Citrus Sinensis ID: 035485

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHccccccHHHHHHHHHccccccEEccccccccccccHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHcccccHHHccccHHHHHccccccHHHHHHHHHHcHHHHHHcccccHHHHcccHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MKISYAAICIVFVLLLSEAELSmgamtcnplelspcasaitganapsaicCSKLKEQRICLCqymkdpnlrkfvnspnarkvatvcgspfprc
Flexible Loop (DISEMBL)
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNlrkfvnspnarkvatvcgspfprc
Low Complexity Region (SEG)
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Disordered region (IsUnstruct)
**ISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVN******************
Disordered Region (DISOPRED)
*KISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Disordered Region (DISEMBL)
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Disordered Region (DISPRO)
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	93	2.2.26 [Sep-21-2011]
Q43681	99	Probable non-specific lip	N/A	no	0.860	0.808	0.525	2e-17
P82353	68	Non-specific lipid-transf	N/A	no	0.731	1.0	0.544	4e-16
P20145	102	Probable non-specific lip	N/A	no	0.709	0.647	0.515	2e-14
A2XBN5	96	Non-specific lipid-transf	N/A	no	0.720	0.697	0.492	9e-14
Q10ST8	96	Non-specific lipid-transf	no	no	0.698	0.677	0.476	2e-12
P82900	96	Non-specific lipid-transf	N/A	no	0.709	0.687	0.439	7e-11
P83506	70	Probable non-specific lip	N/A	no	0.731	0.971	0.442	7e-10
P82901	67	Non-specific lipid-transf	N/A	no	0.709	0.985	0.424	1e-09

>sp|Q43681|NLTP_VIGUN Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 55/80 (68%)

Query: 14 LLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKF 73
          L L +      A+TCNP ELS C  AITG + PS+ CCSKLK Q  CLC Y+K+P+L+++
Sbjct: 20 LFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCNYIKNPSLKQY 79

Query: 74 VNSPNARKVATVCGSPFPRC 93
          VNSP A+KV + CG  +P C
Sbjct: 80 VNSPGAKKVLSNCGVTYPNC 99

Potential lipid transfer protein.
Vigna unguiculata (taxid: 3917)

>sp|P82353|NLTP2_PRUAR Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 50/68 (73%)

Query: 26 MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATV 85
          +TC+P++LSPC   I         CC KL+EQR CLC Y+K+P+LR++VNSPNARK+A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 86 CGSPFPRC 93
          CG P P+C
Sbjct: 61 CGVPVPQC 68

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Prunus armeniaca (taxid: 36596)

>sp|P20145|NLTP2_HORVU Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%)

Query: 28  CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
           C P +L+ CASAI G   PS  CC  L+ Q+ CLCQY+KDPN   +V+SP+AR    +CG
Sbjct: 37  CEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKDPNYGHYVSSPHARDTLNLCG 96

Query: 88  SPFPRC 93
            P P C
Sbjct: 97  IPVPHC 102

Potential phospholipid transfer protein.

Hordeum vulgare (taxid: 4513)

>sp|A2XBN5|NLTPX_ORYSI Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVC 86
          +CN  +L+ CA AI G   P+A CCS L+ Q+ C CQ+ KDP   ++VNSPNARK  + C
Sbjct: 29 SCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSC 88

Query: 87 GSPFPRC 93
          G   P C
Sbjct: 89 GIALPTC 95

Transfer lipids across membranes. May play a role in plant defense or in the biosynthesis of cuticle layers.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q10ST8|NLTPX_ORYSJ Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 40/65 (61%)

Query: 29 NPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGS 88
          N  +L+ C  AI G   P+A CCS L+ Q+ C CQ+ KDP   ++VNSPNARK  + CG 
Sbjct: 31 NAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGI 90

Query: 89 PFPRC 93
            P C
Sbjct: 91 ALPTC 95

Transfer lipids across membranes. May play a role in plant defense or in the biosynthesis of cuticle layers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P82900|NLT2G_WHEAT Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 37/66 (56%)

Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          C   +L+ CASAI     PS  CC  L+ Q+ C CQY KDP   +++ SP+AR   T CG
Sbjct: 31 CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCG 90

Query: 88 SPFPRC 93
             P C
Sbjct: 91 LAVPHC 96

Transfer lipids across membranes. May play a role in plant defense or in the biosynthesis of cuticle layers.

Triticum aestivum (taxid: 4565)

>sp|P83506|NLTP2_MAIZE Probable non-specific lipid-transfer protein 2 OS=Zea mays PE=1 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 25 AMTCNPLELSPCAS-AITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVA 83
          A  CNP +L+PCA  A+ G   P A CC++L+ Q+ CLC Y + PN   ++ SPNA ++ 
Sbjct: 1  ANPCNPAQLTPCAGPALFGGAVPPA-CCAQLRAQQGCLCGYARSPNYGSYIRSPNAARLF 59

Query: 84 TVCGSPFPRC 93
           +C  P PRC
Sbjct: 60 AICNLPMPRC 69

Potential phospholipid transfer protein.

Zea mays (taxid: 4577)

>sp|P82901|NLT2P_WHEAT Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          C   +L+ CASAI     PS  CC  L+ Q+ C CQY KDP   +++ SP+AR     CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 88 SPFPRC 93
             P C
Sbjct: 62 LAVPHC 67

Transfer lipids across membranes. May play a role in plant defense or in the biosynthesis of cuticle layers.

Triticum aestivum (taxid: 4565)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
359490972	92	PREDICTED: non-specific lipid-transfer p	0.989	1.0	0.634	5e-28
359472932	92	PREDICTED: probable non-specific lipid-t	0.989	1.0	0.645	6e-28
357500235	92	Non-specific lipid-transfer protein [Med	0.989	1.0	0.666	1e-27
388499034	93	unknown [Lotus japonicus]	1.0	1.0	0.612	2e-27
388492096	92	unknown [Medicago truncatula]	0.989	1.0	0.655	6e-27
118481796	93	unknown [Populus trichocarpa]	1.0	1.0	0.569	4e-26
225452110	92	PREDICTED: non-specific lipid-transfer p	0.989	1.0	0.623	5e-26
224135417	93	predicted protein [Populus trichocarpa]	1.0	1.0	0.569	6e-26
255572170	91	Nonspecific lipid-transfer protein, puta	0.978	1.0	0.637	7e-26
223029879	92	non-specific lipid-transfer protein type	0.989	1.0	0.602	2e-25

>gi|359490972|ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis vinifera]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 77/93 (82%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK+SY A+C V VLLL+EA +++ A+TC+P ELS C  AIT +  PS +CCSK+KEQ+ C
Sbjct: 1  MKVSYIAVCAVLVLLLAEAHITV-AVTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQY+K+PNL+KFVNSPNARKVA+ CG+P P+C
Sbjct: 60 LCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472932|ref|XP_003631218.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Vitis vinifera]

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 77/93 (82%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK+SY A+C   +LL  EA++S  A+TC+P+ELS CA+AI  ++ P+A CCSKLKEQR C
Sbjct: 1  MKMSYIAVCFALLLLFGEAQVST-AVTCSPMELSTCANAIISSSPPTATCCSKLKEQRSC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQY+K+PNL+KF+NSPNARKVA+ CGSPFP C
Sbjct: 60 LCQYVKNPNLQKFINSPNARKVASTCGSPFPNC 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500235|ref|XP_003620406.1| Non-specific lipid-transfer protein [Medicago truncatula] gi|217075044|gb|ACJ85882.1| unknown [Medicago truncatula] gi|355495421|gb|AES76624.1| Non-specific lipid-transfer protein [Medicago truncatula]

