Citrus Sinensis ID: 035544

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------
MSDPLLAEAPPPSNDFDALSIPPLDPPYLNSQIPHPCASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFLPSEDPQDGEFGGFSPGVDGGAAAASPGSGSSGILGNPASLDVESYLNYSSSPQNSGNRISHLNSIGISGGRSENSGSGVSSDNTDAPSPDSGNLVVDQKIKMEEVSKKGIFKRKKDIEETNNESRNNKYRKSSSLSVNEADNDHNLGEEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAMPPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLKPQAAAAAVPSRTKKSDGNKSKSDGSKTKKVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCARAVESKEKESQPAPDSDEFVRPRNASEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLAIPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANMTAEHRQNATQVNRGRNRRILHRLPVPLTNITGERKVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGLHLVTS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccEEEcccEEEEEEEccHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHccccccccccHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccEEEEEEEEccEEEEEEEEEccccccccccc
ccccHHcccccccccccccccccccccccccccccccccHHHHHHHccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccHcccccccccccHHcccEEEcccccEcccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccHEHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEcccEEEEEEEEcHHHHcccccccccccccccEEccccccccccccccccccccccccccccHHHccccccccccccHccccccccccccHHHHHHHcccccccccccEEEEEEEcccccccEEEccccccccHHHcccccccccccccEHHcccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccEEEEEEEEccEEEEEEEcccccccccEEcc
msdpllaeapppsndfdalsippldppylnsqiphpcassddldfvlddncdfdftiddlyfaseddtfflpsedpqdgefggfspgvdggaaaaspgsgssgilgnpasldvesylnyssspqnsgnrishlnsigisggrsensgsgvssdntdapspdsgnlvvdqKIKMEEVSKKGIFKRKKDIEEtnnesrnnkyrkssslsvneadndhnlgEEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLkqqlsgsnamppplgmypppphmaaapmpygwmpcaapymvkpqgsqvplvpiprlkpqaaaaavpsrtkksdgnksksdgsktkkVASVSFLGLLFFILLFGglvplvdvkyggirdgvsggyfssgfynqhRGRVLTIngysngsgesmgigfpngrvgfdnriHCARAVeskekesqpapdsdefvrprnaseplvaslyvprndklvkidgnlIIHSVLASEKAmashdaskanskeatglaipkdfspalaipdvrgngarhshfyrnpaERQRAISSGSTDALKDHMKSSAANGKLQQWFqeglsgpllssgmctevfqfdaspapgaiipassvanMTAEHRQNATqvnrgrnrrilhrlpvpltnitgerkvqkesfagnksASSMVVSVLvdpretgdgdvegmispksLSRIFVVVLLDSVKYvtyscglprsglhlvts
msdpllaeapppsnDFDALSIPPLDPPYLNSQIPHPCASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFLPSEDPQDGEFGGFSPGVDGGAAAASPGSGSSGILGNPASLDVESYLNYSSSPQNSGNRISHLNSIGISGGRSENSGSGVssdntdapspdsgnlvvdqkikmeevskkgifkrkkdieetnnesrnnkyrkssslsvneadndhnlgeeEMKRKARLMRnresaqlsrqrkkHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAMPPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLKPQaaaaavpsrtkksdgnksksdgsktkKVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCARAveskekesqpapdsdefvrprnaseplvaslyvprndklVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLAIPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANMTAEHRQNatqvnrgrnrrilhrlpvpltnitgerkvqkesfagnksassmVVSVLVdpretgdgdvegmispkslSRIFVVVLLDSVKYvtyscglprsglhlvts
MSDPLLAEAPPPSNDFDALSIPPLDPPYLNSQIPHPCASSddldfvlddncdfdftiddLYFASEDDTFFLPSEDPQDGEFGGFSPGVDggaaaaspgsgssgILGNPASLDVESYLNYSSSPQNSGNRISHLNSIGISGGRSENSGSGVSSDNTDAPSPDSGNLVVDQKIKMEEVSKKGIFKRKKDIEETNNESRNNKYRKSSSLSVNEADNDHNLGEEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAmppplgmypppphmaaapmpyGWMPCAAPYMVKPQGSQVPLVPIPRLKPQAAAAAVPSRtkksdgnksksdgsktkkVASVSflgllffillfgglVPLVDVKYGGIRDGVsggyfssgfyNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCARAVESKEKESQPAPDSDEFVRPRNASEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLAIPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDaspapgaiipassvaNMTAEHRQNATQVNRGRNRRILHRLPVPLTNITGERKVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGLHLVTS
************************************CASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFL***************************************************************************************************************************************************************************************************ISFF***********************************PYGWMPCAAPYMVK*********************************************ASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCAR***************************LVASLYVPRNDKLVKIDGNLIIHSVLA*******************************************************************************QWFQEGLSGPLLSSGMCTEVFQFDA**********************************ILHRLPV************************************************SLSRIFVVVLLDSVKYVTYSCGLPRSGLH****
****************************************************************************************************************************************************************************************************************************************E*****RQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLK******************************************************************************************FLGLLFFILLFGGLVPLVDVKYGG**************YNQHRGRVLTINGYS*****************************************************LVASLYVPRNDKLVKIDGNLIIHSVL*************************KDFSPALA***********************************************QWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPAS**********************RILHRLPV**************************VSVLVDPRETGD*****MISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGLHL***
***********PSNDFDALSIPPLDPPYLNSQIPHPCASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFLPSEDPQDGEFGGFSPGVDGG*********SSGILGNPASLDVESYLN*********NRISHLNSIGISG**********************GNLVVDQKIKMEEVSKKGIFKRKKDIEE*********************DNDHNLGEEEMKR*******************HYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAMPPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLK****************************KVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCARAV****************VRPRNASEPLVASLYVPRNDKLVKIDGNLIIHSVLAS****************ATGLAIPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANMTAEHRQNATQVNRGRNRRILHRLPVPLTNITGERKVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGLHLVTS
************SNDFDALSIPPLDPPYLNSQIPHPCASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFLPSE**********************************A*L*V*************************************************GNLVVDQKIKMEE*************************************************************LSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAMPPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLKP*************************TKKVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYS************************************************NASEPLVASLYVPRNDKLVKIDGNLIIHSVLASEK*M**************GLAIPKDFSPALAIPDV*************************T******MKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANM*************GRNRRILHRLPVPLT********************SMVVSVLVDPRET******GMISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGL*L***
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MSDPLLAEAPPPSNDFDALSIPPLDPPYLNSQIPHPCASSDDLDFVLDDNCDFDFTIDDLYFASEDDTFFLPSEDPQDGEFGGFSPGVDGGAAAASPGSGSSGILGNPASLDVESYLNYSSSPQNSGNRISHLNSIGISGGRSENSGSGVSSDNTDAPSPDSGNLVVDQKIKMEEVSKKGIFKRKKDIEETNNESRNNKYRKSSSLSVNEADNDHNLGEEEMKRKARLMRNRESAQLSRQRKKHYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLSGSNAMPPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLKPQAAAAAVPSRTKKSDGNKSKSDGSKTKKVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFYNQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCARAVESKEKESQPAPDSDEFVRPRNASEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLAIPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANMTAEHRQNATQVNRGRNRRILHRLPVPLTNITGERKVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMISPKSLSRIFVVVLLDSVKYVTYSCGLPRSGLHLVTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query727 2.2.26 [Sep-21-2011]
P14233242 TGACG-sequence-specific D N/A no 0.151 0.454 0.532 1e-24
Q54WN7631 Probable basic-leucine zi yes no 0.097 0.112 0.388 5e-08
Q554P0787 Probable basic-leucine zi no no 0.086 0.080 0.412 1e-06
Q54RZ9372 Probable basic-leucine zi no no 0.086 0.169 0.428 2e-06
O24646168 Transcription factor HY5 no no 0.138 0.601 0.297 2e-06
Q1XGE2345 Transcriptional activator yes no 0.138 0.292 0.333 1e-05
Q9SM50158 Transcription factor HY5 N/A no 0.094 0.436 0.391 2e-05
Q54Y73834 Probable basic-leucine zi no no 0.067 0.058 0.444 4e-05
Q6S4P4329 Transcription factor RF2b no no 0.083 0.185 0.367 0.0002
Q8SQ19368 Cyclic AMP-responsive ele yes no 0.099 0.195 0.375 0.0002
>sp|P14233|TGA1B_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment) OS=Nicotiana tabacum GN=TGA1B PE=2 SV=1 Back     alignment and function desciption
 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 92/122 (75%), Gaps = 12/122 (9%)

