Citrus Sinensis ID: 035198

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Secondary Structure (PSIPRED)
ccccccccccEEEEcHHHHHHHHHcccEEEEEEEEEccccEEEEEEEccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEcHHHHHHHHHcccEEEEEEEEEEcccEEEEEEEccccccHHHcccHcEEEcccccc
Coil and Loop (DISEMBL)
mplrlddgwNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRriyfsdrlyseeelppefklylpmqkt
Flexible Loop (DISEMBL)
MPLRLDDGWNQIQLNLADFTRRAYGTNYVEtlrvqvhancRLRRIYFsdrlyseeelppefklylpmqkt
Low Complexity Region (SEG)
MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Disordered region (IsUnstruct)
******DGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSE****************
Disordered Region (DISOPRED)
MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPM***
Disordered Region (DISEMBL)
MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Disordered Region (DISPRO)
*PLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPM***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQKT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	70	2.2.26 [Sep-21-2011]
Q9VKV8	199	UPF0468 protein CG5343 OS	yes	no	0.985	0.346	0.855	1e-32
Q6GL74	193	UPF0468 protein C16orf80	yes	no	0.971	0.352	0.852	5e-32
Q6GPY6	193	UPF0468 protein C16orf80	N/A	no	0.971	0.352	0.852	5e-32
Q5ZHP3	193	UPF0468 protein C16orf80	yes	no	0.971	0.352	0.852	5e-32
Q8BTU1	193	UPF0468 protein C16orf80	yes	no	0.971	0.352	0.852	5e-32
Q6B857	193	UPF0468 protein C16orf80	yes	no	0.971	0.352	0.852	5e-32
Q6PBJ2	192	UPF0468 protein C16orf80	yes	no	0.971	0.354	0.852	6e-32
Q9Y6A4	193	UPF0468 protein C16orf80	yes	no	0.971	0.352	0.852	1e-31
Q61JK7	203	UPF0468 protein C16orf80	N/A	no	0.971	0.334	0.75	3e-29
Q86D25	203	UPF0468 protein C16orf80	yes	no	0.971	0.334	0.75	3e-29

>sp|Q9VKV8|U0468_DROME UPF0468 protein CG5343 OS=Drosophila melanogaster GN=CG5343 PE=1 SV=1

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 68/69 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFSDRLYSE+ELPPE
Sbjct: 121 MPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFSDRLYSEDELPPE 180

Query: 61  FKLYLPMQK 69
           FKL+LP+QK
Sbjct: 181 FKLFLPIQK 189

Drosophila melanogaster (taxid: 7227)

>sp|Q6GL74|CP080_XENTR UPF0468 protein C16orf80 homolog OS=Xenopus tropicalis PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Xenopus tropicalis (taxid: 8364)

>sp|Q6GPY6|CP080_XENLA UPF0468 protein C16orf80 homolog OS=Xenopus laevis PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Xenopus laevis (taxid: 8355)

>sp|Q5ZHP3|CP080_CHICK UPF0468 protein C16orf80 homolog OS=Gallus gallus GN=RCJMB04_34o2 PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Gallus gallus (taxid: 9031)

>sp|Q8BTU1|CP080_MOUSE UPF0468 protein C16orf80 homolog OS=Mus musculus GN=Gtl3 PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Mus musculus (taxid: 10090)

>sp|Q6B857|CP080_BOVIN UPF0468 protein C16orf80 homolog OS=Bos taurus PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Bos taurus (taxid: 9913)

>sp|Q6PBJ2|CP080_DANRE UPF0468 protein C16orf80 homolog OS=Danio rerio GN=zgc:73380 PE=2 SV=1

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Danio rerio (taxid: 7955)

>sp|Q9Y6A4|CP080_HUMAN UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf80 PE=1 SV=1

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (95%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP+Q
Sbjct: 181 FKLYLPVQ 188

Homo sapiens (taxid: 9606)

>sp|Q61JK7|CP080_CAEBR UPF0468 protein C16orf80 homolog OS=Caenorhabditis briggsae GN=CBG09753 PE=3 SV=1

 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 65/68 (95%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP E
Sbjct: 121 MPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP++
Sbjct: 181 FKLYLPIR 188

Caenorhabditis briggsae (taxid: 6238)

>sp|Q86D25|CP080_CAEEL UPF0468 protein C16orf80 homolog OS=Caenorhabditis elegans GN=C54C6.6 PE=3 SV=1

 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 65/68 (95%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP E
Sbjct: 121 MPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAE 180

Query: 61  FKLYLPMQ 68
           FKLYLP++
Sbjct: 181 FKLYLPIR 188

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
255578235	186	orf protein, putative [Ricinus communis]	1.0	0.376	0.942	2e-33
388517243	190	unknown [Lotus japonicus]	1.0	0.368	0.928	4e-33
225464011	190	PREDICTED: UPF0468 protein CG5343 [Vitis	1.0	0.368	0.942	7e-33
116791609	190	unknown [Picea sitchensis]	1.0	0.368	0.928	1e-32
356530569	190	PREDICTED: UPF0468 protein CG5343-like [	1.0	0.368	0.914	2e-32
357515357	218	hypothetical protein MTR_8g040630 [Medic	0.985	0.316	0.927	2e-32
224075878	191	predicted protein [Populus trichocarpa]	0.985	0.361	0.942	2e-32
356548806	190	PREDICTED: LOW QUALITY PROTEIN: UPF0468	1.0	0.368	0.914	2e-32
217074284	189	unknown [Medicago truncatula] gi|3884951	0.985	0.365	0.927	2e-32
388500224	97	unknown [Lotus japonicus]	1.0	0.721	0.914	3e-32

>gi|255578235|ref|XP_002529985.1| orf protein, putative [Ricinus communis] gi|223530508|gb|EEF32390.1| orf protein, putative [Ricinus communis]

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/70 (94%), Positives = 69/70 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPL++D+GWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 117 MPLKMDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 176

Query: 61  FKLYLPMQKT 70
           FKLYLPMQK 
Sbjct: 177 FKLYLPMQKA 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517243|gb|AFK46683.1| unknown [Lotus japonicus]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 69/70 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPL++DDGWNQIQ NLADFT+RAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLKMDDGWNQIQFNLADFTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQKT 70
           FKLYLPMQK+
Sbjct: 181 FKLYLPMQKS 190

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464011|ref|XP_002265223.1| PREDICTED: UPF0468 protein CG5343 [Vitis vinifera] gi|296087820|emb|CBI35076.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 66/70 (94%), Positives = 68/70 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLR+D+GWN IQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNTIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQKT 70
           FKLYLPMQK 
Sbjct: 181 FKLYLPMQKA 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116791609|gb|ABK26040.1| unknown [Picea sitchensis]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 68/70 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLRLDDGWNQIQ NL DFTRRAYGTNYVETLRVQVHANCR+RRIYFSDRLYSEEELPPE
Sbjct: 121 MPLRLDDGWNQIQFNLTDFTRRAYGTNYVETLRVQVHANCRIRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQKT 70
           FKLYLP+QK+
Sbjct: 181 FKLYLPIQKS 190

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530569|ref|XP_003533853.1| PREDICTED: UPF0468 protein CG5343-like [Glycine max]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 68/70 (97%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLR+D+GWNQIQ NL DFT+RAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNQIQFNLVDFTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQKT 70
           FKLYLPMQK+
Sbjct: 181 FKLYLPMQKS 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357515357|ref|XP_003627967.1| hypothetical protein MTR_8g040630 [Medicago truncatula] gi|355521989|gb|AET02443.1| hypothetical protein MTR_8g040630 [Medicago truncatula]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 68/69 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLR+D+GWNQIQ NLADFT++AYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 150 MPLRMDEGWNQIQFNLADFTKKAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 209

Query: 61  FKLYLPMQK 69
           FKLYLPMQK
Sbjct: 210 FKLYLPMQK 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075878|ref|XP_002304809.1| predicted protein [Populus trichocarpa] gi|222842241|gb|EEE79788.1| predicted protein [Populus trichocarpa]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 69/69 (100%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPL+LD+GWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLKLDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQK 69
           FKLYLP+Q+
Sbjct: 181 FKLYLPVQQ 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548806|ref|XP_003542790.1| PREDICTED: LOW QUALITY PROTEIN: UPF0468 protein CG5343-like [Glycine max]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 69/70 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLR+D+GWNQIQ NLADFT+RAYGTNYVETL+VQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNQIQFNLADFTKRAYGTNYVETLQVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQKT 70
           FKLYLPMQK+
Sbjct: 181 FKLYLPMQKS 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074284|gb|ACJ85502.1| unknown [Medicago truncatula] gi|388495166|gb|AFK35649.1| unknown [Medicago truncatula]

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 68/69 (98%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLR+D+GWNQIQ NLADFT++AYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNQIQFNLADFTKKAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 61  FKLYLPMQK 69
           FKLYLPMQK
Sbjct: 181 FKLYLPMQK 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500224|gb|AFK38178.1| unknown [Lotus japonicus]

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 69/70 (98%)

Query: 1  MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
          +PL++DDGWNQIQ NLADFT+RAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
Sbjct: 28 VPLKMDDGWNQIQFNLADFTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 87

Query: 61 FKLYLPMQKT 70
          FKLYLPMQK+
Sbjct: 88 FKLYLPMQKS 97

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
TAIR|locus:2082184	190	BUG22 "AT3G12300" [Arabidopsis	0.985	0.363	0.884	4.2e-31
FB|FBgn0032248	199	CG5343 [Drosophila melanogaste	0.985	0.346	0.855	5.4e-31
UNIPROTKB|Q5ZHP3	193	RCJMB04_34o2 "UPF0468 protein	0.971	0.352	0.852	2.3e-30
UNIPROTKB|Q6B857	193	Q6B857 "UPF0468 protein C16orf	0.971	0.352	0.852	2.3e-30
UNIPROTKB|E2R3J4	193	C16orf80 "Uncharacterized prot	0.971	0.352	0.852	2.3e-30
UNIPROTKB|F2Z513	193	C16orf80 "Uncharacterized prot	0.971	0.352	0.852	2.3e-30
MGI|MGI:107428	193	Gtl3 "gene trap locus 3" [Mus	0.971	0.352	0.852	2.3e-30
ZFIN|ZDB-GENE-040426-1784	192	zgc:73380 "zgc:73380" [Danio r	0.971	0.354	0.852	2.3e-30
UNIPROTKB|Q9Y6A4	193	C16orf80 "UPF0468 protein C16o	0.971	0.352	0.852	3.8e-30
FB|FBgn0032291	293	CG17118 [Drosophila melanogast	0.9	0.215	0.650	2.1e-20

TAIR|locus:2082184 BUG22 "AT3G12300" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MPL++D+GWNQIQLNLAD TRRAYGTNY ETLRVQ+HANCRLRRIYF+DRLYSEEELPPE
Sbjct:   121 MPLKMDEGWNQIQLNLADLTRRAYGTNYAETLRVQIHANCRLRRIYFADRLYSEEELPPE 180

Query:    61 FKLYLPMQK 69
             FKLYLP+QK
Sbjct:   181 FKLYLPVQK 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

FB|FBgn0032248 CG5343 [Drosophila melanogaster (taxid:7227)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 59/69 (85%), Positives = 68/69 (98%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFSDRLYSE+ELPPE
Sbjct:   121 MPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFSDRLYSEDELPPE 180

Query:    61 FKLYLPMQK 69
             FKL+LP+QK
Sbjct:   181 FKLFLPIQK 189

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0048666 "neuron development" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

UNIPROTKB|Q5ZHP3 RCJMB04_34o2 "UPF0468 protein C16orf80 homolog" [Gallus gallus (taxid:9031)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|Q6B857 Q6B857 "UPF0468 protein C16orf80 homolog" [Bos taurus (taxid:9913)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|E2R3J4 C16orf80 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

UNIPROTKB|F2Z513 C16orf80 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

MGI|MGI:107428 Gtl3 "gene trap locus 3" [Mus musculus (taxid:10090)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IDA

ZFIN|ZDB-GENE-040426-1784 zgc:73380 "zgc:73380" [Danio rerio (taxid:7955)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 58/68 (85%), Positives = 66/68 (97%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q9Y6A4 C16orf80 "UPF0468 protein C16orf80" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 58/68 (85%), Positives = 65/68 (95%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP E
Sbjct:   121 MPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query:    61 FKLYLPMQ 68
             FKLYLP+Q
Sbjct:   181 FKLYLPVQ 188

GO:0005929 "cilium" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=TAS

FB|FBgn0032291 CG17118 [Drosophila melanogaster (taxid:7227)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 41/63 (65%), Positives = 55/63 (87%)

Query:     1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
             MP+ +  GWNQIQ NLADFTRRAYG+NY+ET+ +Q+HAN R+RRIYF+D+LY+E ELP +
Sbjct:   133 MPMGMSPGWNQIQFNLADFTRRAYGSNYLETVSLQLHANVRIRRIYFADKLYTEAELPND 192

Query:    61 FKL 63
             ++L
Sbjct:   193 YRL 195

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0048813 "dendrite morphogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q86D25	CP080_CAEEL	No assigned EC number	0.75	0.9714	0.3349	yes	no
Q6GL74	CP080_XENTR	No assigned EC number	0.8529	0.9714	0.3523	yes	no
Q6PBJ2	CP080_DANRE	No assigned EC number	0.8529	0.9714	0.3541	yes	no
Q6B857	CP080_BOVIN	No assigned EC number	0.8529	0.9714	0.3523	yes	no
Q9Y6A4	CP080_HUMAN	No assigned EC number	0.8529	0.9714	0.3523	yes	no
Q8BTU1	CP080_MOUSE	No assigned EC number	0.8529	0.9714	0.3523	yes	no
Q9VKV8	U0468_DROME	No assigned EC number	0.8550	0.9857	0.3467	yes	no
Q5ZHP3	CP080_CHICK	No assigned EC number	0.8529	0.9714	0.3523	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002025001 SubName- Full=Chromosome undetermined scaffold_125, whole genome shotgun sequence; (190 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	70
pfam05018	190	pfam05018, DUF667, Protein of unknown function (DU	1e-41

>gnl|CDD|191163 pfam05018, DUF667, Protein of unknown function (DUF667)

 Score =  133 bits (336), Expect = 1e-41
 Identities = 53/68 (77%), Positives = 62/68 (91%)

Query: 1   MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 60
           MPLRLD GWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YF DRLY+E+ELPPE
Sbjct: 121 MPLRLDPGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFCDRLYTEDELPPE 180

Query: 61  FKLYLPMQ 68
            +LY P +
Sbjct: 181 LRLYCPKK 188

This family of proteins are highly conserved in eukaryotes. Some proteins in the family are annotated as transcription factors. However, there is currently no support for this in the literature. Length = 190

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
PF05018	190	DUF667: Protein of unknown function (DUF667); Inte	100.0
KOG3213	238	consensus Transcription factor IIB [Transcription]	100.0

>PF05018 DUF667: Protein of unknown function (DUF667); InterPro: IPR007714 This family of proteins are highly conserved in eukaryotes

Probab=100.00  E-value=9.9e-35  Score=204.99  Aligned_cols=69  Identities=77%  Similarity=1.374  Sum_probs=67.7

Q ss_pred             CCcccCcCcchhhccHHHHHHHHhCcceeEEEEEEEecceeeeeeeecccCCCCcCCcccceecccccc
Q 035198            1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQK   69 (70)
Q Consensus         1 mPl~L~~GWN~i~~nL~d~t~~aygT~yvet~rv~i~anCRirRiYFsdrlYs~~eLP~efkl~~~~~~   69 (70)
                      |||+|++|||+|+|||+++|+++|||+|+||++|+||||||||||||||++|++||||+||||++|.+.
T Consensus       121 iPl~l~~~W~~l~idL~~~~~~~y~~~~~~sl~i~I~ancrlRrIyfsD~ly~~~elp~~~~l~~~~~~  189 (190)
T PF05018_consen  121 IPLRLSPGWNNLQIDLADLTRRAYGTNYFESLRIQICANCRLRRIYFSDRLYSEDELPPEFKLYLPKQE  189 (190)
T ss_pred             cccccCCCcEEEEEEHHHHHHHHhccCceEEEEEEEecCEEEEEEEecCccCChhhCchhhEEccccCC
Confidence            799999999999999999999999999999999999999999999999999999999999999999874

Some proteins in the family are annotated as transcription factors. However, there is currently no support for this in the literature.

>KOG3213 consensus Transcription factor IIB [Transcription]

Probab=100.00  E-value=6.7e-34  Score=209.77  Aligned_cols=69  Identities=75%  Similarity=1.250  Sum_probs=67.2

Q ss_pred             CCcccCcCcchhhccHHHHHHHHhCcceeEEEEEEEecceeeeeeeecccCCCCcCCcccceecccccc
Q 035198            1 MPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQK   69 (70)
Q Consensus         1 mPl~L~~GWN~i~~nL~d~t~~aygT~yvet~rv~i~anCRirRiYFsdrlYs~~eLP~efkl~~~~~~   69 (70)
                      |||.|++||||||+||+|||+++|||+|.||++||||||||||||||+|++|+++|+|.+||++.+.++
T Consensus       121 mPl~m~~~W~~iqlnL~dft~~~~~~~y~etl~iql~AncriRriyf~~kl~~~~e~~~~frlm~rf~~  189 (238)
T KOG3213|consen  121 MPLVMDAGWNQIQLNLADFTRRAYGTNYGETLSIQLHANCRIRRIYFADKLYSEAELPLEFRLMLRFQV  189 (238)
T ss_pred             cceEecCcceeEEeeHHHHHHHHhccceeeEEEEEEecceEEEEEEeccccCChhhCCCcceEcccccC
Confidence            899999999999999999999999999999999999999999999999999999999999999988764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00