: uncharacterized protein At2g2	1.0	1.0	0.948	2e-36
356541669	78	PREDICTED: uncharacterized protein At2g2	1.0	1.0	0.935	3e-36
255625817	78	unknown [Glycine max]	1.0	1.0	0.923	1e-35
224067224	78	predicted protein [Populus trichocarpa]	1.0	1.0	0.910	4e-35
255584894	78	conserved hypothetical protein [Ricinus	0.987	0.987	0.935	7e-35
194466179	77	unknown [Arachis hypogaea]	0.974	0.987	0.935	4e-34
225458800	78	PREDICTED: uncharacterized protein At2g2	1.0	1.0	0.884	5e-34
224129906	78	predicted protein [Populus trichocarpa]	1.0	1.0	0.897	5e-34
3860323	78	hypothetical protein [Cicer arietinum]	1.0	1.0	0.897	7e-34
255538102	78	conserved hypothetical protein [Ricinus	1.0	1.0	0.884	8e-34

>gi|356496961|ref|XP_003517333.1| PREDICTED: uncharacterized protein At2g23090 [Glycine max]

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/78 (94%), Positives = 78/78 (100%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKNLEKQKAA+KGSQL++NKKAMSIQCKVCMQTFMCTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNLEKQKAASKGSQLDSNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+YACFPHLKK
Sbjct: 61 EAKHPKSDVYACFPHLKK 78

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541669|ref|XP_003539296.1| PREDICTED: uncharacterized protein At2g23090 [Glycine max]

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/78 (93%), Positives = 78/78 (100%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKN+EKQKAA+KGSQL++NKKAMSIQCKVCMQTFMCTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNIEKQKAASKGSQLDSNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+YACFPHLKK
Sbjct: 61 EAKHPKSDVYACFPHLKK 78

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255625817|gb|ACU13253.1| unknown [Glycine max]

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/78 (92%), Positives = 77/78 (98%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKN+EKQKAA+KGSQL++NKKAMSIQCKVCMQTFMCTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNIEKQKAASKGSQLDSNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPK D+YACFPHLKK
Sbjct: 61 EAKHPKPDVYACFPHLKK 78

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067224|ref|XP_002302417.1| predicted protein [Populus trichocarpa] gi|118482635|gb|ABK93237.1| unknown [Populus trichocarpa] gi|222844143|gb|EEE81690.1| predicted protein [Populus trichocarpa]

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/78 (91%), Positives = 76/78 (97%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMARE+NL+KQKA +KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMARERNLDKQKAGSKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+YACFPHLKK
Sbjct: 61 EAKHPKSDVYACFPHLKK 78

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584894|ref|XP_002533162.1| conserved hypothetical protein [Ricinus communis] gi|223527034|gb|EEF29221.1| conserved hypothetical protein [Ricinus communis]

 Score =  150 bits (380), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/77 (93%), Positives = 76/77 (98%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKNLEKQKAA KGSQLE+NKKAM+IQCKVCMQTFMCTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNLEKQKAAAKGSQLESNKKAMNIQCKVCMQTFMCTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLK 77
          EAKHPKS++YACFPHLK
Sbjct: 61 EAKHPKSELYACFPHLK 77

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194466179|gb|ACF74320.1| unknown [Arachis hypogaea]

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/77 (93%), Positives = 75/77 (97%), Gaps = 1/77 (1%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKNLEKQKAA KGSQL++NKKAMSIQCKVCMQTFMCTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNLEKQKAA-KGSQLDSNKKAMSIQCKVCMQTFMCTTSEVKCREHA 59

Query: 61 EAKHPKSDIYACFPHLK 77
          EAKHPKSD+Y CFPHLK
Sbjct: 60 EAKHPKSDVYVCFPHLK 76

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458800|ref|XP_002285206.1| PREDICTED: uncharacterized protein At2g23090 [Vitis vinifera] gi|147785069|emb|CAN62217.1| hypothetical protein VITISV_021844 [Vitis vinifera] gi|302142219|emb|CBI19422.3| unnamed protein product [Vitis vinifera]

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 75/78 (96%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQK+KMAREKN+EKQK A +GSQLE+NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNGQKSKMAREKNMEKQKNAARGSQLESNKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+Y CFPHLKK
Sbjct: 61 EAKHPKSDVYTCFPHLKK 78

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129906|ref|XP_002320700.1| predicted protein [Populus trichocarpa] gi|222861473|gb|EEE99015.1| predicted protein [Populus trichocarpa]

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/78 (89%), Positives = 75/78 (96%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMAREKNLEKQKA +KGSQLE+NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMAREKNLEKQKAGSKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+  CFPHL+K
Sbjct: 61 EAKHPKSDVNTCFPHLQK 78

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3860323|emb|CAA10129.1| hypothetical protein [Cicer arietinum]

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 70/78 (89%), Positives = 73/78 (93%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAKMARE+NLEKQK A KGSQLETNKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKMARERNLEKQKNAGKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD+  CFPHL K
Sbjct: 61 EAKHPKSDVLVCFPHLNK 78

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538102|ref|XP_002510116.1| conserved hypothetical protein [Ricinus communis] gi|223550817|gb|EEF52303.1| conserved hypothetical protein [Ricinus communis]

 Score =  147 bits (371), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 75/78 (96%)

Query: 1  MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
          MGGGNGQKAK ARE+N+EKQKAA KGSQLE+NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct: 1  MGGGNGQKAKTARERNMEKQKAAAKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EAKHPKSDIYACFPHLKK 78
          EAKHPKSD++ CFPHLKK
Sbjct: 61 EAKHPKSDLFVCFPHLKK 78

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
TAIR|locus:2045359	78	AT2G23090 "AT2G23090" [Arabido	1.0	1.0	0.858	2e-33
UNIPROTKB|G4MXI3	74	MGG_01222 "Uncharacterized pro	0.884	0.932	0.478	9.1e-13
ASPGD|ASPL0000068598	78	AN7617 [Emericella nidulans (t	0.884	0.884	0.478	5.8e-11
WB|WBGene00007223	73	C01F6.9 [Caenorhabditis elegan	0.807	0.863	0.352	0.00093

TAIR|locus:2045359 AT2G23090 "AT2G23090" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 67/78 (85%), Positives = 71/78 (91%)

Query:     1 MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHA 60
             MGGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHA
Sbjct:     1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query:    61 EAKHPKSDIYACFPHLKK 78
             EAKHPK+D+ ACFPHLKK
Sbjct:    61 EAKHPKADVVACFPHLKK 78

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4MXI3 MGG_01222 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 34/71 (47%), Positives = 48/71 (67%)

Query:     4 GNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAK 63
             GNG +A+  RE+N +  K+A K SQL+ N+ A +IQC++C  TF+ TT E +  +HAE K
Sbjct:     2 GNGNRAQQKRERNAKDAKSAPK-SQLKVNENAKNIQCEICKSTFLMTTREPQLLQHAENK 60

Query:    64 HPKSDIYACFP 74
             H K+ I  CFP
Sbjct:    61 HSKT-IADCFP 70

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000068598 AN7617 [Emericella nidulans (taxid:162425)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 34/71 (47%), Positives = 42/71 (59%)

Query:     4 GNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAK 63
             GNG KA   RE+N +  K+  K SQL+TN+ A  IQC VC  TF+ TT      EHA  K
Sbjct:     2 GNGAKAAFKRERNAKDTKSGGK-SQLKTNEAAKDIQCVVCRATFLKTTRGPALTEHAANK 60

Query:    64 HPKSDIYACFP 74
             H K+ +  CFP
Sbjct:    61 HNKT-LQDCFP 70

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

WB|WBGene00007223 C01F6.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query:     6 GQKAKMAREKNLEKQKAANKGS--QLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAK 63
             GQ+   +++KN +K  AA K    Q     KA++ +C VC+   M      K  +H E K
Sbjct:     4 GQQKIQSQQKNQKKADAARKAGIDQKAAAAKALNHKCTVCL-AMMPDPKTYK--QHFENK 60

Query:    64 HPKSDIYA 71
             HPKS + A
Sbjct:    61 HPKSPLPA 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.124   0.367    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       78        78   0.00091  102 3  11 23  0.40    29
                                                     29  0.38    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  510 (54 KB)
  Total size of DFA:  101 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.71u 0.19s 10.90t   Elapsed:  00:00:01
  Total cpu time:  10.71u 0.19s 10.90t   Elapsed:  00:00:01
  Start:  Fri May 10 03:53:06 2013   End:  Fri May 10 03:53:07 2013

GO:0008270 "zinc ion binding" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64818	Y2309_ARATH	No assigned EC number	0.8589	1.0	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_II1091 SubName- Full=Putative uncharacterized protein; (78 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	78
pfam12907	40	pfam12907, zf-met2, Zinc-binding	4e-18

>gnl|CDD|205139 pfam12907, zf-met2, Zinc-binding

 Score = 69.4 bits (170), Expect = 4e-18
 Identities = 28/40 (70%), Positives = 32/40 (80%)

Query: 37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHL 76
          +I CK+CMQTFMCTTSE    EHAE KHPK+D+ ACFP L
Sbjct: 1  NIICKICMQTFMCTTSEKLLTEHAENKHPKTDVEACFPGL 40

This is small family of metazoan zinc-binding proteins. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
PF12907	40	zf-met2: Zinc-binding	99.91
KOG4118	74	consensus Uncharacterized conserved protein [Funct	99.82
PF04419	38	4F5: 4F5 protein family; InterPro: IPR007513 Membe	98.09
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.69
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.39
KOG4488	70	consensus Small EDRK-rich protein H4F5 [General fu	94.87
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	94.19
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.52
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	93.5
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	90.74
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	90.21
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.22
smart00355	26	ZnF_C2H2 zinc finger.	88.92
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.36
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	85.46
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	83.87
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	80.98
PHA00616	44	hypothetical protein	80.84

>PF12907 zf-met2: Zinc-binding

Probab=99.91  E-value=1.3e-25  Score=128.05  Aligned_cols=40  Identities=58%  Similarity=1.007  Sum_probs=38.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHL   76 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CFP~~   76 (78)
                      +|+|+||||+||+|+++++|++|+||||||++|++|||+|
T Consensus         1 ~i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~CFP~l   40 (40)
T PF12907_consen    1 NIICKICRQTFMQTTNEPQLKEHAENKHPKNTFEECFPNL   40 (40)
T ss_pred             CcCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHcCCCC
Confidence            5899999999999999999999999999999999999986

>KOG4118 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.82  E-value=1.2e-20  Score=118.84  Aligned_cols=65  Identities=31%  Similarity=0.453  Sum_probs=58.3

Q ss_pred             CCCccHHHHHHHHHHHHHHHhh---hcccCcHHHHHhhccccchhhhhhhhccCChhHHHHHHHhcCCCCCcc
Q 034948            1 MGGGNGQKAKMAREKNLEKQKA---ANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIY   70 (78)
Q Consensus         1 Mg~GNg~ka~~~r~rn~kk~~k---~~~~SQlkan~~A~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~   70 (78)
                      |.||.+ | .++|+||++|+++   +.+++|+.++.+||+++|.||+.+   |+|+.++++||||||||++|.
T Consensus         1 MARGhQ-K-iqSQqknaeKqAkakk~~G~DQK~AA~~aL~~kCtVC~~~---mpdpktfkqhfe~kHpk~~~P   68 (74)
T KOG4118|consen    1 MARGHQ-K-IQSQQKNAEKQAKAKKKQGHDQKAAAMAALHHKCTVCMVQ---MPDPKTFKQHFENKHPKEPLP   68 (74)
T ss_pred             CcchHH-H-HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHhhhHhhHhh---CCCCchHHHHHhhcCCCCCCC
Confidence            777744 4 8999999999766   567899999999999999999999   999999999999999999864

>PF04419 4F5: 4F5 protein family; InterPro: IPR007513 Members of this family are short proteins that are rich in aspartate, glutamate, lysine and arginine

Probab=98.09  E-value=1.3e-07  Score=53.11  Aligned_cols=35  Identities=37%  Similarity=0.482  Sum_probs=17.5

Q ss_pred             CCCccHHHHHHHHHHHHHHHhh---hcccCcHHHHHhhcc
Q 034948            1 MGGGNGQKAKMAREKNLEKQKA---ANKGSQLETNKKAMS   37 (78)
Q Consensus         1 Mg~GNg~ka~~~r~rn~kk~~k---~~~~SQlkan~~A~~   37 (78)
                      |++||++  +++|+||++++++   +.++|||++++++|+
T Consensus         1 MtRGnQr--~~aRekn~Kk~~~~~~k~~~s~l~~~~~~l~   38 (38)
T PF04419_consen    1 MTRGNQR--EQAREKNQKKQAKQKKKGGKSGLKAAQRALN   38 (38)
T ss_dssp             ---SGGG--TTTSTTT---SS---SS-SS-SS----TT--
T ss_pred             CccHhHH--HHHHHHHHHHhhccccCCCccchhHHHHhcC
Confidence            8888886  8999999999963   567899999999875

Although the function of these proteins is unknown, they are found to be ubiquitously expressed [].; PDB: 1WVK_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.69  E-value=0.0051  Score=30.00  Aligned_cols=23  Identities=30%  Similarity=0.639  Sum_probs=20.2

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhc
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAK   63 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~K   63 (78)
                      +.|.||..+   ..++.+|.+|..++
T Consensus         1 ~~C~~C~~~---f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKS---FSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEE---ESSHHHHHHHHTTH
T ss_pred             CCCCCCCCC---cCCHHHHHHHHCcC
Confidence            469999999   67999999999876

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.39  E-value=0.0088  Score=27.93  Aligned_cols=24  Identities=29%  Similarity=0.663  Sum_probs=19.0

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      ++|++|..+   ..+...|..|....|
T Consensus         1 ~~C~~C~~~---~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKS---FRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-E---ESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCc---CCcHHHHHHHHHhhC
Confidence            479999999   568899999998876

...