Query: 164 NLVVDQKIKMEEVSKK-----GIFKRKKDIEETNNESRNNKYRKSSSLSVNEADNDHNLG 218
           N  V++KIK+E V+        + KRKK  E++NN    N ++K +++++  +DN +N  
Sbjct: 128 NGAVEEKIKLEGVNANISKCSSLLKRKKSSEDSNNI---NIHQKLTNVAL--SDNVNN-- 180

Query: 219 EEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLK 278
           +E+ K++ARL+RNRESAQLSRQRKKHYVEELEDKVR MHSTI DLN+K+++ +AENA+LK
Sbjct: 181 DEDEKKRARLVRNRESAQLSRQRKKHYVEELEDKVRIMHSTIQDLNAKVAYIIAENATLK 240

Query: 279 QQ 280
            Q
Sbjct: 241 TQ 242
Binds specifically to the DNA sequence 5'-TGACG-3'.
Nicotiana tabacum (taxid: 4097)
>sp|Q54WN7|BZPF_DICDI Probable basic-leucine zipper transcription factor F OS=Dictyostelium discoideum GN=bzpF PE=3 SV=1 Back     alignment and function description
>sp|Q554P0|BZPJ_DICDI Probable basic-leucine zipper transcription factor J OS=Dictyostelium discoideum GN=bzpJ PE=3 SV=1 Back     alignment and function description
>sp|Q54RZ9|BZPG_DICDI Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum GN=bzpG PE=3 SV=1 Back     alignment and function description
>sp|O24646|HY5_ARATH Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1 Back     alignment and function description
>sp|Q1XGE2|HAC1_ASPOR Transcriptional activator hacA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=hacA PE=2 SV=1 Back     alignment and function description
>sp|Q9SM50|HY5_SOLLC Transcription factor HY5 OS=Solanum lycopersicum GN=HY5 PE=2 SV=1 Back     alignment and function description
>sp|Q54Y73|BZPD_DICDI Probable basic-leucine zipper transcription factor D OS=Dictyostelium discoideum GN=bzpD PE=3 SV=1 Back     alignment and function description
>sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=1 Back     alignment and function description
>sp|Q8SQ19|CREB3_BOVIN Cyclic AMP-responsive element-binding protein 3 OS=Bos taurus GN=CREB3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query727
255570484702 transcription factor hy5, putative [Rici 0.933 0.967 0.558 0.0
359481568768 PREDICTED: uncharacterized protein LOC10 0.946 0.895 0.512 0.0
357509235765 Transcription factor bZIP37 [Medicago tr 0.741 0.704 0.605 1e-173
449437688768 PREDICTED: uncharacterized protein LOC10 0.931 0.881 0.498 1e-171
356504651775 PREDICTED: uncharacterized protein LOC10 0.950 0.891 0.498 1e-169
356571890728 PREDICTED: uncharacterized protein LOC10 0.932 0.931 0.506 1e-169
224139674623 predicted protein [Populus trichocarpa] 0.636 0.743 0.640 1e-169
297741685680 unnamed protein product [Vitis vinifera] 0.880 0.941 0.509 1e-169
297827737724 bZIP transcription factor family protein 0.942 0.946 0.509 1e-161
18405556721 basic helix-loop-helix domain-containing 0.921 0.929 0.498 1e-152
>gi|255570484|ref|XP_002526200.1| transcription factor hy5, putative [Ricinus communis] gi|223534478|gb|EEF36179.1| transcription factor hy5, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/750 (55%), Positives = 513/750 (68%), Gaps = 71/750 (9%)

Query: 1   MSDPLLAEAPP------PSNDFDALSIPPLDPPYLNSQIPHPCAS-SDDLDFVLDDNCDF 53
           M D +L++ PP       ++DFD+L+IPPLDP +L+ Q      +   DL F LDDN DF
Sbjct: 1   MGDAILSDHPPLDSSNYSTDDFDSLAIPPLDPMFLSEQSSGENYNLVSDLQFSLDDNYDF 60

Query: 54  DFTIDDLYFASEDDTFFLPSEDPQDGEFGGFSPGVDGGAAAASPGSGSSGILGNPASLDV 113
           D T DDL        F LPS++  D     FS  +D    +ASP  G SG         V
Sbjct: 61  DITFDDLV------DFNLPSDNDHDHGHDRFS--ID--PKSASPELGISG------DHHV 104

Query: 114 ESYLNYSSSPQNSGNRISHLNSIGISGGRSENSGSGVSSDNTDAPSPDSGNLVVDQKIKM 173
            +YLN S S  NS    S  + + +S   S        S  +D+      N VVDQK+K+
Sbjct: 105 ATYLNSSPSASNSTTTCSSGDQLNVSSPVSSQGSGNGGSGVSDSV-----NFVVDQKVKL 159

Query: 174 EE-----VSKKG-IFKRKKDIEETNNESRNNKYRKSSSLSVNEADNDHNLGEEEMKRKAR 227
           EE      +K G + KRKK  E  + ++RN KYR+S     N   N   + +E+ KRKAR
Sbjct: 160 EEEGSNSKNKNGSLSKRKK--ENGSEDTRNQKYRRSE----NSNANTQCVSDEDEKRKAR 213

Query: 228 LMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAM 287
           LMRNRESAQLSRQRKKHYVEELEDKV+ MHSTIADLNSKISFFMAENA+L+QQLSG N M
Sbjct: 214 LMRNRESAQLSRQRKKHYVEELEDKVKTMHSTIADLNSKISFFMAENATLRQQLSGGNGM 273

Query: 288 PPPLGMYPPPPHMAAAPMPYGWMPCAAPYMVKPQGSQVPLVPIPRLKPQAAAAAVPSRTK 347
            PP            APMPY W+PCA PY+VK QGSQVPLVPIPRLK Q   +A  +++K
Sbjct: 274 CPP---------PMYAPMPYPWVPCA-PYVVKAQGSQVPLVPIPRLKSQQPVSA--AKSK 321

Query: 348 KSDGNKSKSDGSKTKKVASVSFLGLLFFILLFGGLVPLVDVKYGGIRDGVSGGYFSSGFY 407
           KSD  K++    KTKKVASVSFLGLLFF+LLFGGLVP+V+VK+GG+ +  + G+ S  FY
Sbjct: 322 KSDPKKAEG---KTKKVASVSFLGLLFFVLLFGGLVPIVNVKFGGVGENGANGFVSDKFY 378

Query: 408 NQHRGRVLTINGYSNGSGESMGIGFPNGRVGFDNRIHCAR----AVESKEKESQPAPDSD 463
           N+HRGRVL ++G+SNGS E++ +GF  G      RI C       +  K+   +  P++D
Sbjct: 379 NRHRGRVLRVDGHSNGSHENVDVGFSTGDFDSCFRIQCGSGRNGCLAEKKGRLEHLPEAD 438

Query: 464 EFVRPRNASEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLA 523
           E VR  N S+PL ASLYVPRNDKLVKIDGNLIIHSVLASE+AM+S++  +AN  + TGLA
Sbjct: 439 ELVRRGNNSKPLAASLYVPRNDKLVKIDGNLIIHSVLASERAMSSNENPEANKSKETGLA 498

Query: 524 IPKDFSPALAIPDVRGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWF 583
           IP+D SP+  IP       R+SH Y +  ERQ+A++SGS+D L DH KS+AA+GKLQQWF
Sbjct: 499 IPRDLSPSPTIP------GRYSHLYGHHNERQKALTSGSSDTLNDHKKSAAADGKLQQWF 552

Query: 584 QEGLSGPLLSSGMCTEVFQFDASPAPGAIIPASSVANMTAEHRQNATQVNRGRNRRILHR 643
            EGL+GPLLSSGMC+EVFQFDA P PGAIIPASSV+N+TAE +QNAT   +G+NRRILH 
Sbjct: 553 HEGLAGPLLSSGMCSEVFQFDALPTPGAIIPASSVSNITAEGQQNATNHKKGKNRRILHG 612

Query: 644 LPVPLT----NITGER--KVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMISPKSLS 697
           LP+PLT    NITGE     QKE+F GNKS S MVVSVLVDPRE GD +V+G+I+PKS+S
Sbjct: 613 LPIPLTGSDLNITGEHVGNSQKENFQGNKSVSPMVVSVLVDPREAGDIEVDGVIAPKSIS 672

Query: 698 RIFVVVLLDSVKYVTYSCGLPRSGLHLVTS 727
           RIFVVVLLDSVKYVTYSC LPRSG  LVT+
Sbjct: 673 RIFVVVLLDSVKYVTYSCVLPRSGPQLVTT 702

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359481568|ref|XP_002277884.2| PREDICTED: uncharacterized protein LOC100248184 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357509235|ref|XP_003624906.1| Transcription factor bZIP37 [Medicago truncatula] gi|124361217|gb|ABN09189.1| cAMP response element binding (CREB) protein [Medicago truncatula] gi|355499921|gb|AES81124.1| Transcription factor bZIP37 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449437688|ref|XP_004136623.1| PREDICTED: uncharacterized protein LOC101215342 [Cucumis sativus] gi|449521537|ref|XP_004167786.1| PREDICTED: uncharacterized protein LOC101224129 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356504651|ref|XP_003521109.1| PREDICTED: uncharacterized protein LOC100101871 [Glycine max] Back     alignment and taxonomy information
>gi|356571890|ref|XP_003554104.1| PREDICTED: uncharacterized protein LOC100127362 [Glycine max] Back     alignment and taxonomy information
>gi|224139674|ref|XP_002323223.1| predicted protein [Populus trichocarpa] gi|222867853|gb|EEF04984.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297741685|emb|CBI32817.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297827737|ref|XP_002881751.1| bZIP transcription factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297327590|gb|EFH58010.1| bZIP transcription factor family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18405556|ref|NP_565946.1| basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] gi|20196934|gb|AAB86455.2| bZIP family transcription factor [Arabidopsis thaliana] gi|330254811|gb|AEC09905.1| basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query727
TAIR|locus:2058510721 BZIP17 "AT2G40950" [Arabidopsi 0.938 0.945 0.453 2.4e-138
TAIR|locus:2102564620 BZIP49 "AT3G56660" [Arabidopsi 0.378 0.443 0.478 3.8e-91
TAIR|locus:2103192675 BZIP28 "AT3G10800" [Arabidopsi 0.526 0.567 0.420 7.6e-71
DICTYBASE|DDB_G0279529631 bzpF "putative basic-leucine z 0.204 0.236 0.307 4.2e-09
TAIR|locus:2148007168 HY5 "ELONGATED HYPOCOTYL 5" [A 0.180 0.779 0.282 6.6e-09
DICTYBASE|DDB_G0282749372 bzpG "putative basic-leucine z 0.221 0.432 0.254 2.5e-08
TAIR|locus:1005716533149 HYH "AT3G17609" [Arabidopsis t 0.178 0.872 0.284 1.2e-06
TAIR|locus:2009874295 BZIP60 "AT1G42990" [Arabidopsi 0.173 0.427 0.292 4.1e-06
DICTYBASE|DDB_G0274993787 bzpJ "putative basic-leucine z 0.177 0.163 0.300 1.3e-05
DICTYBASE|DDB_G0269338418 bzpE "putative basic-leucine z 0.133 0.232 0.316 6.1e-05
TAIR|locus:2058510 BZIP17 "AT2G40950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
 Identities = 334/736 (45%), Positives = 427/736 (58%)

Query:    10 PPPSNDFDALSIPPLDPPYLNSQIPHPCASSXXXXXXXXXXXXXXXXXXXLYFASEDDTF 69
             PPPS DFD++SIPPLD  + + Q P     S                   LYF +E+++F
Sbjct:    22 PPPS-DFDSISIPPLDD-HFSDQTPIGELMSDLGFPDGEFELTFDGMDD-LYFPAENESF 78

Query:    70 FLPSEDPQDGEFGGFSPGVDXXXXXXXXXXXXXXILGNPASLDVESYLNYSSSPQNSGNR 129
              +P       +FG F+P  +                    ++     +N   SP++S +R
Sbjct:    79 LIPINTSNQEQFGDFTPESESSGISGDCIVPKDA----DKTITTSGCIN-RESPRDSDDR 133

Query:   130 IS---HLNSIG--ISGGRSENSGSGVSSDNTDAPSPDSGNLVVDQKIKMEEVSKK--GIF 182
              S   H   +   +S   S N GS VS + T+  SP S N+ VDQK+K+EE +     I 
Sbjct:   134 CSGADHNLDLPTPLSSQGSGNCGSDVS-EATNESSPKSRNVAVDQKVKVEEAATTTTSIT 192