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK S  AIC   VLLL   ++SM A+TC+P++LS C SAIT +  PS +CCSK+KEQR C
Sbjct: 1  MKASQIAICTFLVLLLINVQVSM-AVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQYMK+PNLRKFVN+PNARKVA  CG+PFPRC
Sbjct: 60 LCQYMKNPNLRKFVNTPNARKVANTCGTPFPRC 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499034|gb|AFK37583.1| unknown [Lotus japonicus]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 76/93 (81%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK S+ A+  +FVLL++E E+SM  +TC+P++LS C SAIT +  P+ +CCSK+KEQ+ C
Sbjct: 1  MKGSHIALFTLFVLLMAEVEMSMATVTCSPVQLSSCVSAITSSTPPTNLCCSKIKEQKPC 60

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQY+K+P LRKFV+SPNARKVA  CG+PFPRC
Sbjct: 61 LCQYLKNPYLRKFVSSPNARKVANTCGTPFPRC 93

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492096|gb|AFK34114.1| unknown [Medicago truncatula]

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK S  AIC   VLLL   ++SM A+TC+P++LS C SAIT +  PS +CCSK+KEQR C
Sbjct: 1  MKASQIAICTFLVLLLINVQVSM-AVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQYMK+PNL KFVN+PNARKVA  CG+PFPRC
Sbjct: 60 LCQYMKNPNLTKFVNTPNARKVANTCGTPFPRC 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481796|gb|ABK92836.1| unknown [Populus trichocarpa]

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 73/93 (78%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK SY     + VLLL++  + + A+TC+P +LS C SAIT +  PS +CCSK+KEQ+ C
Sbjct: 1  MKTSYMVAYTILVLLLAQEHVKVSAVTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPC 60

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQY+K+PNL+KF+N+PNARKVA+ CG+PFP+C
Sbjct: 61 LCQYLKNPNLQKFINTPNARKVASTCGTPFPKC 93

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452110|ref|XP_002284213.1| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis vinifera]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 76/93 (81%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MKI YAA+C++ V+LLSEA L+  A+TC+PLELS C +AIT +  PS++CCSKL+EQR C
Sbjct: 1  MKIPYAALCVIMVVLLSEAHLT-KAVTCSPLELSSCFAAITSSAPPSSMCCSKLREQRPC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LC Y++DPNL ++VNS NAR+VA+ CG PFP C
Sbjct: 60 LCGYIRDPNLSQYVNSANARRVASTCGVPFPNC 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135417|ref|XP_002322068.1| predicted protein [Populus trichocarpa] gi|222869064|gb|EEF06195.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 73/93 (78%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK SY     + VLLL++  + + A+TC+P +LS C SAIT +  PS +CCSK+KEQ+ C
Sbjct: 1  MKTSYMVAYTLLVLLLAQEHVKVSAVTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPC 60

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQY+K+PNL+KF+N+PNARKVA+ CG+PFP+C
Sbjct: 61 LCQYLKNPNLQKFINTPNARKVASTCGTPFPKC 93

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572170|ref|XP_002527025.1| Nonspecific lipid-transfer protein, putative [Ricinus communis] gi|223533660|gb|EEF35397.1| Nonspecific lipid-transfer protein, putative [Ricinus communis]

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/91 (63%), Positives = 72/91 (79%)

Query: 3  ISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLC 62
          +SY     + VLLL E      A+TC+P+ELS CA+AIT ++ PSAICCSKLK+QR CLC
Sbjct: 1  MSYVTPFFMLVLLLGETVQVTSAVTCDPVELSACANAITSSSPPSAICCSKLKQQRPCLC 60

Query: 63 QYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          QY+K+PNL+K VNSPNA+KVAT+CGSPFP C
Sbjct: 61 QYVKNPNLQKLVNSPNAKKVATICGSPFPNC 91

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223029879|gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamarix hispida]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%), Gaps = 1/93 (1%)

Query: 1  MKISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRIC 60
          MK SYAA+  V +LLLS+ ++S  A+TC+P +LSPC  AIT ++ PS +CCSK+++Q+ C
Sbjct: 1  MKASYAAVFAVVMLLLSQTQVST-AVTCSPAQLSPCVGAITSSSPPSGLCCSKVRQQKPC 59

Query: 61 LCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
          LCQYMK+P LRKFVN+PNA+KVA+ C +PFPRC
Sbjct: 60 LCQYMKNPYLRKFVNTPNAKKVASQCRTPFPRC 92

Source: Tamarix hispida

Species: Tamarix hispida

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
TAIR|locus:2089673	96	AT3G18280 [Arabidopsis thalian	0.946	0.916	0.538	6.8e-24
TAIR|locus:2027849	98	AT1G73780 [Arabidopsis thalian	0.913	0.867	0.465	1.3e-20
TAIR|locus:2008139	94	AT1G48750 [Arabidopsis thalian	0.989	0.978	0.425	3.1e-19
TAIR|locus:2033339	102	AT1G66850 [Arabidopsis thalian	0.731	0.666	0.470	1.3e-15
TAIR|locus:2176712	103	AT5G38170 [Arabidopsis thalian	0.827	0.747	0.443	3.3e-15
TAIR|locus:505006663	95	AT5G38195 [Arabidopsis thalian	0.967	0.947	0.421	8.8e-15
UNIPROTKB|P83506	70	P83506 "Probable non-specific	0.731	0.971	0.442	7.9e-14
TAIR|locus:2176702	103	AT5G38160 [Arabidopsis thalian	0.731	0.660	0.426	3.4e-13
TAIR|locus:1006230047	99	AT2G14846 [Arabidopsis thalian	0.731	0.686	0.426	2.4e-12
TAIR|locus:2176722	95	AT5G38180 [Arabidopsis thalian	0.903	0.884	0.379	3.9e-12

TAIR|locus:2089673 AT3G18280 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 49/91 (53%), Positives = 71/91 (78%)

Query:     3 ISYAAICIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRICLC 62
             +S  A+  V +++L+ A     A+TC+P++LSPCA+AIT ++ PSA+CC+KLKEQR CLC
Sbjct:     9 VSLFALAAVLLMILAPAA---EAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLC 65

Query:    63 QYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
              YM++P+LR+FV++PNARKV+  C  P PRC
Sbjct:    66 GYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2027849 AT1G73780 [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 40/86 (46%), Positives = 60/86 (69%)

Query:     9 CIVFVLLLSEAELSMGAMT-CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKD 67
             C + ++L+   E  + A+  CNP +LSPC   I   + PS +CCSK+KEQ+ C+CQY+K+
Sbjct:    13 CTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKN 72

Query:    68 PNLRKFVNSPNARKVATVCGSPFPRC 93
             PN + F+NSPNA+ +AT C  P+P+C
Sbjct:    73 PNFKSFLNSPNAKIIATDCHCPYPKC 98

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2008139 AT1G48750 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 40/94 (42%), Positives = 67/94 (71%)

Query:     1 MKISYAAI-CIVFVLLLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQRI 59
             +K+ + ++  +   +LL    ++ G +TC+P++L+ CA+A+T ++ PS  CC+KL+EQ+ 
Sbjct:     2 VKVMWVSVLALAAAILLLTVPVAEG-VTCSPMQLASCAAAMTSSSPPSEACCTKLREQQP 60

Query:    60 CLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
             CLC YM++P LR++V+SPNARKV+  C  P P C
Sbjct:    61 CLCGYMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2033339 AT1G66850 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 32/68 (47%), Positives = 45/68 (66%)

Query:    26 MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATV 85
             +TC+  +L PC +AITG   PS  CC+KL EQ+ CLC + K+P   ++++SPNARKV   
Sbjct:    35 VTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVLLA 94

Query:    86 CGSPFPRC 93
             C   +P C
Sbjct:    95 CNVAYPTC 102

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2176712 AT5G38170 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 35/79 (44%), Positives = 49/79 (62%)

Query:    17 SEAELSMGA--MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFV 74
             +E +LS G   +TC+ ++LS CA+ +     PS  CC KLKEQ+ C C Y+KDP   ++V
Sbjct:    25 TEVKLSGGEADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYV 84

Query:    75 NSPNARKVATVCGSPFPRC 93
              S NA+K    CG P+P C
Sbjct:    85 GSANAKKTLATCGVPYPTC 103

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:505006663 AT5G38195 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 40/95 (42%), Positives = 55/95 (57%)

Query:     1 MKISYAAICIVFVL--LLSEAELSMGAMTCNPLELSPCASAITGANAPSAICCSKLKEQR 58
             MK+    + IV +   +L ++E+S    +C P EL PC  A+T    P+  CC KL EQ+
Sbjct:     4 MKLMVITVVIVVMSSPILIKSEVSS---SCIPTELMPCLPAMTTGGQPTKDCCDKLIEQK 60

Query:    59 ICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93
              CLC Y+ +P    FV+SP ARKV  VC  P+P C
Sbjct:    61 ECLCGYINNPLYSTFVSSPVARKVLEVCNIPYPSC 95

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|P83506 P83506 "Probable non-specific lipid-transfer protein 2" [Zea mays (taxid:4577)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:    25 AMTCNPLELSPCAS-AITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVA 83
             A  CNP +L+PCA  A+ G   P A CC++L+ Q+ CLC Y + PN   ++ SPNA ++ 
Sbjct:     1 ANPCNPAQLTPCAGPALFGGAVPPA-CCAQLRAQQGCLCGYARSPNYGSYIRSPNAARLF 59

Query:    84 TVCGSPFPRC 93
              +C  P PRC
Sbjct:    60 AICNLPMPRC 69

GO:0005575 "cellular_component" evidence=ND

GO:0006869 "lipid transport" evidence=NAS

TAIR|locus:2176702 AT5G38160 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 29/68 (42%), Positives = 40/68 (58%)

Query:    26 MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATV 85
             +TC+  +LS C +A++    PS  CC KLKE   CLC Y+++P    +V SPNARK    
Sbjct:    36 VTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAA 95

Query:    86 CGSPFPRC 93
             C   +P C
Sbjct:    96 CDVAYPTC 103

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:1006230047 AT2G14846 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 29/68 (42%), Positives = 40/68 (58%)

Query:    26 MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATV 85
             + C   +L  C  A+   + PS  CC KLKEQ  CLC Y+K P+  ++V+S  A+KV T 
Sbjct:    32 VVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTA 91

Query:    86 CGSPFPRC 93
             C  P P+C
Sbjct:    92 CAIPIPKC 99

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2176722 AT5G38180 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 33/87 (37%), Positives = 47/87 (54%)

Query:    10 IVFVLLLSEAELSMGA---MTCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMK 66
             I FV+++  + + M A    +C P+EL PC  A+T    P+  CC  L +Q+ CLC Y+K
Sbjct:     9 ITFVIIVLSSPILMKAEETQSCVPMELMPCLPAMTKREQPTKDCCENLIKQKTCLCDYIK 68

Query:    67 DPNLRKFVNSPNARKVATVCGSPFPRC 93
             +P    F  S  ARKV   C  P+  C
Sbjct:    69 NPLYSMFTISLVARKVLETCNVPYTSC 95

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q43681	NLTP_VIGUN	No assigned EC number	0.525	0.8602	0.8080	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XV0799 SubName- Full=Putative uncharacterized protein; (93 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	93
cd01959	66	cd01959, nsLTP2, nsLTP2: Non-specific lipid-transf	2e-27
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	2e-05
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	3e-04

>gnl|CDD|238925 cd01959, nsLTP2, nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 94.3 bits (235), Expect = 2e-27
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          CNP +LSPC  AI G + PSA CC+KLKEQ+ CLCQY K+P+L+++VNSPNARKV   CG
Sbjct: 1  CNPTQLSPCLPAILGGSPPSAACCAKLKEQQSCLCQYAKNPSLKQYVNSPNARKVLAACG 60

Query: 88 SPFPRC 93
           P+P C
Sbjct: 61 VPYPNC 66

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene expression has been observed in barley and rice developing seeds, during Zinnia elegans cell differentiation, and under abiotic stress conditions in barley roots. The nsLTP2 of Brassica rapa has also been identified as a potent allergen. Length = 66

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 33 LSPCASAITGAN-APSAICCSKLKE----QRICLCQYMKDPNLRKF--VNSPNARKVATV 85
          L+PC S +TG   AP + CCS LK        CLC  +  P        N+  A  +   
Sbjct: 1  LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAA 60

Query: 86 CG 87
          CG
Sbjct: 61 CG 62

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 36.0 bits (83), Expect = 3e-04
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 30 PLELSPCASAITG-ANAPSAICCSKLKE-QRICLCQYMKDPNL-RKFVNSPNARKVATVC 86
           L+L+PCA  + G    PS  CCS+L++ Q  C C  ++   L  + +N   A  + ++C
Sbjct: 5  LLKLAPCAGYLQGGCQVPSQQCCSQLRQLQAQCRCTAIRAIVLGIEGINPQAAASLPSMC 64

Query: 87 GSPFPR 92
          G   P 
Sbjct: 65 GVNVPY 70

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.85
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.6
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.53
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.45
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.4
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.03
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.76
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	94.15
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	94.05

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.85  E-value=7.2e-22  Score=117.42  Aligned_cols=66  Identities=64%  Similarity=1.313  Sum_probs=61.8

Q ss_pred             cCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485           28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC   93 (93)
Q Consensus        28 C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C   93 (93)
                      |+..+|.+|++|++++.+||++||+.||+++.|+|+|++++.+..++|+++|.+|+++||+++|+|
T Consensus         1 c~~~~L~~C~~ai~~~~~Ps~~CC~~Lk~~~~CLC~y~~~p~l~~~i~~~~A~~l~~~Cgv~~P~C   66 (66)
T cd01959           1 CNPTQLSPCLPAILGGSPPSAACCAKLKEQQSCLCQYAKNPSLKQYVNSPNARKVLAACGVPYPNC   66 (66)
T ss_pred             CChhhcccCHHHHhCCCCCCHHHHHHHhcCCCCeeeeecCccHHhhcCcHHHHHHHHHcCCCCCCC
Confidence            555789999999998889999999999999999999999998888899999999999999999998

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.60  E-value=5.7e-16  Score=93.25  Aligned_cols=60  Identities=33%  Similarity=0.744  Sum_probs=51.5

Q ss_pred             CCcccChhhhcCCC---CCChhhHHhhhhcc-ccccccccCcccccCCChHHHHHhhcccCCCCC
Q 035485           31 LELSPCASAITGAN---APSAICCSKLKEQR-ICLCQYMKDPNLRKFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        31 ~~L~~C~~~v~~~~---~Ps~~CC~~v~~~~-~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      ..|.||++|+++++   +||+.||++||+.+ .|+|.+++.+.+. ++|.++|.+||++||+++|
T Consensus         6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~~~~C~C~~~~~~~~~-~i~~~~a~~Lp~~Cgv~~p   69 (73)
T cd04660           6 DLLAECQPYVTGPNPPPPPSRECCAALRRADLPCLCRYKTSLVLQ-IIDPDKAVYLPAKCGLPLP   69 (73)
T ss_pred             HHHHHHHHHHcCCCCCCCCCHHHHHHHHcCCcCCEeeccCCCccc-ccCHHHHHHHHHHcCCCCC
Confidence            36799999999765   58899999999876 9999888765444 4899999999999999988

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.53  E-value=2.4e-15  Score=93.36  Aligned_cols=66  Identities=39%  Similarity=0.776  Sum_probs=47.5

Q ss_pred             ccccCcCCcccC---hhhhcCCCCCChhhHHhhhh----ccccccccccCcc-cccCCChHHHHHhhcccCCCCC
Q 035485           25 AMTCNPLELSPC---ASAITGANAPSAICCSKLKE----QRICLCQYMKDPN-LRKFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        25 ~~~C~~~~L~~C---~~~v~~~~~Ps~~CC~~v~~----~~~C~C~~ik~~~-~~~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      ..+|. .+|.+|   ..|++++.+||+.||+++|+    +..|+|++++++. ....+|.+++.+||++||++.|
T Consensus        19 ~~~c~-~~l~~c~~~~~~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~   92 (96)
T PF14368_consen   19 CCSCA-NSLLPCCPCLCYVTGGPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVP   92 (96)
T ss_dssp             TTB-H-CCCCHH--HHHHHCC-----HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S
T ss_pred             cchhH-HHHhccccchhccCCCCCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCC
Confidence            34553 457776   78888667999999999999    3499999999765 3345999999999999999987

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.45  E-value=3.2e-14  Score=88.23  Aligned_cols=65  Identities=32%  Similarity=0.645  Sum_probs=52.0

Q ss_pred             ccCc--CCcccChhhhcCCC-CCChhhHHhhhhc---------cccccccccCcccccC-CChHHHHHhhcccCCCCC
Q 035485           27 TCNP--LELSPCASAITGAN-APSAICCSKLKEQ---------RICLCQYMKDPNLRKF-VNSPNARKVATVCGSPFP   91 (93)
Q Consensus        27 ~C~~--~~L~~C~~~v~~~~-~Ps~~CC~~v~~~---------~~C~C~~ik~~~~~~~-~~~~~a~~Lp~~Cgv~~p   91 (93)
                      +|..  ..|.||++|++++. .|++.||+++++.         ..|+|+++++...... +|.++|.+||++||++++
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~   79 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIP   79 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCC
Confidence            5666  46899999999765 8999999999982         2688888876433322 899999999999999875

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.40  E-value=1.9e-13  Score=79.44  Aligned_cols=56  Identities=38%  Similarity=0.733  Sum_probs=46.6

Q ss_pred             cccChhhhcCCC-CCChhhHHhhhhc----cccccccccCccccc-CC-ChHHHHHhhcccCC
Q 035485           33 LSPCASAITGAN-APSAICCSKLKEQ----RICLCQYMKDPNLRK-FV-NSPNARKVATVCGS   88 (93)
Q Consensus        33 L~~C~~~v~~~~-~Ps~~CC~~v~~~----~~C~C~~ik~~~~~~-~~-~~~~a~~Lp~~Cgv   88 (93)
                      |.||++|++++. .||+.||+++++.    ..|+|++++++.... .+ |.+++..||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            579999999874 8999999999984    499999999754432 23 68889999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.03  E-value=2.9e-10  Score=66.98  Aligned_cols=60  Identities=38%  Similarity=0.794  Sum_probs=49.5

Q ss_pred             CcccChhhhcCC---CCCChhhHHhhhhc-c-ccccccccCcccccC----CChHHHHHhhcccCCCCC
Q 035485           32 ELSPCASAITGA---NAPSAICCSKLKEQ-R-ICLCQYMKDPNLRKF----VNSPNARKVATVCGSPFP   91 (93)
Q Consensus        32 ~L~~C~~~v~~~---~~Ps~~CC~~v~~~-~-~C~C~~ik~~~~~~~----~~~~~a~~Lp~~Cgv~~p   91 (93)
                      .+.+|.+|++++   ..|++.||+++++. + .|+|..++.......    ++..++.+||+.||+..+
T Consensus         7 ~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~   75 (79)
T smart00499        7 QLAPCLSYLTGGSPGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPP   75 (79)
T ss_pred             hHHhhHHHHcCCCCCCCCchHHHHHHHHhcccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCC
Confidence            456999999975   38889999999998 6 999998876444433    378889999999999987

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.76  E-value=1.8e-10  Score=70.83  Aligned_cols=62  Identities=24%  Similarity=0.602  Sum_probs=50.6

Q ss_pred             CCcccChhhhcCCC-CCChhhHHhhhhcc-ccccccccCcccc-----------cCCChHHHHHhhcccCCCCCC
Q 035485           31 LELSPCASAITGAN-APSAICCSKLKEQR-ICLCQYMKDPNLR-----------KFVNSPNARKVATVCGSPFPR   92 (93)
Q Consensus        31 ~~L~~C~~~v~~~~-~Ps~~CC~~v~~~~-~C~C~~ik~~~~~-----------~~~~~~~a~~Lp~~Cgv~~p~   92 (93)
                      ..+.+|.+|++++. .|+..||++|++.+ .|.|..++.....           ..++..+|..||+.||+++|.
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~   87 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQLDPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY   87 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHHhHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC
Confidence            35789999999765 78899999999976 9999988753222           136777899999999999886

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=94.15  E-value=0.053  Score=33.64  Aligned_cols=60  Identities=25%  Similarity=0.527  Sum_probs=42.0

Q ss_pred             CcccChhhhcC-----CCCCChhhHHhhhh-----ccccccccccCcccccCCChHH-HHHhhcccCCCCC
Q 035485           32 ELSPCASAITG-----ANAPSAICCSKLKE-----QRICLCQYMKDPNLRKFVNSPN-ARKVATVCGSPFP   91 (93)
Q Consensus        32 ~L~~C~~~v~~-----~~~Ps~~CC~~v~~-----~~~C~C~~ik~~~~~~~~~~~~-a~~Lp~~Cgv~~p   91 (93)
                      +|.-|..-+..     +.+|.++||.-+++     ...|+|-.+|...++..+|.+- ..-+-..||...|
T Consensus        10 kLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958          10 KLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             HhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCC
Confidence            46677776632     34777899999998     2399999998655554444444 5566678999887

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=94.05  E-value=0.025  Score=35.01  Aligned_cols=60  Identities=32%  Similarity=0.633  Sum_probs=42.1

Q ss_pred             CcccChhhhc-----CCCCCChhhHHhhhh-----ccccccccccCcccc-cCCChH-HHHHhhcccCCCCC
Q 035485           32 ELSPCASAIT-----GANAPSAICCSKLKE-----QRICLCQYMKDPNLR-KFVNSP-NARKVATVCGSPFP   91 (93)
Q Consensus        32 ~L~~C~~~v~-----~~~~Ps~~CC~~v~~-----~~~C~C~~ik~~~~~-~~~~~~-~a~~Lp~~Cgv~~p   91 (93)
                      +|.-|...+.     .+.++...||.-+++     ...|+|..+|...+. ..++.+ +...|-..||...|
T Consensus         8 kLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    8 KLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             hhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCc
Confidence            5678888772     133678899999997     239999888864444 223333 36778888999877

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	93
1l6h_A	69	Solution Structure Of Plant Nsltp2 Purified From Ri		5e-14
1n89_A	67	Solution Structure Of A Liganded Type 2 Wheat Non-S		2e-11

>pdb|1L6H|A Chain A, Solution Structure Of Plant Nsltp2 Purified From Rice (Oryza Sativa) Length = 69

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          CN  +L+ C  AI G   P+A CCS L+ Q+ C CQ+ KDP   ++VNSPNARK  + CG
Sbjct: 3  CNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCG 62
Query: 88 SPFPRC 93
             P C
Sbjct: 63 IALPTC 68

>pdb|1N89|A Chain A, Solution Structure Of A Liganded Type 2 Wheat Non-Specific Lipid Transfer Protein Length = 67

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 37/66 (56%)
Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          C   +L+ CASAI     PS  CC  L+ Q+ C CQY KDP   +++ SP+AR   T CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCG 61
Query: 88 SPFPRC 93
             P C
Sbjct: 62 LAVPHC 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	93
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	3e-26
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	3e-25

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1 Length = 69

 Score = 91.1 bits (226), Expect = 3e-26
 Identities = 32/67 (47%), Positives = 41/67 (61%)

Query: 27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVC 86
           CN  +L+ C  AI G   P+A CCS L+ Q+ C CQ+ KDP   ++VNSPNARK  + C
Sbjct: 2  GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSC 61

Query: 87 GSPFPRC 93
          G   P C
Sbjct: 62 GIALPTC 68

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A* Length = 67

 Score = 88.4 bits (219), Expect = 3e-25
 Identities = 29/66 (43%), Positives = 37/66 (56%)

Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          C   +L+ CASAI     PS  CC  L+ Q+ C CQY KDP   +++ SP+AR   T CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCG 61

Query: 88 SPFPRC 93
             P C
Sbjct: 62 LAVPHC 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.85
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.84
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.73
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.64
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.61
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.56
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.54
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.52
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.49
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	92.54
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	92.07
2lvf_A	114	2S albumin; allergen, copper binding, hydrophobic	89.55
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	88.67
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	85.96
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	85.43
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	84.37
1w2q_A	127	Conglutin, ARA H 6; allergen, allergene; NMR {Arac	83.09
1psy_A	125	2S albumin, RICC3; albumin SEED protein, SEED stor	81.36

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.85  E-value=1.2e-22  Score=120.07  Aligned_cols=67  Identities=43%  Similarity=0.947  Sum_probs=61.9

Q ss_pred             ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485           27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC   93 (93)
Q Consensus        27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C   93 (93)
                      +|+.++|.||++|++++++||++||++||++..|+|+|+|++.+..+||.++|.+||++||+++|+|
T Consensus         1 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C   67 (67)
T 1n89_A            1 ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC   67 (67)
T ss_dssp             CCCSSTTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCSCC
T ss_pred             CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence            4777889999999998889999999999999999999999987776799999999999999999988

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.84  E-value=1.3e-22  Score=120.56  Aligned_cols=67  Identities=48%  Similarity=1.032  Sum_probs=62.4

Q ss_pred             ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485           27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC   93 (93)
Q Consensus        27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C   93 (93)
                      +|+.++|.||++|++++++||++||++||++..|+|+|+|++.+..+||.++|.+||++||+++|+|
T Consensus         2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C   68 (69)
T 1l6h_A            2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC   68 (69)
T ss_dssp             CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCC
T ss_pred             CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence            6887899999999998889999999999999999999999987776799999999999999999988

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.73  E-value=4.5e-19  Score=106.93  Aligned_cols=69  Identities=32%  Similarity=0.671  Sum_probs=58.8

Q ss_pred             ccccCc--CCcccChhhhcCC--CCCChhhHHhhhh-ccccccccccCcccccC-CChHHHHHhhcccCCCCC-CC
Q 035485           25 AMTCNP--LELSPCASAITGA--NAPSAICCSKLKE-QRICLCQYMKDPNLRKF-VNSPNARKVATVCGSPFP-RC   93 (93)
Q Consensus        25 ~~~C~~--~~L~~C~~~v~~~--~~Ps~~CC~~v~~-~~~C~C~~ik~~~~~~~-~~~~~a~~Lp~~Cgv~~p-~C   93 (93)
                      ..+|++  .+|.||++|++++  .+||++||++||+ +..|+|.+++++.++.+ ||.++|.+||++||+++| +|
T Consensus         2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C   77 (77)
T 2rkn_A            2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC   77 (77)
T ss_dssp             CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred             cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence            568988  4789999999974  4899999999997 44999999987545543 899999999999999998 87

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.64  E-value=1.5e-17  Score=103.75  Aligned_cols=67  Identities=33%  Similarity=0.685  Sum_probs=55.8

Q ss_pred             ccccCc--CCcccChhhhcCCCCCChhhHHhhhhc---------cccccccccCcccc-cCCChHHHHHhhcccCCCCC
Q 035485           25 AMTCNP--LELSPCASAITGANAPSAICCSKLKEQ---------RICLCQYMKDPNLR-KFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        25 ~~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~~---------~~C~C~~ik~~~~~-~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      +++|++  ..|.||++||++++.|++.||+++++.         ++|+|+++|+.... ..+|.++|..||++||+++|
T Consensus         1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p   79 (93)
T 2ljo_A            1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP   79 (93)
T ss_dssp             CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred             CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence            478988  479999999998878999999999971         37888889863222 35899999999999999987

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.61  E-value=3.5e-17  Score=101.71  Aligned_cols=65  Identities=28%  Similarity=0.636  Sum_probs=54.7

Q ss_pred             cccCc--CCcccChhhhcCCCCCChhhHHhhhh---------c--cccccccccCcccccCCChHHHHHhhcccCCCCC
Q 035485           26 MTCNP--LELSPCASAITGANAPSAICCSKLKE---------Q--RICLCQYMKDPNLRKFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~---------~--~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      ++|++  ..|.||++|++++++|+++||++||+         +  ..|+|.+...+.++ +||.++|.+||++||+++|
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~LP~~Cgv~~p   79 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAALPGKCGVSIP   79 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHHHHHHTTCCCS
T ss_pred             CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHHHHHHcCCCCC
Confidence            57887  37999999999877889999999998         3  38999655445565 7999999999999999976

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.56  E-value=2.3e-16  Score=97.69  Aligned_cols=63  Identities=33%  Similarity=0.762  Sum_probs=51.5

Q ss_pred             cccCc--CCcccChhhhcCCCCCChhhHHhhhh-----------ccccccccccCc--ccccCCChHHHHHhhcccCCCC
Q 035485           26 MTCNP--LELSPCASAITGANAPSAICCSKLKE-----------QRICLCQYMKDP--NLRKFVNSPNARKVATVCGSPF   90 (93)
Q Consensus        26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~-----------~~~C~C~~ik~~--~~~~~~~~~~a~~Lp~~Cgv~~   90 (93)
                      ++|++  ..|.||++|++++++|+++||++||+           +..|+|  +|+.  .++ ++|.++|.+||++||+++
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~~   77 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIH-NLNEDNARSIPPKCGVNL   77 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCT-TCCHHHHHTHHHHHTCCC
T ss_pred             CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccC-CcCHHHHHHHHHHcCCCC
Confidence            35766  47899999999877799999999998           238999  6653  333 689999999999999997


Q ss_pred             C
Q 035485           91 P   91 (93)
Q Consensus        91 p   91 (93)
                      |
T Consensus        78 p   78 (90)
T 1bwo_A           78 P   78 (90)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.54  E-value=6.6e-16  Score=95.74  Aligned_cols=63  Identities=29%  Similarity=0.651  Sum_probs=51.3

Q ss_pred             cccCc--CCcccChhhhcCCCCCChhhHHhhhhc-----------cccccccccCc--ccccCCChHHHHHhhcccCCCC
Q 035485           26 MTCNP--LELSPCASAITGANAPSAICCSKLKEQ-----------RICLCQYMKDP--NLRKFVNSPNARKVATVCGSPF   90 (93)
Q Consensus        26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~~-----------~~C~C~~ik~~--~~~~~~~~~~a~~Lp~~Cgv~~   90 (93)
                      ++|++  ..|.||++|++++++|+++||++||+.           ..|+|  +|+.  .++ .||.++|.+||++||+++
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~~   77 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVNI   77 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCCC
Confidence            46887  378999999998777999999999982           27888  5642  232 589999999999999987


Q ss_pred             C
Q 035485           91 P   91 (93)
Q Consensus        91 p   91 (93)
                      |
T Consensus        78 p   78 (91)
T 1siy_A           78 P   78 (91)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.52  E-value=9.3e-16  Score=95.41  Aligned_cols=66  Identities=30%  Similarity=0.650  Sum_probs=52.1

Q ss_pred             ccccCc--CCcccChhhhcCCC-CCChhhHHhhhhc-----------cccccccccCcccccCCChHHHHHhhcccCCCC
Q 035485           25 AMTCNP--LELSPCASAITGAN-APSAICCSKLKEQ-----------RICLCQYMKDPNLRKFVNSPNARKVATVCGSPF   90 (93)
Q Consensus        25 ~~~C~~--~~L~~C~~~v~~~~-~Ps~~CC~~v~~~-----------~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~   90 (93)
                      +++|++  ..|.||++|+++++ .|+++||++||+.           ..|+|.......++ .||.++|.+||++||+++
T Consensus         1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A~~LP~~C~v~~   79 (93)
T 1afh_A            1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAASIPSKCGVSI   79 (93)
T ss_dssp             CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHHHHHHHHHHCCC
T ss_pred             CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHHHHHHHHcCCCC
Confidence            367887  47999999999866 7888999999984           27888322223444 699999999999999987


Q ss_pred             C
Q 035485           91 P   91 (93)
Q Consensus        91 p   91 (93)
                      |
T Consensus        80 p   80 (93)
T 1afh_A           80 P   80 (93)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.49  E-value=1.8e-15  Score=93.80  Aligned_cols=63  Identities=29%  Similarity=0.653  Sum_probs=51.0

Q ss_pred             ccccCc--CCcccChhhhcCCCCCChhhHHhhhh-----------ccccccccccC--cccccCCChHHHHHhhcccCCC
Q 035485           25 AMTCNP--LELSPCASAITGANAPSAICCSKLKE-----------QRICLCQYMKD--PNLRKFVNSPNARKVATVCGSP   89 (93)
Q Consensus        25 ~~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~-----------~~~C~C~~ik~--~~~~~~~~~~~a~~Lp~~Cgv~   89 (93)
                      +++|++  ..|.||++|++++++|+ +||++||+           +..|+|  +|+  ..++ .+|.++|.+||++||++
T Consensus         1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (91)
T 1t12_A            1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVN   76 (91)
T ss_dssp             CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCC
T ss_pred             CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCC
Confidence            367877  47999999999765677 99999998           238999  564  2344 69999999999999999


Q ss_pred             CC
Q 035485           90 FP   91 (93)
Q Consensus        90 ~p   91 (93)
                      +|
T Consensus        77 ~p   78 (91)
T 1t12_A           77 IP   78 (91)
T ss_dssp             CS
T ss_pred             CC
Confidence            76

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=92.54  E-value=0.059  Score=32.18  Aligned_cols=62  Identities=24%  Similarity=0.618  Sum_probs=43.6

Q ss_pred             ccccCcCCcccChhhhcCCCCCChhhHHhhhh-----ccccccccccCcccccCCChHHHHH-hhcccCCCCC
Q 035485           25 AMTCNPLELSPCASAITGANAPSAICCSKLKE-----QRICLCQYMKDPNLRKFVNSPNARK-VATVCGSPFP   91 (93)
Q Consensus        25 ~~~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~-----~~~C~C~~ik~~~~~~~~~~~~a~~-Lp~~Cgv~~p   91 (93)
                      ..+|.  +|.-|..-+.+...|...||.-+++     ...|+|-.+|  .++. +|.+-+.+ |-..||...|
T Consensus         5 ~~~CP--kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik--~Lgi-lnlpv~L~llln~Cgk~~P   72 (80)
T 1hyp_A            5 RPSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR--ALGI-LNLNRNLQLILNSCGRSYP   72 (80)
T ss_dssp             -CCSC--CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHH--HHTC-SCHHHHHHHHHHHTTCSSC
T ss_pred             CCCCC--chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhcc--ccce-eecChhHHHHHHHhCCcCc
Confidence            34576  6888988774322466789999998     2399998887  3444 57766555 5678999987

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=92.07  E-value=0.099  Score=32.37  Aligned_cols=61  Identities=18%  Similarity=0.358  Sum_probs=42.2

Q ss_pred             cccChhhhcCC---C----------CCChhhHHhhhhcc-ccccccccCcc---cccC---CChHHHHHhhcccCCCCCC
Q 035485           33 LSPCASAITGA---N----------APSAICCSKLKEQR-ICLCQYMKDPN---LRKF---VNSPNARKVATVCGSPFPR   92 (93)
Q Consensus        33 L~~C~~~v~~~---~----------~Ps~~CC~~v~~~~-~C~C~~ik~~~---~~~~---~~~~~a~~Lp~~Cgv~~p~   92 (93)
                      |.+|..||...   .          ..-..||+-++..+ .|.|..|+...   +..-   -....|..||+.||++...
T Consensus        21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~p~~  100 (103)
T 1s6d_A           21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP  100 (103)
T ss_dssp             TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSSSSC
T ss_pred             HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCCccc
Confidence            89999999731   1          12468999999976 99999986421   1110   1223489999999997544


Q ss_pred             C
Q 035485           93 C   93 (93)
Q Consensus        93 C   93 (93)
                      |
T Consensus       101 C  101 (103)
T 1s6d_A          101 C  101 (103)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}

Probab=89.55  E-value=0.043  Score=34.62  Aligned_cols=62  Identities=23%  Similarity=0.417  Sum_probs=41.0

Q ss_pred             CcccChhhhcC----CC---CCC-------hhhHHhhhhcc-ccccccccCc---cccc---C------CChHHHHHhhc
Q 035485           32 ELSPCASAITG----AN---APS-------AICCSKLKEQR-ICLCQYMKDP---NLRK---F------VNSPNARKVAT   84 (93)
Q Consensus        32 ~L~~C~~~v~~----~~---~Ps-------~~CC~~v~~~~-~C~C~~ik~~---~~~~---~------~~~~~a~~Lp~   84 (93)
                      .|..|..||..    +.   .+.       ..||+-|+..+ .|.|..|+..   ....   +      =....|..||+
T Consensus        17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~   96 (114)
T 2lvf_A           17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS   96 (114)
T ss_dssp             HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence            57889999961    11   111       35999999977 9999988641   1110   0      02345999999


Q ss_pred             ccCCCCCCC
Q 035485           85 VCGSPFPRC   93 (93)
Q Consensus        85 ~Cgv~~p~C   93 (93)
                      .||+....|
T Consensus        97 ~C~i~p~~C  105 (114)
T 2lvf_A           97 RCNLSPMRC  105 (114)
T ss_dssp             HHCCCCSCC
T ss_pred             hcCCCcccC
Confidence            999984345

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=88.67  E-value=0.076  Score=30.91  Aligned_cols=46  Identities=22%  Similarity=0.567  Sum_probs=32.5

Q ss_pred             hhhHHhhhhcc-ccccccccCcc---------ccc---CCChHHHHHhhcccCCCCC-CC
Q 035485           48 AICCSKLKEQR-ICLCQYMKDPN---------LRK---FVNSPNARKVATVCGSPFP-RC   93 (93)
Q Consensus        48 ~~CC~~v~~~~-~C~C~~ik~~~---------~~~---~~~~~~a~~Lp~~Cgv~~p-~C   93 (93)
                      ..||+-++..+ .|.|..|+...         +..   .-....|..||+.||+..| .|
T Consensus         8 qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C   67 (72)
T 2ds2_B            8 RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC   67 (72)
T ss_dssp             HHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCC
T ss_pred             HHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcC
Confidence            47999999976 99999987421         110   0123458999999999843 45

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=85.96  E-value=0.06  Score=31.50  Aligned_cols=49  Identities=22%  Similarity=0.521  Sum_probs=33.6

Q ss_pred             CCChhhHHhhhhcc-ccccccccCcc--------cccC---CChHHHHHhhcccCCCCC-CC
Q 035485           45 APSAICCSKLKEQR-ICLCQYMKDPN--------LRKF---VNSPNARKVATVCGSPFP-RC   93 (93)
Q Consensus        45 ~Ps~~CC~~v~~~~-~C~C~~ik~~~--------~~~~---~~~~~a~~Lp~~Cgv~~p-~C   93 (93)
                      ..-..||+-++..+ .|.|..|+...        +..-   -....|..||+.||+..+ .|
T Consensus         9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C   70 (75)
T 1pnb_B            9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC   70 (75)
T ss_dssp             SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCC
T ss_pred             HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCC
Confidence            34468999999976 99999887421        1110   123347889999999854 55

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=85.43  E-value=0.11  Score=39.09  Aligned_cols=46  Identities=26%  Similarity=0.633  Sum_probs=32.6

Q ss_pred             hhhHHhhhhcc---ccccccccCc---ccc------cC-CChHHHHHhhcccCCCCC-CC
Q 035485           48 AICCSKLKEQR---ICLCQYMKDP---NLR------KF-VNSPNARKVATVCGSPFP-RC   93 (93)
Q Consensus        48 ~~CC~~v~~~~---~C~C~~ik~~---~~~------~~-~~~~~a~~Lp~~Cgv~~p-~C   93 (93)
                      ..||+.|+..+   .|.|+-|+..   ...      .. .-...|..||..||+..| +|
T Consensus       429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c  488 (500)
T 3ob4_A          429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC  488 (500)
T ss_dssp             HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCC
T ss_pred             HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccC
Confidence            68999999863   9999888751   110      00 112349999999999977 57

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=84.37  E-value=0.13  Score=31.96  Aligned_cols=62  Identities=23%  Similarity=0.521  Sum_probs=41.0

Q ss_pred             CcccChhhhcC---C-C---CC---------ChhhHHhhhhcc-ccccccccCcc--------cccC---CChHHHHHhh
Q 035485           32 ELSPCASAITG---A-N---AP---------SAICCSKLKEQR-ICLCQYMKDPN--------LRKF---VNSPNARKVA   83 (93)
Q Consensus        32 ~L~~C~~~v~~---~-~---~P---------s~~CC~~v~~~~-~C~C~~ik~~~--------~~~~---~~~~~a~~Lp   83 (93)
                      .|.+|..|+..   + +   .|         -..||+.++..+ .|.|..|+...        +..-   -....|..||
T Consensus        14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP   93 (109)
T 1sm7_A           14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLP   93 (109)
T ss_dssp             CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHH
T ss_pred             cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCH
Confidence            48899999972   1 1   11         247999999977 99999886421        1100   0122378899


Q ss_pred             cccCCCCC-CC
Q 035485           84 TVCGSPFP-RC   93 (93)
Q Consensus        84 ~~Cgv~~p-~C   93 (93)
                      +.||+..+ .|
T Consensus        94 ~~Cnl~~~~~C  104 (109)
T 1sm7_A           94 NVCNMKQIGTC  104 (109)
T ss_dssp             HHSCCCSSCSS
T ss_pred             HhcCCCCCCCC
Confidence            99999854 45

>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}

Probab=83.09  E-value=0.48  Score=30.36  Aligned_cols=60  Identities=22%  Similarity=0.497  Sum_probs=40.7

Q ss_pred             CcccChhhhcCC---C---C-C-----------ChhhHHhhhhc--c-ccccccccCcc------ccc-CCC---hHHHH
Q 035485           32 ELSPCASAITGA---N---A-P-----------SAICCSKLKEQ--R-ICLCQYMKDPN------LRK-FVN---SPNAR   80 (93)
Q Consensus        32 ~L~~C~~~v~~~---~---~-P-----------s~~CC~~v~~~--~-~C~C~~ik~~~------~~~-~~~---~~~a~   80 (93)
                      .|.+|..||.-.   .   + +           -..||+-|+..  + .|.|..|+...      +.. -..   ...|.
T Consensus        24 qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A~  103 (127)
T 1w2q_A           24 NLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELM  103 (127)
T ss_dssp             CCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            589999999731   1   1 1           25799999987  6 99999987422      111 011   24499


Q ss_pred             HhhcccCCCCC
Q 035485           81 KVATVCGSPFP   91 (93)
Q Consensus        81 ~Lp~~Cgv~~p   91 (93)
                      .||..||++-|
T Consensus       104 ~LP~~C~i~~~  114 (127)
T 1w2q_A          104 SLPQQCNFRAP  114 (127)
T ss_dssp             HHHHHHTCCCS
T ss_pred             HhHHhcCCCCC
Confidence            99999999433

>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3

Probab=81.36  E-value=0.27  Score=31.39  Aligned_cols=57  Identities=26%  Similarity=0.591  Sum_probs=39.4

Q ss_pred             CcccChhhhcCC---C--------CC-------C----hhhHHhhhhcc-ccccccccCcc--------ccc-CC--ChH
Q 035485           32 ELSPCASAITGA---N--------AP-------S----AICCSKLKEQR-ICLCQYMKDPN--------LRK-FV--NSP   77 (93)
Q Consensus        32 ~L~~C~~~v~~~---~--------~P-------s----~~CC~~v~~~~-~C~C~~ik~~~--------~~~-~~--~~~   77 (93)
                      .|.+|..||...   .        .|       .    ..||+-|+..+ .|.|..|+...        +.. -.  ...
T Consensus        26 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~~gqq~~~~~q  105 (125)
T 1psy_A           26 DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ  105 (125)
T ss_dssp             TTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHH
T ss_pred             hHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            689999999731   0        13       1    57999999976 99999986421        111 01  234


Q ss_pred             HHHHhhcccCC
Q 035485           78 NARKVATVCGS   88 (93)
Q Consensus        78 ~a~~Lp~~Cgv   88 (93)
                      .|..||..||+
T Consensus       106 ~A~~LP~~C~i  116 (125)
T 1psy_A          106 RAGEIVSSCGV  116 (125)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHhhHHHcCC
Confidence            48999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	93
d1l6ha_	69	a.52.1.1 (A:) Non-specific lipid-transfer protein	1e-27
d1tuka1	67	a.52.1.1 (A:1-67) Non-specific lipid-transfer prot	3e-27

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]} Length = 69

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

 Score = 93.7 bits (233), Expect = 1e-27
 Identities = 32/67 (47%), Positives = 41/67 (61%)

Query: 27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVC 86
           CN  +L+ C  AI G   P+A CCS L+ Q+ C CQ+ KDP   ++VNSPNARK  + C
Sbjct: 2  GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSC 61

Query: 87 GSPFPRC 93
          G   P C
Sbjct: 62 GIALPTC 68

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]} Length = 67

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

 Score = 92.5 bits (230), Expect = 3e-27
 Identities = 29/66 (43%), Positives = 37/66 (56%)

Query: 28 CNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCG 87
          C   +L+ CASAI     PS  CC  L+ Q+ C CQY KDP   +++ SP+AR   T CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCG 61

Query: 88 SPFPRC 93
             P C
Sbjct: 62 LAVPHC 67

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.84
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.82
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.55
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.53
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	92.64
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	90.79
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	87.51
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	85.16

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.84  E-value=2.4e-22  Score=116.90  Aligned_cols=67  Identities=43%  Similarity=0.947  Sum_probs=64.1

Q ss_pred             ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485           27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC   93 (93)
Q Consensus        27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C   93 (93)
                      .|+..+|+||++.++++++||.+||+.+|+|+.|+|+|+|+|.++.|+++++|.++.+.||+++|+|
T Consensus         1 aC~p~~L~~C~~Ai~~g~~PS~~CC~kLkeQ~~ClC~Y~kdP~~~~yv~spnarkv~~aCgvp~P~C   67 (67)
T d1tuka1           1 ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC   67 (67)
T ss_dssp             CCCGGGGGGGHHHHHHCCCCCHHHHHHHHHHGGGHHHHTTCTTTHHHHTSHHHHHHHHHTTCCCCCC
T ss_pred             CCChhhccccHHHHhcCCCCcHHHHHHHHhcCCccceecCCccHHHHcCCHHHHHHHHhcCCCCCCC
Confidence            3777789999999999999999999999999999999999999999999999999999999999998

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.82  E-value=2.9e-22  Score=117.18  Aligned_cols=67  Identities=48%  Similarity=1.032  Sum_probs=64.5

Q ss_pred             ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485           27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC   93 (93)
Q Consensus        27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C   93 (93)
                      .|+..+|.||++.++++.+||.+||+.+|+|+.|+|+|+|+|.++.|+++++|.++.+.||+++|+|
T Consensus         2 ~C~p~~L~~C~~ai~~g~~PS~~CC~kLkeQ~~ClC~Y~k~P~~~~yv~spnarkv~~aCgvp~P~C   68 (69)
T d1l6ha_           2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC   68 (69)
T ss_dssp             CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCC
T ss_pred             CCChhhccccHHHHhCCCCCcHHHHHHHHhcCCccceeccCccHHHHcCCHHHHHHHHhcCCCCCCC
Confidence            5887899999999999999999999999999999999999999999999999999999999999998

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.55  E-value=1.9e-16  Score=96.85  Aligned_cols=66  Identities=24%  Similarity=0.619  Sum_probs=54.0

Q ss_pred             cccCc--CCcccChhhhcCCCCCChhhHHhhhhc---------cccccccccCcccc-cCCChHHHHHhhcccCCCCC
Q 035485           26 MTCNP--LELSPCASAITGANAPSAICCSKLKEQ---------RICLCQYMKDPNLR-KFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~~---------~~C~C~~ik~~~~~-~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      ++|++  ..|.||++|+++++.|++.||+++++.         ++|+|+++|+.... ..+|.++|.+||++||+++|
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCCCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHHHHHhchHhcCCCCC
Confidence            46776  478999999998889999999999971         26999999863222 24899999999999999876

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.53  E-value=2.9e-16  Score=96.28  Aligned_cols=67  Identities=31%  Similarity=0.665  Sum_probs=54.5

Q ss_pred             ccccCc--CCcccChhhhcCCC-CCChhhHHhhhhc---------cccccccccCcccc-cCCChHHHHHhhcccCCCCC
Q 035485           25 AMTCNP--LELSPCASAITGAN-APSAICCSKLKEQ---------RICLCQYMKDPNLR-KFVNSPNARKVATVCGSPFP   91 (93)
Q Consensus        25 ~~~C~~--~~L~~C~~~v~~~~-~Ps~~CC~~v~~~---------~~C~C~~ik~~~~~-~~~~~~~a~~Lp~~Cgv~~p   91 (93)
                      +++|.+  ..|.||++||++++ .|++.||+++++.         ++|+|+++|+.... ..+|.+++.+||++||+++|
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~l~   80 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP   80 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCCCS
T ss_pred             CCCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHHHHHhhhHhcCCCCC
Confidence            478887  47899999999866 7999999999971         26888889863222 24899999999999999876

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=92.64  E-value=0.018  Score=34.50  Aligned_cols=62  Identities=18%  Similarity=0.396  Sum_probs=42.5

Q ss_pred             CcccChhhhcC-----CC-C-------CChhhHHhhhhcc-ccccccccCc---cccc-C--CChHHHHHhhcccCCCCC
Q 035485           32 ELSPCASAITG-----AN-A-------PSAICCSKLKEQR-ICLCQYMKDP---NLRK-F--VNSPNARKVATVCGSPFP   91 (93)
Q Consensus        32 ~L~~C~~~v~~-----~~-~-------Ps~~CC~~v~~~~-~C~C~~ik~~---~~~~-~--~~~~~a~~Lp~~Cgv~~p   91 (93)
                      .|..|..||..     +. .       -=..||+-++..+ .|.|.-|+..   .... .  -....|.+||+.||+..-
T Consensus        20 ~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~~~~CrC~~L~~avq~q~~q~~~~~~~q~Ak~LPs~C~i~P~   99 (103)
T d1s6da_          20 MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQ   99 (103)
T ss_dssp             STTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSSSS
T ss_pred             hHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHhHHHHHHHHHHHHhChHhcCCCCc
Confidence            68999999963     11 1       1157999999977 9999888642   1111 1  123459999999999844


Q ss_pred             CC
Q 035485           92 RC   93 (93)
Q Consensus        92 ~C   93 (93)
                      .|
T Consensus       100 ~C  101 (103)
T d1s6da_         100 PC  101 (103)
T ss_dssp             CS
T ss_pred             cC
Confidence            55

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=90.79  E-value=0.075  Score=32.55  Aligned_cols=60  Identities=23%  Similarity=0.500  Sum_probs=41.4

Q ss_pred             CcccChhhhcCC-----C-CC-----C-----------hhhHHhhhhcc-ccccccccCcc--------cccC-C--ChH
Q 035485           32 ELSPCASAITGA-----N-AP-----S-----------AICCSKLKEQR-ICLCQYMKDPN--------LRKF-V--NSP   77 (93)
Q Consensus        32 ~L~~C~~~v~~~-----~-~P-----s-----------~~CC~~v~~~~-~C~C~~ik~~~--------~~~~-~--~~~   77 (93)
                      .|..|..||...     + .+     .           ..||+-|+..+ .|.|.-|+...        +... +  ...
T Consensus        26 ~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~~~~CrC~~l~~~v~~~~qq~~~~~~~~~~~~q  105 (125)
T d1psya_          26 DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ  105 (125)
T ss_dssp             TTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhCCcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            699999999731     1 11     0           36999999977 99999886410        1110 1  235


Q ss_pred             HHHHhhcccCCCCC
Q 035485           78 NARKVATVCGSPFP   91 (93)
Q Consensus        78 ~a~~Lp~~Cgv~~p   91 (93)
                      .|..||+.||+...
T Consensus       106 ~Ak~LPs~C~i~~~  119 (125)
T d1psya_         106 RAGEIVSSCGVRCM  119 (125)
T ss_dssp             HHHHHHHHHTCSTT
T ss_pred             HHHhChhhcCCcch
Confidence            59999999999754

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=85.16  E-value=0.18  Score=28.25  Aligned_cols=57  Identities=25%  Similarity=0.633  Sum_probs=39.8

Q ss_pred             CcccChhhhcCCCCCChhhHHhhhh-----ccccccccccCcccccCCChHH-HHHhhcccCCCCC
Q 035485           32 ELSPCASAITGANAPSAICCSKLKE-----QRICLCQYMKDPNLRKFVNSPN-ARKVATVCGSPFP   91 (93)
Q Consensus        32 ~L~~C~~~v~~~~~Ps~~CC~~v~~-----~~~C~C~~ik~~~~~~~~~~~~-a~~Lp~~Cgv~~p   91 (93)
                      .+.-|..-+.+.-++...||.-+++     ...|+|-.+|.  .. .+|.+- ..-|-..||...|
T Consensus         5 Klg~C~nvLg~~~~~~~~CC~Ll~GL~dleAAvCLCtaika--~~-llnvpv~l~llln~Cgk~~P   67 (75)
T d1hypa_           5 DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA--LG-ILNLNRNLQLILNSCGRSYP   67 (75)
T ss_dssp             CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH--HT-CSCHHHHHHHHHHHTTCSSC
T ss_pred             chhhHHHHhcCccCCCCCcchHHhhHHHHHHHHHHHHHHHH--hh-hccccchHHHHHHHcCCcCc
Confidence            5667877665444667889999998     33999988873  22 256664 4446668999887