>KOG4488 consensus Small EDRK-rich protein H4F5 [General function prediction only]

Probab=94.87  E-value=0.038  Score=34.90  Aligned_cols=20  Identities=45%  Similarity=0.722  Sum_probs=18.0

Q ss_pred             CCCccHHHHHHHHHHHHHHHhh
Q 034948            1 MGGGNGQKAKMAREKNLEKQKA   22 (78)
Q Consensus         1 Mg~GNg~ka~~~r~rn~kk~~k   22 (78)
                      |.+||++  .-+|++|++|.+.
T Consensus         1 MtRGNQR--dLaRqKN~KK~~d   20 (70)
T KOG4488|consen    1 MTRGNQR--DLARQKNMKKQQD   20 (70)
T ss_pred             CCcchHH--HHHHHHHHHHHHH
Confidence            8999998  8899999999874

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.19  E-value=0.022  Score=27.16  Aligned_cols=22  Identities=23%  Similarity=0.670  Sum_probs=19.2

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      ++|.+|..+|   .++..|..|...
T Consensus         1 y~C~~C~~~f---~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSF---SSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEE---SSHHHHHHHHHH
T ss_pred             CCCCCCCCcc---CCHHHHHHHHhH
Confidence            5799999995   588999999886

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.52  E-value=0.026  Score=27.40  Aligned_cols=24  Identities=25%  Similarity=0.636  Sum_probs=18.3

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|+.|--.   +. +..|.+|.+..||
T Consensus         1 y~C~~C~y~---t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYS---TS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-E---ES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCc---CC-HHHHHHHHHhhCc
Confidence            579999844   55 8899999999886

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=93.50  E-value=0.038  Score=27.26  Aligned_cols=25  Identities=32%  Similarity=0.561  Sum_probs=21.1

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|.+|..+|.   +...|.+|-...|+
T Consensus         2 ~~C~~C~~~F~---~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFS---SLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEES---SHHHHHHHHCTTTT
T ss_pred             CCCCccCCccC---ChhHHHHHhHHhcC
Confidence            68999999975   78899999976665

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.74  E-value=0.19  Score=30.35  Aligned_cols=27  Identities=26%  Similarity=0.480  Sum_probs=21.2

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+|+||..+   ......|+.|.|..|-+.
T Consensus        25 atCP~C~a~---~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   25 ATCPICGAV---IRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             EE-TTT--E---ESSHHHHHHHHHHHTTTS
T ss_pred             CCCCcchhh---ccchhhHHHHHHHHhccc
Confidence            589999999   778899999999999665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.21  E-value=0.15  Score=27.90  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=21.2

Q ss_pred             cccchhhhhhhhcc-CChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCT-TSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t-~~~~~L~~H~e~KHp   65 (78)
                      ..+|..|...|-.. ..-..|..|...+||
T Consensus        16 ~a~C~~C~~~~~~~~~~ts~l~~HL~~~hp   45 (45)
T PF02892_consen   16 KAKCKYCGKVIKYSSGGTSNLKRHLKKKHP   45 (45)
T ss_dssp             -EEETTTTEE-----SSTHHHHHHHHHTTH
T ss_pred             eEEeCCCCeEEeeCCCcHHHHHHhhhhhCc
Confidence            46899999998764 456899999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.22  E-value=0.31  Score=27.97  Aligned_cols=28  Identities=36%  Similarity=0.599  Sum_probs=22.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .+.|+.|...|    +...|.+|.+..|+.+.
T Consensus         2 ~f~CP~C~~~~----~~~~L~~H~~~~H~~~~   29 (54)
T PF05605_consen    2 SFTCPYCGKGF----SESSLVEHCEDEHRSES   29 (54)
T ss_pred             CcCCCCCCCcc----CHHHHHHHHHhHCcCCC
Confidence            47899999963    56789999999998653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=88.92  E-value=0.3  Score=22.45  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=19.5

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|.+|..+|   .....|..|.. .|.
T Consensus         1 ~~C~~C~~~f---~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVF---KSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchh---CCHHHHHHHHH-Hhc
Confidence            4799999995   57789999988 554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.36  E-value=0.26  Score=25.28  Aligned_cols=24  Identities=33%  Similarity=0.699  Sum_probs=20.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAK   63 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~K   63 (78)
                      .+.|.+|..+|-   +...|.+|..++
T Consensus         3 ~~~C~~C~~~~~---~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFT---DEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccC---CHHHHHHHHChH
Confidence            367999999963   888999999987

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=85.46  E-value=0.18  Score=25.14  Aligned_cols=23  Identities=26%  Similarity=0.545  Sum_probs=19.7

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhc
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAK   63 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~K   63 (78)
                      +.|.+|.-.   ..+...|.+|..+|
T Consensus         2 ~~C~~C~k~---f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKY---FSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBB---BSSHHHHHCCTTSH
T ss_pred             CCcccCCCC---cCCHHHHHHHHccC
Confidence            579999999   46889999998875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=83.87  E-value=0.89  Score=27.19  Aligned_cols=28  Identities=39%  Similarity=0.678  Sum_probs=22.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhc-CCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAK-HPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~K-HpK~   67 (78)
                      .+.|.+|...|   .+...|.+|..++ |.+.
T Consensus        50 ~~~C~~C~~~f---~s~~~l~~Hm~~~~H~~~   78 (100)
T PF12756_consen   50 SFRCPYCNKTF---RSREALQEHMRSKHHKKR   78 (100)
T ss_dssp             SEEBSSSS-EE---SSHHHHHHHHHHTTTTC-
T ss_pred             CCCCCccCCCC---cCHHHHHHHHcCccCCCc
Confidence            58999999995   4889999999987 5443

>smart00614 ZnF_BED BED zinc finger

Probab=80.98  E-value=1  Score=25.49  Aligned_cols=30  Identities=27%  Similarity=0.525  Sum_probs=24.7

Q ss_pred             cccchhhhhhhhcc--CChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCT--TSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t--~~~~~L~~H~e~KHpK   66 (78)
                      ..+|..|...+-..  ..-+.|..|..++||.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~~   49 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHPA   49 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCcC
Confidence            46899999997654  4568999999999986

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PHA00616 hypothetical protein

Probab=80.84  E-value=1.7  Score=25.02  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=23.7

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCCCCCc
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHPKSDI   69 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~   69 (78)
                      ++|.-|...|.   +.+.|..|..+.|--+++
T Consensus         2 YqC~~CG~~F~---~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          2 YQCLRCGGIFR---KKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CccchhhHHHh---hHHHHHHHHHHhcCCCcc
Confidence            68999999975   889999999877765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	78
1wvk_A	86	Nmr Solution Structure Of The Partially Disordered		4e-34

>pdb|1WVK|A Chain A, Nmr Solution Structure Of The Partially Disordered Protein At2g23090 From Arabidopsis Thaliana Length = 86

Iteration: 1
 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/77 (85%), Positives = 70/77 (90%)
Query: 2  GGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAE 61
          GGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAE
Sbjct: 10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAE 69
Query: 62 AKHPKSDIYACFPHLKK 78
          AKHPK+D+ ACFPHLKK
Sbjct: 70 AKHPKADVVACFPHLKK 86
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	78
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	5e-29

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1 Length = 86

 Score = 97.8 bits (243), Expect = 5e-29
 Identities = 66/77 (85%), Positives = 70/77 (90%)

Query: 2  GGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAE 61
          GGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAE
Sbjct: 10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAE 69

Query: 62 AKHPKSDIYACFPHLKK 78
          AKHPK+D+ ACFPHLKK
Sbjct: 70 AKHPKADVVACFPHLKK 86

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	100.0
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	98.12
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	97.95
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	92.49
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	92.48
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	92.18
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	91.8
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	91.79
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	91.6
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	91.6
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	91.58
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	91.57
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	91.54
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	91.37
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	91.12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	91.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	90.82
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	90.72
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	90.6
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	90.54
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	90.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	90.43
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	90.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	90.26
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	90.25
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	90.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	90.01
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	90.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	89.87
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.81
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	89.68
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	89.59
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	89.58
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	89.36
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	89.32
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	89.28
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	89.24
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	89.14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	89.11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	89.0
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	88.97
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	88.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	88.81
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	88.79
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	88.69
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	88.69
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	88.68
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	88.66
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	88.65
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	88.45
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	88.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	88.32
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	88.32
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	88.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	88.29
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	88.26
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	88.19
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	88.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	88.16
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	88.06
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	87.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	87.97
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	87.96
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.94
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	87.88
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	87.73
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	87.68
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	87.54
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	87.43
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	87.34
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	87.27
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	87.2
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	87.12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	87.01
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	87.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	86.96
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	86.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	86.95
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	86.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	86.89
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	86.86
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	86.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	86.84
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	86.81
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	86.78
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	86.77
1ard_A	29	Yeast transcription factor ADR1; transcription reg	86.73
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	86.64
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	86.59
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	86.59
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	86.57
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	86.56
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	86.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	86.44
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	86.48
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	86.34
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.25
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	86.19
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	86.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	85.96
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	85.95
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	85.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	85.87
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	86.0
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	85.76
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	85.69
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.68
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.62
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.38
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.31
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	85.13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	85.09
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	85.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	85.06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	84.82
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	84.77
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	84.75
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	84.71
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	84.47
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	84.47
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	84.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	84.28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	84.25
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	83.89
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	83.82
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	83.81
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	83.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	83.67
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	83.62
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	83.6
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	83.56
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.49
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	83.49
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	83.45
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	83.39
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	82.72
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	82.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	82.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	82.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.45
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	81.68
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	81.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	81.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	81.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	81.33
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	81.26
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	81.21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	80.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.87
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	80.77
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.69
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	80.69
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	80.66
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.17
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	80.03
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	80.02

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1

Probab=100.00  E-value=3.4e-41  Score=217.48  Aligned_cols=76  Identities=86%  Similarity=1.305  Sum_probs=72.3

Q ss_pred             CCccHHHHHHHHHHHHHHHhhhcccCcHHHHHhhccccchhhhhhhhccCChhHHHHHHHhcCCCCCccccCCCCC
Q 034948            2 GGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLK   77 (78)
Q Consensus         2 g~GNg~ka~~~r~rn~kk~~k~~~~SQlkan~~A~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CFP~~~   77 (78)
                      |||||+|++++|+||+++++++.++|||++|++||+|+|+|||++||+|+++++|++||||||||++|++|||+|+
T Consensus        10 ~~~Ng~ka~qareRNakk~~~~~kkSQlkan~~A~~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~~~~eCFP~~~   85 (86)
T 1wvk_A           10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLK   85 (86)
T ss_dssp             SCCCSGGGTTTSTTTCCCSSSSCSSCSSCCCCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGGTTSGGGC
T ss_pred             CCccHHHHHHHHHHHHHhcccccchhhHHHHHHhhCCCChHhHhhHHhcCChHHHHHHHHcCCCCCCHHHHCcCCC
Confidence            7999999999999999988744567999999999999999999999999999999999999999999999999986

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=98.12  E-value=6.8e-07  Score=46.75  Aligned_cols=23  Identities=13%  Similarity=0.218  Sum_probs=21.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +++|+||+++   ++|.++|++|||.
T Consensus         3 k~~CpvCk~q---~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            3 DFCCPKCQYQ---APDMDTLQIHVME   25 (28)
T ss_dssp             CEECTTSSCE---ESSHHHHHHHHHH
T ss_pred             cccCcccccc---CcChHHHHHHHHH
Confidence            5899999999   9999999999983

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=97.95  E-value=2.4e-06  Score=46.32  Aligned_cols=28  Identities=29%  Similarity=0.426  Sum_probs=24.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .++|++|+..   ..++..|..|||++|+-.
T Consensus         5 GFiCP~C~~~---l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKS---LGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCE---ESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHH---cCCHHHHHHHHHhccccC
Confidence            3899999999   679999999999999743

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=92.49  E-value=0.049  Score=32.91  Aligned_cols=28  Identities=32%  Similarity=0.555  Sum_probs=18.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|..+|.   ....|..|.+..||.+
T Consensus        56 ~~~C~~C~k~F~---~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           56 VFPCKYCPATFY---SSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SEECTTSSCEES---SHHHHHHHHHTTCTTC
T ss_pred             ccCCCCCCCEeC---CHHHHHHhCcccCcCC
Confidence            366777777753   5566777777777654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.48  E-value=0.12  Score=25.39  Aligned_cols=32  Identities=19%  Similarity=0.355  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        10 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   41 (42)
T 2yte_A           10 PYSCAECKETFS---DNNRLVQHQKM-HTVKSGPSS   41 (42)
T ss_dssp             SCBCTTTCCBCS---SHHHHHHHHHH-TSCCSSCCC
T ss_pred             CeECCCCCCccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999886 654433344

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.18  E-value=0.085  Score=26.16  Aligned_cols=32  Identities=16%  Similarity=0.342  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eof_A           12 PYECNECQKAFN---TKSNLMVHQRT-HTGESGPSS   43 (44)
T ss_dssp             SEECTTTCCEES---CHHHHHHHHHH-TTTSSCSCC
T ss_pred             CeECCCCCcccC---CHhHHHHHHHH-hCCCCCCCC
Confidence            489999999974   77899999876 654433344

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.80  E-value=0.075  Score=26.71  Aligned_cols=32  Identities=16%  Similarity=0.262  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2epw_A           12 PCKCTECGKAFC---WKSQLIMHQRT-HVDDKHSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SSHHHHHHHHH-CCSCCCSCC
T ss_pred             CeeCCCCCCccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   67899999876 655444344

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.79  E-value=0.11  Score=26.24  Aligned_cols=33  Identities=18%  Similarity=0.376  Sum_probs=24.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2enh_A           12 PYECDVCRKAFS---HHASLTQHQRV-HSGEKPSGPS   44 (46)
T ss_dssp             SCBCTTTCCBCS---SSHHHHHHGGG-SCCSCCCCCC
T ss_pred             CcCCCCcCchhC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999974   67889999875 6544444664

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.60  E-value=0.094  Score=26.42  Aligned_cols=32  Identities=16%  Similarity=0.268  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eq0_A           12 PYKCHECGKVFR---RNSHLARHQLI-HTGEKPSGP   43 (46)
T ss_dssp             CEECTTTCCEES---SHHHHHHHHTT-TCCCCCSCC
T ss_pred             CeECCCCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78899999765 655443344

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.60  E-value=0.075  Score=26.81  Aligned_cols=32  Identities=16%  Similarity=0.313  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emi_A           12 HYECSECGKAFI---QKSTLSMHQRI-HRGEKPSGP   43 (46)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHGG-GCSCCCCSC
T ss_pred             CCCCCCCCcccC---CHHHHHHHHhH-hCCCCCCCC
Confidence            489999999974   77899999875 554434455

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.58  E-value=0.097  Score=26.36  Aligned_cols=32  Identities=16%  Similarity=0.303  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ysp_A           12 PYKCEKCGKGYN---SKFNLDMHQKV-HTGERPSGP   43 (46)
T ss_dssp             SEEETTTTEEES---CHHHHHHHHTT-SCSCCSSCC
T ss_pred             CeECCCCCCccC---CHHHHHHHHHh-hCCCCCCCC
Confidence            489999999974   77899999876 654433344

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.57  E-value=0.12  Score=25.97  Aligned_cols=33  Identities=15%  Similarity=0.237  Sum_probs=25.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|....|..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A           12 PYECIECGKAFI---QNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             SBCCSSSCCCBS---SHHHHHHHHTTTTTTSCSSSC
T ss_pred             CEECCccCchhC---ChHHHHHHhHhhcCCCCCCCC
Confidence            489999999964   788999999866765544444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.54  E-value=0.062  Score=27.12  Aligned_cols=32  Identities=22%  Similarity=0.480  Sum_probs=24.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2em3_A           12 PYECKVCSKAFT---QKAHLAQHQKT-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-HCCCCCCCS
T ss_pred             CeECCCCCcccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   78899999976 544434455

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.37  E-value=0.077  Score=26.84  Aligned_cols=32  Identities=19%  Similarity=0.470  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eoz_A           12 PYSCNVCGKAFV---LSAHLNQHLRV-HTQETLSGP   43 (46)
T ss_dssp             SEEETTTTEEES---SHHHHHHHHHH-HSSCCSSSC
T ss_pred             CeECcccChhhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   78899999876 544434455

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=91.12  E-value=0.11  Score=27.40  Aligned_cols=28  Identities=25%  Similarity=0.455  Sum_probs=19.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|   .....|..|....|+.+
T Consensus        30 ~~~C~~C~~~f---~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           30 PYPCGLCNRAF---TRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             SEECTTTCCEE---SSHHHHHHHHTTTSCCS
T ss_pred             CccCCCCCCcc---CCHHHHHHHHHHHcCCc
Confidence            36788888775   36677888877777654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.10  E-value=0.11  Score=28.97  Aligned_cols=28  Identities=18%  Similarity=0.361  Sum_probs=18.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|   .....|..|....|+..
T Consensus        45 ~~~C~~C~~~f---~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           45 KFHCPHCDTVI---ARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             SEECSSSSCEE---SSHHHHHHHHHHTSCCS
T ss_pred             ccCCCCCCCcc---CCHHHHHHHHHHhCCCC
Confidence            36677777774   35666777777777654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.82  E-value=0.12  Score=26.24  Aligned_cols=33  Identities=15%  Similarity=0.252  Sum_probs=24.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .++|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eom_A           12 GHRCSDCGKFFL---QASNFIQHRRI-HTGEKPSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCS---SHHHHHHHHHH-HSSCCCSSCC
T ss_pred             CcCCCCCCCeeC---ChHHHHHHHHH-hCCCCCCCCC
Confidence            489999999974   77899999875 5444444553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.72  E-value=0.12  Score=25.96  Aligned_cols=32  Identities=16%  Similarity=0.338  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytf_A           12 PFECSECQKAFN---TKSNLIVHQRT-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHT-SCSSSSSCC
T ss_pred             CcCCCCCCcccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78899999875 554434455

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=90.60  E-value=0.15  Score=26.89  Aligned_cols=33  Identities=18%  Similarity=0.391  Sum_probs=25.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|....|..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~~H~~~k~~~C   44 (54)
T 2eps_A           12 PYICQSCGKGF---SRPDHLNGHIKQVHTSERPHKC   44 (54)
T ss_dssp             CEECSSSCCEE---SSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CeECCCCCccc---CCHHHHHHHHHHhcCCCCCccC
Confidence            48999999996   4778999999867765544344

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=90.54  E-value=0.14  Score=22.68  Aligned_cols=27  Identities=26%  Similarity=0.495  Sum_probs=21.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|....|..
T Consensus         2 ~~~C~~C~k~f~---~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSA---DSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCS---CSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccC---CHHHHHHHHHHHccC
Confidence            378999999964   668899998876643

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=90.48  E-value=0.12  Score=24.18  Aligned_cols=25  Identities=28%  Similarity=0.761  Sum_probs=20.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      .+.|.+|...|.   ....|..|...-+
T Consensus         7 ~~~C~~C~k~f~---~~~~L~~H~~~h~   31 (35)
T 2elx_A            7 GYVCALCLKKFV---SSIRLRSHIREVH   31 (35)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHHTS
T ss_pred             CeECCCCcchhC---CHHHHHHHHHHHc
Confidence            489999999974   6789999987543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=90.44  E-value=0.11  Score=28.95  Aligned_cols=28  Identities=21%  Similarity=0.485  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|....|...
T Consensus        15 ~~~C~~C~k~f~---~~~~L~~H~~~~h~~~   42 (77)
T 2ct1_A           15 PYECYICHARFT---QSGTMKMHILQKHTEN   42 (77)
T ss_dssp             SEECTTTCCEES---CHHHHHHHHHHHSSSS
T ss_pred             CeECCCcCchhC---CHHHHHHHHHHhcCCC
Confidence            589999999974   7789999999888753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.43  E-value=0.13  Score=25.81  Aligned_cols=26  Identities=15%  Similarity=0.329  Sum_probs=20.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .+.|.+|...|.   ....|..|...-+.
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~H~~   37 (44)
T 2epv_A           12 PYECNECGKAFI---WKSLLIVHERTHAG   37 (44)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHGGGSS
T ss_pred             CeECCCCCcccC---chHHHHHHHhHhcC
Confidence            489999999974   77899999876333

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.28  E-value=0.22  Score=24.90  Aligned_cols=32  Identities=16%  Similarity=0.286  Sum_probs=24.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eop_A           12 PHECRECGKSFS---FNSQLIVHQRI-HTGENPSGP   43 (46)
T ss_dssp             SCBCTTTCCBCS---SHHHHHHHHTT-TTTSCCSCC
T ss_pred             CeeCCCCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78999999876 655443344

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.26  E-value=0.14  Score=25.71  Aligned_cols=32  Identities=19%  Similarity=0.500  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2enc_A           12 PFKCEECGKGFY---TNSQCYSHQRS-HSGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-SCCSSCCSS
T ss_pred             CcCCCCCCCcCC---ChHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999875 654433344

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.25  E-value=0.13  Score=25.74  Aligned_cols=32  Identities=19%  Similarity=0.287  Sum_probs=23.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (44)
T 2eou_A           12 TSECQECGKIFR---HSSLLIEHQAL-HAGESGPSS   43 (44)
T ss_dssp             CCCCTTTCCCCS---SHHHHHHHHHH-HTTSCCCCC
T ss_pred             CeECCCCCcccC---CHHHHHHHHHH-HCCCCCCCC
Confidence            489999999975   67889999876 543333344

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.01  E-value=0.23  Score=24.45  Aligned_cols=32  Identities=19%  Similarity=0.258  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2en7_A           12 PYVCNECGKAFR---SKSYLIIHTRT-HTGESGPSS   43 (44)
T ss_dssp             SSCCTTTCCCCS---SHHHHHHHHTT-TCCSSSSCC
T ss_pred             CeECCCCCCccC---CHHHHHHHhhh-cCCCCCCCC
Confidence            489999999964   78899999864 655444344

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=90.01  E-value=0.19  Score=22.45  Aligned_cols=28  Identities=21%  Similarity=0.426  Sum_probs=21.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|....|..+
T Consensus         2 ~~~C~~C~k~f~---~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFT---RRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCS---SSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccC---ChHHHHHHHHHHccCC
Confidence            378999999974   6688999976667643

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.01  E-value=0.31  Score=24.25  Aligned_cols=32  Identities=19%  Similarity=0.283  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eq4_A           12 LYNCKECGKSF---SRAPCLLKHERL-HSGEKPSGP   43 (46)
T ss_dssp             CCCBTTTTBCC---SCHHHHHHHHHH-CCSSSCCCC
T ss_pred             CeECCCCCCcc---CchHHHHHHHHh-cCCCCCCCC
Confidence            48999999996   478899999875 654433344

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.87  E-value=0.068  Score=27.05  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eoo_A           12 PYGCNECGKNFG---RHSHLIEHLKR-HFREKSSGP   43 (46)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHHH-HHSTTSSCC
T ss_pred             CEEccccCcccC---CHHHHHHHHHH-HcCCCCCCC
Confidence            489999999974   77899999876 543333344

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.81  E-value=0.13  Score=25.83  Aligned_cols=33  Identities=18%  Similarity=0.309  Sum_probs=24.0

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      ..+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        11 ~~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ep0_A           11 KPYKCDVCHKSFR---YGSSLTVHQRI-HTGEKPSGP   43 (46)
T ss_dssp             CSEECSSSCCEES---SHHHHHHHHTT-TSSSCCCSC
T ss_pred             CCeeCcccCcccC---ChHHHHHHHHH-hCCCCCCCC
Confidence            3489999999974   77899999764 654433344

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.68  E-value=0.11  Score=26.09  Aligned_cols=32  Identities=16%  Similarity=0.287  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2em7_A           12 PYKCEECGKGFI---CRRDLYTHHMV-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---CHHHHHHHGGG-GTTCCCSST
T ss_pred             CccCCCccchhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999765 654433344

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.59  E-value=0.27  Score=24.59  Aligned_cols=33  Identities=15%  Similarity=0.219  Sum_probs=24.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2emg_A           12 PFICSECGKVFT---HKTNLIIHQKI-HTGERPSGPS   44 (46)
T ss_dssp             SCBCTTTCCBCS---SHHHHHHHHTT-TSCCCCSCSC
T ss_pred             CEECCccCcccC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999964   78899999875 6544444553

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.58  E-value=0.24  Score=24.91  Aligned_cols=32  Identities=19%  Similarity=0.241  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytq_A           12 PYGCSECGKAFS---SKSYLIIHMRT-HSGEKPSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---CHHHHHHHHTT-TCCSCSSCC
T ss_pred             CcCCCccChhhC---ChHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78999999875 655433344

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.36  E-value=0.21  Score=24.94  Aligned_cols=32  Identities=16%  Similarity=0.369  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ep1_A           12 PYECSDCGKSFI---KKSQLHVHQRI-HTGENPSGP   43 (46)
T ss_dssp             SSCCSSSCCCCS---SHHHHHHHHGG-GSSSCCCSS
T ss_pred             CcCCCCCCchhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78899999886 544434455

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.32  E-value=0.25  Score=24.42  Aligned_cols=32  Identities=16%  Similarity=0.281  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eoj_A           12 PYECCECGKVFS---RKDQLVSHQKT-HSGQSGPSS   43 (44)
T ss_dssp             SCEETTTTEECS---SHHHHHHHHTT-SSSSCSCCC
T ss_pred             CeeCCCCCCccC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999775 654433344

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.28  E-value=0.28  Score=24.57  Aligned_cols=32  Identities=16%  Similarity=0.431  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eoq_A           12 PFKCDICGKSFC---GRSRLNRHSMV-HTAEKPSGP   43 (46)
T ss_dssp             SCCCSSSCCCCS---SHHHHHHHHHH-TTCCCSSSC
T ss_pred             CcCCCcCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78899999875 654433344

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.24  E-value=0.15  Score=25.61  Aligned_cols=32  Identities=28%  Similarity=0.335  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yso_A           12 SHQCRECGEIFF---QYVSLIEHQVL-HMGQKNSGP   43 (46)
T ss_dssp             CEECTTTCCEES---SHHHHHHHHHH-HSCCSCCCT
T ss_pred             CEEccccChhhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   77899999876 543333344

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=89.14  E-value=0.17  Score=26.29  Aligned_cols=28  Identities=14%  Similarity=0.337  Sum_probs=22.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|....|..+
T Consensus         7 p~~C~~C~k~F~---~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            7 PYACDICGKRYK---NRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CEECTTTCCEES---SHHHHHHHHHHSSCC-
T ss_pred             CEECCCcCcccC---CHHHHHHHhhhhcCCC
Confidence            489999999974   7789999998568654

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=89.11  E-value=0.13  Score=25.81  Aligned_cols=32  Identities=19%  Similarity=0.263  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2em9_A           12 PYNCKECGKSFR---WASCLLKHQRV-HSGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHGGG-GTSCCCCST
T ss_pred             CeECCccccccC---ChHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   77899999765 654433344

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.05  E-value=0.28  Score=24.62  Aligned_cols=33  Identities=21%  Similarity=0.352  Sum_probs=24.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|.
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eoh_A           12 PYECKECRKTFI---QIGHLNQHKRV-HTGERSSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCS---SHHHHHHHHHH-CSSCCSCSTT
T ss_pred             CcCCCCcCchhC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999974   77899999875 6544444553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.00  E-value=0.16  Score=25.59  Aligned_cols=32  Identities=19%  Similarity=0.390  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC-CCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK-SDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK-~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.. ...-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~~C   44 (46)
T 2eoy_A           12 CFKCNKCEKTFS---CSKYLTQHERI-HTRGVKSGPS   44 (46)
T ss_dssp             CEECSSSCCEES---SSHHHHHHHTT-CCSCCTTSSS
T ss_pred             CEECcCCCCcCC---CHHHHHHHHHH-cCCCCCCCCC
Confidence            489999999974   67899999864 654 433344

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=88.97  E-value=0.24  Score=28.16  Aligned_cols=27  Identities=19%  Similarity=0.390  Sum_probs=15.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|   .+...|..|....|+.
T Consensus        65 ~~~C~~C~~~f---~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           65 PYICQSCGKGF---SRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SBCCSSSCCCB---SSHHHHHHHHHHTSCC
T ss_pred             ceECCCccchh---CCHHHHHHHHHHhcCC
Confidence            35666666664   3555666666656654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.82  E-value=0.24  Score=24.87  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2en9_A           12 LFKCNECKKTFT---QSSSLTVHQRI-HTGEKPSGP   43 (46)
T ss_dssp             CCBCTTTCCBCS---SHHHHHHHHHH-HTSSCCCSC
T ss_pred             CEECCccCcccC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78899999876 544433345

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.81  E-value=0.22  Score=24.35  Aligned_cols=32  Identities=19%  Similarity=0.299  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        10 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   41 (41)
T 2ept_A           10 VYECQECGKSFR---QKGSLTLHERI-HTGSGPSSG   41 (41)
T ss_dssp             CEECSSSCCEES---SHHHHHHHGGG-CCCCSCSCC
T ss_pred             CeECCCCCCCcC---CHHHHHHHHHH-hCCCCCcCC
Confidence            488999999974   77899999764 654433333

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.79  E-value=0.069  Score=26.96  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2en3_A           12 PFQCKECGMNFS---WSCSLFKHLRS-HERTDPSGPS   44 (46)
T ss_dssp             SEECSSSCCEES---SSHHHHHHHHH-HHHSCCSSCS
T ss_pred             CeeCcccChhhC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999975   66889999865 5433344564

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=88.69  E-value=0.29  Score=23.67  Aligned_cols=26  Identities=27%  Similarity=0.528  Sum_probs=20.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|... |..
T Consensus         6 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~   31 (39)
T 1njq_A            6 SYTCSFCKREFR---SAQALGGHMNV-HRR   31 (39)
T ss_dssp             SEECTTTCCEES---SHHHHHHHHHT-TCC
T ss_pred             ceECCCCCcccC---CHHHHHHHHHH-cCC
Confidence            478999999974   77899999875 543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.69  E-value=0.23  Score=24.87  Aligned_cols=32  Identities=16%  Similarity=0.280  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ene_A           12 PYKCNECGKVFR---HNSYLSRHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHTT-TCCCCCCSC
T ss_pred             CeECCCCCchhC---ChHHHHHHHhh-cCCCCCCCC
Confidence            489999999964   77899999875 655443344

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=88.68  E-value=0.32  Score=25.19  Aligned_cols=22  Identities=14%  Similarity=0.309  Sum_probs=10.4

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|   .+...|..|...
T Consensus         2 ~~C~~C~~~f---~~~~~l~~H~~~   23 (57)
T 1bbo_A            2 YICEECGIRX---KKPSMLKKHIRT   23 (57)
T ss_dssp             CBCTTTCCBC---SSHHHHHHHHHH
T ss_pred             CcCCCCcCcC---CCHHHHHHHHHh
Confidence            3455555553   244445555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.66  E-value=0.43  Score=26.41  Aligned_cols=31  Identities=19%  Similarity=0.472  Sum_probs=25.9

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcCCCCCc
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDI   69 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~   69 (78)
                      ..+.|.+|...|   .....|..|....|+....
T Consensus        37 ~~~~C~~C~k~f---~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A           37 LRFPCEFCGKRF---EKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCEECTTTCCEE---SSHHHHHHHHHHTSTTTSS
T ss_pred             cccCCCCCCchh---CCHHHHHHHHHHhCCCCCC
Confidence            458999999996   4778999999999987754

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.65  E-value=0.29  Score=24.54  Aligned_cols=33  Identities=15%  Similarity=0.240  Sum_probs=25.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|.
T Consensus        12 ~~~C~~C~k~F---~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2ytp_A           12 HYECSECGKAF---ARKSTLIMHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEE---SSHHHHHHHHTT-TSCCCCCSSC
T ss_pred             CeECCcCCccc---CCHHHHHHHHHH-hCCCCCCCCC
Confidence            48999999996   478999999875 6555445664

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=88.45  E-value=0.32  Score=25.51  Aligned_cols=28  Identities=21%  Similarity=0.551  Sum_probs=21.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|   .....|..|...-+...
T Consensus         2 ~~~C~~C~~~f---~~~~~l~~H~~~h~~~~   29 (60)
T 2adr_A            2 SFVCEVCTRAF---ARQEHLKRHYRSHTNEK   29 (60)
T ss_dssp             CBCCTTTCCCB---SCHHHHHHHHHTTTSSC
T ss_pred             cCcCCCCcccc---CCHHHHHHHHHHhCCCC
Confidence            37899999996   47789999998744333

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.33  E-value=0.45  Score=23.62  Aligned_cols=33  Identities=15%  Similarity=0.257  Sum_probs=24.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|-
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq3_A           12 PYECNQCGKAFS---VRSSLTTHQAI-HTGKKPSGPS   44 (46)
T ss_dssp             SSEETTTTEECS---SHHHHHHHHTT-SCCCCCCCSC
T ss_pred             CeECCCCChhhC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999974   77899999875 6554444564

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.32  E-value=0.36  Score=24.03  Aligned_cols=32  Identities=19%  Similarity=0.334  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ytr_A           12 PYKCNECGKAFS---QTSKLARHQRI-HTGEKPSGP   43 (46)
T ss_dssp             TTCCTTTCCCCS---SHHHHHHHHTT-TTTCSCCCS
T ss_pred             CcCCCCCCCccC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999775 654433344

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.32  E-value=0.23  Score=24.91  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2en6_A           12 PYGCNECGKTF---SQKSILSAHQRT-HTGEKPSGP   43 (46)
T ss_dssp             CEEETTTTEEE---SSHHHHHHHHHH-HSSCCCSSS
T ss_pred             CeECCCCCccc---CchHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   477899999886 544333344

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=88.29  E-value=0.24  Score=26.56  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=19.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      .+.|.+|...|.   ....|..|....|
T Consensus        10 ~~~C~~C~k~f~---~~~~l~~H~~~~H   34 (66)
T 2drp_A           10 TYRCKVCSRVYT---HISNFCRHYVTSH   34 (66)
T ss_dssp             EEECTTTCCEES---SHHHHHHHHHHHS
T ss_pred             ceECCCCcchhC---CHHHHHHHHHHHc
Confidence            477888888864   6778888888767

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=88.29  E-value=0.22  Score=24.96  Aligned_cols=32  Identities=19%  Similarity=0.337  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F---~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2em0_A           12 TWKCRECDMCF---SQASSLRLHQNV-HVGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCCCC---SSHHHHHHHGGG-GSSSSCSCS
T ss_pred             CeECCCCCccc---CCHHHHHHHHHH-cCCCCCcCC
Confidence            48999999996   478899999876 654433344

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=88.26  E-value=0.15  Score=30.96  Aligned_cols=31  Identities=26%  Similarity=0.597  Sum_probs=25.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .++|.+|...+-..-+=+.|..|.+.+||.+
T Consensus        29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e   59 (73)
T 2ct5_A           29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEE   59 (73)
T ss_dssp             CCEETTTTEECCCCSSTHHHHHHHHHSCHHH
T ss_pred             EEECCCCCccccCCCChHhHHHHHHHHCHHH
Confidence            4689999999654555688999999999965

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.19  E-value=0.22  Score=24.83  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eow_A           12 PYKCNECGKAFR---ARSSLAIHQAT-HSGEKPSGP   43 (46)
T ss_dssp             CEECTTSCCEES---SHHHHHHHHHH-HCCCSCSCT
T ss_pred             CeeccccCChhc---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999875 544434455

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=88.18  E-value=0.26  Score=24.12  Aligned_cols=32  Identities=16%  Similarity=0.295  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        10 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   41 (42)
T 2el5_A           10 PYECSECGKAFN---RKDQLISHQRT-HAGESGPSS   41 (42)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHGG-GCCCCSCCC
T ss_pred             CccCCCcChhhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999876 544433344

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.16  E-value=0.24  Score=24.99  Aligned_cols=32  Identities=19%  Similarity=0.351  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eon_A           12 PYKCQVCGKAFR---VSSHLVQHHSV-HSGERPSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---SHHHHHHHTTT-TTSCCSCTT
T ss_pred             ccCCCCCCcccC---cHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999864 655444455

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.06  E-value=0.29  Score=24.25  Aligned_cols=32  Identities=16%  Similarity=0.354  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2yu5_A           12 PFKCSKCDRVFT---QRNYLVQHERT-HARKSGPSS   43 (44)
T ss_dssp             SEECSSSSCEES---SSHHHHHHHHH-CCCCCSSCC
T ss_pred             CeECCCCCchhC---CHHHHHHHhHh-cCCCCCCCC
Confidence            489999999974   66889999886 544333334

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=87.84  E-value=0.096  Score=23.12  Aligned_cols=22  Identities=18%  Similarity=0.469  Sum_probs=17.5

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|.   ....|..|...
T Consensus         3 ~~C~~C~k~f~---~~~~l~~H~~~   24 (26)
T 2lvu_A            3 YVCERCGKRFV---QSSQLANHIRH   24 (26)
Confidence            78999999975   56778888653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.04  E-value=0.19  Score=24.31  Aligned_cols=27  Identities=19%  Similarity=0.349  Sum_probs=21.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|....|..
T Consensus         9 ~~~C~~C~k~f~---~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            9 LYYCSQCHYSSI---TKNCLKRHVIQKHSN   35 (37)
T ss_dssp             EEECSSSSCEEE---CHHHHHHHHHHHTCC
T ss_pred             CeECCCCCcccC---CHHHHHHHHHHHccC
Confidence            489999999974   778899995556754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.97  E-value=0.21  Score=25.14  Aligned_cols=32  Identities=16%  Similarity=0.298  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yto_A           12 PYKCSDCGKAFT---RKSGLHIHQQS-HTGERHSGP   43 (46)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHHH-HTCCCBTTT
T ss_pred             CEECcccCCccC---CHhHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999876 544434455

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.96  E-value=0.4  Score=23.93  Aligned_cols=32  Identities=16%  Similarity=0.329  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2epz_A           12 PFDCIDCGKAFS---DHIGLNQHRRI-HTGEKPSGP   43 (46)
T ss_dssp             SBCCTTTCCCBS---SHHHHHHHHTT-TTTCCCCSS
T ss_pred             CeECCCCCceeC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999874 654443344

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.94  E-value=0.34  Score=22.92  Aligned_cols=25  Identities=28%  Similarity=0.647  Sum_probs=20.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      .+.|.+|...|.   ....|..|...-+
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~h~   33 (37)
T 2elo_A            9 SYSCPVCEKSFS---EDRLIKSHIKTNH   33 (37)
T ss_dssp             CCEETTTTEECS---SHHHHHHHHHHHC
T ss_pred             CcCCCCCCCccC---CHHHHHHHHHHHc
Confidence            489999999964   7789999987644

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.88  E-value=0.2  Score=25.09  Aligned_cols=32  Identities=16%  Similarity=0.350  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emy_A           12 PYECHECGKAF---SRKYQLISHQRT-HAGEKPSGP   43 (46)
T ss_dssp             CEECSSSCCEE---SSHHHHHHHHHH-HTTSCCSCS
T ss_pred             CcCCCCCCccc---CcHHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   478899999876 544333344

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.73  E-value=0.38  Score=23.91  Aligned_cols=32  Identities=19%  Similarity=0.344  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F---~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eoe_A           12 PYKCNECGKVF---TQNSHLANHQRI-HTGVKPSGP   43 (46)
T ss_dssp             SSEETTTTEEC---SSHHHHHHHHGG-GSCCCSCSS
T ss_pred             CeECCCcChhh---CCHHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   478899999875 554433344

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.68  E-value=0.28  Score=24.65  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2em5_A           12 SHQCHECGRGFT---LKSHLNQHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHTT-TSCSCCSSC
T ss_pred             CeECCcCCCccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999865 655433344

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=87.54  E-value=0.25  Score=24.82  Aligned_cols=32  Identities=16%  Similarity=0.255  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ely_A           12 PFKCVECGKGFS---RRSALNVHHKL-HTGEKPSGP   43 (46)
T ss_dssp             SBCCSSSCCCBS---STTHHHHHHHH-HSCCSSCSC
T ss_pred             CcccCccCcccC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999974   66889999886 544433344

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.43  E-value=0.25  Score=24.09  Aligned_cols=28  Identities=21%  Similarity=0.392  Sum_probs=21.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .+.|.+|...|.   ....|..|... |..+.
T Consensus        11 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~   38 (42)
T 2ytb_A           11 PYRCDQCGKAFS---QKGSLIVHIRV-HTGSG   38 (42)
T ss_dssp             SBCCTTTTCCBS---SHHHHHTTGGG-TSCCS
T ss_pred             CeeCCCccchhC---CHHHHHHHHHH-hCCCC
Confidence            489999999964   77899999864 65443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=87.34  E-value=0.37  Score=23.44  Aligned_cols=27  Identities=19%  Similarity=0.346  Sum_probs=21.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|... |..+
T Consensus        11 ~~~C~~C~k~f~---~~~~l~~H~~~-H~~~   37 (42)
T 2epc_A           11 PYLCGQCGKSFT---QRGSLAVHQRS-CSQS   37 (42)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHHH-TTCC
T ss_pred             CeECCCCCcccC---CHHHHHHHhhh-cCCC
Confidence            489999999974   77899999875 5444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.27  E-value=0.37  Score=24.03  Aligned_cols=32  Identities=16%  Similarity=0.323  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (45)
T 2epu_A           12 PFECTHCGKSFR---AKGNLVTHQRI-HTGEKSGPS   43 (45)
T ss_dssp             SEEETTTTEEES---SHHHHHHHHTT-TSSCCCCCS
T ss_pred             CccCCCCCCccC---ChHHHHHHHHH-hCCCCCCCC
Confidence            489999999974   77899999765 655444455

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.20  E-value=0.36  Score=24.09  Aligned_cols=32  Identities=22%  Similarity=0.328  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytj_A           12 PYICAECGKAF---TIRSNLIKHQKI-HTKQKPSGP   43 (46)
T ss_dssp             SEECSSSCCEE---SSHHHHHHHHHH-TSCCCCSSC
T ss_pred             CeECCCCChhh---CCHHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   478999999875 654433344

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=87.12  E-value=0.53  Score=27.57  Aligned_cols=29  Identities=28%  Similarity=0.570  Sum_probs=21.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .+.|.+|...|   .....|..|....|..+.
T Consensus        69 ~~~C~~C~~~f---~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           69 KLTCLECMRTF---KSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             GGEEGGGTEEC---SSHHHHHHHHHHTSCCCC
T ss_pred             CccCccccchh---CCHHHHHHHHHHHcCCCC
Confidence            37788888875   366778888877776654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.01  E-value=0.31  Score=24.43  Aligned_cols=32  Identities=22%  Similarity=0.403  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yth_A           12 PFQCEECGKRF---TQNSHLHSHQRV-HTGEKPSGP   43 (46)
T ss_dssp             SBCCSSSCCCB---SSHHHHHHHGGG-GTTCCCSSC
T ss_pred             CCCCCCCCccc---CCHHHHHHHHHh-cCCCCCCCC
Confidence            48999999996   478899999765 654444455

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=87.00  E-value=0.33  Score=24.36  Aligned_cols=32  Identities=19%  Similarity=0.348  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emk_A           12 PYECKECGKAFS---QTTHLIQHQRV-HTGEKPSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---CHHHHHHHHHH-HSSCCCSSC
T ss_pred             ceECCCCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78999999876 544433344

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.96  E-value=0.31  Score=24.37  Aligned_cols=32  Identities=16%  Similarity=0.368  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2en1_A           12 PFKCEECGKRFT---QNSQLHSHQRV-HTGEKPSGP   43 (46)
T ss_dssp             SEEETTTTEEES---SHHHHHHHGGG-GSCCCCSCC
T ss_pred             CeeCCCCCcccC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78899999875 544433344

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.95  E-value=0.28  Score=24.71  Aligned_cols=32  Identities=19%  Similarity=0.410  Sum_probs=23.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ytm_A           12 PYKCMECGKAFG---DNSSCTQHQRL-HTGQRPSGP   43 (46)
T ss_dssp             SSSBTTTTBCCS---SHHHHHHHHHH-HHSCCCCCC
T ss_pred             CcCCCCCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999876 533333344

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.95  E-value=0.31  Score=24.37  Aligned_cols=32  Identities=22%  Similarity=0.355  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eq2_A           12 PYQCNECGKAFS---QTSKLARHQRV-HTGEKPSGP   43 (46)
T ss_dssp             SSSCCSSCCCCS---SHHHHHHHGGG-GCCCCCCCC
T ss_pred             CeECCCCCcccC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   78899999865 655444455

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=86.94  E-value=0.25  Score=24.80  Aligned_cols=32  Identities=16%  Similarity=0.310  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emj_A           12 PFECAECGKSFS---ISSQLATHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSSCEES---SHHHHHHHHHH-HTTSCSSSS
T ss_pred             CEECCCCCcccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78899999876 544434455

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.89  E-value=0.45  Score=23.71  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|.. .|..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2enf_A           12 PYKCNECGKVFT---QNSHLVRHRG-IHTGEKPSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---SHHHHHHHHT-TTTTSSCCCC
T ss_pred             CeECCCCCcccC---CHHHHHHHHH-hhCCCCCCCC
Confidence            489999999964   7789999976 4655544455

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=86.86  E-value=0.3  Score=24.34  Aligned_cols=32  Identities=19%  Similarity=0.320  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2el4_A           12 PYGCSQCAKTF---SLKSQLIVHQRS-HTGVKPSGP   43 (46)
T ss_dssp             SEECSSSSCEE---SSHHHHHHHGGG-SSSCCCSCC
T ss_pred             ceECCCCCchh---CCHHHHHHHHHH-hCCCCCCCC
Confidence            48999999996   478999999865 654433344

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.85  E-value=0.33  Score=24.28  Aligned_cols=32  Identities=16%  Similarity=0.289  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ep3_A           12 PYRCAECGKAFT---DRSNLFTHQKI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHTT-TTTSCCCCT
T ss_pred             CeECCCCCchhC---CHHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999875 654433344

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.84  E-value=0.7  Score=22.96  Aligned_cols=33  Identities=15%  Similarity=0.258  Sum_probs=24.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq1_A           12 PYKCNECGKAFR---AHSNLTTHQVI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTTTCCCS---SHHHHHHHHTT-TCCSCCSSCC
T ss_pred             CeECCcCChhhC---CHHHHHHHHHH-hCCCCCCCCC
Confidence            489999999964   78899999874 6554444563

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.81  E-value=0.27  Score=28.95  Aligned_cols=29  Identities=24%  Similarity=0.523  Sum_probs=22.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .+.|.+|...|.   ....|..|....|...+
T Consensus        54 ~~~C~~C~k~F~---~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           54 ALKCQHCRKQFK---SKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             HHSCSSSCCCCS---CHHHHHHHHHHHSCSCS
T ss_pred             CEECCCCCCccC---CHHHHHHHHHHHcCCCC
Confidence            488999998864   67889999888775443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.78  E-value=0.26  Score=24.58  Aligned_cols=32  Identities=16%  Similarity=0.318  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emm_A           12 PHKCNECGKSF---IQSAHLIQHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEE---SSHHHHHHHHHH-HSCCCTTSS
T ss_pred             CeeCCCCChhh---CCHHHHHHHHHH-hCCCCCCCC
Confidence            48999999996   477899999876 544433344

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=86.77  E-value=0.34  Score=24.28  Aligned_cols=32  Identities=16%  Similarity=0.425  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2el6_A           12 PYKCSQCEKSF---SGKLRLLVHQRM-HTREKPSGP   43 (46)
T ss_dssp             SEECSSSSCEE---SSHHHHHHHHGG-GCCSSCCSC
T ss_pred             CeECCCCCccc---CCHHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   477899999775 544433344

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=86.73  E-value=0.49  Score=20.72  Aligned_cols=23  Identities=26%  Similarity=0.641  Sum_probs=19.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         2 ~~~C~~C~~~f~---~~~~l~~H~~~   24 (29)
T 1ard_A            2 SFVCEVCTRAFA---RQEHLKRHYRS   24 (29)
T ss_dssp             CCBCTTTCCBCS---SHHHHHHHHHH
T ss_pred             CeECCCCCcccC---CHHHHHHHHHH
Confidence            378999999964   77889999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.64  E-value=0.18  Score=25.30  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=23.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emh_A           12 PYICTVCGKAFT---DRSNLIKHQKI-HTGEKPSGP   43 (46)
T ss_dssp             SEECTTTCCEES---SHHHHHHHHHH-HHCSSCSSS
T ss_pred             CcCCCCCCchhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999875 543333344

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.59  E-value=0.46  Score=23.78  Aligned_cols=32  Identities=19%  Similarity=0.359  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|.. .|..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em6_A           12 CYKCDVCGKEFS---QSSHLQTHQR-VHTGEKPSGP   43 (46)
T ss_dssp             CCBCSSSCCBCS---SHHHHHHHHT-TTSSSCCCCT
T ss_pred             CeECCCCCcccC---CHHHHHHHHH-HcCCCCCCCC
Confidence            489999999964   7789999976 4655444455

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.59  E-value=0.33  Score=24.23  Aligned_cols=32  Identities=19%  Similarity=0.329  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eml_A           12 PYECSVCGKAFS---HRQSLSVHQRI-HSGKKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHGG-GSSCCCSCS
T ss_pred             CeeCCCcCCccC---CHHHHHHHHHH-hcCCCCCCC
Confidence            489999999964   77899999875 544333344

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.57  E-value=0.27  Score=24.38  Aligned_cols=32  Identities=19%  Similarity=0.376  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        10 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~~~~~C   41 (44)
T 2emx_A           10 PFGCSCCEKAF---SSKSYLLVHQQT-HAEEKPSGP   41 (44)
T ss_dssp             CEECSSSSCEE---SSHHHHHHHHHH-HTSSCSCSC
T ss_pred             CccCCCCCccc---CCHHHHHHHHHH-hCCCCCCCC
Confidence            48999999996   477899999876 544333344

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.56  E-value=0.35  Score=24.07  Aligned_cols=33  Identities=15%  Similarity=0.300  Sum_probs=24.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCccccC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACF   73 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CF   73 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|-
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yrj_A           12 PYRCGECGKAFA---QKANLTQHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHTT-TSSCCSSCSC
T ss_pred             CeECCCCCCccC---CHHHHHHHHHH-cCCCCCCCCC
Confidence            489999999964   78899999864 6555444563

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=86.53  E-value=0.27  Score=24.60  Aligned_cols=32  Identities=16%  Similarity=0.336  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ema_A           12 RYKCNECGKVFS---RNSQLSQHQKI-HTGEKPSGP   43 (46)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHTG-GGCCCCCSS
T ss_pred             CcCCCCCcchhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   78899999876 544433344

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=86.44  E-value=0.27  Score=29.52  Aligned_cols=35  Identities=26%  Similarity=0.426  Sum_probs=25.7

Q ss_pred             hhccccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           34 KAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        34 ~A~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+..++|.+|...|.   ....|..|...-|...+| .|
T Consensus        25 ~~~~h~C~~Cgk~F~---~~~~L~~H~~~H~~~k~~-~C   59 (85)
T 2lv2_A           25 SAECHLCPVCGESFA---SKGAQERHLRLLHAAQVF-PC   59 (85)
T ss_dssp             CCTTEECTTSCCEES---SHHHHHHHHHTTSCSSSE-EC
T ss_pred             CCCCEECCCCCCCcC---cHHHHhhhhhhccCCCcc-CC
Confidence            344589999999974   778999999865544433 44

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=86.48  E-value=0.13  Score=23.02  Aligned_cols=22  Identities=23%  Similarity=0.474  Sum_probs=17.6

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|.   ....|..|...
T Consensus         3 ~~C~~C~k~f~---~~~~l~~H~~~   24 (29)
T 2lvt_A            3 CQCVMCGKAFT---QASSLIAHVRQ   24 (29)
Confidence            78999999975   55678888753

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=86.34  E-value=0.36  Score=22.84  Aligned_cols=23  Identities=22%  Similarity=0.407  Sum_probs=19.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus        11 ~~~C~~C~k~f~---~~~~l~~H~~~   33 (37)
T 1p7a_A           11 PFQCPDCDRSFS---RSDHLALHRKR   33 (37)
T ss_dssp             SBCCTTTCCCBS---SHHHHHHHHGG
T ss_pred             CccCCCCCcccC---cHHHHHHHHHH
Confidence            489999999974   67899999764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.25  E-value=0.32  Score=22.95  Aligned_cols=25  Identities=20%  Similarity=0.497  Sum_probs=20.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .+.|.+|...|.   ....|..|... |.
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~-H~   33 (36)
T 2elq_A            9 PFKCSLCEYATR---SKSNLKAHMNR-HS   33 (36)
T ss_dssp             SEECSSSSCEES---CHHHHHHHHHH-SS
T ss_pred             CccCCCCCchhC---CHHHHHHHHHH-hc
Confidence            489999999974   77899999864 54

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.19  E-value=0.37  Score=23.59  Aligned_cols=27  Identities=22%  Similarity=0.458  Sum_probs=21.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|... |..+
T Consensus        11 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~   37 (42)
T 2eos_A           11 PYPCEICGTRFR---HLQTLKSHLRI-HTGS   37 (42)
T ss_dssp             CBCCSSSCCCBS---SHHHHHHHTTT-TSCC
T ss_pred             CEECCCCCCccC---CHHHHHHHHHh-cCCC
Confidence            489999999964   77899999774 5444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=86.08  E-value=0.43  Score=23.75  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=21.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|   .....|..|...-+..
T Consensus        10 ~~~C~~C~k~f---~~~~~l~~H~~~H~~~   36 (45)
T 2epq_A           10 PYSCPVCGLRF---KRKDRMSYHVRSHDGS   36 (45)
T ss_dssp             SSEETTTTEEC---SCHHHHHHHHHHHSCC
T ss_pred             CCcCCCCCccc---CCHHHHHHHHHHccCC
Confidence            48999999997   4788999998874443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.96  E-value=0.39  Score=23.86  Aligned_cols=32  Identities=16%  Similarity=0.261  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        10 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   41 (43)
T 2yrm_A           10 AFFCNECDCRFS---EEASLKRHTLQ-THSDKSGPS   41 (43)
T ss_dssp             CBCCSSSCCCBS---SHHHHHHHHHH-HTCTTCSSS
T ss_pred             CEECCCCCCeeC---ChHHHHHHHHh-hCCCCCccC
Confidence            489999999964   77899999876 443333344

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=85.95  E-value=0.17  Score=28.57  Aligned_cols=20  Identities=20%  Similarity=0.484  Sum_probs=9.1

Q ss_pred             ccchhhhhhhhccCChhHHHHHH
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHA   60 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~   60 (78)
                      ++|.+|...|.   ....|..|.
T Consensus        33 ~~C~~C~k~F~---~~~~L~~H~   52 (60)
T 4gzn_C           33 RSCPECGKCFR---DQSEVNRHL   52 (60)
T ss_dssp             EECTTTCCEES---SHHHHHHHG
T ss_pred             eECCCCCCCcC---CHHHHHHHh
Confidence            44555555432   344444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.94  E-value=0.68  Score=23.02  Aligned_cols=32  Identities=16%  Similarity=0.302  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytn_A           12 PYKCNECGKVFT---QNSHLARHRGI-HTGEKPSGP   43 (46)
T ss_dssp             SCBCTTTCCBCS---SHHHHHHHGGG-TSCCCCCSC
T ss_pred             CeECCCCCCeeC---CHHHHHHHhhh-cCCCCCCCC
Confidence            489999999964   77899999764 655443344

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.87  E-value=0.32  Score=24.38  Aligned_cols=32  Identities=19%  Similarity=0.387  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2em2_A           12 PFKCKECGKAFR---QNIHLASHLRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-HCCCCSSCS
T ss_pred             CEECCcCCchhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77899999876 544333345

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=86.00  E-value=0.15  Score=22.77  Aligned_cols=23  Identities=17%  Similarity=0.382  Sum_probs=18.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   +...|..|...
T Consensus         3 ~~~C~~C~k~f~---~~~~l~~H~~~   25 (30)
T 2lvr_A            3 PYVCIHCQRQFA---DPGALQRHVRI   25 (30)
Confidence            378999999975   56778888764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=85.76  E-value=0.33  Score=26.42  Aligned_cols=25  Identities=16%  Similarity=0.319  Sum_probs=11.8

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|.+|...|.   ....|..|....|.
T Consensus        38 ~~C~~C~~~f~---~~~~L~~H~~~h~~   62 (70)
T 1x5w_A           38 FKCNYCSFDTK---QPSNLSKHMKKFHG   62 (70)
T ss_dssp             EECSSSSCEES---SHHHHHHHHHHHHS
T ss_pred             EeCCCCCCccC---CHHHHHHHHHHHhC
Confidence            44555555532   34445555544443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=85.69  E-value=0.37  Score=21.07  Aligned_cols=22  Identities=23%  Similarity=0.619  Sum_probs=18.2

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|   .....|..|...
T Consensus         3 ~~C~~C~k~f---~~~~~l~~H~~~   24 (29)
T 2m0f_A            3 LKCRECGKQF---TTSGNLKRHLRI   24 (29)
T ss_dssp             EECTTTSCEE---SCHHHHHHHHHH
T ss_pred             ccCCCCCCcc---CChhHHHHHHHH
Confidence            6899999996   477889999864

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.68  E-value=0.47  Score=23.64  Aligned_cols=32  Identities=16%  Similarity=0.395  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ep2_A           12 PYECSICGKSFT---KKSQLHVHQQI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHT-TSSCCSCCS
T ss_pred             CcCCCCCCcccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78999999874 654433344

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.62  E-value=0.39  Score=24.04  Aligned_cols=32  Identities=16%  Similarity=0.313  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emf_A           12 HFECTECGKAFT---RKSTLSMHQKI-HTGEKPSGP   43 (46)
T ss_dssp             CEECSSSCCEES---CHHHHHHHGGG-TSCSSCSCC
T ss_pred             CeECCCCCchhC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   78899999875 654433344

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.38  E-value=0.55  Score=23.29  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eov_A           12 PYKCSDCGKSFT---WKSRLRIHQKC-HTGERHSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---SHHHHHHHHHH-HSCCSSCCS
T ss_pred             CccCCccChhhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999865 544433344

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.31  E-value=0.48  Score=23.52  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|.. .|..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~-~H~~~~p~~C   43 (46)
T 2yts_A           12 PYICNECGKSF---IQKSHLNRHRR-IHTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEE---SSHHHHHHHGG-GTSSCCSSCC
T ss_pred             CEECCCCChhh---CChHHHHHHHH-hcCCCCCcCC
Confidence            48999999996   47889999976 4655544455

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=85.13  E-value=0.38  Score=20.92  Aligned_cols=24  Identities=21%  Similarity=0.618  Sum_probs=19.1

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|.+|...|.   ....|..|... |.
T Consensus         2 ~~C~~C~k~f~---~~~~l~~H~~~-h~   25 (27)
T 1znf_A            2 YKCGLCERSFV---EKSALSRHQRV-HK   25 (27)
T ss_dssp             CBCSSSCCBCS---SHHHHHHHGGG-TC
T ss_pred             ccCCCCCCcCC---CHHHHHHHHHH-cC
Confidence            68999999964   67889999764 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.09  E-value=0.28  Score=24.46  Aligned_cols=32  Identities=19%  Similarity=0.432  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~kp~~C   43 (46)
T 2eor_A           12 PYNCEECGKAFI---HDSQLQEHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECTTTCCEES---SHHHHHHHHHH-HHSCCCSSS
T ss_pred             CccCCCCCCCcC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999974   77899999876 533333355

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=85.06  E-value=0.42  Score=30.37  Aligned_cols=29  Identities=21%  Similarity=0.400  Sum_probs=24.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .++|.+|...|   .....|..|...-|...+
T Consensus        78 ~~~C~~C~k~F---~~~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           78 RYQCLACGKSF---INYQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             CEEESSSCCEE---SSHHHHHHHHHHHTCCCT
T ss_pred             cccCCCCCCCc---CCHHHHHHHhHHhcCCCC
Confidence            48899999996   477899999999887654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.06  E-value=0.45  Score=23.51  Aligned_cols=32  Identities=19%  Similarity=0.324  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2emb_A           12 RYECSKCQATFN---LRKHLIQHQKT-HAAKSGPSS   43 (44)
T ss_dssp             SEECTTTCCEES---CHHHHHHHGGG-GCCCCCTTC
T ss_pred             CeECCCCCCccC---CHHHHHHHHHH-cCCCCCcCC
Confidence            489999999974   77899999875 544433344

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.82  E-value=0.36  Score=24.21  Aligned_cols=32  Identities=16%  Similarity=0.262  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2em4_A           12 PYECIECGKAFK---TKSSLICHRRS-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-HSSSSCCCC
T ss_pred             CcCCCCCCCccC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999964   77899999875 544434455

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.77  E-value=0.61  Score=26.44  Aligned_cols=28  Identities=25%  Similarity=0.300  Sum_probs=18.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|   .....|..|....|...
T Consensus        25 ~~~C~~C~k~f---~~~~~L~~H~~~~H~~~   52 (95)
T 2ej4_A           25 SRPKKSCDRTF---STMHELVTHVTMEHVGG   52 (95)
T ss_dssp             SSSCCCCCCCC---SSHHHHHHHHHHTTTCC
T ss_pred             CCccccccccc---CCHHHHHHHHHHhccCC
Confidence            35677777775   36677777777666544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=84.75  E-value=0.61  Score=21.92  Aligned_cols=26  Identities=23%  Similarity=0.464  Sum_probs=20.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|... |..
T Consensus         2 p~~C~~C~k~F~---~~~~L~~H~~~-H~~   27 (33)
T 1rim_A            2 KFACPECPKRFM---RSDHLSKHITL-HEL   27 (33)
T ss_dssp             CCCCSSSCCCCS---SHHHHHHHHHH-HTT
T ss_pred             cccCCCCCchhC---CHHHHHHHHHH-hCC
Confidence            378999999974   77899999875 543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.71  E-value=0.62  Score=23.17  Aligned_cols=32  Identities=16%  Similarity=0.302  Sum_probs=23.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yti_A           12 PYKCNECGKVFT---QNSHLARHRGI-HTGEKPSGP   43 (46)
T ss_dssp             TTCCSSSCCCCS---SHHHHHHHHTT-TSCSCCSST
T ss_pred             CeECCCCCcccC---ChhHHHHHhHh-cCCCCCCCC
Confidence            489999999964   77899999764 655444455

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=84.47  E-value=0.55  Score=23.84  Aligned_cols=32  Identities=19%  Similarity=0.503  Sum_probs=23.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (48)
T 2epr_A           12 QVACEICGKIF---RDVYHLNRHKLS-HSGEKPYSS   43 (48)
T ss_dssp             SEEETTTTEEE---SSHHHHHHHGGG-SCSCCCCCS
T ss_pred             CeeCCCCCccc---CCHHHHHHHHHh-cCCCCCccC
Confidence            48999999996   478899999875 544333344

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=84.47  E-value=0.44  Score=28.02  Aligned_cols=26  Identities=27%  Similarity=0.530  Sum_probs=12.3

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      +.|.+|...|.   ....|..|....|+.
T Consensus        95 ~~C~~C~~~f~---~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           95 YKCSSCSQQFM---QKKDLQSHMIKLHSG  120 (124)
T ss_dssp             EECSSSCCEES---SHHHHHHHHHHTSSC
T ss_pred             ccCCCccchhC---CHHHHHHHHHHHCCC
Confidence            44555555532   344455555544543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.39  E-value=0.67  Score=22.94  Aligned_cols=32  Identities=22%  Similarity=0.262  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2en8_A           12 SHTCDECGKNF---CYISALRIHQRV-HMGEKCSGP   43 (46)
T ss_dssp             SEECTTTCCEE---SSHHHHHHHHTT-TCCSCSSCC
T ss_pred             CeECCCcCccc---CCHHHHHHHHHH-hCCCCCCCC
Confidence            48999999996   477899999864 655433344

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.28  E-value=0.42  Score=23.85  Aligned_cols=32  Identities=19%  Similarity=0.320  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ytd_A           12 PYKCSECGKAFH---RHTHLNEHRRI-HTGYRPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-HTCCCSSCS
T ss_pred             CeECCCCCCeeC---ChHHHHHHHHH-cCCCCCCCC
Confidence            489999999964   77899999775 544433344

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=84.25  E-value=0.4  Score=25.58  Aligned_cols=27  Identities=22%  Similarity=0.486  Sum_probs=22.5

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      ..+.|.+|...|   .....|..|....|.
T Consensus        39 ~~~~C~~C~k~f---~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           39 KVYPCPFCFKEF---TRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CCEECTTTCCEE---SCHHHHHHHHHHHTC
T ss_pred             cCeECCCCCCcc---CCHHHHHHHHHHHcC
Confidence            348999999996   478899999988773

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.89  E-value=0.29  Score=24.54  Aligned_cols=32  Identities=13%  Similarity=0.296  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2em8_A           12 PYKCVECGKGYK---RRLDLDFHQRV-HTGEKLSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHHH-HHCCCCCCS
T ss_pred             CeECcccCchhC---CHHHHHHHHHH-HcCCCCCCC
Confidence            489999999974   77899999886 543333334

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=83.82  E-value=0.74  Score=20.08  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=20.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .+.|.+|...|   .....|..|... |.
T Consensus         3 ~~~C~~C~~~f---~~~~~l~~H~~~-h~   27 (30)
T 2m0d_A            3 PYQCDYCGRSF---SDPTSKMRHLET-HD   27 (30)
T ss_dssp             CEECTTTCCEE---SCHHHHHHHHHT-TC
T ss_pred             CccCCCCCccc---CCHHHHHHHHHH-hc
Confidence            37899999996   477889999874 53

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=83.81  E-value=0.41  Score=21.06  Aligned_cols=23  Identities=17%  Similarity=0.337  Sum_probs=18.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         3 ~~~C~~C~k~f~---~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSR---DFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEES---SHHHHHHHHHH
T ss_pred             CccCCCcChhhC---CHHHHHHHHHH
Confidence            378999999964   77899999764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=83.71  E-value=0.63  Score=25.72  Aligned_cols=29  Identities=24%  Similarity=0.399  Sum_probs=20.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .++|.+|...|   .....|..|....|...+
T Consensus        47 ~~~C~~C~~~f---~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A           47 AFVCSKCGKTF---TRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             CEECSSSCCEE---SCHHHHHHHHHHCCCCCS
T ss_pred             ceECCCCCChh---CCHHHHHHHHHHccCCCC
Confidence            47788888885   366778888876665443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.67  E-value=0.36  Score=23.90  Aligned_cols=27  Identities=22%  Similarity=0.426  Sum_probs=21.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|...-+..
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~H~~~   38 (44)
T 2eox_A           12 SYNCNECGKAFT---RIFHLTRHQKIHTRK   38 (44)
T ss_dssp             CEEETTTTEEES---SSHHHHTTHHHHCCC
T ss_pred             CeECcccCcccC---CHHHHHHHHHHhCCC
Confidence            489999999964   678899998864433

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=83.62  E-value=0.42  Score=21.04  Aligned_cols=23  Identities=22%  Similarity=0.466  Sum_probs=18.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         3 ~~~C~~C~k~f~---~~~~l~~H~~~   25 (28)
T 2kvf_A            3 PYSCSVCGKRFS---LKHQMETHYRV   25 (28)
T ss_dssp             SEECSSSCCEES---CHHHHHHHHTT
T ss_pred             CccCCCCCcccC---CHHHHHHHHHh
Confidence            378999999964   67899999764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=83.60  E-value=0.32  Score=26.48  Aligned_cols=30  Identities=17%  Similarity=0.288  Sum_probs=23.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDI   69 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~   69 (78)
                      .+.|.+|...|.   ....|..|...-+...+|
T Consensus         9 ~~~C~~C~k~f~---~~~~L~~H~~~H~~~~~~   38 (70)
T 1x5w_A            9 PEKCSECSYSCS---SKAALRIHERIHCTDRPF   38 (70)
T ss_dssp             SEECSSSSCEES---SHHHHHHHHGGGCCSCSE
T ss_pred             CeECCCCCcccC---CHHHHHHHHHHcCCCCCE
Confidence            489999999964   778999999875455455

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.56  E-value=0.67  Score=22.94  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=23.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eme_A           12 PYVCDYCGKAFG---LSAELVRHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEES---SHHHHHHHHGG-GCCCSCCSS
T ss_pred             CeECCCCChhhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999974   77899999875 544333344

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.49  E-value=0.31  Score=23.17  Aligned_cols=23  Identities=26%  Similarity=0.499  Sum_probs=18.6

Q ss_pred             cccchhhhhhhhccCCh-hHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSE-VKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~-~~L~~H~e~   62 (78)
                      .+.|.+|...|.   .. ..|..|...
T Consensus         9 ~~~C~~C~k~f~---~~~~~L~~H~~~   32 (37)
T 2elp_A            9 AMKCPYCDFYFM---KNGSDLQRHIWA   32 (37)
T ss_dssp             CEECSSSSCEEC---SSCHHHHHHHHH
T ss_pred             CeECCCCChhhc---cCHHHHHHHHHh
Confidence            489999999975   55 789999764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=83.49  E-value=0.68  Score=27.65  Aligned_cols=28  Identities=21%  Similarity=0.328  Sum_probs=16.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|.   ....|..|....|...
T Consensus        62 ~~~C~~Cgk~F~---~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           62 MFTCHHCGKQLR---SLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCCCSSSCCCCS---SHHHHHHHHHHHTCCC
T ss_pred             CeECCCCCCeeC---CHHHHHHHhHHhcCCC
Confidence            356666666643   4566666644456544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.45  E-value=0.44  Score=23.74  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=23.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2ytk_A           12 PYKCNECGKVF---TQNSHLTNHWRI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEE---SSHHHHHHHHHH-HSSSSCSSC
T ss_pred             CEeCCcCCCcc---CCHHHHHHHHHH-HCCCCCCCC
Confidence            48999999996   477899999875 544433344

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=83.39  E-value=0.65  Score=21.55  Aligned_cols=23  Identities=22%  Similarity=0.865  Sum_probs=19.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         7 ~~~C~~C~k~f~---~~~~l~~H~~~   29 (35)
T 1srk_A            7 PFVCRICLSAFT---TKANCARHLKV   29 (35)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHGG
T ss_pred             CeeCCCCCcccC---CHHHHHHHHHH
Confidence            488999999964   67899999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.72  E-value=0.8  Score=26.95  Aligned_cols=29  Identities=17%  Similarity=0.268  Sum_probs=23.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSD   68 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~   68 (78)
                      .+.|.+|...|.   ....|..|....|+...
T Consensus        80 ~~~C~~C~k~f~---~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           80 VLKCMYCGHSFE---SLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             SCBCSSSCCBCS---SHHHHHHHHHHTTTTTC
T ss_pred             ceECCCCCCccC---CHHHHHHHHHHhCCccc
Confidence            478999999964   77899999998887654

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.69  E-value=0.37  Score=24.08  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|   .....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emp_A           12 PYMCNECGKAF---SVYSSLTTHQVI-HTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEE---SCHHHHHHHHHH-HHCCSCCSC
T ss_pred             CeECCCCCchh---CCHHHHHHHHHH-cCCCCCCCC
Confidence            48999999996   477899999875 543333344

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=82.59  E-value=0.45  Score=24.56  Aligned_cols=25  Identities=24%  Similarity=0.495  Sum_probs=18.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      .+.|.+|...|   .....|..|....|
T Consensus        32 ~~~C~~C~~~f---~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           32 PYKCEFCEYAA---AQKTSLRYHLERHH   56 (57)
T ss_dssp             CEECSSSSCEE---SSHHHHHHHHHHHC
T ss_pred             CcCCCCCcchh---CCHHHHHHHHHHhc
Confidence            47888888885   46778888887655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=82.51  E-value=0.54  Score=20.87  Aligned_cols=23  Identities=17%  Similarity=0.372  Sum_probs=18.7

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         3 ~~~C~~C~k~f~---~~~~l~~H~~~   25 (27)
T 2kvg_A            3 PYRCPLCRAGCP---SLASMQAHMRG   25 (27)
T ss_dssp             TEEETTTTEEES---CHHHHHHHHTT
T ss_pred             CcCCCCCCcccC---CHHHHHHHHHh
Confidence            378999999974   67889999753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.45  E-value=0.74  Score=21.40  Aligned_cols=23  Identities=22%  Similarity=0.431  Sum_probs=19.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~   31 (36)
T 2elr_A            9 THLCDMCGKKFK---SKGTLKSHKLL   31 (36)
T ss_dssp             SCBCTTTCCBCS---SHHHHHHHHHH
T ss_pred             CeecCcCCCCcC---chHHHHHHHHH
Confidence            489999999964   77889999764

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=81.68  E-value=0.73  Score=22.97  Aligned_cols=32  Identities=13%  Similarity=0.269  Sum_probs=23.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |.....-.|
T Consensus        12 ~~~C~~C~k~F~---~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2elz_A           12 PYKCEDCGKGYN---RRLNLDMHQRV-HMGEKTSGP   43 (46)
T ss_dssp             SCBCSSSCCBCS---SHHHHHHHGGG-GGSCCCCCS
T ss_pred             CeeCcccCchhC---CHHHHHHHHHh-cCCCCCCCC
Confidence            489999999974   77899999875 544333344

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=81.55  E-value=0.57  Score=20.58  Aligned_cols=22  Identities=23%  Similarity=0.393  Sum_probs=18.4

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|.   ....|..|...
T Consensus         3 ~~C~~C~k~f~---~~~~l~~H~~~   24 (29)
T 1rik_A            3 FACPECPKRFM---RSDHLTLHILL   24 (29)
T ss_dssp             EECSSSSCEES---CSHHHHHHHTG
T ss_pred             ccCCCCCchhC---CHHHHHHHHHH
Confidence            68999999964   67889999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=81.51  E-value=0.74  Score=25.44  Aligned_cols=28  Identities=21%  Similarity=0.333  Sum_probs=23.3

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      ..+.|.+|...|   .....|..|....|..
T Consensus        14 k~~~C~~C~~~f---~~~~~l~~H~~~~~~~   41 (86)
T 1x6h_A           14 KPYACSHCDKTF---RQKQLLDMHFKRYHDP   41 (86)
T ss_dssp             CCEECSSSSCEE---SSHHHHHHHHHHTTCS
T ss_pred             CCCcCCCCCCcc---CCHHHHHHHHHHhcCC
Confidence            348999999996   4678999999988865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=81.39  E-value=0.83  Score=24.99  Aligned_cols=25  Identities=16%  Similarity=0.363  Sum_probs=14.3

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      +.|.+|...|.   ....|..|....+.
T Consensus        18 ~~C~~C~k~f~---~~~~l~~H~~~H~~   42 (74)
T 2lce_A           18 YKCDRCQASFR---YKGNLASHKTVHTG   42 (74)
T ss_dssp             BCCTTSSCCBS---CHHHHHHHHHHHCC
T ss_pred             eECCCCCceeC---CHHHHHHHHHHcCC
Confidence            56666666643   45566666654333

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.33  E-value=0.37  Score=26.17  Aligned_cols=26  Identities=12%  Similarity=0.229  Sum_probs=13.8

Q ss_pred             ccch-hhhhhhhccCChhHHHHHHHhcCCC
Q 034948           38 IQCK-VCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        38 i~C~-vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      +.|. +|...|.   ....|..|...--|.
T Consensus        37 ~~C~~~C~k~f~---~~~~L~~H~~~hc~~   63 (66)
T 2eod_A           37 VACPNQCGVGTV---AREDLPGHLKDSCNT   63 (66)
T ss_dssp             EECTTCCSCCEE---ETTTHHHHHHTTSSS
T ss_pred             ccCCcccCcccc---cHHHHHHHHHhhccc
Confidence            5666 6666654   334566665533343

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=81.26  E-value=0.3  Score=24.52  Aligned_cols=23  Identities=22%  Similarity=0.495  Sum_probs=19.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|   .....|..|...
T Consensus        12 ~~~C~~C~k~f---~~~~~L~~H~~~   34 (46)
T 2ytt_A           12 PYQCSECGKSF---SGSYRLTQHWIT   34 (46)
T ss_dssp             TTCCSSSCCCC---SSHHHHHHHHTH
T ss_pred             CeeCCCCCccc---CCHHHHHHHHHH
Confidence            48999999996   477899999876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=81.21  E-value=0.87  Score=23.68  Aligned_cols=26  Identities=23%  Similarity=0.535  Sum_probs=21.0

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcC
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      ..+.|.+|...|.   ....|..|...-+
T Consensus        23 k~~~C~~C~k~f~---~~~~L~~H~~~H~   48 (54)
T 1yui_A           23 QPATCPICYAVIR---QSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEES---SHHHHHHHHHHHT
T ss_pred             CCccCCCCCcccC---CHHHHHHHHHHhc
Confidence            3589999999964   7789999987643

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=80.97  E-value=0.66  Score=25.37  Aligned_cols=28  Identities=14%  Similarity=0.318  Sum_probs=19.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      .+.|.+|...|   .....|..|...-+...
T Consensus        14 ~~~C~~C~k~f---~~~~~L~~H~~~h~~~~   41 (72)
T 1x6e_A           14 PYGCVECGKAF---SRSSILVQHQRVHTGEK   41 (72)
T ss_dssp             CEECSSSCCEE---SSHHHHHHHHHGGGCSC
T ss_pred             CccCCCCCCcc---CCHHHHHHHHHhcCCCC
Confidence            47888888885   46677888877544333

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.87  E-value=0.7  Score=21.67  Aligned_cols=23  Identities=17%  Similarity=0.408  Sum_probs=19.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~   31 (36)
T 2els_A            9 IFTCEYCNKVFK---FKHSLQAHLRI   31 (36)
T ss_dssp             CEECTTTCCEES---SHHHHHHHHHH
T ss_pred             CEECCCCCceeC---CHHHHHHHHHH
Confidence            489999999974   77899999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=80.77  E-value=1  Score=25.42  Aligned_cols=22  Identities=18%  Similarity=0.386  Sum_probs=12.3

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHh
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      +.|.+|...|   .+...|..|...
T Consensus        37 ~~C~~C~~~f---~~~~~l~~H~~~   58 (96)
T 2dmd_A           37 YKCKTCDYAA---ADSSSLNKHLRI   58 (96)
T ss_dssp             EECSSSCCEE---SSHHHHHHHHHH
T ss_pred             EeCCCCCCcc---CCHHHHHHHHHH
Confidence            5566666654   245556666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.69  E-value=0.69  Score=21.69  Aligned_cols=25  Identities=24%  Similarity=0.557  Sum_probs=20.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .+.|.+|...|.   ....|..|... |.
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~-H~   33 (36)
T 2elv_A            9 LYDCHICERKFK---NELDRDRHMLV-HG   33 (36)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHTT-TS
T ss_pred             CeECCCCCCccC---CHHHHHHHHHH-hc
Confidence            489999999964   77899999764 54

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.69  E-value=0.36  Score=24.19  Aligned_cols=32  Identities=16%  Similarity=0.310  Sum_probs=23.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      .+.|.+|...|.   ....|..|... |..+..-.|
T Consensus        12 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emz_A           12 PFKCNECGKGFG---RRSHLAGHLRL-HSREKSSGP   43 (46)
T ss_dssp             SCCCSSSCCCCS---SHHHHHHHHHH-HHHTTCCCS
T ss_pred             CeECCCCCcccC---CHHHHHHHHHH-hCCCCCCCC
Confidence            489999999964   77889999875 543333345

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.66  E-value=0.34  Score=23.65  Aligned_cols=26  Identities=23%  Similarity=0.511  Sum_probs=20.6

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ....|..|... |..
T Consensus        11 ~~~C~~C~k~f~---~~~~L~~H~~~-H~~   36 (42)
T 2en2_A           11 PYKCETCGARFV---QVAHLRAHVLI-HTG   36 (42)
T ss_dssp             SEECTTTCCEES---SHHHHHHHTHH-HHS
T ss_pred             CEeCCCcChhhC---CHHHHHHHHHH-cCC
Confidence            489999999964   77899999874 543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.17  E-value=0.65  Score=21.62  Aligned_cols=23  Identities=13%  Similarity=0.264  Sum_probs=19.2

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         9 ~~~C~~C~k~f~---~~~~l~~H~~~   31 (36)
T 2elt_A            9 PYKCPQCSYASA---IKANLNVHLRK   31 (36)
T ss_dssp             SEECSSSSCEES---SHHHHHHHHHH
T ss_pred             CCCCCCCCcccC---CHHHHHHHHHH
Confidence            489999999974   77889999864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=80.03  E-value=0.71  Score=19.99  Aligned_cols=23  Identities=17%  Similarity=0.371  Sum_probs=18.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      .+.|.+|...|.   ....|..|...
T Consensus         2 ~~~C~~C~~~f~---~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFN---QVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCC---TTTHHHHHHHH
T ss_pred             CCcCCCCCcccC---CHHHHHHHHHH
Confidence            368999999974   56789999764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=80.02  E-value=1.1  Score=24.45  Aligned_cols=26  Identities=15%  Similarity=0.456  Sum_probs=21.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .+.|.+|...|.   ....|..|....+.
T Consensus        45 ~~~C~~C~k~f~---~~~~L~~H~~~H~~   70 (74)
T 2lce_A           45 PYRCNICGAQFN---RPANLKTHTRIHSG   70 (74)
T ss_dssp             SEECTTTCCEES---CHHHHHHHHHHHCC
T ss_pred             CEECCCCCchhC---CHHHHHHHHHhcCC
Confidence            489999999964   77899999876443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	78
d1wvka_	86	g.82.1.1 (A:) Expressed protein At2g23090/F21P24.1	2e-32

>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Small proteins
fold: Expressed protein At2g23090/F21P24.15
superfamily: Expressed protein At2g23090/F21P24.15
family: Expressed protein At2g23090/F21P24.15
domain: Expressed protein At2g23090/F21P24.15
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  105 bits (264), Expect = 2e-32
 Identities = 66/77 (85%), Positives = 70/77 (90%)

Query: 2  GGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAE 61
          GGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAE
Sbjct: 10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAE 69

Query: 62 AKHPKSDIYACFPHLKK 78
          AKHPK+D+ ACFPHLKK
Sbjct: 70 AKHPKADVVACFPHLKK 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d1wvka_	86	Expressed protein At2g23090/F21P24.15 {Thale cress	100.0
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.05
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.74
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	92.37
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	92.08
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	90.07
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.21
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	88.82
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	88.47
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	86.67
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	85.78
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	84.39
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	84.34
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	80.15

>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Expressed protein At2g23090/F21P24.15
superfamily: Expressed protein At2g23090/F21P24.15
family: Expressed protein At2g23090/F21P24.15
domain: Expressed protein At2g23090/F21P24.15
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-41  Score=217.24  Aligned_cols=76  Identities=86%  Similarity=1.305  Sum_probs=73.1

Q ss_pred             CCccHHHHHHHHHHHHHHHhhhcccCcHHHHHhhccccchhhhhhhhccCChhHHHHHHHhcCCCCCccccCCCCC
Q 034948            2 GGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLK   77 (78)
Q Consensus         2 g~GNg~ka~~~r~rn~kk~~k~~~~SQlkan~~A~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~CFP~~~   77 (78)
                      |||||+|++++|+||+++..+++++|||++|++||+|+|.||||+||+|++.++|.||+||||||++|++|||+|.
T Consensus        10 gGGNg~Ka~~~Rern~~k~~~a~k~SQlk~n~~A~~i~C~vCrqtFm~T~~~~~L~eHae~KHpK~~~~eCFP~l~   85 (86)
T d1wvka_          10 GGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLK   85 (86)
T ss_dssp             SCCCSGGGTTTSTTTCCCSSSSCSSCSSCCCCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGGTTSGGGC
T ss_pred             CCchHHHHHHHHHHHHHhcccCCchhHHHHHHHhhccCcHHHHhHHHHHcchHHHHHHHHccCCCCCHHHhCcccc
Confidence            8999999999999999999866677999999999999999999999999999999999999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0046  Score=31.17  Aligned_cols=27  Identities=26%  Similarity=0.548  Sum_probs=24.4

Q ss_pred             ccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           38 IQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        38 i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      ++|+.|--.   ..|.+.|+-|...||+|+
T Consensus         3 y~cqyc~yr---sadssnlkthiktkhske   29 (30)
T d1klra_           3 YQCQYCEFR---SADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCSSSSCC---CSCSHHHHHHHHHHTSSC
T ss_pred             ccccccccc---cccchhhhhhhhcccccC
Confidence            689999877   889999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.015  Score=30.43  Aligned_cols=33  Identities=18%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      -++|.+|...|-   ....|..|...-|..+..-.|
T Consensus         5 py~C~~Cgk~F~---~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           5 PYICQSCGKGFS---RPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHHHTSCCCCCCCS
T ss_pred             CccCCCCCCCcC---ChHHhhccCcCccCCCcCcCC
Confidence            489999999974   778999999999998765555

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.37  E-value=0.02  Score=32.96  Aligned_cols=32  Identities=25%  Similarity=0.564  Sum_probs=28.8

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      ..|+|.+|+.++-.--+-+-|.-|.+..||-+
T Consensus        21 ~~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~e   52 (60)
T d2ct5a1          21 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEE   52 (60)
T ss_dssp             SCCEETTTTEECCCCSSTHHHHHHHHHSCHHH
T ss_pred             cchHHHHHHHHhcccCCcchHHHHHHhcCHHH
Confidence            46899999999988888899999999999966

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.07  E-value=0.065  Score=27.14  Aligned_cols=28  Identities=25%  Similarity=0.522  Sum_probs=24.1

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      -++|.+|...|   .....|+.|....|.++
T Consensus         8 P~~C~~C~k~F---~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           8 PYECYICHARF---TQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             SEECTTTCCEE---SCHHHHHHHHHHHSSSS
T ss_pred             CEeCCCCcccc---cchHHHHHHcccccCCC
Confidence            48999999996   47789999999889765

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.21  E-value=0.061  Score=25.91  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=18.6

Q ss_pred             ccccchhhhhhhhccCChhHHHHHHHh
Q 034948           36 MSIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        36 ~~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      |-++|+-|-|+||   ..+.|..|.-.
T Consensus         1 mpykcsscsqqfm---qkkdlqshmik   24 (26)
T d2dlqa1           1 MPYKCSSCSQQFM---QKKDLQSHMIK   24 (26)
T ss_dssp             CSEECSSSCCEES---SHHHHHHHHHH
T ss_pred             CCCcccHHHHHHH---HHHHHHHHHHh
Confidence            3578999999998   45778888643

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.078  Score=26.73  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=22.3

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      -++|.+|...|   .....|..|...-|..
T Consensus         8 Py~C~~C~k~F---~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           8 PYACSHCDKTF---RQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CEECSSSSCEE---SSHHHHHHHHHHTTCS
T ss_pred             CEECCCCCCCc---CCHhHHHHhCcccCCC
Confidence            47899999997   4778999999876654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=88.47  E-value=0.093  Score=25.47  Aligned_cols=26  Identities=27%  Similarity=0.643  Sum_probs=20.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      -++|++|...|-   ....|+.|.. -|..
T Consensus         2 p~~C~~C~k~F~---~~~~L~~H~r-~HTg   27 (29)
T d2adra1           2 SFVCEVCTRAFA---RQEHLKRHYR-SHTN   27 (29)
T ss_dssp             CBCCTTTCCCBS---CHHHHHHHHH-TTTS
T ss_pred             cCCCCCCCCCCC---CchHcccccC-cccC
Confidence            378999999974   7789999986 3543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.67  E-value=0.11  Score=25.10  Aligned_cols=23  Identities=26%  Similarity=0.680  Sum_probs=18.8

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHh
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEA   62 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~   62 (78)
                      -++|++|...|.   ....|..|...
T Consensus         3 Py~C~~C~k~F~---~~~~L~~H~r~   25 (28)
T d1a1ia2           3 PFQCRICMRNFS---RSDHLTTHIRT   25 (28)
T ss_dssp             CEECTTTCCEES---CHHHHHHHHHH
T ss_pred             CccCCCCcCEec---ccccccccCCC
Confidence            378999999975   67889999763

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.78  E-value=0.16  Score=24.63  Aligned_cols=26  Identities=23%  Similarity=0.544  Sum_probs=21.0

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPK   66 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK   66 (78)
                      .+.|.+|...|.   ..+.|..|... |.+
T Consensus         2 py~C~~C~k~F~---~~s~L~~H~r~-Htg   27 (29)
T d1sp1a_           2 KFACPECPKRFM---RSDHLSKHIKT-HQN   27 (29)
T ss_dssp             CSCCTTTTCCCS---CSHHHHHHHHG-GGC
T ss_pred             CEECCcCCCeec---chHHhhhhcCc-cCC
Confidence            478999999974   67899999875 544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.39  E-value=0.21  Score=24.39  Aligned_cols=26  Identities=15%  Similarity=0.367  Sum_probs=23.5

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHP   65 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHp   65 (78)
                      .++|+-|-+.   ..+.+-|..|..|-|.
T Consensus         2 k~qcphc~ti---iarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTV---IARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCE---ESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhh---eeehhhhhHHhhhccc
Confidence            4789999998   8999999999999885

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.34  E-value=0.2  Score=24.85  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=20.2

Q ss_pred             ccchh--hhhhhhccCChhHHHHHHHhcC
Q 034948           38 IQCKV--CMQTFMCTTSEVKCREHAEAKH   64 (78)
Q Consensus        38 i~C~v--C~~~Fm~t~~~~~L~~H~e~KH   64 (78)
                      +.|+|  |-..   -++++.|.-|+++-|
T Consensus         3 Y~Ck~~gC~K~---YtdPSSLRKH~k~~H   28 (29)
T d2glia5           3 YVCKLPGCTKR---YTDPSSLRKHVKTVH   28 (29)
T ss_dssp             EECCSTTTCCE---ESSHHHHHHHHHHSC
T ss_pred             eecccCCCCcc---cCCHHHHHHHHHhhC
Confidence            56777  7777   679999999999987

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.99  E-value=0.18  Score=25.51  Aligned_cols=32  Identities=28%  Similarity=0.637  Sum_probs=24.5

Q ss_pred             cccchh--hhhhhhccCChhHHHHHHHhcCCCCCcccc
Q 034948           37 SIQCKV--CMQTFMCTTSEVKCREHAEAKHPKSDIYAC   72 (78)
Q Consensus        37 ~i~C~v--C~~~Fm~t~~~~~L~~H~e~KHpK~~~~~C   72 (78)
                      ++.|++  |...|   .+...|+.|..+ |..+..-.|
T Consensus         1 tf~C~~~~C~k~F---~~~~~L~~H~r~-Htgekpy~C   34 (36)
T d2dlka2           1 SFSCPEPACGKSF---NFKKHLKEHMKL-HSDTRDYIC   34 (36)
T ss_dssp             CEECSCTTTCCEE---SSHHHHHHHHHH-HHTSCCCSC
T ss_pred             CeECCCCCCCCee---CChhHhccccCe-eCCCCCEeC
Confidence            467887  99996   488999999887 866654455

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.15  E-value=0.25  Score=24.88  Aligned_cols=27  Identities=22%  Similarity=0.815  Sum_probs=21.4

Q ss_pred             cccchhhhhhhhccCChhHHHHHHHhcCCCC
Q 034948           37 SIQCKVCMQTFMCTTSEVKCREHAEAKHPKS   67 (78)
Q Consensus        37 ~i~C~vC~~~Fm~t~~~~~L~~H~e~KHpK~   67 (78)
                      -++|.+|...|-   ....|..|.. .|..+
T Consensus         7 Py~C~~C~k~F~---~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           7 PFVCRICLSAFT---TKANCARHLK-VHTDT   33 (35)
T ss_dssp             CEECSSSCCEES---SHHHHHHHHG-GGTSC
T ss_pred             cccCCCCCCccc---ChHHHHHHcc-ccCCc
Confidence            389999999974   7789999976 57543