Query:   183 KRKKDIEET-NNESRNNKYRKSSSLSVNEADNDHNLGEEEMKRKARLMRNRESAQLSRQR 241
             KRKK+I+E   +ESRN+KYR+S      +AD     GEE+ K++ARLMRNRESAQLSRQR
Sbjct:   193 KRKKEIDEDLTDESRNSKYRRSGE----DADASAVTGEEDEKKRARLMRNRESAQLSRQR 248

Query:   242 KKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLSGSNAXXXXXXXXXXXXXXX 301
             KKHYVEELE+KVRNMHSTI DLN KIS+FMAENA+L+QQL G+                 
Sbjct:   249 KKHYVEELEEKVRNMHSTITDLNGKISYFMAENATLRQQLGGNGMCPPHLPPPPMGMYPP 308

Query:   302 XXXXXXGWMPCAAPYMVKPQGSQVPLVPIPRLKPQAAAAAVPSRXXXXXXXXXXXXXXXX 361
                    WMPC  PYMVK QGSQVPL+PIPRLKPQ       ++                
Sbjct:   309 MAPMPYPWMPCP-PYMVKQQGSQVPLIPIPRLKPQNTLGTSKAKKSESKKSEAKTKK--- 364

Query:   362 XXVASVSXXXXXXXXXXXXXXVPLVDVKYGGIRDGVXXXXXXXXXXNQ----HRGRVLTI 417
               VAS+S               P+V+V YGGI              +Q    HR RVL  
Sbjct:   365 --VASISFLGLLFCLFLFGALAPIVNVNYGGISGAFYGNYRSNYITDQIYSQHRDRVLD- 421

Query:   418 NGYSNGSGESMGIGFPNGRVGFDNRIHCARAVESKEKESQPAPDSDEFVRPRNASEPLVA 477
                ++ SG   G+   NG       +H  R  +   +++  A +S   V P N SEPLVA
Sbjct:   422 ---TSRSGAGTGVSNSNG-------MHRGRDSDRGARKNISATESS--VTPGNGSEPLVA 469

Query:   478 SLYVPRNDKLVKIDGNLIIHSVLASEKAMASHDASKANSKEATGLAIPKDFSPALAIPDV 537
             SL+VPRNDKLVKIDGNLII+S+LASEKA+AS  AS++  ++A  L I KD++PAL +PDV
Sbjct:   470 SLFVPRNDKLVKIDGNLIINSILASEKAVASRKASESKERKAD-LMISKDYTPALPLPDV 528

Query:   538 RGNGARHSHFYRNPAERQRAISSGSTDALKDHMKSSAANGKLQQWFQEGLSGPLLSSGMC 597
                     H YR+ AE+Q+A+SSGS D LKD +K+ AANG++QQWF+EG++GP+ SSGMC
Sbjct:   529 GRTEELAKHLYRSKAEKQKALSSGSADTLKDQVKTKAANGEMQQWFREGVAGPMFSSGMC 588

Query:   598 TEVFQFDXXXXXXXXXXXXXXXNMTAEHRQNATQVNRGRNRRILHRLPVPLT----NITG 653
             TEVFQFD               N++AEH +N T  ++ +NRRIL  LP+PL     N+T 
Sbjct:   589 TEVFQFDVSSTSGAIIPAAT--NVSAEHGKNTTDTHKQQNRRILRGLPIPLPGSDFNLTK 646

Query:   654 ERKVQKESFAGNKSASSMVVSVLVDPRETGDGDVEGMIS-PKSLSRIFVVVLLDSVKYVT 712
             E + +  S    K ASSMVVSVLVDPRE GDGD++GMI  PKSLSR+FVVVLLDS KYVT
Sbjct:   647 EHQ-RNSSSKEIKPASSMVVSVLVDPREGGDGDIDGMIGGPKSLSRVFVVVLLDSAKYVT 705

Query:   713 YSCGLPRSGL-HLVTS 727
             YSC LPRSG  HLVT+
Sbjct:   706 YSCVLPRSGAPHLVTT 721
GO:0003677 "DNA binding" evidence=ISS
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IDA
GO:0043565 "sequence-specific DNA binding" evidence=IEA
GO:0046983 "protein dimerization activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0042538 "hyperosmotic salinity response" evidence=IMP
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA
TAIR|locus:2102564 BZIP49 "AT3G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103192 BZIP28 "AT3G10800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279529 bzpF "putative basic-leucine zipper (bZIP) transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2148007 HY5 "ELONGATED HYPOCOTYL 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0282749 bzpG "putative basic-leucine zipper (bZIP) transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:1005716533 HYH "AT3G17609" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009874 BZIP60 "AT1G42990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0274993 bzpJ "putative basic-leucine zipper (bZIP) transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269338 bzpE "putative basic-leucine zipper (bZIP) transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query727
smart0033865 smart00338, BRLZ, basic region leucin zipper 3e-18
pfam0017064 pfam00170, bZIP_1, bZIP transcription factor 3e-12
pfam0771654 pfam07716, bZIP_2, Basic region leucine zipper 2e-07
cd1219354 cd12193, B_zip1, basic leucine zipper DNA-binding 8e-07
>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper Back     alignment and domain information 
 Score = 79.1 bits (196), Expect = 3e-18
 Identities = 27/64 (42%), Positives = 37/64 (57%)

