Citrus Sinensis ID: 035231

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccc
Coil and Loop (DISEMBL)
MGFLVTTLVFLVIGIIASLCTriccnrgpstnlLHLTLVITATVSCWMMWAIVYLAQMkplivpilseee
Flexible Loop (DISEMBL)
MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE
Low Complexity Region (SEG)
MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE
Disordered region (IsUnstruct)
**FLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPIL****
Disordered Region (DISOPRED)
*GFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLI*PI*****
Disordered Region (DISEMBL)
MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE
Disordered Region (DISPRO)
*GFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILS***
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
224116642	70	predicted protein [Populus trichocarpa]	1.0	1.0	0.914	5e-29
224061069	70	predicted protein [Populus trichocarpa]	1.0	1.0	0.914	1e-28
388494592	70	unknown [Lotus japonicus]	1.0	1.0	0.914	3e-28
356567028	70	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.885	7e-28
18423731	70	ATPase, V0 complex, subunit E [Arabidops	1.0	1.0	0.871	8e-28
350538935	70	V-type proton ATPase subunit e-like prec	1.0	1.0	0.857	9e-28
167599639	70	ATP synthase subunit H protein [Hevea br	1.0	1.0	0.885	1e-27
297796401	70	ATP synthase subunit H family protein [A	1.0	1.0	0.857	1e-27
356527107	70	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.871	2e-27
26986112	70	vacuolar ATPase subunit e-like [Mesembry	1.0	1.0	0.885	2e-27

>gi|224116642|ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|118481681|gb|ABK92781.1| unknown [Populus trichocarpa] gi|222860419|gb|EEE97966.1| predicted protein [Populus trichocarpa]

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 68/70 (97%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLVTTL+F+V+GIIASLCTRICCNRGPSTNLLHLTLV+TATV CWMMWAIVYLAQMKP
Sbjct: 1  MGFLVTTLIFVVVGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPILSE E
Sbjct: 61 LIVPILSEGE 70

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061069|ref|XP_002300343.1| predicted protein [Populus trichocarpa] gi|118482559|gb|ABK93200.1| unknown [Populus trichocarpa] gi|118489389|gb|ABK96499.1| unknown [Populus trichocarpa x Populus deltoides] gi|222847601|gb|EEE85148.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGF VTTL+F VIGIIASLCTRICCNRGPSTNLLHLTLV+TATV CWMMWAIVYLAQMKP
Sbjct: 1  MGFFVTTLIFAVIGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPILSE E
Sbjct: 61 LIVPILSEGE 70

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494592|gb|AFK35362.1| unknown [Lotus japonicus]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/70 (91%), Positives = 65/70 (92%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLVTTL+F VIGIIA LCTRICCNRGPSTNL HLTLVITATV CWMMWAIVYLAQMKP
Sbjct: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATVCCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPILSE E
Sbjct: 61 LIVPILSEGE 70

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567028|ref|XP_003551725.1| PREDICTED: uncharacterized protein LOC100781475 isoform 1 [Glycine max] gi|356567030|ref|XP_003551726.1| PREDICTED: uncharacterized protein LOC100781475 isoform 2 [Glycine max]

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLVTTL+F+VIGIIA LCTRICCNRGPSTNL HLTLVITAT+ CWMMWAIVYLAQMKP
Sbjct: 1  MGFLVTTLIFVVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPIL+E E
Sbjct: 61 LIVPILNEGE 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423731|ref|NP_568823.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana] gi|238481571|ref|NP_001154781.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana] gi|13926255|gb|AAK49600.1|AF372884_1 AT5g55290/MCO15_24 [Arabidopsis thaliana] gi|9758126|dbj|BAB08598.1| unnamed protein product [Arabidopsis thaliana] gi|16323226|gb|AAL15347.1| AT5g55290/MCO15_24 [Arabidopsis thaliana] gi|227204441|dbj|BAH57072.1| AT5G55290 [Arabidopsis thaliana] gi|332009227|gb|AED96610.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana] gi|332009228|gb|AED96611.1| ATPase, V0 complex, subunit E [Arabidopsis thaliana]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFL+TTL+F+V+GIIASLC RICCNRGPSTNLLHLTLVITATV CWMMWAIVY+AQM P
Sbjct: 1  MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEEE 70
          LIVPILSE E
Sbjct: 61 LIVPILSETE 70

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538935|ref|NP_001234110.1| V-type proton ATPase subunit e-like precursor [Solanum lycopersicum] gi|62751089|dbj|BAD95792.1| similar to ATP synthase subunit H protein [Solanum lycopersicum]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLVTTL+F+ IG+IASLC RICCNRGPSTNLLHLTL+ITATV CWMMWAIVYLAQ+KP
Sbjct: 1  MGFLVTTLIFVAIGVIASLCARICCNRGPSTNLLHLTLIITATVCCWMMWAIVYLAQLKP 60

Query: 61 LIVPILSEEE 70
          LIVP+LSE E
Sbjct: 61 LIVPVLSEGE 70

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|167599639|gb|ABZ88805.1| ATP synthase subunit H protein [Hevea brasiliensis]

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 65/70 (92%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLV TL+F+VIGIIASLCTRICCNRGPS NL HLTLVITATV CWMMWAIVYLAQMKP
Sbjct: 1  MGFLVITLIFVVIGIIASLCTRICCNRGPSANLFHLTLVITATVCCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPIL+E E
Sbjct: 61 LIVPILNEGE 70

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796401|ref|XP_002866085.1| ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata] gi|297311920|gb|EFH42344.1| ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFL+TTL+F+V+GIIA+LC RICCNRGPSTNLLHLTLVITATV CWMMWAIVY+AQM P
Sbjct: 1  MGFLITTLIFVVVGIIAALCARICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEEE 70
          LIVPILSE E
Sbjct: 61 LIVPILSETE 70

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527107|ref|XP_003532155.1| PREDICTED: uncharacterized protein LOC100527598 [Glycine max]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 65/70 (92%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFLVTTL+F+VIGIIA LCTRICCNRGPS NL HLTLVITAT+ CWMMWAIVYLAQMKP
Sbjct: 1  MGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LIVPIL+E E
Sbjct: 61 LIVPILNEGE 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26986112|emb|CAD27522.1| vacuolar ATPase subunit e-like [Mesembryanthemum crystallinum]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          MGFL+TTL+FLVIGIIASLCTRIC NRGPSTNLLHLTLV+TATV CWMMWAIVYLAQMKP
Sbjct: 1  MGFLITTLIFLVIGIIASLCTRICFNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 61 LIVPILSEEE 70
          LI PIL+E E
Sbjct: 61 LINPILNESE 70

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
TAIR|locus:2161625	70	AT5G55290 [Arabidopsis thalian	1.0	1.0	0.871	3.8e-30
TAIR|locus:2116392	70	AT4G26710 [Arabidopsis thalian	1.0	1.0	0.814	2.2e-27
FB|FBgn0028663	89	VhaM9.7-b "Vacuolar H[+] ATPas	0.871	0.685	0.373	2.6e-06
FB|FBgn0035521	85	VhaM9.7-a "Vacuolar H[+] ATPas	0.6	0.494	0.441	7e-06
POMBASE|SPBC1685.16	67	vma9 "V-type ATPase V0 subunit	0.885	0.925	0.359	1.1e-05
WB|WBGene00009882	86	vha-17 [Caenorhabditis elegans	0.528	0.430	0.447	1.1e-05
UNIPROTKB|J9P236	81	ATP6V0E1 "V-type proton ATPase	0.957	0.827	0.308	1.5e-05
UNIPROTKB|Q9BDP4	81	ATP6V0E1 "V-type proton ATPase	0.957	0.827	0.308	1.5e-05
UNIPROTKB|Q5ZJC4	81	ATP6V0E1 "Uncharacterized prot	0.942	0.814	0.318	1.9e-05
UNIPROTKB|P81103	81	ATP6V0E1 "V-type proton ATPase	0.942	0.814	0.333	3.9e-05

TAIR|locus:2161625 AT5G55290 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query:     1 MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
             MGFL+TTL+F+V+GIIASLC RICCNRGPSTNLLHLTLVITATV CWMMWAIVY+AQM P
Sbjct:     1 MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query:    61 LIVPILSEEE 70
             LIVPILSE E
Sbjct:    61 LIVPILSETE 70

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

TAIR|locus:2116392 AT4G26710 [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)

Query:     1 MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
             M F+VT+L+F V+GIIAS+CTRIC N+GPSTNLLHLTLVITATV CWMMWAIVY+AQM P
Sbjct:     1 MAFVVTSLIFAVVGIIASICTRICFNKGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query:    61 LIVPILSEEE 70
             LIVPILSE E
Sbjct:    61 LIVPILSEVE 70

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

FB|FBgn0028663 VhaM9.7-b "Vacuolar H[+] ATPase M9.7 subunit b" [Drosophila melanogaster (taxid:7227)]

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 25/67 (37%), Positives = 36/67 (53%)

Query:     4 LVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIV 63
             +V T ++  IGII   C      RGP+  +    L++TA  +CW+ W   Y+ Q+ PLI 
Sbjct:     9 IVITSIWAFIGII---CPFFA--RGPNRGVTQCCLILTAA-TCWLFWLCCYMTQLNPLIG 62

Query:    64 PILSEEE 70
             P LS  E
Sbjct:    63 PKLSMNE 69

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=ISM;IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033181 "plasma membrane proton-transporting V-type ATPase complex" evidence=IMP

FB|FBgn0035521 VhaM9.7-a "Vacuolar H[+] ATPase M9.7 subunit a" [Drosophila melanogaster (taxid:7227)]

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query:    27 RGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEE 69
             +GP  NL+   L++TA   CW+ W   Y+AQM PLI P L  +
Sbjct:    28 KGPHQNLIRCILMLTAAC-CWLFWLCCYMAQMNPLIGPKLKRD 69

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=ISS

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=ISM;IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

POMBASE|SPBC1685.16 vma9 "V-type ATPase V0 subunit e (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 23/64 (35%), Positives = 40/64 (62%)

Query:     1 MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
             MG LV  LV L+  ++ S+ +     +G +T+   ++L++T +  C+++WAI YLAQ+ P
Sbjct:     1 MGGLVVLLVGLLTALM-SVVSYYVSPKGNNTSTWQMSLILTFSC-CYLLWAITYLAQLHP 58

Query:    61 LIVP 64
             L  P
Sbjct:    59 LEAP 62

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISO

GO:0000329 "fungal-type vacuole membrane" evidence=ISO

GO:0007035 "vacuolar acidification" evidence=ISO

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IC

GO:0016021 "integral to membrane" evidence=IEA

GO:0042625 "ATPase activity, coupled to transmembrane movement of ions" evidence=ISO

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISM

WB|WBGene00009882 vha-17 [Caenorhabditis elegans (taxid:6239)]

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query:    27 RGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVP 64
             +GP+  ++ L +++TA V CWM W +V+L Q+ PLI P
Sbjct:    27 KGPNRGIIQLMIIMTA-VCCWMFWIMVFLHQLNPLIGP 63

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0060142 "regulation of syncytium formation by plasma membrane fusion" evidence=IGI;IMP

GO:0010172 "embryonic body morphogenesis" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0043296 "apical junction complex" evidence=IDA

UNIPROTKB|J9P236 ATP6V0E1 "V-type proton ATPase subunit e 1" [Canis lupus familiaris (taxid:9615)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query:     2 GFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPL 61
             G  V  +V  V       C      +GP+  ++ +T+++T +V C++ W I  LAQ+ PL
Sbjct:     5 GLTVPLIVMSVFWGFVGFCVPWFIPKGPNRGVI-ITMLVTCSVCCYLFWLIAILAQLNPL 63

Query:    62 IVPILSEE 69
               P L  E
Sbjct:    64 FGPQLKNE 71

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q9BDP4 ATP6V0E1 "V-type proton ATPase subunit e 1" [Canis lupus familiaris (taxid:9615)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query:     2 GFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPL 61
             G  V  +V  V       C      +GP+  ++ +T+++T +V C++ W I  LAQ+ PL
Sbjct:     5 GLTVPLIVMSVFWGFVGFCVPWFIPKGPNRGVI-ITMLVTCSVCCYLFWLIAILAQLNPL 63

Query:    62 IVPILSEE 69
               P L  E
Sbjct:    64 FGPQLKNE 71

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q5ZJC4 ATP6V0E1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query:     2 GFLVTTLVFLVI-GIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
             G  V  +V  V  G++  +   +   +GP+  +++ T+++T  V C++ W I  LAQ+ P
Sbjct:     5 GLTVPIIVMTVFWGVVGGVLPWLV-PKGPNRGVIN-TMLVTCAVCCYLFWLIAILAQLNP 62

Query:    61 LIVPILSEE 69
             L  P LS E
Sbjct:    63 LFGPQLSNE 71

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0016049 "cell growth" evidence=IEA

UNIPROTKB|P81103 ATP6V0E1 "V-type proton ATPase subunit e 1" [Bos taurus (taxid:9913)]

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query:     2 GFLVTTLVFLVI-GIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
             G  V  +V  V  GI+  L       +GP+  ++ +T+++T +V C++ W I  LAQ+ P
Sbjct:     5 GLTVPLIVMSVFWGIVGFLVPWFI-PKGPNRGVI-ITMLVTCSVCCYLFWLIAILAQLNP 62

Query:    61 LIVPILSEE 69
             L  P L  E
Sbjct:    63 LFGPQLKNE 71

GO:0016049 "cell growth" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_XI2889	SubName- Full=Putative uncharacterized protein; (70 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0023015401	SubName- Full=Putative uncharacterized protein; (216 aa)						•			0.899
	fgenesh4_pm.C_LG_II000842	inorganic pyrophosphatase (EC-3.6.1.1) (215 aa)						•			0.899
	fgenesh4_pg.C_LG_VII001101	SubName- Full=Putative uncharacterized protein; (213 aa)						•			0.899
	eugene3.00090843	inorganic pyrophosphatase (EC-3.6.1.1) (298 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XIV0223	SubName- Full=Putative uncharacterized protein; (216 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_XIII0040	vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa)						•			0.899
	estExt_fgenesh4_pg.C_1520062	SubName- Full=Putative uncharacterized protein; (768 aa)						•			0.899
	estExt_fgenesh4_pg.C_1330100	vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_X3050	vacuolar H+-translocating inorganic pyrophosphatase (636 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_I4261	SubName- Full=Putative uncharacterized protein; (296 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	70
pfam05493	65	pfam05493, ATP_synt_H, ATP synthase subunit H	1e-13

>gnl|CDD|147590 pfam05493, ATP_synt_H, ATP synthase subunit H

 Score = 58.8 bits (143), Expect = 1e-13
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 1  MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKP 60
          M  +V T+ + ++G +          +GP+  L+  +L++TA V C++ WAI YLAQ+ P
Sbjct: 1  MPIVVGTVFWALVGAVGPFFA----PKGPNRGLIRSSLILTA-VCCYLFWAITYLAQLNP 55

Query: 61 LIVPILSEEE 70
          LI P LS+  
Sbjct: 56 LIGPRLSDLT 65

ATP synthase subunit H is an extremely hydrophobic of approximately 9 kDa. This subunit may be required for assembly of vacuolar ATPase. Length = 65

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
PF05493	65	ATP_synt_H: ATP synthase subunit H ; InterPro: IPR	100.0
KOG3500	84	consensus Vacuolar H+-ATPase V0 sector, subunit M9	99.97

>PF05493 ATP_synt_H: ATP synthase subunit H ; InterPro: IPR008389 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=3.9e-34  Score=170.22  Aligned_cols=65  Identities=37%  Similarity=0.820  Sum_probs=59.9

Q ss_pred             CcchhhHHHHHHHHHHhhhhhhhhcccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC
Q 035231            1 MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE   70 (70)
Q Consensus         1 Mg~~~~T~~~~~v~~~~~~~~~~~~~kg~~~~l~~~~lv~~a~~ccwL~W~~~YmaQm~PLi~P~~~~~~   70 (70)
                      |++.++|++|+++|++++++++    |||||+++|+ +++++++||||||+|+|||||||||+|+++||+
T Consensus         1 ~~~~~~t~~~~~~g~~~~~~~p----kg~~~~li~~-~~ilt~~CcwL~W~~~ylaQmnPLi~P~~~~~~   65 (65)
T PF05493_consen    1 MPIFIGTIFWALLGIVGPFFVP----KGPNRGLIRT-SLILTAVCCWLFWACTYLAQMNPLIGPQLSNKT   65 (65)
T ss_pred             CCEEEehHHHHHHHHHHheeee----cCCCceeEhH-HHHHHHHHHHHHHHHHHHHHhCcccCCcccCCC
Confidence            7889999999999999988887    9999999999 555667999999999999999999999999985

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents subunit E (or subunit M9.2) found in the V0 complex of certain V-ATPases. The V0 complex contains subunit C (proton-conducting pore), as well as accessory subunits that function in assembly, targeting or regulation of the V-ATPase complex. Subunit E is an extremely hydrophobic protein of approximately 9 kDa, which may be required for assembly of vacuolar ATPases []. The amino terminal domain of subunit E interacts with the H subunit and is required fo V-ATPase function []. Different isoforms of this subunit exist sometimes annotated as E1 and E2 also a neuron-specific isoform, NM9.2 has been identified []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033179 proton-transporting V-type ATPase, V0 domain

>KOG3500 consensus Vacuolar H+-ATPase V0 sector, subunit M9

Probab=99.97  E-value=2e-31  Score=164.82  Aligned_cols=69  Identities=51%  Similarity=0.972  Sum_probs=55.6

Q ss_pred             CcchhhHHHHHHHHHHhhhhhhhhcccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC
Q 035231            1 MGFLVTTLVFLVIGIIASLCTRICCNRGPSTNLLHLTLVITATVSCWMMWAIVYLAQMKPLIVPILSEEE   70 (70)
Q Consensus         1 Mg~~~~T~~~~~v~~~~~~~~~~~~~kg~~~~l~~~~lv~~a~~ccwL~W~~~YmaQm~PLi~P~~~~~~   70 (70)
                      ||+.+.+++|-+++++.++..+.+.||||||+++|+++++|| +||||||+|+|+||||||++|+++++|
T Consensus         1 m~~~v~~l~ftvfw~~v~~~~pi~~~kgP~~~li~~~lvlTA-VCCwlfWli~ylaQlNPLigP~lk~~~   69 (84)
T KOG3500|consen    1 MGFFVPLLVFTVFWGIVGICGPICFPKGPNRGLIRCMLVLTA-VCCWLFWLIVYLAQLNPLIGPQLKEKT   69 (84)
T ss_pred             CCeeEeehHHHHHHHHHHHhcceeccCCCCcChhHHHHHHHH-HHHHHHHHHHHHHHhCcccccccccce
Confidence            565555555555555555555556669999999999887776 899999999999999999999999875

7 (M9.2) [Energy production and conversion]

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00