Citrus Sinensis ID: 035158

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--
Protein Sequence
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHEEEEEcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Flexible Loop (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Low Complexity Region (SEG)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Disordered region (IsUnstruct)
*****ALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY*
Disordered Region (DISOPRED)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Disordered Region (DISEMBL)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Disordered Region (DISPRO)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	72	2.2.26 [Sep-21-2011]
Q8H184	414	Probable sugar phosphate/	yes	no	1.0	0.173	0.833	8e-26
Q10354	374	Uncharacterized transport	yes	no	1.0	0.192	0.361	2e-08
Q9NQQ7	365	Solute carrier family 35	no	no	0.888	0.175	0.406	8e-05

>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1

 Score =  115 bits (288), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 63/72 (87%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GGALAF MV TE+VLVSVTSAVTV IA VVKEAV I+VAVFYFHDEFTWLKG GL  
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMI 364

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 365 IMVGVSLFNWYK 376

Arabidopsis thaliana (taxid: 3702)

>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 45/72 (62%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           +L  G LAFFMV++EF L+  TS VT+ +  ++KE + I+ +  ++HD    +   GL  
Sbjct: 281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVI 340

Query: 61  ILVGVSLFNWYK 72
            L G+ ++N+Y+
Sbjct: 341 TLCGIGVYNYYR 352

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query: 4   GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
           GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct: 249 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 308

Query: 64  GVSL 67
           G+SL
Sbjct: 309 GISL 312

May play an important role in the cellular response to tissue hypoxia.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
212274621	426	uncharacterized protein LOC100191756 [Ze	1.0	0.169	0.833	1e-26
242092016	309	hypothetical protein SORBIDRAFT_10g00375	1.0	0.233	0.833	2e-26
357125272	431	PREDICTED: probable sugar phosphate/phos	1.0	0.167	0.819	6e-26
413953160	431	hypothetical protein ZEAMMB73_691079 [Ze	1.0	0.167	0.805	1e-25
356567380	499	PREDICTED: probable sugar phosphate/phos	1.0	0.144	0.847	1e-25
413953157	363	hypothetical protein ZEAMMB73_691079 [Ze	1.0	0.198	0.805	2e-25
297605201	471	Os06g0153200 [Oryza sativa Japonica Grou	1.0	0.152	0.833	2e-25
215704227	431	unnamed protein product [Oryza sativa Ja	1.0	0.167	0.833	2e-25
222634967	401	hypothetical protein OsJ_20151 [Oryza sa	1.0	0.179	0.833	3e-25
326505650	432	predicted protein [Hordeum vulgare subsp	1.0	0.166	0.819	3e-25

>gi|212274621|ref|NP_001130655.1| uncharacterized protein LOC100191756 [Zea mays] gi|194689754|gb|ACF78961.1| unknown [Zea mays] gi|195616498|gb|ACG30079.1| solute carrier family 35 member C2 [Zea mays] gi|413942911|gb|AFW75560.1| putative Solute carrier family 35 member C2 [Zea mays]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 66/72 (91%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG+LAFFMV TE++L+S TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKGFGLFT
Sbjct: 315 MLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFT 374

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 375 IMVGVSLFNWYK 386

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242092016|ref|XP_002436498.1| hypothetical protein SORBIDRAFT_10g003750 [Sorghum bicolor] gi|241914721|gb|EER87865.1| hypothetical protein SORBIDRAFT_10g003750 [Sorghum bicolor]

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 66/72 (91%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG+LAFFMV TE++L+S TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKGFGLFT
Sbjct: 196 MLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFT 255

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 256 IMVGVSLFNWYK 267

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357125272|ref|XP_003564319.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Brachypodium distachyon]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 65/72 (90%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG+LAFFMV TE++LVS TSA+TV IA VVKE+V ILVAVFYFHDEFTWLKGFGL T
Sbjct: 318 MLIGGSLAFFMVLTEYILVSATSAITVTIAGVVKESVTILVAVFYFHDEFTWLKGFGLIT 377

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 378 IMVGVSLFNWYK 389

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413953160|gb|AFW85809.1| hypothetical protein ZEAMMB73_691079 [Zea mays]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 64/72 (88%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE++L+S TSA+TV IA VVKE+V ILVAVFYFHDEFTWLKG GLFT
Sbjct: 318 MLIGGTLAFFMVLTEYILISATSAITVTIAGVVKESVTILVAVFYFHDEFTWLKGVGLFT 377

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 378 IMVGVSLFNWYK 389

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567380|ref|XP_003551898.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Glycine max]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 64/72 (88%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE+VLVSVTSAVTV IA VVKEAV ILVAV YFHD+FTWLKGFGL T
Sbjct: 390 MLLGGTLAFFMVLTEYVLVSVTSAVTVTIAGVVKEAVTILVAVLYFHDQFTWLKGFGLLT 449