Query: 219 EEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLK 278
           EE+ KR+ R  RNRE+A+ SR+RKK  +EELE KV  + +    L  +I     E   LK
Sbjct: 1   EEDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKLK 60

Query: 279 QQLS 282
            +L 
Sbjct: 61  SELE 64

Length = 65
>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor Back     alignment and domain information
>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper Back     alignment and domain information
>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 727
smart0033865 BRLZ basic region leucin zipper. 99.44
PF0017064 bZIP_1: bZIP transcription factor cAMP response el 99.35
KOG3584348 consensus cAMP response element binding protein an 99.15
KOG0709472 consensus CREB/ATF family transcription factor [Tr 99.15
KOG4343655 consensus bZIP transcription factor ATF6 [Transcri 99.14
PF0771654 bZIP_2: Basic region leucine zipper; InterPro: IPR 99.07
KOG4005292 consensus Transcription factor XBP-1 [Transcriptio 98.75
KOG0837279 consensus Transcriptional activator of the JUN fam 98.51
KOG4571294 consensus Activating transcription factor 4 [Trans 98.2
PF0313192 bZIP_Maf: bZIP Maf transcription factor; InterPro: 98.07
KOG3119269 consensus Basic region leucine zipper transcriptio 97.97
KOG4196135 consensus bZIP transcription factor MafK [Transcri 97.35
KOG3863604 consensus bZIP transcription factor NRF1 [Transcri 97.16
KOG1414395 consensus Transcriptional activator FOSB/c-Fos and 96.62
KOG1414395 consensus Transcriptional activator FOSB/c-Fos and 96.03
PRK0029568 hypothetical protein; Provisional 93.15
PRK0073668 hypothetical protein; Provisional 93.02
PRK13729475 conjugal transfer pilus assembly protein TraB; Pro 92.92
PRK0279372 phi X174 lysis protein; Provisional 92.44
PRK0211973 hypothetical protein; Provisional 92.26
PRK0440675 hypothetical protein; Provisional 91.72
PRK0084677 hypothetical protein; Provisional 90.58
PRK10884206 SH3 domain-containing protein; Provisional 90.0
PF08172248 CASP_C: CASP C terminal; InterPro: IPR012955 This 89.63
KOG4797123 consensus Transcriptional regulator [Transcription 89.55
TIGR0244965 conserved hypothetical protein TIGR02449. Members 88.75
PF06156107 DUF972: Protein of unknown function (DUF972); Inte 87.99
KOG4005292 consensus Transcription factor XBP-1 [Transcriptio 87.68
PRK13922276 rod shape-determining protein MreC; Provisional 87.61
PF1280852 Mto2_bdg: Micro-tubular organiser Mto1 C-term Mto2 87.17
KOG3335181 consensus Predicted coiled-coil protein [General f 85.94
PF15058200 Speriolin_N: Speriolin N terminus 85.93
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 85.5
KOG3119269 consensus Basic region leucine zipper transcriptio 85.15
PF0410269 SlyX: SlyX; InterPro: IPR007236 The SlyX protein h 84.57
PF06156107 DUF972: Protein of unknown function (DUF972); Inte 84.03
PF0116659 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 83.94
PRK13169110 DNA replication intiation control protein YabA; Re 83.84
PRK0432574 hypothetical protein; Provisional 83.8
TIGR00219283 mreC rod shape-determining protein MreC. MreC (mur 83.18
KOG4343655 consensus bZIP transcription factor ATF6 [Transcri 83.11
PF08232134 Striatin: Striatin family; InterPro: IPR013258 Thi 82.76
PF0218345 HALZ: Homeobox associated leucine zipper; InterPro 82.66
PRK13169110 DNA replication intiation control protein YabA; Re 82.49
TIGR02894161 DNA_bind_RsfA transcription factor, RsfA family. I 81.69
PF11932251 DUF3450: Protein of unknown function (DUF3450); In 80.34
PF0410269 SlyX: SlyX; InterPro: IPR007236 The SlyX protein h 80.26
>smart00338 BRLZ basic region leucin zipper Back     alignment and domain information 
Probab=99.44  E-value=5e-13  Score=110.17  Aligned_cols=63  Identities=41%  Similarity=0.518  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 035544          220 EEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLS  282 (727)
Q Consensus       220 kEeKR~RRllRNRESAqrSRqRKKqYVeeLE~KVk~LEsENqeLr~qls~LqaEN~~LRqQL~  282 (727)
                      +++|+.+|+++||+||++||+||++|+.+||.++..|+.+|..|+.++..|+.|+..|++++.
T Consensus         2 ~~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~~~l~~e~~~lk~~~~   64 (65)
T smart00338        2 EDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKLKSELE   64 (65)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            356899999999999999999999999999999999999999999999999999999999875

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization Back     alignment and domain information
>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription] Back     alignment and domain information
>KOG0709 consensus CREB/ATF family transcription factor [Transcription] Back     alignment and domain information
>KOG4343 consensus bZIP transcription factor ATF6 [Transcription] Back     alignment and domain information
>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization Back     alignment and domain information
>KOG4005 consensus Transcription factor XBP-1 [Transcription] Back     alignment and domain information
>KOG0837 consensus Transcriptional activator of the JUN family [Transcription] Back     alignment and domain information
>KOG4571 consensus Activating transcription factor 4 [Transcription] Back     alignment and domain information
>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell Back     alignment and domain information
>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription] Back     alignment and domain information
>KOG4196 consensus bZIP transcription factor MafK [Transcription] Back     alignment and domain information
>KOG3863 consensus bZIP transcription factor NRF1 [Transcription] Back     alignment and domain information
>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription] Back     alignment and domain information
>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription] Back     alignment and domain information
>PRK00295 hypothetical protein; Provisional Back     alignment and domain information
>PRK00736 hypothetical protein; Provisional Back     alignment and domain information
>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional Back     alignment and domain information
>PRK02793 phi X174 lysis protein; Provisional Back     alignment and domain information
>PRK02119 hypothetical protein; Provisional Back     alignment and domain information
>PRK04406 hypothetical protein; Provisional Back     alignment and domain information
>PRK00846 hypothetical protein; Provisional Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>PF08172 CASP_C: CASP C terminal; InterPro: IPR012955 This domain is the C-terminal region of the CASP family of proteins Back     alignment and domain information
>KOG4797 consensus Transcriptional regulator [Transcription] Back     alignment and domain information
>TIGR02449 conserved hypothetical protein TIGR02449 Back     alignment and domain information
>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication Back     alignment and domain information
>KOG4005 consensus Transcription factor XBP-1 [Transcription] Back     alignment and domain information
>PRK13922 rod shape-determining protein MreC; Provisional Back     alignment and domain information
>PF12808 Mto2_bdg: Micro-tubular organiser Mto1 C-term Mto2-binding region; InterPro: IPR024545 This domain occurs at the C terminus of microtubule organising proteins in both budding and fission fungi Back     alignment and domain information
>KOG3335 consensus Predicted coiled-coil protein [General function prediction only] Back     alignment and domain information
>PF15058 Speriolin_N: Speriolin N terminus Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription] Back     alignment and domain information
>PF04102 SlyX: SlyX; InterPro: IPR007236 The SlyX protein has no known function Back     alignment and domain information
>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication Back     alignment and domain information
>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation Back     alignment and domain information
>PRK13169 DNA replication intiation control protein YabA; Reviewed Back     alignment and domain information
>PRK04325 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00219 mreC rod shape-determining protein MreC Back     alignment and domain information
>KOG4343 consensus bZIP transcription factor ATF6 [Transcription] Back     alignment and domain information
>PF08232 Striatin: Striatin family; InterPro: IPR013258 This domain is associated with the N terminus of striatin Back     alignment and domain information
>PF02183 HALZ: Homeobox associated leucine zipper; InterPro: IPR003106 This region is a plant specific leucine zipper that is always found associated with a homeobox [] Back     alignment and domain information
>PRK13169 DNA replication intiation control protein YabA; Reviewed Back     alignment and domain information
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family Back     alignment and domain information
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>PF04102 SlyX: SlyX; InterPro: IPR007236 The SlyX protein has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query727
1t2k_D61 Structure Of The Dna Binding Domains Of Irf3, Atf-2 2e-04
>pdb|1T2K|D Chain D, Structure Of The Dna Binding Domains Of Irf3, Atf-2 And Jun Bound To Dna Length = 61 Back     alignment and structure 