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 450 IMVGVSLFNWYK 461

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413953157|gb|AFW85806.1| hypothetical protein ZEAMMB73_691079 [Zea mays] gi|413953158|gb|AFW85807.1| hypothetical protein ZEAMMB73_691079 [Zea mays]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 64/72 (88%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE++L+S TSA+TV IA VVKE+V ILVAVFYFHDEFTWLKG GLFT
Sbjct: 250 MLIGGTLAFFMVLTEYILISATSAITVTIAGVVKESVTILVAVFYFHDEFTWLKGVGLFT 309

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 310 IMVGVSLFNWYK 321

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297605201|ref|NP_001056840.2| Os06g0153200 [Oryza sativa Japonica Group] gi|255676729|dbj|BAF18754.2| Os06g0153200, partial [Oryza sativa Japonica Group]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 63/72 (87%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE+VLVS TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKG GL T
Sbjct: 358 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 417

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 418 IMVGVSLFNWYK 429

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|215704227|dbj|BAG93067.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 63/72 (87%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE+VLVS TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKG GL T
Sbjct: 318 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 377

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 378 IMVGVSLFNWYK 389

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222634967|gb|EEE65099.1| hypothetical protein OsJ_20151 [Oryza sativa Japonica Group]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 63/72 (87%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG LAFFMV TE+VLVS TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKG GL T
Sbjct: 288 MLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLAT 347

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 348 IMVGVSLFNWYK 359

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326505650|dbj|BAJ95496.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 64/72 (88%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           ML GG+LAFFMV TE++LVS TSA+TV IA VVKEAV ILVAVFYFHDEFTWLKG GL T
Sbjct: 319 MLIGGSLAFFMVLTEYILVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGVGLTT 378

Query: 61  ILVGVSLFNWYK 72
           I+VGVSLFNWYK
Sbjct: 379 IMVGVSLFNWYK 390

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
TAIR|locus:2009190	414	AT1G06470 [Arabidopsis thalian	1.0	0.173	0.833	2.5e-26
POMBASE|SPAC22E12.01	374	SPAC22E12.01 "triose phosphate	1.0	0.192	0.361	2.2e-09
ASPGD|ASPL0000010621	582	AN3948 [Emericella nidulans (t	0.944	0.116	0.382	5.2e-07
MGI|MGI:2385166	364	Slc35c2 "solute carrier family	0.930	0.184	0.402	1.4e-06
UNIPROTKB|F1N141	336	F1N141 "Uncharacterized protei	0.888	0.190	0.406	3.3e-06
UNIPROTKB|I3LL24	364	SLC35C2 "Uncharacterized prote	0.888	0.175	0.406	3.8e-06
UNIPROTKB|Q9NQQ7	365	SLC35C2 "Solute carrier family	0.888	0.175	0.406	3.9e-06
UNIPROTKB|E2RPV5	368	SLC35C2 "Uncharacterized prote	0.888	0.173	0.406	3.9e-06
UNIPROTKB|F5H4T9	394	SLC35C2 "Solute carrier family	0.888	0.162	0.406	4.4e-06
UNIPROTKB|G4MY36	602	MGG_11246 "Nucleotide-sugar tr	0.944	0.112	0.382	8.2e-06

TAIR|locus:2009190 AT1G06470 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 60/72 (83%), Positives = 63/72 (87%)

Query:     1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
             ML GGALAF MV TE+VLVSVTSAVTV IA VVKEAV I+VAVFYFHDEFTWLKG GL  
Sbjct:   305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMI 364

Query:    61 ILVGVSLFNWYK 72
             I+VGVSLFNWYK
Sbjct:   365 IMVGVSLFNWYK 376

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

POMBASE|SPAC22E12.01 SPAC22E12.01 "triose phosphate transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 144 (55.7 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 26/72 (36%), Positives = 45/72 (62%)

Query:     1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
             +L  G LAFFMV++EF L+  TS VT+ +  ++KE + I+ +  ++HD    +   GL  
Sbjct:   281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVI 340

Query:    61 ILVGVSLFNWYK 72
              L G+ ++N+Y+
Sbjct:   341 TLCGIGVYNYYR 352

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035436 "triose phosphate transmembrane transport" evidence=ISM

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=ISM

ASPGD|ASPL0000010621 AN3948 [Emericella nidulans (taxid:162425)]

 Score = 125 (49.1 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query:     5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVG 64
             G LAF M+S+EF L+  +S VT+ I  + KE V I  A   FHD+ T +   GL   +  
Sbjct:   374 GVLAFCMISSEFALLKRSSVVTLSICGIFKEVVTITAAGVIFHDKLTAVNVTGLIVTIGS 433

Query:    65 VSLFNWYK 72
             ++ +N+ K
Sbjct:   434 IASYNYMK 441

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:2385166 Slc35c2 "solute carrier family 35, member C2" [Mus musculus (taxid:10090)]

 Score = 118 (46.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query:     1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
             +L GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G   
Sbjct:   246 LLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFAL 305