Iteration: 1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 223 KRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQL 281
           KR+  L RNR +A  SRQ++K +V+ LE K  ++ S    L S+++    E A LKQ L
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query727
1t2k_D61 Cyclic-AMP-dependent transcription factor ATF-2; p 2e-20
1dh3_A55 Transcription factor CREB; protein-DNA complex, tr 8e-17
1jnm_A62 Proto-oncogene C-JUN; BZIP, protein-DNA complex, t 2e-15
2wt7_A63 Proto-oncogene protein C-FOS; transcription, trans 4e-14
3a5t_A107 Transcription factor MAFG; protein-DNA complex, BZ 2e-12
2wt7_B90 Transcription factor MAFB; transcription, transcri 6e-12
1ci6_A63 Transcription factor ATF-4; BZIP; 2.60A {Homo sapi 2e-09
1gd2_E70 Transcription factor PAP1; basic leucine zipper, p 4e-08
2dgc_A63 Protein (GCN4); basic domain, leucine zipper, DNA 4e-07
1hjb_A87 Ccaat/enhancer binding protein beta; transcription 1e-06
1gu4_A78 CAAT/enhancer binding protein beta; transcription/ 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 1e-04
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61 Back     alignment and structure
 Score = 84.7 bits (210), Expect = 2e-20
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 223 KRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQL 281
           KR+  L RNR +A  SRQ++K +V+ LE K  ++ S    L S+++    E A LKQ L
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55 Back     alignment and structure
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62 Back     alignment and structure
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63 Back     alignment and structure
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107 Back     alignment and structure
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90 Back     alignment and structure
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63 Back     alignment and structure
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70 Back     alignment and structure
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63 Back     alignment and structure
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87 Back     alignment and structure
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query727
1t2k_D61 Cyclic-AMP-dependent transcription factor ATF-2; p 99.48
2wt7_A63 Proto-oncogene protein C-FOS; transcription, trans 99.47
1jnm_A62 Proto-oncogene C-JUN; BZIP, protein-DNA complex, t 99.45
1dh3_A55 Transcription factor CREB; protein-DNA complex, tr 99.35
1ci6_A63 Transcription factor ATF-4; BZIP; 2.60A {Homo sapi 99.22
2dgc_A63 Protein (GCN4); basic domain, leucine zipper, DNA 99.08
1gu4_A78 CAAT/enhancer binding protein beta; transcription/ 98.94
1hjb_A87 Ccaat/enhancer binding protein beta; transcription 98.92
1gd2_E70 Transcription factor PAP1; basic leucine zipper, p 98.82
2wt7_B90 Transcription factor MAFB; transcription, transcri 98.37
3a5t_A107 Transcription factor MAFG; protein-DNA complex, BZ 98.31
2oqq_A42 Transcription factor HY5; homodimer leucine zipper 98.3
1skn_P92 DNA-binding domain of SKN-1; complex (transcriptio 96.44
2c9l_Y63 EB1, zebra, BZLF1 trans-activator protein; viral p 94.73
2kz5_A91 Transcription factor NF-E2 45 kDa subunit; structu 90.73
2yy0_A53 C-MYC-binding protein; conserved hypothetical prot 90.45
3mq7_A121 Bone marrow stromal antigen 2; HIV, antiviral prot 89.14
1gd2_E70 Transcription factor PAP1; basic leucine zipper, p 88.91
3oja_B597 Anopheles plasmodium-responsive leucine-rich REPE 88.41
1kd8_A36 GABH AIV, GCN4 acid base heterodimer acid-D12IA16V 88.0
2oxj_A34 Hybrid alpha/beta peptide based on the GCN4-P1 Se 87.62
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 87.28
1kd8_B36 GABH BLL, GCN4 acid base heterodimer base-D12LA16L 86.09
3m48_A33 General control protein GCN4; leucine zipper, synt 85.96
1hjb_A87 Ccaat/enhancer binding protein beta; transcription 85.24
2jee_A81 YIIU; FTSZ, septum, coiled-coil, cell division, ce 85.0
3c3f_A34 Alpha/beta peptide with the GCN4-PLI SIDE chain S 84.22
1dip_A78 Delta-sleep-inducing peptide immunoreactive peptid 83.9
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 83.42
3he5_A49 Synzip1; heterodimeric coiled-coil, de novo protei 83.24
2hy6_A34 General control protein GCN4; protein design, para 82.2
3m91_A51 Proteasome-associated ATPase; coil COIL alpha heli 82.15
3efg_A78 Protein SLYX homolog; xanthomonas campestris PV. c 82.13
3c3g_A33 Alpha/beta peptide with the GCN4-PLI SIDE chain S 81.1
3o0z_A168 RHO-associated protein kinase 1; coiled-coil, tran 80.74
1fmh_A33 General control protein GCN4; coiled coil, leucine 80.69
2bni_A34 General control protein GCN4; four helix bundle, a 80.6
2wq1_A33 General control protein GCN4; TAA, nucleus, coiled 80.5
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
Probab=99.48  E-value=9.9e-14  Score=113.00  Aligned_cols=60  Identities=40%  Similarity=0.525  Sum_probs=58.3