Query:    61 ILVGVSL 67
              L G+SL
Sbjct:   306 CLSGISL 312

GO:0003674 "molecular_function" evidence=ND

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO

GO:0005801 "cis-Golgi network" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0036065 "fucosylation" evidence=IDA

GO:0036066 "protein O-linked fucosylation" evidence=IMP;IDA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IDA

UNIPROTKB|F1N141 F1N141 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 114 (45.2 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query:     4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
             GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct:   220 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 279

Query:    64 GVSL 67
             G+SL
Sbjct:   280 GISL 283

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|I3LL24 SLC35C2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query:     4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
             GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct:   249 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 308

Query:    64 GVSL 67
             G+SL
Sbjct:   309 GISL 312

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NQQ7 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query:     4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
             GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct:   249 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 308

Query:    64 GVSL 67
             G+SL
Sbjct:   309 GISL 312

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

UNIPROTKB|E2RPV5 SLC35C2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query:     4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
             GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct:   249 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 308

Query:    64 GVSL 67
             G+SL
Sbjct:   309 GISL 312

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F5H4T9 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query:     4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63
             GG LAF +  +EF+LVS TS++T+ IA + KE   +L+A     D+ + L   G    L 
Sbjct:   278 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 337

Query:    64 GVSL 67
             G+SL
Sbjct:   338 GISL 341

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4MY36 MGG_11246 "Nucleotide-sugar transporter" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 114 (45.2 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 26/68 (38%), Positives = 36/68 (52%)

Query:     5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVG 64
             GA+AF M  +EF L+  TS VT+ IA + KE V I  A   F D  T +   GL   +  
Sbjct:   456 GAIAFAMTVSEFALLQRTSVVTLSIAGIFKEVVTISAASIVFGDTLTIINISGLVVTIGA 515

Query:    65 VSLFNWYK 72
             +  +N+ K
Sbjct:   516 IGAYNYIK 523

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H184	PT106_ARATH	No assigned EC number	0.8333	1.0	0.1739	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Sb10g003750.1 hypothetical protein (309 aa) (Sorghum bicolor)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	72
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	4e-10

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 51.4 bits (124), Expect = 4e-10
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query: 1   MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60
           +L  G LAF    + F L+  TS +T  +A  VK  V I+++V  F D  T+L   GL  
Sbjct: 80  LLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVTFLNILGLAI 139

Query: 61  ILVGVSLFNW 70
            ++GV L+++
Sbjct: 140 AILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.83
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.81
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.63
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.3
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.25
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.24
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.99
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.99
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.15
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.94
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.78
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.77
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.71
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.58
KOG1580	337	consensus UDP-galactose transporter related protei	97.51
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.47
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.46
PRK15430	296	putative chloramphenical resistance permease RarD;	97.41
PLN00411	358	nodulin MtN21 family protein; Provisional	97.39
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.33
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.29
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.26
PRK11689	295	aromatic amino acid exporter; Provisional	97.24
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.18
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.0
PLN00411	358	nodulin MtN21 family protein; Provisional	97.0
PRK11272	292	putative DMT superfamily transporter inner membran	96.88
PRK15430	296	putative chloramphenical resistance permease RarD;	96.85
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.83
PRK11431	105	multidrug efflux system protein; Provisional	96.78
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.71
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.67
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.64
COG2076	106	EmrE Membrane transporters of cations and cationic	96.56
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.52
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.4
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.23
KOG1581	327	consensus UDP-galactose transporter related protei	96.22
PRK11689	295	aromatic amino acid exporter; Provisional	96.15
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.14
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.09
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.04
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.03
COG0697	292	RhaT Permeases of the drug/metabolite transporter	95.66
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.63
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	95.56
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.49
PRK11272	292	putative DMT superfamily transporter inner membran	94.84
COG2510	140	Predicted membrane protein [Function unknown]	94.62
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.59
KOG2765	416	consensus Predicted membrane protein [Function unk	94.38
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	93.29
KOG4510	346	consensus Permease of the drug/metabolite transpor	91.31
KOG1582	367	consensus UDP-galactose transporter related protei	90.26
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	86.61
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	84.39
COG2962	293	RarD Predicted permeases [General function predict	83.92
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	83.06
COG2962	293	RarD Predicted permeases [General function predict	80.13

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.83  E-value=1e-20  Score=119.44  Aligned_cols=69  Identities=33%  Similarity=0.565  Sum_probs=67.6

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.+|++++++|+++|.+++++||+|++|.|++|+++++..|+++|+|++|+.|+.|+.+++.|..+|+|
T Consensus        85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            578999999999999999999999999999999999999999999999999999999999999999987

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.81  E-value=5.8e-21  Score=136.87  Aligned_cols=70  Identities=30%  Similarity=0.478  Sum_probs=67.6

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      .+..++|++|++.|+++++|||+|++|+|++||++++..|+++|+||+|+.|+.|+.+|+.|+.+|++.|
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            4558999999999999999999999999999999999999999999999999999999999999999986

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.63  E-value=1e-15  Score=109.70  Aligned_cols=71  Identities=21%  Similarity=0.395  Sum_probs=69.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      +.+|+.+|++|.++|..++++||+|+++.+++|+++.++.|+++|||++|+.|++|.++++.|+.+|++.|
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999987

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.30  E-value=3.2e-12  Score=91.85  Aligned_cols=71  Identities=28%  Similarity=0.413  Sum_probs=68.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCC-cccchhhHHHHHHHHHHhhhhhcC
Q 035158            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHD-EFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~-~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      +.+||+++|..|++.+++...+|++|++++| .|+.+...++.+.++| |+++.|.+|+.+.+.|..+|++.|
T Consensus       231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            4689999999999999999999999999999 9999999999999988 999999999999999999999874

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.25  E-value=1e-11  Score=86.28  Aligned_cols=66  Identities=24%  Similarity=0.407  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            7 LAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         7 ~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      ..++.|...|..++++||.|.++.+.+|.+..+..|++++||++|+.+++|.++++.|+.+|++.|
T Consensus       230 ~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       230 FFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            455677899999999999999999999999999999999999999999999999999999999875

specificities overlap.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.24  E-value=1e-11  Score=89.65  Aligned_cols=68  Identities=38%  Similarity=0.616  Sum_probs=65.7

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      .+.|.++|++-.+||.+..+||.+|.|++|++||+.++..+..+-+|+++..|++|..+++.|+..|.
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999999999999999999999999999999999994

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.99  E-value=1e-11  Score=89.04  Aligned_cols=72  Identities=26%  Similarity=0.273  Sum_probs=69.5

Q ss_pred             ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      |.++|+++|.+|+.+++-|+.|||+||+|.|..|.+.+.++++.+++|.-+..-|-|-.+.+.|..+|.+.|
T Consensus       258 mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  258 MTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.99  E-value=1.8e-09  Score=75.60  Aligned_cols=71  Identities=23%  Similarity=0.318  Sum_probs=65.9

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      +++++.+..-+...+.+++++||+|.++..+++..+.+.+|+++|++++++.++.|+.+.+.|..+|++.|
T Consensus       229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            45677777777888999999999999999999999999999999999999999999999999999999875

; GO: 0055085 transmembrane transport

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.15  E-value=8.5e-06  Score=56.52  Aligned_cols=69  Identities=20%  Similarity=0.244  Sum_probs=65.4

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      .+++++....|...|....+..|-|+++..+.|-+.+-++++++++.+++.+||.++.+...|+...+.
T Consensus        21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~   89 (244)
T PF04142_consen   21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL   89 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence            568899999999999999999999999999999999999999999999999999999999999987654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.94  E-value=8.8e-06  Score=57.65  Aligned_cols=72  Identities=17%  Similarity=0.226  Sum_probs=68.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158            1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK   72 (72)
Q Consensus         1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k   72 (72)
                      |+++|+.++...+++=+++..||+-|++..|.+.....-+.|.++|++|.+..++..+.+-......|++.|
T Consensus       227 m~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak  298 (309)
T COG5070         227 MFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK  298 (309)
T ss_pred             HHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.78  E-value=0.00012  Score=43.40  Aligned_cols=62  Identities=18%  Similarity=0.328  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      ...-+..-+...+++++-..+......-+.....++++++|++++.+++|..+.+.|+.+-+
T Consensus        64 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   64 TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            35667778888999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=97.77  E-value=1.8e-05  Score=53.04  Aligned_cols=58  Identities=12%  Similarity=0.074  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           11 MVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        11 ~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      ..++..+++++.++.+.+++....-++..++|+++||+++|+.++.|..+.+.|+..|
T Consensus       165 ~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       165 GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            3456788999999999999999999999999999999999999999999999998877

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.71  E-value=2.6e-05  Score=56.31  Aligned_cols=69  Identities=25%  Similarity=0.444  Sum_probs=61.8

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.+++.-+.--=..|.+..++|+||-++.=+++.-+-...|++.|+||+|+.-++|..+...|..+|+-
T Consensus       246 l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  246 LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456666666666677888899999999999999999999999999999999999999999999999975

>TIGR00688 rarD rarD protein

Probab=97.58  E-value=0.00048  Score=46.76  Aligned_cols=65  Identities=14%  Similarity=0.145  Sum_probs=58.2

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      ..|++....+.+-+..++++++-+-++....--+.+.++++++++|+++.++++|..+++.|+.+
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~l  139 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVIS  139 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            35666666778888999999999999999999999999999999999999999999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.51  E-value=0.00012  Score=52.42  Aligned_cols=62  Identities=15%  Similarity=0.214  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHh
Q 035158            5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVS   66 (72)
Q Consensus         5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~   66 (72)
                      ++.+.+-..+.|.-+.+.+|||-||.-+-+...+|++|+++|++|++.+||+|-.+.+.|..
T Consensus       248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~  309 (337)
T KOG1580|consen  248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALT  309 (337)
T ss_pred             HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhh
Confidence            45556667788999999999999999999999999999999999999999999999888764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.47  E-value=0.0013  Score=40.11  Aligned_cols=65  Identities=22%  Similarity=0.329  Sum_probs=51.5

Q ss_pred             HHHHHH-HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            4 GGALAF-FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         4 s~~~af-~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      .|.+.. .-+...+...+..++ .-++.-..--+...++|.++|+|++++.++.|..++++|+.+=.
T Consensus        40 ~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   40 AGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIA  105 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Confidence            345554 556666677777775 55566677888899999999999999999999999999998644

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.46  E-value=0.00073  Score=45.39  Aligned_cols=66  Identities=14%  Similarity=-0.005  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      +++...+.+...|..++++++-+-++.-...-+.+..++.++++|+++++++.|+.+++.|..+..
T Consensus        53 ~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        53 GALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            334445667888899999998888999999999999999999999999999999999999988753

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.41  E-value=0.0012  Score=46.16  Aligned_cols=66  Identities=12%  Similarity=0.151  Sum_probs=58.9

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      .+++.....+.+.|..++++++-.-++....--+.+...++++++|++++++++|+.+++.|+.+-
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence            344555567889999999999999999999999999999999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.39  E-value=0.00096  Score=48.57  Aligned_cols=65  Identities=17%  Similarity=0.297  Sum_probs=58.6

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhh------cCCcccchhhHHHHHHHHHHhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFY------FHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~------f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      +.|++++..+...+.-.+.|||-.-++....--+.+.++++++      ++|+++..+++|+.+++.|+.+
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~l  153 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALV  153 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHH
Confidence            4566666677788999999999999999999999999999998      6999999999999999999875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.33  E-value=0.0011  Score=46.01  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=58.8

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      ..|++....+..++..++++|+-..++.-..--+.+..++.++++|+++.+++.|..+++.|+.+-
T Consensus        70 ~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        70 PVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            345556677788999999999999999999999999999999999999999999999999998753

specificities overlap.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.29  E-value=0.0014  Score=43.93  Aligned_cols=56  Identities=13%  Similarity=0.130  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHH
Q 035158           10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGV   65 (72)
Q Consensus        10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~   65 (72)
                      .-...-+..+++.++-+.++.....-+.....++++++|++++.++.|..+.+.|+
T Consensus       204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            33445677899999999999999999999999999999999999999999999986

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.26  E-value=0.0023  Score=44.55  Aligned_cols=58  Identities=10%  Similarity=0.130  Sum_probs=53.8

Q ss_pred             HHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158           14 TEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   71 (72)
Q Consensus        14 ~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~   71 (72)
                      .-+..+++.+|-+-++...+.-+.....|++++||++++.+++|.++.+.|.+.+++.
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            4467899999999999999999999999999999999999999999999999988653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.24  E-value=0.0023  Score=44.61  Aligned_cols=60  Identities=12%  Similarity=0.047  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      ...-...-+..+++.+|...++...+.-++-+..|++++||++|+.+++|.++.+.|+..
T Consensus       225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~  284 (295)
T PRK11689        225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL  284 (295)
T ss_pred             HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence            333445567889999999999999999999999999999999999999999999999754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.18  E-value=0.0022  Score=44.30  Aligned_cols=65  Identities=11%  Similarity=0.031  Sum_probs=54.8

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      .+++.......+.+...+++++-.-++.....-+....+++++++|+++..+++|+.+.+.|+.+
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~l  132 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLV  132 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            45555666677777778888777777777788999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.00  E-value=0.0022  Score=39.66  Aligned_cols=43  Identities=16%  Similarity=0.216  Sum_probs=35.8

Q ss_pred             hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      ..+.+.. .--+.+...|+++|||++|+++++|+.+.+.|+..=
T Consensus        65 ~Ay~~~~-l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         65 IAYPMLS-LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            3344444 666788899999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.00  E-value=0.0052  Score=44.79  Aligned_cols=58  Identities=12%  Similarity=0.146  Sum_probs=53.2

Q ss_pred             HHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158           14 TEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   71 (72)
Q Consensus        14 ~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~   71 (72)
                      .-+..+++.+|..-++...+--++..+.|++++||++++.+++|.++.+.|+.+-++-
T Consensus       272 lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        272 IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            3455899999999999999999999999999999999999999999999999886653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.88  E-value=0.0084  Score=41.69  Aligned_cols=58  Identities=17%  Similarity=0.116  Sum_probs=53.2

Q ss_pred             HHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           13 STEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        13 ~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      ..-+..+++.++-+-++.....-+.....|++++||++|+.+++|..+.+.|+.+-++
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            4566778999999999999999999999999999999999999999999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.85  E-value=0.01  Score=41.39  Aligned_cols=59  Identities=14%  Similarity=0.085  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      .-..+-+..+++.+|-+-+....+.-+.-+..|++++||++|+.+++|..+.+.|+...
T Consensus       225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~  283 (296)
T PRK15430        225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF  283 (296)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            44556778899999999999999999999999999999999999999999998877654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.83  E-value=0.004  Score=38.79  Aligned_cols=46  Identities=20%  Similarity=0.218  Sum_probs=39.4

Q ss_pred             hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..-+.
T Consensus        58 iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         58 IAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4566666667888999999999999999999999999999987543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.78  E-value=0.0046  Score=38.29  Aligned_cols=46  Identities=7%  Similarity=0.079  Sum_probs=41.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158           24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus        24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      .+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..-+
T Consensus        56 gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         56 GTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            4678888888899999999999999999999999999999998654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.73  E-value=0.0055  Score=38.23  Aligned_cols=46  Identities=15%  Similarity=0.218  Sum_probs=40.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158           24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus        24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      .+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..=+
T Consensus        62 gvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         62 SVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3567787888889999999999999999999999999999997643

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.71  E-value=0.0098  Score=42.83  Aligned_cols=65  Identities=12%  Similarity=0.273  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      .-|++.+..+...+..++.+|+-..++.-..--+.+.+++.++++|+.+.+++.|+.+.+.|+.+
T Consensus       119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l  183 (350)
T PTZ00343        119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVAL  183 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence            34566666666777888899988888888888899999999999999999999999999999975

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.67  E-value=0.0065  Score=44.71  Aligned_cols=67  Identities=18%  Similarity=0.261  Sum_probs=62.7

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      +.+.+...+|-..|......+|.|++|..++|-.-+-..++++.+++++.+||.-.++.+.|+..=+
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            5677888999999999999999999999999999999999999999999999999999999998654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.64  E-value=0.0062  Score=38.60  Aligned_cols=45  Identities=22%  Similarity=0.345  Sum_probs=38.6

Q ss_pred             hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158           25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus        25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      +.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..=+
T Consensus        58 iAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         58 VAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence            456665556788899999999999999999999999999987644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.56  E-value=0.0097  Score=37.20  Aligned_cols=47  Identities=28%  Similarity=0.327  Sum_probs=41.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      .+.|++-.=+-.+.+...|+++|+|++++.+++|+.+.++|+..-+.
T Consensus        57 gvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          57 GVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            35677888888899999999999999999999999999999987554

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.52  E-value=0.0042  Score=42.92  Aligned_cols=60  Identities=8%  Similarity=0.154  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      +..-...-+..+++.++-+-+....+--+.....|++++||++|+.+++|..+.+.|+.+
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            333444555667777776666666666789999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.40  E-value=0.014  Score=42.60  Aligned_cols=63  Identities=16%  Similarity=0.328  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      |++=+.-|.......++||..+.+.....--+.+..+|+++++++.++.+++|+.+++.|+.+
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~l  148 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVL  148 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Confidence            556667888999999999999999999999999999999999999999999999999999874

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.23  E-value=0.04  Score=38.40  Aligned_cols=53  Identities=17%  Similarity=0.201  Sum_probs=47.9

Q ss_pred             HHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           16 FVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        16 f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      +..+++.+|-+.+....+--+.....|++++||++++.+++|..+.+.|+..=
T Consensus       233 ~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            34568889999999999999999999999999999999999999999998763

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.22  E-value=0.0043  Score=45.25  Aligned_cols=64  Identities=13%  Similarity=0.142  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158            7 LAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus         7 ~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      .+-.-....|.-|++-.|+|+...-..+..+.+.+|.+.|+.+++..|+.|+.+.+.|..+=.+
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            3334445678899999999999999999999999999999999999999999999999876444

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.15  E-value=0.04  Score=38.40  Aligned_cols=47  Identities=28%  Similarity=0.411  Sum_probs=40.1

Q ss_pred             ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158           21 VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus        21 ~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      .+++..-++....--+.+..+++++++|++++++++|+.+++.|+.+
T Consensus        88 ~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~l  134 (295)
T PRK11689         88 RRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAW  134 (295)
T ss_pred             cccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhh
Confidence            45556667777777888899999999999999999999999999865

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.14  E-value=0.045  Score=36.45  Aligned_cols=65  Identities=20%  Similarity=0.191  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhH-hhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAV-FYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~-~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      ++.....+..-+..++++++-+..+....--+.+...+. ++++|+++.+++.|..+.+.|+.+-.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~  142 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLIL  142 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhee
Confidence            344445556666668889999999999999999999996 66699999999999999999987643

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.09  E-value=0.039  Score=38.65  Aligned_cols=67  Identities=15%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158            4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus         4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      .+++-+.-+..+....+..|.=|+.+.--.|-+.+.+.+.++++++.+..++++..+..+|++....
T Consensus        70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~  136 (303)
T PF08449_consen   70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTL  136 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeee
Confidence            4566677778888999999999999999999999999999999999999999999999999987654

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.04  E-value=0.049  Score=38.21  Aligned_cols=69  Identities=10%  Similarity=0.031  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhh----HHHHHHHHHHhhhhhcC
Q 035158            4 GGALAFFMVSTEFVLVS-VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKG----FGLFTILVGVSLFNWYK   72 (72)
Q Consensus         4 s~~~af~~n~~~f~~i~-~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~----~G~~i~~~G~~~Y~~~k   72 (72)
                      .|++...-+..-+.-.+ +..+-+.++.....-+.-...++++++|+.+++|.    +|..+.+.|+.+=...|
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            56665444555556667 89999999999999999999999999999999999    99999999998765544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.03  E-value=0.082  Score=33.60  Aligned_cols=34  Identities=32%  Similarity=0.558  Sum_probs=27.5

Q ss_pred             HHHhhhH--hhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           37 VNILVAV--FYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        37 ~~i~~s~--~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      .....++  .+|+|++|+.+++|..+.++|+.+-+.
T Consensus        87 ~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         87 LVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            3444444  489999999999999999999987654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=95.66  E-value=0.11  Score=34.48  Aligned_cols=60  Identities=13%  Similarity=0.193  Sum_probs=51.6

Q ss_pred             HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           11 MVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        11 ~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      --...+...++.++-.-+......-+..+..++++++|+.+..+++|..+.+.|....+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            344456678888888888888888888888999999999999999999999999988764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.63  E-value=0.012  Score=43.09  Aligned_cols=61  Identities=18%  Similarity=0.282  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.|++...+.++-|+-|.++.-.+++.++=..+...+-|.+...|+.|..+-+.|++.|+-
T Consensus       274 ffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  274 FFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             eeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3588889999999999999999999999999999999999999999999999999999974

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=95.56  E-value=0.12  Score=35.93  Aligned_cols=54  Identities=15%  Similarity=0.204  Sum_probs=41.1

Q ss_pred             HHHHHHhcc-chhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158           14 TEFVLVSVT-SAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus        14 ~~f~~i~~t-S~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      ..|...+++ ++=.-++.-..--+.+..+++++++|+++.++++|..++++|+.+
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l  129 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLV  129 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHH
Confidence            445555554 333344455566788899999999999999999999999999875

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.49  E-value=0.037  Score=40.37  Aligned_cols=56  Identities=18%  Similarity=0.504  Sum_probs=50.9

Q ss_pred             HHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158           16 FVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY   71 (72)
Q Consensus        16 f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~   71 (72)
                      -.++..+||..+++.=-.-+.-.++.++++|++++++.-++|.++.+.|...|+..
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            35788999999999888889999999999999999999999999999999999753

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=94.84  E-value=0.29  Score=33.96  Aligned_cols=56  Identities=13%  Similarity=0.078  Sum_probs=42.0

Q ss_pred             HHHHHHHH-hccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           12 VSTEFVLV-SVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        12 n~~~f~~i-~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      +...+... +.+|+-.-++.-..--+.+..++.+ ++|+++.++++|+.++++|+.+-
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll  139 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLL  139 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHH
Confidence            33444444 5566555666666677788888875 79999999999999999998764

>COG2510 Predicted membrane protein [Function unknown]

Probab=94.62  E-value=0.028  Score=36.71  Aligned_cols=34  Identities=15%  Similarity=0.465  Sum_probs=30.4

Q ss_pred             HHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           35 EAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        35 ~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      -++.+..|++++||++|..+++|+.+..+|..+-
T Consensus       104 vvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510         104 VVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            3578899999999999999999999999998653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.59  E-value=0.061  Score=32.11  Aligned_cols=53  Identities=17%  Similarity=0.137  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHhccch--hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHH
Q 035158            8 AFFMVSTEFVLVSVTSA--VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT   60 (72)
Q Consensus         8 af~~n~~~f~~i~~tS~--lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i   60 (72)
                      .+..++.-+...-|.=|  +.|.+-.-.-.+.+...|+.+|+|++|+.+++|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            44444443333333333  345565556778999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.38  E-value=0.069  Score=40.14  Aligned_cols=66  Identities=20%  Similarity=0.249  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158            4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN   69 (72)
Q Consensus         4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~   69 (72)
                      =|.+=|+-|+..-..++.||.-..++..-.-...++.+|.++-+|++|..+.++..+++.|+++-+
T Consensus       165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt  230 (416)
T KOG2765|consen  165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVT  230 (416)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEE
Confidence            367778999999999999999999999999999999999999999999999999999999987643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=93.29  E-value=0.35  Score=33.92  Aligned_cols=61  Identities=18%  Similarity=0.171  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHhccchhHH-HHHHHHHHHHHHhhhHhhcCCcccchh----hHHHHHHHHHHhhhhh
Q 035158           10 FMVSTEFVLVSVTSAVTV-QIAAVVKEAVNILVAVFYFHDEFTWLK----GFGLFTILVGVSLFNW   70 (72)
Q Consensus        10 ~~n~~~f~~i~~tS~lT~-sV~g~~K~v~~i~~s~~~f~~~~t~~~----~~G~~i~~~G~~~Y~~   70 (72)
                      .-|++-|..+++++.=+- .+....--+...+.|.++|+|+.+.++    ++|..+++.|..+...
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~  136 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR  136 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence            345666666665443222 122334445677899999999999999    9999999999887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=91.31  E-value=0.073  Score=38.83  Aligned_cols=65  Identities=20%  Similarity=0.299  Sum_probs=44.1

Q ss_pred             hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      +-|+++|.--+-.|+...+.|----.+.=-..-++++..++.+.+||.|..+.+|..+++.|+.+
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL  166 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL  166 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence            34556655555555554433321111222235678999999999999999999999999999865

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.26  E-value=1.9  Score=31.73  Aligned_cols=64  Identities=17%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158            5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus         5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      ++.+|+-..+...+|+...+++-.-.-+.+..+++++|.++|..|+|.+-.-|-.+.+.|+.+=
T Consensus       267 s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln  330 (367)
T KOG1582|consen  267 SLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLN  330 (367)
T ss_pred             HHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhh
Confidence            4455666666777888899999999999999999999999999999999999999999998763

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=86.61  E-value=6.3  Score=25.09  Aligned_cols=66  Identities=29%  Similarity=0.459  Sum_probs=47.4

Q ss_pred             hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhh-hHh-hc---CCcccchhhHHHHHHHHHHhh
Q 035158            2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILV-AVF-YF---HDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~-s~~-~f---~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      .+.|.++-..-.++...+.+..+-+..+.-..-+++.-.+ -.+ .|   ++|+++.+++|..+.++|+.+
T Consensus        68 ~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   68 YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4578888888888888888888877776666555443221 111 12   258999999999999999863

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=84.39  E-value=0.91  Score=28.55  Aligned_cols=61  Identities=21%  Similarity=0.349  Sum_probs=42.7

Q ss_pred             HHHHHHHHH----HHHHhccc-hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158            7 LAFFMVSTE----FVLVSVTS-AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus         7 ~af~~n~~~----f~~i~~tS-~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      ..|++|.+.    |+.++++- +++.-+++-+--+.+.+.++++.+|..++..++|+.+.+.|+.+
T Consensus        46 ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   46 IPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            456666654    22233221 23334556777889999999988888899999999999999753

Many members are annotated as potential transmembrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=83.92  E-value=1.3  Score=32.19  Aligned_cols=46  Identities=13%  Similarity=0.285  Sum_probs=36.9

Q ss_pred             chhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158           23 SAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF   68 (72)
Q Consensus        23 S~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y   68 (72)
                      ..+.-|..=-+.-.+.+.+|.++++|++++.|++-+.++.+|+..=
T Consensus        97 ~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          97 HVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             chhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            4444444445566778899999999999999999999999998753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=83.06  E-value=2.9  Score=29.89  Aligned_cols=55  Identities=22%  Similarity=0.297  Sum_probs=41.4

Q ss_pred             HHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158           13 STEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL   67 (72)
Q Consensus        13 ~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~   67 (72)
                      ..++...+...+--.+=.|-+--+....++..+.+|+++..++.|..+++.|...
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l  119 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL  119 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence            3444444444444445556777778889999999999999999999999999864

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=80.13  E-value=7.3  Score=28.34  Aligned_cols=50  Identities=18%  Similarity=0.230  Sum_probs=40.5

Q ss_pred             ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           21 VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        21 ~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.+==|..+...+.-.++..+++++|+||++.-+....+..-.|.+.|+.
T Consensus       234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            33333445555667788999999999999999999999999999988864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	72
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.25
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.24

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.25  E-value=0.0015  Score=41.10  Aligned_cols=44  Identities=20%  Similarity=0.207  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           27 VQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        27 ~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      +.+...+--+.+.+.|+++|+|++|+.+++|+.+.+.|+..-+.
T Consensus        60 y~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           60 YAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44436778899999999999999999999999999999998764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.24  E-value=0.0025  Score=38.29  Aligned_cols=50  Identities=18%  Similarity=0.181  Sum_probs=40.2

Q ss_pred             ccchhHH--HHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158           21 VTSAVTV--QIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW   70 (72)
Q Consensus        21 ~tS~lT~--sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~   70 (72)
                      |.-|++.  .+..-.--+.+...|+++|+|++|+.+++|+.+.+.|+..-+.
T Consensus        52 ~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           52 AYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3444443  3435667888899999999999999999999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00