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 035544          223 KRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQLS  282 (727)
Q Consensus       223 KR~RRllRNRESAqrSRqRKKqYVeeLE~KVk~LEsENqeLr~qls~LqaEN~~LRqQL~  282 (727)
                      ||++|++|||+||++||+|||+|+++||.++..|+.+|..|+.++..|+.|+..|+++|.
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ll   60 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLL   60 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            588999999999999999999999999999999999999999999999999999999985
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Back     alignment and structure
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Back     alignment and structure
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Back     alignment and structure
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Back     alignment and structure
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Back     alignment and structure
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Back     alignment and structure
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Back     alignment and structure
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Back     alignment and structure
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1 Back     alignment and structure
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y Back     alignment and structure
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Back     alignment and structure
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens} Back     alignment and structure
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A Back     alignment and structure
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A Back     alignment and structure
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A* Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B Back     alignment and structure
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A Back     alignment and structure
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli} Back     alignment and structure
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1 Back     alignment and structure
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene} Back     alignment and structure
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A Back     alignment and structure
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A Back     alignment and structure
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV} Back     alignment and structure
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A* Back     alignment and structure
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Back     alignment and structure
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A Back     alignment and structure
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ... Back     alignment and structure
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query727
d1sknp_74 Skn-1 {Caenorhabditis elegans [TaxId: 6239]} 93.3
d1nkpa_88 Myc proto-oncogene protein {Human (Homo sapiens) [ 84.1
d1nkpa_88 Myc proto-oncogene protein {Human (Homo sapiens) [ 82.82
d1nkpb_83 Max protein {Human (Homo sapiens) [TaxId: 9606]} 82.13
>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.30  E-value=0.016  Score=47.74  Aligned_cols=29  Identities=21%  Similarity=0.342  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 035544          220 EEMKRKARLMRNRESAQLSRQRKKHYVEE  248 (727)
Q Consensus       220 kEeKR~RRllRNRESAqrSRqRKKqYVee  248 (727)
                      .-.+..||.=+||+|||.||+||-...++
T Consensus        45 ~lirDIRRRGKNKvAAqnCRKRKld~~d~   73 (74)
T d1sknp_          45 QLIRKIRRRGKNKVAARTCRQRRTDRHDK   73 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhcccHHHHHHHHHhhhhhhcc
Confidence            34567889999999999999999876554
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure