Citrus Sinensis ID: 035631
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 684 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM5 | 669 | Probable rhamnose biosynt | yes | no | 0.947 | 0.968 | 0.708 | 0.0 | |
| Q9LH76 | 664 | Probable rhamnose biosynt | no | no | 0.947 | 0.975 | 0.703 | 0.0 | |
| Q9LPG6 | 667 | Probable rhamnose biosynt | no | no | 0.945 | 0.970 | 0.700 | 0.0 | |
| Q8VDR7 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.483 | 0.932 | 0.504 | 2e-92 | |
| O95455 | 350 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.476 | 0.931 | 0.483 | 1e-88 | |
| A6QLW2 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.476 | 0.918 | 0.483 | 1e-88 | |
| Q54WS6 | 434 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.466 | 0.735 | 0.476 | 1e-87 | |
| Q5UR12 | 323 | Putative dTDP-D-glucose 4 | N/A | no | 0.460 | 0.975 | 0.473 | 8e-80 | |
| P55294 | 355 | dTDP-glucose 4,6-dehydrat | yes | no | 0.469 | 0.904 | 0.412 | 2e-66 | |
| Q9S642 | 341 | dTDP-glucose 4,6-dehydrat | yes | no | 0.459 | 0.920 | 0.414 | 2e-65 |
| >sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/690 (70%), Positives = 570/690 (82%), Gaps = 42/690 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASY PK ILITGAAGFI SHV NRLI++YPDY+IV LDKLDYCS+LKNL+PS+ SPNFKF
Sbjct: 2 ASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+GQ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V DVA DIC LF ++PE I +V +RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSC---GNDDAFFLHNGY 364
W E+T WEEGLK T++WY +NP WWGDV+GAL PHP ++++ G++D
Sbjct: 302 WSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLS 361
Query: 365 EICGRSR----------------LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK 408
E ++ LKFLIYGKTGWIGGLLGK C +GIA+E+G GRLED+
Sbjct: 362 EKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDR 421
Query: 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLM 468
+SLL D++ V+PTHV N+AG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E +L+M
Sbjct: 422 SSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMM 481
Query: 469 NFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528
NFATGCI+EYD HP+GS IGFKE+D PNFT SFYSKTKAM
Sbjct: 482 NFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAM------------------- 522
Query: 529 INFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588
VE LLK Y+NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+LPI
Sbjct: 523 ----VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPI 578
Query: 589 AIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNH 648
+IEMA+RN +G WNFTNPGV+SHNEILE+Y++YI+P+ KW+NF LEEQAKV+VAPRSNN
Sbjct: 579 SIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNE 638
Query: 649 MDVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
MD +KLKKEFPE+LSIK+S+IKY PNKK
Sbjct: 639 MDASKLKKEFPELLSIKESLIKYAYGPNKK 668
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Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/685 (70%), Positives = 571/685 (83%), Gaps = 37/685 (5%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A+YKPK ILITGAAGFI SHV NRL+++YPDY+IV LDKLDYCS+LKNL+PS++SPNFKF
Sbjct: 2 ATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G + HVYN+GT +ER V+DVA DI LF ++P+ TI YV++RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL------------TDSCGND 355
W E+T WEEGL+ T+EWY +NP WWGDV+GAL PHP ++++ ++ GN
Sbjct: 302 WCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQ 361
Query: 356 DAFFLHNGYEICG--RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLD 413
+ C + LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+ SL+
Sbjct: 362 TFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIA 421
Query: 414 DMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATG 473
D++ ++P+HV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MNFATG
Sbjct: 422 DIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATG 481
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQV 533
CI+EYD+ HP+GS IGFKE+D+PNFT SFYSKTKAM V
Sbjct: 482 CIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAM-----------------------V 518
Query: 534 EGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593
E LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMT+LDE+LPI+IEMA
Sbjct: 519 EELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMA 578
Query: 594 RRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653
+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNFNLEEQAKV+VAPRSNN MD K
Sbjct: 579 KRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAK 638
Query: 654 LKKEFPEVLSIKDSIIKYVLEPNKK 678
L KEFPE+LSIKDS+IKYV EPNK+
Sbjct: 639 LSKEFPEMLSIKDSLIKYVFEPNKR 663
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Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/687 (70%), Positives = 568/687 (82%), Gaps = 40/687 (5%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
+YKPK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS LKNL PS +SPNFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI DL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEK+IPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 184 ITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 243
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G IGHVYNVGTK+ER V+DVA DIC LF +PE +I +V++RPFND RYFLDDQKLK+LG
Sbjct: 244 GEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLG 303
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL------------TDSCGND 355
W+E+T WE+GLK T++WY +NP WWGDV+GAL PHP ++++ D N
Sbjct: 304 WQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNT 363
Query: 356 DAFFL----HNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSL 411
F NG + ++ LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+ SL
Sbjct: 364 VQTFTVVTPKNG-DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASL 422
Query: 412 LDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFA 471
+ D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MNFA
Sbjct: 423 VADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFA 482
Query: 472 TGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINF 531
TGCI+EYD+ HP+GS IGFKE+D+PNF SFYSKTKAM
Sbjct: 483 TGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAM---------------------- 520
Query: 532 QVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
VE LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVV+IPNSMTVLDE+LPI+IE
Sbjct: 521 -VEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIE 579
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651
MA+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNF +EEQAKV+VA RSNN MD
Sbjct: 580 MAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDG 639
Query: 652 TKLKKEFPEVLSIKDSIIKYVLEPNKK 678
+KL KEFPE+LSIK+S++KYV EPNK+
Sbjct: 640 SKLSKEFPEMLSIKESLLKYVFEPNKR 666
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Involved in the synthesis of pectinaceous rhamnogalacturonan I, the major component of Arabidopsis mucilage. Required for the normal seed coat epidermal development. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2 | Back alignment and function description |
|---|
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 227/343 (66%), Gaps = 12/343 (3%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YPDY IV LDKLDYC+SLKNL P N+K
Sbjct: 13 PGSFA-KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYE 131
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 132 AG-VEKFIYVSTDEVYGGSLDQEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY ADV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SV+ +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 TKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGWK K PWEEG+K T+EWY+KN H W + AL P P
Sbjct: 307 EKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
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Mus musculus (taxid: 10090) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/337 (48%), Positives = 224/337 (66%), Gaps = 11/337 (3%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K++L+TG AGFI SH+ L+++YP+Y I+ LDKLDYC+SLKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A +V++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 133 FIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y P + TR
Sbjct: 137 FIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
+NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L +G G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 252 HVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+YN+GT E SV+ +A ++ L K E E + YV DRP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
GW+ K PW+EG+K T+EWY++N H W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
|
Homo sapiens (taxid: 9606) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/337 (48%), Positives = 222/337 (65%), Gaps = 11/337 (3%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K++L+TG AGFI SH+ L+++YP+Y I+ LDKLDYC+SLKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A +V++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 133 FIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y P + TR
Sbjct: 137 FIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
+NVYGP+Q+PEK+IPKFI L ++ IHG G R++LY DV EAF +L +G G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 252 HVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+YN+GT E SVL +A ++ L K E E + YV DRP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGL 312
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
GW+ K PW+EG+K T+EWY++N H W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
|
Bos taurus (taxid: 9913) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 224/361 (62%), Gaps = 42/361 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KILITG AGFIGSH+ L K + + +I+ LDKLDYCS++ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
++L+ + E ID ++H AA THVDNSF S +FT NNI GTH LLE CK ++K+
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 133 FIHVSTDEVYGETDMESDIGNP--------EASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
FI+VSTDEVYG +E + N E S L PTNPYSA+KAGAE LV +Y++S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LP I TR NN+YGP Q+PEK+IPKFI L + ++ IHG G N R+YLY D+ AFD+I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTL------------------------------ 274
L +G IG+VYN+GT E S LDVA I +
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINISINLNNNNNNNNNNNNNNNNNNNNNNNNNN 308
Query: 275 --FK-LEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHW 331
F ++ +K I+Y+ DRPFNDHRY ++ KL LGWK+ WEEG++ T WYK N ++
Sbjct: 309 NDFNIMDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNY 368
Query: 332 W 332
W
Sbjct: 369 W 369
|
Dictyostelium discoideum (taxid: 44689) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/321 (47%), Positives = 209/321 (65%), Gaps = 6/321 (1%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K IL+TG GFIGS+ N + Y + I D DYC+S++N+ + + K +KGDI
Sbjct: 2 KNILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCASVENVEWNNRT---KLIKGDI 58
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
DL+ + L IDTI+HFAA +HVDNSF NS FT N++GTHVLLE ++ G++K
Sbjct: 59 RNFDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLKL 118
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F H+STDEVYGE D + E S L PTNPY+ATKAGAE +V +Y SY LP I R
Sbjct: 119 FFHMSTDEVYGEIDTTDT--SREVSLLCPTNPYAATKAGAEHIVKSYFLSYKLPIIIARC 176
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
NNVYG NQ+PEKLIPKFI + G++L I G G++ R++++ DVA+A D++++ GVIG
Sbjct: 177 NNVYGRNQYPEKLIPKFICSLLDGKKLHIQGTGNSRRNFIHAIDVADAVDLVINNGVIGE 236
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKE-K 311
YN+G E SVLDVA +C + + E + YV DR FND RY + + K+K LGW++ +
Sbjct: 237 TYNIGVTNEHSVLDVAQILCDIAGVNLENQLEYVPDRLFNDFRYNITNDKIKSLGWEQSR 296
Query: 312 TPWEEGLKLTLEWYKKNPHWW 332
+++ L +WYK N H +
Sbjct: 297 KDFKKELVELFDWYKVNRHRY 317
|
Acanthamoeba polyphaga (taxid: 5757) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P55294|RMLB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B (strain MC58) GN=rfbB1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 201/342 (58%), Gaps = 21/342 (6%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KIL+TG AGFIGS V +I+N D +V +DKL Y +L++L +P + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ--- 129
++ + D +MH AA++HVD S G++ EF NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 130 -----VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
RF H+STDEVYG+ D+ E + P++PYSA+KA ++ LV A+ R+YG
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFT-ETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LPTI T +N YGP FPEKLIP IL A+ G+ LP++G+G +R +L+ D A A +
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQV 239
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT---------IHYVQDRPFNDH 294
+ GV+G YN+G E++ ++V IC L +L PEK I +VQDRP +D
Sbjct: 240 VTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDV 299
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV 335
RY +D K++R LGW +E GL+ T++WY N WW +V
Sbjct: 300 RYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9S642|RMLB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=rfbB1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 198/335 (59%), Gaps = 21/335 (6%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KIL+TG AGFIGS V +I+N D +V LDKL Y +L++L +P + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ--- 129
++ + D +MH AA++HVD S G++ EF NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 130 -----VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
RF H+STDEVYG+ D+ E + P++PYSA+KA ++ LV A+ R+YG
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFT-ETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LPTI T +N YGP FPEKLIP IL A+ G+ LP++G+G +R +L+ D A A +
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQV 239
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT---------IHYVQDRPFNDH 294
+ GV+G YN+G E++ ++V IC L +L PEK I +VQDRP +D
Sbjct: 240 VTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDA 299
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
RY +D K++R LGW+ +E GL+ T++WY N
Sbjct: 300 RYAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 684 | ||||||
| 225464343 | 657 | PREDICTED: probable rhamnose biosyntheti | 0.945 | 0.984 | 0.757 | 0.0 | |
| 224121144 | 660 | predicted protein [Populus trichocarpa] | 0.947 | 0.981 | 0.756 | 0.0 | |
| 449442224 | 668 | PREDICTED: probable rhamnose biosyntheti | 0.942 | 0.965 | 0.745 | 0.0 | |
| 297839725 | 669 | RHM1/ROL1 [Arabidopsis lyrata subsp. lyr | 0.947 | 0.968 | 0.710 | 0.0 | |
| 224119002 | 670 | predicted protein [Populus trichocarpa] | 0.947 | 0.967 | 0.709 | 0.0 | |
| 15218420 | 669 | UDP-glucose 4,6-dehydratase [Arabidopsis | 0.947 | 0.968 | 0.708 | 0.0 | |
| 211906526 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.947 | 0.971 | 0.702 | 0.0 | |
| 283488501 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.945 | 0.970 | 0.702 | 0.0 | |
| 283488503 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.947 | 0.971 | 0.703 | 0.0 | |
| 225461808 | 675 | PREDICTED: probable rhamnose biosyntheti | 0.947 | 0.96 | 0.701 | 0.0 |
| >gi|225464343|ref|XP_002271970.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/677 (75%), Positives = 590/677 (87%), Gaps = 30/677 (4%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
PA Y P+ ILITGAAGFI SHVTNRL+KN+PDY IVALDKLDYCS++KNL PSR+S NFK
Sbjct: 5 PAPYVPRNILITGAAGFIASHVTNRLVKNHPDYRIVALDKLDYCSNVKNLGPSRSSSNFK 64
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F+KGDI CADL+N+LLV+E IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK+
Sbjct: 65 FVKGDIVCADLVNHLLVAEDIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKV 124
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
T ++KRFIHVSTDEVYGETD+++DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP
Sbjct: 125 TKRIKRFIHVSTDEVYGETDLDTDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 184
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
TITTRGNNVYGPNQFPEKLIPKFILLAMKG+QLPIHG+GSNVRSYLYC DVAEAF+V+LH
Sbjct: 185 TITTRGNNVYGPNQFPEKLIPKFILLAMKGEQLPIHGDGSNVRSYLYCEDVAEAFEVVLH 244
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+GVIGHVYN+GTKKERSVLDVA DIC LF+L+ ++ I++V DRPFND RYFLDDQKLK+L
Sbjct: 245 KGVIGHVYNIGTKKERSVLDVAEDICKLFRLDSKQAINFVHDRPFNDKRYFLDDQKLKKL 304
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYE- 365
GW+E+TPWEEGL+ T+EWY KNP WWGDV+ AL PHP + ++ + NDD FL G +
Sbjct: 305 GWEERTPWEEGLRRTMEWYTKNPGWWGDVSAALHPHPRISMI--AFPNDDQCFLQYGCDK 362
Query: 366 ----ICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPT 421
S LKFLIYG+TGWIGGLLGK CKD GI FE+G GRL+D+ +L++D++RV+PT
Sbjct: 363 DCSPASKSSGLKFLIYGRTGWIGGLLGKLCKDGGIEFEYGKGRLQDRKTLMEDIRRVQPT 422
Query: 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSM 481
HV NAAG+TGRPNVDWCESH+VETIRTNV+GTLTLADVCKE+ +L+MNFATGCI+EYD
Sbjct: 423 HVFNAAGVTGRPNVDWCESHKVETIRTNVLGTLTLADVCKEQGLLMMNFATGCIFEYDEE 482
Query: 482 HPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYE 541
HP+GS +GFKE+D+PNF SFYSKTKAM VE LL+ YE
Sbjct: 483 HPEGSGVGFKEEDKPNFVGSFYSKTKAM-----------------------VEELLREYE 519
Query: 542 NVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAW 601
NVCTLR+RMPISSDLSNPRNF+TK+ARYNKVVNIPNSMTVLDE+LPI+IEMA+RNCRG W
Sbjct: 520 NVCTLRVRMPISSDLSNPRNFITKIARYNKVVNIPNSMTVLDELLPISIEMAKRNCRGIW 579
Query: 602 NFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPEV 661
NFTNPGV+SHNEILE+Y++YIDP +W NFNLEEQAKV+VAPRSNN +D +KLKKEFPE+
Sbjct: 580 NFTNPGVVSHNEILEMYRDYIDPGFEWVNFNLEEQAKVIVAPRSNNELDASKLKKEFPEL 639
Query: 662 LSIKDSIIKYVLEPNKK 678
LSIK+SIIKYV EPNKK
Sbjct: 640 LSIKESIIKYVFEPNKK 656
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121144|ref|XP_002330754.1| predicted protein [Populus trichocarpa] gi|222872556|gb|EEF09687.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/681 (75%), Positives = 585/681 (85%), Gaps = 33/681 (4%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
+PA Y P+KILITGAAGFI SHV RLIK+YPDY+IVALDKLDYCS+LKNL R SPNF
Sbjct: 4 DPAPYAPRKILITGAAGFIASHVIRRLIKDYPDYKIVALDKLDYCSNLKNLATCRGSPNF 63
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF+KGDI CADL+N+LL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK
Sbjct: 64 KFVKGDIACADLVNHLLIAEDIDTIMHFAAQTHVDNSFGNSFEFTTNNIYGTHVLLEACK 123
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+T ++KRFIHVSTDEVYGETDME+DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL
Sbjct: 124 VTKKIKRFIHVSTDEVYGETDMETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 183
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P ITTRGNNVYGPNQ+PEKLIPKFILLA+KG+QLPIHG+GSNVRS+LYC DVAEAFDVIL
Sbjct: 184 PIITTRGNNVYGPNQYPEKLIPKFILLALKGEQLPIHGDGSNVRSFLYCEDVAEAFDVIL 243
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR 305
H+G IGHVYN+GTKKER VLDVA DIC L+ L+PEK+I+YVQDRPFNDHRYFLDDQKLK+
Sbjct: 244 HKGAIGHVYNIGTKKERRVLDVAEDICKLYGLDPEKSINYVQDRPFNDHRYFLDDQKLKK 303
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGY- 364
LGW+E TPWEEGLK+T+EWY KNP WW DV+ AL PHP + ++ S NDD++F G
Sbjct: 304 LGWQESTPWEEGLKMTMEWYTKNPDWWDDVSAALHPHPRLSMIAQS--NDDSWFSQKGLI 361
Query: 365 -------EICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKR 417
+ G S LKFLIYGKTGWIGGLLGK CKD GIAFE+G GRLED+ S+L D+K
Sbjct: 362 SDAKEAGKSDGSSGLKFLIYGKTGWIGGLLGKLCKDGGIAFEYGQGRLEDRKSILKDIKN 421
Query: 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYE 477
+ PTHV NAAG+TGRPNVDWCESH+VETIRTNV+GTLTLADVCKE N+L+MNFATGCI+E
Sbjct: 422 INPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEHNLLMMNFATGCIFE 481
Query: 478 YDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLL 537
YD H +GS IGFKE+D+PNFT SFYSKTKAM VE LL
Sbjct: 482 YDQDHQEGSGIGFKEEDKPNFTGSFYSKTKAM-----------------------VEELL 518
Query: 538 KAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNC 597
+ YENVCTLR+RMPISSDLSNPRNF+TK+ RY+KVVNIPNSMTVLDE+LPI+IEMA+RNC
Sbjct: 519 REYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVNIPNSMTVLDELLPISIEMAKRNC 578
Query: 598 RGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKE 657
RG WNFTNPGV+SHNEILE+Y++YIDP+ KW NF+LEEQAKV+VAPRSNN +D TKLK E
Sbjct: 579 RGIWNFTNPGVVSHNEILEMYRDYIDPEFKWMNFDLEEQAKVIVAPRSNNELDGTKLKNE 638
Query: 658 FPEVLSIKDSIIKYVLEPNKK 678
FPE LSIK+SI++YV +PNKK
Sbjct: 639 FPETLSIKESILEYVFKPNKK 659
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442224|ref|XP_004138882.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/685 (74%), Positives = 582/685 (84%), Gaps = 40/685 (5%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
Y PK ILITGAAGFI SHVTNRLIKNYP Y+IVALDKLDYCS++KNL PS+ SPNF+F+
Sbjct: 8 QYAPKNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSNIKNLGPSQTSPNFRFI 67
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
KGDI ADL+NYLLV+E IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK+T
Sbjct: 68 KGDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQ 127
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
++KRFIHVSTDEVYGETD+E+DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI
Sbjct: 128 RIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 187
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
TTRGNNVYGPNQ+PEKLIPKFILLAMKG++LPIHGNGSNVRSYLY DVAEAF+VILH+G
Sbjct: 188 TTRGNNVYGPNQYPEKLIPKFILLAMKGEKLPIHGNGSNVRSYLYSEDVAEAFEVILHKG 247
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGW 308
VIGHVYN+GTKKER VLDVA D+C LF PEK I +VQDRPFND RYFLDDQKLK+LGW
Sbjct: 248 VIGHVYNIGTKKERRVLDVAGDVCKLFGSTPEKAIDFVQDRPFNDQRYFLDDQKLKKLGW 307
Query: 309 KEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYEICG 368
+E TPWEEGLK T++WY +NP WWGDV+ AL PHP + + T S N+D++F G+
Sbjct: 308 QESTPWEEGLKRTMDWYTQNPDWWGDVSAALDPHPRISVATHS--NEDSWFFQYGFSRLT 365
Query: 369 RS---------------RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLD 413
R+ LKFLIYG+TGWIGGLLGK CK+KGI F +G+GRLED+ SL++
Sbjct: 366 RTCSELNKDSGSERNQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFAYGSGRLEDRRSLIE 425
Query: 414 DMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATG 473
D++RVRPTHV NAAG+TGRPNVDWCESH++ETIR NV+GTLTLADVCKE+N+LLMNFATG
Sbjct: 426 DIQRVRPTHVFNAAGVTGRPNVDWCESHKIETIRANVVGTLTLADVCKEQNLLLMNFATG 485
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQV 533
CI+EYD H GS +GFKE+D+PNF SFYSKTKAM V
Sbjct: 486 CIFEYDKEHQLGSGVGFKEEDKPNFIGSFYSKTKAM-----------------------V 522
Query: 534 EGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593
E LL+ Y NVCTLR+RMPISSDLSNPRNF+TK++RYNKVVNIPNSMTVLDE+LPI+IEMA
Sbjct: 523 EELLRDYPNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMA 582
Query: 594 RRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653
+RNCRG WNFTNPGV+SHNEILE+YK+YIDP+ KW NFNLEEQAKV+VAPRSNN +D +K
Sbjct: 583 KRNCRGIWNFTNPGVVSHNEILEMYKKYIDPKFKWENFNLEEQAKVIVAPRSNNELDASK 642
Query: 654 LKKEFPEVLSIKDSIIKYVLEPNKK 678
LKKEFPE+LSIK+SI+KYV E NKK
Sbjct: 643 LKKEFPELLSIKESILKYVFEANKK 667
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839725|ref|XP_002887744.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] gi|297333585|gb|EFH64003.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/690 (71%), Positives = 571/690 (82%), Gaps = 42/690 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASY PK ILITGAAGFI SHV NRLI++YP Y IV LDKLDYCS+LKNL+PS+ SPNFKF
Sbjct: 2 ASYTPKNILITGAAGFIASHVANRLIRSYPHYNIVVLDKLDYCSNLKNLNPSKQSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+GQ LPIHG+GSNVRSYLYC DVAEAF+VILH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVILHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V DVA DIC LF ++PE I +V++RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVGHVYNIGTKKERRVNDVARDICKLFSMDPEANIKFVENRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSC---GNDDAFFLHNGY 364
W E+T WEEGLK T+EWY +NP WWGDV+GAL PHP ++++ G++D
Sbjct: 302 WSERTTWEEGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLS 361
Query: 365 EICGRSR----------------LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK 408
E ++ LKFLIYGKTGWIGGLLGK C+ +GIA+E+G GRLED+
Sbjct: 362 EKPSQTHMVVPSPRSSGTPQKPSLKFLIYGKTGWIGGLLGKICEKQGIAYEYGKGRLEDR 421
Query: 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLM 468
+SLL D++ V+PTHV N+AG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E +L+M
Sbjct: 422 SSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMM 481
Query: 469 NFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528
NFATGCI+EYD HP+GS IGFKE+D PNFT SFYSKTKAM
Sbjct: 482 NFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAM------------------- 522
Query: 529 INFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588
VE LLK Y+NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+LPI
Sbjct: 523 ----VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPI 578
Query: 589 AIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNH 648
++EMA+RN +G WNFTNPGV+SHNEILE+Y++YI+P+ KW+NF LEEQAKV+VAPRSNN
Sbjct: 579 SVEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNE 638
Query: 649 MDVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
MD +KLKKEFPE+LSIK+S+IKY EPNKK
Sbjct: 639 MDASKLKKEFPELLSIKESLIKYAFEPNKK 668
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224119002|ref|XP_002331301.1| predicted protein [Populus trichocarpa] gi|222873884|gb|EEF11015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/691 (70%), Positives = 573/691 (82%), Gaps = 43/691 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A+Y PK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS+LKNL PS++SPNFKF
Sbjct: 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+GSNVRSYLYC DVAEAF+VILH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMQGKDLPIHGDGSNVRSYLYCEDVAEAFEVILHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYNVGTKKER V+DVA DIC LF ++P+K+I +V++RPFND RYFLDDQKLK LG
Sbjct: 242 GEVGHVYNVGTKKERRVIDVAKDICNLFSMDPDKSIKFVENRPFNDQRYFLDDQKLKILG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL------TDSCGNDDAFFLH 361
W E T WEEGL+ T+EWY +NP WWGDVTGAL PHP ++++ S N DA ++
Sbjct: 302 WSEHTTWEEGLRKTIEWYTQNPDWWGDVTGALLPHPRMLMMPGGRHFDGSEENRDASYVS 361
Query: 362 N--------------GYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLED 407
N G + LKFLIYG+TGWIGGLLGK C+ +GI+FE+G GRLED
Sbjct: 362 NNSNQARMVIPVTKVGTGSPRKPSLKFLIYGRTGWIGGLLGKLCEKQGISFEYGKGRLED 421
Query: 408 KNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLL 467
++SLL D++ +RPTHV NAAG+TGRPNVDWCESH+ ETIRTNV GTLTLADVC+E N+L+
Sbjct: 422 RSSLLSDIQNIRPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHNLLM 481
Query: 468 MNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIEC 527
+NFATGCI+EYD+ HP+GS IGF E+D+PNF SFYSKTKAM
Sbjct: 482 VNFATGCIFEYDAGHPEGSGIGFTEEDKPNFIGSFYSKTKAM------------------ 523
Query: 528 LINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLP 587
VE LL+ Y+NVCTLR+RMPISSDLSNPRNF+TK++RYNKVVNIPNSMT+L+E+LP
Sbjct: 524 -----VEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILEELLP 578
Query: 588 IAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNN 647
I+IEMA+RN RG WNFTNPGV+SHNEIL++YK YIDP W NFNLEEQAKV+VAPRSNN
Sbjct: 579 ISIEMAKRNLRGIWNFTNPGVVSHNEILDMYKNYIDPNFTWVNFNLEEQAKVIVAPRSNN 638
Query: 648 HMDVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
+D +KLK EFPE+L IK+S+IKYV EPNK+
Sbjct: 639 ELDASKLKNEFPELLPIKESLIKYVFEPNKR 669
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15218420|ref|NP_177978.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|62901057|sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gi|4836876|gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|14596091|gb|AAK68773.1| Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|20148285|gb|AAM10033.1| similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|332198001|gb|AEE36122.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/690 (70%), Positives = 570/690 (82%), Gaps = 42/690 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASY PK ILITGAAGFI SHV NRLI++YPDY+IV LDKLDYCS+LKNL+PS+ SPNFKF
Sbjct: 2 ASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+GQ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V DVA DIC LF ++PE I +V +RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSC---GNDDAFFLHNGY 364
W E+T WEEGLK T++WY +NP WWGDV+GAL PHP ++++ G++D
Sbjct: 302 WSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLS 361
Query: 365 EICGRSR----------------LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK 408
E ++ LKFLIYGKTGWIGGLLGK C +GIA+E+G GRLED+
Sbjct: 362 EKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDR 421
Query: 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLM 468
+SLL D++ V+PTHV N+AG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E +L+M
Sbjct: 422 SSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMM 481
Query: 469 NFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528
NFATGCI+EYD HP+GS IGFKE+D PNFT SFYSKTKAM
Sbjct: 482 NFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAM------------------- 522
Query: 529 INFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588
VE LLK Y+NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+LPI
Sbjct: 523 ----VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPI 578
Query: 589 AIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNH 648
+IEMA+RN +G WNFTNPGV+SHNEILE+Y++YI+P+ KW+NF LEEQAKV+VAPRSNN
Sbjct: 579 SIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNE 638
Query: 649 MDVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
MD +KLKKEFPE+LSIK+S+IKY PNKK
Sbjct: 639 MDASKLKKEFPELLSIKESLIKYAYGPNKK 668
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906526|gb|ACJ11756.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/688 (70%), Positives = 573/688 (83%), Gaps = 40/688 (5%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
+SY PK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS+LKNL PS++SPNFKF
Sbjct: 2 SSYTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+GSNVRSYLYC DVAEAF+VILH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V+DVA DIC LF ++PE +I +V++RPFND RYFLDD+KLK LG
Sbjct: 242 GEVGHVYNIGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDEKLKNLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL--------------TDSCG 353
W E+T WEEGLK T+EWY +NP WWGDV+GAL PHP ++++ + + G
Sbjct: 302 WSEQTVWEEGLKKTIEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDSEEGKGTSFASG 361
Query: 354 NDDAFFLHNGYEICGRSR---LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS 410
+ + ++ ++ LKFLIYG+TGWIGGLLG+ C+ +GI FE+G GRLED++S
Sbjct: 362 PNQTRMVVPTFKTSSSTQKPALKFLIYGRTGWIGGLLGQLCEKQGIPFEYGRGRLEDRSS 421
Query: 411 LLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNF 470
L+ D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIRTNV GTLTLADVC+E +L+MNF
Sbjct: 422 LMADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLMMNF 481
Query: 471 ATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLIN 530
ATGCI+EYD+ HP+GS IG+KE+D+PNFT SFYSKTKAM
Sbjct: 482 ATGCIFEYDAGHPEGSGIGYKEEDKPNFTGSFYSKTKAM--------------------- 520
Query: 531 FQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAI 590
VE LLK Y+NVCTLR+RMPISSDL+NPRNF+TK+ARYNKVVNIPNSMT+LDE+LPI+I
Sbjct: 521 --VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIARYNKVVNIPNSMTILDELLPISI 578
Query: 591 EMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMD 650
EMA+RN G WNFTNPGV+SHNEILE+YK YIDP+ +W NF LEEQAKV+VAPRSNN MD
Sbjct: 579 EMAKRNLNGIWNFTNPGVVSHNEILEMYKAYIDPKFQWVNFTLEEQAKVIVAPRSNNEMD 638
Query: 651 VTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
+KLK EFP++L IK+S+IKYV EPNK+
Sbjct: 639 ASKLKNEFPDLLPIKESLIKYVFEPNKR 666
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|283488501|gb|ADB24772.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/689 (70%), Positives = 566/689 (82%), Gaps = 42/689 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASYKPK ILITGAAGFI SHV NRL++NYP+Y+IV LDKLDYCS+ KNL PS+ SP+FKF
Sbjct: 2 ASYKPKNILITGAAGFIASHVANRLVRNYPEYKIVVLDKLDYCSNTKNLFPSKLSPSFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIESADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+GSNVRSYLYC DVAEAF+VILH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +G VYN+GTKKER V+DVA DIC LF ++PE +I +V++RPFND RYFLDDQ+LK LG
Sbjct: 242 GEVGRVYNIGTKKERRVIDVAKDICKLFSMDPETSIEFVENRPFNDQRYFLDDQRLKNLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYEIC 367
W E+T WE+GLK T+EWY +NP WWGDVTGAL PHP ++++ S D Y +
Sbjct: 302 WSERTVWEDGLKKTIEWYTQNPDWWGDVTGALLPHPRMLMMAGSTHFDSEDSKETSY-VS 360
Query: 368 G------------------RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKN 409
G + LKFLIYG+TGWIGGLLG+ C+ +GIAF +G GRLED++
Sbjct: 361 GPNQTRMVVPTPKGGSSPQKQSLKFLIYGRTGWIGGLLGQLCEKQGIAFAYGKGRLEDRS 420
Query: 410 SLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMN 469
SL D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC++ +L+MN
Sbjct: 421 SLNADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCRDHGLLMMN 480
Query: 470 FATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLI 529
FATGCI+EYD+ HPQGS IGFKE+D+PNF SFYSKTKAM
Sbjct: 481 FATGCIFEYDAAHPQGSGIGFKEEDKPNFIGSFYSKTKAM-------------------- 520
Query: 530 NFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589
VE L K Y+NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+LPI+
Sbjct: 521 ---VEELFKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPIS 577
Query: 590 IEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHM 649
IEMA+RN RG WNFTNPGV+SHNEILE+YK YIDP+ KW NF LEEQAKV+VAPRSNN M
Sbjct: 578 IEMAKRNLRGIWNFTNPGVVSHNEILEMYKTYIDPKFKWENFTLEEQAKVIVAPRSNNEM 637
Query: 650 DVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
D +KLKKEFPE+LSIK+S+IKY EPN++
Sbjct: 638 DASKLKKEFPELLSIKESLIKYAFEPNRR 666
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|283488503|gb|ADB24773.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/688 (70%), Positives = 570/688 (82%), Gaps = 40/688 (5%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A+Y PK ILITGAAGFI SHV NRL++NYPDY+IV LDKLDYCS+LKNL PS++S NFKF
Sbjct: 2 ATYTPKNILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSQSSRNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+G+NVRSYLYC DVAEAF+VILH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGTNVRSYLYCEDVAEAFEVILHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYNVGTKKER V+DVA DIC LF ++ E +I +V++RPFND RYFLDDQKLK LG
Sbjct: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDSETSIKFVENRPFNDQRYFLDDQKLKNLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLT-----DSCGNDDAFFLHN 362
W E+T WE+GLK T+EWY +NP WWGDV+GAL PHP ++++ DS D ++ +
Sbjct: 302 WSERTVWEDGLKKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRQFDSEEGKDTSYISS 361
Query: 363 GYEI------------CGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS 410
+ + LKFLIYG+TGWIGGLLG+ C +GI FE+G GRLED++S
Sbjct: 362 PSQTQMVVPTSKSSVSSQKPALKFLIYGRTGWIGGLLGQLCDKQGIPFEYGKGRLEDRSS 421
Query: 411 LLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNF 470
L D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIRTNV GTLTLADVC+E +L+MNF
Sbjct: 422 LTADIRNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLMMNF 481
Query: 471 ATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLIN 530
ATGCI+EYD+ HPQGS IGFKE+D+PNFT SFYSKTKAM
Sbjct: 482 ATGCIFEYDAGHPQGSGIGFKEEDKPNFTGSFYSKTKAM--------------------- 520
Query: 531 FQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAI 590
VE LLK Y NVCTLR+RMPISSDL+NPRNF+TK++RY+KVVNIPNSMT+LDE+LPI+I
Sbjct: 521 --VEELLKEYNNVCTLRVRMPISSDLNNPRNFITKISRYSKVVNIPNSMTILDELLPISI 578
Query: 591 EMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMD 650
EMA+RN G WNFTNPGV+SHNEILE+YK+YIDP+ +W+NF LEEQAKV+VAPRSNN MD
Sbjct: 579 EMAKRNLTGIWNFTNPGVVSHNEILEMYKKYIDPKFQWANFTLEEQAKVIVAPRSNNEMD 638
Query: 651 VTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
+KLKKEFPE+L IK+S+IKYV EPNK+
Sbjct: 639 ASKLKKEFPELLPIKESLIKYVFEPNKR 666
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225461808|ref|XP_002285634.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/693 (70%), Positives = 570/693 (82%), Gaps = 45/693 (6%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A++ PK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS+LKNL PS++SPNFKF
Sbjct: 2 ATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+GSNVRSYLYC DVAEAF+VILHR
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVILHR 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V+DVA D+C LF ++PE +I +V++RPFND RYFLDDQKLK LG
Sbjct: 242 GEVGHVYNIGTKKERRVIDVAKDVCNLFSMDPETSIKFVENRPFNDQRYFLDDQKLKILG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL-------------TDSCGN 354
W E+T W+EGLK T+EWY NP+WWGDV+GAL PHP ++++ +DS +
Sbjct: 302 WSERTTWQEGLKKTMEWYINNPNWWGDVSGALLPHPRMLMMPGGIERHFDGSEDSDSTAS 361
Query: 355 DDAFFLHNGYEICG---------RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL 405
+ L+ + + LKFL+YG+TGWIGGLLGK C+ +GI +E+G GRL
Sbjct: 362 PVSSNLNQTRMVVPVPKSVSSPRKPSLKFLLYGRTGWIGGLLGKLCEKQGIPYEYGRGRL 421
Query: 406 EDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV 465
ED+ SLL D++ V+PTHV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E +
Sbjct: 422 EDRASLLADIQNVKPTHVFNAAGVTGRPNVDWCESHKPETIRANVAGTLTLADVCREHGL 481
Query: 466 LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICI 525
L+MNFATGCI+EYD+ HP+GS IGFKE+D PNF SFYSKTKAM
Sbjct: 482 LMMNFATGCIFEYDAAHPEGSGIGFKEEDTPNFAGSFYSKTKAM---------------- 525
Query: 526 ECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEM 585
VE LLK ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+
Sbjct: 526 -------VEELLKEFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDEL 578
Query: 586 LPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRS 645
LPI+IEMA+RNCRG WNFTNPGV+SHNEILE+YK YIDP KW+NF LEEQAKV+VA RS
Sbjct: 579 LPISIEMAKRNCRGIWNFTNPGVVSHNEILEMYKSYIDPNFKWANFTLEEQAKVIVAARS 638
Query: 646 NNHMDVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
NN MD +KLK EFPE+L IKDS+IKYV EPN+K
Sbjct: 639 NNEMDASKLKNEFPELLPIKDSLIKYVFEPNQK 671
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 684 | ||||||
| TAIR|locus:2202960 | 669 | RHM1 "rhamnose biosynthesis 1" | 0.498 | 0.509 | 0.788 | 8.3e-279 | |
| TAIR|locus:2099372 | 664 | RHM3 "rhamnose biosynthesis 3" | 0.947 | 0.975 | 0.709 | 7.4e-272 | |
| TAIR|locus:2024902 | 667 | MUM4 "MUCILAGE-MODIFIED 4" [Ar | 0.948 | 0.973 | 0.699 | 3.8e-268 | |
| TAIR|locus:2015489 | 301 | NRS/ER "nucleotide-rhamnose sy | 0.213 | 0.485 | 0.753 | 7.6e-118 | |
| MGI|MGI:1923605 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.483 | 0.932 | 0.504 | 7.7e-87 | |
| DICTYBASE|DDB_G0279465 | 434 | tgds "putative dTDP-D-glucose | 0.381 | 0.601 | 0.529 | 5.7e-86 | |
| RGD|1306544 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.483 | 0.932 | 0.492 | 8.9e-86 | |
| UNIPROTKB|F1RP60 | 355 | TGDS "Uncharacterized protein" | 0.483 | 0.932 | 0.489 | 1.7e-84 | |
| UNIPROTKB|E2QWQ8 | 355 | TGDS "Uncharacterized protein" | 0.483 | 0.932 | 0.481 | 4.4e-84 | |
| UNIPROTKB|A6QLW2 | 355 | TGDS "dTDP-D-glucose 4,6-dehyd | 0.483 | 0.932 | 0.481 | 9.1e-84 |
| TAIR|locus:2202960 RHM1 "rhamnose biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1497 (532.0 bits), Expect = 8.3e-279, Sum P(3) = 8.3e-279
Identities = 269/341 (78%), Positives = 307/341 (90%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASY PK ILITGAAGFI SHV NRLI++YPDY+IV LDKLDYCS+LKNL+PS+ SPNFKF
Sbjct: 2 ASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+GQ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V DVA DIC LF ++PE I +V +RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL 348
W E+T WEEGLK T++WY +NP WWGDV+GAL PHP ++++
Sbjct: 302 WSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMM 342
|
|
| TAIR|locus:2099372 RHM3 "rhamnose biosynthesis 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2614 (925.2 bits), Expect = 7.4e-272, P = 7.4e-272
Identities = 486/685 (70%), Positives = 575/685 (83%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A+YKPK ILITGAAGFI SHV NRL+++YPDY+IV LDKLDYCS+LKNL+PS++SPNFKF
Sbjct: 2 ATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G + HVYN+GT +ER V+DVA DI LF ++P+ TI YV++RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTD---SCGNDD-------- 356
W E+T WEEGL+ T+EWY +NP WWGDV+GAL PHP ++++ S G+D+
Sbjct: 302 WCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQ 361
Query: 357 AFFLHNGYEI-C-GRSR-LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLD 413
F + + C G R LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+ SL+
Sbjct: 362 TFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIA 421
Query: 414 DMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATG 473
D++ ++P+HV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MNFATG
Sbjct: 422 DIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATG 481
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQV 533
CI+EYD+ HP+GS IGFKE+D+PNFT SFYSKTKAMV
Sbjct: 482 CIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMV----------------------- 518
Query: 534 EGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593
E LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMT+LDE+LPI+IEMA
Sbjct: 519 EELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMA 578
Query: 594 RRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653
+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNFNLEEQAKV+VAPRSNN MD K
Sbjct: 579 KRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAK 638
Query: 654 LKKEFPEVLSIKDSIIKYVLEPNKK 678
L KEFPE+LSIKDS+IKYV EPNK+
Sbjct: 639 LSKEFPEMLSIKDSLIKYVFEPNKR 663
|
|
| TAIR|locus:2024902 MUM4 "MUCILAGE-MODIFIED 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2579 (912.9 bits), Expect = 3.8e-268, P = 3.8e-268
Identities = 482/689 (69%), Positives = 571/689 (82%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
+ +YKPK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS LKNL PS +SPNF
Sbjct: 2 DDTTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNF 61
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF+KGDI DL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK
Sbjct: 62 KFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 121
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+TGQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGL
Sbjct: 122 VTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 181
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P ITTRGNNVYGPNQFPEK+IPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+L
Sbjct: 182 PVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 241
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR 305
H+G IGHVYNVGTK+ER V+DVA DIC LF +PE +I +V++RPFND RYFLDDQKLK+
Sbjct: 242 HKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKK 301
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVIL-----LTD--------SC 352
LGW+E+T WE+GLK T++WY +NP WWGDV+GAL PHP +++ L+D S
Sbjct: 302 LGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS 361
Query: 353 GNDDAFFL---HNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKN 409
F + NG + ++ LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+
Sbjct: 362 NTVQTFTVVTPKNG-DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRA 420
Query: 410 SLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMN 469
SL+ D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MN
Sbjct: 421 SLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMN 480
Query: 470 FATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLI 529
FATGCI+EYD+ HP+GS IGFKE+D+PNF SFYSKTKAMV
Sbjct: 481 FATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMV------------------- 521
Query: 530 NFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589
E LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVV+IPNSMTVLDE+LPI+
Sbjct: 522 ----EELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPIS 577
Query: 590 IEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHM 649
IEMA+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNF +EEQAKV+VA RSNN M
Sbjct: 578 IEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEM 637
Query: 650 DVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
D +KL KEFPE+LSIK+S++KYV EPNK+
Sbjct: 638 DGSKLSKEFPEMLSIKESLLKYVFEPNKR 666
|
|
| TAIR|locus:2015489 NRS/ER "nucleotide-rhamnose synthase/epimerase-reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 607 (218.7 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 110/146 (75%), Positives = 131/146 (89%)
Query: 533 VEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592
VE LLK YENVCTLR+RMPISSDL+NPRNF+TK+ARY KVV+IPNSMT+LDE+LPI+IEM
Sbjct: 151 VEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVDIPNSMTILDELLPISIEM 210
Query: 593 ARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652
A+RN G +NFTNPGV+SHNEILE+Y++YIDP W NF LEEQAKV+VAPRSNN +D T
Sbjct: 211 AKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDAT 270
Query: 653 KLKKEFPEVLSIKDSIIKYVLEPNKK 678
KLK EFPE++SIK+S+IK+V EPNKK
Sbjct: 271 KLKTEFPELMSIKESLIKFVFEPNKK 296
|
|
| MGI|MGI:1923605 Tgds "TDP-glucose 4,6-dehydratase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 173/343 (50%), Positives = 227/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YPDY IV LDKLDYC+SLKNL P N+K
Sbjct: 13 PGSFA-KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYE 131
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 132 AG-VEKFIYVSTDEVYGGSLDQEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY ADV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SV+ +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 TKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGWK K PWEEG+K T+EWY+KN H W + AL P P
Sbjct: 307 EKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
|
|
| DICTYBASE|DDB_G0279465 tgds "putative dTDP-D-glucose 4,6-dehydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 701 (251.8 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 143/270 (52%), Positives = 183/270 (67%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KILITG AGFIGSH+ L K + + +I+ LDKLDYCS++ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
++L+ + E ID ++H AA THVDNSF S +FT NNI GTH LLE CK ++K+
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 133 FIHVSTDEVYGETDMESDIGNP--------EASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
FI+VSTDEVYG +E + N E S L PTNPYSA+KAGAE LV +Y++S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LP I TR NN+YGP Q+PEK+IPKFI L + ++ IHG G N R+YLY D+ AFD+I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTL 274
L +G IG+VYN+GT E S LDVA I +
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI 278
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| RGD|1306544 Tgds "TDP-glucose 4,6-dehydratase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 169/343 (49%), Positives = 228/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YP+Y I+ LDKLDYC+SLKNL P N+K
Sbjct: 13 PGSFA-KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L SE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+
Sbjct: 72 FIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-Y 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDQEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY ADV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SV+ +A ++ L K E E+ + YV DRP ND RY +
Sbjct: 247 TKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGWK K PWEEG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHSLGWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
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| UNIPROTKB|F1RP60 TGDS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 168/343 (48%), Positives = 226/343 (65%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YP+Y IV LDKLDYC+SLKNL N+K
Sbjct: 13 PNSFA-KRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVLL A
Sbjct: 72 FIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGW+ K PW+EG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
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| UNIPROTKB|E2QWQ8 TGDS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 165/343 (48%), Positives = 228/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P+S+ K++L+TG AGFI SHV L+++YP+Y I+ LDKLDYC+SLKNL N+K
Sbjct: 13 PSSFA-KRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L
Sbjct: 187 PAVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K++ LGW+ K PW+EG+K T++WY++N H W + AL P P
Sbjct: 307 EKIQGLGWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEPFP 349
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| UNIPROTKB|A6QLW2 TGDS "dTDP-D-glucose 4,6-dehydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 165/343 (48%), Positives = 225/343 (65%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SH+ L+++YP+Y I+ LDKLDYC+SLKNL N+K
Sbjct: 13 PDSFA-KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWEQYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG G R++LY DV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGW+ K PW+EG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SYM5 | RHM1_ARATH | 4, ., 2, ., 1, ., - | 0.7086 | 0.9473 | 0.9686 | yes | no |
| Q9LH76 | RHM3_ARATH | 4, ., 2, ., 1, ., - | 0.7036 | 0.9473 | 0.9759 | no | no |
| Q9LPG6 | RHM2_ARATH | 4, ., 2, ., 1, ., - | 0.7001 | 0.9459 | 0.9700 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 4.2.1.46 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00000750001 | SubName- Full=Chromosome undetermined scaffold_107, whole genome shotgun sequence; (657 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00021053001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (459 aa) | • | • | • | 0.918 | |||||
 | GSVIVG00030060001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (459 aa) | • | • | • | 0.918 | |||||
 | GSVIVG00006740001 | SubName- Full=Putative uncharacterized protein (Chromosome chr2 scaffold_176, whole genome shot [...] (348 aa) | • | • | • | • | 0.911 | ||||
 | GSVIVG00006742001 | SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (349 aa) | • | • | • | • | 0.911 | ||||
 | GSVIVG00001116001 | SubName- Full=Chromosome chr2 scaffold_112, whole genome shotgun sequence; (350 aa) | • | • | • | • | 0.910 | ||||
 | GSVIVG00034877001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (465 aa) | • | • | 0.909 | ||||||
 | GSVIVG00025477001 | RecName- Full=Galactose-1-phosphate uridylyltransferase; EC=2.7.7.12; (332 aa) | • | • | 0.901 | ||||||
 | GSVIVG00001074001 | SubName- Full=Chromosome chr2 scaffold_112, whole genome shotgun sequence; (302 aa) | • | • | • | • | • | 0.900 | |||
 | GSVIVG00032201001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (485 aa) | • | • | 0.899 | ||||||
 | GSVIVG00026764001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (318 aa) | • | • | • | 0.712 | |||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 684 | |||
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 0.0 | |
| PLN02778 | 298 | PLN02778, PLN02778, 3,5-epimerase/4-reductase | 0.0 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 1e-167 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-130 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 1e-119 | |
| PRK10084 | 352 | PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; | 3e-84 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 1e-81 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 3e-67 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-63 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 2e-59 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 3e-58 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-54 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 2e-47 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 3e-46 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 9e-46 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 5e-45 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 2e-42 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 4e-42 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 8e-41 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 8e-41 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-40 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 6e-40 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 5e-38 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 8e-30 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 3e-28 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 1e-25 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 1e-25 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 4e-25 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 5e-25 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 6e-24 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 1e-23 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 9e-23 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 2e-22 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 4e-22 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 7e-22 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 1e-21 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 1e-21 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-21 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 2e-21 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-20 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 5e-20 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 9e-20 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 4e-18 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-17 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 2e-17 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 2e-17 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 3e-17 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 1e-16 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 4e-16 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 4e-16 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 8e-16 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-15 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 1e-15 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 4e-15 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 5e-15 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 1e-13 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-13 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 3e-13 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 7e-13 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 9e-13 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 2e-12 | |
| TIGR03589 | 324 | TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd | 2e-12 | |
| TIGR01472 | 343 | TIGR01472, gmd, GDP-mannose 4,6-dehydratase | 3e-12 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-11 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 1e-11 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 3e-11 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 4e-11 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 8e-11 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 9e-11 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 1e-10 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-10 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 3e-09 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 5e-09 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 4e-08 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 6e-08 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 1e-07 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 2e-07 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 3e-07 | |
| PRK08125 | 660 | PRK08125, PRK08125, bifunctional UDP-glucuronic ac | 7e-07 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 8e-07 | |
| cd05272 | 308 | cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext | 8e-07 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 1e-06 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 2e-06 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-06 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 4e-06 | |
| cd05261 | 248 | cd05261, CAPF_like_SDR_e, capsular polysaccharide | 5e-06 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 7e-06 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 1e-05 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 1e-05 | |
| PLN00016 | 378 | PLN00016, PLN00016, RNA-binding protein; Provision | 2e-05 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 7e-05 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 1e-04 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-04 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 2e-04 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 5e-04 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 8e-04 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 0.001 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 0.002 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 0.002 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 0.003 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 0.003 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 0.004 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 0.004 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 1291 bits (3343), Expect = 0.0
Identities = 499/687 (72%), Positives = 581/687 (84%), Gaps = 38/687 (5%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
A+Y+PK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS+LKNL+PS++SPNFK
Sbjct: 1 MATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK 60
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F+KGDI ADL+NYLL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+
Sbjct: 61 FVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
TGQ++RFIHVSTDEVYGETD ++D+GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHG+GSNVRSYLYC DVAEAF+V+LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+G +GHVYN+GTKKER V+DVA DIC LF L+PEK+I +V++RPFND RYFLDDQKLK+L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKL 300
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYEI 366
GW+E+T WEEGLK T+EWY NP WWGDV+GAL PHP ++++ D + +
Sbjct: 301 GWQERTSWEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGVRLFDGSEEIKLSSSG 360
Query: 367 C---------------GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSL 411
G+ LKFLIYG+TGWIGGLLGK C+ +GIA+E+G GRLED++SL
Sbjct: 361 SQTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSL 420
Query: 412 LDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFA 471
L D++ V+PTHV NAAG+TGRPNVDWCESH+VETIR NV+GTLTLADVC+E +L+MNFA
Sbjct: 421 LADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFA 480
Query: 472 TGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINF 531
TGCI+EYD+ HP+GS IGFKE+D+PNFT SFYSKTKAM
Sbjct: 481 TGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAM---------------------- 518
Query: 532 QVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
VE LL+ Y+NVCTLR+RMPISSDLSNPRNF+TK++RYNKVVNIPNSMTVLDE+LPI+IE
Sbjct: 519 -VEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIE 577
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651
MA+RN RG WNFTNPGV+SHNEILE+YK+YIDP KWSNF LEEQAKV+VAPRSNN MD
Sbjct: 578 MAKRNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDA 637
Query: 652 TKLKKEFPEVLSIKDSIIKYVLEPNKK 678
+KLKKEFPE+LSIK+S+IKYV EPNKK
Sbjct: 638 SKLKKEFPELLSIKESLIKYVFEPNKK 664
|
Length = 668 |
| >gnl|CDD|178377 PLN02778, PLN02778, 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Score = 519 bits (1338), Expect = 0.0
Identities = 214/316 (67%), Positives = 253/316 (80%), Gaps = 23/316 (7%)
Query: 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427
G + LKFLIYGKTGWIGGLLGK C+++GI F +G+GRLE++ SL D+ V+PTHV NAA
Sbjct: 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAA 65
Query: 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSS 487
G+TGRPNVDWCESH+VETIR NV+GTLTLADVC+E+ ++L N+ATGCI+EYD HP GS
Sbjct: 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSG 125
Query: 488 IGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLR 547
IGFKE+D PNFT SFYSKTKAMV E LLK YENVCTLR
Sbjct: 126 IGFKEEDTPNFTGSFYSKTKAMV-----------------------EELLKNYENVCTLR 162
Query: 548 LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPG 607
+RMPISSDLSNPRNF+TK+ RY KVVNIPNSMT+LDE+LPI+IEMA+RN G +NFTNPG
Sbjct: 163 VRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPG 222
Query: 608 VISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPEVLSIKDS 667
V+SHNEILE+Y++YIDP W NF LEEQAKV+VAPRSNN +D TKLK+EFPE+L IK+S
Sbjct: 223 VVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKES 282
Query: 668 IIKYVLEPNKKKNNDM 683
+IKYV EPNKK +
Sbjct: 283 LIKYVFEPNKKTKKAV 298
|
Length = 298 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 481 bits (1241), Expect = e-167
Identities = 158/319 (49%), Positives = 216/319 (67%), Gaps = 5/319 (1%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KIL+TG AGFIGS+ L+ YPDY+I+ LDKL Y +L+NL +SP ++F+KGDI
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A+L++ L E ID ++HFAA++HVD S + F N+ GT+ LLEA + G VKR
Sbjct: 61 CDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYG-VKR 119
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F+H+STDEVYG D+ D E S L PT+PYSA+KA A++LV AYHR+YGLP + TR
Sbjct: 120 FVHISTDEVYG--DLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTYGLPVVITRC 177
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
+N YGP QFPEKLIP FIL A+ G+ LPI+G+G NVR +LY D A A +++L +G +G
Sbjct: 178 SNNYGPYQFPEKLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELVLEKGRVGE 237
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311
+YN+G E + L++ I L + E I YV+DRP +D RY +D K++R LGW+ K
Sbjct: 238 IYNIGGGNELTNLELVKLILELLG-KDESLITYVKDRPGHDRRYAIDSSKIRRELGWRPK 296
Query: 312 TPWEEGLKLTLEWYKKNPH 330
+EEGL+ T+ WY +N
Sbjct: 297 VSFEEGLRKTVRWYLENRW 315
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 388 bits (998), Expect = e-130
Identities = 142/328 (43%), Positives = 204/328 (62%), Gaps = 5/328 (1%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KIL+TG AGFIGS+ ++ +PD +V LDKL Y +L+NL SP ++F++GDI
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+L++ L D ++HFAA++HVD S F N+ GT+ LLEA + R
Sbjct: 61 CDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F H+STDEVYG+ ++ D E + P++PYSA+KA +++LV AY R+YGLP TR
Sbjct: 121 FHHISTDEVYGDLGLDDDAFT-ETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRC 179
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
+N YGP QFPEKLIP I+ A+ G+ LP++G+G +R +LY D A D++L +G IG
Sbjct: 180 SNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239
Query: 253 VYNVGTKKERSVLDVAADICTLF-KLEP--EKTIHYVQDRPFNDHRYFLDDQKLKR-LGW 308
YN+G ER+ L+V IC L K +P I +V+DRP +D RY +D K+KR LGW
Sbjct: 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGW 299
Query: 309 KEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
+ + +E GL+ T++WY N WW +
Sbjct: 300 RPQETFETGLRKTVDWYLDNEWWWEPLK 327
|
Length = 340 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 358 bits (920), Expect = e-119
Identities = 143/320 (44%), Positives = 201/320 (62%), Gaps = 4/320 (1%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+IL+TG AGFIGS+ ++ +PD E++ LDKL Y +L+NL +P ++F+KGDI
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+L++ L D ++HFAA++HVD S F N+ GT+ LLEA + RF
Sbjct: 61 DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
H+STDEVYG D+E E + L P++PYSA+KA ++ LV AYHR+YGLP + TR +
Sbjct: 121 HHISTDEVYG--DLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCS 178
Query: 194 NVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHV 253
N YGP QFPEKLIP I A+ G+ LP++G+G VR +LY D A ++L +G +G
Sbjct: 179 NNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGET 238
Query: 254 YNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT 312
YN+G ER+ L+V I L + E I +V+DRP +D RY +D K+KR LGW K
Sbjct: 239 YNIGGGNERTNLEVVETILELLG-KDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKY 297
Query: 313 PWEEGLKLTLEWYKKNPHWW 332
+EEGL+ T++WY N WW
Sbjct: 298 TFEEGLRKTVQWYLDNEWWW 317
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 3e-84
Identities = 142/340 (41%), Positives = 191/340 (56%), Gaps = 23/340 (6%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG AGFIGS V +I N D +V +DKL Y +L++L S + F DI
Sbjct: 2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
++ + D +MH AA++HVD S F NI GT+VLLEA + L
Sbjct: 61 DRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDE 120
Query: 129 QVK---RFIHVSTDEVYGETDMESDIGNPEASQLL-------PTNPYSATKAGAEMLVMA 178
K RF H+STDEVYG+ ++ N E L P++PYSA+KA ++ LV A
Sbjct: 121 DKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT-----IHYVQDRPFN 292
A ++ G G YN+G E+ LDV IC L ++ P+ T I YV DRP +
Sbjct: 241 RALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHW 331
D RY +D K+ R LGWK + +E G++ T+EWY N W
Sbjct: 301 DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTEW 340
|
Length = 352 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 1e-81
Identities = 143/342 (41%), Positives = 189/342 (55%), Gaps = 21/342 (6%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KILITG AGFIGS + +I D +V +DKL Y +L +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LT 127
+ + D +MH AA++HVD S F NI GT+ LLEA + LT
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 128 GQVK---RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
K RF H+STDEVYG+ D E + P++PYSA+KA ++ LV A+ R+YG
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFT-ETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LPT+ T +N YGP FPEKLIP IL A+ G+ LP++GNG +R +LY D A A +
Sbjct: 180 LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT---------IHYVQDRPFNDH 294
G +G YN+G ER LDV IC L +L P K I +V DRP +D
Sbjct: 240 ATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDL 299
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV 335
RY +D K+ R LGW + +E G++ T++WY N WW V
Sbjct: 300 RYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
|
Length = 355 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 222 bits (569), Expect = 3e-67
Identities = 119/322 (36%), Positives = 170/322 (52%), Gaps = 28/322 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++L+TG AGFIGSH+ RL++ +E++ LD L +NL + PN KF++GDI
Sbjct: 1 RVLVTGGAGFIGSHLVERLLER--GHEVIVLDNLS-TGKKENLPEVK--PNVKFIEGDIR 55
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTN-NNIYGTHVLLEACKLTGQVKR 132
+L+ + EG+D + H AAQ V S + + N+ GT LLEA + VKR
Sbjct: 56 DDELVEFAF--EGVDYVFHQAAQASVPRSIEDP-IKDHEVNVLGTLNLLEAAR-KAGVKR 111
Query: 133 FIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
F++ S+ VYG+ E NP +PY+ +K E+ + R YGLPT+
Sbjct: 112 FVYASSSSVYGDPPYLPKDEDHPPNPL-------SPYAVSKYAGELYCQVFARLYGLPTV 164
Query: 189 TTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
+ R NVYGP Q P +IP FI A+KG+ I+G+G R + Y DV EA +
Sbjct: 165 SLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLA 224
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK 304
G G VYN+GT K SV ++A I + L E Y RP + D K K
Sbjct: 225 ATAGAGGEVYNIGTGKRTSVNELAELIREI--LGKELEPVYAPPRPGDVRHSLADISKAK 282
Query: 305 R-LGWKEKTPWEEGLKLTLEWY 325
+ LGW+ K +EEGL+LT+EW+
Sbjct: 283 KLLGWEPKVSFEEGLRLTVEWF 304
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 3e-63
Identities = 109/327 (33%), Positives = 158/327 (48%), Gaps = 27/327 (8%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRAS--PNFKFLKG 70
+IL+TG AGFIGSH+ RL+ +++ LD L +F+
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAA--GHDVRGLD---------RLRDGLDPLLSGVEFVVL 49
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNS-FGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+T DL++ L D ++H AAQ+ V +S + EF + N+ GT LLEA + G
Sbjct: 50 DLTDRDLVD-ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG- 107
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
VKRF+ S+ V I + + P NPY +K AE L+ AY R YGLP +
Sbjct: 108 VKRFVFASSVSVVYGDPPPLPI-DEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVI 166
Query: 190 TRGNNVYGPNQFPEK---LIPKFILLAMKGQQLP-IHGNGSNVRSYLYCADVAEAFDVIL 245
R NVYGP P+ ++ FI +KG+ + I G+GS R ++Y DVA+A + L
Sbjct: 167 LRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226
Query: 246 HRGVIGHVYNVGT-KKERSVLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQK 302
G V+N+G+ E +V ++A + + I Y+ R LD K
Sbjct: 227 ENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPL-IVYIPLGRRGDLREGKLLDISK 284
Query: 303 LKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ LGW+ K EEGL TLEW K
Sbjct: 285 ARAALGWEPKVSLEEGLADTLEWLLKK 311
|
Length = 314 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 2e-59
Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 21/326 (6%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+L+TGA GFIGSH+T RL++ +E+ ALD + +S L + F F+ GD+
Sbjct: 1 NVLVTGADGFIGSHLTERLLRE--GHEVRALDIYNSFNS-WGLLDNAVHDRFHFISGDVR 57
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGT-HVLLEACKLTGQVKR 132
A + YL+ + D + H AA + S+ + N++GT +VL AC L KR
Sbjct: 58 DASEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVL--YRKR 113
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTN----PYSATKAGAEMLVMAYHRSYGLPTI 188
+H ST EVYG D+ E LL N PYSA+K GA+ L +Y RS+GLP
Sbjct: 114 VVHTSTSEVYG---TAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVT 170
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILHR 247
R N YGP Q +IP I GQ+L G+GS R + + D A F D++
Sbjct: 171 IIRPFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAI 230
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH--YVQDRPFNDH--RYFLDDQKL 303
+G + N G+ +E S+ + A ++ E ++ + + RP R D +K
Sbjct: 231 EAVGEIINNGSGEEISIGNPAVELIVEELGEMVLIVYDDHREYRPGYSEVERRIPDIRKA 290
Query: 304 KR-LGWKEKTPWEEGLKLTLEWYKKN 328
KR LGW+ K +GL+ T+EW+K
Sbjct: 291 KRLLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 3e-58
Identities = 92/246 (37%), Positives = 132/246 (53%), Gaps = 16/246 (6%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG GFIGSH+ RL++ YE++ L + S + +F +GD+T
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQE--GYEVIVL-------GRRRRSESLNTGRIRFHEGDLTD 51
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
D + LL D ++H AAQ+ V SF + +F N+ GT LLEA + G VKRF+
Sbjct: 52 PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFV 110
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
S+ EVYG+ D E + L P +PY+A K AE LV AY R+YGL + R N
Sbjct: 111 FASSSEVYGDVA---DPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFN 167
Query: 195 VYGP---NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
VYGP + F +IP I ++G+ + + G+G+ R +LY DVA A + L G
Sbjct: 168 VYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGG 227
Query: 252 HVYNVG 257
+YN+G
Sbjct: 228 EIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 5e-54
Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 49/246 (19%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG AGFIGSH+ RL++ +E+V +D+LD
Sbjct: 1 ILVTGGAGFIGSHLVRRLLER--GHEVVVIDRLDV------------------------- 33
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
++H AA V S+ N E N+ GT LLEA + G VKRF+
Sbjct: 34 ---------------VVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFV 77
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
+ S+ VYG + + E + P +PY +K AE L+ +Y SYGLP + R N
Sbjct: 78 YASSASVYGSPE---GLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLAN 134
Query: 195 VYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
VYGP Q P + ++ FI A++G+ L + G G+ R +++ DV A L + G
Sbjct: 135 VYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGG 194
Query: 253 -VYNVG 257
VYN+G
Sbjct: 195 GVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 2e-47
Identities = 70/321 (21%), Positives = 120/321 (37%), Gaps = 67/321 (20%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR---------LEDKNSLLDDMKRVRPTHV 423
K LI G TG +G L + K++G GTGR L D +++ + ++ +P +
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEV-IGTGRSRASLFKLDLTDPDAVEEAIRDYKPDVI 59
Query: 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHP 483
+N A T + R NV+ LA KE L++ +T ++
Sbjct: 60 INCAAYTRVDKCESDPE---LAYRVNVLAPENLARAAKEVGARLIHISTDYVF------- 109
Query: 484 QGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENV 543
G +KE+D PN + Y K+K + E+ V L A
Sbjct: 110 DGKKGPYKEEDAPNPL-NVYGKSKLLG------EVAV----------------LNANPRY 146
Query: 544 CTLRLRMPISSDLSNPRNFVTKLAR-------YNKVVNIPNSMTVLDEMLPIAIEMA-RR 595
LR L N NFV + R N V + S T ++ +E+ R
Sbjct: 147 LILRTSWLYGE-LKNGENFVEWMLRLAAERKEVNVVHDQIGSPTYAADLADAILELIERN 205
Query: 596 NCRGAWNFTNPGVISHNEILELYKE-------YIDPQLKWSNFNLEEQAKVLVAPRSNNH 648
+ G ++ +N G IS E +L + I P + + +N+
Sbjct: 206 SLTGIYHLSNSGPISKYEFAKLIADALGLPDVEIKP-------ITSSEYPLPARRPANSS 258
Query: 649 MDVTKLKKEF-PEVLSIKDSI 668
+D +KL++ + K+++
Sbjct: 259 LDCSKLEELGGIKPPDWKEAL 279
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 3e-46
Identities = 100/351 (28%), Positives = 150/351 (42%), Gaps = 52/351 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN---LHPSRASPNFKFLK 69
++LITG AGFIGS++ +K +E++ D L S N L +R +F+
Sbjct: 1 MRVLITGGAGFIGSNLARFFLKQ--GWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVH 58
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI + + + E ID I+H AAQ V S + N GT +LEA +
Sbjct: 59 GDIR--NRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAP 116
Query: 130 VKRFIHVSTDEVYG-----------ETDMESDI------GNPEASQLLPT-NPYSATKAG 171
FI ST++VYG ET E G E+ L + + Y A+K
Sbjct: 117 NAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGA 176
Query: 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL---IPKFILLAMKGQQLPIHGNG-SN 227
A+ V Y R +GL T+ R + GP QF + + F+ A+ G+ L I G G
Sbjct: 177 ADQYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQ 236
Query: 228 VRSYLYCADVAEAFDV----ILHRGVIGHVYNVGTKKERSV-----LDVAADICTLFKLE 278
VR L+ AD+ + R G V+N+G +E SV + + +I
Sbjct: 237 VRDVLHSADLVNLYLRQFQNPDRRK--GEVFNIGGGRENSVSLLELIALCEEITG----- 289
Query: 279 PEKTIHYVQD--RPFNDHRYF-LDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325
+ + +D RP D ++ D +K+K GWK + E L W
Sbjct: 290 --RKMESYKDENRPG-DQIWYISDIRKIKEKPGWKPERDPREILAEIYAWI 337
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 9e-46
Identities = 106/343 (30%), Positives = 159/343 (46%), Gaps = 38/343 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLK--NLHPSRASPNFKFL 68
KIL+TGAAGFIG HV RL++ E+V +D L+ Y LK L S FKF+
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLER--GDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFV 58
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
KGD+ + + L D ++H AAQ V S N + ++NI G LLE C+
Sbjct: 59 KGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCR-HF 117
Query: 129 QVKRFIHVSTDEVYG-ETDM---ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
VK ++ S+ VYG T M E D + P + Y+ATK E++ Y YG
Sbjct: 118 GVKHLVYASSSSVYGLNTKMPFSEDDRVDH------PISLYAATKKANELMAHTYSHLYG 171
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA---- 240
+PT R VYGP P+ + F ++G+ + + +G+ R + Y D+ E
Sbjct: 172 IPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVVRA 231
Query: 241 ----------FDVILHRGVIGH----VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV 286
+D VYN+G ++D + + +K +Y+
Sbjct: 232 LDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKALGKKAKK--NYL 289
Query: 287 QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ + + D KL+R LG+K KT EEG+K +EWYK+N
Sbjct: 290 PMQKGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWYKEN 332
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 5e-45
Identities = 99/327 (30%), Positives = 164/327 (50%), Gaps = 35/327 (10%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+ +RL+++ +E++ +D + +N+ PNF+F++ D+
Sbjct: 1 KRILITGGAGFLGSHLCDRLLED--GHEVICVDNF-FTGRKRNIEHLIGHPNFEFIRHDV 57
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
T L + +D I H A + N + N+ GT +L K G R
Sbjct: 58 T-----EPLYLE--VDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVG--AR 108
Query: 133 FIHVSTDEVYGETDM----ESDIGNPEASQLLPTNP------YSATKAGAEMLVMAYHRS 182
+ ST EVYG+ ++ ES GN NP Y K AE L MAYHR
Sbjct: 109 VLLASTSEVYGDPEVHPQPESYWGN--------VNPIGPRSCYDEGKRVAETLCMAYHRQ 160
Query: 183 YGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
+G+ R N YGP P +++ FI+ A++G+ + ++G+G+ RS+ Y +D+ E
Sbjct: 161 HGVDVRIARIFNTYGPRMHPNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLVEG 220
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300
+++ G N+G +E ++L++A + L + I ++ + R D
Sbjct: 221 LIRLMNSDYFGGPVNLGNPEEFTILELAELVKKLTG--SKSEIVFLPLPEDDPKRRRPDI 278
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEWYK 326
K K LGW+ K P EEGL+ T+E+++
Sbjct: 279 SKAKELLGWEPKVPLEEGLRRTIEYFR 305
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 2e-42
Identities = 98/321 (30%), Positives = 149/321 (46%), Gaps = 32/321 (9%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG AGFIGSH+ +RL++ E+V +D L +N+ P + F+F+K D+
Sbjct: 2 ILVTGGAGFIGSHLVDRLLEE--GNEVVVVDNL-SSGRRENIEPEFENKAFRFVKRDLL- 57
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ + DT+ H AA V + N+ T+ +LEA + G VKR +
Sbjct: 58 --DTADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRIV 114
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
S+ VYGE + I PE LP + Y A+K AE L+ AY +G R N
Sbjct: 115 FASSSTVYGEAKV---IPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFAN 171
Query: 195 VYGPNQFPEKLIPKFIL-LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH------R 247
+ GP +I FI L +L + G+G +SYLY V++ D +L
Sbjct: 172 IVGPRS-THGVIYDFINKLKRNPNELEVLGDGRQRKSYLY---VSDCVDAMLLAWEKSTE 227
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH-----YVQDRPFNDHRYFLDDQK 302
GV +++N+G SV ++A + L+P + D P LD +K
Sbjct: 228 GV--NIFNLGNDDTISVNEIAEIVIEELGLKPRFKYSGGDRGWKGDVP----YMRLDIEK 281
Query: 303 LKRLGWKEKTPWEEGLKLTLE 323
LK LGWK + EE ++ T+
Sbjct: 282 LKALGWKPRYNSEEAVRKTVR 302
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 4e-42
Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 36/336 (10%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+L+TG AG+IGSH L++ Y++V LD L + + P +F +GDI
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEA--GYDVVVLDNL--SNGHREALPRIEKIRIEFYEGDIR 56
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
++ + ID ++HFAA V S ++ +NN+ GT LLEA + G VK F
Sbjct: 57 DRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHG-VKNF 115
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ S+ VYGE + E + L PTNPY TK E ++ ++ GL + R
Sbjct: 116 VFSSSAAVYGEPETVPI---TEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILRYF 172
Query: 194 NVYG--PN-------QFPEKLIPKFILLAMKGQ--QLPIHGN------GSNVRSYLYCAD 236
N G P+ Q P LIP ++L G+ +L I G+ G+ VR Y++ D
Sbjct: 173 NPAGAHPSGLIGEDPQIPNNLIP-YVLQVALGRREKLAIFGDDYPTPDGTCVRDYIHVVD 231
Query: 237 VAEA-FDVI--LHRGVIGHVYNVGTKKERSVLDV--AADICTLFKLEPEKTIHYVQDRPF 291
+A+A + L G +YN+GT + SVL+V A + + + P + R
Sbjct: 232 LADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSGKPI-PYE---IAPRRAG 287
Query: 292 NDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYK 326
+ D K + LGWK K E+ + W
Sbjct: 288 DPASLVADPSKAREELGWKPKRDLEDMCEDAWNWQS 323
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 8e-41
Identities = 93/310 (30%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDK---------LDYCSSLKNLHPSRASPNF 65
+L+TGA GFIGSH+ L++ YE+ A LD P
Sbjct: 1 VLVTGADGFIGSHLVEALVRQ--GYEVRAFVLYNSFNSWGWLDTS-------PPEVKDKI 51
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
+ + GDI D + + +G D + H AA + S+ + + N+ GT +L+A +
Sbjct: 52 EVVTGDIRDPDSVRKAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAAR 109
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G V++ +H ST EVYG T I E L +PYSA+K GA+ L ++++RS+
Sbjct: 110 DLG-VEKVVHTSTSEVYG-TAQYVPI--DEKHPLQGQSPYSASKIGADQLALSFYRSFNT 165
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P R N YGP Q +IP I G++ G+ S R + Y D F I
Sbjct: 166 PVTIIRPFNTYGPRQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIA 225
Query: 246 -HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH--RYFLDDQK 302
+G V N+G+ E S+ D I + E E + RP R + D+ K
Sbjct: 226 ESDKTVGEVINIGSNFEISIGDTVKLIAEIMGSEVEIETDEERLRPEKSEVERLWCDNSK 285
Query: 303 LKRL-GWKEK 311
+K L GW+ K
Sbjct: 286 IKELTGWQPK 295
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 8e-41
Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 40/340 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+L+TG AG+IGSH +L+K +E+V LD L L + KF +GD+
Sbjct: 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSN-GHKIALLKLQF----KFYEGDL 53
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
L+ + ID ++HFAA V S N ++ +NN+ GT L+EA TG VK+
Sbjct: 54 LDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKK 112
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
FI ST VYGE S I E S L P NPY +K +E ++ ++ + R
Sbjct: 113 FIFSSTAAVYGEPT-TSPI--SETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRY 169
Query: 193 NNVYGPN------QFPEK---LIPKFILLAMKGQ--QLPIHGN------GSNVRSYLYCA 235
NV G Q LIP A G+ +L I G+ G+ +R Y++
Sbjct: 170 FNVAGACPDGTLGQRYPGATLLIP-VAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVD 228
Query: 236 DVAE----AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLE-PEKTIHYVQDRP 290
D+A+ A L G +++N+G+ SVL+V + + P + R
Sbjct: 229 DLADAHVLALKY-LKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP---VEIAPRRA 284
Query: 291 FNDHRYFLDDQKLKR-LGWK-EKTPWEEGLKLTLEWYKKN 328
+ D K ++ LGW+ E+ +K +W+++
Sbjct: 285 GDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQR 324
|
Length = 329 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-40
Identities = 107/342 (31%), Positives = 154/342 (45%), Gaps = 41/342 (11%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFLKGD 71
KIL+TG AG+IGSH +L+++ +E+V LD L +L F++GD
Sbjct: 1 KILVTGGAGYIGSHTVRQLLES--GHEVVILDNLSNGSREALPRGERITP---VTFVEGD 55
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ +L++ L ID ++HFA V S ++ NN+ GT LLEA + G VK
Sbjct: 56 LRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VK 114
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-YGLPTITT 190
+FI S+ VYGE I E S L P NPY +K +E ++ ++ +
Sbjct: 115 KFIFSSSAAVYGEP-SSIPI--SEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVIL 171
Query: 191 RGNNVYG----------PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLY 233
R NV G P LIP +A+ K +L I G G+ VR Y++
Sbjct: 172 RYFNVAGAHPSGDIGEDPPGITH-LIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH 230
Query: 234 CADVAEAFDVI---LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD-- 288
D+A+A L G HVYN+G + SVL+V FK K
Sbjct: 231 VMDLADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVI----EAFKKVSGKDFPVELAPR 286
Query: 289 RPFNDHRYFLDDQKLKR-LGWKEK-TPWEEGLKLTLEWYKKN 328
RP + D K++R LGW+ K T EE +K W +N
Sbjct: 287 RPGDPASLVADASKIRRELGWQPKYTDLEEIIKDAWRWESRN 328
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 6e-40
Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 34/322 (10%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF---KFLKG 70
++LI G GFIGSH+ + L++ P ++ D+ ++KG
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGP--QVRVFDR----------SIPPYELPLGGVDYIKG 48
Query: 71 DI-TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D ADL + L GIDT++H A+ T+ S N N+ T LLEAC G
Sbjct: 49 DYENRADLESAL---VGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAG- 104
Query: 130 VKRFIHVSTD-EVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+ + I S+ VYG + E+ LP + Y +K E + Y YGL
Sbjct: 105 IGKIIFASSGGTVYGVPEQLP---ISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYT 161
Query: 189 TTRGNNVYGPNQFPEK---LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
R +N YGP Q P+ +IP + ++G+ + I G+G ++R Y+Y D+ EA +L
Sbjct: 162 VLRISNPYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALL 221
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKL--EPEKTIHYVQDRPFNDHRYFLDDQKL 303
+ V+N+G+ S+ ++ I + K+ + I+ R + + LD +
Sbjct: 222 RSKGLEEVFNIGSGIGYSLAEL---IAEIEKVTGRSVQVIYT-PARTTDVPKIVLDISRA 277
Query: 304 KR-LGWKEKTPWEEGLKLTLEW 324
+ LGW K E+GL+ T +W
Sbjct: 278 RAELGWSPKISLEDGLEKTWQW 299
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 5e-38
Identities = 84/324 (25%), Positives = 134/324 (41%), Gaps = 26/324 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN----LHPSRASPNFKFLK 69
+ LITG G GS++ L++ YE+ + + SS N H
Sbjct: 1 RALITGITGQDGSYLAEFLLEK--GYEVHGIVRR---SSSFNTDRIDHLYINKDRITLHY 55
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GD+T + + + D I H AAQ+HV SF + N GT LLEA ++ G
Sbjct: 56 GDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGL 115
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
RF S+ E YG+ ++ E + P +PY+ +K A+ + Y +YGL +
Sbjct: 116 DARFYQASSSEEYGKVQ---ELPQSETTPFRPRSPYAVSKLYADWITRNYREAYGLFAVN 172
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMK---GQQLPIH-GNGSNVRSYLYCADVAEAFDVIL 245
R N GP + + K + G Q + GN R + D EA+ ++L
Sbjct: 173 GRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVEAYWLLL 232
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD----RPFNDHRYFL-DD 300
+G Y + T + SV + ++ + I D RP + L D
Sbjct: 233 QQG-EPDDYVIATGETHSVREF-VELA-FEESGLTGDIEVEIDPRYFRP-TEVDLLLGDP 288
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLE 323
K + LGWK + +EE ++ L+
Sbjct: 289 SKAREELGWKPEVSFEELVREMLD 312
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 8e-30
Identities = 94/337 (27%), Positives = 144/337 (42%), Gaps = 43/337 (12%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
++ L+TGA GFIGSH+ RL + + D S P+ +F D+
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAE--GHYVRGADWK---SPEHMTQPTDDD---EFHLVDL 52
Query: 73 TCADLMNYLLVSEGIDTIMHFAA---------QTHVDNSFGNSFEFTNNNIYGTHVLLEA 123
++ N L +EG+D + H AA H + N+ N N +LEA
Sbjct: 53 R--EMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNT--LINFN------MLEA 102
Query: 124 CKLTGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAY 179
++ G V+RF+ S+ VY E +E+ + P P Y K E L Y
Sbjct: 103 ARING-VERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHY 161
Query: 180 HRSYGLPTITTRGNNVYGP----NQFPEKLIPKF---ILLAMKGQQLPIHGNGSNVRSYL 232
+ YG+ T R +N+YGP + EK + A G + I G+G RS+
Sbjct: 162 NEDYGIETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFT 221
Query: 233 YCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN 292
Y D E L G N+G+ + S+ ++A + + F +P + IH+ P
Sbjct: 222 YIDDCVEGL-RRLMESDFGEPVNLGSDEMVSMNELAEMVLS-FSGKPLEIIHHT-PGPQG 278
Query: 293 DHRYFLDDQKLK-RLGWKEKTPWEEGLKLTLEWYKKN 328
D+ LK LGW+ TP EEGL++T W K+
Sbjct: 279 VRGRNSDNTLLKEELGWEPNTPLEEGLRITYFWIKEQ 315
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 35/340 (10%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
++ K++L+TG GF GS ++ L + +LD + + + +
Sbjct: 2 WQGKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNK---ISSTR 58
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI + + + + + H AAQ V S+ + E N+ GT LLEA + TG
Sbjct: 59 GDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGS 118
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI- 188
VK ++V++D+ Y + E G E L +PYS++K AE+++ +Y S+ P
Sbjct: 119 VKAVVNVTSDKCYE--NKEWGWGYRENDPLGGHDPYSSSKGCAELIISSYRNSFFNPENY 176
Query: 189 --------TTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD--- 236
+ R NV G + E +++P I G+++ I + +R + + +
Sbjct: 177 GKHGIAIASARAGNVIGGGDWAEDRIVPDCIRAFEAGERVIIRNPNA-IRPWQHVLEPLS 235
Query: 237 ----VAEAFDVILHRGVI--GHVYNVGTKKE--RSVLDVAADICTLFKLEPEKTIHYVQD 288
+AE L+ +N G E +VL++ + + + +
Sbjct: 236 GYLLLAEK----LYERGEEYAEAWNFGPDDEDAVTVLELVEAMARYWGEDARW--DLDGN 289
Query: 289 RPFNDHRYF-LDDQKLK-RLGWKEKTPWEEGLKLTLEWYK 326
++ LD K K LGW+ + EE L+ T+ WYK
Sbjct: 290 SHPHEANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWYK 329
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 104/357 (29%), Positives = 151/357 (42%), Gaps = 50/357 (14%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA-----S 62
S + IL+TG AG+IGSH +L+ Y++V +D LD SS + L +
Sbjct: 1 MSLMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDN-SSEEALRRVKELAGDLG 57
Query: 63 PNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLE 122
N F K D+ + + + S D ++HFA V S + +NN+ GT LLE
Sbjct: 58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLE 117
Query: 123 ACKLTGQVKRFIHVSTDEVYGETDMESDIGNP--EASQLLPTNPYSATKAGAEMLVMAYH 180
G K+ + S+ VYG+ + P E L TNPY TK E + H
Sbjct: 118 VMAKHG-CKKLVFSSSATVYGQPEEV-----PCTEEFPLSATNPYGRTKLFIEEICRDIH 171
Query: 181 RSYGL-PTITTRGNNVYG----------PNQFPEKLIPKFILLAMKGQQ--LPIHGN--- 224
S I R N G P P L+P ++ G++ L + GN
Sbjct: 172 ASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYP 230
Query: 225 ---GSNVRSYLYCADVAE----AFDVILHRGVIG-HVYNVGTKKERSVLD-VAADICTLF 275
G+ VR Y++ D+A+ A + IG YN+GT K SVL+ VAA F
Sbjct: 231 TKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAA-----F 285
Query: 276 KLEPEKTIHYVQD--RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329
+ K I RP + + +K ++ LGWK K +E + W KNP
Sbjct: 286 EKASGKKIPLKLAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342
|
Length = 352 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 1e-25
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 40/289 (13%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD----KLDYCSSLKNLHPSRASPNFKFL 68
K IL+TG AG IGS + +++K P +++ D KL ++ L +F+
Sbjct: 3 KTILVTGGAGSIGSELVRQILKFGP-KKLIVFDRDENKLH--ELVRELRSRFPHDKLRFI 59
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
GD+ + + G D + H AA HV + N E N+ GT +++A G
Sbjct: 60 IGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENG 119
Query: 129 QVKRFIHVSTDE-VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
V++F+ +STD+ V P N ATK AE L++A +
Sbjct: 120 -VEKFVCISTDKAVN------------------PVNVMGATKRVAEKLLLAKNEYSSSTK 160
Query: 188 ITT-RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
+T R NV G ++P F KG L + ++ + + EA D++L
Sbjct: 161 FSTVRFGNVLGSRG---SVLPLFKKQIKKGGPLTV--TDPDMTRFFM--TIPEAVDLVLQ 213
Query: 247 ---RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK--TIHYVQDRP 290
G G ++ + +LD+A + L EP + I + RP
Sbjct: 214 ACILGDGGGIFLLDMGPPVKILDLAEALIELLGYEPYEDIPIFFTGLRP 262
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 79/319 (24%), Positives = 128/319 (40%), Gaps = 52/319 (16%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITGA G +G + L + YE++ + K D+T
Sbjct: 1 KILITGATGMLGRALVRLLKER--GYEVIGTGR----------------SRASLFKLDLT 42
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
D + + D I++ AA T VD + N+ L A K G R
Sbjct: 43 DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVG--ARL 100
Query: 134 IHVSTDEVY-GETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
IH+STD V+ G+ E D N P N Y +K E+ V+ + Y +
Sbjct: 101 IHISTDYVFDGKKGPYKEEDAPN-------PLNVYGKSKLLGEVAVLNANPRY----LIL 149
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN--VRSYLYCADVAEA-FDVILHR 247
R + +YG + E + + LA + +++ N + + S Y AD+A+A ++I
Sbjct: 150 RTSWLYGELKNGENFVEWMLRLAAERKEV----NVVHDQIGSPTYAADLADAILELIERN 205
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLF-----KLEPEKTIHY--VQDRPFNDHRYFLDD 300
+ G +Y++ S + A I +++P + Y RP N LD
Sbjct: 206 SLTG-IYHLSNSGPISKYEFAKLIADALGLPDVEIKPITSSEYPLPARRPANSS---LDC 261
Query: 301 QKLKRLGWKEKTPWEEGLK 319
KL+ LG + W+E L+
Sbjct: 262 SKLEELGGIKPPDWKEALR 280
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 5e-25
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 44/351 (12%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK---FLKG 70
++L+TG +G+IGSH +L++N +++V LD L C+S +++ P K F++G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEG 57
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI L+ +L IDT++HFA V S E+ +NN+ GT L+ A + V
Sbjct: 58 DIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-V 116
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
K I S+ VYG+ + I E+ P +PY +K E ++ ++ +I
Sbjct: 117 KNLIFSSSATVYGD---QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 190 T-RGNNVYG----------PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSY 231
R N G P P L+P +A+ + L I GN G+ VR Y
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233
Query: 232 LYCADVAE----AFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTI--H 284
++ D+A+ A + + ++ GV H+YN+G SVLDV F K + H
Sbjct: 234 IHVMDLADGHVAAMEKLANKPGV--HIYNLGAGVGSSVLDVVN----AFSKACGKPVNYH 287
Query: 285 YVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGD 334
+ R + Y+ D K R L W+ +E + T W ++P + D
Sbjct: 288 FAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
Length = 338 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 55/333 (16%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG G +GS + L + +V + D+T
Sbjct: 1 KILVTGHRGLVGSAIVRVLARR-GYENVVFRTSKEL---------------------DLT 38
Query: 74 CADLMNYLLVSEGIDTIMHFAAQT---HVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ + E D ++H AA+ + ++ F +N + +V+ A G V
Sbjct: 39 DQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADF-LRDNLLINDNVI-HAAHRFG-V 95
Query: 131 KRFIHVSTDEVYGETDM------ESDI--GNPEASQLLPTN-PYSATKAGAEMLVMAYHR 181
K+ + + + +Y D+ ESD+ G PE PTN Y+ K L AY +
Sbjct: 96 KKLVFLGSSCIY--PDLAPQPIDESDLLTGPPE-----PTNEGYAIAKRAGLKLCEAYRK 148
Query: 182 SYGLPTITTRGNNVYGPN-QFPEK-------LIPKFILLAMKGQQ-LPIHGNGSNVRSYL 232
YG I+ N+YGP+ F + LI KF ++G + + + G+G+ R +L
Sbjct: 149 QYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFL 208
Query: 233 YCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN 292
Y D+A A +L + NVG+ E S+ ++A I + + E I + +P
Sbjct: 209 YSDDLARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEVVGFKGE--IVFDTSKPDG 266
Query: 293 DHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
R LD KL+ LGW TP E+G++ T EWY
Sbjct: 267 QPRKLLDVSKLRALGWFPFTPLEQGIRETYEWY 299
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 59/215 (27%), Positives = 86/215 (40%), Gaps = 33/215 (15%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALD----KLDYCSSLKNLHPSRASPNFKFLKG 70
+L+TG G IGS + +++K P +I+ KL + L P +F G
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPK-KIILFSRDEFKLY--EIRQELRQEYNDPKLRFFIG 57
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ + + + G+DT+ H AA HV N E N+ GT + EA G V
Sbjct: 58 DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPMEAIKTNVLGTENVAEAAIENG-V 116
Query: 131 KRFIHVSTDE-VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT-- 187
++F+ +STD+ V PTN ATK AE L A +R G
Sbjct: 117 EKFVLISTDKAVN------------------PTNVMGATKRLAEKLFQAANRESGSGKTR 158
Query: 188 -ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221
R NV G +IP F G + +
Sbjct: 159 FSVVRFGNVLGSRG---SVIPLFKKQIANGGPVTV 190
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 9e-23
Identities = 83/346 (23%), Positives = 138/346 (39%), Gaps = 51/346 (14%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TG +GF G + +L++ Y + + D + + PN +FLKGDIT
Sbjct: 2 VLVTGGSGFFGERLVKQLLERGGTY-VRSFDI----APPGEALSAWQHPNIEFLKGDITD 56
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ + L G D + H AA + +E N+ GT +L+AC+ G V++F+
Sbjct: 57 RNDVEQAL--SGADCVFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCG-VQKFV 110
Query: 135 HVSTDEVYGETDMESDIGNPEASQ---LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ V +I N + + L ++ Y+ TKA AE++V+ + L T R
Sbjct: 111 YTSSSSVIFGGQ---NIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALR 167
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH----- 246
++GP + L+P A KG + G G+N+ + Y ++A A +
Sbjct: 168 PAGIFGPGD--QGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKG 225
Query: 247 RGVIGHVYNVG--------------------TKKERSVLDVAADIC-------TLFKLEP 279
+ + G Y + + + L C F L P
Sbjct: 226 KTISGQTYFITDAEPHNMFELLRPVWKALGFGSRPKIRLSGPLAYCAALLSELVSFMLGP 285
Query: 280 EKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
R YF + K LG+ + EEGL TL WY
Sbjct: 286 YFVFSPFYVRALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLNWY 331
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 36/320 (11%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+I++TG AGF+GSH+ ++LI E++ +D + +NL +P F+ ++ D+
Sbjct: 122 RIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNF-FTGRKENLVHLFGNPRFELIRHDVV 178
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
L+ +D I H A + N + N+ GT +L K G RF
Sbjct: 179 EPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARF 229
Query: 134 IHVSTDEVYGE----TDMESDIGNPEASQLLPTNP------YSATKAGAEMLVMAYHRSY 183
+ ST EVYG+ E+ GN NP Y K AE L M YHR
Sbjct: 230 LLTSTSEVYGDPLEHPQKETYWGN--------VNPIGERSCYDEGKRTAETLAMDYHRGA 281
Query: 184 GLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
G+ R N YGP + +++ F+ ++ Q + ++G+G RS+ Y +D+ +
Sbjct: 282 GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGL 341
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQ 301
++ +G +N+G E ++L++A + ++ TI + + + H+ D
Sbjct: 342 VALMEGEHVGP-FNLGNPGEFTMLELAEVVKET--IDSSATIEFKPNTADDPHKRKPDIS 398
Query: 302 KLKR-LGWKEKTPWEEGLKL 320
K K L W+ K EGL L
Sbjct: 399 KAKELLNWEPKISLREGLPL 418
|
Length = 436 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 4e-22
Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 38/341 (11%)
Query: 2 SGEFEPASYKPK--KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS 59
SG P K K ++++TG AGF+GSH+ +RL+ ++ +D + +N+
Sbjct: 107 SGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDS--VIVVDNF-FTGRKENVMHH 163
Query: 60 RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV 119
++PNF+ ++ D+ L+ +D I H A + N + N+ GT
Sbjct: 164 FSNPNFELIRHDVVEPILLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 216
Query: 120 LLEACKLTGQVKRFIHVSTDEVYGE----TDMESDIGNPEASQLLPTNP------YSATK 169
+L K G RF+ ST EVYG+ +E+ GN NP Y K
Sbjct: 217 MLGLAKRVG--ARFLLTSTSEVYGDPLQHPQVETYWGN--------VNPIGVRSCYDEGK 266
Query: 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSN 227
AE L M YHR + R N YGP + +++ F+ A++ + L ++G+G
Sbjct: 267 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ 326
Query: 228 VRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ 287
RS+ + +D+ E ++ +G +N+G E ++L++A + ++P I +
Sbjct: 327 TRSFQFVSDLVEGLMRLMEGEHVGP-FNLGNPGEFTMLELAKVVQE--TIDPNAKIEFRP 383
Query: 288 DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327
+ + H+ D K K LGW+ K +GL L ++ +++
Sbjct: 384 NTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQ 424
|
Length = 442 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 7e-22
Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 27/214 (12%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKG 70
K +L+TG G IGS + +++K P EI+ + +Y L L +F G
Sbjct: 251 KTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEYKLYLIDMELREKFPELKLRFYIG 309
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ D + + +D + H AA HV N E N+ GT + EA G V
Sbjct: 310 DVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-V 368
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY-GLPTI- 188
K+F+ +STD+ + PTN ATK AE L A +R+ G T
Sbjct: 369 KKFVLISTDKA-----------------VNPTNVMGATKRLAEKLFQAANRNVSGTGTRF 411
Query: 189 -TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221
R NV G +IP F +G L +
Sbjct: 412 CVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV 442
|
Length = 588 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 81/336 (24%), Positives = 125/336 (37%), Gaps = 61/336 (18%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN-FKFLKGDI 72
K+L+TGA GFIG + ++L+ E+ + + A P+ DI
Sbjct: 1 KVLVTGANGFIGRALVDKLLSR--GEEVRIAVR----------NAENAEPSVVLAELPDI 48
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHV--DNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ G+D ++H AA+ HV D ++ N T L A G V
Sbjct: 49 DSFT-----DLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG-V 102
Query: 131 KRFIHVSTDEVYGETDMESDIGNP--EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
KRF+ +S+ +V G E +G P E P + Y +K AE ++ S G+ +
Sbjct: 103 KRFVFLSSVKVNG----EGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVV 158
Query: 189 TTRGNNVYGP----NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD-V 243
R VYGP N + + L +G LP G N RS + ++ +A
Sbjct: 159 ILRPPMVYGPGVRGN------FARLMRLIDRGLPLPP-GAVKNRRSLVSLDNLVDAIYLC 211
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICT------------LFKLE-----PEKTIHYV 286
I + V S ++ +I L K V
Sbjct: 212 ISLPKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKLLGKR--AV 269
Query: 287 QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT 321
R F +Y D +K + LGW+ EEGL+ T
Sbjct: 270 IQRLFGSLQY--DPEKTQNELGWRPPISLEEGLQET 303
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 85/341 (24%), Positives = 138/341 (40%), Gaps = 51/341 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
I++TG AGFIGS++ L + +I+ +D L KNL + + I
Sbjct: 1 MIIVTGGAGFIGSNLVKALNER-GITDILVVDNLSNGEKFKNLVGLK-------IADYID 52
Query: 74 CADLMNYLLVSEG---IDTIMHFAA---QTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
D +++ + I+ I H A T D + +NN T LL C
Sbjct: 53 KDDFKDWVRKGDENFKIEAIFHQGACSDTTETDGKY-----MMDNNYQYTKELLHYCLEK 107
Query: 128 GQVKRFIHVSTDEVYG--ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
RFI+ S+ VYG DI P L P N Y +K + + +
Sbjct: 108 KI--RFIYASSAAVYGNGSLGFAEDIETP---NLRPLNVYGYSKLLFDQWARRHGKEVLS 162
Query: 186 PTITTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPI------HGNGSNVRSYLYCA 235
+ R NVYGP ++ + ++ G+++ + + +G +R ++Y
Sbjct: 163 QVVGLRYFNVYGPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVK 222
Query: 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEKTIHYVQDRPFNDH 294
DV + L + ++NVGT + RS D+A+ FK L E I Y+ F +
Sbjct: 223 DVVKVNLFFLENPSVSGIFNVGTGRARSFNDLAS---ATFKALGKEVKIEYI---DFPED 276
Query: 295 -----RYFL--DDQKLKRLGW-KEKTPWEEGLKLTLEWYKK 327
+ F D KL+ G+ KE EEG+K ++ Y
Sbjct: 277 LRGKYQSFTEADISKLRAAGYTKEFHSLEEGVKDYVKNYLA 317
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-21
Identities = 88/353 (24%), Positives = 140/353 (39%), Gaps = 63/353 (17%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+ G +GF+G H+ +L+ + D + + S S +F GD+T
Sbjct: 3 LVVGGSGFLGRHLVEQLL----RRGNPTVHVFDIRPTFELDPSS--SGRVQFHTGDLTDP 56
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G + + H A+ H S N + N+ GT ++EAC+ G VK+ ++
Sbjct: 57 QDLEKAFNEKGPNVVFHTASPDH--GS--NDDLYYKVNVQGTRNVIEACRKCG-VKKLVY 111
Query: 136 VST-DEVYGETDMESDIGNPEASQ---LLPTNPYSATKAGAEMLVM-AYHRSYGLPTITT 190
S+ V+ DI N + S + Y+ TKA AE LV+ A GL T
Sbjct: 112 TSSASVVFN----GQDIINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTCAL 167
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA------------ 238
R ++GP +L+P + A G+ G+G+N+ + Y +VA
Sbjct: 168 RPAGIFGPGD--RQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADALLS 225
Query: 239 ---------EAFDVILHRGVI-------------GHVYNVGTKKERSVLDVAADI----C 272
EAF I + I G+ K R V A + C
Sbjct: 226 SSHAETVAGEAF-FITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEWTC 284
Query: 273 TLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ EP T V RYF ++ KRLG+ EEG++ TL+W+
Sbjct: 285 KVLGKEPTFTPFRV--ALLCSTRYFNIEKAKKRLGYTPVVTLEEGIERTLQWF 335
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 2e-21
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 30/321 (9%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+LITG AG IGSH+ L++ +++V +D ++L PN ++G I
Sbjct: 1 MKVLITGGAGQIGSHLIEHLLER--GHQVVVIDNFA-TGRREHLPD---HPNLTVVEGSI 54
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
L++ L D ++H AA + D + +E T N+ G +++A K G VKR
Sbjct: 55 ADKALVDKLFGDFKPDAVVHTAA-AYKDPD--DWYEDTLTNVVGGANVVQAAKKAG-VKR 110
Query: 133 FIHVSTDEVYGETDMESDI--GNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
I+ T YG M+ I +P A P + Y+ +K E Y G+ +T
Sbjct: 111 LIYFQTALCYGLKPMQQPIRLDHPRAP---PGSSYAISKTAGE----YYLELSGVDFVTF 163
Query: 191 RGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R NV GP P +P F G++ + R +++ D+A D L G
Sbjct: 164 RLANVTGPRNVIGP---LPTFYQRLKAGKKCFV---TDTRRDFVFVKDLARVVDKALD-G 216
Query: 249 VIGH-VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306
+ GH Y+ + ++ S+ ++ + L + V+ P + LD + +
Sbjct: 217 IRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVVELGPDDVPSILLDPSRTFQDF 276
Query: 307 GWKEKTPWEEGLKLTLEWYKK 327
GWKE TP E + L WY K
Sbjct: 277 GWKEFTPLSETVSAALAWYDK 297
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 3e-20
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TG GF+G H+ L++ E+ D S + L +++GD+T
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRF---SPELLEDFSKLQVITYIEGDVTDK 57
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-----NIYGTHVLLEACKLTGQV 130
+ L +G D ++H AA V FG + + N+ GT +L+AC G V
Sbjct: 58 QDLRRAL--QGSDVVIHTAAIIDV---FG---KAYRDTIMKVNVKGTQNVLDACVKAG-V 108
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVMAYHRSYG--- 184
+ ++ S+ EV G I N + + + PY +KA AE LV+ + S
Sbjct: 109 RVLVYTSSMEVVGPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKNG 168
Query: 185 --LPTITTRGNNVYGP-NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
L T R ++G + F L P + L G G+ + + +Y +VA A
Sbjct: 169 GRLYTCALRPAGIFGEGDPF---LFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWAH 225
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 91.7 bits (227), Expect = 5e-20
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 25/331 (7%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPN---FK 66
PK+ LITG AGFIGS + L+ + + ++ LD Y +L ++ S + F
Sbjct: 15 PKRWLITGVAGFIGSGLLEELL--FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI 72
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + +D ++H AA V S + + NI G +L A +
Sbjct: 73 FIQGDIR--KFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR- 129
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
V F + ++ YG+ D+ E P +PY+ TK E+ + RSY
Sbjct: 130 DAHVSSFTYAASSSTYGD---HPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFN 186
Query: 187 TITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242
I R NV+G Q P +IP++IL +K + + I+G+GS R + Y +V +A
Sbjct: 187 AIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANL 246
Query: 243 VILHRGVIG---HVYNVGTKKERSVLD---VAADICTLFKLEPEKTIHYVQDRPFNDHRY 296
+ + VYNV S+ + + D L++ E + +D D ++
Sbjct: 247 LSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKH 306
Query: 297 FLDD-QKLKR-LGWKEKTPWEEGLKLTLEWY 325
D K+K L ++ + +EGLK TL+WY
Sbjct: 307 SQADITKIKTFLSYEPEFDIKEGLKQTLKWY 337
|
Length = 348 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 9e-20
Identities = 61/266 (22%), Positives = 102/266 (38%), Gaps = 49/266 (18%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALD---KLDYCSSLKNLHPSRASPNFKFLKGD 71
+ +TG GF+G H+ RL++N ++++ L L + + L+GD
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN--GFKVLVLVRSESLGEAHERIEEA-GLEADRVRVLEGD 57
Query: 72 ITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-----NIYGTHVLLE 122
+T +L ++ +D ++H AA F+ N NI GT +LE
Sbjct: 58 LTQPNLGLSAAASRELAGKVDHVIHCAASY--------DFQAPNEDAWRTNIDGTEHVLE 109
Query: 123 ACKLTGQVKRFIHVST-------DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEML 175
+RF +VST + ET++ NPY +KA AE L
Sbjct: 110 LAARLDI-QRFHYVSTAYVAGNREGNIRETELNPGQNFK--------NPYEQSKAEAEQL 160
Query: 176 VMAYHRSYGLPTITTRGNNVYGPNQFPEKLI---PKFILLAMK--GQQLPIHGNGSNVRS 230
V A P R + V G ++ +L + G+ LP+ GN +
Sbjct: 161 VRAAATQI--PLTVYRPSIVVGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLN 218
Query: 231 YLYCAD-VAEAFDVILHRGV-IGHVY 254
L D VA+A + + G ++
Sbjct: 219 -LVPVDYVADAIVYLSKKPEANGQIF 243
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 4e-18
Identities = 91/369 (24%), Positives = 142/369 (38%), Gaps = 89/369 (24%)
Query: 10 YKPKKILITGAAGFIGSHVTNRL------IKNYPDYEIVALDKLDYCSSLKNLHPSRASP 63
++ KK+L+TG GF GS ++ L + Y +L P SP
Sbjct: 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGY------------------SLDPP-TSP 42
Query: 64 N-FKFLK---------GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNN 113
N F+ L GDI A + + + + H AAQ V S+ + E N
Sbjct: 43 NLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETN 102
Query: 114 IYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173
+ GT LLEA + G VK ++V++D+ Y D E G E L +PYS++KA AE
Sbjct: 103 VMGTVNLLEAIRAIGSVKAVVNVTSDKCY-RND-EWVWGYRETDPLGGHDPYSSSKACAE 160
Query: 174 MLVMAYHRSY-------GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNG 225
+++ +Y S+ G+ + R NV G + E +LIP I + + I N
Sbjct: 161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NP 219
Query: 226 SNVR----------SYLYCA--------DVAEAFDVILHRGVIGHVYNVG--TKKERSVL 265
R YL A + A A+ N G V+
Sbjct: 220 DATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAW-------------NFGPRASDNARVV 266
Query: 266 DVAADICTLFKLEPEKTIHYVQDRPFNDHRY-----FLD-DQKLKRLGWKEKTPWEEGLK 319
++ D + + +D +H + LD + LGW + EE +
Sbjct: 267 ELVVD---ALEFWWGDDAEW-EDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVS 322
Query: 320 LTLEWYKKN 328
T++WYK
Sbjct: 323 RTVDWYKAW 331
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 80/346 (23%), Positives = 127/346 (36%), Gaps = 63/346 (18%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVAL--DKLDYCSSLKNLHPSRASPNFKFLKGDI 72
IL+TGA GF+GS++ L+ Y + AL D + ++GD+
Sbjct: 1 ILVTGATGFLGSNLVRALLAQ--GYRVRALVRSGSD--------AVLLDGLPVEVVEGDL 50
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF--EFTNNNIYGTHVLLEACKLTGQV 130
T A + + +G D + H AA T S E N+ GT +L+A G V
Sbjct: 51 TDAASLAAAM--KGCDRVFHLAAFT----SLWAKDRKELYRTNVEGTRNVLDAALEAG-V 103
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPT---NPYSATKAGAEMLVMAYHRSYGLPT 187
+R +H S+ G + E + N Y +K AE+ V+ GL
Sbjct: 104 RRVVHTSSIAALGGPP--DGRID-ETTPWNERPFPNDYYRSKLLAELEVLEAAAE-GLDV 159
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
+ + V+GP +L + G +LP + G S++ DVAE + +
Sbjct: 160 VIVNPSAVFGPGDEGPTSTGLDVLDYLNG-KLPAYPPGG--TSFVDVRDVAEGHIAAMEK 216
Query: 248 GVIGHVYNVGTK--KERSVLDVAADICT-------------------------LFKLEPE 280
G G Y +G + + + + A+I L P
Sbjct: 217 GRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTGKPPL 276
Query: 281 KTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325
T R + + K +R LG+ P EE L+ TL W
Sbjct: 277 LTPR--TARVLRRNYLY-SSDKARRELGY-SPRPLEEALRDTLAWL 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 54/241 (22%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 17 ITGAAGFIGSHVTNRLIKNYPDYEIVAL----------DKLDY-CSSLKNLHPSRASPNF 65
+TGA GF+G + +L+++ P+ +I L ++L +A
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60
Query: 66 KFLKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
+ GD++ +L ++ ++E +D I+H AA + + + N+ GT +L
Sbjct: 61 IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYS---DLRATNVLGTREVL 117
Query: 122 EACKLTGQVKRFIHVST-------DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174
K + F HVST + E + D P LP N Y+ +K AE
Sbjct: 118 RLAKQMKK-LPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLP-NGYTQSKWLAEQ 175
Query: 175 LVMAYHRSYGLPTITTRGNNVYGP------NQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228
LV GLP + R + + G N P+ +L LP +
Sbjct: 176 LVREAAG--GLPVVIYRPSIITGESRTGWINGD--DFGPRGLLGGAGLGVLPDILGDPDA 231
Query: 229 R 229
R
Sbjct: 232 R 232
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 83/328 (25%), Positives = 129/328 (39%), Gaps = 69/328 (21%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITGA G +G+ + L ++E++A D+ L DIT
Sbjct: 2 KILITGANGQLGTELRRAL---PGEFEVIATDR-------AEL--------------DIT 37
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
D + ++ D +++ AA T VD + N G L A G R
Sbjct: 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RL 95
Query: 134 IHVSTDEVY-GETDM---ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+H+STD V+ GE E+D NP N Y +K E V A + +
Sbjct: 96 VHISTDYVFDGEKGGPYKETDTPNP-------LNVYGRSKLAGEEAVRAAGPRH----LI 144
Query: 190 TRGNNVYG--PNQFPEKLIPKFILLAMKGQQLPI----HGNGSNVRSYLYCADVAEAFDV 243
R + VYG N F + + LA +G++L + +G+ + D+A+A
Sbjct: 145 LRTSWVYGEYGNNFVKT----MLRLAKEGKELKVVDDQYGSPTYTE------DLADAILE 194
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--------DRPFNDHR 295
+L + G VY++ E S + A I ++ E I + RP N
Sbjct: 195 LLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGE-VIEPIASAEYPTPAKRPANSS- 252
Query: 296 YFLDDQKLKRLGWKEKTPWEEGLKLTLE 323
LD +KL++ W E LK L+
Sbjct: 253 --LDTKKLEKAFGLSLPEWREALKALLD 278
|
Length = 281 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 3e-17
Identities = 82/344 (23%), Positives = 130/344 (37%), Gaps = 61/344 (17%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG---- 70
I++TG AGFIGS++ L + +I+ +D L R F L
Sbjct: 1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNL------------RDGHKFLNLADLVIA 47
Query: 71 -DITCADLMNYLLVSEG--IDTIMHFAA---QTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
I D ++ L I+ I H A T D + NN + LL+ C
Sbjct: 48 DYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEY-----MMENNYQYSKRLLDWC 102
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIG-NPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+ FI+ S+ YG+ + G E P N Y +K + V
Sbjct: 103 --AEKGIPFIYASSAATYGDGEAGFREGRELER----PLNVYGYSKFLFDQYVRRRVLPE 156
Query: 184 GLPT--ITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQL------PIHGNGSNVRSY 231
L + R NVYGP ++ + + G + +G +R +
Sbjct: 157 ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF 216
Query: 232 LYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF 291
+Y DV + +L GV G ++N+GT + RS D+A L ++ I Y+ P
Sbjct: 217 VYVKDVVDVNLWLLENGVSG-IFNLGTGRARSFNDLAD--AVFKALGKDEKIEYI---PM 270
Query: 292 NDH-----RYFL--DDQKLKRLGW-KEKTPWEEGLKLTLEWYKK 327
+ +YF D KL+ G+ T EEG+K ++W
Sbjct: 271 PEALRGRYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLLA 314
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 89/345 (25%), Positives = 136/345 (39%), Gaps = 41/345 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH----PSRASPNFKFL 68
K LITG G GS++ L++ YE+ + + + +H P P
Sbjct: 3 KVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLH 60
Query: 69 KGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
GD+T D N L + E + D I + AAQ+HV SF + + GT LLEA ++
Sbjct: 61 YGDLT--DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRI 118
Query: 127 TGQVK-RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G+ K RF ST E+YG +I E + P +PY+ K A + + Y SYGL
Sbjct: 119 LGEKKTRFYQASTSELYGLV---QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGL 175
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAM----KGQQLPIH-GNGSNVRSYLYCADVAEA 240
N P + E + + I A+ G Q ++ GN R + + D EA
Sbjct: 176 FACNGILFNHESPLR-GETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA 234
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDV------AADICTLFKLEPEKTIHYVQDRPFN-- 292
++L + Y + T + SV + I ++
Sbjct: 235 MWLMLQQE-EPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIV 293
Query: 293 --DHRYFL---------DDQKLKR-LGWKEKTPWEEGLKLTLEWY 325
D RYF D K K LGW+ + EE ++ +E
Sbjct: 294 EIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEAD 338
|
Length = 345 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 4e-16
Identities = 56/283 (19%), Positives = 106/283 (37%), Gaps = 42/283 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KILI G FIG + L+ +++ + + + + GD
Sbjct: 1 MKILIIGGTRFIGKALVEELLAA--GHDVTVFN--------RGRTKPDLPEGVEHIVGDR 50
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQT--HVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D + LL E D ++ A T V+ L+A K G+V
Sbjct: 51 NDRDALEELLGGEDFDVVVDTIAYTPRQVER------------------ALDAFK--GRV 90
Query: 131 KRFIHVSTDEVYGETDMESD----IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
K++I +S+ VY + + P+A L Y K AE +++ + P
Sbjct: 91 KQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLI---EAAAFP 147
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVIL 245
R +YGP + +L F +G+ + + G+G ++ +++ D+A A
Sbjct: 148 YTIVRPPYIYGPGDYTGRL-AYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAG 206
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD 288
+ IG ++N+ + + ++ E E +H +D
Sbjct: 207 NPKAIGGIFNITGDEAVTWDELLEACAKALGKEAE-IVHVEED 248
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 4e-16
Identities = 94/360 (26%), Positives = 150/360 (41%), Gaps = 69/360 (19%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGD 71
KK+LI G GFIG H++ R+++ D+E+ +D L P F +GD
Sbjct: 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMD-----MQTDRLGDLVNHPRMHFFEGD 54
Query: 72 ITCADLMNYLLVSEGI---DTIMHFAA----QTHVDNSFGNSFE--FTNNNIYGTHVLLE 122
IT +N + + D I+ A T+V FE F N ++
Sbjct: 55 IT----INKEWIEYHVKKCDVILPLVAIATPATYVKQPL-RVFELDFEAN----LPIVRS 105
Query: 123 ACKLTGQVKRFIHVSTDEVYG-ETDMESDIGNPEASQLL--PTNP----YSATKAGAEML 175
A K K + ST EVYG D E D PEAS L+ P N Y+ +K + +
Sbjct: 106 AVKYG---KHLVFPSTSEVYGMCPDEEFD---PEASPLVYGPINKPRWIYACSKQLMDRV 159
Query: 176 VMAYHRSYGLPT--------ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227
+ AY GL I +++Y P + +++ +F+ ++G+ + + GS
Sbjct: 160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ 219
Query: 228 VRSYLYCADVAEAFDVILHR--GV-IGHVYNVGT-KKERSVLDVAADICTLFKLEPE--- 280
R++ D +A I+ GV G +YN+G K SV ++A + L PE
Sbjct: 220 KRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAE 279
Query: 281 -----KTI------HY---VQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYK 326
K + +Y QD +R D ++ LGW KT ++ L+ E Y+
Sbjct: 280 SAKKVKLVETTSGAYYGKGYQDV---QNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYR 336
|
Length = 347 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 8e-16
Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+LITGA+GF+G + RL+ + P+ ++ +D + PS A + GD+
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVPNERLILIDV------VSPKAPSGAPR-VTQIAGDLA 54
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTGQVKR 132
L+ L + D + H AA V F+ N+ GT LLEA + G R
Sbjct: 55 VPALIE-ALANGRPDVVFHLAA--IVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPR 111
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR-------SYGL 185
F+ S+ VYG + + + L P + Y A KA E+L+ Y R + L
Sbjct: 112 FVFTSSLAVYG---LPLPNPVTDHTALDPASSYGAQKAMCELLLNDYSRRGFVDGRTLRL 168
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ--LPIHGNGSNVRSYLYCADVAEAFDV 243
PT+ R PN+ I + G++ LP +R +L VA A
Sbjct: 169 PTVCVRPGR---PNKAASAFASTIIREPLVGEEAGLP---VAEQLRYWL--KSVATAVAN 220
Query: 244 ILH 246
+H
Sbjct: 221 FVH 223
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 59/260 (22%), Positives = 93/260 (35%), Gaps = 38/260 (14%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT- 73
IL+TGAAG +G + RL + + LD+ P + P ++++ DI
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRR---------PPGSPPKVEYVRLDIRD 51
Query: 74 -CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A + D ++H A N+ GT +L+AC G V R
Sbjct: 52 PAAAD---VFREREADAVVHLAFILDPPRDGAERHRI---NVDGTQNVLDACAAAG-VPR 104
Query: 133 FIHVSTDEVYG-ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY-GLPTITT 190
+ S+ VYG D + + + P YS KA E L+ + R + L
Sbjct: 105 VVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVL 164
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250
R + GP + ++LP+ G +L+ DVA A L V
Sbjct: 165 RPATILGPG------TRNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARA----LVLAV- 213
Query: 251 GHVYNVGTKKERSVLDVAAD 270
+ +VA D
Sbjct: 214 -------RAGATGIFNVAGD 226
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 1e-15
Identities = 87/342 (25%), Positives = 143/342 (41%), Gaps = 38/342 (11%)
Query: 3 GEFEPASYKP---KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS 59
E E Y P +I ITGA GFI SH+ RL + I+A KN H S
Sbjct: 9 AELEREPYWPSEKLRICITGAGGFIASHIARRL--KAEGHYIIA------SDWKKNEHMS 60
Query: 60 RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTN------NN 113
+F D+ + N L V++G+D + + AA G F +N NN
Sbjct: 61 EDMFCHEFHLVDLRVME--NCLKVTKGVDHVFNLAADMG-----GMGFIQSNHSVIMYNN 113
Query: 114 IYGTHVLLEACKLTGQVKRFIHVSTDEVYGE-TDMESDIGNPEASQ--LLPTNPYSATKA 170
+ +LEA ++ G VKRF + S+ +Y E +E+++ E+ P + Y K
Sbjct: 114 TMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 172
Query: 171 GAEMLVMAYHRSYGLPTITTRGNNVYGP----NQFPEKLIPKFILLAMKG-QQLPIHGNG 225
E L Y + +G+ R +N+YGP EK F A+ + + G+G
Sbjct: 173 ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDG 232
Query: 226 SNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT-IH 284
RS+ + + E + L + N+G+ + S+ ++A E +K I
Sbjct: 233 KQTRSFTFIDECVEGV-LRLTKSDFREPVNIGSDEMVSMNEMAE---IALSFENKKLPIK 288
Query: 285 YVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYK 326
++ R + ++LGW ++GL++T W K
Sbjct: 289 HIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIK 330
|
Length = 370 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 4e-15
Identities = 40/231 (17%), Positives = 63/231 (27%), Gaps = 67/231 (29%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TG +G IG + L +++ + + D
Sbjct: 1 VLVTGGSGGIGGAIARWLASR-GSPKVLVVSRRDV------------------------- 34
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACKLTGQV 130
++H AA N+ GT LLEA + +
Sbjct: 35 ---------------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKA 79
Query: 131 K---RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---G 184
K RFI +S+ G P Y+A+KA + L + G
Sbjct: 80 KRLGRFILISSVAGL--------FGAP------GLGGYAASKAALDGLAQQWASEGWGNG 125
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235
LP G + P+ IL + V L A
Sbjct: 126 LPATAVACGTWAGSGMAKGPVAPEEILG--NRRHGVRTMPPEEVARALLNA 174
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-15
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
ILI GA GFIG + L++ +E+ L + ++GD+
Sbjct: 1 ILILGATGFIGRALARELLEQ--GHEVTLLVRNTKRL------SKEDQEPVAVVEGDLRD 52
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
D ++ + +G+D ++H A F ++ GT +LEA K G VK FI
Sbjct: 53 LDSLSDAV--QGVDVVIHLAGAPRDTRDFCEV------DVEGTRNVLEAAKEAG-VKHFI 103
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
+S+ YG+ E ++ P++PY A KA E ++ R LP R
Sbjct: 104 FISSLGAYGDL--------HEETEPSPSSPYLAVKAKTEAVL----REASLPYTIVRPGV 151
Query: 195 VYG 197
+YG
Sbjct: 152 IYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVA-LDKLDYCSSLKNLHPSR-ASPNFKFLKGD 71
+L+TGA GFI SH+ +L+K Y++ + L + LK L + + +F+ D
Sbjct: 1 LVLVTGATGFIASHIVEQLLKA--GYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVD 58
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
A + +G+D ++H A+ + + + GT +LEA K G VK
Sbjct: 59 DLTAP-NAWDEALKGVDYVIHVASPFPFTG-PDAEDDVIDPAVEGTLNVLEAAKAAGSVK 116
Query: 132 RFIHVS--------TDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173
R + S T E G+ E D + S+ + Y A+K AE
Sbjct: 117 RVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAE 166
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 1e-13
Identities = 59/226 (26%), Positives = 89/226 (39%), Gaps = 31/226 (13%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVAL--------------DKLDYCSSLKNLHPS 59
+L+TGA GF+G+++ L+K +I L D L NL
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGL--NLWDE 58
Query: 60 RASPNFKFLKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY 115
K + GD++ +L +Y ++E +D I+H A N E N+
Sbjct: 59 LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANV---NWVYPYEELKPANVL 115
Query: 116 GTHVLLEACKLTGQVKRFIHVST-----DEVYGETDMESDIGNPEASQLLPTNPYSATKA 170
GT LL+ TG++K VST E Y D E + SQ N Y +K
Sbjct: 116 GTKELLKLA-ATGKLKPLHFVSTLSVFSAEEYNALDDEESD-DMLESQNGLPNGYIQSKW 173
Query: 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG 216
AE L+ + GLP R N++G ++ F +KG
Sbjct: 174 VAEKLLREA-ANRGLPVAIIRPGNIFGDSETGIGNTDDFFWRLLKG 218
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 3e-13
Identities = 60/294 (20%), Positives = 97/294 (32%), Gaps = 42/294 (14%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFKFLKG 70
+L+TGA+GF+ SHV +L++ Y++ A K+ + L +L +
Sbjct: 1 VLVTGASGFVASHVVEQLLER--GYKVRATVRDPSKVKKVNHLLDL--DAKPGRLELAVA 56
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+T D ++ V +G + H A + N E I GT L+A V
Sbjct: 57 DLT--DEQSFDEVIKGCAGVFHVATPVSFSSKDPN--EVIKPAIGGTLNALKAAAAAKSV 112
Query: 131 KRFIHVST-----------DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
KRF+ S+ + + + + + Y+A+K AE +
Sbjct: 113 KRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPK-KSAWVYAASKTLAEKAAWKF 171
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN--------GSNVRSY 231
+ IT G E P AM I GN Y
Sbjct: 172 ADENNIDLITVIPTLTIGTIFDSE--TPSSSGWAMS----LITGNEGVSPALALIPPGYY 225
Query: 232 LYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHY 285
++ D+ A L + Y + T + TL K P T
Sbjct: 226 VHVVDICLAHIGCLELPIARGRY-ICTAGNFDWNTLLK---TLRKKYPSYTFPT 275
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 7e-13
Identities = 69/325 (21%), Positives = 120/325 (36%), Gaps = 73/325 (22%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPD--------------------YEIVALDKLDYCSS 52
K +LITGA GF+G + +L+++ PD E++ D +
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 53 LKNLHPSRASPNFKFLKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
L L S+ P ++GD++ +L + + E ++ I+H AA +F +
Sbjct: 61 LNPLFESKIVP----IEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATV----TFDERLD 112
Query: 109 FT-NNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGE-TDMESDI--------GNPEASQ 158
+ N+ GT LLE K ++K F+HVST V G+ +E + + +
Sbjct: 113 EALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILE 172
Query: 159 LLPT---------------NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP- 202
L+ N Y+ TKA AE LV+ LP + R + V + P
Sbjct: 173 LMDDLELERATPKLLGGHPNTYTFTKALAERLVLKE--RGNLPLVIVRPSIVGATLKEPF 230
Query: 203 ------EKLIPKFILLAMKGQQLPIHGNGSNVRSYL---YCAD--VAEAFDVILHRGVIG 251
L KG ++ + + V + A+ +A A + +
Sbjct: 231 PGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPREL 290
Query: 252 HVYNVGTKKERSVLDVAADICTLFK 276
VY+ G+ + L
Sbjct: 291 EVYHCGSSDVNPF--TWGEAEELIN 313
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 32/181 (17%)
Query: 375 LIYGKTGWIGGLLGKYCKDKGI-----------------AFEFGTGRLEDKNSLLDDMKR 417
L+ G TG+IG L + +G F G L D ++L +
Sbjct: 2 LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLAE 61
Query: 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIY 476
V+P V++ A +G V + IR NV+GTL L + + V + ++ +Y
Sbjct: 62 VQPDAVIHLAAQSG---VGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVY 118
Query: 477 EYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINFQVE 534
+ ED S Y+ K L +Y + L I L F V
Sbjct: 119 ------GDVADPPITEDTPLGP-LSPYAAAKLAAERLVEAYARAYGLRAVI--LRLFNVY 169
Query: 535 G 535
G
Sbjct: 170 G 170
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 37/262 (14%)
Query: 90 IMHFAAQTHVDNSFGNS---FEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVY---- 142
++ AA+ V N +F N+ +++A G VK+ + + + +Y
Sbjct: 53 VILAAAK--VGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFA 109
Query: 143 ----GETDMESDIGNPEASQLLPTNP-YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYG 197
ET + + G PE PTN Y+ K + AY YG I+ N+YG
Sbjct: 110 PQPIPETALLT--GPPE-----PTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYG 162
Query: 198 PN-QF-PEK------LIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHRG 248
P+ F PE LI +F G + G+GS +R +L+ D+A+A V L R
Sbjct: 163 PHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAV-VFLMRR 221
Query: 249 VIG--HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
G HV NVG+ E ++ ++A + + E E + + +P R +D KL+ L
Sbjct: 222 YSGAEHV-NVGSGDEVTIKELAELVKEVVGFEGE--LVWDTSKPDGTPRKLMDSSKLRSL 278
Query: 307 GWKEKTPWEEGLKLTLEWYKKN 328
GW K ++GL+ T +WY +N
Sbjct: 279 GWDPKFSLKDGLQETYKWYLEN 300
|
Length = 306 |
| >gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-12
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K ILITG G G +RL++NY +I+ + + + +P +F GD+
Sbjct: 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE--MQQKFPAPCLRFFIGDV 62
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + L G+D ++H AA V + N FE NI G +++A + VKR
Sbjct: 63 RDKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAA-IDNGVKR 119
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA---YHRSYGLPTIT 189
+ +STD +A+ P N Y ATK ++ L +A S G
Sbjct: 120 VVALSTD---------------KAAN--PINLYGATKLASDKLFVAANNISGSKGTRFSV 162
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKG-QQLPI 221
R NV G ++P F L +G +LPI
Sbjct: 163 VRYGNVVGSRG---SVVPFFKSLKEEGVTELPI 192
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324 |
| >gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 3e-12
Identities = 89/349 (25%), Positives = 142/349 (40%), Gaps = 50/349 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY---CSSLKNLHPSRASPN---FK 66
K LITG G GS++ L++ YE+ L + +++++ + N K
Sbjct: 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMK 58
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNI-YGTHVLLEACK 125
GD+T + + ++ I + AAQ+HV SF E+T + GT LLEA +
Sbjct: 59 LHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSF-EIPEYTADVDGIGTLRLLEAVR 117
Query: 126 LTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
G +K +F ST E+YG+ +I E + P +PY+A K A + + Y +Y
Sbjct: 118 TLGLIKSVKFYQASTSELYGKV---QEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY 174
Query: 184 GLPTIT---------TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLY 233
GL + RG N F + I + G Q ++ GN R + +
Sbjct: 175 GLFAVNGILFNHESPRRGEN------FVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGH 228
Query: 234 CADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV 286
D EA ++L + VI G ++V E S + + K E
Sbjct: 229 AKDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKE 288
Query: 287 QDRPFN--DHRYFL---------DDQKLKR-LGWKEKTPWEEGLKLTLE 323
+ D RYF D K K LGWK + +E+ +K +E
Sbjct: 289 TGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVE 337
|
Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 1e-11
Identities = 47/265 (17%), Positives = 84/265 (31%), Gaps = 57/265 (21%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KIL+TGA GF+G V L+ +E+ A R L G +
Sbjct: 1 MKILVTGATGFVGGAVVRELLARG--HEVRAA--------------VRNPEAAAALAGGV 44
Query: 73 TCADLMN-----YLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ ++G+D + + + + + T A
Sbjct: 45 EVVLGDLRDPKSLVAGAKGVDGV-LLISGLLDGSDAFRAVQVTAV----VRAAEAAGAG- 98
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
VK + +S + +D +P + KA E + + S G+P
Sbjct: 99 --VKHGVSLS--------VLGADAASPS--------ALARAKAAVEAALRS---S-GIPY 136
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILH 246
T R Y + A + LP+ G S + DVAEA +
Sbjct: 137 TTLRRAAFYLGAG-------AAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDA 189
Query: 247 RGVIGHVYNVGTKKERSVLDVAADI 271
G Y + + ++ ++A+ +
Sbjct: 190 PATAGRTYELAGPEALTLAELASGL 214
|
Length = 275 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 1e-11
Identities = 80/327 (24%), Positives = 114/327 (34%), Gaps = 64/327 (19%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TGA G +G +T L + E+VALD+ + D+T
Sbjct: 1 ILVTGANGQLGRELTRLLAER--GVEVVALDRPE---------------------LDLTD 37
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ + L+ D +++ AA T VD + N G L EAC G I
Sbjct: 38 PEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLI 95
Query: 135 HVSTDEVY-GETDM---ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
H+STD V+ G E D P N Y TK E V + +
Sbjct: 96 HISTDYVFDGAKGGPYREDDPTGPL-------NVYGRTKLAGEQAV----LAANPRHLIL 144
Query: 191 RGNNVYGP--NQFPEKLIPKFIL-LAMKGQQLPI----HGNGSNVRSYLYCADVAEAFDV 243
R VYG N F K +L LA + +L + G+ ++ R +
Sbjct: 145 RTAWVYGEYGNNF-----VKTMLRLAAERDELRVVDDQLGSPTSAR--DLADALLALIRK 197
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLF-----KLEPEKTIHYVQ--DRPFNDHRY 296
L + Y++ E S D A I ++ P T Y RP N
Sbjct: 198 RLRGPALAGTYHLAGSGETSWYDFARAIFDEAGADGGRVRPIPTAEYPTPARRPANSV-- 255
Query: 297 FLDDQKLKRLGWKEKTPWEEGLKLTLE 323
LD KL+ W E L L+
Sbjct: 256 -LDTSKLEATFGIPLPDWREALAEVLD 281
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 31/208 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIV----------ALDKLDY-CSSLKNLHPSRAS 62
+L+TGA GF+G+++ L++ +++ A+++L S + H A
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60
Query: 63 PNFKFLKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
+ + GD++ L + ++E +DTI+H A + + E N+ GT
Sbjct: 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYS---ELRGANVLGTR 117
Query: 119 VLLEACKLTGQVKRFIHVST----DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174
+L +G+ K +VST + T E D Y+ +K AE+
Sbjct: 118 EVLRLA-ASGRAKPLHYVSTISVGAAIDLSTVTEDD--ATVTPPPGLAGGYAQSKWVAEL 174
Query: 175 LVMAYHRSYGLPTITTR-----GNNVYG 197
LV GLP R GN+ G
Sbjct: 175 LV-REASDRGLPVTIVRPGRILGNSYTG 201
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 4e-11
Identities = 73/330 (22%), Positives = 119/330 (36%), Gaps = 73/330 (22%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ILITGA G +G + +L +VAL + S L D+T
Sbjct: 1 RILITGANGQLGRELVQQLSP--EGRVVVALTR----SQL-----------------DLT 37
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + LL + D +++ AA T VD + + + N L A G R
Sbjct: 38 DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARL 95
Query: 134 IHVSTDEV--------YGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHRS 182
+H+STD V Y E D TNP Y +K E V R+
Sbjct: 96 VHISTDYVFDGEGKRPYREDD--------------ATNPLNVYGQSKLAGEQAV----RA 137
Query: 183 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF- 241
G + R + +YG + + LA +G++L + + + S Y D+A
Sbjct: 138 AGPNALIVRTSWLYGGGG-GRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIA 194
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFK--LEPEKTIHYVQDRPFNDHRY--- 296
++ VY++ + S + A I F+ +H + +P + Y
Sbjct: 195 ALLQRLARARGVYHLANSGQCSWYEFAQAI---FEEAGADGLLLHPQEVKPISSKEYPRP 251
Query: 297 -------FLDDQKLKRLGWKEKTPWEEGLK 319
LD+ KL + W E L+
Sbjct: 252 ARRPAYSVLDNTKLVKTLGTPLPHWREALR 281
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 8e-11
Identities = 88/339 (25%), Positives = 131/339 (38%), Gaps = 78/339 (23%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
L+TG GF+G H+ L++ + EI LDK +++ S+ ++GDI
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIK- 61
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFG--NSFEFTNNNIYGTHVLLEACKLTGQVKR 132
DL +G+ ++H AA V FG N E N+ GT +LEAC VKR
Sbjct: 62 -DLSFLFRACQGVSVVIHTAAIVDV---FGPPNYEELEEVNVNGTQAVLEACVQNN-VKR 116
Query: 133 FIHVSTDEV-----YGETDMESDIGNP-EASQLLPTNPYSATKAGAEMLVMA-----YHR 181
++ S+ EV G P E + T PY+++K AE +V+ +
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTS---TPPYASSKLLAENIVLNANGAPLKQ 173
Query: 182 SYGLPTITTRGNNVYGPN-QFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
L T R +YG F ++ +L
Sbjct: 174 GGYLVTCALRPMYIYGEGSHFLTEIFDF----------------LLTNNGWL-------- 209
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVA-ADICTLFKLE-PEKTI----HYVQD-RPFND 293
F I GV VY VG +VA A I L+ P+K I +++ D P N
Sbjct: 210 FPRIKGSGVNPLVY-VG--------NVAWAHILAAKALQVPDKAIRGQFYFISDDTPHNS 260
Query: 294 HRYFLDDQKL-KRLGWKEKTPWEEGLKLTLEWYKKNPHW 331
+ F + +L K LG + KT W WY P +
Sbjct: 261 YSDF--NYELLKELGLRLKTSW---------WYV--PLF 286
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 59/255 (23%), Positives = 91/255 (35%), Gaps = 53/255 (20%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ + GA GFIG +V NRL K +++ + + + + L F++ D+
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKR--GSQVIVPYRCEAYA--RRLLVMGDLGQVLFVEFDL 56
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHV-----LLEAC 124
E I A D N G +E N + HV L +A
Sbjct: 57 R---------DDESIR-----KALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAA 102
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
K G V+R IH+S + +D +P + Y +KA E V
Sbjct: 103 KEAG-VERLIHISA--------LGADANSP--------SKYLRSKAEGEEAVREAF---- 141
Query: 185 LPTITT-RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
P T R + V+G ++ + +F L P+ G G +Y DVAEA
Sbjct: 142 -PEATIVRPSVVFGRE---DRFLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIAR 197
Query: 244 ILHRGVI-GHVYNVG 257
L G Y +
Sbjct: 198 ALKDPETEGKTYELV 212
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-------HPSRASP 63
K LITG G GS++T L+ YE+ + + + + L HP++A
Sbjct: 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKA-- 60
Query: 64 NFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEA 123
K GD++ A + L D + + AAQ+HV SF + G LLEA
Sbjct: 61 RMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEA 120
Query: 124 CKLTGQVK----RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
+L GQ ++ + E+YG T E + P +PY+ K A + Y
Sbjct: 121 VRLHGQETGRQIKYYQAGSSEMYGSTPPPQS----ETTPFHPRSPYAVAKVAAHWYTVNY 176
Query: 180 HRSYGL 185
+YGL
Sbjct: 177 REAYGL 182
|
Length = 340 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 4e-10
Identities = 57/340 (16%), Positives = 105/340 (30%), Gaps = 76/340 (22%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKG-----------------IAFEFGTGRLEDKNSLLDDM 415
+ L+ G G+IG L + G EF L D++ + +
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELA 61
Query: 416 KRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATG 473
K V V++ A + P D S E + NV GTL L + + V + +
Sbjct: 62 KGVP-DAVIHLAAQSSVP--DSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVS 118
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQV 533
+Y P ED P + Y +K
Sbjct: 119 VVYGDPPPLP------IDEDLGPPRPLNPYGVSKLA-----------------------A 149
Query: 534 EGLLKAYE-----NVCTLRL------RMPISSDLSNPRNFVTKLARYNKVVNIPNS---- 578
E LL+AY V LR F+ +L + ++ I
Sbjct: 150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQT 209
Query: 579 --MTVLDEMLPIAIEMARRNCRGAWNFTNPGV-ISHNEILELYKEYIDPQLKWSNFNLEE 635
+D++ + G +N + I+ E+ E E + + +
Sbjct: 210 RDFVYVDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLG 269
Query: 636 QAKVLVAPRSNNHMDVTKLKKE---FPEVLSIKDSIIKYV 672
+ L + +D++K + P+V S+++ + +
Sbjct: 270 RRGDLREGK---LLDISKARAALGWEPKV-SLEEGLADTL 305
|
Length = 314 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 47/224 (20%), Positives = 82/224 (36%), Gaps = 26/224 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFKF- 67
+ +L+TGA GF+G+++ L+ + D +++ L + L+ +
Sbjct: 1 RNVLLTGATGFLGAYLLLELL-DRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSA 59
Query: 68 -----LKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
+ GD+ DL + ++E +D I+H AA + E N+ GT
Sbjct: 60 DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTA 116
Query: 119 VLLEACKLTGQVKRFIHVSTDEVY------GETDMESDIGNPEASQLLPTNPYSATKAGA 172
+L TG+ K +VS+ V T +I Y +K A
Sbjct: 117 EVLRLA-ATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVA 175
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG 216
E LV GLP R + G ++ F+ + G
Sbjct: 176 EKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLG 218
|
Length = 382 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 5e-09
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 375 LIYGKTGWIGGLLGKYCKDKGIAFEFGTGR----LEDKNSLLDDMKRVRPTHVLNAAGIT 430
L+ G G +G L + ++G+ R L D ++ ++ RP V+NAA T
Sbjct: 2 LVTGANGQLGRELTRLLAERGVEV-VALDRPELDLTDPEAVAALVREARPDVVVNAAAYT 60
Query: 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIG- 489
VD ES N +G LA+ C + L++ +T Y +D G+ G
Sbjct: 61 ---AVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTD--YVFD-----GAKGGP 110
Query: 490 FKEDDEPNFTRSFYSKTK 507
++EDD + Y +TK
Sbjct: 111 YREDDPTG-PLNVYGRTK 127
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 71/313 (22%), Positives = 114/313 (36%), Gaps = 42/313 (13%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+ +TGA GFIGS V L+ +E+V L + D + L + A +GD+
Sbjct: 2 KVFVTGATGFIGSAVVRELVAA--GHEVVGLARSD--AGAAKLEAAGAQV----HRGDLE 53
Query: 74 CADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
D +L D ++H A + F N + + L EA + TG K
Sbjct: 54 DLD----ILRKAAAEADAVIHLAF----THDFDNFAQACEVDRRAIEALGEALRGTG--K 103
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
I+ S G + G E + P A +A +E + ++
Sbjct: 104 PLIYTS-----GIWLLGPTGGQEEDEEAPDDPPTPAARAVSEAAALELAERGVRASVVRL 158
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
V+G +P I +A + G+G N ++ D A + + L +G G
Sbjct: 159 PPVVHGRGD--HGFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAG 216
Query: 252 HVYNVGTKKERSVLDVAADICTLFKLE------PEKTIHYVQDRPFNDHRYFLDDQ---- 301
VY+ ++ V D+A I + E H+ F LD
Sbjct: 217 SVYHAVAEEGIPVKDIAEAIGRRLGVPVVSIPAEEAAAHFGWLAMF----VALDQPVSSQ 272
Query: 302 -KLKRLGWKEKTP 313
+RLGWK + P
Sbjct: 273 KTRRRLGWKPQQP 285
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 6e-08
Identities = 85/356 (23%), Positives = 141/356 (39%), Gaps = 67/356 (18%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+L+TGA GF+GS V L++ E+ L + S +NL + + ++GD+
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPT--SDRRNL----EGLDVEIVEGDL 52
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHV---DNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
+ + G + H AA + D E N+ GT LL A G
Sbjct: 53 RDPASLRKAV--AGCRALFHVAADYRLWAPDPE-----EMYAANVEGTRNLLRAALEAG- 104
Query: 130 VKRFIHVSTDEVYGETDMESDIGNP--EASQLLPTN---PYSATKAGAEMLVMAYHRSYG 184
V+R ++ S+ G + D G P E + + Y +K AE + G
Sbjct: 105 VERVVYTSSVATLG---VRGD-GTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG 160
Query: 185 LPTITTRGNNVYGPNQFPEKLIP--KFILLAMKGQQLPIHGN-GSNVRSYLYCADVAEAF 241
LP + + GP K P + I+ + G ++P + + G N+ ++ DVAE
Sbjct: 161 LPVVIVNPSTPIGP--RDIKPTPTGRIIVDFLNG-KMPAYVDTGLNL---VHVDDVAEGH 214
Query: 242 DVILHRGVIGHVYNVG-----------------------TKKERSVLDVAA----DICTL 274
+ L RG IG Y +G K R +L A + L
Sbjct: 215 LLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARL 274
Query: 275 FKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
EP T+ V R +F + ++ LG+++ P E L+ +EW++ N +
Sbjct: 275 TGKEPRVTVDGV--RMAKKKMFFSSAKAVRELGYRQ-RPAREALRDAVEWFRANGY 327
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 66/304 (21%), Positives = 107/304 (35%), Gaps = 59/304 (19%)
Query: 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL--EDKNSLLDDMKRVRPTHVLNAAGI 429
+K LI G G +G L + + L D +++L+ ++ RP V+NAA
Sbjct: 1 MKILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAY 60
Query: 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGS-SI 488
T VD ES N G LA E L++ +T +++ G
Sbjct: 61 T---AVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFD-------GEKGG 110
Query: 489 GFKEDDEPNFTRSFYSKTKAMVTFLSYL-EIFVLVICIECLINFQVEGLLKAYENVCTLR 547
+KE D PN + Y ++K E V LI
Sbjct: 111 PYKETDTPN-PLNVYGRSK-------LAGEEAVRAAGPRHLI------------------ 144
Query: 548 LRMPISSDLSNPRNFVT---KLARYNKVVNIPN----SMTVLDEMLPIAIEMARRNCRGA 600
LR NFV +LA+ K + + + S T +++ +E+ + G
Sbjct: 145 LRTSWVYG-EYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGG 203
Query: 601 -WNFTNPGVIS----HNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPR-SNNHMDVTKL 654
++ N G S I E +D ++ A R +N+ +D KL
Sbjct: 204 VYHLVNSGECSWYEFAKAIFEEAG--VDGEVIEPI---ASAEYPTPAKRPANSSLDTKKL 258
Query: 655 KKEF 658
+K F
Sbjct: 259 EKAF 262
|
Length = 281 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 33/217 (15%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIK-NYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
+K K +LITG G G+ V R + + + I + D+ ++ + KF
Sbjct: 2 FKDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDE----KKQDDMRKKYNNSKLKFY 57
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
GD+ D + L + G+D I H AA V + + E N+ GT +LEA +
Sbjct: 58 IGDVR--DYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAA-IAN 114
Query: 129 QVKRFIHVSTDE-VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
VKR + +STD+ VY P N +KA E +++A R+
Sbjct: 115 GVKRVVCLSTDKAVY------------------PINAMGISKAMMEKVMVAKSRNVDSSK 156
Query: 188 IT---TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221
TR NV +IP F+ L G+ L I
Sbjct: 157 TVICGTRYGNVMASRG---SVIPLFVDLIKAGKPLTI 190
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 99/387 (25%), Positives = 154/387 (39%), Gaps = 99/387 (25%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP------- 63
KP I + GA GFIGSH+ +L+ P ++++ALD Y +K+L P
Sbjct: 13 KPLTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVPWSGRIQF 69
Query: 64 ---NFKF---LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGT 117
N K L+G I ADL TI A T D N+ + IY
Sbjct: 70 HRINIKHDSRLEGLIKMADL-----------TINLAAICTPADY---NTRPL--DTIYSN 113
Query: 118 HV----LLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN--PEASQLLPTNP------- 164
+ +++ C KR IH ST EVYG+T IG+ P+ L +P
Sbjct: 114 FIDALPVVKYCSENN--KRLIHFSTCEVYGKT-----IGSFLPKDHP-LRQDPAFYVLKE 165
Query: 165 ----------------YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPN-QF------ 201
Y+ K E L+ A GL R N GP F
Sbjct: 166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDG 225
Query: 202 PEKLIPKFILLA------MKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--VIGHV 253
P + +P+ +LA ++ + L + G + R+++Y D EA +++ GH+
Sbjct: 226 PSEGVPR--VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHI 283
Query: 254 YNVGT-KKERSVLDVAADICTLF-----KLEPEKTIHYVQDRPFNDHRYFLDDQKL---- 303
+NVG E +V +A + ++ + E+ V + F Y D+++
Sbjct: 284 FNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMT 343
Query: 304 ---KRLGWKEKTPWEEGLKLTLEWYKK 327
K+LGW KT + L+ TL + K
Sbjct: 344 IINKQLGWNPKTSLWDLLESTLTYQHK 370
|
Length = 386 |
| >gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 7e-07
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLKGD 71
++LI G GFIG+H+T RL++ +YE+ LD D S P F F++GD
Sbjct: 316 TRVLILGVNGFIGNHLTERLLR-DDNYEVYGLDIGSDAISRF------LGHPRFHFVEGD 368
Query: 72 IT 73
I+
Sbjct: 369 IS 370
|
Length = 660 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 8e-07
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 23/235 (9%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+LITG G+ G + L K+ V + D + L KF++ D+
Sbjct: 1 SVLITGGGGYFGFRLGCALAKSG-----VHVILFDIRRPQQEL-----PEGIKFIQADVR 50
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
DL G+D + H A+ N N+ GT +++ C +V R
Sbjct: 51 --DLSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVPRL 107
Query: 134 IHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLV-----MAYHRSYG-L 185
I+ ST V G+ D P L + YS TK+ AE LV M + G L
Sbjct: 108 IYTSTFNVIFGGQPIRNGDESLPYLPLDLHVDHYSRTKSIAEQLVLKANNMPLPNNGGVL 167
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
T R +YGP + ++ +P+ + KG + ++G+ ++ +++ ++ +A
Sbjct: 168 RTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFMFVYGDPKSLVEFVHVDNLVQA 220
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 8e-07
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ILITG G IGS + L K Y ++A D H + P F D+
Sbjct: 1 RILITGGLGQIGSELAKLLRKRYGKDNVIASDIRK-----PPAHVVLSGP---FEYLDVL 52
Query: 74 CADLMNYLLVSEGIDTIMHFAA------QTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ ++V+ I I+H AA + + ++ + N+ G H +LE +
Sbjct: 53 DFKSLEEIVVNHKITWIIHLAALLSAVGEKNPPLAW-------DVNMNGLHNVLELAR-- 103
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
R ST +G T + P+ + P Y +K AE+L YH +G+
Sbjct: 104 EHNLRIFVPSTIGAFGPTTPRN--NTPDDTIQRPRTIYGVSKVAAELLGEYYHHKFGV 159
|
This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 61/297 (20%), Positives = 97/297 (32%), Gaps = 50/297 (16%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+LI G G++G + +L+ +++ S + L R +
Sbjct: 1 VLILGC-GYLGQRLARQLLAQ--GWQVTGT-----TRSPEKLAADRPAGVTPLA------ 46
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV--LLEACKLTGQVKR 132
ADL A H+ S + Y + LL+A V+R
Sbjct: 47 ADL----------TQPGLLADVDHLVISLPPP-AGSYRGGYDPGLRALLDALAQLPAVQR 95
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
I++S+ VYG+ E E S P+ AE ++A PT R
Sbjct: 96 VIYLSSTGVYGDQQGEWV---DETSPPNPSTESGRALLEAEQALLALGS---KPTTILRL 149
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
+YGP + + + +G P GN R ++ D+ A L R G
Sbjct: 150 AGIYGPG----RHPLRRLA---QGTGRPPAGNAPTNR--IHVDDLVGALAFALQRPAPGP 200
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY--FLDDQKLKRLG 307
VYNV + + L L P PF R + + +LK
Sbjct: 201 VYNVVDDLPVTRGEFYQAAAELLGLPP------PPFIPFAFLREGKRVSNDRLKAEL 251
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 63/350 (18%), Positives = 109/350 (31%), Gaps = 89/350 (25%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ GA+G IG V L + D +V+ ++ P + + D
Sbjct: 1 TAHVLGASGPIGREVARELRRRGWDVRLVS----------RSGSKLAWLPGVEIVAADAM 50
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV---------LLEAC 124
A + + + G D I H A N Y ++ A
Sbjct: 51 DAS--SVIAAARGADVIYHCA-----------------NPAYTRWEELFPPLMENVVAAA 91
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG---AEM--LVMAY 179
+ G + + +YG G+P P P T+ G AEM ++A
Sbjct: 92 EANG--AKLVLPGNVYMYGPQA-----GSPITEDT-PFQP--TTRKGRIRAEMEERLLAA 141
Query: 180 HRSYGLPTITTRGNNVYGP---NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236
H + + R + YGP N + + ++G+ GN + Y D
Sbjct: 142 HAKGDIRALIVRAPDFYGPGAINSWLGAALFA----ILQGKTAVFPGNLDTPHEWTYLPD 197
Query: 237 VAEAFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT------------- 282
VA A + G +++ + ++ A P+
Sbjct: 198 VARALVTLAEEPDAFGEAWHLPGAGAITTRELIAIAARAAGRPPKVRVIPKWTLRLAGLF 257
Query: 283 ---------IHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTL 322
+ Y+ + PF LD KL+ G TP +E ++ TL
Sbjct: 258 DPLMREIVEMMYLWEEPF-----ILDSSKLEATFGEIPHTPLDEAIRQTL 302
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 17/122 (13%)
Query: 411 LLDDMKRV----RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466
LL+ V R V++ A + G V + E TNV+GTL L + ++ V
Sbjct: 18 LLERGHEVVVIDRLDVVVHLAALVG---VPASWDNPDEDFETNVVGTLNLLEAARKAGVK 74
Query: 467 -LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVI 523
+ ++ +Y +E++ P S Y +K L SY E + L +
Sbjct: 75 RFVYASSASVY-------GSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPV 127
Query: 524 CI 525
I
Sbjct: 128 VI 129
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 405 LEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN 464
L D +L ++ +RP V+N A T +VD ES + N + LA
Sbjct: 36 LTDPEALERLLRAIRPDAVVNTAAYT---DVDGAESDPEKAFAVNALAPQNLARAAARHG 92
Query: 465 VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507
L++ +T Y +D +G ++EDD N + Y ++K
Sbjct: 93 ARLVHISTD--YVFDG---EGKR-PYREDDATN-PLNVYGQSK 128
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 56/191 (29%), Positives = 76/191 (39%), Gaps = 54/191 (28%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KILITGA GFIG ++ RL K D +I D+ +
Sbjct: 1 MKILITGAKGFIGKNLIARL-KEQKDDDIFFYDR------------------------ES 35
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
++L ++L G D I H A N + EF + N+ T LL+A G+ K
Sbjct: 36 DESELDDFLQ---GADFIFHLAGV----NRPKDEAEFESGNVGLTERLLDALTRNGK-KP 87
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
I +S S I +A+ NPY +K AE L+ Y R G P R
Sbjct: 88 PILLS-----------SSI---QAAL---DNPYGKSKLAAEELLQEYARETGAPVYIYRL 130
Query: 193 NNVYG----PN 199
NV+G PN
Sbjct: 131 PNVFGKWCRPN 141
|
This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-06
Identities = 57/287 (19%), Positives = 92/287 (32%), Gaps = 65/287 (22%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL---------------------DYCSS 52
K+LI G G+ G L K +E+ +D L + +
Sbjct: 2 KVLILGGDGYCGWPTALHLSKR--GHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRA 59
Query: 53 LKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FT 110
K L F GD + + LL S D ++HFA Q S + +T
Sbjct: 60 WKELTGKTIE----FYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYT 115
Query: 111 -NNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-----------SQ 158
+NN+ GT LL A K + + T YG +I PE +
Sbjct: 116 QHNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYG----TPNIDIPEGYITIEHNGRRDTL 171
Query: 159 LLPTNP---YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIP-------- 207
P Y +K +M +++G+ VYG +
Sbjct: 172 PYPKQAGSWYHLSKVHDSHNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDY 231
Query: 208 ---------KFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
+F + A G L ++G G R ++ D + ++ L
Sbjct: 232 DGVFGTVLNRFCVQAAIGHPLTVYGKGGQTRGFISIRDTVQCLELAL 278
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 1e-05
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 387 LGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETI 446
L + D + F G R D+ L M++ V +AA + +V E + +E I
Sbjct: 43 LRQEYNDPKLRFFIGDVR--DRERLERAMEQHGVDTVFHAAALK---HVPLVEYNPMEAI 97
Query: 447 RTNVMGTLTLADVCKEKNV 465
+TNV+GT +A+ E V
Sbjct: 98 KTNVLGTENVAEAAIENGV 116
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 19/135 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KI+ITG GFIG +T RL +E+V L SR + L IT
Sbjct: 1 KIVITGGTGFIGRALTRRLTAA--GHEVVVL--------------SRRPGKAEGLAEVIT 44
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF--EFTNNNIYGTHVLLEAC-KLTGQV 130
L G D +++ A + + + E ++ I T VL+EA
Sbjct: 45 WDGLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPAPP 104
Query: 131 KRFIHVSTDEVYGET 145
K I S YG +
Sbjct: 105 KVLISASAVGYYGHS 119
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 48/223 (21%)
Query: 129 QVKRFIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
+K+F+ S+ VY ++D E D P A E AY + G
Sbjct: 156 GLKQFLFCSSAGVYKKSDEPPHVEGDAVKP-----------KAGHLEVE----AYLQKLG 200
Query: 185 LPTITTRGNNVYGPNQ-------FPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
+ + R +YGP F ++L+ +G+ +PI G+G + + D+
Sbjct: 201 VNWTSFRPQYIYGPGNNKDCEEWFFDRLV--------RGRPVPIPGSGIQLTQLGHVKDL 252
Query: 238 AEAF-DVILHRGVIGHVYNVGTKKERSV-LDVAADICTLFKLEPEKTIHYVQDR------ 289
A F V+ + G ++N+ + +R+V D A C PE+ +HY
Sbjct: 253 ASMFALVVGNPKAAGQIFNIVS--DRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAK 310
Query: 290 ---PFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
PF D +F +K K LGW K E LK E Y
Sbjct: 311 KAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGR 353
|
Length = 378 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 7e-05
Identities = 51/192 (26%), Positives = 72/192 (37%), Gaps = 64/192 (33%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVAL------DKLDYCSSLKNLHPSRASPNFKFLK 69
+TG GFIG + +RL+ + + L +L+ + R P L
Sbjct: 4 FVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLE--ALAAYWGADRVVP----LV 57
Query: 70 GDITCADLMNYLLVSEG-------IDTIMHFAA----------QTHVDNSFGNSFEFTNN 112
GD+T L +SE ID ++H AA Q
Sbjct: 58 GDLTEPGLG----LSEADIAELGDIDHVVHLAAIYDLTADEEAQRAA------------- 100
Query: 113 NIYGT-HVLLEACKLTGQVKRFIHVST-------DEVYGETDMESDIGNPEASQLLPTNP 164
N+ GT +V+ A +L F HVS+ + V+ E D + E Q LPT P
Sbjct: 101 NVDGTRNVVELAERLQAAT--FHHVSSIAVAGDYEGVFREDDFD------EG-QGLPT-P 150
Query: 165 YSATKAGAEMLV 176
Y TK AE LV
Sbjct: 151 YHRTKFEAEKLV 162
|
Length = 657 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 19/135 (14%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
ILITG GFIG +T RL K +E+ L + P +
Sbjct: 1 ILITGGTGFIGRALTQRLTKR--GHEVTILTR----------SPPPGANTKWEGYKPWAG 48
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF--EFTNNNIYGTHVLLEACKLTGQV-K 131
D EG D +++ A + D + E ++ I T +L+EA Q K
Sbjct: 49 ED----ADSLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPK 104
Query: 132 RFIHVSTDEVYGETD 146
FI S YG ++
Sbjct: 105 VFISASAVGYYGPSE 119
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 34/165 (20%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-ASPNFKFLKGDIT 73
I + GA G G + L+ +++ AL + +PS+ +P ++ D+
Sbjct: 1 IAVIGATGKTGRRLVKELLAR--GHQVTALSR----------NPSKAPAPGVTPVQKDLF 48
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
DL + G+D + + + + + LL+A G V+R
Sbjct: 49 --DLADLAEALAGVDAV------VDAFGARPDDSDGVKH-------LLDAAARAG-VRRI 92
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
+ VS +Y + +A PY+ KA AE L+ A
Sbjct: 93 VVVSAAGLYRDE--PGTFRLDDAPLF---PPYARAKAAAEELLRA 132
|
Length = 182 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 32/125 (25%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KI I GA G +G + + L+ P + + L PS S N G
Sbjct: 1 KIAIAGATGTLGGPIVSALLA-SPGFTVTVL-----------TRPSSTSSNEFQPSGVKV 48
Query: 74 CADLMNYL--LVS--EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
LV+ +G+D ++ + + L++A G
Sbjct: 49 VPVDYASHESLVAALKGVDAVISALGGAAIGDQ---------------LKLIDAAIAAG- 92
Query: 130 VKRFI 134
VKRFI
Sbjct: 93 VKRFI 97
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 31/134 (23%)
Query: 18 TGAAGFIGSHVTNRL----------IKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
TGA+GFIGS + RL +++ D + VA L L A K
Sbjct: 4 TGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAH--------LLELEG--AKERLKL 53
Query: 68 LKGDITCADLMNYLLVSEGID---TIMHFAAQTHVD-NSFGNSFEFTNNNIYGTHVLLEA 123
K ADL++Y ID + H A + VD +S E + GT +LEA
Sbjct: 54 FK-----ADLLDYGSFDAAIDGCDGVFHVA--SPVDFDSEDPEEEMIEPAVKGTLNVLEA 106
Query: 124 CKLTGQVKRFIHVS 137
C VKR + S
Sbjct: 107 CAKAKSVKRVVFTS 120
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 407 DKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV 465
D++ + M+ + V +AA + +V E + E I+TNV+GT +A+ + V
Sbjct: 313 DRDRVERAMEGHKVDIVFHAAALK---HVPLVEYNPEEAIKTNVLGTENVAEAAIKNGV 368
|
Length = 588 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TGA G++G + RL++ +++ AL S + L S ++GD+
Sbjct: 1 VLVTGATGYVGGRLVPRLLQE--GHQVRAL-----VRSPEKLADRPWSERVTVVRGDLED 53
Query: 75 ADLMNYLLVSEGIDT 89
+ + L EGIDT
Sbjct: 54 PESLRAAL--EGIDT 66
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 30/109 (27%), Positives = 37/109 (33%), Gaps = 25/109 (22%)
Query: 375 LIYGKTGWIGGLL-------GKYCK-----------DKGIAFEFGTGRLEDKNSLLDDMK 416
L+ G TG++G L G + G+ E G L D SL MK
Sbjct: 2 LVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLPVEVVEGDLTDAASLAAAMK 61
Query: 417 RVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV 465
V + A T R E RTNV GT + D E V
Sbjct: 62 GCD--RVFHLAAFT-----SLWAKDRKELYRTNVEGTRNVLDAALEAGV 103
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 65/318 (20%), Positives = 114/318 (35%), Gaps = 63/318 (19%)
Query: 7 PASYKPKKILITGAAGFIG----SHVTNRLIKNYPDYEIVALDKL-----DYCSSLKNLH 57
+S K KK+++ G G+ G H++ R YE+ +D L D+ L +L
Sbjct: 42 SSSSKKKKVMVIGGDGYCGWATALHLSKR------GYEVAIVDNLCRRLFDHQLGLDSLT 95
Query: 58 PSRASPN------------FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGN 105
P + + GDI + ++ S D ++HF Q S +
Sbjct: 96 PIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMID 155
Query: 106 SFE--FT-NNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIG-------NPE 155
FT +NN+ GT +L A K + + T YG +++ + G
Sbjct: 156 RSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRT 215
Query: 156 ASQLLPTNP---YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPN----QFPEKLI-- 206
+ P Y +K + +++G+ VYG E+LI
Sbjct: 216 DTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINR 275
Query: 207 -----------PKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH----RGVIG 251
+F + A G L ++G G R +L D ++ + G
Sbjct: 276 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEF- 334
Query: 252 HVYNVGTKKERSVLDVAA 269
V+N T ++ SV ++A
Sbjct: 335 RVFNQFT-EQFSVNELAK 351
|
Length = 442 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 398 FEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLA 457
F G + DK L K P V +AA + +V E + E I+TNV+GT +
Sbjct: 56 LRFIIGDVRDKERLRRAFKERGPDIVFHAAALK---HVPSMEDNPEEAIKTNVLGTKNVI 112
Query: 458 DVCKEKNV 465
D E V
Sbjct: 113 DAAIENGV 120
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVAL 44
K+L+ GA G +G HV L+ Y++ AL
Sbjct: 1 KVLVVGATGKVGRHVVRELLDR--GYQVRAL 29
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 398 FEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLA 457
F+F G LED+ +L K V++ A G V + + + +N++G L L
Sbjct: 55 FKFVKGDLEDREALRRLFKDHEFDAVIHLAAQAG---VRYSLENPHAYVDSNIVGFLNLL 111
Query: 458 DVCKEKNVLLMNFA-TGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507
++C+ V + +A + +Y ++ P F EDD + S Y+ TK
Sbjct: 112 ELCRHFGVKHLVYASSSSVYGLNTKMP------FSEDDRVDHPISLYAATK 156
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVAL 44
ILITG G IG +T RL K +++ L
Sbjct: 1 ILITGGTGLIGRALTARLRKG--GHQVTIL 28
|
Length = 297 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 684 | |||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.98 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.98 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.98 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.97 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.97 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.96 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.96 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.96 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.96 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.95 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.95 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.95 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.95 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.94 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.94 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.94 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.94 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.93 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.93 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.92 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.92 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.92 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.92 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.91 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.91 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.91 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.91 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.91 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.9 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.9 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.9 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.9 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.89 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.89 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.88 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.87 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.87 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.87 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.86 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.86 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.86 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.85 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.84 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.83 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.83 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.83 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.82 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.81 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.81 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.79 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.79 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.79 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.78 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.78 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.78 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.77 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.77 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.76 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.76 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.76 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.76 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.76 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.74 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.74 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.74 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.71 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.71 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.71 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.7 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.7 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.7 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.7 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.7 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.7 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.69 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.69 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.69 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.69 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.69 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.67 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.67 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.67 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.66 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.66 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.66 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.66 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.65 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.65 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.64 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.64 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.64 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.64 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.64 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.64 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.64 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.63 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.63 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.63 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.63 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.63 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.62 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.62 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.61 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.61 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.61 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.6 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.6 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.6 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.6 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.6 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.6 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.6 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.58 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.58 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.58 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.57 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.57 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.56 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.55 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.55 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.55 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.54 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.54 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.53 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.53 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.52 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.52 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.51 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.5 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.5 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.49 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.49 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.49 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.49 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.49 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.48 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.48 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.48 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.47 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.46 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.46 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.46 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.45 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.45 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.45 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.44 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.44 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.44 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.43 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.43 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.43 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.43 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.43 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.41 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.4 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.4 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.4 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.4 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.39 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.39 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.39 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.38 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.38 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.37 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.37 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.37 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.36 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.36 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.35 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.35 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.35 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.34 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.33 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.32 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.32 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.31 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.31 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.3 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.3 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.29 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.28 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.28 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.27 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.26 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.26 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.26 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.25 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.25 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.25 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.25 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.24 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.24 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.22 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.22 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.22 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.22 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.22 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.21 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.21 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.21 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.2 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.2 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.2 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.2 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.2 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.2 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.19 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.18 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.18 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.18 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.17 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.17 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.16 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.16 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.16 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.16 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.15 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.15 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.14 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.14 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.14 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.13 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.13 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.13 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.11 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.11 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.11 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.11 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.11 |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-81 Score=707.08 Aligned_cols=645 Identities=75% Similarity=1.258 Sum_probs=521.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
..+|+|||||||||||++|++.|++++++++|++++|.........+.......+++++.+|+.|.+.+..++...++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 35689999999999999999999998778999999985322222222222223578999999999988887776678999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|||+|+......++.++...+++|+.++.+|+++|++.+.+++|||+||..+||........+..|+.+..|.++|+.+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 99999987766666677888999999999999999998768999999999999976554333345677778899999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
.++|.+++.+.++++++++++||++|||++..+..+++.++..+..++++.+++++.+.++|+|++|+|+++..++++..
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~ 243 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 99999999998888999999999999999887667888888888888889998999999999999999999999998776
Q ss_pred CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHhCC
Q 035631 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 250 ~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
.+++||+++++.+++.|+++.+.+.+|.++...+...+.+++....+.+|++|+++|||+|+++++|+|+++++|+++++
T Consensus 244 ~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 244 VGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred CCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 77899999999999999999999999976543344444455555567799999999999999999999999999999999
Q ss_pred CcccccccCCCCCCceeeccCCCCCCcccc----ccccc-----------ccccCCceEEEEEcCCcchhHHHHHHHHhc
Q 035631 330 HWWGDVTGALCPHPSVILLTDSCGNDDAFF----LHNGY-----------EICGRSRLKFLIYGKTGWIGGLLGKYCKDK 394 (684)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----------~~~~~~~m~ilItG~~G~iG~~l~~~L~~~ 394 (684)
++|..+.+.+.|+|++.+++...|+...-. ..+.. .-..++.||||||||+||||++|+++|.++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkiLVtGa~G~iG~~l~~~L~~~ 403 (668)
T PLN02260 324 DWWGDVSGALLPHPRMLMMPGVRLFDGSEEIKLSSSGSQTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGKLCEKQ 403 (668)
T ss_pred hhhhccccccccCCCcccccccccccchhhhccccccccccccccccccccCCCCCCceEEEECCCchHHHHHHHHHHhC
Confidence 999999999999999999998866422221 11111 112234579999999999999999999999
Q ss_pred CCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecce
Q 035631 395 GIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGC 474 (684)
Q Consensus 395 g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~ 474 (684)
|++|.+..+|++|.+.+...+...+||+|||||+.++.++.++++.++...+++|+.++.+|+++|++.++++|++||++
T Consensus 404 g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~ 483 (668)
T PLN02260 404 GIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGC 483 (668)
T ss_pred CCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccc
Confidence 99998778899999999999998899999999998865556778889999999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceec
Q 035631 475 IYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISS 554 (684)
Q Consensus 475 vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 554 (684)
||++....+.....|++|++++..|.+.||.||+++|+++.... ...+.|++ ....+
T Consensus 484 v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~---~~~~~r~~--------------------~~~~~ 540 (668)
T PLN02260 484 IFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD---NVCTLRVR--------------------MPISS 540 (668)
T ss_pred eecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh---hheEEEEE--------------------Eeccc
Confidence 99754322212223488888777345899999999998754421 22223333 21112
Q ss_pred CCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchh
Q 035631 555 DLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
.....++|+..+++....+..+.+..+++|++.+++.+++...+|+||+++++.+|+.|+++.+.+.++....+.++...
T Consensus 541 ~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~ 620 (668)
T PLN02260 541 DLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLE 620 (668)
T ss_pred CCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHH
Confidence 22235588888887777666677789999999999988876567999999999999999999999988533335667666
Q ss_pred Hhh--hhhccCCCCCcCCchhhhhcCCCchhHHHHHHHHHhhccccc
Q 035631 635 EQA--KVLVAPRSNNHMDVTKLKKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 635 ~~~--~~~~~~~~~~~~d~~kl~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+.+ ....||. + .+|++|++..++..++|+++|++++.+..++.
T Consensus 621 ~~~~~~~a~rp~-~-~l~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~ 665 (668)
T PLN02260 621 EQAKVIVAPRSN-N-EMDASKLKKEFPELLSIKESLIKYVFEPNKKT 665 (668)
T ss_pred HhhhHhhCCCcc-c-cccHHHHHHhCccccchHHHHHHHHhhhhhhc
Confidence 666 5566777 5 89999995544448999999999998766543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-52 Score=385.47 Aligned_cols=326 Identities=43% Similarity=0.780 Sum_probs=301.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|++|||||.||||+++++.++++.+..+|+.+++....+....+......++..++++|+.|.+.+.+++...++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999999878889999999888888887777777899999999999999999998789999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+..+.+.+..+|...++.|+.||.+||+++++.....||+|+||..|||.-.... ...+|.+|..|.++|++||+.+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~-~~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD-DAFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC-CCcccCCCCCCCCCcchhhhhH
Confidence 999999999999999999999999999999999976335999999999999865532 2457999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCc
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 252 (684)
..+++.|.+.+|++++|.|+++-|||.+++..++|.++.++..+++++++|+|.+.|||+||+|-++|+..++.+...|+
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE 239 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCc---ceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhC
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEK---TIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
+|||+++...+--|+++.|.+.+|...+. .+.+..+++.....+.+|.+|++. |||+|.++++++|+++++||.++
T Consensus 240 ~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N 319 (340)
T COG1088 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDN 319 (340)
T ss_pred eEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987652 477788888888899999999755 99999999999999999999999
Q ss_pred CCcccccccCC
Q 035631 329 PHWWGDVTGAL 339 (684)
Q Consensus 329 ~~~~~~~~~~~ 339 (684)
..||+.+....
T Consensus 320 ~~Ww~~l~~~~ 330 (340)
T COG1088 320 EWWWEPLKDGE 330 (340)
T ss_pred hHHHhhhhccc
Confidence 99998866543
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=352.25 Aligned_cols=316 Identities=63% Similarity=1.111 Sum_probs=292.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.++||||||+||||++.+..+..+.+.+..+.++.-...+.++.+.+....++.+++.+|+.+...+..++....+|.||
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 37999999999999999999999999999999998877777777877777889999999999999999999888999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|.|+....+.+..++......|+.++..|+++++.+|++++|||+||..|||...+.... .|.+.++|.++|+++|++
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~--~E~s~~nPtnpyAasKaA 163 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVV--GEASLLNPTNPYAASKAA 163 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccc--cccccCCCCCchHHHHHH
Confidence 999999999999999999999999999999999999889999999999999998776442 388999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCC
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 251 (684)
+|..++.|..+++++++++|.++||||++.+..+++.|+..+..+++.++.++|.+.|+|+|++|+++++..++++...+
T Consensus 164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~g 243 (331)
T KOG0747|consen 164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELG 243 (331)
T ss_pred HHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCC-----CCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHH
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKL-----EPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~-----~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~ 326 (684)
++|||+++.+++..|+++.|.+.+.. ..+..+.+.++++.....+.++.+|++.|||+|+++|+++|+.+++||.
T Consensus 244 eIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~ 323 (331)
T KOG0747|consen 244 EIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYT 323 (331)
T ss_pred ceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHHHH
Confidence 99999999999999999999888765 3344566778888888889999999999999999999999999999998
Q ss_pred hCC
Q 035631 327 KNP 329 (684)
Q Consensus 327 ~~~ 329 (684)
.+.
T Consensus 324 ~~~ 326 (331)
T KOG0747|consen 324 KNF 326 (331)
T ss_pred hhh
Confidence 764
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-46 Score=348.61 Aligned_cols=304 Identities=31% Similarity=0.466 Sum_probs=264.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+||||||+||||+|.+.+|+++ |++|+++|...+.. ...+.. ...+++++|+.|.+.+.+.|+..++|.|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~-~~~v~~----~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGH-KIALLK----LQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCC-HHHhhh----ccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 68999999999999999999999 99999999865322 222211 116899999999999999999999999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+||......+-++|...++.|+.+|.+|+++|++.+ +++|||.||+.|||.... .+..|+.+..|.++||.||.+.
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~---~PI~E~~~~~p~NPYG~sKlm~ 149 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTT---SPISETSPLAPINPYGRSKLMS 149 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCC---cccCCCCCCCCCCcchhHHHHH
Confidence 999999999999999999999999999999999998 999999999999998876 4458999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCC------C---CCChHHHHHHHHHcC-CceEEec------CCCceEecccHHH
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ------F---PEKLIPKFILLAMKG-QQLPIHG------NGSNVRSYLYCAD 236 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~------~---~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D 236 (684)
|++++.+.+.+++++++||.+++.|... . .+++++.+++.+... ..+.++| ||+-.||||||.|
T Consensus 150 E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~D 229 (329)
T COG1087 150 EEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229 (329)
T ss_pred HHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhH
Confidence 9999999999999999999999998632 1 235788877776644 4477766 4788899999999
Q ss_pred HHHHHHHHHhc---CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccC
Q 035631 237 VAEAFDVILHR---GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT 312 (684)
Q Consensus 237 ~a~~i~~~~~~---~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~ 312 (684)
+|++.+++++. .....+||+|+|+..|+.|+++++.++.|.+.+ ....+.++......+.|.+|+++ |||+|++
T Consensus 230 LA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip--~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~ 307 (329)
T COG1087 230 LADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP--VEIAPRRAGDPAILVADSSKARQILGWQPTY 307 (329)
T ss_pred HHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCc--eeeCCCCCCCCceeEeCHHHHHHHhCCCccc
Confidence 99999999863 223369999999999999999999999997654 77778888888899999999998 9999999
Q ss_pred -CHHHHHHHHHHHHH-hCC
Q 035631 313 -PWEEGLKLTLEWYK-KNP 329 (684)
Q Consensus 313 -~~~e~i~~~i~~~~-~~~ 329 (684)
++++.+++.+.|.+ +++
T Consensus 308 ~~L~~ii~~aw~W~~~~~~ 326 (329)
T COG1087 308 DDLEDIIKDAWDWHQQRHG 326 (329)
T ss_pred CCHHHHHHHHHHHhhhhcC
Confidence 89999999999998 444
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=364.30 Aligned_cols=311 Identities=28% Similarity=0.385 Sum_probs=251.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCC---CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHP---SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
.+|+|||||||||||++|+++|+++ |++|++++|...... ...+.. .....+++++.+|+.|.+.+..++ .
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~--~ 89 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC--K 89 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--h
Confidence 4589999999999999999999999 899999998542111 111100 111246789999999999998888 5
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
++|+|||+|+......+..++...+++|+.++.+|+++|++.+ +++|||+||.++||.....+ ..|..+..|.++|
T Consensus 90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~---~~e~~~~~p~~~Y 165 (348)
T PRK15181 90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLP---KIEERIGRPLSPY 165 (348)
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCC---CCCCCCCCCCChh
Confidence 7999999999876655667788899999999999999999987 89999999999999654322 2455567788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
+.+|.++|.+++.+.++++++++++||++||||++.+. .+++.++..+..++++.+++++.+.++|+|++|+|+++
T Consensus 166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~ 245 (348)
T PRK15181 166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN 245 (348)
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 99999999999999888899999999999999976433 46888888888888899889999999999999999999
Q ss_pred HHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHHhCCCCC----cceeeccCCCCCCcceecCHHHHHh-cCCcccCC
Q 035631 242 DVILHRG---VIGHVYNVGTKKERSVLDVAADICTLFKLEPE----KTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTP 313 (684)
Q Consensus 242 ~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~----~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~ 313 (684)
+.++... ..+++||+++++.+|+.|+++.+.+.++.... ..+...+.++.......+|++|+++ |||+|+++
T Consensus 246 ~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~s 325 (348)
T PRK15181 246 LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFD 325 (348)
T ss_pred HHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCC
Confidence 8877543 24689999999999999999999998874211 1111222222233456789999988 99999999
Q ss_pred HHHHHHHHHHHHHhCC
Q 035631 314 WEEGLKLTLEWYKKNP 329 (684)
Q Consensus 314 ~~e~i~~~i~~~~~~~ 329 (684)
++|+|+++++|++.+.
T Consensus 326 l~egl~~~~~w~~~~~ 341 (348)
T PRK15181 326 IKEGLKQTLKWYIDKH 341 (348)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=352.49 Aligned_cols=318 Identities=42% Similarity=0.727 Sum_probs=254.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEE-EEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIV-ALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~-~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|++|||||||||||+++++.|+++ |++++ +++|.........+........++++.+|+.|.+.+.+++...++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 368999999999999999999999 66644 445432211111111111223578889999999999999865579999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc--------CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT--------GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT 162 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 162 (684)
||+||.........++...+++|+.++.+++++|++. ..+++||++||.++||..... ..+.+|+.+..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~E~~~~~p~ 157 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST-DDFFTETTPYAPS 157 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC-CCCcCCCCCCCCC
Confidence 9999987655455677889999999999999999863 236899999999999864322 1234677777889
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
+.|+.+|.++|.+++.++++++++++++||+++|||+..+..+++.++..+..++++.+++++++.++|+|++|+++++.
T Consensus 158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~ 237 (355)
T PRK10217 158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237 (355)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence 99999999999999999888899999999999999998666788888888888888888899999999999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCc----------ceeeccCCCCCCcceecCHHHHHh-cCCccc
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK----------TIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~----------~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~ 311 (684)
.+++....+++||+++++.+|+.|+++.+.+.++...+. .+...+..+.....+.+|++|+++ |||+|+
T Consensus 238 ~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 317 (355)
T PRK10217 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQ 317 (355)
T ss_pred HHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCc
Confidence 999876667899999999999999999999998753211 111122223333456789999977 999999
Q ss_pred CCHHHHHHHHHHHHHhCCCcc
Q 035631 312 TPWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 312 ~~~~e~i~~~i~~~~~~~~~~ 332 (684)
++++|+|+++++|++.+..||
T Consensus 318 ~~l~e~l~~~~~~~~~~~~~~ 338 (355)
T PRK10217 318 ETFESGMRKTVQWYLANESWW 338 (355)
T ss_pred CcHHHHHHHHHHHHHhCHHHH
Confidence 999999999999999998755
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=377.51 Aligned_cols=446 Identities=21% Similarity=0.193 Sum_probs=310.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH------HHHHHhhccCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA------DLMNYLLVSEG 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~ 86 (684)
|+|||||||||||++|++.|++...+++|++++|+........+.......+++++.+|+.|. +.+.. + .+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~-l--~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE-L--GD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH-h--cC
Confidence 589999999999999999999522289999999964322222211111125689999999984 33433 3 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
+|+|||||+..... .+.....++|+.++.+++++|++.+ +++|||+||..+||.......+ .....+..+.+.|+
T Consensus 78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e-~~~~~~~~~~~~Y~ 152 (657)
T PRK07201 78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFRE-DDFDEGQGLPTPYH 152 (657)
T ss_pred CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCcccc-ccchhhcCCCCchH
Confidence 99999999976533 3456778999999999999999987 8999999999999865432211 01112334557899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHc-CCceEEecCCCceEecccHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMK-GQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
.+|.++|+++++ ..+++++++||++|||+..... .++..++..... ...++..+.+...++++|++|++
T Consensus 153 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva 229 (657)
T PRK07201 153 RTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVA 229 (657)
T ss_pred HHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHH
Confidence 999999999964 3489999999999999854211 012222322211 12234445556678999999999
Q ss_pred HHHHHHHhcC-CCCcEEEecCCCccCHHHHHHHHHHHhCCCC---Ccc-eeec-----cC---------------CC---
Q 035631 239 EAFDVILHRG-VIGHVYNVGTKKERSVLDVAADICTLFKLEP---EKT-IHYV-----QD---------------RP--- 290 (684)
Q Consensus 239 ~~i~~~~~~~-~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~---~~~-~~~~-----~~---------------~~--- 290 (684)
+++..++..+ ..+++||+++++++++.|+++.+.+.+|.+. ... +... .. ..
T Consensus 230 ~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (657)
T PRK07201 230 DALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPP 309 (657)
T ss_pred HHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCH
Confidence 9999998754 3568999999999999999999999998765 110 1100 00 00
Q ss_pred ----CCCcceecCHHHHHh-c---CCcccCCHHHHHHHHHHHHHhCCCcccccccCCCCCCceeeccCCCCCCccccccc
Q 035631 291 ----FNDHRYFLDDQKLKR-L---GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHN 362 (684)
Q Consensus 291 ----~~~~~~~~d~~k~~~-l---g~~p~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (684)
+......+|++++++ | |+.. .++++.+...++|+.++.+.... .++...
T Consensus 310 ~~l~~~~~~~~f~~~~~~~~L~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~----- 366 (657)
T PRK07201 310 EVLDFVNYPTTFDSRETRAALKGSGIEV-PRLASYAPRLWDYWERHLDPDRA-----------------RRRDLR----- 366 (657)
T ss_pred HHHHhccCCCeeccHHHHHHhccCCcCC-CChHHHHHHHHHHHHhcCChhhh-----------------cccCcc-----
Confidence 011234678888876 5 4444 36788888888877666422100 000000
Q ss_pred ccccccCCceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc
Q 035631 363 GYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV 418 (684)
Q Consensus 363 ~~~~~~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~ 418 (684)
..+..++++||||+|+||.++++.|+++|++| .++.+|++|.+++.++++..
T Consensus 367 ----~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 367 ----GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred ----cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 01123589999999999999999999999865 45678999999998888754
Q ss_pred -----CCCeEEEcceecCCCCcccc---ccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCC
Q 035631 419 -----RPTHVLNAAGITGRPNVDWC---ESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQG 485 (684)
Q Consensus 419 -----~~d~Vih~a~~~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~ 485 (684)
++|++||+||.......... .+.....+++|+.++.++.+++.. .+ .++|++||...|.+.+
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 517 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----- 517 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----
Confidence 57999999996521111111 134567899999999988777643 33 3799999987774211
Q ss_pred CCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 486 SSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 486 ~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 518 -------------~~~~Y~~sK~a~~~~~ 533 (657)
T PRK07201 518 -------------RFSAYVASKAALDAFS 533 (657)
T ss_pred -------------CcchHHHHHHHHHHHH
Confidence 2357999999998774
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=343.55 Aligned_cols=318 Identities=43% Similarity=0.716 Sum_probs=252.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|||||||||||||++++++|+++ |+ .|+++++.........+........++++.+|+.|.+.+.+++...++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 58999999999999999999999 55 4666665432111111111111245788999999999999998666799999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc--------CCCcEEEEEeCcccccCCCCCC-------CCCCCCC
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT--------GQVKRFIHVSTDEVYGETDMES-------DIGNPEA 156 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~i~~SS~~vyg~~~~~~-------~~~~~e~ 156 (684)
|+|+.........++...+++|+.++.+++++|++. +.+++||++||.++||...... ....+|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 999976544445567789999999999999999874 2257999999999998632110 0123577
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
.+..|.+.|+.+|.++|.+++.+++.++++++++|++.||||+..+..+++.++..+..+.++.+++++++.++|+|++|
T Consensus 159 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (352)
T PRK10084 159 TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (352)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHH
Confidence 78889999999999999999999888899999999999999987666778888888888888888899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc------eeeccCCCCCCcceecCHHHHHh-cCCc
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT------IHYVQDRPFNDHRYFLDDQKLKR-LGWK 309 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~------~~~~~~~~~~~~~~~~d~~k~~~-lg~~ 309 (684)
+|+++..++++...+++||+++++..++.|+++.+.+.+|...+.. +......+.....+.+|++|+++ +||+
T Consensus 239 ~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 318 (352)
T PRK10084 239 HARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWK 318 (352)
T ss_pred HHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCC
Confidence 9999999998766678999999999999999999999998532211 11112223333456789999987 9999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCcc
Q 035631 310 EKTPWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~~~~ 332 (684)
|+++++++|+++++|++++++|.
T Consensus 319 p~~~l~~~l~~~~~~~~~~~~~~ 341 (352)
T PRK10084 319 PQETFESGIRKTVEWYLANTEWV 341 (352)
T ss_pred CcCCHHHHHHHHHHHHHhCHHHh
Confidence 99999999999999999987543
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=346.00 Aligned_cols=300 Identities=26% Similarity=0.432 Sum_probs=243.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.|||||||||||||++|+++|+++ |++|++++|..... ...+........++++.+|+.+.. + .++|+||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~-~~~~~~~~~~~~~~~~~~Di~~~~-----~--~~~D~Vi 189 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGR-KENLVHLFGNPRFELIRHDVVEPI-----L--LEVDQIY 189 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcc-HhHhhhhccCCceEEEECcccccc-----c--cCCCEEE
Confidence 479999999999999999999999 89999999853211 111111111246788888887642 3 5799999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC-----CCCCCCChhH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-----SQLLPTNPYS 166 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~Y~ 166 (684)
|||+.........++...++.|+.++.+|+++|++.+ .+|||+||.+|||.....+ .+|+ .+..|.+.|+
T Consensus 190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p---~~E~~~~~~~p~~p~s~Yg 264 (436)
T PLN02166 190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHP---QKETYWGNVNPIGERSCYD 264 (436)
T ss_pred ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCC---CCccccccCCCCCCCCchH
Confidence 9999766544456788899999999999999999987 4899999999999754322 2332 4666788999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
.+|.++|++++.+++.++++++++||+++||+++.. ..+++.++..+..++++.+++++++.++|+|++|+++++..+
T Consensus 265 ~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~ 344 (436)
T PLN02166 265 EGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVAL 344 (436)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 999999999999988889999999999999997532 357788888888899999889999999999999999999999
Q ss_pred HhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHH
Q 035631 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLE 323 (684)
Q Consensus 245 ~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~ 323 (684)
++... .++||+++++.+|+.|+++.+.+.+|.+.. +.+.+..........+|++|+++ |||+|+++++++|+++++
T Consensus 345 ~~~~~-~giyNIgs~~~~Si~ela~~I~~~~g~~~~--i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~ 421 (436)
T PLN02166 345 MEGEH-VGPFNLGNPGEFTMLELAEVVKETIDSSAT--IEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVS 421 (436)
T ss_pred HhcCC-CceEEeCCCCcEeHHHHHHHHHHHhCCCCC--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 97644 569999999999999999999999986543 44444333333456789999998 999999999999999999
Q ss_pred HHHhCC
Q 035631 324 WYKKNP 329 (684)
Q Consensus 324 ~~~~~~ 329 (684)
|++.+.
T Consensus 422 ~~~~~~ 427 (436)
T PLN02166 422 DFRNRI 427 (436)
T ss_pred HHHHHh
Confidence 997654
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=346.69 Aligned_cols=319 Identities=21% Similarity=0.275 Sum_probs=243.3
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-c----cccCCC------------CCCCCCceEEE
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-S----LKNLHP------------SRASPNFKFLK 69 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~----~~~l~~------------~~~~~~~~~~~ 69 (684)
++..++|+||||||+||||++|+++|+++ |++|++++|..... . ...+.+ .....+++++.
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 34556789999999999999999999999 89999987532111 0 000000 00123688999
Q ss_pred ecCCCHHHHHHhhccCCCCEEEEcCccCCcCCCCCCh---HHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEeCcccccCC
Q 035631 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNS---FEFTNNNIYGTHVLLEACKLTGQVK-RFIHVSTDEVYGET 145 (684)
Q Consensus 70 ~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~---~~~~~~n~~~~~~ll~~~~~~~~~~-~~i~~SS~~vyg~~ 145 (684)
+|+.|.+.+..++...++|+|||+|+......+..++ ...+++|+.++.+++++|++.+ ++ +||++||..+||..
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC
Confidence 9999999999998666899999999875443333333 4567899999999999999987 64 99999999999964
Q ss_pred CCCCCC---CCC----CC---CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC------------
Q 035631 146 DMESDI---GNP----EA---SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE------------ 203 (684)
Q Consensus 146 ~~~~~~---~~~----e~---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~------------ 203 (684)
.....+ ..+ |+ .+..|.++|+.+|.++|.+++.+++.++++++++||++||||++...
T Consensus 199 ~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~ 278 (442)
T PLN02572 199 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDY 278 (442)
T ss_pred CCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCc
Confidence 321110 011 22 35678899999999999999999999999999999999999975331
Q ss_pred -----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-CC--cEEEecCCCccCHHHHHHHHHHH-
Q 035631 204 -----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-IG--HVYNVGTKKERSVLDVAADICTL- 274 (684)
Q Consensus 204 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~--~~~ni~~~~~~t~~e~~~~i~~~- 274 (684)
.+++.++..+..++++.+++++++.|+|+|++|+|++++.++++.. .+ .+||+++ +.+|+.|+++.+.+.
T Consensus 279 ~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~ 357 (442)
T PLN02572 279 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAG 357 (442)
T ss_pred ccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHH
Confidence 3566677777788888888999999999999999999999998642 33 5899986 679999999999999
Q ss_pred --hCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccC---CHHHHHHHHHHHHHhCC
Q 035631 275 --FKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKT---PWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 275 --~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~---~~~e~i~~~i~~~~~~~ 329 (684)
+|.+........+........+..|.+|+++|||+|++ ++++++.+++.||+.+.
T Consensus 358 ~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~ 417 (442)
T PLN02572 358 EKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRV 417 (442)
T ss_pred HhhCCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence 77654321111111122223456799999889999998 89999999999998665
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=342.00 Aligned_cols=303 Identities=25% Similarity=0.425 Sum_probs=241.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.|||||||||||||++|+++|+++ |++|++++|.... ....+.......+++++.+|+.+.. + .++|+||
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~-~~~~~~~~~~~~~~~~i~~D~~~~~-----l--~~~D~Vi 188 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTG-RKENVMHHFSNPNFELIRHDVVEPI-----L--LEVDQIY 188 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCcc-chhhhhhhccCCceEEEECCccChh-----h--cCCCEEE
Confidence 489999999999999999999999 8999999875321 1111111112346788889987653 3 4799999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCC--CCCCCCCCCChhHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN--PEASQLLPTNPYSATK 169 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~--~e~~~~~p~~~Y~~sK 169 (684)
|||+.........++...++.|+.++.+|+++|++.+ + +|||+||..+||.....+..+. .+..|..+.+.|+.+|
T Consensus 189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK 266 (442)
T PLN02206 189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 266 (442)
T ss_pred EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHH
Confidence 9999765544456788899999999999999999987 4 8999999999986543222111 1123555678999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.++|.+++.+.+.++++++++||+++|||+.. ...+++.++..+..++++.+++++++.++|+|++|+|++++.+++.
T Consensus 267 ~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 267 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc
Confidence 99999999998888999999999999999753 2457788888888888899889999999999999999999999876
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~ 326 (684)
.. +++||+++++.+|+.|+++.+.+.+|.+.. +.+.+..........+|++|+++ |||+|+++++|+|+++++|++
T Consensus 347 ~~-~g~yNIgs~~~~sl~Elae~i~~~~g~~~~--i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~ 423 (442)
T PLN02206 347 EH-VGPFNLGNPGEFTMLELAKVVQETIDPNAK--IEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFR 423 (442)
T ss_pred CC-CceEEEcCCCceeHHHHHHHHHHHhCCCCc--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 53 569999999999999999999999986543 33333333334456789999988 999999999999999999997
Q ss_pred hCC
Q 035631 327 KNP 329 (684)
Q Consensus 327 ~~~ 329 (684)
+..
T Consensus 424 ~~~ 426 (442)
T PLN02206 424 QRV 426 (442)
T ss_pred Hhh
Confidence 654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=337.23 Aligned_cols=305 Identities=24% Similarity=0.381 Sum_probs=241.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCC-CHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT-CADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~d~V 90 (684)
||+|||||||||||++|+++|++++ +++|++++|+.. ....+ ....+++++.+|+. +.+.+.+++ .++|+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~--~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~--~~~d~V 72 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTD--RLGDL---VNHPRMHFFEGDITINKEWIEYHV--KKCDVI 72 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHH--HHHHh---ccCCCeEEEeCCCCCCHHHHHHHH--cCCCEE
Confidence 3689999999999999999999863 599999998531 11111 11246899999997 667777777 589999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC------C-CCCCC
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS------Q-LLPTN 163 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~------~-~~p~~ 163 (684)
||+|+.........++...+++|+.++.+++++|++.+ ++|||+||..+||.....+. +|+. + ..|.+
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~---~ee~~~~~~~~~~~p~~ 147 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF---DPEASPLVYGPINKPRW 147 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc---CccccccccCcCCCccc
Confidence 99999766555567888899999999999999999976 79999999999986543221 2221 1 24667
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--------CCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF--------PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.|+.+|.++|+.++.++..++++++++||+++|||+.. ...+++.++..+..++++.+.+++++.++|+|++
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence 89999999999999998888999999999999999742 1357888888888898888888889999999999
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCC-CccCHHHHHHHHHHHhCCCCCcc-----eeec--cCC------CCCCcceec
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTK-KERSVLDVAADICTLFKLEPEKT-----IHYV--QDR------PFNDHRYFL 298 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~-~~~t~~e~~~~i~~~~g~~~~~~-----~~~~--~~~------~~~~~~~~~ 298 (684)
|+++++..+++++ ..+++||++++ ..+|+.|+++.+.+.++..+... +... +.. .........
T Consensus 228 D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (347)
T PRK11908 228 DGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVP 307 (347)
T ss_pred HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccC
Confidence 9999999999875 34689999987 57999999999999998644320 1110 000 011124456
Q ss_pred CHHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 299 DDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 299 d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
|++|+++ |||+|+++++++++++++|++++.
T Consensus 308 d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~ 339 (347)
T PRK11908 308 KIDNTMQELGWAPKTTMDDALRRIFEAYRGHV 339 (347)
T ss_pred ChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 8899987 999999999999999999998765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=311.40 Aligned_cols=275 Identities=20% Similarity=0.220 Sum_probs=235.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe--------------------------EeeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA--------------------------FEFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~--------------------------v~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
|++|||||+||||++++++++++..+ +.|+++|++|.+.+.++++..++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 68999999999999999999988752 2789999999999999999989999999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
+||.+ +++.+-..|..+.++||.||.+||++++++.. ||+++||..|||...... ..++|+++.+ |.|+|
T Consensus 81 fAAES---HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~----~~FtE~tp~~-PsSPY 152 (340)
T COG1088 81 FAAES---HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD----DAFTETTPYN-PSSPY 152 (340)
T ss_pred echhc---cccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC----CCcccCCCCC-CCCCc
Confidence 99988 89999999999999999999999999999874 899999999999654321 1389999999 99999
Q ss_pred hhhhHhHhhh--hhHHhhhhhhhhhhhh-hhh----HHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 504 SKTKAMVTFL--SYLEIFVLVICIECLI-NFQ----VEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 504 ~~sK~~~E~~--~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
+.||+.++.+ +|...++.++.+.++. +++ ++.+.+.....+..+.+++++|+|.+.|||
T Consensus 153 SASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDW-------------- 218 (340)
T COG1088 153 SASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDW-------------- 218 (340)
T ss_pred chhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeee--------------
Confidence 9999999988 5667777888775555 454 345788888888999999999999999999
Q ss_pred CCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCccc-----ccCCchhHhhhhhccCCCCCcCC
Q 035631 577 NSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLK-----WSNFNLEEQAKVLVAPRSNNHMD 650 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~d 650 (684)
+||+|-|+|+..++++. .+.+|||+++...+..|+++.|++.+|+... +..+. +.....+ .+.+|
T Consensus 219 ---l~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~-----DRpGHD~-RYaid 289 (340)
T COG1088 219 ---LYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE-----DRPGHDR-RYAID 289 (340)
T ss_pred ---EEeHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc-----CCCCCcc-ceeec
Confidence 99999999999999988 5559999999999999999999999997544 22111 1111223 67899
Q ss_pred chhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 651 VTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 651 ~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.+|+ +++|.++.++++||++++++..+
T Consensus 290 ~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~ 318 (340)
T COG1088 290 ASKIKRELGWRPQETFETGLRKTVDWYLD 318 (340)
T ss_pred hHHHhhhcCCCcCCCHHHHHHHHHHHHHh
Confidence 9998 77899999999999999987654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=331.86 Aligned_cols=316 Identities=44% Similarity=0.802 Sum_probs=257.0
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
+|||||||||||++++++|++.++.++|++++|.........+......++++++.+|+.|.+.+.++++..++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 59999999999999999999985448999998743211111111111224688999999999999999865569999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 173 (684)
|+......+..++...+++|+.++.+++++|++.+...++|++||..+||...... +.+|..+..|.+.|+.+|..+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~--~~~e~~~~~~~~~Y~~sK~~~e 158 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD--AFTETTPLAPSSPYSASKAASD 158 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC--CcCCCCCCCCCCchHHHHHHHH
Confidence 99876555556777889999999999999999865234899999999999754321 2466677788899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCcE
Q 035631 174 MLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHV 253 (684)
Q Consensus 174 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 253 (684)
.+++.++.+.+++++++||+.+||+...+..+++.++..+..++++++++++++.++|+|++|+++++..++++...+++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 238 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGET 238 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCce
Confidence 99999888889999999999999998766678888888888888888888898999999999999999999987767789
Q ss_pred EEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCCCcc
Q 035631 254 YNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 254 ~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~ 332 (684)
||++++++++++|+++.+.+.+|..+. .+.+....+.....+.+|++|+++ |||+|+++++++++++++||+++.-||
T Consensus 239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~ 317 (317)
T TIGR01181 239 YNIGGGNERTNLEVVETILELLGKDED-LITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWWW 317 (317)
T ss_pred EEeCCCCceeHHHHHHHHHHHhCCCcc-cccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999986432 222222222223344689999987 999999999999999999999888665
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=334.15 Aligned_cols=308 Identities=25% Similarity=0.282 Sum_probs=243.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc---ccccCCC---CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS---SLKNLHP---SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
|+||||||+||||++|+++|+++ |++|++++|+.... ....+.. .....+++++.+|+.|.+.+.+++...+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 58999999999999999999999 89999999875311 1111110 0012468899999999999999997667
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC---cEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV---KRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
+|+|||+|+......+..++....++|+.++.+++++|++.+ + ++|||+||.++||..... +.+|+.+..|.+
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~---~~~E~~~~~p~~ 154 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEI---PQNETTPFYPRS 154 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCC---CCCCCCCCCCCC
Confidence 999999999876554555677788999999999999999876 4 489999999999975432 346777888999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCc-eEEecCCCceEecccHHHHHH
Q 035631 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE---KLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~ 239 (684)
+|+.||.++|.+++.+++++++++++.|+.++|||+.... ..+..++..+..+++ ..+++++++.++|+|++|+|+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~ 234 (343)
T TIGR01472 155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE 234 (343)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence 9999999999999999888899999999999999964322 234455555666653 345588899999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCc-----------------ceeecc--CCCCCCcceecCH
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK-----------------TIHYVQ--DRPFNDHRYFLDD 300 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~-----------------~~~~~~--~~~~~~~~~~~d~ 300 (684)
+++.+++++. +++|||++++++|+.|+++.+.+.+|.+... .+.... .++........|+
T Consensus 235 a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 313 (343)
T TIGR01472 235 AMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDA 313 (343)
T ss_pred HHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCH
Confidence 9999998654 4689999999999999999999999864321 011111 1233334456799
Q ss_pred HHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 301 QKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 301 ~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
+|+++ |||+|+++++++|+++++++++
T Consensus 314 ~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 314 TKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 99988 9999999999999999998874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=336.93 Aligned_cols=310 Identities=24% Similarity=0.318 Sum_probs=237.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.|||||||||||||++|++.|++++ +++|++++|+.. ....+... ....+++++.+|+.|.+.+.+++ .++|
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~--~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~--~~~d 88 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYND--KIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI--KMAD 88 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCch--hhhhhhccccccCCCCeEEEEcCCCChHHHHHHh--hcCC
Confidence 4789999999999999999999983 489999998642 11111111 11246899999999999999988 5799
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCC---CC---------CCC
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDI---GN---------PEA 156 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~---~~---------~e~ 156 (684)
+|||+|+.........++...+..|+.++.+++++|++.+ ++|||+||.++||........ +. .|+
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~ 166 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKED 166 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccccc
Confidence 9999999765443445666778899999999999999876 799999999999965321110 00 111
Q ss_pred CC-------CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-----------CChHHHHHHHHHcCCc
Q 035631 157 SQ-------LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP-----------EKLIPKFILLAMKGQQ 218 (684)
Q Consensus 157 ~~-------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~-----------~~~~~~~~~~~~~~~~ 218 (684)
.+ ..|.+.|+.+|.++|++++.+++.++++++++||++||||+... ..+++.++..+..+++
T Consensus 167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 246 (386)
T PLN02427 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP 246 (386)
T ss_pred ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence 11 12456899999999999999888889999999999999997421 2355566677778888
Q ss_pred eEEecCCCceEecccHHHHHHHHHHHHhcCC--CCcEEEecCC-CccCHHHHHHHHHHHhCCCCCcc---e--eeccCC-
Q 035631 219 LPIHGNGSNVRSYLYCADVAEAFDVILHRGV--IGHVYNVGTK-KERSVLDVAADICTLFKLEPEKT---I--HYVQDR- 289 (684)
Q Consensus 219 ~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~--~~~~~ni~~~-~~~t~~e~~~~i~~~~g~~~~~~---~--~~~~~~- 289 (684)
+.+++++.+.++|+|++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|...... . ...+..
T Consensus 247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 326 (386)
T PLN02427 247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE 326 (386)
T ss_pred eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc
Confidence 8888888899999999999999999998753 4679999987 59999999999999988421100 0 001111
Q ss_pred -----CCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhC
Q 035631 290 -----PFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 290 -----~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
.........|.+|+++ |||+|+++++++|+++++|++..
T Consensus 327 ~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~ 371 (386)
T PLN02427 327 FYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT 371 (386)
T ss_pred ccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence 1122445679999987 99999999999999999998765
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=296.81 Aligned_cols=304 Identities=31% Similarity=0.503 Sum_probs=258.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+.++|+||||.||||+||++.|... |++|+++|.... +....+......++++.+.-|+..+ ++ ..+|.|
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~hdv~~p-----l~--~evD~I 95 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFT-GRKENLEHWIGHPNFELIRHDVVEP-----LL--KEVDQI 95 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccc-cchhhcchhccCcceeEEEeechhH-----HH--HHhhhh
Confidence 4589999999999999999999999 899999997642 3444555555667888888887654 45 688999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC--CCCCCCChhHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA--SQLLPTNPYSAT 168 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~--~~~~p~~~Y~~s 168 (684)
+|||+..++.....+|.+.+..|+.++.+++-.|++.+ +||+++||+.|||+...-+....... .|..|.+.|...
T Consensus 96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydeg 173 (350)
T KOG1429|consen 96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEG 173 (350)
T ss_pred hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHH
Confidence 99999998888888999999999999999999999988 99999999999998654443222221 355577889999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC--CCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ--FPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
|..+|.++..|.++.|+.+.|.|+.+.|||.. .+.++++.++.++.+++++.++++|.+.|+|.|+.|+++.++++++
T Consensus 174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME 253 (350)
T ss_pred HHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc
Confidence 99999999999999999999999999999964 3468899999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHH
Q 035631 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325 (684)
Q Consensus 247 ~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~ 325 (684)
++..+ .+|||+++.+|+.|+++.+.+..+... .+.+....+.....-.-|++++++ |||.|+++++|+|..++.|+
T Consensus 254 s~~~~-pvNiGnp~e~Tm~elAemv~~~~~~~s--~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~f 330 (350)
T KOG1429|consen 254 SDYRG-PVNIGNPGEFTMLELAEMVKELIGPVS--EIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYF 330 (350)
T ss_pred CCCcC-CcccCCccceeHHHHHHHHHHHcCCCc--ceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHH
Confidence 87655 699999999999999999999986433 244445555555666789999998 99999999999999999999
Q ss_pred HhCC
Q 035631 326 KKNP 329 (684)
Q Consensus 326 ~~~~ 329 (684)
+..-
T Consensus 331 r~~i 334 (350)
T KOG1429|consen 331 RERI 334 (350)
T ss_pred HHHH
Confidence 8754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=330.09 Aligned_cols=311 Identities=24% Similarity=0.300 Sum_probs=247.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc---ccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS---SLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
.+|+||||||+||||++++++|+++ |++|++++|..... ....+.. .....+++++.+|+.|.+.+..++...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 4578999999999999999999999 89999998864211 1111110 011245889999999999999988766
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-----EEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-----RFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-----~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++|+|||+|+.........++...+++|+.++.+++++|++.+ ++ +||++||.++||.... +.+|+.+..
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~----~~~E~~~~~ 157 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPP----PQSETTPFH 157 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCC----CCCCCCCCC
Confidence 7999999999866554556777888999999999999999876 43 8999999999997653 346778888
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCceEE-ecCCCceEecccHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE---KLIPKFILLAMKGQQLPI-HGNGSNVRSYLYCAD 236 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D 236 (684)
|.+.|+.+|.++|.+++.++++++++++..|+.++|||+.... ..+..++..+..+++..+ .+++++.++|+|++|
T Consensus 158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D 237 (340)
T PLN02653 158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD 237 (340)
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence 9999999999999999999988899999999999999964322 234444555666665544 488899999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCC
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTP 313 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~ 313 (684)
+|++++.+++... ++.||+++++++|+.|+++.+.+.+|.+....+.+.. ..+.......+|++|+++ |||+|+++
T Consensus 238 ~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~ 316 (340)
T PLN02653 238 YVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVG 316 (340)
T ss_pred HHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCC
Confidence 9999999998754 5689999999999999999999999864222222222 123333455689999988 99999999
Q ss_pred HHHHHHHHHHHHHhCC
Q 035631 314 WEEGLKLTLEWYKKNP 329 (684)
Q Consensus 314 ~~e~i~~~i~~~~~~~ 329 (684)
++++|+++++|+++..
T Consensus 317 l~~gi~~~~~~~~~~~ 332 (340)
T PLN02653 317 FEQLVKMMVDEDLELA 332 (340)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987543
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=329.87 Aligned_cols=313 Identities=25% Similarity=0.382 Sum_probs=248.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|+||||||+||||+++++.|+++ |++|++++|+...... .........+++++.+|+.|.+.+..++...++|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPN-LFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchh-HHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 35689999999999999999999999 8999999986532110 00000112357788999999999999987668999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|||+|+......+..++...+++|+.++.+++++|+..+.+++||++||..+||..... .+.+|..+..|.++|+.+|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~--~~~~e~~~~~p~~~Y~~sK 156 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWV--WGYRETDPLGGHDPYSSSK 156 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCC--CCCccCCCCCCCCcchhHH
Confidence 99999976655566788899999999999999999886546899999999999865321 2345667778889999999
Q ss_pred HHHHHHHHHHHHhc-------CCCEEEEeeCceeCCCCC-CCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSY-------GLPTITTRGNNVYGPNQF-PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 170 ~~~E~~~~~~~~~~-------~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
.++|.+++.+++++ +++++++||+++|||+.. ..++++.+++.+..++++.+ +++++.++|+|++|+|+++
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~ 235 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGY 235 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHH
Confidence 99999999887654 899999999999999753 34678899998888887776 6788999999999999999
Q ss_pred HHHHhcC-----CCCcEEEecCC--CccCHHHHHHHHHHHhCCCCCcceeec--cCCCCCCcceecCHHHHHh-cCCccc
Q 035631 242 DVILHRG-----VIGHVYNVGTK--KERSVLDVAADICTLFKLEPEKTIHYV--QDRPFNDHRYFLDDQKLKR-LGWKEK 311 (684)
Q Consensus 242 ~~~~~~~-----~~~~~~ni~~~--~~~t~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~-lg~~p~ 311 (684)
+.++++. ..+++|||+++ ++.++.|+++.+.+.++... ..+... +..+.......+|++|+++ |||+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~ 314 (349)
T TIGR02622 236 LLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDD-AEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPR 314 (349)
T ss_pred HHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCC-CceeeccCCCCCcccceeecCHHHHHHHhCCCCC
Confidence 9887642 23579999975 78999999999998776321 112221 1222233446789999988 999999
Q ss_pred CCHHHHHHHHHHHHHhCC
Q 035631 312 TPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 312 ~~~~e~i~~~i~~~~~~~ 329 (684)
++++++|+++++|+++..
T Consensus 315 ~~l~~gi~~~i~w~~~~~ 332 (349)
T TIGR02622 315 WGLEEAVSRTVDWYKAWL 332 (349)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999998775
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=325.22 Aligned_cols=305 Identities=24% Similarity=0.320 Sum_probs=239.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.+|+|||||||||||+++++.|+++ |++|++++|.... .+.. .....+++.+|+.|.+.+..++ .++|+|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~----~~~~--~~~~~~~~~~Dl~d~~~~~~~~--~~~D~V 89 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNE----HMSE--DMFCHEFHLVDLRVMENCLKVT--KGVDHV 89 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEecccc----cccc--ccccceEEECCCCCHHHHHHHH--hCCCEE
Confidence 3589999999999999999999999 8999999985321 0111 0113578889999998888877 689999
Q ss_pred EEcCccCCcC-CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC-CCCCCCC--CCCCCCChhH
Q 035631 91 MHFAAQTHVD-NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES-DIGNPEA--SQLLPTNPYS 166 (684)
Q Consensus 91 ih~a~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~-~~~~~e~--~~~~p~~~Y~ 166 (684)
||+|+..... ....++...+..|+.++.+|+++|++.+ +++|||+||.++||...... ..+..|+ .+..|.+.|+
T Consensus 90 ih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg 168 (370)
T PLN02695 90 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 168 (370)
T ss_pred EEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHH
Confidence 9999865321 1223445567899999999999999987 89999999999999754321 1122333 3678889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHc-CCceEEecCCCceEecccHHHHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMK-GQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
.+|.++|+.++.+.++++++++++||+++|||+... ..+.+.++..+.. +.++.+++++++.++|+|++|+++++
T Consensus 169 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai 248 (370)
T PLN02695 169 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV 248 (370)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHH
Confidence 999999999999988889999999999999996532 1245566665554 57788889999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHH
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKL 320 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~ 320 (684)
..++++.. +++||+++++.+|++|+++.+.+..|.+.+ +...+.. .......+|++|+++ |||+|+++++++|++
T Consensus 249 ~~~~~~~~-~~~~nv~~~~~~s~~el~~~i~~~~g~~~~--i~~~~~~-~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~ 324 (370)
T PLN02695 249 LRLTKSDF-REPVNIGSDEMVSMNEMAEIALSFENKKLP--IKHIPGP-EGVRGRNSDNTLIKEKLGWAPTMRLKDGLRI 324 (370)
T ss_pred HHHHhccC-CCceEecCCCceeHHHHHHHHHHHhCCCCC--ceecCCC-CCccccccCHHHHHHhcCCCCCCCHHHHHHH
Confidence 99887653 579999999999999999999999886543 2222211 112234589999998 999999999999999
Q ss_pred HHHHHHhCCC
Q 035631 321 TLEWYKKNPH 330 (684)
Q Consensus 321 ~i~~~~~~~~ 330 (684)
+++|+++...
T Consensus 325 ~~~~~~~~~~ 334 (370)
T PLN02695 325 TYFWIKEQIE 334 (370)
T ss_pred HHHHHHHHHH
Confidence 9999987664
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=303.35 Aligned_cols=272 Identities=18% Similarity=0.172 Sum_probs=217.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
|+||||||+||||+|.+.+|++.|++| .++.+|+.|.+.++++|+..+||.|||+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~-- 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI-- 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc--
Confidence 699999999999999999999999976 67899999999999999999999999999987
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
.+..+.++|..+++.|+.||.+||++|++.+++ +||-||+.|||.+...| ++|+.+.. |.++||+||++.|
T Consensus 79 -~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P------I~E~~~~~-p~NPYG~sKlm~E 150 (329)
T COG1087 79 -SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP------ISETSPLA-PINPYGRSKLMSE 150 (329)
T ss_pred -ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc------cCCCCCCC-CCCcchhHHHHHH
Confidence 567788999999999999999999999999985 88888888999777767 99999999 9999999999999
Q ss_pred hhhhHHhhhhhhhhhhhhhhhHHH----------------HHHhhhhhh-ccccccceec------CCCCCchHHHHhhh
Q 035631 512 FLSYLEIFVLVICIECLINFQVEG----------------LLKAYENVC-TLRLRMPISS------DLSNPRNFVTKLAR 568 (684)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~g------~~~~~~~~~~~~~~ 568 (684)
++........++....+++|.+-| +.+.+.... .++..+.++| ||...|||
T Consensus 151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY------ 224 (329)
T COG1087 151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY------ 224 (329)
T ss_pred HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee------
Confidence 996555444444444444443211 233333332 2333367776 45567888
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPR 644 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 644 (684)
|||.|+|++++.+++.- .+.+||+++|+..|..|+++.+.++.|.+++..-.+ .....|.
T Consensus 225 -----------IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~-----RR~GDpa 288 (329)
T COG1087 225 -----------IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAP-----RRAGDPA 288 (329)
T ss_pred -----------eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCC-----CCCCCCc
Confidence 99999999999998743 345999999999999999999999999765554322 2223344
Q ss_pred CCCcCCchhh--hhcCCCch-hHHHHHHHHHhhcc
Q 035631 645 SNNHMDVTKL--KKEFPEVL-SIKDSIIKYVLEPN 676 (684)
Q Consensus 645 ~~~~~d~~kl--~~~~~~~~-~~~~~l~~~~~~~~ 676 (684)
..+.|++|+ .++|.+.. ++++.+++.-.+-.
T Consensus 289 -~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 289 -ILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred -eeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 667799999 66787655 88888887766554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=351.80 Aligned_cols=309 Identities=24% Similarity=0.352 Sum_probs=245.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH-HHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL-MNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~d 88 (684)
..+|+|||||||||||++|+++|++++ |++|++++|.... ...+ ...++++++.+|+.|... +.+++ .++|
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~--~~~~---~~~~~~~~~~gDl~d~~~~l~~~l--~~~D 384 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDA--ISRF---LGHPRFHFVEGDISIHSEWIEYHI--KKCD 384 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchh--hhhh---cCCCceEEEeccccCcHHHHHHHh--cCCC
Confidence 346899999999999999999999853 6999999986421 1111 112468999999998655 56666 5899
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC------C-CC
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ------L-LP 161 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~------~-~p 161 (684)
+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++||.....+ .+|+++ . .|
T Consensus 385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~---~~E~~~~~~~~p~~~p 459 (660)
T PRK08125 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKY---FDEDTSNLIVGPINKQ 459 (660)
T ss_pred EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCC---cCccccccccCCCCCC
Confidence 9999999876555566788899999999999999999976 7999999999999653322 244432 1 35
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--------CCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF--------PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+.|+.+|.++|.+++.+++.++++++++||+++|||++. ...+++.++..+..++++.+++++.+.++|+|
T Consensus 460 ~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~ 539 (660)
T PRK08125 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTD 539 (660)
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceee
Confidence 5689999999999999998888999999999999999753 13567888888888888888889999999999
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEecCCC-ccCHHHHHHHHHHHhCCCCCcceeeccC--------------CCCCCcc
Q 035631 234 CADVAEAFDVILHRGV---IGHVYNVGTKK-ERSVLDVAADICTLFKLEPEKTIHYVQD--------------RPFNDHR 295 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~---~~~~~ni~~~~-~~t~~e~~~~i~~~~g~~~~~~~~~~~~--------------~~~~~~~ 295 (684)
++|++++++.++++.. .+++||+++++ .+|++|+++.+.+.+|..+.. +..... .......
T Consensus 540 v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (660)
T PRK08125 540 IRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLR-DHFPPFAGFRVVESSSYYGKGYQDVEH 618 (660)
T ss_pred HHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccc-ccCCccccccccccccccccccccccc
Confidence 9999999999998642 36799999985 799999999999999853211 111100 0011223
Q ss_pred eecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCCCcc
Q 035631 296 YFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 296 ~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~ 332 (684)
..+|++|+++ |||+|+++++++|+++++|++++.++-
T Consensus 619 ~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~~ 656 (660)
T PRK08125 619 RKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDLT 656 (660)
T ss_pred cCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccccc
Confidence 4579999988 999999999999999999999887653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=316.68 Aligned_cols=281 Identities=21% Similarity=0.219 Sum_probs=228.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
||||||||+||||++|++.|+++ | +|++++|.. ..+.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~-----------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHS-----------------TDYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEecccc-----------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999998 6 689998842 123689999999999886668999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
||+......++.++...+.+|+.++.+|+++|++.+ .+|||+||..|||..... +.+|+++..|.+.|+.+|.++
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~---p~~E~~~~~P~~~Yg~sK~~~ 135 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDI---PWQETDATAPLNVYGETKLAG 135 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCC---CcCCCCCCCCCCHHHHHHHHH
Confidence 999988777777888889999999999999999987 489999999999876432 347788889999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC--CCceEecccHHHHHHHHHHHHhcCCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN--GSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
|+.++.++ .+++++|++++|||+. .++++.+++.+..++++.++++ +...+.+.+++|++.++..++.....
T Consensus 136 E~~~~~~~----~~~~ilR~~~vyGp~~--~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~ 209 (299)
T PRK09987 136 EKALQEHC----AKHLIFRTSWVYAGKG--NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV 209 (299)
T ss_pred HHHHHHhC----CCEEEEecceecCCCC--CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC
Confidence 99997764 3579999999999975 4678888888888888888887 55556667778888888887765444
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHh---CCCCC-cceeecc-----CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHH
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLF---KLEPE-KTIHYVQ-----DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKL 320 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~---g~~~~-~~~~~~~-----~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~ 320 (684)
.++||+++++.+|+.|+++.+.+.+ |.+.+ ..+...+ ..........+|++|+++ +||+|. +|+++|++
T Consensus 210 ~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~ 288 (299)
T PRK09987 210 AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKR 288 (299)
T ss_pred CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHH
Confidence 5799999999999999999998764 33321 0111111 122234456799999998 999985 99999999
Q ss_pred HHHHH
Q 035631 321 TLEWY 325 (684)
Q Consensus 321 ~i~~~ 325 (684)
+++.+
T Consensus 289 ~~~~~ 293 (299)
T PRK09987 289 MLTEL 293 (299)
T ss_pred HHHHH
Confidence 99765
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=318.65 Aligned_cols=305 Identities=19% Similarity=0.220 Sum_probs=229.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
...++|+||||||+||||+++++.|+++ |++|++++|+........+... .....++++.+|+.|.+.+.+++ .+
T Consensus 6 ~~~~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~ 81 (342)
T PLN02214 6 ASPAGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI--DG 81 (342)
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH--hc
Confidence 3446689999999999999999999999 8999999986431110000000 11235788999999999999988 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCc-ccccCCCCCCCCCCCCCC------CC
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTD-EVYGETDMESDIGNPEAS------QL 159 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~e~~------~~ 159 (684)
+|+|||+|+... .++...++.|+.++.+++++|++.+ +++|||+||. ++||.....+....+|++ +.
T Consensus 82 ~d~Vih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~ 155 (342)
T PLN02214 82 CDGVFHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK 155 (342)
T ss_pred CCEEEEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence 999999999642 4677889999999999999999987 8999999996 689754322211234442 34
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
.|.+.|+.+|.++|.+++.++++++++++++||++||||+..+. ..+..++. ...+.... . ++..++|||++|+
T Consensus 156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~~i~V~Dv 231 (342)
T PLN02214 156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAKT-Y--ANLTQAYVDVRDV 231 (342)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCccc-C--CCCCcCeeEHHHH
Confidence 57789999999999999999888899999999999999976432 22223332 33343322 2 3456899999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHH
Q 035631 238 AEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEG 317 (684)
Q Consensus 238 a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~ 317 (684)
|++++.+++++..++.||+++ ...++.|+++.+.+.++.. +.........+.......+|++|+++|||+| ++++|+
T Consensus 232 a~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p-~~lee~ 308 (342)
T PLN02214 232 ALAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY-PLPTKCKDEKNPRAKPYKFTNQKIKDLGLEF-TSTKQS 308 (342)
T ss_pred HHHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC-CCCCCCccccCCCCCccccCcHHHHHcCCcc-cCHHHH
Confidence 999999998876667999987 5789999999999998631 1111111112222334568999998899999 599999
Q ss_pred HHHHHHHHHhCC
Q 035631 318 LKLTLEWYKKNP 329 (684)
Q Consensus 318 i~~~i~~~~~~~ 329 (684)
|+++++|+++.+
T Consensus 309 i~~~~~~~~~~~ 320 (342)
T PLN02214 309 LYDTVKSLQEKG 320 (342)
T ss_pred HHHHHHHHHHcC
Confidence 999999998765
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=318.23 Aligned_cols=316 Identities=30% Similarity=0.464 Sum_probs=244.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCC--CCCCCceEEEecCCCHHHHHHhhcc
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPS--RASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
++++++|||||||||||++++++|+++ |++|++++|...... ...+... ....+++++.+|+.|.+.+..++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 345689999999999999999999999 899999987532111 0011110 1124688999999999999988866
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCCh
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP 164 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 164 (684)
.++|+|||+|+.........++...++.|+.++.+++++|++.+ +++||++||+++||..... +.+|+.+..|.+.
T Consensus 80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~---~~~E~~~~~~~~~ 155 (352)
T PLN02240 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEV---PCTEEFPLSATNP 155 (352)
T ss_pred CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCC---CCCCCCCCCCCCH
Confidence 68999999999765444556788899999999999999999877 8899999999999865332 3467788888999
Q ss_pred hHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHcCC--ceEEec------CC
Q 035631 165 YSATKAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQF----------PEKLIPKFILLAMKGQ--QLPIHG------NG 225 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~~~--~~~~~~------~~ 225 (684)
|+.+|.++|.+++.+... .+++++++|++++||+... +..+++ ++..+..++ .+.+++ ++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g 234 (352)
T PLN02240 156 YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYPTKDG 234 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCCCCceEEeCCCCCCCCC
Confidence 999999999999988654 5789999999999997421 112333 334444333 445554 67
Q ss_pred CceEecccHHHHHHHHHHHHhcC-----CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCH
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG-----VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~-----~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~ 300 (684)
.+.++|+|++|+|++++.++.+. ..+++||+++++++|++|+++.+.+.+|.+.+ +...+..+.....+..|+
T Consensus 235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~ 312 (352)
T PLN02240 235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIP--LKLAPRRPGDAEEVYAST 312 (352)
T ss_pred CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCC--ceeCCCCCCChhhhhcCH
Confidence 88999999999999998888642 23479999999999999999999999987544 333333333334556899
Q ss_pred HHHHh-cCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 301 QKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 301 ~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+|+++ |||+|+++++++|+++++|+++++..+.
T Consensus 313 ~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~~~ 346 (352)
T PLN02240 313 EKAEKELGWKAKYGIDEMCRDQWNWASKNPYGYG 346 (352)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhCccccC
Confidence 99987 9999999999999999999999874433
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=315.68 Aligned_cols=286 Identities=24% Similarity=0.397 Sum_probs=229.9
Q ss_pred EEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcCc
Q 035631 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAA 95 (684)
Q Consensus 16 lItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 95 (684)
||||||||||++|++.|++. |++|+++.+. ..+|+.+.+.+..++...++|+|||||+
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 69999999999999999999 7877766432 1589999999999987778999999999
Q ss_pred cCCc-CCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC----CCCCCC-hhHHHH
Q 035631 96 QTHV-DNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS----QLLPTN-PYSATK 169 (684)
Q Consensus 96 ~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~-~Y~~sK 169 (684)
.... .....++...++.|+.++.+|+++|++.+ +++|||+||+.|||.....+ .+|++ +..|.+ .|+.+|
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~---~~E~~~~~~~~~p~~~~Y~~sK 134 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQP---IPETALLTGPPEPTNEWYAIAK 134 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCC---CCHHHhccCCCCCCcchHHHHH
Confidence 7542 22345677889999999999999999987 89999999999999654332 34543 445544 599999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHH----HHHcCCceEE-ecCCCceEecccHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFIL----LAMKGQQLPI-HGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~ 240 (684)
.++|+.++.+.+.++++++++||+.+||++... ..+++.++. ....+.++.+ ++++.+.++|+|++|++++
T Consensus 135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~ 214 (306)
T PLN02725 135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA 214 (306)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence 999999999988889999999999999997531 234455443 3345666655 6788889999999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHH
Q 035631 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKL 320 (684)
Q Consensus 241 i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~ 320 (684)
++.++++....+.||+++++++|+.|+++.+.+.++.+.. +.+.+..+.......+|++|++++||+|+++++++|++
T Consensus 215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~ 292 (306)
T PLN02725 215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGE--LVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQE 292 (306)
T ss_pred HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCc--eeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHH
Confidence 9999987655678999999999999999999999986543 33322223223345689999988999999999999999
Q ss_pred HHHHHHhCC
Q 035631 321 TLEWYKKNP 329 (684)
Q Consensus 321 ~i~~~~~~~ 329 (684)
+++|++++.
T Consensus 293 ~~~~~~~~~ 301 (306)
T PLN02725 293 TYKWYLENY 301 (306)
T ss_pred HHHHHHhhh
Confidence 999999876
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=310.76 Aligned_cols=306 Identities=22% Similarity=0.223 Sum_probs=230.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCC-CCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHP-SRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+|+||||||+||||+++++.|+++ |++|++++|+..... ...+.. .....+++++.+|+.|.+.+.+++ .++|+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 80 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCET 80 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCCE
Confidence 479999999999999999999999 899998887642111 100100 111246889999999999999888 57999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC--CCCCCCCCCCCCCC------
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM--ESDIGNPEASQLLP------ 161 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~~e~~~~~p------ 161 (684)
|||+|+.........++...+++|+.++.+++++|.+...+++||++||..+|+.... ......+|+.+..|
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~ 160 (325)
T PLN02989 81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEER 160 (325)
T ss_pred EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccc
Confidence 9999997654444455678889999999999999988533689999999988764321 11123355555544
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
.+.|+.+|.++|..++.+.++++++++++||+++|||+..+. .++..++..+..++... + .+.++|+|++|+|++
T Consensus 161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a 236 (325)
T PLN02989 161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALA 236 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHH
Confidence 368999999999999999888899999999999999986543 35555555555555332 2 345799999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC--CCCCCcceecCHHHHHhcCCcccCCHHHHH
Q 035631 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQKLKRLGWKEKTPWEEGL 318 (684)
Q Consensus 241 i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i 318 (684)
++.+++++..++.||++ ++.+|+.|+++.+.+.++... +...+. .......+..|++|+++|||.|+++++++|
T Consensus 237 ~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi 312 (325)
T PLN02989 237 HVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC---IADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSL 312 (325)
T ss_pred HHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC---CCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHH
Confidence 99999876556799995 568999999999999987321 111110 111113457889999899999999999999
Q ss_pred HHHHHHHHhCC
Q 035631 319 KLTLEWYKKNP 329 (684)
Q Consensus 319 ~~~i~~~~~~~ 329 (684)
+++++|++..+
T Consensus 313 ~~~~~~~~~~~ 323 (325)
T PLN02989 313 RDTVLSLKEKC 323 (325)
T ss_pred HHHHHHHHHhC
Confidence 99999997643
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=311.97 Aligned_cols=309 Identities=28% Similarity=0.447 Sum_probs=236.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|||||||||||||+++++.|+++ |++|++++|....... ..+. .....++.++.+|+.|.+.+..++...++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHH-HhcCCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence 58999999999999999999999 8999998764321110 0010 01123567889999999999888865689999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC-CCCChhHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATK 169 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~-~p~~~Y~~sK 169 (684)
||+|+.........++...++.|+.++.+++++|++.+ +++||++||.++||..... +.+|+++. .|.+.|+.+|
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~---~~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKI---PYVESFPTGTPQSPYGKSK 153 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCC---ccccccCCCCCCChhHHHH
Confidence 99999765433445667889999999999999999987 8999999999999864332 23566665 6789999999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCC------C----CCChHHHHHHHHHcC-CceEEec------CCCceEec
Q 035631 170 AGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQ------F----PEKLIPKFILLAMKG-QQLPIHG------NGSNVRSY 231 (684)
Q Consensus 170 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~ 231 (684)
.++|++++.+++.. +++++++|++.+||+.. . +.++++.+....... ..+.+++ ++.+.++|
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence 99999999987654 78999999999999731 1 122344433333322 2344444 56788999
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LG 307 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg 307 (684)
+|++|+|++++.+++.. ..+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.........++|++|+++ +|
T Consensus 234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg 311 (338)
T PRK10675 234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_pred EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCC--eeeCCCCCCchhhhhcCHHHHHHHhC
Confidence 99999999999998752 23479999999999999999999999997543 33333333333456789999987 99
Q ss_pred CcccCCHHHHHHHHHHHHHhCCC
Q 035631 308 WKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 308 ~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
|+|+++++++|+++++|+++++.
T Consensus 312 ~~p~~~~~~~~~~~~~~~~~~~~ 334 (338)
T PRK10675 312 WRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_pred CCCcCcHHHHHHHHHHHHHhhhh
Confidence 99999999999999999988754
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=311.01 Aligned_cols=308 Identities=19% Similarity=0.271 Sum_probs=225.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
++++||||||+||||++|+++|+++ |++|+++.|...... ...+......++++++.+|+.|.+.+.+++ .++|+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~ 83 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI--AGCDL 83 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH--hcCCE
Confidence 4689999999999999999999999 899988887642111 000111111135889999999999998888 68999
Q ss_pred EEEcCccCCcCCCCCChH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCC-CCCCCCCC---------CC
Q 035631 90 IMHFAAQTHVDNSFGNSF-EFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME-SDIGNPEA---------SQ 158 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~e~---------~~ 158 (684)
|||+|+.... ...++. ..+++|+.++.+++++|.+.+.+++|||+||.++||..... ...+.+|. .+
T Consensus 84 vih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~ 161 (338)
T PLN00198 84 VFHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE 161 (338)
T ss_pred EEEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc
Confidence 9999996432 223343 46799999999999999886448999999999999853210 00111221 23
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEec-CCC----ceEec
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHG-NGS----NVRSY 231 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~ 231 (684)
..|.++|+.+|.++|.+++.++++++++++++||++||||+... ...+. ++..+..++.+.+.+ ++. ..++|
T Consensus 162 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 240 (338)
T PLN00198 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISI 240 (338)
T ss_pred CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcce
Confidence 45778899999999999999998889999999999999997532 12332 233455565555544 222 23799
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCccc
Q 035631 232 LYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEK 311 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~ 311 (684)
+|++|+|++++.+++.+..++.| ++++...++.|+++.+.+.++... ....+.. .+ ......+|.+|++++||+|+
T Consensus 241 i~V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~k~~~~G~~p~ 316 (338)
T PLN00198 241 THVEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQ-VPTDFGD-FP-SKAKLIISSEKLISEGFSFE 316 (338)
T ss_pred eEHHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCC-CCccccc-cC-CCCccccChHHHHhCCceec
Confidence 99999999999999876555678 455678999999999999876311 1111111 11 12345689999998999999
Q ss_pred CCHHHHHHHHHHHHHhCC
Q 035631 312 TPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 312 ~~~~e~i~~~i~~~~~~~ 329 (684)
++++++|+++++|++++.
T Consensus 317 ~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 317 YGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred CcHHHHHHHHHHHHHHcC
Confidence 999999999999999765
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=305.85 Aligned_cols=285 Identities=66% Similarity=1.101 Sum_probs=222.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTN 449 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~n 449 (684)
+.||||||||+||||++|+++|+++|++|....+|+.|.+.+...+...+||+||||||..+.++.+++..++..++++|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~N 87 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRAN 87 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHH
Confidence 45799999999999999999999999999877889999999988888888999999999875444456778899999999
Q ss_pred hhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhh
Q 035631 450 VMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLI 529 (684)
Q Consensus 450 v~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~ 529 (684)
+.++.+|+++|++.+++++++||++||+.....|.++..+++|++++..|.+.||.+|+++|.++..... ..+.|++
T Consensus 88 v~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~---~~~lr~~ 164 (298)
T PLN02778 88 VVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN---VCTLRVR 164 (298)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc---cEEeeec
Confidence 9999999999999999999999999998654333222334788887764568999999999987543221 1122222
Q ss_pred hhhHHHHHHhhhhhhccccccceecCC-CCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCc
Q 035631 530 NFQVEGLLKAYENVCTLRLRMPISSDL-SNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGV 608 (684)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~ 608 (684)
+. .+.+ ....+|+..++.+......+.+++|++|++++++.++++...|+||+++++.
T Consensus 165 --------------------~~-~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~~g~yNigs~~~ 223 (298)
T PLN02778 165 --------------------MP-ISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGV 223 (298)
T ss_pred --------------------cc-CCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCCCCeEEeCCCCc
Confidence 10 1111 1123566666666555555567899999999999999866668999999999
Q ss_pred ccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhhhhcCCC-chhHHHHHHHHHhhcccc
Q 035631 609 ISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPE-VLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 609 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~~~~~~-~~~~~~~l~~~~~~~~~~ 678 (684)
+|++|+++.+++.+|....+..+...+.....+.+++++.+|++|++..|+. .+..+++++.+++.|+..
T Consensus 224 iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
T PLN02778 224 VSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNKKT 294 (298)
T ss_pred ccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHHHhh
Confidence 9999999999999997655555555544455666777889999999888875 788899999999988543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=307.35 Aligned_cols=291 Identities=21% Similarity=0.229 Sum_probs=216.0
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH---HH-HHHhhcc---CCC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA---DL-MNYLLVS---EGI 87 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~---~~-~~~~~~~---~~~ 87 (684)
|||||||||||++|+++|+++ |++++++.|+...... ......+|+.|. +. +..++.. .++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTK----------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchH----------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 899999999999999999999 7876666554211100 011233455443 22 2233211 279
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+|+..... . .++...++.|+.++.+|+++|++.+ + +|||+||.++||..... ..+|..+..|.+.|+.
T Consensus 70 d~Vih~A~~~~~~-~-~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~---~~~E~~~~~p~~~Y~~ 142 (308)
T PRK11150 70 EAIFHEGACSSTT-E-WDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDD---FIEEREYEKPLNVYGY 142 (308)
T ss_pred cEEEECceecCCc-C-CChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCC---CCccCCCCCCCCHHHH
Confidence 9999999965432 2 2455678999999999999999987 5 79999999999975432 2356677888899999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC----hHHHHHHHHHcCCceEEe-cCCCceEecccHHHHHHHHH
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~i~ 242 (684)
+|.++|+.++.++.+++++++++||+++||++..+.. +...+...+.++....++ ++++..++|+|++|+|+++.
T Consensus 143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~ 222 (308)
T PRK11150 143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNL 222 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHH
Confidence 9999999999998888999999999999999764322 334455666777655454 55677899999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCC--CCcceecCHHHHHhcCCccc-CCHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF--NDHRYFLDDQKLKRLGWKEK-TPWEEGLK 319 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~d~~k~~~lg~~p~-~~~~e~i~ 319 (684)
.+++... +++||+++++.+|+.|+++.+.+.+|... ......+.... .......|++|++++||+|+ .+++++|+
T Consensus 223 ~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~ 300 (308)
T PRK11150 223 WFWENGV-SGIFNCGTGRAESFQAVADAVLAYHKKGE-IEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVA 300 (308)
T ss_pred HHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhCCCc-ceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHHH
Confidence 9988654 56999999999999999999999998421 11111111100 11234689999999999987 59999999
Q ss_pred HHHHHHH
Q 035631 320 LTLEWYK 326 (684)
Q Consensus 320 ~~i~~~~ 326 (684)
++++|+.
T Consensus 301 ~~~~~~~ 307 (308)
T PRK11150 301 EYMAWLN 307 (308)
T ss_pred HHHHHhh
Confidence 9999974
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=286.11 Aligned_cols=308 Identities=24% Similarity=0.249 Sum_probs=231.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc-cCCCC-CCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK-NLHPS-RASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
++++|+|||||||||+++++.||++ ||.|++..|++...+.. -+... ...++++.+.+||.|.+++..++ .++|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--DGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--hCCC
Confidence 5689999999999999999999999 99999999986432211 12222 23456999999999999999999 8999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCC--CCCCCCCCCCCCCCC------
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGET--DMESDIGNPEASQLL------ 160 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~--~~~~~~~~~e~~~~~------ 160 (684)
+|||+|.+..++... ...+..+..+.|++|++++|++...++|+|++||+++-..+ ........+|.....
T Consensus 81 gVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~ 159 (327)
T KOG1502|consen 81 GVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC 159 (327)
T ss_pred EEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence 999999998765433 34478999999999999999998889999999997765433 222222233432211
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
-...|..+|..+|+.+++++++.+++.+.+.|+.|+||...+. +.....+....+|..-.. . .....|+|++|+|.
T Consensus 160 ~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~-~--n~~~~~VdVrDVA~ 236 (327)
T KOG1502|consen 160 KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY-P--NFWLAFVDVRDVAL 236 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC-C--CCceeeEeHHHHHH
Confidence 2257999999999999999999999999999999999987653 222333444445532222 1 23345999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CCCCcceecCHHHHHhcCCcccCCHHHHH
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PFNDHRYFLDDQKLKRLGWKEKTPWEEGL 318 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~lg~~p~~~~~e~i 318 (684)
+.+.+++++...+.|.+.+.. .++.|+++.+.+.+..-+ . ....+.. ........++++|+++||+...++++|++
T Consensus 237 AHv~a~E~~~a~GRyic~~~~-~~~~ei~~~l~~~~P~~~-i-p~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~ 313 (327)
T KOG1502|consen 237 AHVLALEKPSAKGRYICVGEV-VSIKEIADILRELFPDYP-I-PKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETL 313 (327)
T ss_pred HHHHHHcCcccCceEEEecCc-ccHHHHHHHHHHhCCCCC-C-CCCCCccccccccccccccHHHHhcccceecChHHHH
Confidence 999999999988999999654 559999999999986533 1 1111111 11112235899999998855556999999
Q ss_pred HHHHHHHHhCC
Q 035631 319 KLTLEWYKKNP 329 (684)
Q Consensus 319 ~~~i~~~~~~~ 329 (684)
.++++++++..
T Consensus 314 ~dt~~sl~~~~ 324 (327)
T KOG1502|consen 314 SDTVESLREKG 324 (327)
T ss_pred HHHHHHHHHhc
Confidence 99999998765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=301.68 Aligned_cols=301 Identities=37% Similarity=0.569 Sum_probs=244.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC-CEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI-DTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~-d~Vi 91 (684)
|+|||||||||||++|+++|+++ |++|++++|....... . ..+++.+.+|+.+.+...... ... |+||
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~--~-----~~~~~~~~~d~~~~~~~~~~~--~~~~d~vi 69 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDP--L-----LSGVEFVVLDLTDRDLVDELA--KGVPDAVI 69 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccc--c-----ccccceeeecccchHHHHHHH--hcCCCEEE
Confidence 35999999999999999999999 8999999996421111 0 046788999999988777777 444 9999
Q ss_pred EcCccCCcCCCCC-ChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC-CCCCCCChhHHHH
Q 035631 92 HFAAQTHVDNSFG-NSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-SQLLPTNPYSATK 169 (684)
Q Consensus 92 h~a~~~~~~~~~~-~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~-~~~~p~~~Y~~sK 169 (684)
|+|+......... ++...+..|+.++.+++++|++.+ +++|||.||..+|+..... ...+|+ .+..|.++|+.+|
T Consensus 70 h~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~--~~~~E~~~~~~p~~~Yg~sK 146 (314)
T COG0451 70 HLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPP--LPIDEDLGPPRPLNPYGVSK 146 (314)
T ss_pred EccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCC--CCcccccCCCCCCCHHHHHH
Confidence 9999876544433 466789999999999999999966 9999999998888765221 133555 6778888999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCc-eEEecCCCceEecccHHHHHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE---KLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
.++|..++.+...++++++++||++||||+..+. .++..++.....+.+ +...+++...++++|++|+++++..++
T Consensus 147 ~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 226 (314)
T COG0451 147 LAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226 (314)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence 9999999999887799999999999999987665 566666666777776 666678888899999999999999999
Q ss_pred hcCCCCcEEEecCCC-ccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHH
Q 035631 246 HRGVIGHVYNVGTKK-ERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT 321 (684)
Q Consensus 246 ~~~~~~~~~ni~~~~-~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~ 321 (684)
+++..+ .||+++++ ..++.|+++.+.+.+|..... +...+ ..........+|..|++. |||.|.+++++++.++
T Consensus 227 ~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~ 304 (314)
T COG0451 227 ENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPL-IVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADT 304 (314)
T ss_pred hCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcc-eeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 987767 99999997 899999999999999987553 22222 233344556789999986 9999999999999999
Q ss_pred HHHHHhCC
Q 035631 322 LEWYKKNP 329 (684)
Q Consensus 322 i~~~~~~~ 329 (684)
++|+....
T Consensus 305 ~~~~~~~~ 312 (314)
T COG0451 305 LEWLLKKL 312 (314)
T ss_pred HHHHHHhh
Confidence 99987654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=304.70 Aligned_cols=304 Identities=21% Similarity=0.248 Sum_probs=226.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCC-CCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPS-RASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|||||||||||++++++|+++ |++|++++|+..... ...+... ...++++++.+|+.|.+.+..++ .++|+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 79 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV--DGCEG 79 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--cCCCE
Confidence 478999999999999999999999 899999988642211 1111100 11246889999999999999988 68999
Q ss_pred EEEcCccCCcCCCCCChH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc--cccCCCCCCCCCCCCCCCCCC-----
Q 035631 90 IMHFAAQTHVDNSFGNSF-EFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE--VYGETDMESDIGNPEASQLLP----- 161 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~--vyg~~~~~~~~~~~e~~~~~p----- 161 (684)
|||+|+.... ...++. ..+++|+.++.+++++|++...+++|||+||.+ +|+..........+|+.+..|
T Consensus 80 Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~ 157 (322)
T PLN02662 80 VFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE 157 (322)
T ss_pred EEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhc
Confidence 9999997542 223444 788999999999999999872389999999986 465332111112345544444
Q ss_pred -CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 162 -TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 162 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
.+.|+.+|.++|+.++.+.++++++++++||+++|||...+. .....++..+..+++. .+.+.++|+|++|+|+
T Consensus 158 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~ 233 (322)
T PLN02662 158 SKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT----FPNASYRWVDVRDVAN 233 (322)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHH
Confidence 358999999999999999888899999999999999975432 3444445555544431 1245689999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHH
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLK 319 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~ 319 (684)
+++.+++.+..++.||++ ++.+++.|+++.+.+.++... ......+..+ ......+|++|+++|||++ ++++++|+
T Consensus 234 a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~-~~~~~~~d~~k~~~lg~~~-~~~~~~l~ 309 (322)
T PLN02662 234 AHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQ-LPEKCADDKP-YVPTYQVSKEKAKSLGIEF-IPLEVSLK 309 (322)
T ss_pred HHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCC-CCCCCCCccc-cccccccChHHHHHhCCcc-ccHHHHHH
Confidence 999999876555689997 578999999999999876421 1111111111 2234579999999999997 59999999
Q ss_pred HHHHHHHhCC
Q 035631 320 LTLEWYKKNP 329 (684)
Q Consensus 320 ~~i~~~~~~~ 329 (684)
++++|++++.
T Consensus 310 ~~~~~~~~~~ 319 (322)
T PLN02662 310 DTVESLKEKG 319 (322)
T ss_pred HHHHHHHHcC
Confidence 9999998776
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=283.92 Aligned_cols=312 Identities=33% Similarity=0.493 Sum_probs=254.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--cccccCCCC-CCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--SSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.++||||||.||||+|.+-+|+++ |+.|+++|...+. ......... .....+.++++|+.|.++++++|...++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 478999999999999999999999 8999999875321 111111111 12468999999999999999999999999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC-CCChhHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL-PTNPYSA 167 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~-p~~~Y~~ 167 (684)
.|+|+|+......+.++|...++.|+.++.+|++.+++.+ ++.+|+.||+.|||.+.. .+.+|.++.. |.++|+.
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~---ip~te~~~t~~p~~pyg~ 155 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTK---VPITEEDPTDQPTNPYGK 155 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcce---eeccCcCCCCCCCCcchh
Confidence 9999999999889999999999999999999999999998 999999999999998876 4457777776 9999999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeC--CC----CC----CCChHHHHHHHHHc-CCceEE------ecCCCceEe
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYG--PN----QF----PEKLIPKFILLAMK-GQQLPI------HGNGSNVRS 230 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G--~~----~~----~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~ 230 (684)
+|.+.|+++..+...++..+++||.++++| |. +. +.++.+.....+.. .....+ .-+|+..++
T Consensus 156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrd 235 (343)
T KOG1371|consen 156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRD 235 (343)
T ss_pred hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeec
Confidence 999999999999988889999999999999 32 22 22344332222221 111222 135688899
Q ss_pred cccHHHHHHHHHHHHhcCC---CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-c
Q 035631 231 YLYCADVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l 306 (684)
+||+-|+|+....++.... ..++||++.+...++.++..++.+.+|.+.+. ...+.++........+.+++++ |
T Consensus 236 yi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~--~~v~~R~gdv~~~ya~~~~a~~el 313 (343)
T KOG1371|consen 236 YIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK--KVVPRRNGDVAFVYANPSKAQREL 313 (343)
T ss_pred ceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc--cccCCCCCCceeeeeChHHHHHHh
Confidence 9999999999999997643 23599999999999999999999999988764 3334466666677788888765 9
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCCc
Q 035631 307 GWKEKTPWEEGLKLTLEWYKKNPHW 331 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~~~~~ 331 (684)
||+|.+.+++++++++.|..+++..
T Consensus 314 gwk~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 314 GWKAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred CCccccCHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999854
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=305.16 Aligned_cols=308 Identities=18% Similarity=0.238 Sum_probs=221.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCC-CCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHP-SRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+.++|||||||||||++++++|+++ |++|++++|+..... ...+.. ......++++.+|+.|.+.+.+++ .++|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~d 79 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI--RGCT 79 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--hCCC
Confidence 4579999999999999999999999 899999988642111 001100 011135788999999999999888 6899
Q ss_pred EEEEcCccCCcCCCCCCh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC---------C
Q 035631 89 TIMHFAAQTHVDNSFGNS-FEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS---------Q 158 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~---------~ 158 (684)
+|||+|+..... ..++ ...+++|+.++.+++++|++.+.+++|||+||.++|+...... ...+|.. +
T Consensus 80 ~ViH~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~-~~~~E~~~~~~~~~~~~ 156 (351)
T PLN02650 80 GVFHVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQK-PVYDEDCWSDLDFCRRK 156 (351)
T ss_pred EEEEeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCC-CccCcccCCchhhhhcc
Confidence 999999865422 2233 4688999999999999999876578999999998876432211 0012221 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHH--HcCCceEEecCCCceEecccHHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLA--MKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
..|.++|+.+|.++|.+++.++++++++++++||+++|||+.... ..+.++..+ ..++... ++. ...++|+|++|
T Consensus 157 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~D 233 (351)
T PLN02650 157 KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS-MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDD 233 (351)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC-CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHH
Confidence 234568999999999999999988999999999999999975321 112222221 2232221 222 23479999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHH
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEE 316 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e 316 (684)
+|++++.+++++..++.| +++++.+|+.|+++.+.+.++... ..... ............|++|+++|||+|++++++
T Consensus 234 va~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~~-~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e 310 (351)
T PLN02650 234 LCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYN-IPARF-PGIDEDLKSVEFSSKKLTDLGFTFKYSLED 310 (351)
T ss_pred HHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccC-CCCCC-CCcCcccccccCChHHHHHhCCCCCCCHHH
Confidence 999999999876655688 566788999999999999876321 11111 111122234467899988899999999999
Q ss_pred HHHHHHHHHHhCCCc
Q 035631 317 GLKLTLEWYKKNPHW 331 (684)
Q Consensus 317 ~i~~~i~~~~~~~~~ 331 (684)
+|+++++|+++....
T Consensus 311 gl~~~i~~~~~~~~~ 325 (351)
T PLN02650 311 MFDGAIETCREKGLI 325 (351)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999877633
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=278.08 Aligned_cols=274 Identities=27% Similarity=0.318 Sum_probs=235.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||++|++|+.|++.|. . +++|++++|. ..|+.|.+.+.+++...+||+|||
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~---------------------~~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G--EFEVIATDRA---------------------ELDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCc---------------------cccccChHHHHHHHHhhCCCEEEE
Confidence 459999999999999999998 4 7999999984 289999999999998889999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|++...+.++.+++.++.+|..++.|++++|++.| .++||+||..||+..... ++.|++++.|.+.||+||.++
T Consensus 57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~---~Y~E~D~~~P~nvYG~sKl~G 131 (281)
T COG1091 57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGG---PYKETDTPNPLNVYGRSKLAG 131 (281)
T ss_pred CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCC---CCCCCCCCCChhhhhHHHHHH
Confidence 999999999999999999999999999999999998 899999999999887753 358999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCc
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 252 (684)
|+.++.++ -+.+|+|.+|+||... .+|+..+++....++++.+..+ +..+.+++.|+|+++..++.....++
T Consensus 132 E~~v~~~~----~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~~~ 203 (281)
T COG1091 132 EEAVRAAG----PRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKEGG 203 (281)
T ss_pred HHHHHHhC----CCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhccccCc
Confidence 99998764 5579999999999865 6899999999999999988654 77789999999999999999887777
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCcc-eeec---cCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHH
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEKT-IHYV---QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEW 324 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~-~~~~---~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~ 324 (684)
+||+++....||.|+++.|.+.++.+.... .... +.....+....+|+.|+++ +|+.|. +|+++++.+++.
T Consensus 204 ~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 204 VYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred EEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 999999888999999999999998654211 1111 1111222345699999988 777774 999999998864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=299.62 Aligned_cols=276 Identities=29% Similarity=0.404 Sum_probs=210.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
||||||||+|+||++|++.|.++ +++|++++|. ..|+.|.+.+.+.+...+||+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 79999999999999999999998 8999999874 579999999999997779999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
||+...++.++.+++..+.+|+.++.+|+++|.+.+ .++||+||..||++....+ ..|++++.|.+.||.+|.++
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~---y~E~d~~~P~~~YG~~K~~~ 132 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGP---YTEDDPPNPLNVYGRSKLEG 132 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSS---B-TTS----SSHHHHHHHHH
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccc---cccCCCCCCCCHHHHHHHHH
Confidence 999998888889999999999999999999999987 7999999999998775433 47888999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC--
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI-- 250 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~-- 250 (684)
|+.+++... +++|+|++++||+.. .+++..++..+.+++.+.+..+ ..++.+|++|+|+++..++++...
T Consensus 133 E~~v~~~~~----~~~IlR~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~~ 204 (286)
T PF04321_consen 133 EQAVRAACP----NALILRTSWVYGPSG--RNFLRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSGA 204 (286)
T ss_dssp HHHHHHH-S----SEEEEEE-SEESSSS--SSHHHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH-G
T ss_pred HHHHHHhcC----CEEEEecceecccCC--CchhhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhccccc
Confidence 999987543 689999999999933 5899999999999999988654 678999999999999999987543
Q ss_pred --CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec----cCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHH
Q 035631 251 --GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV----QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLE 323 (684)
Q Consensus 251 --~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~ 323 (684)
.++||+++++.+|+.|+++.+.+.+|.+........ ......+....+|++|+++ +|+++. +|+++|+++++
T Consensus 205 ~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~ 283 (286)
T PF04321_consen 205 SPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVK 283 (286)
T ss_dssp GG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHH
T ss_pred ccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHH
Confidence 579999999999999999999999998763222211 1112234567899999999 799985 99999999998
Q ss_pred HH
Q 035631 324 WY 325 (684)
Q Consensus 324 ~~ 325 (684)
.|
T Consensus 284 ~~ 285 (286)
T PF04321_consen 284 QY 285 (286)
T ss_dssp HH
T ss_pred Hh
Confidence 65
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=299.30 Aligned_cols=303 Identities=22% Similarity=0.247 Sum_probs=223.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCC-CCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHP-SRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|||||||||||++++++|+++ |++|+++.|+.... ....+.. ......++++.+|+.|.+.+..++ .++|+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 80 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI--EGCDA 80 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH--hCCCE
Confidence 479999999999999999999999 89999888864321 1111111 111346889999999999999988 67999
Q ss_pred EEEcCccCCcCCCCCCh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccc--cCCCCCCCCCCCCCCCC------C
Q 035631 90 IMHFAAQTHVDNSFGNS-FEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVY--GETDMESDIGNPEASQL------L 160 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vy--g~~~~~~~~~~~e~~~~------~ 160 (684)
|||+|+..... ..++ ...++.|+.++.+++++|++...++|||++||.++| +..........+|+++. .
T Consensus 81 vih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~ 158 (322)
T PLN02986 81 VFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRE 158 (322)
T ss_pred EEEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhc
Confidence 99999975322 2233 356899999999999999986348999999998765 33211111123444332 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
+.+.|+.+|.++|..++.+.++++++++++||+.+|||...+. ++...++.....+++. ++ .+.++|+|++|+|+
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~ 234 (322)
T PLN02986 159 TKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVAL 234 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHH
Confidence 4578999999999999999988899999999999999975432 2334455555555542 22 45689999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec-cCCCCCCcceecCHHHHHhcCCcccCCHHHHH
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV-QDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGL 318 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i 318 (684)
+++.+++++..++.||++ ++.+|+.|+++.+.+.++.. . +... +........+.+|++|+++|||+|+ +++|+|
T Consensus 235 a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~-~--~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~-~l~e~~ 309 (322)
T PLN02986 235 AHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPDL-C--IADTNEESEMNEMICKVCVEKVKNLGVEFT-PMKSSL 309 (322)
T ss_pred HHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC-C--CCCCCccccccccCCccCHHHHHHcCCccc-CHHHHH
Confidence 999999887666799995 56899999999999998631 1 1111 1111111222489999988999997 999999
Q ss_pred HHHHHHHHhCC
Q 035631 319 KLTLEWYKKNP 329 (684)
Q Consensus 319 ~~~i~~~~~~~ 329 (684)
+++++|++..+
T Consensus 310 ~~~~~~~~~~~ 320 (322)
T PLN02986 310 RDTILSLKEKC 320 (322)
T ss_pred HHHHHHHHHcC
Confidence 99999997653
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=302.91 Aligned_cols=311 Identities=18% Similarity=0.226 Sum_probs=221.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
..|+||||||+||||++++++|+++ |++|++++|+..... ..........+++++.+|+.+.+.+.+++ .++|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSL-HLLSKWKEGDRLRLFRADLQEEGSFDEAV--KGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHH-HHHHhhccCCeEEEEECCCCCHHHHHHHH--cCCCEE
Confidence 5679999999999999999999999 899999988642111 00111111246889999999999999988 579999
Q ss_pred EEcCccCCcCC--CCCChHH-----HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCC--CCCCCCCC--CC-
Q 035631 91 MHFAAQTHVDN--SFGNSFE-----FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME--SDIGNPEA--SQ- 158 (684)
Q Consensus 91 ih~a~~~~~~~--~~~~~~~-----~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~--~~~~~~e~--~~- 158 (684)
||+|+...... ...++.. .++.|+.++.+|+++|++.+.+++||++||.++||..... ...+.+|+ .+
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~ 163 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI 163 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence 99999765432 2234443 3455679999999999887547899999999999854211 00112333 11
Q ss_pred ------CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCce--EEecC---C
Q 035631 159 ------LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQL--PIHGN---G 225 (684)
Q Consensus 159 ------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~--~~~~~---~ 225 (684)
..+.++|+.+|.++|++++.++++++++++++||++||||+.... .++..++..+ .+... ...+. .
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 242 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPI-TGDSKLFSILSAVNSR 242 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHh-cCCccccccccccccc
Confidence 124458999999999999999988899999999999999976421 2222222221 23221 11111 1
Q ss_pred CceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh
Q 035631 226 SNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR 305 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 305 (684)
...++|||++|+|++++.+++.+..++.|++ +++.+++.|+++.+.+.++.... .+...+... ......+|++++++
T Consensus 243 ~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ 319 (353)
T PLN02896 243 MGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNI-QVRLDEEKR-GSIPSEISSKKLRD 319 (353)
T ss_pred cCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCc-ccccccccc-CccccccCHHHHHH
Confidence 1246999999999999999987655567865 57789999999999999873211 112111111 11124568999988
Q ss_pred cCCcccCCHHHHHHHHHHHHHhCCC
Q 035631 306 LGWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 306 lg~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
|||+|+++++++|+++++|++.+.-
T Consensus 320 lGw~p~~~l~~~i~~~~~~~~~~~~ 344 (353)
T PLN02896 320 LGFEYKYGIEEIIDQTIDCCVDHGF 344 (353)
T ss_pred cCCCccCCHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998873
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=297.13 Aligned_cols=294 Identities=23% Similarity=0.308 Sum_probs=225.5
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--CCCCEEE
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--EGIDTIM 91 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~Vi 91 (684)
|||||||||||+++++.|+++ |+ +|++++|.........+ ....+..|+.+.+.+..+... .++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGHKFLNL-------ADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCchhhhhh-------hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 699999999999999999999 76 78888875421111100 113456788887777665421 5899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC-CCCCCChhHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS-QLLPTNPYSATKA 170 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~-~~~p~~~Y~~sK~ 170 (684)
|+|+.... ...++...+++|+.++.+++++|++.+ + +|||+||..+|+...... .|.+ +..|.+.|+.+|.
T Consensus 72 h~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~----~e~~~~~~p~~~Y~~sK~ 143 (314)
T TIGR02197 72 HQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGF----REGRELERPLNVYGYSKF 143 (314)
T ss_pred ECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCc----ccccCcCCCCCHHHHHHH
Confidence 99997542 345677889999999999999999977 4 899999999998764322 3333 3458889999999
Q ss_pred HHHHHHHHHHHh--cCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEEe------cCCCceEecccHHHHH
Q 035631 171 GAEMLVMAYHRS--YGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIH------GNGSNVRSYLYCADVA 238 (684)
Q Consensus 171 ~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a 238 (684)
.+|.+++++... .+++++++||+.+||++... ..++..++..+..+.++.++ +++++.++|+|++|++
T Consensus 144 ~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a 223 (314)
T TIGR02197 144 LFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVV 223 (314)
T ss_pred HHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHH
Confidence 999999876432 35789999999999997532 24566677777777777654 4577889999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCC--CCcceecCHHHHHh-cCCcccCCHH
Q 035631 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF--NDHRYFLDDQKLKR-LGWKEKTPWE 315 (684)
Q Consensus 239 ~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~d~~k~~~-lg~~p~~~~~ 315 (684)
+++..++.. ..+++||+++++++|+.|+++.+.+.+|.+........+.... ......+|++|+++ +||+|+++++
T Consensus 224 ~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~ 302 (314)
T TIGR02197 224 DVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLE 302 (314)
T ss_pred HHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHH
Confidence 999999987 5567999999999999999999999999754322221222111 11234689999988 8999999999
Q ss_pred HHHHHHHHHHH
Q 035631 316 EGLKLTLEWYK 326 (684)
Q Consensus 316 e~i~~~i~~~~ 326 (684)
++++++++|+.
T Consensus 303 ~~l~~~~~~~~ 313 (314)
T TIGR02197 303 EGVKDYVQWLL 313 (314)
T ss_pred HHHHHHHHHHh
Confidence 99999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=304.04 Aligned_cols=270 Identities=23% Similarity=0.331 Sum_probs=196.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeee---eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFG---TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRT 448 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~---~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 448 (684)
|||||||++||||++|.++|.++|++|... ..|++|.+.+.+++...+||+||||||.+ +++.++.+++..+++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~---~~~~ce~~p~~a~~i 77 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYT---NVDACEKNPEEAYAI 77 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE---------HHHHHHSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceee---cHHhhhhChhhhHHH
Confidence 799999999999999999999999988655 78899999999999999999999999988 789999999999999
Q ss_pred chhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhh
Q 035631 449 NVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528 (684)
Q Consensus 449 nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~ 528 (684)
|+.++.+|+++|.+.++++||+||..||++....| ++|+++++ |.+.||++|+++|+....... ...+.|+
T Consensus 78 N~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~------y~E~d~~~-P~~~YG~~K~~~E~~v~~~~~--~~~IlR~ 148 (286)
T PF04321_consen 78 NVDATKNLAEACKERGARLIHISTDYVFDGDKGGP------YTEDDPPN-PLNVYGRSKLEGEQAVRAACP--NALILRT 148 (286)
T ss_dssp HTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSS------B-TTS-----SSHHHHHHHHHHHHHHHH-S--SEEEEEE
T ss_pred hhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccc------cccCCCCC-CCCHHHHHHHHHHHHHHHhcC--CEEEEec
Confidence 99999999999999999999999999999887777 99999999 999999999999876544222 3333444
Q ss_pred hhhhHHHHHHhhhhhhccccccceecC-CCCCchHHHHhhhcccccccC-C---CccchhhHHHHHHHHHhcCcc-----
Q 035631 529 INFQVEGLLKAYENVCTLRLRMPISSD-LSNPRNFVTKLARYNKVVNIP-N---SMTVLDEMLPIAIEMARRNCR----- 598 (684)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~-~---~~i~v~D~~~~~~~~~~~~~~----- 598 (684)
. .++|. +.+...++.+.++.+..+... . +++|++|+|+++..++++...
T Consensus 149 ~---------------------~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~ 207 (286)
T PF04321_consen 149 S---------------------WVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPW 207 (286)
T ss_dssp ----------------------SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-
T ss_pred c---------------------eecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccc
Confidence 3 12333 223334444555555543332 2 999999999999999998755
Q ss_pred ceeEecCCCcccHHHHHHHHHhhcCCcc-cccCCchhHhhhhhccCCCCCcCCchhhhhcCC-CchhHHHHHHHHHhhc
Q 035631 599 GAWNFTNPGVISHNEILELYKEYIDPQL-KWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFP-EVLSIKDSIIKYVLEP 675 (684)
Q Consensus 599 g~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~kl~~~~~-~~~~~~~~l~~~~~~~ 675 (684)
|+||+++++.+|+.|+++.+++.+|... .+.+++..+......+|. +..+|++|++..++ .+++|+++|+++++++
T Consensus 208 Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~-~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 208 GIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPR-NTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-S-BE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred eeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCC-cccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999655 556666665566677888 99999999955544 8899999999998764
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=293.54 Aligned_cols=306 Identities=33% Similarity=0.496 Sum_probs=237.6
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
|||||||||+||+++++.|+++ |++|++++|..... ...+.......+++++.+|+.+.+.+..++...++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGS-PEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccc-hhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999999999999999999 88999887643211 11111111112577889999999999998866689999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 173 (684)
|+.........++...++.|+.++.+++++|.+.+ ++++|++||.++||..... ..+|+++..|.+.|+.+|..+|
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~---~~~e~~~~~~~~~y~~sK~~~e 153 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSI---PISEDSPLGPINPYGRSKLMSE 153 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCC---CccccCCCCCCCchHHHHHHHH
Confidence 99765544555677888999999999999999887 7899999999999865432 2467777778899999999999
Q ss_pred HHHHHHHHh-cCCCEEEEeeCceeCCCCC---------CCChHHHHHHHHH-cCCceEEec------CCCceEecccHHH
Q 035631 174 MLVMAYHRS-YGLPTITTRGNNVYGPNQF---------PEKLIPKFILLAM-KGQQLPIHG------NGSNVRSYLYCAD 236 (684)
Q Consensus 174 ~~~~~~~~~-~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D 236 (684)
..++.++.+ .+++++++||+.+||+... ...+++.+..... ...++.+++ +++..++|+|++|
T Consensus 154 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 154 RILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 999998776 6999999999999998531 1235555555544 334444433 4567799999999
Q ss_pred HHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccC
Q 035631 237 VAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT 312 (684)
Q Consensus 237 ~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~ 312 (684)
+++++..++... ..+++||+++++++|+.|+++.+.+.+|.+.. +...+...........|++|+++ |||+|.+
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~ 311 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFP--VELAPRRPGDPASLVADASKIRRELGWQPKY 311 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcc--eEeCCCCCccccchhcchHHHHHHhCCCCCc
Confidence 999999998752 34689999999999999999999999997653 22222222222345679999987 9999998
Q ss_pred C-HHHHHHHHHHHHHhC
Q 035631 313 P-WEEGLKLTLEWYKKN 328 (684)
Q Consensus 313 ~-~~e~i~~~i~~~~~~ 328 (684)
+ ++++++++++|+++|
T Consensus 312 ~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 312 TDLEIIIKTAWRWESRN 328 (328)
T ss_pred chHHHHHHHHHHHHhcC
Confidence 7 999999999999875
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=296.85 Aligned_cols=273 Identities=16% Similarity=0.167 Sum_probs=212.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVE 444 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 444 (684)
||||||||+||||++|+++|+++| +|. .+.+|++|.+.+.+++++.+||+|||||+.. .++.+..++..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~---~~~~~~~~~~~ 76 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHT---AVDKAESEPEF 76 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccC---CcchhhcCHHH
Confidence 699999999999999999999999 553 2347999999999999988899999999977 45556778888
Q ss_pred HhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhh
Q 035631 445 TIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVIC 524 (684)
Q Consensus 445 ~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~ 524 (684)
.+++|+.++.+|+++|++.++++||+||+.||++....| ++|++++. |.+.||.+|+.+|++..... ....
T Consensus 77 ~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p------~~E~~~~~-P~~~Yg~sK~~~E~~~~~~~--~~~~ 147 (299)
T PRK09987 77 AQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIP------WQETDATA-PLNVYGETKLAGEKALQEHC--AKHL 147 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCC------cCCCCCCC-CCCHHHHHHHHHHHHHHHhC--CCEE
Confidence 999999999999999999999999999999998765555 89999988 99999999999998754332 2446
Q ss_pred hhhhhhhhHHH---HHHhhhhhhccccccceecC--CCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-cc
Q 035631 525 IECLINFQVEG---LLKAYENVCTLRLRMPISSD--LSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CR 598 (684)
Q Consensus 525 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~ 598 (684)
+.|+.++|+++ +...+.+.+....++.++++ +.+.+.+ .++||+++++..+++.. ..
T Consensus 148 ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~ 210 (299)
T PRK09987 148 IFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAE-----------------LLADCTAHAIRVALNKPEVA 210 (299)
T ss_pred EEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHH-----------------HHHHHHHHHHHHhhccCCCC
Confidence 77777666543 23333444444455667776 5555667 77888999988887654 45
Q ss_pred ceeEecCCCcccHHHHHHHHHhhcC---Ccc---cccCCchhHhhhhhccCCCCCcCCchhhh--hcCCCchhHHHHHHH
Q 035631 599 GAWNFTNPGVISHNEILELYKEYID---PQL---KWSNFNLEEQAKVLVAPRSNNHMDVTKLK--KEFPEVLSIKDSIIK 670 (684)
Q Consensus 599 g~~ni~~~~~~s~~e~~~~i~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~kl~--~~~~~~~~~~~~l~~ 670 (684)
|+||+++++.+|+.|+++.+.+.++ .+. .+.+++....+....+|. +..+|++|++ ++|. +++|+++|++
T Consensus 211 giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~-~~~ld~~k~~~~lg~~-~~~~~~~l~~ 288 (299)
T PRK09987 211 GLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPH-NSRLNTEKFQQNFALV-LPDWQVGVKR 288 (299)
T ss_pred CeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCC-cccCCHHHHHHHhCCC-CccHHHHHHH
Confidence 8999999999999999999977643 222 122333333344455777 8899999993 4665 4699999999
Q ss_pred HHhhcc
Q 035631 671 YVLEPN 676 (684)
Q Consensus 671 ~~~~~~ 676 (684)
+++++.
T Consensus 289 ~~~~~~ 294 (299)
T PRK09987 289 MLTELF 294 (299)
T ss_pred HHHHHh
Confidence 998764
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=286.58 Aligned_cols=274 Identities=25% Similarity=0.318 Sum_probs=222.7
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
||||||||||||++++++|+++ |++|++++|+ .+|+.+.+.+..++...++|+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999999 8999999883 4799999999999976678999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 173 (684)
|+.........++...+++|+.++.+++++|++.+ .+||++||.++|+..... +.+|.++..|.+.|+.+|.++|
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~---~~~E~~~~~~~~~Y~~~K~~~E 132 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGKR---PYREDDATNPLNVYGQSKLAGE 132 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeecCCCCC---CCCCCCCCCCcchhhHHHHHHH
Confidence 99765544445677889999999999999999877 489999999999864432 3467777788899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCCc
Q 035631 174 MLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIGH 252 (684)
Q Consensus 174 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~ 252 (684)
..++.+ +++++++||+++||++.. ..++..++..+..++++.+.++ ..++++|++|+|+++..+++.+ ..++
T Consensus 133 ~~~~~~----~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~ 205 (287)
T TIGR01214 133 QAIRAA----GPNALIVRTSWLYGGGGG-RNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARG 205 (287)
T ss_pred HHHHHh----CCCeEEEEeeecccCCCC-CCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCC
Confidence 999765 679999999999999742 3567777777777777776554 5689999999999999999876 4678
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCcc----eeec-----cCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHH
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEKT----IHYV-----QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTL 322 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~----~~~~-----~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i 322 (684)
+||+++++.+|+.|+++.+.+.+|...... +... +..........+|++|+++ |||. .++++++|.+++
T Consensus 206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~-~~~~~~~l~~~~ 284 (287)
T TIGR01214 206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTP-LPHWREALRAYL 284 (287)
T ss_pred eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCC-CccHHHHHHHHH
Confidence 999999999999999999999998754210 1110 1111112345799999998 8994 469999999887
Q ss_pred H
Q 035631 323 E 323 (684)
Q Consensus 323 ~ 323 (684)
+
T Consensus 285 ~ 285 (287)
T TIGR01214 285 Q 285 (287)
T ss_pred h
Confidence 5
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=276.38 Aligned_cols=267 Identities=22% Similarity=0.248 Sum_probs=217.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee---eeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF---GTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRT 448 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~---~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 448 (684)
|+|||||++|++|+.|.+.|. .+++|.. ...|++|.+.+.+++...+||+|||+|+++ .++.++.+++..+.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt---~vD~aE~~~e~A~~v 76 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYT---AVDKAESEPELAFAV 76 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhhCCCEEEECcccc---ccccccCCHHHHHHh
Confidence 569999999999999999998 6677743 457999999999999999999999999999 899999999999999
Q ss_pred chhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhh
Q 035631 449 NVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528 (684)
Q Consensus 449 nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~ 528 (684)
|..++.+++++|++.|+++||+||.+||++....| +.|+|+++ |.+.||+||+++|+...... ....+.|.
T Consensus 77 Na~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~------Y~E~D~~~-P~nvYG~sKl~GE~~v~~~~--~~~~I~Rt 147 (281)
T COG1091 77 NATGAENLARAAAEVGARLVHISTDYVFDGEKGGP------YKETDTPN-PLNVYGRSKLAGEEAVRAAG--PRHLILRT 147 (281)
T ss_pred HHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCC------CCCCCCCC-ChhhhhHHHHHHHHHHHHhC--CCEEEEEe
Confidence 99999999999999999999999999999888777 99999999 99999999999986432221 11111211
Q ss_pred hhhhHHHHHHhhhhhhccccccceecCCCCCchHHH---Hhhhccccccc--C--CCccchhhHHHHHHHHHhcC-ccce
Q 035631 529 INFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVT---KLARYNKVVNI--P--NSMTVLDEMLPIAIEMARRN-CRGA 600 (684)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~--~--~~~i~v~D~~~~~~~~~~~~-~~g~ 600 (684)
. -++|... ++|+. ++.+.+..+.. . .+|+++.|+|+++..++... ..|+
T Consensus 148 s---------------------wv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~ 204 (281)
T COG1091 148 S---------------------WVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGV 204 (281)
T ss_pred e---------------------eeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcE
Confidence 1 1223322 35554 44444443322 2 29999999999999999877 5669
Q ss_pred eEecCCCcccHHHHHHHHHhhcCCccccc-CCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhc
Q 035631 601 WNFTNPGVISHNEILELYKEYIDPQLKWS-NFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEP 675 (684)
Q Consensus 601 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~ 675 (684)
||+++.+.+||.|+++.|.+.++.+.... +....+.+..+.||. +..||+.|+ +.....+++|++++++++++.
T Consensus 205 yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~-~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~~ 280 (281)
T COG1091 205 YHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPA-NSSLDTKKLEKAFGLSLPEWREALKALLDEL 280 (281)
T ss_pred EEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCc-ccccchHHHHHHhCCCCccHHHHHHHHHhhc
Confidence 99999999999999999999998655444 455556778888999 999999999 555558999999999998764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=283.75 Aligned_cols=257 Identities=29% Similarity=0.419 Sum_probs=205.8
Q ss_pred EEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcCc
Q 035631 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAA 95 (684)
Q Consensus 16 lItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 95 (684)
|||||+||||++|+++|+++++-++|.++++..+......+ ...+..+++++|++|.+++.+++ .++|+|||+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~---~~~~~~~~~~~Di~d~~~l~~a~--~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDL---QKSGVKEYIQGDITDPESLEEAL--EGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhh---hcccceeEEEeccccHHHHHHHh--cCCceEEEeCc
Confidence 69999999999999999999433899999987543221111 12233449999999999999999 89999999999
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC-CCCCCCCCCC--CCCCCChhHHHHHHH
Q 035631 96 QTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM-ESDIGNPEAS--QLLPTNPYSATKAGA 172 (684)
Q Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~-~~~~~~~e~~--~~~p~~~Y~~sK~~~ 172 (684)
...... ....+..+++|+.||+||+++|++.+ ++||||+||.++++.+.. .+....+|.. +..+.+.|+.||+++
T Consensus 76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A 153 (280)
T PF01073_consen 76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA 153 (280)
T ss_pred cccccC-cccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence 865432 34677899999999999999999987 999999999999886221 1222224443 344778999999999
Q ss_pred HHHHHHHHH---h--cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 173 EMLVMAYHR---S--YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 173 E~~~~~~~~---~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
|+++++... + ..+.+++|||+.||||++ ..+.+.+....+.+......+++....+++|++|+|.+++.+.+.
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d--~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGD--QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCccc--ccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHH
Confidence 999998765 1 248899999999999987 356677777777776667778888889999999999999888752
Q ss_pred ---C-----CCCcEEEecCCCccC-HHHHHHHHHHHhCCCCCc
Q 035631 248 ---G-----VIGHVYNVGTKKERS-VLDVAADICTLFKLEPEK 281 (684)
Q Consensus 248 ---~-----~~~~~~ni~~~~~~t-~~e~~~~i~~~~g~~~~~ 281 (684)
+ ..|+.|+|++++++. +.|++..+.+.+|.+.+.
T Consensus 232 L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 232 LLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred hccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 2 367899999999999 999999999999987653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=303.22 Aligned_cols=279 Identities=17% Similarity=0.120 Sum_probs=213.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
+|||||||||||||++|+++|+++|++|. ++.+|++|.+.+..++++. |
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~--d 92 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV--D 92 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC--C
Confidence 46999999999999999999999998761 3568999999999988865 9
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
+|||+|+.. .......++..+.++|+.|+.+|+++|++.++ ++||+||+.|||...+.+ ..|+++.. |.
T Consensus 93 ~ViHlAa~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~e~~~~~-p~ 162 (348)
T PRK15181 93 YVLHQAALG---SVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLP------KIEERIGR-PL 162 (348)
T ss_pred EEEECcccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCC------CCCCCCCC-CC
Confidence 999999966 33344567888999999999999999999987 699999999998654444 67777776 88
Q ss_pred ChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHHH---------HHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 501 SFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEGL---------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
++|+.+|.++|.+.. ....+.++.+.|+.+++|++. .+.+...+..+.++.++|++.+.|+|
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~------- 235 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDF------- 235 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEee-------
Confidence 999999999998843 445567788888888877642 22223333444456778999999999
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccc-cCCchhHhhhhhccCC
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKW-SNFNLEEQAKVLVAPR 644 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~ 644 (684)
+|++|+|++++.++... .+++||+++++.+|++|+++.+.+.++..... ......-.+.......
T Consensus 236 ----------i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (348)
T PRK15181 236 ----------CYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK 305 (348)
T ss_pred ----------EEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCccc
Confidence 99999999999877542 35699999999999999999999988732110 0000000000001112
Q ss_pred CCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 645 SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 645 ~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
...+|++|+ .++|.+..+++++|+++++++..+.
T Consensus 306 -~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~~ 341 (348)
T PRK15181 306 -HSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKH 341 (348)
T ss_pred -ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 567899999 4688899999999999999876543
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=280.36 Aligned_cols=313 Identities=26% Similarity=0.342 Sum_probs=252.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.+.++|||||+||+|++|+++|++.+...+|.++|..+....+...........++++.+|+.|...+..++ .++ .|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~--~~~-~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF--QGA-VV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--cCc-eE
Confidence 457899999999999999999999955589999998653222211111113567899999999999999998 788 88
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
+|||+...+.-...+++..+++|+.||.+++++|++.+ ++++||+||..|...........+++..|....++|+.||+
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa 158 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKA 158 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHH
Confidence 88888766655556788999999999999999999998 99999999999987766644444455566666689999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh----
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH---- 246 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~---- 246 (684)
.+|+++++.+...++..+.|||+.||||++ ..+++.+...++.++.+...++++.+.++++++.++.+.+.+..
T Consensus 159 ~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd--~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~ 236 (361)
T KOG1430|consen 159 LAEKLVLEANGSDDLYTCALRPPGIYGPGD--KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLD 236 (361)
T ss_pred HHHHHHHHhcCCCCeeEEEEccccccCCCC--ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHh
Confidence 999999988765678999999999999998 67889999999999988888888888999999999998876653
Q ss_pred c--CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec------------------c--CCCCC-------Cccee
Q 035631 247 R--GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV------------------Q--DRPFN-------DHRYF 297 (684)
Q Consensus 247 ~--~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~------------------~--~~~~~-------~~~~~ 297 (684)
+ ...|+.|+|.++++....+++..+.+.+|...+..+.++ . ...+. .....
T Consensus 237 ~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~ 316 (361)
T KOG1430|consen 237 KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRT 316 (361)
T ss_pred cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccc
Confidence 2 236799999999999999998899999998765211110 0 11111 12346
Q ss_pred cCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 298 LDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 298 ~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
++.+|++. |||.|..++++++.+++.|+....
T Consensus 317 f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~ 349 (361)
T KOG1430|consen 317 FSIEKAKRELGYKPLVSLEEAIQRTIHWVASES 349 (361)
T ss_pred cCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence 89999987 999999999999999999887654
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=288.77 Aligned_cols=286 Identities=22% Similarity=0.354 Sum_probs=221.4
Q ss_pred CCCCCEEEEE----cCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-------CCCCCCceEEEecCCCHHH
Q 035631 9 SYKPKKILIT----GAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-------SRASPNFKFLKGDITCADL 77 (684)
Q Consensus 9 ~~~~~~VlIt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-------~~~~~~~~~~~~Dl~d~~~ 77 (684)
..++++|||| |||||||++|++.|+++ ||+|++++|+... ...+.. .....+++++.+|+.|
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~v~~v~~D~~d--- 121 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEP--SQKMKKEPFSRFSELSSAGVKTVWGDPAD--- 121 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcc--hhhhccCchhhhhHhhhcCceEEEecHHH---
Confidence 3456899999 99999999999999999 8999999997532 111110 0112358999999876
Q ss_pred HHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 78 MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 78 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
+..++...++|+|||+++. +..++++|+++|++.+ +++|||+||.++|+.....+ ..|.+
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p---~~E~~ 181 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPP---HVEGD 181 (378)
T ss_pred HHhhhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCC---CCCCC
Confidence 4444444689999999753 1346789999999988 89999999999998754332 34555
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
+..|.+ +|..+|.+++ +.+++++++||+++||++.. ..+...++..+..++++.+++++.+.++|+|++|+
T Consensus 182 ~~~p~~----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~-~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dv 252 (378)
T PLN00016 182 AVKPKA----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNN-KDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDL 252 (378)
T ss_pred cCCCcc----hHHHHHHHHH----HcCCCeEEEeceeEECCCCC-CchHHHHHHHHHcCCceeecCCCCeeeceecHHHH
Confidence 554433 8999998875 34899999999999999753 23556677777888888888888899999999999
Q ss_pred HHHHHHHHhcC-CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC---------CCCCCcceecCHHHHHh-c
Q 035631 238 AEAFDVILHRG-VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD---------RPFNDHRYFLDDQKLKR-L 306 (684)
Q Consensus 238 a~~i~~~~~~~-~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~-l 306 (684)
|+++..++.++ ..+++||+++++.+|+.|+++.+.+.+|.+... ..+.+. .++....+..|++|+++ |
T Consensus 253 a~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i-~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~L 331 (378)
T PLN00016 253 ASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEI-VHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEEL 331 (378)
T ss_pred HHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCce-eecCccccCccccccccccccccccCHHHHHHhc
Confidence 99999999875 356899999999999999999999999976531 111111 11223345679999988 9
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCCc
Q 035631 307 GWKEKTPWEEGLKLTLEWYKKNPHW 331 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~~~~~ 331 (684)
||+|+++++++|+++++||+.++..
T Consensus 332 Gw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 332 GWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999988744
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=279.90 Aligned_cols=297 Identities=23% Similarity=0.348 Sum_probs=226.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+||||||+||||+++++.|+++ |++|++++|+... ...+ ...+++++.+|+.|.+++.+++ .++|+|||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~~~~~l~~~~--~~~d~vi~ 70 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSD--RRNL----EGLDVEIVEGDLRDPASLRKAV--AGCRALFH 70 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCcc--cccc----ccCCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 57999999999999999999999 8999999996421 1111 1236889999999999999988 68999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC---CChhHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP---TNPYSATK 169 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p---~~~Y~~sK 169 (684)
+|+... ....++...++.|+.++.+++++|++.+ +++||++||..+|+..... .+.+|..+..| .+.|+.+|
T Consensus 71 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 71 VAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDG--TPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred eceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCC--CCcCccCCCCcccccChHHHHH
Confidence 998643 2335677889999999999999999987 8999999999999863221 12345555444 46899999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
.++|+.++.++.+++++++++||+.+||++.........++.....+.. +...+ ..++|+|++|+|+++..++++..
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~i~v~D~a~a~~~~~~~~~ 222 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKM-PAYVD--TGLNLVHVDDVAEGHLLALERGR 222 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCC-ceeeC--CCcceEEHHHHHHHHHHHHhCCC
Confidence 9999999999888899999999999999976433333334433333332 22222 33689999999999999998876
Q ss_pred CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc-eeec----------------cCCCCC--------CcceecCHHHHH
Q 035631 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKT-IHYV----------------QDRPFN--------DHRYFLDDQKLK 304 (684)
Q Consensus 250 ~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~-~~~~----------------~~~~~~--------~~~~~~d~~k~~ 304 (684)
.+..|+++ ++.+++.|+++.+.+.+|.+.+.. +... ...+.. .....+|++|++
T Consensus 223 ~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 301 (328)
T TIGR03466 223 IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAV 301 (328)
T ss_pred CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHH
Confidence 77788886 688999999999999999754311 1000 011110 124568999998
Q ss_pred h-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 305 R-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 305 ~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
+ |||+|. +++++|.++++||+++.
T Consensus 302 ~~lg~~p~-~~~~~i~~~~~~~~~~~ 326 (328)
T TIGR03466 302 RELGYRQR-PAREALRDAVEWFRANG 326 (328)
T ss_pred HHcCCCCc-CHHHHHHHHHHHHHHhC
Confidence 7 999995 99999999999998864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=267.07 Aligned_cols=276 Identities=21% Similarity=0.266 Sum_probs=219.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEee------------------eeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEF------------------GTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~------------------~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
.+||+||||.||||+||++.|..+||.|.. -..++.--+-+..++.++ |.|||||++.++
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~ev--D~IyhLAapasp 104 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEV--DQIYHLAAPASP 104 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHh--hhhhhhccCCCC
Confidence 379999999999999999999999998811 112233334455678888 999999999864
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
++ ...+|..++..|+.++.+.|..|++.+.|++++||++|||++...|..+.+|.. -.+.. |.+.|+..|+.+|.
T Consensus 105 ~~---y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~-vnpig-pr~cydegKr~aE~ 179 (350)
T KOG1429|consen 105 PH---YKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGN-VNPIG-PRSCYDEGKRVAET 179 (350)
T ss_pred cc---cccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccc-cCcCC-chhhhhHHHHHHHH
Confidence 44 467889999999999999999999999999999999999998888866665432 22344 78899999999998
Q ss_pred hhhH--HhhhhhhhhhhhhhhhHHH-------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchh
Q 035631 513 LSYL--EIFVLVICIECLINFQVEG-------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLD 583 (684)
Q Consensus 513 ~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 583 (684)
+++. .+.+..+.+.|+.+.+++. +...+.....+..++.++|+|.+.|.| .||.
T Consensus 180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF-----------------~yvs 242 (350)
T KOG1429|consen 180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSF-----------------QYVS 242 (350)
T ss_pred HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEE-----------------EeHH
Confidence 8544 5556777888888877654 456666677778889999999999999 9999
Q ss_pred hHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCc
Q 035631 584 EMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEV 661 (684)
Q Consensus 584 D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~ 661 (684)
|++++++.+++++..+.+|+++++.+|+.|+++.+.+..+........... +. .++ ....|++++ .++|.+.
T Consensus 243 D~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~---~D--dp~-kR~pDit~ake~LgW~Pk 316 (350)
T KOG1429|consen 243 DLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENG---PD--DPR-KRKPDITKAKEQLGWEPK 316 (350)
T ss_pred HHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCC---CC--Ccc-ccCccHHHHHHHhCCCCC
Confidence 999999999999988899999999999999999999999754333222211 11 112 345688988 7789999
Q ss_pred hhHHHHHHHHHhhcc
Q 035631 662 LSIKDSIIKYVLEPN 676 (684)
Q Consensus 662 ~~~~~~l~~~~~~~~ 676 (684)
.+++++|..++.++.
T Consensus 317 v~L~egL~~t~~~fr 331 (350)
T KOG1429|consen 317 VSLREGLPLTVTYFR 331 (350)
T ss_pred CcHHHhhHHHHHHHH
Confidence 999999998876543
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=301.07 Aligned_cols=272 Identities=19% Similarity=0.232 Sum_probs=205.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccC------------------CChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL------------------EDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~------------------~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
.|||||||||||||++|+++|+++|++|..+..+. .+.+.++..+. ++|+|||||+..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~--~~D~ViHlAa~~-- 195 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILL--EVDQIYHLACPA-- 195 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccccc--CCCEEEECceec--
Confidence 47999999999999999999999999986543211 01122222233 359999999966
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccC-----CCCCCCCChhhhhh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKED-----DEPNFTRSFYSKTK 507 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~-----~~~~~p~~~Y~~sK 507 (684)
.......++...+++|+.++.+|+++|++.++++||+||++|||.....+ ++|+ ++.. |.+.|+.+|
T Consensus 196 -~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p------~~E~~~~~~~p~~-p~s~Yg~SK 267 (436)
T PLN02166 196 -SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHP------QKETYWGNVNPIG-ERSCYDEGK 267 (436)
T ss_pred -cchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCC------CCccccccCCCCC-CCCchHHHH
Confidence 23334457889999999999999999999988999999999999655545 4444 3555 788999999
Q ss_pred HhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-------HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 508 AMVTFLSYL--EIFVLVICIECLINFQVEGL-------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 508 ~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
..+|+++.. ...+.++.+.|+.++++.+. ...+...+..+.++.++|++.+.|+|
T Consensus 268 ~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdf---------------- 331 (436)
T PLN02166 268 RTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSF---------------- 331 (436)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEee----------------
Confidence 999988543 34466777788877776542 23333334445557778888888999
Q ss_pred ccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--hh
Q 035631 579 MTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KK 656 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~ 656 (684)
+|++|+++++..++++...|+||+++++.+|+.|+++.+.+.+|.+..+...+.. ...+. ...+|++|+ .+
T Consensus 332 -i~V~Dva~ai~~~~~~~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~-----~~~~~-~~~~d~~Ka~~~L 404 (436)
T PLN02166 332 -QYVSDLVDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT-----ADDPH-KRKPDISKAKELL 404 (436)
T ss_pred -EEHHHHHHHHHHHHhcCCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC-----CCCcc-ccccCHHHHHHHc
Confidence 9999999999999987777899999999999999999999999865433222111 11123 557899999 35
Q ss_pred cCCCchhHHHHHHHHHhhccc
Q 035631 657 EFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 657 ~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+|.+..+|+++|+++++++..
T Consensus 405 Gw~P~~sl~egl~~~i~~~~~ 425 (436)
T PLN02166 405 NWEPKISLREGLPLMVSDFRN 425 (436)
T ss_pred CCCCCCCHHHHHHHHHHHHHH
Confidence 788888999999999887654
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=272.34 Aligned_cols=232 Identities=39% Similarity=0.634 Sum_probs=202.5
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFA 94 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 94 (684)
|||||||||||++++++|+++ |++|+.+.|+......... ..+++++.+|+.|.+.+.+++...++|+|||+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEK-----KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHH-----HTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccc-----cceEEEEEeeccccccccccccccCceEEEEee
Confidence 799999999999999999999 8999999987542221111 017899999999999999999777889999999
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 035631 95 AQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174 (684)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 174 (684)
+.........++...++.|+.++.+++++|++.+ +++||++||+.+|+.....+ .+|+.+..|.++|+.+|..+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~---~~e~~~~~~~~~Y~~~K~~~e~ 149 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEP---IDEDSPINPLSPYGASKRAAEE 149 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSS---BETTSGCCHSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-cccccccccccccccccccc---cccccccccccccccccccccc
Confidence 9764323336777899999999999999999998 69999999999999884332 3677777899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCC---CCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-C
Q 035631 175 LVMAYHRSYGLPTITTRGNNVYGPN---QFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-I 250 (684)
Q Consensus 175 ~~~~~~~~~~~~~~ilR~~~v~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~ 250 (684)
.++.+.++++++++++||+.+||+. .....+++.++..+..++++.+++++++.++|+|++|+|++++.+++++. .
T Consensus 150 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 229 (236)
T PF01370_consen 150 LLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAA 229 (236)
T ss_dssp HHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCC
Confidence 9999998889999999999999999 55568999999999999999999999999999999999999999999887 8
Q ss_pred CcEEEec
Q 035631 251 GHVYNVG 257 (684)
Q Consensus 251 ~~~~ni~ 257 (684)
+++|||+
T Consensus 230 ~~~yNig 236 (236)
T PF01370_consen 230 GGIYNIG 236 (236)
T ss_dssp TEEEEES
T ss_pred CCEEEeC
Confidence 8999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=289.39 Aligned_cols=277 Identities=19% Similarity=0.209 Sum_probs=204.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
++||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 4899999999999999999999998762 3357999999999999988899
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC----eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV----LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|||+|+.. .......++....++|+.|+.+++++|++.++ ++||+||++|||.....+ ++|+++..
T Consensus 81 ~ViH~Aa~~---~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~ 151 (343)
T TIGR01472 81 EIYNLAAQS---HVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIP------QNETTPFY 151 (343)
T ss_pred EEEECCccc---ccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCC------CCCCCCCC
Confidence 999999976 22333456678889999999999999998764 699999999998654444 78888887
Q ss_pred CCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH-----HHhhh---hhhccccc-cceecCCCCCchHHHHh
Q 035631 498 FTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL-----LKAYE---NVCTLRLR-MPISSDLSNPRNFVTKL 566 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~-~~~~g~~~~~~~~~~~~ 566 (684)
|.+.|+.||..+|.+.... ..+..+...++.+.++++. ...+. ..+..+.. ..++|++.+.|+|
T Consensus 152 -p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~---- 226 (343)
T TIGR01472 152 -PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDW---- 226 (343)
T ss_pred -CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCc----
Confidence 9999999999999885443 3344444444443333221 11111 11222222 3455888899999
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccC----------------
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSN---------------- 630 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~---------------- 630 (684)
+|++|+|++++.+++++..+.||+++++++|+.|+++.+.+.+|.+..+..
T Consensus 227 -------------i~V~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (343)
T TIGR01472 227 -------------GHAKDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVH 293 (343)
T ss_pred -------------eeHHHHHHHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCcee
Confidence 999999999999998766689999999999999999999999986432210
Q ss_pred CchhHhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcc
Q 035631 631 FNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~ 676 (684)
+............. ...+|++|+ .++|.+..+++++|+++++++.
T Consensus 294 ~~~~~~~~~~~~~~-~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~ 340 (343)
T TIGR01472 294 VEIDPRYFRPTEVD-LLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDL 340 (343)
T ss_pred EEeCccccCCCccc-hhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 00000000001112 446799999 5688899999999999998765
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=278.54 Aligned_cols=276 Identities=25% Similarity=0.348 Sum_probs=216.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+||||||+||||+++++.|++++.+++|++++|+... ...+.......+++++.+|+.|.+.+.+++ .++|+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~--~~iD~V 78 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK--QWEMQQKFPAPCLRFFIGDVRDKERLTRAL--RGVDYV 78 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH--HHHHHHHhCCCcEEEEEccCCCHHHHHHHH--hcCCEE
Confidence 4589999999999999999999998434899999886421 111111111246889999999999999988 679999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+||....+....++...+++|+.++.+++++|++.+ +++||++||.. +..|.++|+.+|.
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~-----------------~~~p~~~Y~~sK~ 140 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK-----------------AANPINLYGATKL 140 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC-----------------CCCCCCHHHHHHH
Confidence 99999765444556778899999999999999999987 88999999942 2245678999999
Q ss_pred HHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC-ceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 171 GAEMLVMAYH---RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 171 ~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
++|.+++.+. ..++++++++||++||||+. .+++.+...+..+. ++++ .++.+.++|+|++|++++++.+++
T Consensus 141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~---~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~ 216 (324)
T TIGR03589 141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG---SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLE 216 (324)
T ss_pred HHHHHHHHHHhhccccCcEEEEEeecceeCCCC---CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHh
Confidence 9999997754 34689999999999999864 57788787777665 5666 467788999999999999999998
Q ss_pred cCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCC-CcceecCHHHHHh-cCCcccCCHHHHHH
Q 035631 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN-DHRYFLDDQKLKR-LGWKEKTPWEEGLK 319 (684)
Q Consensus 247 ~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~d~~k~~~-lg~~p~~~~~e~i~ 319 (684)
+...+++| ++++..+++.|+++.+.+..+. ...+.++.. .....+|.+|+++ |||+|+++++++++
T Consensus 217 ~~~~~~~~-~~~~~~~sv~el~~~i~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 217 RMLGGEIF-VPKIPSMKITDLAEAMAPECPH------KIVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred hCCCCCEE-ccCCCcEEHHHHHHHHHhhCCe------eEeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 75556677 5767789999999999986532 222223322 1335579999987 99999999998885
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=260.82 Aligned_cols=279 Identities=17% Similarity=0.196 Sum_probs=231.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe--------------------------EeeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA--------------------------FEFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~--------------------------v~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
.+++||||+||||++.+.++..+.-+ ..++.+|+.+...+..++..-++|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 48999999999999999999877431 1788999999999988888778899999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCCCCCCCCCCCc-cCCCCCCCCCh
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSMHPQGSSIGFK-EDDEPNFTRSF 502 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~-e~~~~~~p~~~ 502 (684)
+|+.+ +++.+..++..+...|+.++..||++++..+ + +|||+||..|||+..... .. |.+.++ |.++
T Consensus 87 faa~t---~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~------~~~E~s~~n-Ptnp 156 (331)
T KOG0747|consen 87 FAAQT---HVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA------VVGEASLLN-PTNP 156 (331)
T ss_pred hHhhh---hhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc------cccccccCC-CCCc
Confidence 99988 7999999999999999999999999999985 5 599999999999665543 34 888888 9999
Q ss_pred hhhhhHhHhhh--hhHHhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc
Q 035631 503 YSKTKAMVTFL--SYLEIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 503 Y~~sK~~~E~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
|+.||+++|++ .++..++.++.+.|..++||++ +.+.+......+...++-|+|.+.|.|
T Consensus 157 yAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~------------- 223 (331)
T KOG0747|consen 157 YAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSY------------- 223 (331)
T ss_pred hHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceee-------------
Confidence 99999999988 6777888889999999998776 455555666667778999999999999
Q ss_pred CCCccchhhHHHHHHHHHhcCc-cceeEecCCCcccHHHHHHHHHhhcCCccc---ccCCchhHhhhhhccCCCCCcCCc
Q 035631 576 PNSMTVLDEMLPIAIEMARRNC-RGAWNFTNPGVISHNEILELYKEYIDPQLK---WSNFNLEEQAKVLVAPRSNNHMDV 651 (684)
Q Consensus 576 ~~~~i~v~D~~~~~~~~~~~~~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~d~ 651 (684)
+|++|+++++..++++.. +.+|||++..+++..|+++.+++.+.++.. ..+...- .++...... .+.+++
T Consensus 224 ----l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~-v~dRp~nd~-Ry~~~~ 297 (331)
T KOG0747|consen 224 ----LYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF-VEDRPYNDL-RYFLDD 297 (331)
T ss_pred ----EeHHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee-cCCCCcccc-cccccH
Confidence 999999999999999875 669999999999999999999998875322 1111000 011111122 578999
Q ss_pred hhh-hhcCCCchhHHHHHHHHHhhccccc
Q 035631 652 TKL-KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 652 ~kl-~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+|+ ++||.+.++|++||+.+++++.+..
T Consensus 298 eKik~LGw~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 298 EKIKKLGWRPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred HHHHhcCCcccCcHHHHHHHHHHHHHhhh
Confidence 999 8899999999999999999887643
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-32 Score=280.53 Aligned_cols=296 Identities=17% Similarity=0.163 Sum_probs=213.5
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCC----CCCCceEEEecCCCHHHHHHh
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSR----ASPNFKFLKGDITCADLMNYL 81 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~----~~~~~~~~~~Dl~d~~~~~~~ 81 (684)
+..+++|+||||||+||||++++++|+++ |++|+++.|+.... ....+.... ...+++++.+|+.|.+.+.++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~ 125 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA 125 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence 34567789999999999999999999999 89999887753211 111111000 013578899999999999998
Q ss_pred hccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCc--ccccCCCCCC-CCCCCC---
Q 035631 82 LVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTD--EVYGETDMES-DIGNPE--- 155 (684)
Q Consensus 82 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~--~vyg~~~~~~-~~~~~e--- 155 (684)
+ .++|+|||+|+...............++|+.++.+++++|++...++||||+||. .+||...... ....+|
T Consensus 126 i--~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~ 203 (367)
T PLN02686 126 F--DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESW 203 (367)
T ss_pred H--HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCC
Confidence 8 5799999999976433211122355678999999999999986348999999996 5787421100 001122
Q ss_pred ---CCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ---ASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ---~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+..|.++|+.+|.++|.+++.++++++++++++||++||||+...... ..++ ....+. +.+++++. ++|+
T Consensus 204 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~-~~~~-~~~~g~-~~~~g~g~--~~~v 278 (367)
T PLN02686 204 SDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS-TATI-AYLKGA-QEMLADGL--LATA 278 (367)
T ss_pred CChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC-hhHH-HHhcCC-CccCCCCC--cCeE
Confidence 23445677899999999999999988889999999999999997532221 1122 233443 44555543 5799
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CCCCcceecCHHHHHh-cC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PFNDHRYFLDDQKLKR-LG 307 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~-lg 307 (684)
|++|+|++++.+++.. ..+++| +++++.+++.|+++.+.+.+|.+.. ....+.. +.....+.+|++|+++ ||
T Consensus 279 ~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~d~~~~~~d~~kl~~~l~ 355 (367)
T PLN02686 279 DVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN--KIAGNSSSDDTPARFELSNKKLSRLMS 355 (367)
T ss_pred EHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC--cCCCchhhcCCcccccccHHHHHHHHH
Confidence 9999999999999852 345688 8889999999999999999986543 2222223 3455677899999998 99
Q ss_pred CcccCCH
Q 035631 308 WKEKTPW 314 (684)
Q Consensus 308 ~~p~~~~ 314 (684)
|+|+-..
T Consensus 356 ~~~~~~~ 362 (367)
T PLN02686 356 RTRRCCY 362 (367)
T ss_pred Hhhhccc
Confidence 9996443
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=292.24 Aligned_cols=276 Identities=18% Similarity=0.224 Sum_probs=201.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccC------------------CChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL------------------EDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~------------------~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|||||||||||||++|+++|+++|++|..+..+. .+.+.++..+.+ +|+|||||+..
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~--~D~ViHlAa~~--- 194 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLE--VDQIYHLACPA--- 194 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcC--CCEEEEeeeec---
Confidence 6999999999999999999999999885442110 011122233433 59999999966
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
.......++...+++|+.++.+|+++|++.++++||+||+.||+.....+..|.. ..+..+.. |.+.|+.+|.++|.+
T Consensus 195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~-~~~~~P~~-~~s~Y~~SK~~aE~~ 272 (442)
T PLN02206 195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETY-WGNVNPIG-VRSCYDEGKRTAETL 272 (442)
T ss_pred chhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccc-cccCCCCC-ccchHHHHHHHHHHH
Confidence 2233345788999999999999999999999999999999999865544422211 11223444 678999999999988
Q ss_pred hh--HHhhhhhhhhhhhhhhhHHHH-------HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhh
Q 035631 514 SY--LEIFVLVICIECLINFQVEGL-------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDE 584 (684)
Q Consensus 514 ~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 584 (684)
.. ....+..+.+.|+.++++++. ...+...+....++.++|++.+.|+| +|++|
T Consensus 273 ~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdf-----------------i~V~D 335 (442)
T PLN02206 273 TMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF-----------------QFVSD 335 (442)
T ss_pred HHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeE-----------------EeHHH
Confidence 54 344566777777777776541 22222333334456777888888899 99999
Q ss_pred HHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCch
Q 035631 585 MLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVL 662 (684)
Q Consensus 585 ~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~ 662 (684)
+|++++.++++...|.||+++++.+|+.|+++.+.+.+|.+..+...+.. ...+. ...+|++|+ .++|.+..
T Consensus 336 va~ai~~a~e~~~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~-----~~~~~-~~~~d~sKa~~~LGw~P~~ 409 (442)
T PLN02206 336 LVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT-----EDDPH-KRKPDITKAKELLGWEPKV 409 (442)
T ss_pred HHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC-----CCCcc-ccccCHHHHHHHcCCCCCC
Confidence 99999999987777899999999999999999999999864433221111 11122 456899999 46777888
Q ss_pred hHHHHHHHHHhhccc
Q 035631 663 SIKDSIIKYVLEPNK 677 (684)
Q Consensus 663 ~~~~~l~~~~~~~~~ 677 (684)
+++++|+++++++.+
T Consensus 410 ~l~egl~~~~~~~~~ 424 (442)
T PLN02206 410 SLRQGLPLMVKDFRQ 424 (442)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999887644
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=289.29 Aligned_cols=280 Identities=15% Similarity=0.111 Sum_probs=206.0
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------------------eeeccCCCh
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------------------FGTGRLEDK 408 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------------------~~~~d~~d~ 408 (684)
++|+||||||+||||++|+++|+++|++|. ++.+|++|.
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~ 125 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF 125 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH
Confidence 346999999999999999999999998663 345789999
Q ss_pred hHHHHHHHhcCCCeEEEcceecCCCCcccccc---chhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCC
Q 035631 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCES---HRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHP 483 (684)
Q Consensus 409 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~ 483 (684)
+.+.+++++.++|+|||+|+..+ ...... .....+++|+.|+.++|++|++.++ ++|++||+.|||... .+
T Consensus 126 ~~v~~~l~~~~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~ 201 (442)
T PLN02572 126 EFLSEAFKSFEPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-ID 201 (442)
T ss_pred HHHHHHHHhCCCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CC
Confidence 99999999878899999998652 222222 2356678999999999999999875 699999999998532 22
Q ss_pred CCCCCCCc------cCC---CCCCCCChhhhhhHhHhhhh--hHHhhhhhhhhhhhhhhhHHHHH---------------
Q 035631 484 QGSSIGFK------EDD---EPNFTRSFYSKTKAMVTFLS--YLEIFVLVICIECLINFQVEGLL--------------- 537 (684)
Q Consensus 484 ~~~~~~~~------e~~---~~~~p~~~Y~~sK~~~E~~~--~~~~~~~~~~~~~~~~~~~~~~~--------------- 537 (684)
..|. +++ |++ +.. |.++||.||.++|.++ +...++.++.+.|+.+++|++..
T Consensus 202 ~~E~-~i~~~~~~~e~~~~~~~~-P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~ 279 (442)
T PLN02572 202 IEEG-YITITHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD 279 (442)
T ss_pred Cccc-ccccccccccccccCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence 2221 121 232 344 8889999999999884 34555778888888888776521
Q ss_pred ----Hhh---hhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-cc---ceeEecCC
Q 035631 538 ----KAY---ENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CR---GAWNFTNP 606 (684)
Q Consensus 538 ----~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~---g~~ni~~~ 606 (684)
..+ ...+..+.++.++|+|.+.|+| +||+|+|++++.++++. .. .+||+++
T Consensus 280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdf-----------------i~V~Dva~a~~~al~~~~~~g~~~i~Nigs- 341 (442)
T PLN02572 280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGF-----------------LDIRDTVRCIEIAIANPAKPGEFRVFNQFT- 341 (442)
T ss_pred cchhhHHHHHHHHHhcCCCceecCCCCEEECe-----------------EEHHHHHHHHHHHHhChhhcCceeEEEeCC-
Confidence 111 1222234456778899999999 99999999999999865 23 3799976
Q ss_pred CcccHHHHHHHHHhh---cCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCch---hHHHHHHHHHhhccc
Q 035631 607 GVISHNEILELYKEY---IDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVL---SIKDSIIKYVLEPNK 677 (684)
Q Consensus 607 ~~~s~~e~~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~---~~~~~l~~~~~~~~~ 677 (684)
+.+|+.|+++.+.+. +|.+..+...+... .+ .... ...+|++|+ +++|.+.. ++.++|.+++.++++
T Consensus 342 ~~~si~el~~~i~~~~~~~g~~~~~~~~p~~~-~~--~~~~-~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~ 415 (442)
T PLN02572 342 EQFSVNELAKLVTKAGEKLGLDVEVISVPNPR-VE--AEEH-YYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKD 415 (442)
T ss_pred CceeHHHHHHHHHHHHHhhCCCCCeeeCCCCc-cc--cccc-ccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 689999999999998 88654443222111 01 1112 556799999 77888777 889999999887754
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=244.40 Aligned_cols=312 Identities=25% Similarity=0.293 Sum_probs=250.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc--CCC--CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN--LHP--SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
|+|+.||||-||+-|+.|++.|+++ |++|+++.|..+...... |.. .....++.++.+||.|...+.+++...+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 4578999999999999999999999 999999999754333322 222 2223458899999999999999999899
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ-VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
||-|+|+|+...+..+++.|+...+++..|+.+|+++.+..+. ..||...||...||..... +..|.+|..|.++|
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~---pq~E~TPFyPrSPY 155 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEI---PQKETTPFYPRSPY 155 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccC---ccccCCCCCCCCHH
Confidence 9999999999999999999999999999999999999998764 5799999999999987664 45899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCceE-EecCCCceEecccHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP---EKLIPKFILLAMKGQQLP-IHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~i 241 (684)
+.+|.-+--+..+|.+.+|+-.+.=..++-=+|.... .+-+...+.+++.|..-. ..|+-+..|||-|+.|.++++
T Consensus 156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 9999999999999999998877665555555554322 233444555566654333 348889999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCC-----------------cceeecc--CCCCCCcceecCHHH
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE-----------------KTIHYVQ--DRPFNDHRYFLDDQK 302 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~-----------------~~~~~~~--~~~~~~~~~~~d~~k 302 (684)
+.+++++. ...|.+++|+..|++|+++...+..|.+.. ..+...+ -+|....-...|.+|
T Consensus 236 wlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~K 314 (345)
T COG1089 236 WLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTK 314 (345)
T ss_pred HHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHH
Confidence 99999877 458999999999999999999999985432 1122211 122233344679999
Q ss_pred HHh-cCCcccCCHHHHHHHHHHHHHhC
Q 035631 303 LKR-LGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 303 ~~~-lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
+++ |||+|.+++++-+++|+++....
T Consensus 315 A~~~LGW~~~~~~~elv~~Mv~~dl~~ 341 (345)
T COG1089 315 AKEKLGWRPEVSLEELVREMVEADLEA 341 (345)
T ss_pred HHHHcCCccccCHHHHHHHHHHHHHHH
Confidence 986 99999999999999999876544
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=234.37 Aligned_cols=291 Identities=21% Similarity=0.305 Sum_probs=238.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++||||||++|.+|+++.+.+.+.+.. -+-+.... ..+||.+.++.+.+|+..+|.+|
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~ekPthV 59 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFESEKPTHV 59 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhccCCcee
Confidence 478999999999999999999998431 22222221 15899999999999999999999
Q ss_pred EEcCccCC-cCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC----CCCCCCC-h
Q 035631 91 MHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA----SQLLPTN-P 164 (684)
Q Consensus 91 ih~a~~~~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~----~~~~p~~-~ 164 (684)
||+|+... .-.....+.+.+..|+....|++..|.+.| +++++++.|+|+|.+....+. +|. -|+.|.+ .
T Consensus 60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPI---dEtmvh~gpphpsN~g 135 (315)
T KOG1431|consen 60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPI---DETMVHNGPPHPSNFG 135 (315)
T ss_pred eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCC---CHHHhccCCCCCCchH
Confidence 99999654 223335667889999999999999999998 999999999999987766543 343 3455554 5
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHH----HcCC-ceEEecCCCceEecccHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF----PEKLIPKFILLA----MKGQ-QLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~i~~~ 235 (684)
|+..|.++...-+.|..++|..++..-|.++|||.+. ...+++.++++. ..+. .+.+||.|.-.|+|+|.+
T Consensus 136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~ 215 (315)
T KOG1431|consen 136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD 215 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence 9999998888889999999999999999999999753 224666666554 3333 788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCC--ccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCC
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKK--ERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTP 313 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~--~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~ 313 (684)
|+|++++.++.+-..-+..+++.++ .+|++|+++++.++.+.... +.|.-..+........|++|+++|+|.|+++
T Consensus 216 DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~--l~~DttK~DGq~kKtasnsKL~sl~pd~~ft 293 (315)
T KOG1431|consen 216 DLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGK--LVWDTTKSDGQFKKTASNSKLRSLLPDFKFT 293 (315)
T ss_pred HHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCce--EEeeccCCCCCcccccchHHHHHhCCCcccC
Confidence 9999999999876666778888887 89999999999999987654 6666566666667789999999999999877
Q ss_pred -HHHHHHHHHHHHHhCC
Q 035631 314 -WEEGLKLTLEWYKKNP 329 (684)
Q Consensus 314 -~~e~i~~~i~~~~~~~ 329 (684)
++++|.++++||.++-
T Consensus 294 ~l~~ai~~t~~Wy~~Ny 310 (315)
T KOG1431|consen 294 PLEQAISETVQWYLDNY 310 (315)
T ss_pred hHHHHHHHHHHHHHHhH
Confidence 9999999999998764
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=282.39 Aligned_cols=279 Identities=15% Similarity=0.152 Sum_probs=205.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------eeeeccCC-ChhHHHHHHHhcCCCeEEEccee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------EFGTGRLE-DKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~d~~-d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
||+|||||||||||++|+++|+++ |++| +++.+|+. +.+.+.+++++. |+|||||+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--d~ViH~aa~ 78 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKC--DVILPLVAI 78 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCC--CEEEECccc
Confidence 369999999999999999999986 6765 46677887 667777777765 999999996
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCC------CCCCChh
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP------NFTRSFY 503 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~------~~p~~~Y 503 (684)
. .......++...+++|+.++.+++++|++.+.++||+||+.|||...+.+ ++|++++ ..|.+.|
T Consensus 79 ~---~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~------~~ee~~~~~~~~~~~p~~~Y 149 (347)
T PRK11908 79 A---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEE------FDPEASPLVYGPINKPRWIY 149 (347)
T ss_pred C---ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcC------cCccccccccCcCCCccchH
Confidence 5 22334577888999999999999999999887899999999998654433 5555432 1267789
Q ss_pred hhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-------------HHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 504 SKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-------------LKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 504 ~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+.+|.++|++... ...+.++.+.|+.++++++. ...+...+..+.++.+.+++.+.|+|
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~------ 223 (347)
T PRK11908 150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAF------ 223 (347)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecc------
Confidence 9999999988544 44567788888877776542 12222333345556677778888899
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCC-CcccHHHHHHHHHhhcCCcccc---------cCCchh
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNP-GVISHNEILELYKEYIDPQLKW---------SNFNLE 634 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~---------~~~~~~ 634 (684)
+|++|++++++.+++++ .+++||++++ ..+|++|+++.+.+.+|....+ ......
T Consensus 224 -----------i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
T PRK11908 224 -----------TDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSG 292 (347)
T ss_pred -----------ccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCch
Confidence 99999999999999875 2469999997 4799999999999998853222 001110
Q ss_pred Hhhhhh-ccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 635 EQAKVL-VAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 635 ~~~~~~-~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
...... .... ....|++|+ .++|.+..+++++++++++++...
T Consensus 293 ~~~~~~~~~~~-~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 293 AYYGKGYQDVQ-NRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred hccCcCcchhc-cccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 000000 0111 344578888 567888889999999999876543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-32 Score=281.50 Aligned_cols=281 Identities=17% Similarity=0.131 Sum_probs=210.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|+|||||||||||++|++.|+++|+++ .++.+|++|.+.+.+++++.++|+|||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 589999999999999999999999753 1346799999999999988778999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc---------CC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK---------NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||.. ........+..++++|+.++.+++++|.+. ++ ++|++||.++|+..... ..+++|+++.
T Consensus 82 A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~----~~~~~E~~~~ 154 (355)
T PRK10217 82 AAES---HVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST----DDFFTETTPY 154 (355)
T ss_pred Cccc---CcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC----CCCcCCCCCC
Confidence 9965 233334567899999999999999999863 33 79999999999843211 1227888877
Q ss_pred CCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 497 NFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
. |.+.|+.||..+|.+... ...+.++.+.|+.++++++. .+.+......+.+++++|++++.|+|
T Consensus 155 ~-p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~------- 226 (355)
T PRK10217 155 A-PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDW------- 226 (355)
T ss_pred C-CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCc-------
Confidence 7 899999999999988543 45566777788877776552 22222333334456777899999999
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCch-------hHhhhhhc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNL-------EEQAKVLV 641 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------~~~~~~~~ 641 (684)
+|++|+|+++..++++. .+++||+++++.+|+.|+++.+++.+|......+... ........
T Consensus 227 ----------i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T PRK10217 227 ----------LYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPG 296 (355)
T ss_pred ----------CcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCC
Confidence 99999999999999876 4569999999999999999999999884221111100 00000000
Q ss_pred cCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 642 APRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 642 ~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
... ...+|++|+ .++|.+..+++++|+++++++...
T Consensus 297 ~~~-~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 297 HDL-RYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred CCc-ccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 112 457899999 457878889999999999876543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.9e-32 Score=279.13 Aligned_cols=276 Identities=18% Similarity=0.164 Sum_probs=204.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
.|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+..+++..++|
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 36899999999999999999999998762 3457999999999999988899
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC------eEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV------LLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~------~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+|+.. .......++...+++|+.++.+++++|.+.++ ++|++||+++||.... + ++|+++
T Consensus 86 ~Vih~A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~------~~E~~~ 155 (340)
T PLN02653 86 EVYNLAAQS---HVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-P------QSETTP 155 (340)
T ss_pred EEEECCccc---chhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-C------CCCCCC
Confidence 999999975 33334456778889999999999999998764 6999999999986543 4 788888
Q ss_pred CCCCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH--------HHhhhhhhccccccce-ecCCCCCchHHH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL--------LKAYENVCTLRLRMPI-SSDLSNPRNFVT 564 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 564 (684)
.. |.+.|+.||.++|.+.... ..+..+...++.+.++++. ...+...+..+.++.+ .|++.+.|+|
T Consensus 156 ~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~-- 232 (340)
T PLN02653 156 FH-PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW-- 232 (340)
T ss_pred CC-CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc--
Confidence 87 9999999999999885433 3333333334433332221 1111112223333444 4888899999
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccc-cCCchhHhhhhhccC
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKW-SNFNLEEQAKVLVAP 643 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~ 643 (684)
+|++|+|++++.++++..++.||+++++++|+.|+++.+.+.+|.+... ..+..... .....
T Consensus 233 ---------------i~v~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~ 295 (340)
T PLN02653 233 ---------------GFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYF--RPAEV 295 (340)
T ss_pred ---------------eeHHHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccC--Ccccc
Confidence 9999999999999987766899999999999999999999999853111 11111100 00111
Q ss_pred CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 644 RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 644 ~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
. ...+|++|+ .++|.+..+++++|++++++..+
T Consensus 296 ~-~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 296 D-NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred c-cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 2 456799999 45888899999999999986543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=281.33 Aligned_cols=285 Identities=18% Similarity=0.191 Sum_probs=203.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
..|||||||||||||++|+++|+++ |++| +++.+|++|.+.+.++++++ |+|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--d~V 90 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA--DLT 90 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC--CEE
Confidence 3479999999999999999999998 5755 34567899999999999876 999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCC---------ccCC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGF---------KEDD 494 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~---------~e~~ 494 (684)
||||+... ......++...+..|+.++.+++++|++.+.++||+||++|||.....+..+..|+ +|+.
T Consensus 91 iHlAa~~~---~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~ 167 (386)
T PLN02427 91 INLAAICT---PADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDE 167 (386)
T ss_pred EEcccccC---hhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccc
Confidence 99999652 22223456667788999999999999988878999999999986433222222222 2222
Q ss_pred CC------CCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH----------------HHhhhhhhcccccc
Q 035631 495 EP------NFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL----------------LKAYENVCTLRLRM 550 (684)
Q Consensus 495 ~~------~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 550 (684)
.+ ..|.+.|+.+|.++|++++. ...+.++.+.|+.++++.+. ...+...+..+.++
T Consensus 168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 247 (386)
T PLN02427 168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL 247 (386)
T ss_pred cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence 11 11457899999999988543 34567888888887776542 11112223344456
Q ss_pred ceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCC-CcccHHHHHHHHHhhcCCcc
Q 035631 551 PISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNP-GVISHNEILELYKEYIDPQL 626 (684)
Q Consensus 551 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~ 626 (684)
.++|++.+.|+| +|++|+|++++.++++. .+++||++++ +.+|+.|+++.+.+.+|...
T Consensus 248 ~~~g~g~~~r~~-----------------i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~ 310 (386)
T PLN02427 248 KLVDGGQSQRTF-----------------VYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVS 310 (386)
T ss_pred EEECCCCceECc-----------------EeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccc
Confidence 677778888888 99999999999999875 2459999998 59999999999999988421
Q ss_pred cc-------cCCchhHhhhhh-ccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 627 KW-------SNFNLEEQAKVL-VAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 627 ~~-------~~~~~~~~~~~~-~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.. ..++........ .... ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 311 GEPALEEPTVDVSSKEFYGEGYDDSD-KRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred ccccccccccccCcccccCccccchh-hccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 11 011111000000 1122 557799999 45888999999999999887543
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=278.47 Aligned_cols=276 Identities=20% Similarity=0.231 Sum_probs=205.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
+|+|||||||||||++|+++|+++||+|. ++.+|++|.+.+..++.+. |+|||+|+..+
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~Vih~Aa~~~- 97 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGV--DHVFNLAADMG- 97 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCC--CEEEEcccccC-
Confidence 47999999999999999999999999773 3346888888887777765 99999998652
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC--CCCCCCChhhhhhHh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD--EPNFTRSFYSKTKAM 509 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~--~~~~p~~~Y~~sK~~ 509 (684)
.......++....+.|+.++.+|+++|++.++ ++||+||+.||+..... .+..++.|++ +.. |.+.|+.+|..
T Consensus 98 -~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~--~~~~~~~E~~~~p~~-p~s~Yg~sK~~ 173 (370)
T PLN02695 98 -GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQL--ETNVSLKESDAWPAE-PQDAYGLEKLA 173 (370)
T ss_pred -CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCcccc--CcCCCcCcccCCCCC-CCCHHHHHHHH
Confidence 11122345566788999999999999999987 69999999999854321 1122366665 455 88999999999
Q ss_pred Hhhhhh--HHhhhhhhhhhhhhhhhHHHH---------HHhhhhhh-ccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 510 VTFLSY--LEIFVLVICIECLINFQVEGL---------LKAYENVC-TLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 510 ~E~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
+|.+.. ....+.++.+.|+.++++++. ...+...+ ....++.++|++.+.|+|
T Consensus 174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~--------------- 238 (370)
T PLN02695 174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSF--------------- 238 (370)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeE---------------
Confidence 998843 344567778888887776532 11222222 223456778888888999
Q ss_pred CccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhhh--
Q 035631 578 SMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLK-- 655 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~-- 655 (684)
+|++|++++++.++++...++||+++++.+|++|+++.+.+..|.+..+...+.. ... . ...+|++|++
T Consensus 239 --i~v~D~a~ai~~~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~----~~~--~-~~~~d~sk~~~~ 309 (370)
T PLN02695 239 --TFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP----EGV--R-GRNSDNTLIKEK 309 (370)
T ss_pred --EeHHHHHHHHHHHHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC----CCc--c-ccccCHHHHHHh
Confidence 9999999999999887667899999999999999999999998864433322211 011 1 2357999993
Q ss_pred hcCCCchhHHHHHHHHHhhccc
Q 035631 656 KEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 656 ~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
++|.+..+|+++|+++++++..
T Consensus 310 lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 310 LGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred cCCCCCCCHHHHHHHHHHHHHH
Confidence 4787888999999999887654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=266.93 Aligned_cols=269 Identities=19% Similarity=0.220 Sum_probs=203.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeee---eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFG---TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTN 449 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~---~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~n 449 (684)
||||||||||||++++++|+++|++|..+ .+|+.|.+.+..++++.++|+|||+|+.. .......++...+++|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~~~~n 77 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYT---DVDGAESDPEKAFAVN 77 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccc---cccccccCHHHHHHHH
Confidence 58999999999999999999999998654 35899999999999998999999999965 3333445677889999
Q ss_pred hhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhh
Q 035631 450 VMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLI 529 (684)
Q Consensus 450 v~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~ 529 (684)
+.++.+++++|++.+.++|++||++||++....+ ++|+++++ |.+.|+.+|..+|.++... +.++++.|+.
T Consensus 78 ~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~------~~E~~~~~-~~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~ 148 (287)
T TIGR01214 78 ALAPQNLARAAARHGARLVHISTDYVFDGEGKRP------YREDDATN-PLNVYGQSKLAGEQAIRAA--GPNALIVRTS 148 (287)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCC------CCCCCCCC-CcchhhHHHHHHHHHHHHh--CCCeEEEEee
Confidence 9999999999999888999999999998655445 88988887 8999999999999876543 4567778877
Q ss_pred hhhHHHH----HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC--ccceeEe
Q 035631 530 NFQVEGL----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN--CRGAWNF 603 (684)
Q Consensus 530 ~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni 603 (684)
.+++++. ...+...+....++.+.++ ..++| +|++|+|+++..++++. .+|+||+
T Consensus 149 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------v~v~Dva~a~~~~~~~~~~~~~~~ni 209 (287)
T TIGR01214 149 WLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSP-----------------TYAKDLARVIAALLQRLARARGVYHL 209 (287)
T ss_pred ecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCC-----------------cCHHHHHHHHHHHHhhccCCCCeEEE
Confidence 6665431 1112222222222333332 33455 99999999999999875 5789999
Q ss_pred cCCCcccHHHHHHHHHhhcCCcccccC------CchhHhhhhhccCCCCCcCCchhhh--hcCCCchhHHHHHHHHHhh
Q 035631 604 TNPGVISHNEILELYKEYIDPQLKWSN------FNLEEQAKVLVAPRSNNHMDVTKLK--KEFPEVLSIKDSIIKYVLE 674 (684)
Q Consensus 604 ~~~~~~s~~e~~~~i~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~d~~kl~--~~~~~~~~~~~~l~~~~~~ 674 (684)
++++.+|+.|+++.+.+.+|.+....+ ......+....++. +..+|++|++ ++| +.++|+++|++++++
T Consensus 210 ~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 210 ANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPA-YSVLDNTKLVKTLGT-PLPHWREALRAYLQE 286 (287)
T ss_pred ECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCC-ccccchHHHHHHcCC-CCccHHHHHHHHHhh
Confidence 999999999999999999996543211 11111111122233 6689999993 355 678999999998864
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=252.72 Aligned_cols=275 Identities=17% Similarity=0.140 Sum_probs=212.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++||||||+||||+|.+-+|+++|+.| .+..+|++|.+.++++|+..++|.|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 589999999999999999999999965 78899999999999999999999999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+|+.. .+..+.++|..++.+|+.|+.+||+.|++++++ +||.||+.|||.+..-| ++|+++...|.++|
T Consensus 83 Hfa~~~---~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip------~te~~~t~~p~~py 153 (343)
T KOG1371|consen 83 HFAALA---AVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVP------ITEEDPTDQPTNPY 153 (343)
T ss_pred eehhhh---ccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceee------ccCcCCCCCCCCcc
Confidence 999976 566788999999999999999999999999985 99999999999766655 99999887799999
Q ss_pred hhhhHhHhhhhhHHhhhhhhh--hhhhhhhhHHHH---------------HHhhhhhhccccc-cceec------CCCCC
Q 035631 504 SKTKAMVTFLSYLEIFVLVIC--IECLINFQVEGL---------------LKAYENVCTLRLR-MPISS------DLSNP 559 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~~~~~~~--~~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~~~g------~~~~~ 559 (684)
|.+|...|.+........... ..|..+..+-.+ .+.......-..+ ..++| +|+..
T Consensus 154 g~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~v 233 (343)
T KOG1371|consen 154 GKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIV 233 (343)
T ss_pred hhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCee
Confidence 999999999965544444333 344333332111 1111111111111 11221 33455
Q ss_pred chHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 560 RNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
|++ ||+-|+++.++.++.+. ..++||++++...+..+++..+.+.+|.+.+..-++. .
T Consensus 234 rdy-----------------i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~-R 295 (343)
T KOG1371|consen 234 RDY-----------------IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR-R 295 (343)
T ss_pred ecc-----------------eeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC-C
Confidence 666 99999999999999866 3469999999999999999999999998776654444 2
Q ss_pred hhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 636 QAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 636 ~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.++.. ....++++. +++|.+..++++++++..+|....
T Consensus 296 ~gdv~-----~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~n 335 (343)
T KOG1371|consen 296 NGDVA-----FVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQN 335 (343)
T ss_pred CCCce-----eeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcC
Confidence 22221 233356666 778888999999999999887764
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=272.42 Aligned_cols=270 Identities=14% Similarity=0.115 Sum_probs=191.1
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeEeee--------------eccCCChhHHHHHHHh-------cCCCeEEEcceecCC
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAFEFG--------------TGRLEDKNSLLDDMKR-------VRPTHVLNAAGITGR 432 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v~~~--------------~~d~~d~~~~~~~~~~-------~~~d~Vih~a~~~~~ 432 (684)
|||||||||||++|+++|+++|+++..+ ..|+.|....+.+++. .++|+||||||..+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~ 81 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST 81 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC
Confidence 7999999999999999999999964222 2344443332222221 157999999996521
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
....+...++.|+.++.+|+++|++.++++||+||..||+.....+ ..|+++.. |.+.|+.+|..+|+
T Consensus 82 -----~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 82 -----TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDF------IEEREYEK-PLNVYGYSKFLFDE 149 (308)
T ss_pred -----cCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCC------CccCCCCC-CCCHHHHHHHHHHH
Confidence 1224456899999999999999999999999999999998654333 66777776 88999999999998
Q ss_pred hhhHH--hhhhhhhhhhhhhhhHHHHHH---------hhhhhhcccccccee-cCCCCCchHHHHhhhcccccccCCCcc
Q 035631 513 LSYLE--IFVLVICIECLINFQVEGLLK---------AYENVCTLRLRMPIS-SDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 513 ~~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
+.... ..+.++.+.|+.++++++... .+...+..+..+.++ |++...|+| +
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~-----------------i 212 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDF-----------------V 212 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeee-----------------e
Confidence 85443 345677778887777654211 111222222223333 455667788 9
Q ss_pred chhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCc-ccccCCchhHhhhhhccCCCCCcCCchhh-hhcC
Q 035631 581 VLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQ-LKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEF 658 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~ 658 (684)
|++|+|++++.++++..+|+||+++++.+|+.|+++.+.+.+|.. ....+.+.. . ...... ...+|++|+ +.+|
T Consensus 213 ~v~D~a~a~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~-~~~~~~-~~~~d~~k~~~~g~ 288 (308)
T PRK11150 213 YVGDVAAVNLWFWENGVSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDK--L-KGRYQA-FTQADLTKLRAAGY 288 (308)
T ss_pred eHHHHHHHHHHHHhcCCCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccc--c-ccccce-ecccCHHHHHhcCC
Confidence 999999999999987767899999999999999999999998742 111111110 0 001112 456899999 6677
Q ss_pred CCc-hhHHHHHHHHHhhcc
Q 035631 659 PEV-LSIKDSIIKYVLEPN 676 (684)
Q Consensus 659 ~~~-~~~~~~l~~~~~~~~ 676 (684)
.+. .+|+++|+++++++.
T Consensus 289 ~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 289 DKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred CCCCCCHHHHHHHHHHHhh
Confidence 654 699999999998864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=271.68 Aligned_cols=274 Identities=17% Similarity=0.139 Sum_probs=206.3
Q ss_pred EEEcCCcchhHHHHHHHHhcCCeEe----eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhch
Q 035631 375 LIYGKTGWIGGLLGKYCKDKGIAFE----FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNV 450 (684)
Q Consensus 375 lItG~~G~iG~~l~~~L~~~g~~v~----~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv 450 (684)
||||||||||++|+++|+++|++|. ...+|++|.+.+.++++..++|+|||||+..+ ....+..++..++++|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~~~~~~~n~ 78 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVG--GIHANMTYPADFIRENL 78 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeec--ccchhhhCcHHHHHHHh
Confidence 6999999999999999999999863 45689999999999999888999999999752 11223456778999999
Q ss_pred hhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC----CCCCCCC-hhhhhhHhHhhhh--hHHhhhhh
Q 035631 451 MGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD----EPNFTRS-FYSKTKAMVTFLS--YLEIFVLV 522 (684)
Q Consensus 451 ~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~----~~~~p~~-~Y~~sK~~~E~~~--~~~~~~~~ 522 (684)
.++.+|+++|++.++ ++|++||+.||++....+ ++|++ +.. |.+ .|+.+|.++|++. +....+.+
T Consensus 79 ~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~------~~E~~~~~~~~~-p~~~~Y~~sK~~~e~~~~~~~~~~~~~ 151 (306)
T PLN02725 79 QIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQP------IPETALLTGPPE-PTNEWYAIAKIAGIKMCQAYRIQYGWD 151 (306)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCC------CCHHHhccCCCC-CCcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999987 699999999998655445 67765 333 544 5999999999874 33445667
Q ss_pred hhhhhhhhhhHHHHH---------Hhhhhh----hccccccce-ecCCCCCchHHHHhhhcccccccCCCccchhhHHHH
Q 035631 523 ICIECLINFQVEGLL---------KAYENV----CTLRLRMPI-SSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588 (684)
Q Consensus 523 ~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~ 588 (684)
+++.|+..+++.+.. +.+... ...+.++.+ +|++.+.++| +|++|++++
T Consensus 152 ~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~-----------------i~v~Dv~~~ 214 (306)
T PLN02725 152 AISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREF-----------------LHVDDLADA 214 (306)
T ss_pred EEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecc-----------------ccHHHHHHH
Confidence 777887777665421 111111 112223333 5777778888 999999999
Q ss_pred HHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHH
Q 035631 589 AIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKD 666 (684)
Q Consensus 589 ~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~ 666 (684)
++.++++. ..+.||+++++.+|+.|+++.+.+.++.+..+...... ........+|++|+ .++|.+..++++
T Consensus 215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~d~~k~~~lg~~p~~~~~~ 288 (306)
T PLN02725 215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSK------PDGTPRKLMDSSKLRSLGWDPKFSLKD 288 (306)
T ss_pred HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCC------CCcccccccCHHHHHHhCCCCCCCHHH
Confidence 99999865 45789999999999999999999999864433221111 00112457899999 777888889999
Q ss_pred HHHHHHhhcccccc
Q 035631 667 SIIKYVLEPNKKKN 680 (684)
Q Consensus 667 ~l~~~~~~~~~~~~ 680 (684)
+|++++++++++.+
T Consensus 289 ~l~~~~~~~~~~~~ 302 (306)
T PLN02725 289 GLQETYKWYLENYE 302 (306)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999988776543
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=274.66 Aligned_cols=283 Identities=16% Similarity=0.152 Sum_probs=209.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe-E------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA-F------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~-v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|||||||||||||++|+++|+++|++ | .++.+|++|.+++.++++...+|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 69999999999999999999999864 2 2357899999999999987778999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc---------CC-eEEEEecceeeecCCC-CC---CCCCCCCcc
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK---------NV-LLMNFATGCIYEYDSM-HP---QGSSIGFKE 492 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~-~~i~~SS~~vy~~~~~-~~---~~~~~~~~e 492 (684)
|+.. .......++..++++|+.++.+++++|+++ ++ ++|++||.++|+.... .. .....+++|
T Consensus 81 A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 81 AAES---HVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred Cccc---CCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 9965 233334567889999999999999999874 33 6999999999985321 00 001123788
Q ss_pred CCCCCCCCChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHH
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+++.. |.+.|+.||..+|.+.. ....+.++.+.|+..+++++. ...+...+..+..++++|++++.|+|
T Consensus 158 ~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 233 (352)
T PRK10084 158 TTAYA-PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW--- 233 (352)
T ss_pred cCCCC-CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEee---
Confidence 88887 99999999999998853 344566777777776665442 22222333333345677888888999
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCccccc-CCchhHhhh---hh
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWS-NFNLEEQAK---VL 640 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~---~~ 640 (684)
+|++|+|+++..++++. .+++||+++++.+|+.|+++.+++.+|...... +.. ..... ..
T Consensus 234 --------------v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~-~~~~~~~~~~ 298 (352)
T PRK10084 234 --------------LYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYR-EQITYVADRP 298 (352)
T ss_pred --------------EEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchh-hhccccccCC
Confidence 99999999999999876 467999999999999999999999998532110 100 00000 00
Q ss_pred ccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 641 VAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 641 ~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.... ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 299 ~~~~-~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~ 336 (352)
T PRK10084 299 GHDR-RYAIDASKISRELGWKPQETFESGIRKTVEWYLA 336 (352)
T ss_pred CCCc-eeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHh
Confidence 1112 456899999 35788888999999998876554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=293.41 Aligned_cols=285 Identities=15% Similarity=0.135 Sum_probs=209.4
Q ss_pred cccccCCceEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------eeeeccCCChhH-HHHHHHhcCCCe
Q 035631 364 YEICGRSRLKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------EFGTGRLEDKNS-LLDDMKRVRPTH 422 (684)
Q Consensus 364 ~~~~~~~~m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~d~~d~~~-~~~~~~~~~~d~ 422 (684)
..|+-..+|+|||||||||||++|+++|+++ ||+| +++.+|++|.+. +.++++++ |+
T Consensus 308 ~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~--D~ 385 (660)
T PRK08125 308 PACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKC--DV 385 (660)
T ss_pred chhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCC--CE
Confidence 4455566789999999999999999999986 6766 456788888655 56677765 99
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCC------
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP------ 496 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~------ 496 (684)
||||||..+ ......++...+++|+.++.+++++|++.+.++||+||++|||.....+ ++|+++.
T Consensus 386 ViHlAa~~~---~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~------~~E~~~~~~~~p~ 456 (660)
T PRK08125 386 VLPLVAIAT---PIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKY------FDEDTSNLIVGPI 456 (660)
T ss_pred EEECccccC---chhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCC------cCccccccccCCC
Confidence 999999762 2223456778899999999999999999987899999999998644334 5666532
Q ss_pred CCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-------------HHhhhhhhccccccceecCCCCCch
Q 035631 497 NFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-------------LKAYENVCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~ 561 (684)
..|.+.||.||.++|+++.. ...+.++.+.|+.++++++. ...+...+..+.++.+.|++.+.|+
T Consensus 457 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd 536 (660)
T PRK08125 457 NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRC 536 (660)
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeec
Confidence 12567899999999998544 44567888888887776542 1222233333445667788889999
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC-cccHHHHHHHHHhhcCCcccccCCchhH-
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG-VISHNEILELYKEYIDPQLKWSNFNLEE- 635 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~- 635 (684)
| +|++|+|++++.++++. .+++||+++++ .+|++|+++.+.+.+|.......++...
T Consensus 537 ~-----------------i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~ 599 (660)
T PRK08125 537 F-----------------TDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAG 599 (660)
T ss_pred e-----------------eeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccc
Confidence 9 99999999999999864 24589999985 7999999999999998532111111110
Q ss_pred h-h--------hhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 636 Q-A--------KVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 636 ~-~--------~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
. . ....... ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 600 ~~~~~~~~~~~~~~~~~~-~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~ 651 (660)
T PRK08125 600 FRVVESSSYYGKGYQDVE-HRKPSIRNARRLLDWEPKIDMQETIDETLDFFLR 651 (660)
T ss_pred cccccccccccccccccc-ccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHh
Confidence 0 0 0001112 446799999 45888889999999999987664
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=249.26 Aligned_cols=277 Identities=18% Similarity=0.130 Sum_probs=199.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+.+.||||||||+||||++|++.|+++ |++|+... .|+.+.+.+...+...++|
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~------------------------~~~~~~~~v~~~l~~~~~D 59 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGS------------------------GRLENRASLEADIDAVKPT 59 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEec------------------------CccCCHHHHHHHHHhcCCC
Confidence 345689999999999999999999999 78886532 2344556666666556899
Q ss_pred EEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC---CCCCCCCCCC-CC
Q 035631 89 TIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES---DIGNPEASQL-LP 161 (684)
Q Consensus 89 ~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~---~~~~~e~~~~-~p 161 (684)
+|||+|+..... .+..++...+++|+.++.+|+++|++.+ ++ ++++||.++|+.....+ ..+.+|.+++ .|
T Consensus 60 ~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~ 137 (298)
T PLN02778 60 HVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT 137 (298)
T ss_pred EEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC
Confidence 999999987532 2446888999999999999999999987 64 67778888987543211 1123444444 45
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
.+.|+.+|.++|.+++.+++ ..++|++.++|++.. ....++..+..+.++...+ .+|+|++|+++++
T Consensus 138 ~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~---~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al 204 (298)
T PLN02778 138 GSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS---NPRNFITKITRYEKVVNIP-----NSMTILDELLPIS 204 (298)
T ss_pred CCchHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc---cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHH
Confidence 58999999999999988753 578899888886531 2234566777776654432 3799999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCC-cceeeccC---CCCCCcceecCHHHHHh-cCCcccCCHHH
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE-KTIHYVQD---RPFNDHRYFLDDQKLKR-LGWKEKTPWEE 316 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~-~~~~~~~~---~~~~~~~~~~d~~k~~~-lg~~p~~~~~e 316 (684)
+.++++.. +++||+++++.+|++|+++.+.+.++.+.. ..+...+. .........+|++|+++ ++-.+. ..++
T Consensus 205 ~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~ 282 (298)
T PLN02778 205 IEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKES 282 (298)
T ss_pred HHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHH
Confidence 99997654 469999999999999999999999985421 11111111 11122233699999998 555443 5678
Q ss_pred HHHHHHHHHHhC
Q 035631 317 GLKLTLEWYKKN 328 (684)
Q Consensus 317 ~i~~~i~~~~~~ 328 (684)
+++..++-++..
T Consensus 283 ~~~~~~~~~~~~ 294 (298)
T PLN02778 283 LIKYVFEPNKKT 294 (298)
T ss_pred HHHHHHHHHHhh
Confidence 888777776543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-29 Score=275.15 Aligned_cols=256 Identities=19% Similarity=0.201 Sum_probs=195.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|+|||||||||+++++.|+++ |++|++++|+... . ...+++++.+|+.|.+.+..++ .++|+|||
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~----~-----~~~~v~~v~gDL~D~~~l~~al--~~vD~VVH 67 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPD----S-----WPSSADFIAADIRDATAVESAM--TGADVVAH 67 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchh----h-----cccCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 58999999999999999999999 8999999986311 0 1235789999999999999888 68999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+.... .+++|+.++.+++++|++.+ +++||++||.. |.++
T Consensus 68 lAa~~~~---------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------K~aa 109 (854)
T PRK05865 68 CAWVRGR---------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------QPRV 109 (854)
T ss_pred CCCcccc---------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------HHHH
Confidence 9985431 46889999999999999987 89999999842 7888
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~ 251 (684)
|+++. +++++++++||+++|||+. ..++..+.. .++...+++...++|+|++|+|+++..+++.+ ..+
T Consensus 110 E~ll~----~~gl~~vILRp~~VYGP~~------~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~g 178 (854)
T PRK05865 110 EQMLA----DCGLEWVAVRCALIFGRNV------DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDS 178 (854)
T ss_pred HHHHH----HcCCCEEEEEeceEeCCCh------HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCC
Confidence 88774 3589999999999999963 122322221 22222344566789999999999999998654 356
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCC-CCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKL-EPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~-~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
++||+++++.+|+.|+++.+.+.... ..+....... ..........+|++|+++ |||+|+++++++|+++++||+.
T Consensus 179 gvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ 258 (854)
T PRK05865 179 GPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRG 258 (854)
T ss_pred CeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 79999999999999999998875321 1000000000 001111234689999988 9999999999999999999998
Q ss_pred CCC
Q 035631 328 NPH 330 (684)
Q Consensus 328 ~~~ 330 (684)
+..
T Consensus 259 ri~ 261 (854)
T PRK05865 259 RIG 261 (854)
T ss_pred hcc
Confidence 754
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=291.38 Aligned_cols=278 Identities=16% Similarity=0.155 Sum_probs=213.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhc--CCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDK--GIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~--g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
.|+|||||||||||++|+++|+++ |++| .++.+|++|.+.+..++...++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 369999999999999999999988 4443 34567899988888777656789999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
|||+.. ..+.+..++..++++|+.++.+|+++|++.+ + ++||+||+.|||.....+ ..+..|+++.. |.+.
T Consensus 86 HlAa~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~---~~~~~E~~~~~-p~~~ 158 (668)
T PLN02260 86 HFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA---DVGNHEASQLL-PTNP 158 (668)
T ss_pred ECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc---ccCccccCCCC-CCCC
Confidence 999976 3343445677889999999999999999986 4 699999999998654322 01135667776 8899
Q ss_pred hhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHHhhhccccccc
Q 035631 503 YSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 503 Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
|+.+|..+|.+... ...+.++.+.|+.++++.+. .+.+......+.+++++|++.+.|+|
T Consensus 159 Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~------------- 225 (668)
T PLN02260 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSY------------- 225 (668)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEee-------------
Confidence 99999999988543 34567778888887876552 23333334444557778888889999
Q ss_pred CCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCccc--ccCCchhHhhhhhccCCCCCcCCch
Q 035631 576 PNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLK--WSNFNLEEQAKVLVAPRSNNHMDVT 652 (684)
Q Consensus 576 ~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~ 652 (684)
+|++|+|+++..++++. .+++||+++++.+|+.|+++.+++.+|.+.. +...+.. + .... ...+|++
T Consensus 226 ----ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~--p---~~~~-~~~~d~~ 295 (668)
T PLN02260 226 ----LYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENR--P---FNDQ-RYFLDDQ 295 (668)
T ss_pred ----EEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCC--C---CCcc-eeecCHH
Confidence 99999999999999876 5679999999999999999999999985422 1111110 0 1112 4568999
Q ss_pred hh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 653 KL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 653 kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
|+ +++|.+..+|+++|+++++++.+.
T Consensus 296 k~~~lGw~p~~~~~egl~~~i~w~~~~ 322 (668)
T PLN02260 296 KLKKLGWQERTSWEEGLKKTMEWYTSN 322 (668)
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 99 778888899999999999887654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=265.92 Aligned_cols=282 Identities=21% Similarity=0.228 Sum_probs=209.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------eeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------FGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
.|+||||||+||||+++++.|+++|++|. ++.+|++|.+.+.+++++.++|+|||+|
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 36999999999999999999999999871 4667999999999999988899999999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
+.. ....+..++...+++|+.++.+++++|++.+ + ++|++||+.+|+..... .+++|+++.. |.++|+.
T Consensus 84 ~~~---~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~-----~~~~e~~~~~-p~~~Y~~ 154 (349)
T TIGR02622 84 AQP---LVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWV-----WGYRETDPLG-GHDPYSS 154 (349)
T ss_pred ccc---ccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCC-----CCCccCCCCC-CCCcchh
Confidence 955 3344556788899999999999999999876 4 69999999999853221 1267877777 8999999
Q ss_pred hhHhHhhhhhH--Hhh-------hhhhhhhhhhhhhHHH------HHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 506 TKAMVTFLSYL--EIF-------VLVICIECLINFQVEG------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 506 sK~~~E~~~~~--~~~-------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
+|.++|.+... ... +.++.+.|+.++++++ +.+.+...+..+..+ ..+++.+.|+|
T Consensus 155 sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~-------- 225 (349)
T TIGR02622 155 SKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPW-------- 225 (349)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccce--------
Confidence 99999988533 222 5667778887777653 123333333333333 34677888899
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC------ccceeEecCC--CcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN------CRGAWNFTNP--GVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLV 641 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~------~~g~~ni~~~--~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~ 641 (684)
+|++|+|++++.++++. .+++||++++ +++|+.|+++.+.+.++. +..+..... +....
T Consensus 226 ---------i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~ 293 (349)
T TIGR02622 226 ---------QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD---LNHPH 293 (349)
T ss_pred ---------eeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC---CCCCc
Confidence 99999999999887642 2579999975 699999999999887653 222211000 00111
Q ss_pred cCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc-ccCCC
Q 035631 642 APRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK-KNNDM 683 (684)
Q Consensus 642 ~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 683 (684)
... ...+|++|+ .++|.+..+++++++++++++... .+.||
T Consensus 294 ~~~-~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~~~~ 337 (349)
T TIGR02622 294 EAR-LLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWLRGEDM 337 (349)
T ss_pred ccc-eeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCCh
Confidence 122 567899999 368989999999999999887753 44443
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=249.29 Aligned_cols=281 Identities=15% Similarity=0.105 Sum_probs=200.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc-CCCC-CCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN-LHPS-RASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|||||||||||++++++|+++ |++|+++.|+........ +... ....+++++.+|+.|.+.+.+++ .++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l--~~~d~ 81 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL--KGCSG 81 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH--cCCCE
Confidence 478999999999999999999999 899999998532211100 1111 11246889999999999999988 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCC--CCCCCCCCCCCCCCCC------
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGET--DMESDIGNPEASQLLP------ 161 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~--~~~~~~~~~e~~~~~p------ 161 (684)
|+|+++..... .......+++|+.++.+++++|.+...++|||++||.++++.. ........+|+++..+
T Consensus 82 v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 159 (297)
T PLN02583 82 LFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKF 159 (297)
T ss_pred EEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhc
Confidence 99987654321 1245678999999999999999886447899999998775321 1111122345433221
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
...|+.+|.++|+.++.++++++++++++||++||||+..... + ...+. .....+ ..++|+|++|+|+++
T Consensus 160 ~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--~-----~~~~~-~~~~~~--~~~~~v~V~Dva~a~ 229 (297)
T PLN02583 160 KLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--P-----YLKGA-AQMYEN--GVLVTVDVNFLVDAH 229 (297)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--h-----hhcCC-cccCcc--cCcceEEHHHHHHHH
Confidence 2379999999999999998878999999999999999763221 1 11221 122222 346899999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcc
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKE 310 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p 310 (684)
+.+++.+..++.|+++++....+.++++.+.+.++.-+.. ... .+.........++++|+++||++.
T Consensus 230 ~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~-~~~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 230 IRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSP-PPY-EMQGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred HHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCC-Ccc-cccCCCccccccChHHHHHhCccc
Confidence 9999987777789999777667789999999988643211 110 111112245678999999999863
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=228.17 Aligned_cols=280 Identities=17% Similarity=0.148 Sum_probs=219.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCe------EeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhh
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIA------FEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVE 444 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~------v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 444 (684)
+|||||||++|.+|++|++.+.++|.+ +....+|+++.++.+.+|+..+|.+|||+|++.| ..-....++.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVG--Glf~N~~ynld 78 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVG--GLFHNNTYNLD 78 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhc--chhhcCCCchH
Confidence 369999999999999999999999872 2446689999999999999999999999999985 44555688899
Q ss_pred HhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC-hhhhhhHhHhhh--hhHHhhh
Q 035631 445 TIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS-FYSKTKAMVTFL--SYLEIFV 520 (684)
Q Consensus 445 ~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~-~Y~~sK~~~E~~--~~~~~~~ 520 (684)
+++.|+....|+|..|.+.|+ |++++-|+|+|.+....|++|. .--+.|+. |.+ .|++.|+++... .|+.+++
T Consensus 79 F~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEt--mvh~gpph-psN~gYsyAKr~idv~n~aY~~qhg 155 (315)
T KOG1431|consen 79 FIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDET--MVHNGPPH-PSNFGYSYAKRMIDVQNQAYRQQHG 155 (315)
T ss_pred HHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHH--HhccCCCC-CCchHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998 5999999999998888883332 12234555 555 499999888855 6778888
Q ss_pred hhhhhhhhhhhhHHH---------HHHhhhhhh----cccc-ccceecCCCCCchHHHHhhhcccccccCCCccchhhHH
Q 035631 521 LVICIECLINFQVEG---------LLKAYENVC----TLRL-RMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEML 586 (684)
Q Consensus 521 ~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~ 586 (684)
.......+.+++++. .++.+...+ ..+. .+.+||+|...|+| +|++|+|
T Consensus 156 ~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF-----------------iys~DLA 218 (315)
T KOG1431|consen 156 RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF-----------------IYSDDLA 218 (315)
T ss_pred CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH-----------------hhHhHHH
Confidence 777777777776433 344443332 3333 47899999999999 9999999
Q ss_pred HHHHHHHhcCc-cceeEecCCC--cccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCC-Cc
Q 035631 587 PIAIEMARRNC-RGAWNFTNPG--VISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFP-EV 661 (684)
Q Consensus 587 ~~~~~~~~~~~-~g~~ni~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~-~~ 661 (684)
+++++++.+.. -...+++.++ .+|++|+++++.++++...++......... .....+|++|| .+++. .+
T Consensus 219 ~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DG------q~kKtasnsKL~sl~pd~~f 292 (315)
T KOG1431|consen 219 DLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDG------QFKKTASNSKLRSLLPDFKF 292 (315)
T ss_pred HHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCC------CcccccchHHHHHhCCCccc
Confidence 99999998763 3478888877 899999999999999977666543332111 12457899999 55555 57
Q ss_pred hhHHHHHHHHHhhcccc
Q 035631 662 LSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 662 ~~~~~~l~~~~~~~~~~ 678 (684)
++++++|.+.+++..+.
T Consensus 293 t~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 293 TPLEQAISETVQWYLDN 309 (315)
T ss_pred ChHHHHHHHHHHHHHHh
Confidence 77999999999887654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=264.02 Aligned_cols=276 Identities=16% Similarity=0.109 Sum_probs=203.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe----------------------------eeeccCCChhHHHHHHHhcCCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE----------------------------FGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~----------------------------~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
+++|||||||||||++|+++|+++|++|. ++.+|++|.+.+..+++..++|+
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~ 84 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA 84 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence 35899999999999999999999998763 34568899999999888777899
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|||+|+... ......++...+++|+.++.+++++|++.++ ++|++||+.+|+.....+ ++|+++.. |.+
T Consensus 85 vih~a~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~------~~E~~~~~-~~~ 154 (352)
T PLN02240 85 VIHFAGLKA---VGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVP------CTEEFPLS-ATN 154 (352)
T ss_pred EEEccccCC---ccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC------CCCCCCCC-CCC
Confidence 999999652 2223456778999999999999999999886 699999999998554444 88888887 889
Q ss_pred hhhhhhHhHhhhhhHHh---hhhhhhhhhhhhhhHHHH---------------HHhhhhhhcccc-ccceec------CC
Q 035631 502 FYSKTKAMVTFLSYLEI---FVLVICIECLINFQVEGL---------------LKAYENVCTLRL-RMPISS------DL 556 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~---~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-~~~~~g------~~ 556 (684)
.|+.+|..+|.+..... .+..+.+.|+.++++.+. .+.+........ .+.++| ++
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 234 (352)
T PLN02240 155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG 234 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence 99999999998854322 234455566554443211 111111111111 133443 56
Q ss_pred CCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-----c-cceeEecCCCcccHHHHHHHHHhhcCCcccccC
Q 035631 557 SNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-----C-RGAWNFTNPGVISHNEILELYKEYIDPQLKWSN 630 (684)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-----~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~ 630 (684)
.+.|+| +|++|+|++++.++++. . +++||+++++++|++|+++.+.+.+|.+..+..
T Consensus 235 ~~~~~~-----------------i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~ 297 (352)
T PLN02240 235 TGVRDY-----------------IHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKL 297 (352)
T ss_pred CEEEee-----------------EEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCcee
Confidence 677788 99999999999888632 2 369999999999999999999999986544432
Q ss_pred CchhHhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 631 FNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
.+.. ..... ...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 298 ~~~~-----~~~~~-~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~ 342 (352)
T PLN02240 298 APRR-----PGDAE-EVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342 (352)
T ss_pred CCCC-----CCChh-hhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 2211 01112 445789999 4588888899999999999887653
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=263.60 Aligned_cols=264 Identities=23% Similarity=0.234 Sum_probs=198.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccc-----cCCCC----------------CCCCCceE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLK-----NLHPS----------------RASPNFKF 67 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~-----~l~~~----------------~~~~~~~~ 67 (684)
..+++|||||||||||++|++.|++.++. .+|+++.|........ .+... ...+++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 45789999999999999999999986434 4789999975422211 11000 01257899
Q ss_pred EEecCC-------CHHHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc
Q 035631 68 LKGDIT-------CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE 140 (684)
Q Consensus 68 ~~~Dl~-------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~ 140 (684)
+.+|+. +.+.+..++ .++|+|||+|+..... .++....++|+.++.+|+++|++.+.+++|||+||++
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~--~~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMW--KEIDIVVNLAATTNFD---ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred EecccCCcCCCCChHHHHHHHH--hCCCEEEECccccCCc---CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 999998 444456666 5899999999987643 5678899999999999999999875589999999999
Q ss_pred cccCCCCCC-CCCCC--C--------------------------------------------C-CCCCCCChhHHHHHHH
Q 035631 141 VYGETDMES-DIGNP--E--------------------------------------------A-SQLLPTNPYSATKAGA 172 (684)
Q Consensus 141 vyg~~~~~~-~~~~~--e--------------------------------------------~-~~~~p~~~Y~~sK~~~ 172 (684)
+||...... ..+.. + . ....+.+.|+.||+++
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 998744210 00000 0 0 0122457899999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-C------hHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHH
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-K------LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
|.+++++.. +++++++||++|||+...+. . ....++..+..+....+++++++.+|++|++|++++++.++
T Consensus 244 E~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 244 EMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 999988753 89999999999999976442 1 22344554566666677899999999999999999999998
Q ss_pred hcC----CCCcEEEecCC--CccCHHHHHHHHHHHhCCCCC
Q 035631 246 HRG----VIGHVYNVGTK--KERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 246 ~~~----~~~~~~ni~~~--~~~t~~e~~~~i~~~~g~~~~ 280 (684)
... ..+++||++++ .++|+.|+++.+.+.++..|.
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 752 23579999998 899999999999998876553
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=250.56 Aligned_cols=281 Identities=21% Similarity=0.203 Sum_probs=196.9
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFA 94 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 94 (684)
|||||||||||+++++.|+++ |++|++++|+..... .+. . .. ..|+.. ..+...+ .++|+|||+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~~~----~--~~--~~~~~~-~~~~~~~--~~~D~Vvh~a 65 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGA--NTK----W--EG--YKPWAP-LAESEAL--EGADAVINLA 65 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCC--ccc----c--ee--eecccc-cchhhhc--CCCCEEEECC
Confidence 699999999999999999999 899999999753211 100 0 01 112222 2333444 6899999999
Q ss_pred ccCCcCCCC--CChHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 95 AQTHVDNSF--GNSFEFTNNNIYGTHVLLEACKLTGQ-VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 95 ~~~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
+.......+ ..+...++.|+.++.+++++|++.+. ..+||++||..+||.....+ .+|+.+..+.+.|+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~---~~E~~~~~~~~~~~~~~~~ 142 (292)
T TIGR01777 66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV---FTEEDSPAGDDFLAELCRD 142 (292)
T ss_pred CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC---cCcccCCCCCChHHHHHHH
Confidence 975432222 24456778999999999999999872 24677778888898654332 3555555566677777777
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCC
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 251 (684)
.|..+... .+.+++++++||+.+||++. ...+.+.......... .++++++.++|+|++|+|+++..+++++...
T Consensus 143 ~e~~~~~~-~~~~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~ 217 (292)
T TIGR01777 143 WEEAAQAA-EDLGTRVVLLRTGIVLGPKG---GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIEDLVQLILFALENASIS 217 (292)
T ss_pred HHHHhhhc-hhcCCceEEEeeeeEECCCc---chhHHHHHHHhcCccc-ccCCCCcccccEeHHHHHHHHHHHhcCcccC
Confidence 77776544 44589999999999999964 2344444333222211 2467888999999999999999999876667
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc------CCC-CCCcceecCHHHHHhcCCcccCC-HHHHH
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ------DRP-FNDHRYFLDDQKLKRLGWKEKTP-WEEGL 318 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~------~~~-~~~~~~~~d~~k~~~lg~~p~~~-~~e~i 318 (684)
++||+++++++|+.|+++.+.+.+|.+....+.... ..+ ........+++|++++||+|.++ ++|++
T Consensus 218 g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 218 GPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred CceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 799999999999999999999999865322111100 000 01123456789999999999984 88763
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=259.91 Aligned_cols=276 Identities=16% Similarity=0.136 Sum_probs=202.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|||||||||||||++|+++|+++|++|. ++.+|++|.+.+..+++..++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 6999999999999999999999998773 345788899999888887678999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
|+.. ........+...+++|+.++.+++++|++.++ ++|++||+++|+.....+ ++|+++...|.+.|+.
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~------~~E~~~~~~p~~~Y~~ 151 (338)
T PRK10675 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIP------YVESFPTGTPQSPYGK 151 (338)
T ss_pred Cccc---cccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCc------cccccCCCCCCChhHH
Confidence 9865 22222345678899999999999999999887 599999999998554444 7888876338899999
Q ss_pred hhHhHhhhhhHHh---hhhhhhhhhhhhhhHHH---------------HHHhhhhhhcccc-ccceec------CCCCCc
Q 035631 506 TKAMVTFLSYLEI---FVLVICIECLINFQVEG---------------LLKAYENVCTLRL-RMPISS------DLSNPR 560 (684)
Q Consensus 506 sK~~~E~~~~~~~---~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~~~~g------~~~~~~ 560 (684)
+|..+|++..... .+.++.+.|+.++++.. +...+........ .+.++| ++.+.+
T Consensus 152 sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 231 (338)
T PRK10675 152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231 (338)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEE
Confidence 9999998855432 23455566655444321 1111111111111 123333 455667
Q ss_pred hHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh
Q 035631 561 NFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ 636 (684)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 636 (684)
+| +|++|++++++.+++.. . +++||+++++.+|+.|+++.+.+.+|.+..+...+..
T Consensus 232 ~~-----------------v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-- 292 (338)
T PRK10675 232 DY-----------------IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRR-- 292 (338)
T ss_pred ee-----------------EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCC--
Confidence 77 99999999999998752 2 3599999999999999999999999975444322211
Q ss_pred hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 637 AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 637 ~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
..... ...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 293 ---~~~~~-~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~~ 333 (338)
T PRK10675 293 ---EGDLP-AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_pred ---CCchh-hhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhhh
Confidence 01112 456799999 5588889999999999999887653
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=256.50 Aligned_cols=276 Identities=18% Similarity=0.188 Sum_probs=209.0
Q ss_pred EEEEEcCCcchhHHHHHHHHhcC--CeEe------------------------eeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKG--IAFE------------------------FGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g--~~v~------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
+|||||||||||++|+++|+++| ++|. ++.+|++|.+++.+++++.++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 5442 455789999999999998778999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc--CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK--NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
|+.. ..+.+...+..++++|+.++.+++++|.+. ++++|++||..|||...... +++|.++.. |.+.|+
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~-----~~~e~~~~~-~~~~Y~ 151 (317)
T TIGR01181 81 AAES---HVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD-----AFTETTPLA-PSSPYS 151 (317)
T ss_pred cccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC-----CcCCCCCCC-CCCchH
Confidence 9965 233345567788999999999999999986 45899999999998644321 277888777 889999
Q ss_pred hhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 505 KTKAMVTFLSYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 505 ~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
.+|..+|.+... ...+.++.+.|+..+++.+ ..+.+......+..+++++++.+.++|
T Consensus 152 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--------------- 216 (317)
T TIGR01181 152 ASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDW--------------- 216 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEee---------------
Confidence 999999988543 3445677777777666543 223333333444456677888888889
Q ss_pred CccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--
Q 035631 578 SMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-- 654 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-- 654 (684)
+|++|+|+++..++++. .+++||+++++.+|+.|+++.+.+.+|.+......... ...... ...+|++|+
T Consensus 217 --i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~k~~~ 289 (317)
T TIGR01181 217 --LYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVED----RPGHDR-RYAIDASKIKR 289 (317)
T ss_pred --EEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCC----Cccchh-hhcCCHHHHHH
Confidence 99999999999999876 45699999999999999999999999854222111100 000111 335789999
Q ss_pred hhcCCCchhHHHHHHHHHhhccccc
Q 035631 655 KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 655 ~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
.++|.+..+|+++++++++++.+..
T Consensus 290 ~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 290 ELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 4577777899999999998875543
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=258.03 Aligned_cols=265 Identities=11% Similarity=0.110 Sum_probs=191.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
+|+||||||+||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+|||
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vih 87 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC--DGVFH 87 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC--CEEEE
Confidence 4689999999999999999999999876 23557889999999999876 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecc-eeeecCCCCCCCCCCCCccCC------CCC
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATG-CIYEYDSMHPQGSSIGFKEDD------EPN 497 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~-~vy~~~~~~~~~~~~~~~e~~------~~~ 497 (684)
+|+.. ..++...+++|+.++.+++++|++.++ ++|++||+ .+||.....+ ..+++|++ +..
T Consensus 88 ~A~~~--------~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~---~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 88 TASPV--------TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDP---EAVVDESCWSDLDFCKN 156 (342)
T ss_pred ecCCC--------CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCC---CcccCcccCCChhhccc
Confidence 99954 245678899999999999999999887 69999996 5897433211 01255654 333
Q ss_pred CCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHhh-------hhhhccccccceecCCCCCchHHHHhhh
Q 035631 498 FTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKAY-------ENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
|.+.|+.||.++|.+.+. ...+.++.+.|+.+++|++..... .... .+. ...++ ...|+|
T Consensus 157 -p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~-~g~-~~~~~--~~~~~~------ 225 (342)
T PLN02214 157 -TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYL-TGS-AKTYA--NLTQAY------ 225 (342)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHH-cCC-cccCC--CCCcCe------
Confidence 778999999999998654 344677788888877766532110 0100 000 11112 234566
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNN 647 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 647 (684)
||++|+|++++.+++++ .+|.||+++ +.++++|+++.+.+.++.. .++. ... ........ ..
T Consensus 226 -----------i~V~Dva~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~-~~~~-~~~--~~~~~~~~-~~ 288 (342)
T PLN02214 226 -----------VDVRDVALAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY-PLPT-KCK--DEKNPRAK-PY 288 (342)
T ss_pred -----------eEHHHHHHHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC-CCCC-CCc--cccCCCCC-cc
Confidence 99999999999999876 567999987 5789999999999998631 1111 000 00011112 44
Q ss_pred cCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 648 HMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 648 ~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.+|++|+ +++|.+ .+++++|+++++++.+
T Consensus 289 ~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~ 318 (342)
T PLN02214 289 KFTNQKIKDLGLEF-TSTKQSLYDTVKSLQE 318 (342)
T ss_pred ccCcHHHHHcCCcc-cCHHHHHHHHHHHHHH
Confidence 6899999 777876 6999999999988764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=256.15 Aligned_cols=271 Identities=15% Similarity=0.152 Sum_probs=194.9
Q ss_pred EEEEcCCcchhHHHHHHHHhcCC-eEee-----------------eeccCCChhHHHHHHHh--cCCCeEEEcceecCCC
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGI-AFEF-----------------GTGRLEDKNSLLDDMKR--VRPTHVLNAAGITGRP 433 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~-~v~~-----------------~~~d~~d~~~~~~~~~~--~~~d~Vih~a~~~~~~ 433 (684)
|||||||||||++++++|.++|+ +|.. +..|+++.+.++.+.+. .++|+|||+|+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~--- 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS--- 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc---
Confidence 69999999999999999999997 5521 23456666666555441 4679999999964
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
. ....++...+++|+.++.+++++|.+.++++|++||+.||+... .+ ++|++++..|.+.|+.+|..+|.+
T Consensus 78 ~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~~------~~e~~~~~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 78 D--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-AG------FREGRELERPLNVYGYSKFLFDQY 148 (314)
T ss_pred C--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-CC------cccccCcCCCCCHHHHHHHHHHHH
Confidence 2 23456778899999999999999999888999999999998543 23 566665434888999999999988
Q ss_pred hhHH--h--hhhhhhhhhhhhhhHHHHH---------Hhhhhhhccccccce------ecCCCCCchHHHHhhhcccccc
Q 035631 514 SYLE--I--FVLVICIECLINFQVEGLL---------KAYENVCTLRLRMPI------SSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 514 ~~~~--~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
.... . ....+.+.|+..+++++.. ..+...+.....+.+ ++++.+.|+|
T Consensus 149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------------ 216 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF------------ 216 (314)
T ss_pred HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee------------
Confidence 5432 2 2345666777766655421 111122222222333 2456677788
Q ss_pred cCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh
Q 035631 575 IPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL 654 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl 654 (684)
+|++|++++++.++++...++||+++++++|+.|+++.+.+.+|.+.....++..+.. .........+|++|+
T Consensus 217 -----i~v~D~a~~i~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~ 289 (314)
T TIGR02197 217 -----VYVKDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEAL--RGKYQYFTQADITKL 289 (314)
T ss_pred -----EEHHHHHHHHHHHHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCcccc--ccccccccccchHHH
Confidence 9999999999999987666799999999999999999999999965432222221110 001112457899999
Q ss_pred --hhcCCCchhHHHHHHHHHhhc
Q 035631 655 --KKEFPEVLSIKDSIIKYVLEP 675 (684)
Q Consensus 655 --~~~~~~~~~~~~~l~~~~~~~ 675 (684)
..+|.+..+++++|+++++++
T Consensus 290 ~~~l~~~p~~~l~~~l~~~~~~~ 312 (314)
T TIGR02197 290 RAAGYYGPFTTLEEGVKDYVQWL 312 (314)
T ss_pred HHhcCCCCcccHHHHHHHHHHHH
Confidence 335778999999999999875
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=248.73 Aligned_cols=272 Identities=17% Similarity=0.181 Sum_probs=201.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||+|++++++|+++ |++|++++|+... ...+ ...+++++.+|+.|.+.+..++ .++|+|||
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~--~~~l----~~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi~ 70 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRK--ASFL----KEWGAELVYGDLSLPETLPPSF--KGVTAIID 70 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHH--hhhH----hhcCCEEEECCCCCHHHHHHHH--CCCCEEEE
Confidence 58999999999999999999999 8999999997421 1111 1247899999999999999998 78999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+++.. +.++....++|+.++.+++++|++++ ++||||+||..... .+..+|..+|..+
T Consensus 71 ~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~----------------~~~~~~~~~K~~~ 128 (317)
T CHL00194 71 ASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ----------------YPYIPLMKLKSDI 128 (317)
T ss_pred CCCCC-----CCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc----------------cCCChHHHHHHHH
Confidence 98643 23344577889999999999999988 99999999854311 1124589999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~ 251 (684)
|+.++ +.+++++++||+.+|+.. +..+......+.++.+ .++.+.++|+|++|+|+++..+++++ ..+
T Consensus 129 e~~l~----~~~l~~tilRp~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~ 197 (317)
T CHL00194 129 EQKLK----KSGIPYTIFRLAGFFQGL------ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKN 197 (317)
T ss_pred HHHHH----HcCCCeEEEeecHHhhhh------hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccC
Confidence 98875 358999999999888631 1122222223444444 44566789999999999999999764 357
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec----------------cCCCC---------CCcceecCHHHHHh-
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV----------------QDRPF---------NDHRYFLDDQKLKR- 305 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~----------------~~~~~---------~~~~~~~d~~k~~~- 305 (684)
++||+++++.+|+.|+++.+.+.+|.+........ ...+. .......+.+++++
T Consensus 198 ~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T CHL00194 198 KTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKI 277 (317)
T ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHH
Confidence 89999999999999999999999997543111000 00000 01122345667776
Q ss_pred cCCccc--CCHHHHHHHHHHHHHh
Q 035631 306 LGWKEK--TPWEEGLKLTLEWYKK 327 (684)
Q Consensus 306 lg~~p~--~~~~e~i~~~i~~~~~ 327 (684)
||+.|. .++++++++.+.....
T Consensus 278 ~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 278 FKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred hCCChhhhhhHHHHHHHHHHHHHH
Confidence 999984 5799999888866544
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=229.20 Aligned_cols=279 Identities=22% Similarity=0.261 Sum_probs=225.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------------eeeeccCCChhHHHHHHHhcCCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------------EFGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
+++.||||.||+-|++|++.|+++|+.| .+..+|++|...+.++++.++||-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 3478999999999999999999999976 578899999999999999999999
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC---CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN---VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
|+||||.+ .+..+.+.|..+.+++..|+.+||++.+..+ +||...||+..||.-.+.| .+|++|.. |
T Consensus 82 IYNLaAQS---~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~p------q~E~TPFy-P 151 (345)
T COG1089 82 IYNLAAQS---HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIP------QKETTPFY-P 151 (345)
T ss_pred heeccccc---cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCc------cccCCCCC-C
Confidence 99999965 8888999999999999999999999999864 5799999999999777777 88999988 9
Q ss_pred CChhhhhhHhHhhh--hhHHhhhhhhhhhhhhhhhH----HH-----HHHhhhhhhccccc-cceecCCCCCchHHHHhh
Q 035631 500 RSFYSKTKAMVTFL--SYLEIFVLVICIECLINFQV----EG-----LLKAYENVCTLRLR-MPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~--~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~ 567 (684)
+|+|+.+|+.+-.+ .|++.+++-++.-++.+.-. +. +...+.+. ..+.. -...|+.+..|||
T Consensus 152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~I-k~G~q~~l~lGNldAkRDW----- 225 (345)
T COG1089 152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARI-KLGLQDKLYLGNLDAKRDW----- 225 (345)
T ss_pred CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHH-HccccceEEeccccccccc-----
Confidence 99999999999876 68888888888777766632 22 23332222 22222 3455889999999
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH------------
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE------------ 635 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------ 635 (684)
-|..|.++++..+++++.+..|++++|+..|++|+++...+..|.++.|..-...+
T Consensus 226 ------------G~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V 293 (345)
T COG1089 226 ------------GHAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIV 293 (345)
T ss_pred ------------cchHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeE
Confidence 99999999999999999889999999999999999999999999777764211111
Q ss_pred -hhhhhccCC--CCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 636 -QAKVLVAPR--SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 636 -~~~~~~~~~--~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
..+...||. -...-|++|+ +++|.+..++++-+++|++.-.+
T Consensus 294 ~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~ 340 (345)
T COG1089 294 EIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLE 340 (345)
T ss_pred EECccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence 111112222 1234589999 77899999999999999875443
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=237.11 Aligned_cols=280 Identities=16% Similarity=0.157 Sum_probs=194.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
++|+|+||||+||||+||++.|+++||.| ..+.+|+.|.++++.+++++ |.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc--dgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC--DGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC--CEE
Confidence 45799999999999999999999999987 67889999999999999999 999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecC-CCCCCCCCCCCccCCCCC---
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYD-SMHPQGSSIGFKEDDEPN--- 497 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~-~~~~~~~~~~~~e~~~~~--- 497 (684)
||+|.+. ..+. ........+.++.||.|+|++|++.. + |+|++||...-... ++ ..+...++|+...+
T Consensus 83 fH~Asp~---~~~~-~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~--~~~~~vvdE~~wsd~~~ 156 (327)
T KOG1502|consen 83 FHTASPV---DFDL-EDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPN--IGENSVVDEESWSDLDF 156 (327)
T ss_pred EEeCccC---CCCC-CCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcC--CCCCcccccccCCcHHH
Confidence 9999966 2222 22344899999999999999999988 5 69999999743322 22 22233366666543
Q ss_pred --CCCChhhhhhHhHhhhhhHHhh--hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc-
Q 035631 498 --FTRSFYSKTKAMVTFLSYLEIF--VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV- 572 (684)
Q Consensus 498 --~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 572 (684)
.-...|..||.+||+.+|.... +..+....+.++.|+.+.+...... ..+.+++.+...
T Consensus 157 ~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~----------------~~~l~~i~G~~~~ 220 (327)
T KOG1502|consen 157 CRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSL----------------NALLKLIKGLAET 220 (327)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhH----------------HHHHHHHhccccc
Confidence 0235799999999999766544 4455555555554444333211110 111122222111
Q ss_pred -cccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCC
Q 035631 573 -VNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMD 650 (684)
Q Consensus 573 -~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 650 (684)
.+....++||+|+|+|++.+++++ ..|.|.+.+. ..++.|+++.+.+.+.... ++........... ....++
T Consensus 221 ~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~-~~~~~ei~~~l~~~~P~~~----ip~~~~~~~~~~~-~~~~~~ 294 (327)
T KOG1502|consen 221 YPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGE-VVSIKEIADILRELFPDYP----IPKKNAEEHEGFL-TSFKVS 294 (327)
T ss_pred CCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecC-cccHHHHHHHHHHhCCCCC----CCCCCCccccccc-cccccc
Confidence 111114599999999999999998 6789998775 5569999999998875321 1111111000100 123679
Q ss_pred chhh-hhcCCCchhHHHHHHHHHhhccccc
Q 035631 651 VTKL-KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 651 ~~kl-~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
++|+ .+++..+.+|++++.++++.+.++.
T Consensus 295 ~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 295 SEKLKSLGGFKFRPLEETLSDTVESLREKG 324 (327)
T ss_pred cHHHHhcccceecChHHHHHHHHHHHHHhc
Confidence 9999 6666799999999999999887653
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=236.15 Aligned_cols=239 Identities=28% Similarity=0.367 Sum_probs=184.8
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCC----CCCCce----EEEecCCCHHHHHHhhccCC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR----ASPNFK----FLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~----~~~~~~----~~~~Dl~d~~~~~~~~~~~~ 86 (684)
||||||+|.||+.||++|++.++ .++++++|++. .+..+.... ..+++. .+.+|++|.+.+..+++..+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~--~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~ 77 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDEN--KLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYK 77 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HH--HHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChh--HHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcC
Confidence 79999999999999999999853 68999999753 222211111 123443 35789999999999997779
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
||+|||+|+.-+.+..+.+|.++.++|+.|++|++++|.+++ +++||++||..+ .+|.+.||
T Consensus 78 pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA-----------------v~PtnvmG 139 (293)
T PF02719_consen 78 PDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA-----------------VNPTNVMG 139 (293)
T ss_dssp -SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-----------------SS--SHHH
T ss_pred CCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc-----------------CCCCcHHH
Confidence 999999999999999999999999999999999999999998 999999999543 45789999
Q ss_pred HHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 243 (684)
+||..+|.++..++... +..++++|+|+|.|... ++++.|.+++.+++|+.+ .+++..|-|+.+++.++.++.
T Consensus 140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G---SVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~ 215 (293)
T PF02719_consen 140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG---SVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQ 215 (293)
T ss_dssp HHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT---SCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC---cHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHH
Confidence 99999999999887654 57899999999999864 799999999999999998 667788999999999999999
Q ss_pred HHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCC
Q 035631 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLE 278 (684)
Q Consensus 244 ~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~ 278 (684)
+......+++|..--|+++++.|+++.+.+..|..
T Consensus 216 a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 216 AAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHHH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred HHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 99888889999999999999999999999999864
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=249.52 Aligned_cols=277 Identities=19% Similarity=0.185 Sum_probs=203.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|+||||||+||||++|+++|+++||+| .++.+|++|.+.....++... |+|||+|+....+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVP-DAVIHLAAQSSVPD 79 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCC-CEEEEccccCchhh
Confidence 469999999999999999999999987 235678888877777777665 99999999773222
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccC-CCCCCCCChhhhhhHhHhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKED-DEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~-~~~~~p~~~Y~~sK~~~E~ 512 (684)
.... ++..++++|+.++.+++++|++.++ ++||.||.++|+..... .+++|+ .++. |.++||.+|+++|.
T Consensus 80 ~~~~--~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~-----~~~~E~~~~~~-p~~~Yg~sK~~~E~ 151 (314)
T COG0451 80 SNAS--DPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPP-----LPIDEDLGPPR-PLNPYGVSKLAAEQ 151 (314)
T ss_pred hhhh--CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCC-----CCcccccCCCC-CCCHHHHHHHHHHH
Confidence 1111 4667999999999999999999776 58997777877754111 127777 5666 88899999999999
Q ss_pred hhhHHh--hhhhhhhhhhhhhhHHHHHHh-----h---hhhhccccc-cceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 513 LSYLEI--FVLVICIECLINFQVEGLLKA-----Y---ENVCTLRLR-MPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 513 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
++.... .+.++.+.|+..+++++.... . ......+.+ +...+++...|+| +|
T Consensus 152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------i~ 214 (314)
T COG0451 152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDF-----------------VY 214 (314)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEee-----------------Ee
Confidence 855444 467888888887776653222 1 111333443 3444666777788 99
Q ss_pred hhhHHHHHHHHHhcCccceeEecCCC-cccHHHHHHHHHhhcCCccc-ccCCchhHhhhhhccCCCCCcCCchhh--hhc
Q 035631 582 LDEMLPIAIEMARRNCRGAWNFTNPG-VISHNEILELYKEYIDPQLK-WSNFNLEEQAKVLVAPRSNNHMDVTKL--KKE 657 (684)
Q Consensus 582 v~D~~~~~~~~~~~~~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~ 657 (684)
++|++++++.++++...+.||+++++ ..+++|+++.+.+.+|.... +...+. ....... ....+|++|. .++
T Consensus 215 v~D~a~~~~~~~~~~~~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~lg 290 (314)
T COG0451 215 VDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL---GRRGDLR-EGKLLDISKARAALG 290 (314)
T ss_pred HHHHHHHHHHHHhCCCCcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC---CCCCccc-ccccCCHHHHHHHhC
Confidence 99999999999998744499999997 89999999999999997544 222211 0011111 2567889888 556
Q ss_pred CCCchhHHHHHHHHHhhcccc
Q 035631 658 FPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 658 ~~~~~~~~~~l~~~~~~~~~~ 678 (684)
|.+..++++++.++++++...
T Consensus 291 ~~p~~~~~~~i~~~~~~~~~~ 311 (314)
T COG0451 291 WEPKVSLEEGLADTLEWLLKK 311 (314)
T ss_pred CCCCCCHHHHHHHHHHHHHHh
Confidence 777789999999998876543
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-27 Score=238.28 Aligned_cols=247 Identities=26% Similarity=0.335 Sum_probs=215.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
..+|+||||||+|-||+.+|+++++.+ --+++.++|++..-.. ..+........+.++-+|+.|.+.+..+++..++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~-p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFN-PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcC-CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 357999999999999999999999985 3588999997532211 1112222246788899999999999999987889
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|+|+|+.-+.+.++.+|.+..++|+.||.|++++|.+++ +++||++||.. ..+|.|.||.
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDK-----------------AV~PtNvmGa 388 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDK-----------------AVNPTNVMGA 388 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCc-----------------ccCCchHhhH
Confidence 99999999999999999999999999999999999999998 99999999943 3578899999
Q ss_pred HHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHH
Q 035631 168 TKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
+|..+|..+..+..+. +..++.+|+|+|.|... +++|-|.+++.+|+|+.+ .+++-.|-|..+.|.++.++.+
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG---SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA 464 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQA 464 (588)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC---CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHH
Confidence 9999999999887643 37899999999999864 899999999999999998 7778889999999999999999
Q ss_pred HhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 245 ~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
......|++|-+--|+++++.|+++.+.+.+|..+
T Consensus 465 ~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~ 499 (588)
T COG1086 465 GAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTP 499 (588)
T ss_pred HhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCC
Confidence 99888899999999999999999999999998443
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=250.49 Aligned_cols=274 Identities=14% Similarity=0.108 Sum_probs=189.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|+||||||+||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGC--DLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcC--CEEE
Confidence 45699999999999999999999999876 23467888999998888876 9999
Q ss_pred EcceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCC----CCCCCCCCCCc---cCC
Q 035631 425 NAAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDS----MHPQGSSIGFK---EDD 494 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~----~~~~~~~~~~~---e~~ 494 (684)
|+|+.. . ....++ ..++++|+.++.+++++|.+. ++ ++||+||.++|+... ..+..|..+-. .+.
T Consensus 86 h~A~~~---~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T PLN00198 86 HVATPV---N--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS 160 (338)
T ss_pred EeCCCC---c--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh
Confidence 999954 1 112233 356799999999999999886 35 699999999998532 12212211100 001
Q ss_pred CCCCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHhhhhh------hccccccceec-CCCC----Cch
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKAYENV------CTLRLRMPISS-DLSN----PRN 561 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g-~~~~----~~~ 561 (684)
+.. |.++|+.||.++|.+++. ..++.++.+.|+.+++|++....+... +..+..+.+.| ++.+ .|+
T Consensus 161 ~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 161 EKP-PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred cCC-ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcc
Confidence 233 778999999999988543 445677778888877766532111111 11111222333 1211 256
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhh
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKV 639 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~ 639 (684)
| +|++|+|++++.++++. ..|.|+ +++..+|+.|+++.+.+.++. +.... + ...+
T Consensus 240 ~-----------------i~V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~-~--~~~~-- 296 (338)
T PLN00198 240 I-----------------THVEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQVPTD-F--GDFP-- 296 (338)
T ss_pred e-----------------eEHHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCCCCcc-c--cccC--
Confidence 6 99999999999999876 456885 566789999999999988753 22111 1 0000
Q ss_pred hccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 640 LVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 640 ~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
. .. ...+|++|+ +++|.+..+++++|+++++++++
T Consensus 297 -~-~~-~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~ 332 (338)
T PLN00198 297 -S-KA-KLIISSEKLISEGFSFEYGIEEIYDQTVEYFKA 332 (338)
T ss_pred -C-CC-ccccChHHHHhCCceecCcHHHHHHHHHHHHHH
Confidence 0 12 456799999 67888999999999999988664
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=247.33 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=192.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
|+||||||+||||++|+++|+++|++| .++.+|++|.+.+.+++++. |+|||
T Consensus 6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vih 83 (325)
T PLN02989 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGC--ETVFH 83 (325)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCC--CEEEE
Confidence 599999999999999999999999876 23457899999998888865 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC----
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT---- 499 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p---- 499 (684)
+||.. ........+...+++|+.++.+++++|.+. +. ++|++||..+|++.... .....+++|+++.. |
T Consensus 84 ~A~~~---~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~-~~~~~~~~E~~~~~-p~~~~ 158 (325)
T PLN02989 84 TASPV---AITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETK-LGPNDVVDETFFTN-PSFAE 158 (325)
T ss_pred eCCCC---CCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCcc-CCCCCccCcCCCCc-hhHhc
Confidence 99965 223334556788999999999999999885 44 69999999887643211 01122367777665 4
Q ss_pred --CChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc
Q 035631 500 --RSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 500 --~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
.+.|+.+|..+|.+++. ...+.++.+.|+.++++++..+.. .. ...++..++.++.....
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~-~~---------------~~~~i~~~~~~~~~~~~ 222 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL-NF---------------SVAVIVELMKGKNPFNT 222 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC-Cc---------------hHHHHHHHHcCCCCCCC
Confidence 36899999999988543 444667777888877665422110 00 00111122211111110
Q ss_pred -CCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchh
Q 035631 576 -PNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 576 -~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
..+++|++|+|++++.+++++ .+|.||++ ++.+|++|+++.+.+.++.. .... ...+.. ..... ...+|++|
T Consensus 223 ~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~-~~~~~~--~~~~~-~~~~~~~k 296 (325)
T PLN02989 223 THHRFVDVRDVALAHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIAD-RNEDIT--ELNSV-TFNVCLDK 296 (325)
T ss_pred cCcCeeEHHHHHHHHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCC-CCCCcc--ccccc-CcCCCHHH
Confidence 124499999999999999876 46799995 56899999999999998732 1110 000000 00112 45789999
Q ss_pred h-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 654 L-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 654 l-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
+ +++|.+..+++++|+++++++.++
T Consensus 297 ~~~lg~~p~~~l~~gi~~~~~~~~~~ 322 (325)
T PLN02989 297 VKSLGIIEFTPTETSLRDTVLSLKEK 322 (325)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 9 778889999999999999987644
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=251.18 Aligned_cols=280 Identities=13% Similarity=0.097 Sum_probs=187.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
..|+||||||+||||++++++|+++|++| .++.+|++|.+.+.+++.+. |+|||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vih~ 86 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGC--DGVFHV 86 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCC--CEEEEC
Confidence 45799999999999999999999999876 25668899999998888765 999999
Q ss_pred ceecCCCCccccccchhhHh-----hhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCCCCCCCCCCCccCCC----
Q 035631 427 AGITGRPNVDWCESHRVETI-----RTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE---- 495 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~-----~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~---- 495 (684)
|+.... .......++..++ ++|+.++.+++++|++.+ + ++|++||+++||...... ....+++|+.+
T Consensus 87 A~~~~~-~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~-~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 87 AASMEF-DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNG-RWRAVVDETCQTPID 164 (353)
T ss_pred CccccC-CccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCC-CCCCccCcccCCcHH
Confidence 997621 1111233444444 445699999999999875 5 699999999998532110 00012445421
Q ss_pred ----CCCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHhhhhhhcccc------c--cceecCC---CC
Q 035631 496 ----PNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKAYENVCTLRL------R--MPISSDL---SN 558 (684)
Q Consensus 496 ----~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~g~~---~~ 558 (684)
+..|.++||.||.++|++++. ...+.++.+.|+.++++++....+...+.... . .+..+.. ..
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 244 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMG 244 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccC
Confidence 111446899999999998544 44567778888887776653222111110000 0 1111110 11
Q ss_pred CchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCc-ccccCCchhHh
Q 035631 559 PRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQ-LKWSNFNLEEQ 636 (684)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~ 636 (684)
.|+| ||++|+|++++.+++.+ ..+.|++ +++.+|++|+++.+.+.++.. ..+... ..
T Consensus 245 ~~df-----------------i~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~-~~-- 303 (353)
T PLN02896 245 SIAL-----------------VHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLD-EE-- 303 (353)
T ss_pred ceeE-----------------EeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccccc-cc--
Confidence 2456 99999999999999866 4568865 667899999999999988732 111111 10
Q ss_pred hhhhccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 637 AKVLVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 637 ~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.... . ...+|++++ +++|.+..+++++|+++++++.++
T Consensus 304 -~~~~--~-~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~ 342 (353)
T PLN02896 304 -KRGS--I-PSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDH 342 (353)
T ss_pred -ccCc--c-ccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHC
Confidence 0111 1 235688888 778888889999999999887654
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=239.71 Aligned_cols=228 Identities=17% Similarity=0.151 Sum_probs=175.5
Q ss_pred EEEcCCcchhHHHHHHHHhcC--CeE---------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 375 LIYGKTGWIGGLLGKYCKDKG--IAF---------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 375 lItG~~G~iG~~l~~~L~~~g--~~v---------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
|||||+||||++|+++|+++| ++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~--d~V~H~Aa~~- 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGV--DVVFHTAAPV- 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCC--ceEEEeCccc-
Confidence 699999999999999999999 444 37899999999999999999 9999999965
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCC-CCCCCCCCCCccCCCCC-CCCChhhhhhH
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDS-MHPQGSSIGFKEDDEPN-FTRSFYSKTKA 508 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~-~~~~~~~~~~~e~~~~~-~p~~~Y~~sK~ 508 (684)
. .+.....+.++++||.||++|+++|++.+++ +||+||.+|+++.. ..+..+ .+|..+.. .+.+.|+.||+
T Consensus 78 --~-~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~---~dE~~~~~~~~~~~Y~~SK~ 151 (280)
T PF01073_consen 78 --P-PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIIN---GDEDTPYPSSPLDPYAESKA 151 (280)
T ss_pred --c-ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCccc---CCcCCcccccccCchHHHHH
Confidence 1 1224567789999999999999999999985 99999999987522 222111 23333321 25678999999
Q ss_pred hHhhhhhHHhh-------hhhhhhhhhhhhhHHHH---HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 509 MVTFLSYLEIF-------VLVICIECLINFQVEGL---LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 509 ~~E~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
+||++.+.... .+.+++.|+..++|++. .+.+......+......|++....+|
T Consensus 152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~---------------- 215 (280)
T PF01073_consen 152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDF---------------- 215 (280)
T ss_pred HHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECc----------------
Confidence 99998554332 35677788887777663 33444444444445566777777788
Q ss_pred ccchhhHHHHHHHHHhc---C------ccceeEecCCCccc-HHHHHHHHHhhcCCcccc
Q 035631 579 MTVLDEMLPIAIEMARR---N------CRGAWNFTNPGVIS-HNEILELYKEYIDPQLKW 628 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~---~------~~g~~ni~~~~~~s-~~e~~~~i~~~~g~~~~~ 628 (684)
+|++|+|.|++.++++ + .++.|++.+++++. +.|+...+.+.+|.+...
T Consensus 216 -vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 216 -VYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred -EeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 9999999999988652 1 34599999999999 999999999999975443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=249.17 Aligned_cols=268 Identities=15% Similarity=0.136 Sum_probs=186.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe--------------------------eeeccCCChhHHHHHHHhcCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------------------FGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
+++||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++ |+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGC--TGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCC--CEEE
Confidence 46999999999999999999999998762 3567899999999988876 9999
Q ss_pred EcceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCC-CCCCCCCCCccCCC-----
Q 035631 425 NAAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSM-HPQGSSIGFKEDDE----- 495 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~-~~~~~~~~~~e~~~----- 495 (684)
|+|+... ....++ ...+++|+.++.+++++|.+.+ + ++||+||.++|+.... .+. ++|++.
T Consensus 83 H~A~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~-----~~E~~~~~~~~ 152 (351)
T PLN02650 83 HVATPMD-----FESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPV-----YDEDCWSDLDF 152 (351)
T ss_pred EeCCCCC-----CCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCc-----cCcccCCchhh
Confidence 9998541 112233 4789999999999999999876 4 6999999987764321 120 233321
Q ss_pred ---CCCCCChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHHHHHhhhhhhc------cccccceecCCCCCchHHH
Q 035631 496 ---PNFTRSFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEGLLKAYENVCT------LRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 496 ---~~~p~~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~ 564 (684)
+..|.+.|+.||.++|.+++ ...++.++.+.|+.++++++........+. ... ...++. .+.|+|
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~r~~-- 228 (351)
T PLN02650 153 CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN-EAHYSI-IKQGQF-- 228 (351)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC-ccccCc-CCCcce--
Confidence 11145689999999998854 344567777888887776543211111000 000 011111 123566
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCccccc-CCchhHhhhhhcc
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWS-NFNLEEQAKVLVA 642 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~ 642 (684)
+|++|+|++++.+++++ ..|.| +++++.+|+.|+++.+.+.++.. .++ .+.. ....
T Consensus 229 ---------------v~V~Dva~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~-----~~~~ 286 (351)
T PLN02650 229 ---------------VHLDDLCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEY-NIPARFPG-----IDED 286 (351)
T ss_pred ---------------eeHHHHHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCccc-CCCCCCCC-----cCcc
Confidence 99999999999999876 45689 56668899999999999987631 111 1110 0011
Q ss_pred CCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 643 PRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 643 ~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.. ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 287 ~~-~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~ 321 (351)
T PLN02650 287 LK-SVEFSSKKLTDLGFTFKYSLEDMFDGAIETCRE 321 (351)
T ss_pred cc-cccCChHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 12 456789998 77888888999999999987654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=248.29 Aligned_cols=269 Identities=12% Similarity=0.083 Sum_probs=187.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
|+|||||||||||++|+++|+++|++| .++.+|++|.+.+..+++++ |+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGC--EGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCC--CEEEE
Confidence 589999999999999999999999876 23457888888898888876 99999
Q ss_pred cceecCCCCccccccchh-hHhhhchhhhHHHHHHHHHc-CC-eEEEEecce--eeecCCCCCCCCCCCCccCCCCCCC-
Q 035631 426 AAGITGRPNVDWCESHRV-ETIRTNVMGTLTLADVCKEK-NV-LLMNFATGC--IYEYDSMHPQGSSIGFKEDDEPNFT- 499 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~-~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~--vy~~~~~~~~~~~~~~~e~~~~~~p- 499 (684)
+|+... ....++. .++++|+.++.+++++|++. ++ ++||+||++ +|++.... +..+++|+.+.. |
T Consensus 83 ~A~~~~-----~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~---~~~~~~E~~~~~-p~ 153 (322)
T PLN02662 83 TASPFY-----HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLT---PDVVVDETWFSD-PA 153 (322)
T ss_pred eCCccc-----CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCC---CCCcCCcccCCC-hh
Confidence 999651 1223443 78899999999999999987 66 699999986 46532211 112367776554 4
Q ss_pred -----CChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHh---hhhhhcccc-ccceecCCCCCchHHHHhhh
Q 035631 500 -----RSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKA---YENVCTLRL-RMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 500 -----~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 568 (684)
.+.|+.+|.++|++.+. ...+.++.+.|+.++++++..+. ....+.... ..... +.+.++|
T Consensus 154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------ 225 (322)
T PLN02662 154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF--PNASYRW------ 225 (322)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC--CCCCcCe------
Confidence 36899999999988543 44567777788777665432110 000000000 00011 1233455
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNN 647 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 647 (684)
+|++|+|++++.+++++ ..|.||++ ++.+|++|+++.+.+.++.. ..+ .... ... .... ..
T Consensus 226 -----------i~v~Dva~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~-~~~-~~~~--~~~-~~~~-~~ 287 (322)
T PLN02662 226 -----------VDVRDVANAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL-QLP-EKCA--DDK-PYVP-TY 287 (322)
T ss_pred -----------EEHHHHHHHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC-CCC-CCCC--Ccc-cccc-cc
Confidence 99999999999999876 46789996 57899999999999987641 111 1000 000 1112 55
Q ss_pred cCCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 648 HMDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 648 ~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.+|++|+ +++|.+ .+++++|++++++++++
T Consensus 288 ~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~ 318 (322)
T PLN02662 288 QVSKEKAKSLGIEF-IPLEVSLKDTVESLKEK 318 (322)
T ss_pred ccChHHHHHhCCcc-ccHHHHHHHHHHHHHHc
Confidence 7899999 777864 78999999999988654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=240.20 Aligned_cols=270 Identities=14% Similarity=0.131 Sum_probs=185.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe--------------------------eeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------------------FGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
++||||||+||||++++++|+++|++|. ++.+|++|.+.+.++++++ |+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC--DAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC--CEEEE
Confidence 5899999999999999999999998762 2456888888898888876 99999
Q ss_pred cceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC-----
Q 035631 426 AAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN----- 497 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~----- 497 (684)
+|+.. . ....++ ...+++|+.++.+++++|++. ++ ++|++||+++|..... +..+..+++|+++..
T Consensus 84 ~A~~~---~--~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~-~~~~~~~~~E~~~~~p~~~~ 157 (322)
T PLN02986 84 TASPV---F--FTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQP-PIEANDVVDETFFSDPSLCR 157 (322)
T ss_pred eCCCc---C--CCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCc-cCCCCCCcCcccCCChHHhh
Confidence 99954 1 112233 357899999999999999985 55 6999999876531111 011112366665543
Q ss_pred CCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHh------hhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 498 FTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKA------YENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.|.+.|+.+|.++|.+++. +..+..+.+.|+.++++++..+. ....+..+.. .++ .+.++|
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~------- 226 (322)
T PLN02986 158 ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LFN--NRFYRF------- 226 (322)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CCC--CcCcce-------
Confidence 1457899999999988544 34466777777777765542211 0000001110 111 233455
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNH 648 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (684)
||++|+|++++.+++++ .+|.||++ ++.+|++|+++.+.+.++. ..+..... ... . ......
T Consensus 227 ----------v~v~Dva~a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~~~---~~~-~-~~~~~~ 289 (322)
T PLN02986 227 ----------VDVRDVALAHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCIADTNE---ESE-M-NEMICK 289 (322)
T ss_pred ----------eEHHHHHHHHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCCCc---ccc-c-cccCCc
Confidence 99999999999999876 45799995 5689999999999999873 22221100 001 1 111335
Q ss_pred CCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 649 MDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 649 ~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
+|++|+ +++|.+ .+++++|+++++++.++
T Consensus 290 ~d~~~~~~lg~~~-~~l~e~~~~~~~~~~~~ 319 (322)
T PLN02986 290 VCVEKVKNLGVEF-TPMKSSLRDTILSLKEK 319 (322)
T ss_pred cCHHHHHHcCCcc-cCHHHHHHHHHHHHHHc
Confidence 899999 767765 48999999999887653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=235.58 Aligned_cols=237 Identities=22% Similarity=0.257 Sum_probs=185.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccC-C-CCCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-H-PSRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
..+++|||||||||||+++++.|+++ |++|++++|+......... . .....++++++.+|+.|.+.+..++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 35689999999999999999999999 8999999997532110000 0 0011347899999999999999988533
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
++|+||||++.... .....+++|+.++.+++++|++.+ +++||++||.++|+ |...|
T Consensus 136 ~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~-----------------p~~~~ 192 (390)
T PLN02657 136 PVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK-----------------PLLEF 192 (390)
T ss_pred CCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC-----------------cchHH
Confidence 69999999885321 112456789999999999999987 89999999987753 23458
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE-ecccHHHHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR-SYLYCADVAEAFDVI 244 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~i~~~ 244 (684)
..+|...|..++. .+.+++++|+||+.+||+. ..++..+..++++.++++++..+ ++||++|+|+++..+
T Consensus 193 ~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~-------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~ 263 (390)
T PLN02657 193 QRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL-------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADC 263 (390)
T ss_pred HHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc-------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHH
Confidence 8999999998865 3468999999999999752 23345566788887888887654 679999999999999
Q ss_pred HhcC-CCCcEEEecCC-CccCHHHHHHHHHHHhCCCCC
Q 035631 245 LHRG-VIGHVYNVGTK-KERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 245 ~~~~-~~~~~~ni~~~-~~~t~~e~~~~i~~~~g~~~~ 280 (684)
+.++ ..+++||++++ +.+|+.|+++.+.+.+|.++.
T Consensus 264 ~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 264 VLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred HhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 8754 45789999985 689999999999999997543
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=237.72 Aligned_cols=273 Identities=18% Similarity=0.155 Sum_probs=199.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------eeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
||||||||||||++++++|+++|++|. ++.+|+++.+.+..+++..++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 689999999999999999999998762 456899999999999987778999999996
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.. ......++...++.|+.++.+++++|.+.++ ++|++||.++|+.....+ ++|+++.. |.+.|+.+|.
T Consensus 81 ~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~------~~e~~~~~-~~~~y~~sK~ 150 (328)
T TIGR01179 81 IA---VGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIP------ISEDSPLG-PINPYGRSKL 150 (328)
T ss_pred cC---cchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCC------ccccCCCC-CCCchHHHHH
Confidence 52 2223456677899999999999999999876 699999999998554444 78888887 8899999999
Q ss_pred hHhhhhhHH--h-hhhhhhhhhhhhhhHHHHH--------------Hhhhhhhc-ccccccee------cCCCCCchHHH
Q 035631 509 MVTFLSYLE--I-FVLVICIECLINFQVEGLL--------------KAYENVCT-LRLRMPIS------SDLSNPRNFVT 564 (684)
Q Consensus 509 ~~E~~~~~~--~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~~------g~~~~~~~~~~ 564 (684)
.+|.+.... . .+.++.+.|+.++++.... ..+..... ....+.++ +++...++|
T Consensus 151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 228 (328)
T TIGR01179 151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY-- 228 (328)
T ss_pred HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee--
Confidence 999875433 2 4567777777766554211 11111110 01111111 133344566
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL 640 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~ 640 (684)
||++|+++++..+++.. .+++||+++++++|++|+++.+++.+|.+..+...+...
T Consensus 229 ---------------v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~----- 288 (328)
T TIGR01179 229 ---------------IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRP----- 288 (328)
T ss_pred ---------------eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCC-----
Confidence 99999999999998742 457999999999999999999999999765443222110
Q ss_pred ccCCCCCcCCchhh--hhcCCCchh-HHHHHHHHHhhcccc
Q 035631 641 VAPRSNNHMDVTKL--KKEFPEVLS-IKDSIIKYVLEPNKK 678 (684)
Q Consensus 641 ~~~~~~~~~d~~kl--~~~~~~~~~-~~~~l~~~~~~~~~~ 678 (684)
.... ...+|++|+ .++|.+..+ ++++++++++++.++
T Consensus 289 ~~~~-~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 289 GDPA-SLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred cccc-chhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 0111 445789998 357776555 999999999877653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=207.14 Aligned_cols=284 Identities=20% Similarity=0.196 Sum_probs=202.1
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFA 94 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 94 (684)
|+|||||||||++|+..|.+. ||+|++++|++....... ...+. ..+.+.+... .++|+|||+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~------~~~v~-------~~~~~~~~~~-~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNL------HPNVT-------LWEGLADALT-LGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhc------Ccccc-------ccchhhhccc-CCCCEEEECC
Confidence 689999999999999999999 899999999863221110 11111 1233334431 2799999999
Q ss_pred ccCCcCC--CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 95 AQTHVDN--SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 95 ~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|..-... +.+..+...+..+..|..|.++..+.. +++.+|..|.+..||....... +|. .....+.-+.....
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~---tE~-~~~g~~Fla~lc~~ 140 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV---TEE-SPPGDDFLAQLCQD 140 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee---ecC-CCCCCChHHHHHHH
Confidence 9765443 334455678999999999999998543 3678888888888998865443 454 33344556666777
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCC
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 251 (684)
-|+..... +..+.+++++|.|.|.|+.. ..++.++...+-+---+ .|+|.++++|||++|++++|..+++++...
T Consensus 141 WE~~a~~a-~~~gtRvvllRtGvVLs~~G---GaL~~m~~~fk~glGG~-~GsGrQ~~SWIhieD~v~~I~fll~~~~ls 215 (297)
T COG1090 141 WEEEALQA-QQLGTRVVLLRTGVVLSPDG---GALGKMLPLFKLGLGGK-LGSGRQWFSWIHIEDLVNAILFLLENEQLS 215 (297)
T ss_pred HHHHHhhh-hhcCceEEEEEEEEEecCCC---cchhhhcchhhhccCCc-cCCCCceeeeeeHHHHHHHHHHHHhCcCCC
Confidence 77777554 44589999999999999754 34555544444333223 489999999999999999999999998888
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CC-CCcc-----eecCHHHHHhcCCcccC-CHHHHHHHHHH
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PF-NDHR-----YFLDDQKLKRLGWKEKT-PWEEGLKLTLE 323 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~-~~~~-----~~~d~~k~~~lg~~p~~-~~~e~i~~~i~ 323 (684)
+.||++++.+++..++.+.+.+.++++....++...-+ .+ .... ...-..|+.+.||+.++ ++++++.+.+.
T Consensus 216 Gp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 216 GPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred CcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 89999999999999999999999987654322211000 00 0111 12334566678998886 59999988764
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-27 Score=230.24 Aligned_cols=204 Identities=25% Similarity=0.280 Sum_probs=173.4
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|||||||||||++|+++|+++|+.| .++.+|+.|.+.+.++++...+|+|||+|+..+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~--- 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS--- 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS---
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecccc---
Confidence 7999999999999999999999975 467899999999999999999999999999641
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
.......+...++.|+.++.+++++|++.++ ++|++||+.+|+.....+ ++|+++.. |.+.|+.+|..+|++
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~------~~e~~~~~-~~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEP------IDEDSPIN-PLSPYGASKRAAEEL 150 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSS------BETTSGCC-HSSHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccc-ccccccccccccccc
Confidence 2223467889999999999999999999998 899999999999775555 89999886 999999999999988
Q ss_pred hhH--HhhhhhhhhhhhhhhhHHH--------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchh
Q 035631 514 SYL--EIFVLVICIECLINFQVEG--------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLD 583 (684)
Q Consensus 514 ~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 583 (684)
.+. +..+.++.+.|+.++++++ +...+...+..+.++.+++++.+.|+| +|++
T Consensus 151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------i~v~ 213 (236)
T PF01370_consen 151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDF-----------------IHVD 213 (236)
T ss_dssp HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEE-----------------EEHH
T ss_pred ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccce-----------------EEHH
Confidence 544 3446778888888777666 244555556666667888899999999 9999
Q ss_pred hHHHHHHHHHhcCc--cceeEec
Q 035631 584 EMLPIAIEMARRNC--RGAWNFT 604 (684)
Q Consensus 584 D~~~~~~~~~~~~~--~g~~ni~ 604 (684)
|+|++++.+++++. +++||++
T Consensus 214 D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 214 DLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp HHHHHHHHHHHHSCTTTEEEEES
T ss_pred HHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999999885 7799985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=230.92 Aligned_cols=269 Identities=16% Similarity=0.132 Sum_probs=192.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|+||||||+||||+++++.|+++|++| .++.+|+.|.+++.++++++ |+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--d~vi~~a~~~--- 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGC--RALFHVAADY--- 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCC--CEEEEeceec---
Confidence 589999999999999999999999876 35678999999999999876 9999999843
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecC-CCCCCCCCCCCccCCCCCCC---CChhhhhhH
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYD-SMHPQGSSIGFKEDDEPNFT---RSFYSKTKA 508 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~-~~~~~~~~~~~~e~~~~~~p---~~~Y~~sK~ 508 (684)
.....++...+++|+.++.+++++|.+.++ ++|++||+.+|+.. .+.+ ++|+++.. | .+.|+.+|.
T Consensus 76 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~------~~e~~~~~-~~~~~~~Y~~sK~ 146 (328)
T TIGR03466 76 --RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTP------ADETTPSS-LDDMIGHYKRSKF 146 (328)
T ss_pred --ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCC------cCccCCCC-cccccChHHHHHH
Confidence 122456778899999999999999999876 69999999999853 2233 77777655 4 457999999
Q ss_pred hHhhhhhHH--hhhhhhhhhhhhhhhHHHHH------HhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCcc
Q 035631 509 MVTFLSYLE--IFVLVICIECLINFQVEGLL------KAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 509 ~~E~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
++|++.... ..+.++++.|+.++++.+.. ..+...+.. +.+...+ ..++| +
T Consensus 147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~-----------------i 205 (328)
T TIGR03466 147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNG--KMPAYVD--TGLNL-----------------V 205 (328)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcC--CCceeeC--CCcce-----------------E
Confidence 999885443 33566677777766544311 011111111 1111111 12345 9
Q ss_pred chhhHHHHHHHHHhcCccc-eeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh----------hhh-hccC-----
Q 035631 581 VLDEMLPIAIEMARRNCRG-AWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ----------AKV-LVAP----- 643 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~~~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~-~~~~----- 643 (684)
|++|+|++++.++++...| .||++ ++.+|+.|+++.+.+.+|.+.....++..-. ... ...+
T Consensus 206 ~v~D~a~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (328)
T TIGR03466 206 HVDDVAEGHLLALERGRIGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVD 284 (328)
T ss_pred EHHHHHHHHHHHHhCCCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHH
Confidence 9999999999999877444 77775 6899999999999999997544443332110 000 0011
Q ss_pred -----CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 644 -----RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 644 -----~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.....+|++|+ .++|.+ .++++++++++++++.
T Consensus 285 ~~~~~~~~~~~d~~k~~~~lg~~p-~~~~~~i~~~~~~~~~ 324 (328)
T TIGR03466 285 GVRMAKKKMFFSSAKAVRELGYRQ-RPAREALRDAVEWFRA 324 (328)
T ss_pred HHHHHhccCCCChHHHHHHcCCCC-cCHHHHHHHHHHHHHH
Confidence 02557899999 457766 5999999999988754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=232.01 Aligned_cols=257 Identities=10% Similarity=0.050 Sum_probs=178.6
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------eeeccCCChhHHHHHHHhc
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------FGTGRLEDKNSLLDDMKRV 418 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~d~~d~~~~~~~~~~~ 418 (684)
.+++|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 34556999999999999999999999999762 2457899999999999887
Q ss_pred CCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-CC-eEEEEecc--eeeecC--CC--CCCCCCCCC
Q 035631 419 RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-NV-LLMNFATG--CIYEYD--SM--HPQGSSIGF 490 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~--~vy~~~--~~--~~~~~~~~~ 490 (684)
|.|||+|+... ............++|+.++.+++++|++. ++ |+||+||. .+|+.. .. .+..+..+.
T Consensus 130 --d~V~hlA~~~~---~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~ 204 (367)
T PLN02686 130 --AGVFHTSAFVD---PAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWS 204 (367)
T ss_pred --cEEEecCeeec---ccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCC
Confidence 99999999752 11111223456788999999999999986 56 59999996 478642 11 122232233
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHHHHh----hhhhhccccccceecCCCCCchHHH
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKA----YENVCTLRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~ 564 (684)
.|+.+.. |.+.|+.||+.+|.+++. ...+.++++.|+.++++++.... +...+ .+ .+.++|++. ++|
T Consensus 205 ~~~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~-~g-~~~~~g~g~--~~~-- 277 (367)
T PLN02686 205 DESFCRD-NKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYL-KG-AQEMLADGL--LAT-- 277 (367)
T ss_pred Chhhccc-ccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHh-cC-CCccCCCCC--cCe--
Confidence 3333444 778899999999998644 34467788888888777653211 11111 11 133445443 356
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL 640 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~ 640 (684)
+||+|+|++++.+++.. .++.| +++++.+|++|+++.+.+.+|.+......+... .
T Consensus 278 ---------------v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~ 337 (367)
T PLN02686 278 ---------------ADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSS----D 337 (367)
T ss_pred ---------------EEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhh----c
Confidence 99999999999999842 34588 888899999999999999998654432221110 1
Q ss_pred ccCCCCCcCCchhhhhc
Q 035631 641 VAPRSNNHMDVTKLKKE 657 (684)
Q Consensus 641 ~~~~~~~~~d~~kl~~~ 657 (684)
..+. ...+|++|++..
T Consensus 338 ~d~~-~~~~d~~kl~~~ 353 (367)
T PLN02686 338 DTPA-RFELSNKKLSRL 353 (367)
T ss_pred CCcc-cccccHHHHHHH
Confidence 1234 678899999443
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-24 Score=225.40 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=184.3
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccC---------CCCCC-CCCceEEEecCCCH------H
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNL---------HPSRA-SPNFKFLKGDITCA------D 76 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l---------~~~~~-~~~~~~~~~Dl~d~------~ 76 (684)
+|||||||||||+++++.|+++++.++|+++.|+..... ...+ ..... ..+++++.+|+.++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999944478999999753211 0010 00000 15789999998753 4
Q ss_pred HHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 77 LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 77 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.+..+. .++|+|||+|+..... .......+.|+.++.+++++|.+.+ +++|+|+||.++|+....... .+++.
T Consensus 81 ~~~~~~--~~~d~vih~a~~~~~~---~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~-~~~~~ 153 (367)
T TIGR01746 81 EWERLA--ENVDTIVHNGALVNWV---YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTV-TEDDA 153 (367)
T ss_pred HHHHHH--hhCCEEEeCCcEeccC---CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCc-ccccc
Confidence 455555 6899999999976532 3455677899999999999999976 788999999999986432211 11111
Q ss_pred ---CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 157 ---SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 157 ---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
....+.+.|+.+|+.+|.+++.+.+. +++++++||+.+||+... ...++..++.........+ ......+
T Consensus 154 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~ 230 (367)
T TIGR01746 154 IVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTE 230 (367)
T ss_pred ccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCcccc
Confidence 11234568999999999999887655 999999999999997332 1234444444443333222 1222357
Q ss_pred ecccHHHHHHHHHHHHhcCCC---CcEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 230 SYLYCADVAEAFDVILHRGVI---GHVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~---~~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
+++|++|+++++..++..+.. +++||+++++++++.|+++.+.+ .|.+.
T Consensus 231 ~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 231 DLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred CcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 899999999999999876543 68999999999999999999998 77653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=229.55 Aligned_cols=260 Identities=10% Similarity=0.050 Sum_probs=185.9
Q ss_pred cCCceEEEEE----cCCcchhHHHHHHHHhcCCeEeeeeccCC--------------------------ChhHHHHHHHh
Q 035631 368 GRSRLKFLIY----GKTGWIGGLLGKYCKDKGIAFEFGTGRLE--------------------------DKNSLLDDMKR 417 (684)
Q Consensus 368 ~~~~m~ilIt----G~~G~iG~~l~~~L~~~g~~v~~~~~d~~--------------------------d~~~~~~~~~~ 417 (684)
..++|+|||| |||||||++|+++|+++||+|..+..+.. |...+..++..
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~ 128 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAG 128 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhcc
Confidence 3455799999 99999999999999999998854443211 22234455544
Q ss_pred cCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 418 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
..+|+|||+++. +..++.+++++|++.++ ++||+||.+||+.....+ ..|+++.
T Consensus 129 ~~~d~Vi~~~~~-------------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p------~~E~~~~ 183 (378)
T PLN00016 129 AGFDVVYDNNGK-------------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPP------HVEGDAV 183 (378)
T ss_pred CCccEEEeCCCC-------------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCC------CCCCCcC
Confidence 467999998761 13467889999999998 699999999998654444 6777665
Q ss_pred CCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHH----HHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGL----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
. |.+ +|..+|.+.. ..+.++++.|+.++++++. ...+...+..+.++.+.|++.+.++|
T Consensus 184 ~-p~~----sK~~~E~~l~--~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~---------- 246 (378)
T PLN00016 184 K-PKA----GHLEVEAYLQ--KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQL---------- 246 (378)
T ss_pred C-Ccc----hHHHHHHHHH--HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeece----------
Confidence 5 544 8999987643 3356777788877765432 11222223334445566777777888
Q ss_pred cccCCCccchhhHHHHHHHHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhh--hh---hccCCC
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQA--KV---LVAPRS 645 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~---~~~~~~ 645 (684)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+..+...+..... .. ..+..
T Consensus 247 -------i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~- 318 (378)
T PLN00016 247 -------GHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQ- 318 (378)
T ss_pred -------ecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCcccccccccccc-
Confidence 99999999999999875 45799999999999999999999999976554433322110 00 01112
Q ss_pred CCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 646 NNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 646 ~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
...+|++|+ .++|.+..+++++|+++++++..
T Consensus 319 ~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~ 352 (378)
T PLN00016 319 HFFASPRKAKEELGWTPKFDLVEDLKDRYELYFG 352 (378)
T ss_pred ccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHh
Confidence 345799999 45788888999999999988664
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-23 Score=225.76 Aligned_cols=367 Identities=19% Similarity=0.186 Sum_probs=241.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.++++|||||++.||.++++.|+++ |++|++++|+.. ....+... ...++..+.+|+.+.+++..++.. .
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVE--RARERADS-LGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999 899999998642 22111111 123567789999999988777643 3
Q ss_pred CCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 86 ~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
++|++||+||.... ....++....+++|+.++..+++++... +.-.++|++||.......
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---------- 148 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---------- 148 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC----------
Confidence 69999999997321 2233456678899999999988887643 212489999996553221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH--HH-HHHHHcCCceEEecCCCceE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP--KF-ILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|+..+.+.+.++.+ .+++++.++|+.+-.+... .+.. .. ....... ++ ..
T Consensus 149 ----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~--~~~~~~~~~~~~~~~~--~~-------~~ 213 (520)
T PRK06484 149 ----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVA--ELERAGKLDPSAVRSR--IP-------LG 213 (520)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhh--hhcccchhhhHHHHhc--CC-------CC
Confidence 12356999999999998877665 3789999999988654211 0000 00 0000000 01 01
Q ss_pred ecccHHHHHHHHHHHHhcCC---CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhc
Q 035631 230 SYLYCADVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l 306 (684)
.+...+|+++++..++.... .+..+.+.++.. . ++..
T Consensus 214 ~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~-~-----------~~~~---------------------------- 253 (520)
T PRK06484 214 RLGRPEEIAEAVFFLASDQASYITGSTLVVDGGWT-V-----------YGGS---------------------------- 253 (520)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCceEEecCCee-c-----------cccc----------------------------
Confidence 23567888888887776432 233444332210 0 0000
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCCcccccccCCCCCCceeeccCCCCCCcccccccccccccCCceEEEEEcCCcchhHH
Q 035631 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYEICGRSRLKFLIYGKTGWIGGL 386 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ilItG~~G~iG~~ 386 (684)
+. + .+. +.+. ... ...+++|||||+|.||.+
T Consensus 254 ~~-~-~~~--------------------------~~~~------------~~~---------~~~k~~lItGas~gIG~~ 284 (520)
T PRK06484 254 GP-A-STA--------------------------QAPS------------PLA---------ESPRVVAITGGARGIGRA 284 (520)
T ss_pred cC-C-CCc--------------------------cCCC------------Ccc---------cCCCEEEEECCCcHHHHH
Confidence 00 0 000 0000 000 012489999999999999
Q ss_pred HHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC--CCCcccc
Q 035631 387 LGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG--RPNVDWC 438 (684)
Q Consensus 387 l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~--~~~~~~~ 438 (684)
++++|+++|++| ..+.+|++|.+++..+++.. ++|++||+||... .+..+..
T Consensus 285 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~ 364 (520)
T PRK06484 285 VADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQS 364 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCC
Confidence 999999999876 34678999999998887653 5899999999652 1112233
Q ss_pred ccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 439 ESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 439 ~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.+.....+++|+.++.++++++... +.++|++||...+.+ .. +...|+.+|...+.+.
T Consensus 365 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~-~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 365 AEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----------------LP-PRNAYCASKAAVTMLS 425 (520)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----------------CC-CCchhHHHHHHHHHHH
Confidence 4556788999999999999998763 347999999854421 11 3468999999998773
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=201.50 Aligned_cols=269 Identities=16% Similarity=0.156 Sum_probs=192.7
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeEeeeeccCC-----------ChhHHHHHHHhcCCCeEEEcceecCCCCccccccch
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE-----------DKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHR 442 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~-----------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 442 (684)
|+|||||||||++|+..|.+.||+|+.+..+.. ..+.+++.... ..|+||||||.+. ..-.|+.+.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~-~~DavINLAG~~I-~~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTL-GIDAVINLAGEPI-AERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccC-CCCEEEECCCCcc-ccccCCHHHH
Confidence 689999999999999999999999977776532 23444444442 3599999999872 2335889999
Q ss_pred hhHhhhchhhhHHHHHHHHHcCCe---EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh-hHHh
Q 035631 443 VETIRTNVMGTLTLADVCKEKNVL---LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS-YLEI 518 (684)
Q Consensus 443 ~~~~~~nv~~~~~ll~~~~~~~~~---~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~-~~~~ 518 (684)
+...++.+..|..|.++..+...+ +|..|..+.||...+.. ++|++++ ..++-+......|... ..+.
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~------~tE~~~~--g~~Fla~lc~~WE~~a~~a~~ 150 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRV------VTEESPP--GDDFLAQLCQDWEEEALQAQQ 150 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCcee------eecCCCC--CCChHHHHHHHHHHHHhhhhh
Confidence 999999999999999999976542 55555556798776666 8999654 4567777777787763 3344
Q ss_pred hhhhhhhhhhhhhhH-H-HHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC
Q 035631 519 FVLVICIECLINFQV-E-GLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN 596 (684)
Q Consensus 519 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~ 596 (684)
.+.+++..|..++-. . |.++.+......++ -.-+|+|.+...| ||++|+++++.+++++.
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~~~fk~gl-GG~~GsGrQ~~SW-----------------IhieD~v~~I~fll~~~ 212 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKMLPLFKLGL-GGKLGSGRQWFSW-----------------IHIEDLVNAILFLLENE 212 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhcchhhhcc-CCccCCCCceeee-----------------eeHHHHHHHHHHHHhCc
Confidence 466777777775532 2 22222222111111 1233566666666 99999999999999986
Q ss_pred -ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCch-------hHhhhhhccCCCCCcCCchhh-hhcCC-CchhHHH
Q 035631 597 -CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNL-------EEQAKVLVAPRSNNHMDVTKL-KKEFP-EVLSIKD 666 (684)
Q Consensus 597 -~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~kl-~~~~~-~~~~~~~ 666 (684)
.+|.||+++|.+++.+++.+.+.+.++++... +++. .+...... ....+=++|| ..+|. ..+++++
T Consensus 213 ~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~-~vP~~~~rl~LGe~a~~lL---~gQrvlP~kl~~aGF~F~y~dl~~ 288 (297)
T COG1090 213 QLSGPFNLTAPNPVRNKEFAHALGRALHRPAIL-PVPSFALRLLLGEMADLLL---GGQRVLPKKLEAAGFQFQYPDLEE 288 (297)
T ss_pred CCCCcccccCCCcCcHHHHHHHHHHHhCCCccc-cCcHHHHHHHhhhhHHHHh---ccchhhHHHHHHCCCeeecCCHHH
Confidence 89999999999999999999999999964332 2222 22233333 2345567888 88888 7999999
Q ss_pred HHHHHHhh
Q 035631 667 SIIKYVLE 674 (684)
Q Consensus 667 ~l~~~~~~ 674 (684)
+|.+.++.
T Consensus 289 AL~~il~~ 296 (297)
T COG1090 289 ALADILKR 296 (297)
T ss_pred HHHHHHhc
Confidence 99987753
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=219.65 Aligned_cols=266 Identities=14% Similarity=0.094 Sum_probs=181.3
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCCh-------------hHHHHHHHhcCCCeEEEcceecCCCCcccccc
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK-------------NSLLDDMKRVRPTHVLNAAGITGRPNVDWCES 440 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~-------------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 440 (684)
|||||||||||++++++|+++|++|..+..+.... ..+.+.+.+ +|+|||||+.... ...+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~D~Vvh~a~~~~~-~~~~~~~ 77 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEG--ADAVINLAGEPIA-DKRWTEE 77 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCC--CCEEEECCCCCcc-cccCCHH
Confidence 69999999999999999999999985544432211 222334444 5999999996410 1123345
Q ss_pred chhhHhhhchhhhHHHHHHHHHcCC-e--EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhH-
Q 035631 441 HRVETIRTNVMGTLTLADVCKEKNV-L--LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL- 516 (684)
Q Consensus 441 ~~~~~~~~nv~~~~~ll~~~~~~~~-~--~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~- 516 (684)
.+....++|+.++.+++++|+++++ + +|+.||..+|+.....+ ++|++++. |.+.|+..+...|.....
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~------~~E~~~~~-~~~~~~~~~~~~e~~~~~~ 150 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV------FTEEDSPA-GDDFLAELCRDWEEAAQAA 150 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC------cCcccCCC-CCChHHHHHHHHHHHhhhc
Confidence 6678899999999999999999876 2 55555566888544444 78887665 767777777777765332
Q ss_pred HhhhhhhhhhhhhhhhHHH--HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHh
Q 035631 517 EIFVLVICIECLINFQVEG--LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMAR 594 (684)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~ 594 (684)
...+.++.+.|+..+++.+ ....+........ ...+|++.+.++| +|++|+|+++..+++
T Consensus 151 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~-----------------i~v~Dva~~i~~~l~ 212 (292)
T TIGR01777 151 EDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGL-GGPLGSGRQWFSW-----------------IHIEDLVQLILFALE 212 (292)
T ss_pred hhcCCceEEEeeeeEECCCcchhHHHHHHHhcCc-ccccCCCCccccc-----------------EeHHHHHHHHHHHhc
Confidence 3346778888888777653 1122111111111 1124677778888 999999999999998
Q ss_pred cC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhh----hccCCCCCcCCchhh-hhcCCCc-hhHHHH
Q 035631 595 RN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKV----LVAPRSNNHMDVTKL-KKEFPEV-LSIKDS 667 (684)
Q Consensus 595 ~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~kl-~~~~~~~-~~~~~~ 667 (684)
++ ..|+||+++++.+|+.|+++.+++.+|.+... +++....... ......+.+++++|+ +++|.+. ++++|+
T Consensus 213 ~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (292)
T TIGR01777 213 NASISGPVNATAPEPVRNKEFAKALARALHRPAFF-PVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEA 291 (292)
T ss_pred CcccCCceEecCCCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhc
Confidence 75 66899999999999999999999999965332 3444321111 011112667899999 7788754 467765
Q ss_pred H
Q 035631 668 I 668 (684)
Q Consensus 668 l 668 (684)
|
T Consensus 292 ~ 292 (292)
T TIGR01777 292 L 292 (292)
T ss_pred C
Confidence 3
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-24 Score=226.96 Aligned_cols=259 Identities=22% Similarity=0.232 Sum_probs=187.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccc-cccC----CC----------------CCCCCCceEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSS-LKNL----HP----------------SRASPNFKFL 68 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~-~~~l----~~----------------~~~~~~~~~~ 68 (684)
.+++|||||||||||.+|++.|++.+++ .+|+++.|...... .+.+ .. .....+++.+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 4689999999999999999999987544 38999999653221 1111 00 0013578999
Q ss_pred EecCCCH------HHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccc
Q 035631 69 KGDITCA------DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVY 142 (684)
Q Consensus 69 ~~Dl~d~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vy 142 (684)
.+|+.++ +....+. .++|+|||+|+....+ .++....++|+.++.+++++|++.+.+++|||+||+.||
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~--~~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIA--KEVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EeeCCCcccCCCHHHHHHHH--hcCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 9999986 3444444 5799999999987643 567789999999999999999987657899999999999
Q ss_pred cCCCCCCCC-CCC-----------------------------------C---C----------------CCCCCCChhHH
Q 035631 143 GETDMESDI-GNP-----------------------------------E---A----------------SQLLPTNPYSA 167 (684)
Q Consensus 143 g~~~~~~~~-~~~-----------------------------------e---~----------------~~~~p~~~Y~~ 167 (684)
|...+...+ ... + . .-..-.+.|..
T Consensus 273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~ 352 (605)
T PLN02503 273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF 352 (605)
T ss_pred cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence 976422111 110 0 0 00112378999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCce----------eCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNV----------YGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v----------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
+|+++|.+++++. .++|++|+||+.| ++++.. ...+.++.. ..|.--.++++++...|+|+++.+
T Consensus 353 TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~--~~~p~~~~~-g~G~lr~~~~~~~~~~DiVPVD~v 427 (605)
T PLN02503 353 TKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNR--MMDPIVLYY-GKGQLTGFLADPNGVLDVVPADMV 427 (605)
T ss_pred HHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCcc--ccchhhhhe-eccceeEEEeCCCeeEeEEeecHH
Confidence 9999999998654 3899999999999 444321 122222222 234323366888999999999999
Q ss_pred HHHHHHHHhc-----CCCCcEEEecCC--CccCHHHHHHHHHHHhCCCC
Q 035631 238 AEAFDVILHR-----GVIGHVYNVGTK--KERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 238 a~~i~~~~~~-----~~~~~~~ni~~~--~~~t~~e~~~~i~~~~g~~~ 279 (684)
+++++.++.. .....+||++++ +++++.++.+.+.+.+...|
T Consensus 428 vna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P 476 (605)
T PLN02503 428 VNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP 476 (605)
T ss_pred HHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence 9999988532 124679999988 89999999999998776543
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=215.46 Aligned_cols=255 Identities=18% Similarity=0.176 Sum_probs=178.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|||||||||||||++|+++|+++||+| +++.+|++|.+++.++++++ |+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~--d~Vi~~~~~~--- 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGV--TAIIDASTSR--- 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCC--CEEEECCCCC---
Confidence 699999999999999999999999986 45677999999999999987 9999997622
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
..++..+.++|+.++.+++++|++.++ ++|++||.++.. . +.++|..+|..+|.
T Consensus 76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------------~-~~~~~~~~K~~~e~ 130 (317)
T CHL00194 76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------------Y-PYIPLMKLKSDIEQ 130 (317)
T ss_pred -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------------c-CCChHHHHHHHHHH
Confidence 234556888999999999999999998 599998853221 0 23468899999987
Q ss_pred hhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHH
Q 035631 513 LSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592 (684)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~ 592 (684)
+.. ..+.+.++.|+..++.. +............ ....+++.+.++| +|++|+|+++..+
T Consensus 131 ~l~--~~~l~~tilRp~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------i~v~Dva~~~~~~ 189 (317)
T CHL00194 131 KLK--KSGIPYTIFRLAGFFQG-LISQYAIPILEKQ-PIWITNESTPISY-----------------IDTQDAAKFCLKS 189 (317)
T ss_pred HHH--HcCCCeEEEeecHHhhh-hhhhhhhhhccCC-ceEecCCCCccCc-----------------cCHHHHHHHHHHH
Confidence 653 34566666776644421 1111110011111 1223445566688 9999999999999
Q ss_pred HhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh------hhh----------h-----ccCCCCCcC
Q 035631 593 ARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ------AKV----------L-----VAPRSNNHM 649 (684)
Q Consensus 593 ~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------~~~----------~-----~~~~~~~~~ 649 (684)
++++ .+++||+++++.+|++|+++.+.+.+|.+..+.+++.... ... . .........
T Consensus 190 l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 269 (317)
T CHL00194 190 LSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSS 269 (317)
T ss_pred hcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCC
Confidence 9865 4679999999999999999999999997655544443211 000 0 001112234
Q ss_pred CchhhhhcCC--C--chhHHHHHHHHHhhccc
Q 035631 650 DVTKLKKEFP--E--VLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 650 d~~kl~~~~~--~--~~~~~~~l~~~~~~~~~ 677 (684)
+.+++...++ + ..++++++++++..+.+
T Consensus 270 ~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 270 SMAELYKIFKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred CHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence 5666743433 3 46899999999876555
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=220.79 Aligned_cols=247 Identities=18% Similarity=0.175 Sum_probs=179.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC--CeE----------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG--IAF----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g--~~v----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
.|+||||||+||||++|+++|+++| ++| .++.+|++|.+.+.++++++ |+|||+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i--D~Vih~ 81 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV--DYVVHA 81 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC--CEEEEC
Confidence 4689999999999999999999986 544 35678999999999998876 999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
||.. .......++...+++|+.++.+++++|.+.++ ++|++||... .. |.++|+.
T Consensus 82 Ag~~---~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------------~~-p~~~Y~~ 137 (324)
T TIGR03589 82 AALK---QVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------------AN-PINLYGA 137 (324)
T ss_pred cccC---CCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------------CC-CCCHHHH
Confidence 9965 22334556778999999999999999999886 6999998521 12 6678999
Q ss_pred hhHhHhhhhhH-----HhhhhhhhhhhhhhhhHHH--HHHhhhhhhcccc-ccceecCCCCCchHHHHhhhcccccccCC
Q 035631 506 TKAMVTFLSYL-----EIFVLVICIECLINFQVEG--LLKAYENVCTLRL-RMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 506 sK~~~E~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
+|+.+|.+... ...+.++.+.|+.++++.+ +.+.+......+. .+++ +++.+.|+|
T Consensus 138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i-~~~~~~r~~--------------- 201 (324)
T TIGR03589 138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPI-TDPRMTRFW--------------- 201 (324)
T ss_pred HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeee-CCCCceEee---------------
Confidence 99999988432 2345667777777776542 2333333333332 2333 456677888
Q ss_pred CccchhhHHHHHHHHHhcCcc-ceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--
Q 035631 578 SMTVLDEMLPIAIEMARRNCR-GAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-- 654 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~~~-g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-- 654 (684)
+|++|++++++.++++... .+| ++++..+++.|+++.+.+..... ..+....+ ..+ ...+|++|+
T Consensus 202 --i~v~D~a~a~~~al~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~~~--~~~~~~g~------~~~-~~~~~~~~~~~ 269 (324)
T TIGR03589 202 --ITLEQGVNFVLKSLERMLGGEIF-VPKIPSMKITDLAEAMAPECPHK--IVGIRPGE------KLH-EVMITEDDARH 269 (324)
T ss_pred --EEHHHHHHHHHHHHhhCCCCCEE-ccCCCcEEHHHHHHHHHhhCCee--EeCCCCCc------hhH-hhhcChhhhhh
Confidence 9999999999999987533 467 46667899999999999865421 11111111 011 345688998
Q ss_pred hhcCCCchhHHHHHHHH
Q 035631 655 KKEFPEVLSIKDSIIKY 671 (684)
Q Consensus 655 ~~~~~~~~~~~~~l~~~ 671 (684)
.++|.+..+++++++.+
T Consensus 270 ~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 270 TYELGDYYAILPSISFW 286 (324)
T ss_pred hcCCCCeEEEccccccc
Confidence 57888888999888754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=222.86 Aligned_cols=234 Identities=17% Similarity=0.200 Sum_probs=169.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
||||||||+||||++|++.|+++ |++|++++|.... ....+++++.+|+.+.. +.+++ .++|+|||
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~---------~~~~~ve~v~~Dl~d~~-l~~al--~~~D~VIH 66 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHD---------ALDPRVDYVCASLRNPV-LQELA--GEADAVIH 66 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhh---------cccCCceEEEccCCCHH-HHHHh--cCCCEEEE
Confidence 58999999999999999999999 8999999986421 11246889999999985 66666 68999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+.... . ...+|+.++.|++++|++.+ + ++||+||. ||... .|. .+
T Consensus 67 LAa~~~~-----~---~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~--~G~~~-----------------~~~----~a 113 (699)
T PRK12320 67 LAPVDTS-----A---PGGVGITGLAHVANAAARAG-A-RLLFVSQA--AGRPE-----------------LYR----QA 113 (699)
T ss_pred cCccCcc-----c---hhhHHHHHHHHHHHHHHHcC-C-eEEEEECC--CCCCc-----------------ccc----HH
Confidence 9986421 1 22589999999999999988 4 79999985 33210 121 36
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
|.++.. ++++++++|++++||++.... +++..++.....++++ .+||++|++++++.+++.+.
T Consensus 114 E~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI----------~vIyVdDvv~alv~al~~~~- 178 (699)
T PRK12320 114 ETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI----------RVLHLDDLVRFLVLALNTDR- 178 (699)
T ss_pred HHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce----------EEEEHHHHHHHHHHHHhCCC-
Confidence 666543 468999999999999965321 3556665554444433 34899999999999998654
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHH
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWE 315 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~ 315 (684)
+++|||++++.+|+.|+++.+........ +. .........-|....+. ++|.|+..|+
T Consensus 179 ~GiyNIG~~~~~Si~el~~~i~~~~p~~~---~~----~~~~~~~~~pdi~~a~~~~~w~~~~~~~ 237 (699)
T PRK12320 179 NGVVDLATPDTTNVVTAWRLLRSVDPHLR---TR----RVRSWEQLIPEVDIAAVQEDWNFEFGWQ 237 (699)
T ss_pred CCEEEEeCCCeeEHHHHHHHHHHhCCCcc---cc----ccccHHHhCCCCchhhhhcCCCCcchHH
Confidence 45999999999999999999877632111 11 01111122345566655 8999987765
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=209.35 Aligned_cols=278 Identities=19% Similarity=0.182 Sum_probs=203.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC--C------------------------eEeeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG--I------------------------AFEFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g--~------------------------~v~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
-+++||||+||+|.||+++|++++ . .|.+..+|++|...+...+.++ .|+|
T Consensus 5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~---~Vvh 81 (361)
T KOG1430|consen 5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA---VVVH 81 (361)
T ss_pred CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc---eEEE
Confidence 389999999999999999999998 2 2356778888888888888775 7777
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCC-CCCCCCCccCCCCCCCCChh
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHP-QGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~-~~~~~~~~e~~~~~~p~~~Y 503 (684)
||+.. .......+++..+++||.||.+++++|.+.++ ++||+||..|..+..... .+|..|+ |.. ..+.|
T Consensus 82 ~aa~~---~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~----p~~-~~d~Y 153 (361)
T KOG1430|consen 82 CAASP---VPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPY----PLK-HIDPY 153 (361)
T ss_pred ecccc---CccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCC----ccc-ccccc
Confidence 77744 45666778999999999999999999999998 499999999876444422 1122212 122 44689
Q ss_pred hhhhHhHhhhhhHHh--hhhhhhhhhhhhhhHHH---HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 504 SKTKAMVTFLSYLEI--FVLVICIECLINFQVEG---LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
+.||+.||++..... ..+.++..|+..+||+| ..+.+...+..+.-+...|+++..-+|
T Consensus 154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~---------------- 217 (361)
T KOG1430|consen 154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDF---------------- 217 (361)
T ss_pred chHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccce----------------
Confidence 999999998854443 45677888888888777 455555555555556677777777788
Q ss_pred ccchhhHHHHHHHHHh----cC---ccceeEecCCCcccHHHHHHHHHhhcCCccc-ccCCchh---------Hhhhhhc
Q 035631 579 MTVLDEMLPIAIEMAR----RN---CRGAWNFTNPGVISHNEILELYKEYIDPQLK-WSNFNLE---------EQAKVLV 641 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~----~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~---------~~~~~~~ 641 (684)
+|++.++.+++.+.. +. .+..|+|.++.++...++...+.+.+|.... ...++.. +......
T Consensus 218 -~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l 296 (361)
T KOG1430|consen 218 -TYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLL 296 (361)
T ss_pred -EEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhc
Confidence 999999999886643 22 3459999999999888888899999997555 2222221 1101111
Q ss_pred c---CC----------CCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 642 A---PR----------SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 642 ~---~~----------~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+ |. +....+.+|+ ++++.+..++++++.+++++...
T Consensus 297 ~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~ 347 (361)
T KOG1430|consen 297 RPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVAS 347 (361)
T ss_pred cCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhh
Confidence 1 11 2556789999 56677999999999999975544
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=187.92 Aligned_cols=278 Identities=19% Similarity=0.241 Sum_probs=216.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------------eeeeccCCChhHHHHHHHhcC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------------EFGTGRLEDKNSLLDDMKRVR 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~d~~d~~~~~~~~~~~~ 419 (684)
.++-.||||-||.-|++|++.|+.+||+| ....+|++|...+..++..++
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 34457999999999999999999999987 456789999999999999999
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC----CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN----VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~----~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|+-|+|+|+.+ ++..+.+-++.+.++...|+.+||++.+.++ +||...||+..||.-.+.| -+|.+|
T Consensus 107 PtEiYnLaAQS---HVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~P------QsE~TP 177 (376)
T KOG1372|consen 107 PTEVYNLAAQS---HVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIP------QSETTP 177 (376)
T ss_pred chhhhhhhhhc---ceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCC------cccCCC
Confidence 99999999955 8999999999999999999999999999864 5899999999999666655 778888
Q ss_pred CCCCCChhhhhhHhHhhh--hhHHhhhhhhhhhhhhhhh---------HHHHHHhhhhhhccccccceecCCCCCchHHH
Q 035631 496 PNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINFQ---------VEGLLKAYENVCTLRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 564 (684)
.. |+++|+.+|..+-.+ .|+|.+.+-.+...+.+.. +..+.+.+.+...........|+....|||
T Consensus 178 Fy-PRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDW-- 254 (376)
T KOG1372|consen 178 FY-PRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDW-- 254 (376)
T ss_pred CC-CCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhccc--
Confidence 87 999999999988655 5777776655554444442 222333333332222223455888888899
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh--------
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ-------- 636 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------- 636 (684)
-|..|.++|+..+++++.+..|.++.++..|.+|+++.....+|..+.|..-...+.
T Consensus 255 ---------------GhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v 319 (376)
T KOG1372|consen 255 ---------------GHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVV 319 (376)
T ss_pred ---------------chhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceE
Confidence 999999999999999999999999999999999999999888887666653211111
Q ss_pred ----hhhhccCC--CCCcCCchhh--hhcCCCchhHHHHHHHHHhh
Q 035631 637 ----AKVLVAPR--SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLE 674 (684)
Q Consensus 637 ----~~~~~~~~--~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~ 674 (684)
.++-.||. -...-|.+|+ .++|.+...+.+-+++|+..
T Consensus 320 ~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 320 RVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred EEEecccccCcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 11112221 1234578888 66888999999999998853
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=183.68 Aligned_cols=302 Identities=24% Similarity=0.297 Sum_probs=225.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC------CCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS------RASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
+-.||||-||.=|+.|++.|+++ |++|.++.|..+.-.-..+... .....++.+.+|++|...+.+++...+
T Consensus 29 kvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 45699999999999999999999 9999999987542222222111 123568899999999999999998789
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCCh
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP 164 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 164 (684)
|+-|+|+|+......+.+-++..-++...|+..|+++.+..+ ..-||-..||...||...+.+ ..|.+|..|.++
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~P---QsE~TPFyPRSP 183 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIP---QSETTPFYPRSP 183 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCC---cccCCCCCCCCh
Confidence 999999999988887777777888899999999999998764 235889999999999877644 489999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeC---CCCCCCChHHHHH----HHHHcCC-ceEEecCCCceEecccHHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYG---PNQFPEKLIPKFI----LLAMKGQ-QLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G---~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~i~~~D 236 (684)
|+.+|..+--++-+|.+.+++-.+ -|.+|- |... .+|+.+-+ ..+..++ .....++-+..|||-|..|
T Consensus 184 Ya~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRG-enFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~d 259 (376)
T KOG1372|consen 184 YAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRG-ENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGD 259 (376)
T ss_pred hHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccc-cchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHH
Confidence 999999887777777777655332 233332 2221 24444322 2233332 2223477888999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCc----------------ceeecc--CCCCCCcceec
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK----------------TIHYVQ--DRPFNDHRYFL 298 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~----------------~~~~~~--~~~~~~~~~~~ 298 (684)
-+++|+.+++++.+. -|.|+.++..|++|+++......|..... .+...+ -+|.......-
T Consensus 260 YVEAMW~mLQ~d~Pd-DfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqG 338 (376)
T KOG1372|consen 260 YVEAMWLMLQQDSPD-DFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQG 338 (376)
T ss_pred HHHHHHHHHhcCCCC-ceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcC
Confidence 999999999987755 78999999999999999888877732110 001100 11222234457
Q ss_pred CHHHHHh-cCCcccCCHHHHHHHHHHH
Q 035631 299 DDQKLKR-LGWKEKTPWEEGLKLTLEW 324 (684)
Q Consensus 299 d~~k~~~-lg~~p~~~~~e~i~~~i~~ 324 (684)
|.+|+++ |||+|+.++++-+++|+..
T Consensus 339 dasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 339 DASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred ChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 8999988 9999999999999999853
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=207.71 Aligned_cols=219 Identities=26% Similarity=0.325 Sum_probs=133.5
Q ss_pred EEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-ccc----CCCCC--------CCCCceEEEecCCCH------HH
Q 035631 17 ITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKN----LHPSR--------ASPNFKFLKGDITCA------DL 77 (684)
Q Consensus 17 ItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~----l~~~~--------~~~~~~~~~~Dl~d~------~~ 77 (684)
|||||||||++|+++|++..+..+|+++.|..+... .+. +.... ..++++++.+|+.++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999954349999999764311 111 12111 257899999999984 34
Q ss_pred HHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCC------C
Q 035631 78 MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESD------I 151 (684)
Q Consensus 78 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~------~ 151 (684)
+..+. .++|+|||+|+..+... +.....+.|+.++++|++.|.+.. .++|+|+||+.+.+....... .
T Consensus 81 ~~~L~--~~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~ 154 (249)
T PF07993_consen 81 YQELA--EEVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEE 154 (249)
T ss_dssp HHHHH--HH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred hhccc--cccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccc
Confidence 55554 68999999999887643 344578999999999999999765 569999999666555443211 0
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceE-EecCCC
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLP-IHGNGS 226 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~ 226 (684)
+..........+.|..||+.+|++++++.++.+++++|+||+.|+|.... ...++..++......+.++ ..++.+
T Consensus 155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 234 (249)
T PF07993_consen 155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPD 234 (249)
T ss_dssp --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---
T ss_pred cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCC
Confidence 11122344556789999999999999998888999999999999994321 2233444444444433333 445556
Q ss_pred ceEecccHHHHHHHH
Q 035631 227 NVRSYLYCADVAEAF 241 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i 241 (684)
...+++.++.+|++|
T Consensus 235 ~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 235 ARLDLVPVDYVARAI 249 (249)
T ss_dssp TT--EEEHHHHHHHH
T ss_pred ceEeEECHHHHHhhC
Confidence 679999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-23 Score=221.57 Aligned_cols=225 Identities=16% Similarity=0.092 Sum_probs=165.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC------------------------------------------------eEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI------------------------------------------------AFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~------------------------------------------------~v~~~~~ 403 (684)
++|||||||||+|++|++.|++.+. .|+++.+
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G 91 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG 91 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence 5899999999999999999886532 2356778
Q ss_pred cCC-------ChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-CC-eEEEEecce
Q 035631 404 RLE-------DKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-NV-LLMNFATGC 474 (684)
Q Consensus 404 d~~-------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~ 474 (684)
|++ +.+.+..++++. |+|||+||.. +. ..++....++|+.|+.+++++|++. ++ ++||+||++
T Consensus 92 Dl~~~~LGLs~~~~~~~l~~~v--D~ViH~AA~v---~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 92 DISYDDLGVKDSNLREEMWKEI--DIVVNLAATT---NF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred ccCCcCCCCChHHHHHHHHhCC--CEEEECcccc---CC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 876 445566777765 9999999965 22 2467889999999999999999986 55 599999999
Q ss_pred eeecCCCCCCCCCCCCc---------------------------------cC-----------C---CCCCCCChhhhhh
Q 035631 475 IYEYDSMHPQGSSIGFK---------------------------------ED-----------D---EPNFTRSFYSKTK 507 (684)
Q Consensus 475 vy~~~~~~~~~~~~~~~---------------------------------e~-----------~---~~~~p~~~Y~~sK 507 (684)
|||..... ..|. ++. |+ . ... +.+.|+.||
T Consensus 164 vyG~~~~~-i~E~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pn~Y~~TK 240 (491)
T PLN02996 164 VCGEKSGL-ILEK-PFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG-WPNTYVFTK 240 (491)
T ss_pred EecCCCce-eeee-cCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC-CCCchHhhH
Confidence 99864321 0110 011 00 0 111 346799999
Q ss_pred HhHhhhhhHHhhhhhhhhhhhhhhhHHHHHH------------hhhhhhccccccceecCCCCCchHHHHhhhccccccc
Q 035631 508 AMVTFLSYLEIFVLVICIECLINFQVEGLLK------------AYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 508 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
+++|+++..+..+.++.+.|+.++++.+-.+ .+......+....++|++++.++|
T Consensus 241 ~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~------------- 307 (491)
T PLN02996 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDV------------- 307 (491)
T ss_pred HHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecce-------------
Confidence 9999997666668899999999887643111 111112333334577889999999
Q ss_pred CCCccchhhHHHHHHHHHhcC-----ccceeEecCC--CcccHHHHHHHHHhhcCC
Q 035631 576 PNSMTVLDEMLPIAIEMARRN-----CRGAWNFTNP--GVISHNEILELYKEYIDP 624 (684)
Q Consensus 576 ~~~~i~v~D~~~~~~~~~~~~-----~~g~~ni~~~--~~~s~~e~~~~i~~~~g~ 624 (684)
+||||++++++.++... ...+||++++ .++|+.|+++.+.+.++.
T Consensus 308 ----v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 308 ----IPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred ----ecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 99999999999998742 2458999998 899999999999988764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=186.36 Aligned_cols=299 Identities=21% Similarity=0.287 Sum_probs=223.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
++..+-.+-|+|||||+|+.++.+|.+. |.+|++.-|... .....++.......+-+...|+.|++++..++ ...
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~-~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vv--k~s 131 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDE-YDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVV--KHS 131 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCc-cchhheeecccccceeeeccCCCCHHHHHHHH--HhC
Confidence 3445556789999999999999999999 899999988642 23333444444567889999999999999999 788
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
.+|||+.|..- +.......++|+.+++.|.+.|+++| +.|||++|+... .....+-|-.
T Consensus 132 NVVINLIGrd~----eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lga----------------nv~s~Sr~Lr 190 (391)
T KOG2865|consen 132 NVVINLIGRDY----ETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGA----------------NVKSPSRMLR 190 (391)
T ss_pred cEEEEeecccc----ccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccc----------------cccChHHHHH
Confidence 99999999643 23344667899999999999999998 999999998541 1334466999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc-eEecccHHHHHHHHHHHHh
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN-VRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i~~~~~ 246 (684)
+|.++|..+++...+ .+|+||+.+||..+ +++..+....++-..+++++.|+. ....+|+-|+|.+|..+++
T Consensus 191 sK~~gE~aVrdafPe----AtIirPa~iyG~eD---rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk 263 (391)
T KOG2865|consen 191 SKAAGEEAVRDAFPE----ATIIRPADIYGTED---RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK 263 (391)
T ss_pred hhhhhHHHHHhhCCc----ceeechhhhcccch---hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence 999999999876443 79999999999875 677777777777788899888754 4588999999999999998
Q ss_pred cCC-CCcEEEecCCCccCHHHHHHHHHHHhCCCCCc---------------ce---eeccCCCCCC--------cceecC
Q 035631 247 RGV-IGHVYNVGTKKERSVLDVAADICTLFKLEPEK---------------TI---HYVQDRPFND--------HRYFLD 299 (684)
Q Consensus 247 ~~~-~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~---------------~~---~~~~~~~~~~--------~~~~~d 299 (684)
.+. .+++|..++++...+.|+++.+.+.....+.. .+ .+.+..++.. ....++
T Consensus 264 Dp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt 343 (391)
T KOG2865|consen 264 DPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLT 343 (391)
T ss_pred CccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcC
Confidence 864 67899999999999999999998876532110 00 0001111111 111122
Q ss_pred H-HHHHhcCCcccCCHHHHHHHHHHHHHhCCCcccccccCCC
Q 035631 300 D-QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALC 340 (684)
Q Consensus 300 ~-~k~~~lg~~p~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~ 340 (684)
. .++..||..+ +++|..--+.+..|++..+|+....+...
T Consensus 344 ~~~tleDLgv~~-t~le~~~~e~l~~yR~~~~~f~ae~~e~~ 384 (391)
T KOG2865|consen 344 GAPTLEDLGVVL-TKLELYPVEFLRQYRKGGRYFGAEVGEKI 384 (391)
T ss_pred CCCcHhhcCcee-eecccccHHHHHHHhhcccchhhhhcccC
Confidence 2 2344588886 48887777777778887777766655544
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-22 Score=210.14 Aligned_cols=219 Identities=12% Similarity=0.072 Sum_probs=167.3
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc--C
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV--R 419 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~--~ 419 (684)
+...|+|||||||||||++++++|+++|++| +++.+|++|.+.+..++++. +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 3345699999999999999999999999876 24668999999999999864 4
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
+|+||||++.. . ......+++|+.++.+++++|++.++ ++|++||.++|+
T Consensus 137 ~D~Vi~~aa~~---~-----~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------------- 187 (390)
T PLN02657 137 VDVVVSCLASR---T-----GGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------------- 187 (390)
T ss_pred CcEEEECCccC---C-----CCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------------------
Confidence 79999998833 1 11234578899999999999999987 599999987763
Q ss_pred CCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCc-hHHHHhhhcccccccCC
Q 035631 499 TRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPR-NFVTKLARYNKVVNIPN 577 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 577 (684)
|...|..+|...|........+.+.++.|+..+++. .......+..+.++.++|++...+ ++
T Consensus 188 p~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~--~~~~~~~~~~g~~~~~~GdG~~~~~~~--------------- 250 (390)
T PLN02657 188 PLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKS--LGGQVEIVKDGGPYVMFGDGKLCACKP--------------- 250 (390)
T ss_pred cchHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcc--cHHHHHhhccCCceEEecCCcccccCc---------------
Confidence 445788999999877544345667777887766532 112223333444555678877655 46
Q ss_pred CccchhhHHHHHHHHHhcC--ccceeEecCC-CcccHHHHHHHHHhhcCCcccccCCchh
Q 035631 578 SMTVLDEMLPIAIEMARRN--CRGAWNFTNP-GVISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
||++|+|++++.+++++ .+++||++++ +.+|++|+++.+.+.+|++.++..++..
T Consensus 251 --I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~ 308 (390)
T PLN02657 251 --ISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQ 308 (390)
T ss_pred --eeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHH
Confidence 99999999999998755 4579999986 5899999999999999987666655544
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=224.78 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=172.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVD 436 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 436 (684)
|||+|||||||||++++++|+++|++| .++.+|++|.+.+..+++++ |+|||+|+.. .
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~v--D~VVHlAa~~---~-- 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGA--DVVAHCAWVR---G-- 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCC--CEEEECCCcc---c--
Confidence 689999999999999999999999976 35678999999999999876 9999999844 1
Q ss_pred ccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhh
Q 035631 437 WCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 437 ~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
...++|+.++.+++++|++.++ ++|++||.. |..+|++..
T Consensus 74 -------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------------K~aaE~ll~ 114 (854)
T PRK05865 74 -------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------------QPRVEQMLA 114 (854)
T ss_pred -------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------------HHHHHHHHH
Confidence 1568999999999999999887 699998851 788887653
Q ss_pred HHhhhhhhhhhhhhhhhHHHHHHhhhhhhcccccccee--cCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 516 LEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPIS--SDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
..+.++++.|+.++|+.+....+... ...+++ |++...++| +|++|+|+++..++
T Consensus 115 --~~gl~~vILRp~~VYGP~~~~~i~~l----l~~~v~~~G~~~~~~df-----------------IhVdDVA~Ai~~aL 171 (854)
T PRK05865 115 --DCGLEWVAVRCALIFGRNVDNWVQRL----FALPVLPAGYADRVVQV-----------------VHSDDAQRLLVRAL 171 (854)
T ss_pred --HcCCCEEEEEeceEeCCChHHHHHHH----hcCceeccCCCCceEee-----------------eeHHHHHHHHHHHH
Confidence 34677888888888766532211111 123333 344455688 99999999999998
Q ss_pred hcC--ccceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHH
Q 035631 594 RRN--CRGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSI 668 (684)
Q Consensus 594 ~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l 668 (684)
++. .+++||+++++.+|++|+++.+.+.... ..... ....+....... .....+|++|+ .++|.+..+++++|
T Consensus 172 ~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~-~~~~~~~~~~~~-~~~~~~D~sKar~~LGw~P~~sLeeGL 249 (854)
T PRK05865 172 LDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVL-RRVTSFAELELL-HSAPLMDVTLLRDRWGFQPAWNAEECL 249 (854)
T ss_pred hCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhh-hhccchhhhhcc-cCCccCCHHHHHHHhCCCCCCCHHHHH
Confidence 654 4679999999999999999998864321 00000 000000000011 12457899999 45788888999999
Q ss_pred HHHHhhccc
Q 035631 669 IKYVLEPNK 677 (684)
Q Consensus 669 ~~~~~~~~~ 677 (684)
+++++++..
T Consensus 250 ~dti~~~r~ 258 (854)
T PRK05865 250 EDFTLAVRG 258 (854)
T ss_pred HHHHHHHHh
Confidence 999987764
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-22 Score=224.21 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=157.4
Q ss_pred eEEEEEcCCcchhHHHHHHHH--hcCCeEe------------------------eeeccCCCh------hHHHHHHHhcC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCK--DKGIAFE------------------------FGTGRLEDK------NSLLDDMKRVR 419 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~--~~g~~v~------------------------~~~~d~~d~------~~~~~~~~~~~ 419 (684)
|+|||||||||||++|+++|+ ++|++|. ++.+|++|. +.+..+ ++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~-- 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD-- 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC--
Confidence 699999999999999999999 5787662 345677763 344443 44
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC--
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP-- 496 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~-- 496 (684)
+|+||||||.. +. ........++|+.++.+++++|.+.++ ++||+||..+||.... + ++|++..
T Consensus 78 ~D~Vih~Aa~~---~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~------~~e~~~~~~ 144 (657)
T PRK07201 78 IDHVVHLAAIY---DL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-V------FREDDFDEG 144 (657)
T ss_pred CCEEEECceee---cC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-c------cccccchhh
Confidence 59999999965 21 234567789999999999999999876 6999999999985432 2 3443321
Q ss_pred CCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHH-------------hhhhhhccccccceecCCCCCchHH
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLK-------------AYENVCTLRLRMPISSDLSNPRNFV 563 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~ 563 (684)
..+.+.|+.+|.++|.+... ..+.++++.|+.++++....+ .+..........++.+.+...+++
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNI- 222 (657)
T ss_pred cCCCCchHHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeee-
Confidence 11457899999999988653 346677888888776542110 111110000112233333344466
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcc
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQL 626 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~ 626 (684)
+|++|+++++..+++.+ .+++||+++++++|+.|+++.+.+.+|.+.
T Consensus 223 ----------------v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 223 ----------------VPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred ----------------eeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 99999999999998754 356999999999999999999999999765
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=198.59 Aligned_cols=222 Identities=10% Similarity=0.033 Sum_probs=155.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe--------------------------eeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------------------FGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
++|||||||||||++++++|+++||+|. ++.+|++|.+.+.+++.++ |.|+|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~--d~v~~ 84 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGC--SGLFC 84 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCC--CEEEE
Confidence 4899999999999999999999998762 3456888999998889887 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC-----C
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN-----F 498 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~-----~ 498 (684)
+++.. . .. .......+++|+.++.+++++|.+. ++ ++|++||..++......+ ....+++|+++.. .
T Consensus 85 ~~~~~---~-~~-~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~-~~~~~~~E~~~~~~~~~~~ 158 (297)
T PLN02583 85 CFDPP---S-DY-PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNI-STQKDVDERSWSDQNFCRK 158 (297)
T ss_pred eCccC---C-cc-cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccC-CCCCCCCcccCCCHHHHhh
Confidence 87643 1 11 1235688999999999999999986 44 699999987653211100 1122366665432 0
Q ss_pred CCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 499 TRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
+...|+.||.++|++.+.. ..+..+++.|+..+++++...... .+. . ....++++ ...|
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~-~~~-~-~~~~~~~~--~~~~-------------- 219 (297)
T PLN02583 159 FKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP-YLK-G-AAQMYENG--VLVT-------------- 219 (297)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh-hhc-C-CcccCccc--Ccce--------------
Confidence 1237999999999986543 446677777877776554321110 110 0 01111221 2345
Q ss_pred CCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcC
Q 035631 577 NSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
|||+|+|++++.+++.+ ..|.|+++++......++++.+.+.+.
T Consensus 220 ---v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 220 ---VDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred ---EEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCC
Confidence 99999999999999976 556899888666667889999988775
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-22 Score=192.07 Aligned_cols=206 Identities=18% Similarity=0.185 Sum_probs=143.7
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCe---------------------------Ee----eeeccCCChhHHHHHHHhcCCCe
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIA---------------------------FE----FGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~---------------------------v~----~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
||||||+|.||+.|+++|++.+-. +. .+.+|++|.+.+..+++..+||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799999999999999999988741 12 24789999999999999999999
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|||+||+- ++..++.+|.+..++|+.||.|++++|.++++ ++|++||.-. .+ |.+
T Consensus 81 VfHaAA~K---hVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------------v~-Ptn 136 (293)
T PF02719_consen 81 VFHAAALK---HVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------------VN-PTN 136 (293)
T ss_dssp EEE---------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------------SS---S
T ss_pred EEEChhcC---CCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------------CC-CCc
Confidence 99999977 88999999999999999999999999999998 5999999622 22 889
Q ss_pred hhhhhhHhHhhhhhHHhhh-----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc-
Q 035631 502 FYSKTKAMVTFLSYLEIFV-----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI- 575 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 575 (684)
.||.||+++|.+....... ..+...|+.++ .|+-++....+.+.++.+.++..
T Consensus 137 vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNV---------------------lgS~GSVip~F~~Qi~~g~PlTvT 195 (293)
T PF02719_consen 137 VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNV---------------------LGSRGSVIPLFKKQIKNGGPLTVT 195 (293)
T ss_dssp HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EE---------------------TTGTTSCHHHHHHHHHTTSSEEEC
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecce---------------------ecCCCcHHHHHHHHHHcCCcceeC
Confidence 9999999999885443332 24444555433 34434444444444333332211
Q ss_pred -C---CCccchhhHHHHHHHHHhcCcc-ceeEecCCCcccHHHHHHHHHhhcCC
Q 035631 576 -P---NSMTVLDEMLPIAIEMARRNCR-GAWNFTNPGVISHNEILELYKEYIDP 624 (684)
Q Consensus 576 -~---~~~i~v~D~~~~~~~~~~~~~~-g~~ni~~~~~~s~~e~~~~i~~~~g~ 624 (684)
+ +-++.+++.++.++.+.....+ .+|..--|+++++.|+++.+.+..|.
T Consensus 196 ~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 196 DPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGL 249 (293)
T ss_dssp ETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred CCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhccc
Confidence 1 1669999999999999876644 48999889999999999999999984
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-21 Score=191.71 Aligned_cols=210 Identities=18% Similarity=0.137 Sum_probs=155.9
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----CC-CC
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----EG-ID 88 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~-~d 88 (684)
+||||||||++|++++++|+++ |++|++++|++... ...+++.+.+|+.|.+.+..++.. .+ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~---------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSS---------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccc---------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 4899999999999999999999 89999999975311 124677888999999999988832 35 89
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
.|+|+++... . . ....++++++|+++| ++|||++||..++... ..
T Consensus 70 ~v~~~~~~~~-----~-~-------~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~---------------------~~ 114 (285)
T TIGR03649 70 AVYLVAPPIP-----D-L-------APPMIKFIDFARSKG-VRRFVLLSASIIEKGG---------------------PA 114 (285)
T ss_pred EEEEeCCCCC-----C-h-------hHHHHHHHHHHHHcC-CCEEEEeeccccCCCC---------------------ch
Confidence 9999987432 1 0 234578999999998 9999999986543110 01
Q ss_pred HHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 169 KAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 169 K~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
+...|.++ ++ .+++++++||+++|+.... . .....+.....+. .+.++..++|++++|+|+++..++..
T Consensus 115 ~~~~~~~l----~~~~gi~~tilRp~~f~~~~~~--~---~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~ 184 (285)
T TIGR03649 115 MGQVHAHL----DSLGGVEYTVLRPTWFMENFSE--E---FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTD 184 (285)
T ss_pred HHHHHHHH----HhccCCCEEEEeccHHhhhhcc--c---ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcC
Confidence 22334444 33 3899999999998864311 1 1112223333333 35577889999999999999999987
Q ss_pred CC-CCcEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 248 GV-IGHVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 248 ~~-~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
+. .++.|++++++.+|+.|+++.+.+.+|.+.
T Consensus 185 ~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v 217 (285)
T TIGR03649 185 KVAPNTDYVVLGPELLTYDDVAEILSRVLGRKI 217 (285)
T ss_pred CCcCCCeEEeeCCccCCHHHHHHHHHHHhCCce
Confidence 53 467899999999999999999999999764
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.5e-21 Score=195.58 Aligned_cols=207 Identities=16% Similarity=0.174 Sum_probs=169.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe---------------------------EeeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA---------------------------FEFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~---------------------------v~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++||||||+|-||+.+++++++.+-. ..++.+|+.|.+.+..++++++||+||
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf 330 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF 330 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence 48999999999999999999988742 267889999999999999999999999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+||+- ++..++.||.+..++||.||.|++++|.+++++ +|.+||.- ..+ |.|.|
T Consensus 331 HAAA~K---HVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------------AV~-PtNvm 386 (588)
T COG1086 331 HAAALK---HVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------------AVN-PTNVM 386 (588)
T ss_pred Ehhhhc---cCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------------ccC-CchHh
Confidence 999988 788899999999999999999999999999985 99999862 233 88999
Q ss_pred hhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC--
Q 035631 504 SKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP-- 576 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 576 (684)
|.||+++|++..+... +..++..|+. .+.|+-++...++.+.++.|.++..+
T Consensus 387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFG---------------------NVlGSrGSViPlFk~QI~~GgplTvTdp 445 (588)
T COG1086 387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFG---------------------NVLGSRGSVIPLFKKQIAEGGPLTVTDP 445 (588)
T ss_pred hHHHHHHHHHHHHHhhccCCCCcEEEEEEec---------------------ceecCCCCCHHHHHHHHHcCCCccccCC
Confidence 9999999998444322 1334444444 24455556666666666555543332
Q ss_pred ---CCccchhhHHHHHHHHHhcCccc-eeEecCCCcccHHHHHHHHHhhcC
Q 035631 577 ---NSMTVLDEMLPIAIEMARRNCRG-AWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 577 ---~~~i~v~D~~~~~~~~~~~~~~g-~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
+-|+.++|.|+.++.+.....+| +|.+--|+++++.|+++.+.+..|
T Consensus 446 ~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 446 DMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred CceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 27799999999999998776555 899999999999999999999997
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=187.53 Aligned_cols=235 Identities=17% Similarity=0.150 Sum_probs=170.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----CC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----EG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 86 (684)
.++||||||+|+||++++++|+++ |++|+++.|+.. ....+... ...++.++++|+.|.+++..++.. .+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPD--ALDDLKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 899999998642 22222111 124688999999999988776532 46
Q ss_pred CCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||+||....... .++....+++|+.++.++++++ ++.+ .++||++||..... +
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--------------~ 141 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQI--------------A 141 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccc--------------C
Confidence 8999999997654322 2234567889999999999997 4444 68999999965431 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCce---eCCCCCCC--------ChHHHHHHHHHcCCceEEecC
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNV---YGPNQFPE--------KLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v---~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 224 (684)
..+.+.|+.+|+..|.+++.++.+ ++++++++||+.+ ||++.... .....+.+.. ....+.+
T Consensus 142 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 217 (276)
T PRK06482 142 YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL-ADGSFAI--- 217 (276)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH-hhccCCC---
Confidence 123468999999999999888765 5899999999988 66543211 1111222222 2222221
Q ss_pred CCceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFK 276 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g 276 (684)
+.+++|++++++.++..+..+..||+++++..++.|+++.+.+.++
T Consensus 218 ------~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 218 ------PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ------CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 3568999999999998776667899999999999988888877664
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=188.07 Aligned_cols=250 Identities=19% Similarity=0.197 Sum_probs=170.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccC----C-----CCCCCCCceEEEecCCC------HH
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNL----H-----PSRASPNFKFLKGDITC------AD 76 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l----~-----~~~~~~~~~~~~~Dl~d------~~ 76 (684)
++||+||||||+|++|+.+|+.+-+ .+|+++.|..+.+. ...+ . .....++++.+.+|+.. ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~-~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD-AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 4799999999999999999999843 59999999865322 1111 1 12346789999999984 44
Q ss_pred HHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCC-CCCCC
Q 035631 77 LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESD-IGNPE 155 (684)
Q Consensus 77 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~~~~e 155 (684)
.+.++. ..+|.|||+|+..+. ..+.......|+.|+..+++.|...+ .|.|+|+||++|+........ ...++
T Consensus 80 ~~~~La--~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~ 153 (382)
T COG3320 80 TWQELA--ENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDE 153 (382)
T ss_pred HHHHHh--hhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccc
Confidence 566666 789999999998763 24555777899999999999999865 789999999999764322211 01111
Q ss_pred C-----CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCC
Q 035631 156 A-----SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 156 ~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
. ....+.+.|+.||+.+|..+++.... |++++|+|||.|-|+... ...++.+++....+-..++ +..
T Consensus 154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~ 229 (382)
T COG3320 154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSE 229 (382)
T ss_pred ccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---Ccc
Confidence 1 22346688999999999999998777 999999999999998542 2235556655554433332 222
Q ss_pred ceEecccHHHHHHHH-----------HHHHhcC-CCCcEEE-ecCCCccCHHHHHHHHHH
Q 035631 227 NVRSYLYCADVAEAF-----------DVILHRG-VIGHVYN-VGTKKERSVLDVAADICT 273 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i-----------~~~~~~~-~~~~~~n-i~~~~~~t~~e~~~~i~~ 273 (684)
...+.+.++.+++++ ..+...+ .....|+ ...+..+.+.++.+.+.+
T Consensus 230 ~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 230 YSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 233444433333333 3333211 1112333 344788999999998887
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=227.11 Aligned_cols=255 Identities=19% Similarity=0.215 Sum_probs=182.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcC--CCcEEEEEcCCCccccc-ccCC---------CCCCCCCceEEEecCCC-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNY--PDYEIVALDKLDYCSSL-KNLH---------PSRASPNFKFLKGDITC----- 74 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~--~g~~V~~~~r~~~~~~~-~~l~---------~~~~~~~~~~~~~Dl~d----- 74 (684)
.++|||||||||+|+++++.|++++ ..++|+++.|+...... ..+. ......+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999984 34899999996432211 1110 01112468899999974
Q ss_pred -HHHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC----
Q 035631 75 -ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES---- 149 (684)
Q Consensus 75 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~---- 149 (684)
.+.+..+. .++|+|||+|+..+.. .........|+.++.+++++|++.+ +++|+|+||.++|+......
T Consensus 1051 ~~~~~~~l~--~~~d~iiH~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443 1051 SDEKWSDLT--NEVDVIIHNGALVHWV---YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred CHHHHHHHH--hcCCEEEECCcEecCc---cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhh
Confidence 44555555 6899999999987532 2334455689999999999999876 88999999999997421100
Q ss_pred -----CCCCCCC-----CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHc
Q 035631 150 -----DIGNPEA-----SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMK 215 (684)
Q Consensus 150 -----~~~~~e~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~ 215 (684)
.....|. .+..+.+.|+.+|+.+|.++..+.+. +++++++||+.|||+..... .++..++.....
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence 0001111 12234567999999999999887654 99999999999999865332 234444433332
Q ss_pred CCceEEecCCCceEecccHHHHHHHHHHHHhcCC---CCcEEEecCCCccCHHHHHHHHHHHhCC
Q 035631 216 GQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVAADICTLFKL 277 (684)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~ 277 (684)
.. ..++....++|++++|++++++.++.++. ...+||++++..+++.++++.+.+. |.
T Consensus 1204 ~~---~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~ 1264 (1389)
T TIGR03443 1204 LG---LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GY 1264 (1389)
T ss_pred hC---CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CC
Confidence 22 22344556899999999999999987543 3358999999999999999999764 44
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-20 Score=174.74 Aligned_cols=183 Identities=27% Similarity=0.386 Sum_probs=141.9
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFA 94 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 94 (684)
|+|+||||++|+.++++|+++ +++|+++.|++. +... ..+++++.+|+.|.+.+.+++ .++|+|||++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~--~~~~------~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPS--KAED------SPGVEIIQGDLFDPDSVKAAL--KGADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGG--GHHH------CTTEEEEESCTTCHHHHHHHH--TTSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCch--hccc------ccccccceeeehhhhhhhhhh--hhcchhhhhh
Confidence 799999999999999999999 799999999853 2211 568999999999999999999 6999999999
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 035631 95 AQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174 (684)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 174 (684)
+.... +...+++++++|++++ ++|+|++||..+|+....... .. .......|...|...|+
T Consensus 69 ~~~~~-------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~e~ 129 (183)
T PF13460_consen 69 GPPPK-------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFS---DE--DKPIFPEYARDKREAEE 129 (183)
T ss_dssp HSTTT-------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEE---GG--TCGGGHHHHHHHHHHHH
T ss_pred hhhcc-------------cccccccccccccccc-cccceeeeccccCCCCCcccc---cc--cccchhhhHHHHHHHHH
Confidence 75432 1777899999999987 999999999999985443211 00 01111468888888888
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 175 LVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 175 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.++ +.+++|+++||+++||+......+ ....+....++|+.+|+|++++.++++
T Consensus 130 ~~~----~~~~~~~ivrp~~~~~~~~~~~~~---------------~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 130 ALR----ESGLNWTIVRPGWIYGNPSRSYRL---------------IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHH----HSTSEEEEEEESEEEBTTSSSEEE---------------ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHH----hcCCCEEEEECcEeEeCCCcceeE---------------EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 874 349999999999999986421111 111334456999999999999998864
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=179.83 Aligned_cols=235 Identities=21% Similarity=0.209 Sum_probs=159.5
Q ss_pred CCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCC-HHHHHHhhc
Q 035631 5 FEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC-ADLMNYLLV 83 (684)
Q Consensus 5 ~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~ 83 (684)
++..+..+|+||||||||+||+.+++.|+++ |++|+++.|+... ...+.. ...+++++.+|+.| .+.+.+.+.
T Consensus 10 ~~~~~~~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~~~~--~~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 10 EDAENVKTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDK--AKTSLP--QDPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred cccccccCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHH--HHHhcc--cCCceEEEEeeCCCCHHHHHHHhh
Confidence 3344556789999999999999999999999 8999999987421 111111 12468899999998 455555541
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC-CCCCCC
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-SQLLPT 162 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~-~~~~p~ 162 (684)
.++|+|||+++..... ++...+++|..++.++++++++.+ +++||++||.++||....... .+. ...++.
T Consensus 84 -~~~d~vi~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~---~~~~~~~~~~ 154 (251)
T PLN00141 84 -DDSDAVICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQIL---NPAYIFLNLF 154 (251)
T ss_pred -cCCCEEEECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCccccc---CcchhHHHHH
Confidence 3799999998864211 122334678889999999999877 899999999999985432111 010 011122
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
..|...|...|++++ +.+++++++||+++++.... + .+...........+++.+|+|+++.
T Consensus 155 ~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~--------------~-~~~~~~~~~~~~~~i~~~dvA~~~~ 215 (251)
T PLN00141 155 GLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPT--------------G-NIVMEPEDTLYEGSISRDQVAEVAV 215 (251)
T ss_pred HHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCC--------------c-eEEECCCCccccCcccHHHHHHHHH
Confidence 234456778777664 34899999999999986421 0 1111111111235799999999999
Q ss_pred HHHhcCC-CCcEEEecCC---CccCHHHHHHHHHH
Q 035631 243 VILHRGV-IGHVYNVGTK---KERSVLDVAADICT 273 (684)
Q Consensus 243 ~~~~~~~-~~~~~ni~~~---~~~t~~e~~~~i~~ 273 (684)
.++..+. .+.++.+.+. ...++.+++..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 216 EALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 9998755 4567888753 24788888877654
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-20 Score=192.74 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=150.3
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCC--eE-----------------------------------eeeeccCCC------hh
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGI--AF-----------------------------------EFGTGRLED------KN 409 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~--~v-----------------------------------~~~~~d~~d------~~ 409 (684)
+|||||||||||++|+++|+++|+ +| .++.+|+++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999983 34 233455543 23
Q ss_pred HHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCC
Q 035631 410 SLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSI 488 (684)
Q Consensus 410 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~ 488 (684)
.+..+..++ |+|||+|+.. + + ........++|+.++.+++++|.+.+++ ++|+||.++|+.....+
T Consensus 81 ~~~~~~~~~--d~vih~a~~~---~--~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~----- 147 (367)
T TIGR01746 81 EWERLAENV--DTIVHNGALV---N--W-VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLST----- 147 (367)
T ss_pred HHHHHHhhC--CEEEeCCcEe---c--c-CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCC-----
Confidence 455555555 9999999965 2 1 2334567789999999999999998875 99999999997543322
Q ss_pred CCccCCCCC----CCCChhhhhhHhHhhhhhHH-hhhhhhhhhhhhhhhHHHHH------HhhhhhhccccccceecCCC
Q 035631 489 GFKEDDEPN----FTRSFYSKTKAMVTFLSYLE-IFVLVICIECLINFQVEGLL------KAYENVCTLRLRMPISSDLS 557 (684)
Q Consensus 489 ~~~e~~~~~----~p~~~Y~~sK~~~E~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~ 557 (684)
..|+++.. .+.+.|+.+|..+|.+.... ..+.++.+.|+..+++.... ..+...+........++...
T Consensus 148 -~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~ 226 (367)
T TIGR01746 148 -VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSP 226 (367)
T ss_pred -ccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCC
Confidence 22222211 14568999999999885432 23666777777755542100 00111111111111111111
Q ss_pred C-CchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCc----cceeEecCCCcccHHHHHHHHHhhcCCcccc
Q 035631 558 N-PRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNC----RGAWNFTNPGVISHNEILELYKEYIDPQLKW 628 (684)
Q Consensus 558 ~-~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~----~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 628 (684)
. .. +++|++|++++++.++.+.. +++||+++++++++.|+++.+.+ +|.+...
T Consensus 227 ~~~~-----------------~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~ 284 (367)
T TIGR01746 227 ELTE-----------------DLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKL 284 (367)
T ss_pred cccc-----------------CcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCc
Confidence 1 22 34999999999999987653 56999999999999999999998 7765543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=176.91 Aligned_cols=227 Identities=17% Similarity=0.150 Sum_probs=157.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++.++||||||+|+||++++++|+++ |++|++++|+... ....+. .......+.++.+|+.|.+.+..++..
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAA-EADALAAELNALRPGSAAALQADLLDPDALPELVAACV 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH-HHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999 8999999986321 111110 011123578899999999988877743
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++... .....++.+|+.. +
T Consensus 81 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~ 146 (249)
T PRK09135 81 AAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--------------A 146 (249)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--------------h
Confidence 36899999999653221 22345678899999999999999642 1124566655421 1
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+..+.+.|+.+|..+|.+++.+++++ +++++++||+.++|+.... .+...+......+.++. .+.+
T Consensus 147 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~ 216 (249)
T PRK09135 147 ERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN-SFDEEARQAILARTPLK---------RIGT 216 (249)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc-cCCHHHHHHHHhcCCcC---------CCcC
Confidence 2345667889999999999999988775 5899999999999997532 22222222232222211 1234
Q ss_pred HHHHHHHHHHHHhcC--CCCcEEEecCCCccC
Q 035631 234 CADVAEAFDVILHRG--VIGHVYNVGTKKERS 263 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~--~~~~~~ni~~~~~~t 263 (684)
++|+++++..++... ..+++||++++...+
T Consensus 217 ~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 217 PEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 799999996666432 357899999987654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=161.60 Aligned_cols=299 Identities=19% Similarity=0.167 Sum_probs=216.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
..+||||||-|.+|..++..|........|+..+-..+. ..-...--++..|+.|...+++.+....+|.+|
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--------~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--------ANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--------hhhcccCCchhhhhhccccHHHhhcccccceee
Confidence 479999999999999999999888644455555543211 111123346788999999999999888999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|..+..+. -.+.+-..+..+|+.|..|+++.|++.+ -++...||.+.||...... +...-.-..|.+.||.||..
T Consensus 116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSPRN--PTPdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSPRN--PTPDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCCCC--CCCCeeeecCceeechhHHH
Confidence 99886542 2345566788999999999999999976 5777789999999865432 22333456789999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCC---CCCCCCh-HHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGP---NQFPEKL-IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
+|.+-+.+....++++-.+|++.++.. +.....+ +..+..+.++|+ ...+-.++.+..+.|.+|+-++++.++..
T Consensus 191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk-~tCylrpdtrlpmmy~~dc~~~~~~~~~a 269 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGK-HTCYLRPDTRLPMMYDTDCMASVIQLLAA 269 (366)
T ss_pred HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCC-cccccCCCccCceeehHHHHHHHHHHHhC
Confidence 999998888888999999999888864 2222233 334444555555 44445567888999999999999988875
Q ss_pred CC---CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC---CCCCcceecCHHHHHh-cCCcccCCHHHHHHH
Q 035631 248 GV---IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR---PFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKL 320 (684)
Q Consensus 248 ~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~ 320 (684)
+. ..++||++ +-.+|-+|+++.+.+... ...+.+.+.. .....+..+|.+.++. +.|+..+.+-.-+.-
T Consensus 270 ~~~~lkrr~ynvt-~~sftpee~~~~~~~~~p---~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~ 345 (366)
T KOG2774|consen 270 DSQSLKRRTYNVT-GFSFTPEEIADAIRRVMP---GFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIIST 345 (366)
T ss_pred CHHHhhhheeeec-eeccCHHHHHHHHHhhCC---CceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHH
Confidence 43 46799999 678999999999999873 2233333221 1223445677776665 899888877766666
Q ss_pred HHHHHHhC
Q 035631 321 TLEWYKKN 328 (684)
Q Consensus 321 ~i~~~~~~ 328 (684)
++.-.+++
T Consensus 346 ~i~~~~~n 353 (366)
T KOG2774|consen 346 VVAVHKSN 353 (366)
T ss_pred HHHHHHhh
Confidence 66555444
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=176.60 Aligned_cols=223 Identities=18% Similarity=0.154 Sum_probs=159.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++++||||||||+||++++++|+++ |++|+++.|+.... ...+.. .....++.++.+|+.+.+.+..++..
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEA-AEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHH-HHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999 88988877754211 111100 01134688999999999988877643
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||...... ..+.....+++|+.++.++++.+ ++.+ .++||++||...+...
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~--------- 150 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW--------- 150 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC---------
Confidence 37899999999654322 22344567899999999999887 3444 7899999998776332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+++.++.+ .+++++++||+.++|+..... ........ .... ....+
T Consensus 151 -----~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~-~~~~~~~~---~~~~-------~~~~~ 214 (249)
T PRK12825 151 -----PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT-IEEAREAK---DAET-------PLGRS 214 (249)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc-cchhHHhh---hccC-------CCCCC
Confidence 12357999999999998877655 589999999999999864321 11111111 0001 11237
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
++.+|+++++..++.+. ..+++|+++++..
T Consensus 215 ~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~ 247 (249)
T PRK12825 215 GTPEDIARAVAFLCSDASDYITGQVIEVTGGVD 247 (249)
T ss_pred cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence 99999999999999654 3578999998754
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=181.36 Aligned_cols=230 Identities=17% Similarity=0.085 Sum_probs=157.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+..... ...+. .....+.++++|+.|.+.+.+++..
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEIN--KAGGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHH--hcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999752111 11111 1123577899999999988777643
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHH----HHHHHHHH-HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYG----THVLLEAC-KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~----~~~ll~~~-~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||...... .++.....+++|+.+ ++++++++ +..+ .++||++||...+..
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~--------- 150 (262)
T PRK13394 81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEA--------- 150 (262)
T ss_pred HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCC---------
Confidence 35899999999754322 223345667899998 77777777 5544 789999999654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC---CceEEecCCCc
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG---QQLPIHGNGSN 227 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 227 (684)
..+.+.|+.+|...+.+++.++.+ .+++++++||+.++++... ..++......... ....++..+..
T Consensus 151 -----~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T PRK13394 151 -----SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD--KQIPEQAKELGISEEEVVKKVMLGKTV 223 (262)
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh--hhhHhhhhccCCChHHHHHHHHhcCCC
Confidence 123457999999999998888765 4799999999999987531 1111111000000 00001122334
Q ss_pred eEecccHHHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 228 VRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
.++|++++|++++++.++.... .++.|++.++.
T Consensus 224 ~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 224 DGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 5689999999999999997542 36789888764
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=8e-19 Score=174.45 Aligned_cols=224 Identities=17% Similarity=0.102 Sum_probs=159.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++|+||||||+|+||++++++|+++ |++|++++|+..... ...+. .....+.++.+|+.|.+.+..++..
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVE--AAGGKARARQVDVRDRAALKAAVAAGVE 79 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 11111 1123588899999999988887743
Q ss_pred --CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+++.... ....+++...++.|+.++.++++++. +.+ .++||++||...++.
T Consensus 80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~---------- 148 (251)
T PRK12826 80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRV---------- 148 (251)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhcc----------
Confidence 279999999987654 22334456688999999999998874 334 689999999766511
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
+..+...|+.+|...+.+++.++.+ .+++++++||++++|+...... ...+........++ ..+
T Consensus 149 ---~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~ 215 (251)
T PRK12826 149 ---GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG-DAQWAEAIAAAIPL---------GRL 215 (251)
T ss_pred ---CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC-chHHHHHHHhcCCC---------CCC
Confidence 1223457999999999999887654 4899999999999998542111 01111222222211 157
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
++++|+|+++..++... ..+++|++.+|..
T Consensus 216 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 216 GEPEDIAAAVLFLASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred cCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 89999999999988653 2578999987653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=182.28 Aligned_cols=234 Identities=15% Similarity=0.145 Sum_probs=162.3
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC----C-------CCCCCCceEEEecCCCHH
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH----P-------SRASPNFKFLKGDITCAD 76 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~----~-------~~~~~~~~~~~~Dl~d~~ 76 (684)
..+++++||||||+|+||++++++|+++ |++|++++|+... ...+. . .....+++++.+|+.|.+
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ek--l~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQR--AESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 3456689999999999999999999999 8999999997422 11110 0 001235889999999999
Q ss_pred HHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 77 LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 77 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.+..++ .++|+|||++|.... ...+....+.+|+.++.+++++|++.+ ++|||++||.+++.... ..
T Consensus 152 sI~~aL--ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~-------p~- 218 (576)
T PLN03209 152 QIGPAL--GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGF-------PA- 218 (576)
T ss_pred HHHHHh--cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCc-------cc-
Confidence 998888 789999999986532 112345678899999999999999887 89999999987631110 00
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
........|..+|..+|+.+. .++++++++|||+++++..... ....+............+..+|
T Consensus 219 ~~~~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~-----------~t~~v~~~~~d~~~gr~isreD 283 (576)
T PLN03209 219 AILNLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNLTLSEEDTLFGGQVSNLQ 283 (576)
T ss_pred cchhhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccc-----------cccceeeccccccCCCccCHHH
Confidence 012234557778888888875 3599999999999998743210 0011111111111123488999
Q ss_pred HHHHHHHHHhcC--CCCcEEEecCCCccCHHHHHHHHHH
Q 035631 237 VAEAFDVILHRG--VIGHVYNVGTKKERSVLDVAADICT 273 (684)
Q Consensus 237 ~a~~i~~~~~~~--~~~~~~ni~~~~~~t~~e~~~~i~~ 273 (684)
+|++++.++.++ ..+.+|.+.++.......+.+++..
T Consensus 284 VA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ 322 (576)
T PLN03209 284 VAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK 322 (576)
T ss_pred HHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence 999999999854 3467999988765444555555444
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=173.03 Aligned_cols=236 Identities=15% Similarity=0.054 Sum_probs=166.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
++++||||||+|+||++++++|+++ |++|++++|+.. ....+... ....+.++++|+.|.+.+..++.. .
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTA--TLADLAEK-YGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHh-ccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5578999999999999999999999 899999999642 12111111 124578889999999888776543 3
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||..... ..++++...+++|+.++.++++++ ++.+ .+++|++||...+....
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~----------- 144 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFP----------- 144 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCC-----------
Confidence 789999999976432 233456678899999988887775 4444 67999999977664321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCceEEecCCCc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
....|+.+|+..+.+.+.++.+ ++++++++||+.+..+..... .....+....... ..
T Consensus 145 ---~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 212 (275)
T PRK08263 145 ---MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WS 212 (275)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HH
Confidence 2356999999999998887664 589999999998876532100 0111111111110 01
Q ss_pred eEec-ccHHHHHHHHHHHHhcCCCCcEEEecC-CCccCHHHHHHHHHHHh
Q 035631 228 VRSY-LYCADVAEAFDVILHRGVIGHVYNVGT-KKERSVLDVAADICTLF 275 (684)
Q Consensus 228 ~~~~-i~~~D~a~~i~~~~~~~~~~~~~ni~~-~~~~t~~e~~~~i~~~~ 275 (684)
...+ +..+|++++++.+++.+.....|.+++ +..+++.++.+.+.+.-
T Consensus 213 ~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 213 ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE 262 (275)
T ss_pred hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence 1234 789999999999998766554555554 46788899998888753
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-19 Score=191.70 Aligned_cols=222 Identities=14% Similarity=0.140 Sum_probs=143.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVD 436 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 436 (684)
||||||||+||||++|+++|+++||+| +++.+|++|.. +.+++.++ |+|||||+.. .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al~~~--D~VIHLAa~~---~-- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELAGEA--DAVIHLAPVD---T-- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHhcCC--CEEEEcCccC---c--
Confidence 599999999999999999999999976 35677888874 66667665 9999999843 1
Q ss_pred ccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhH
Q 035631 437 WCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 437 ~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
.. ..++|+.++.|++++|++.++++||+||. ||. + ..|. .+|.+...
T Consensus 73 ---~~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~----~-----------------~~~~----~aE~ll~~ 119 (699)
T PRK12320 73 ---SA---PGGVGITGLAHVANAAARAGARLLFVSQA--AGR----P-----------------ELYR----QAETLVST 119 (699)
T ss_pred ---cc---hhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCC----C-----------------cccc----HHHHHHHh
Confidence 11 12589999999999999999999999986 331 0 0111 24543221
Q ss_pred HhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC
Q 035631 517 EIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN 596 (684)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~ 596 (684)
...+..+.|+.++||.+...... .++..+++.. ....+...||++|++++++.+++..
T Consensus 120 --~~~p~~ILR~~nVYGp~~~~~~~-------------------r~I~~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~ 177 (699)
T PRK12320 120 --GWAPSLVIRIAPPVGRQLDWMVC-------------------RTVATLLRSK-VSARPIRVLHLDDLVRFLVLALNTD 177 (699)
T ss_pred --cCCCEEEEeCceecCCCCcccHh-------------------HHHHHHHHHH-HcCCceEEEEHHHHHHHHHHHHhCC
Confidence 22455666666555432111100 1222222110 0011112389999999999999876
Q ss_pred ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhhhhcCCCchhHH
Q 035631 597 CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPEVLSIK 665 (684)
Q Consensus 597 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~~~~~~~~~~~ 665 (684)
..|+||+++++.+|+.|+++.+... .+...+.+.... .. . .+-++..+...+|.+..+|+
T Consensus 178 ~~GiyNIG~~~~~Si~el~~~i~~~-~p~~~~~~~~~~-----~~--~-~pdi~~a~~~~~w~~~~~~~ 237 (699)
T PRK12320 178 RNGVVDLATPDTTNVVTAWRLLRSV-DPHLRTRRVRSW-----EQ--L-IPEVDIAAVQEDWNFEFGWQ 237 (699)
T ss_pred CCCEEEEeCCCeeEHHHHHHHHHHh-CCCccccccccH-----HH--h-CCCCchhhhhcCCCCcchHH
Confidence 6689999999999999998888665 322222211111 01 1 22334444577787777774
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=170.40 Aligned_cols=223 Identities=20% Similarity=0.188 Sum_probs=153.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
++||||||+|+||++++++|+++ |++|++++|+... .+.+... ....++..+.+|+.|.+++..++.. .
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAG--AEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999 8899999997421 1111110 1124688899999999976655422 4
Q ss_pred CCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+++....... ..+....++.|+.++..+++++ ++.+ ++++|++||...+....
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~----------- 145 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASP----------- 145 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCC-----------
Confidence 68999999997543221 1223456778999988887776 4444 78999999976553221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceE-------EecCCCc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLP-------IHGNGSN 227 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 227 (684)
....|+.+|...|.+++.++.+ .+++++++||+.++++... ..+.. .. ....+. ....+..
T Consensus 146 ---~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~--~~~~~---~~-~~~~~~~~~~~~~~~~~~~~ 216 (255)
T TIGR01963 146 ---FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE--KQIAD---QA-KTRGIPEEQVIREVMLPGQP 216 (255)
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH--HHHHh---hh-cccCCCchHHHHHHHHccCc
Confidence 1356999999999998877654 3899999999999987421 11111 10 001000 0112334
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+++++++|+|++++.++... ..++.|++.++.
T Consensus 217 ~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 217 TKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred cccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 568999999999999999753 246789998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.3e-18 Score=167.28 Aligned_cols=234 Identities=18% Similarity=0.150 Sum_probs=164.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|++++|||||+|+||+++++.|+++ |++|++++|+... ...+.......+++.+.+|+.|.+.+..++.. .
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAA--LAAFADALGDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999999999999 8999999997421 11111111224678899999999988776643 2
Q ss_pred CCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||++|........ +.....+.+|+.++.++++++. +.+ ..++|++||...+...
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------ 143 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL------------ 143 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC------------
Confidence 589999999975432111 1223456789999988888873 333 5789999996443211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|...+.+++.++.+. +++++.+||++++++..... ...+.+....... ...+++++
T Consensus 144 ---~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 211 (257)
T PRK07074 144 ---GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFAT 211 (257)
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCC
Confidence 11359999999999998887664 68999999999988743110 0111222222111 12257899
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHH
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICT 273 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~ 273 (684)
++|+++++..++... ..+..+++.++......|+++.+..
T Consensus 212 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 212 PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 999999999999653 2467889998999999999987754
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7e-18 Score=170.07 Aligned_cols=242 Identities=14% Similarity=0.102 Sum_probs=167.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.......++.++.+|+.|.+.+..++..
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 899999998642111 11111111124678889999999988777643
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG---QVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... ....++....+++|+.++.++++++.+.. ...+|+++||...+...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 153 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH--------- 153 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------
Confidence 278999999996421 12223345678899999999988775421 14689999997764321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+.+.|+.+|...|.+++.+..+. +++++++||+.+.++...................+ ...+
T Consensus 154 -----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~ 219 (276)
T PRK05875 154 -----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRV 219 (276)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCC
Confidence 234679999999999999887664 68899999999877643111001111111111111 1245
Q ss_pred ccHHHHHHHHHHHHhcCC---CCcEEEecCCCcc----CHHHHHHHHHHHhC
Q 035631 232 LYCADVAEAFDVILHRGV---IGHVYNVGTKKER----SVLDVAADICTLFK 276 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~----t~~e~~~~i~~~~g 276 (684)
++++|+|+++..++..+. .++++++.++..+ +..|+++.+.+..+
T Consensus 220 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 220 GEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred cCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 779999999999997643 4789999988775 77888777766544
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-19 Score=188.58 Aligned_cols=225 Identities=14% Similarity=0.096 Sum_probs=156.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCe------------------------------------------------Eeeee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIA------------------------------------------------FEFGT 402 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~------------------------------------------------v~~~~ 402 (684)
.++|||||||||+|++|++.|++.+.+ +..+.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 359999999999999999999976542 23366
Q ss_pred ccCCCh------hHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecce
Q 035631 403 GRLEDK------NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGC 474 (684)
Q Consensus 403 ~d~~d~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~ 474 (684)
+|+++. +..+.+.++ +|+|||+|+.. +. ..++....++|+.|+.+++++|.+.+ . ++||+||++
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v---~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKE--VDVIINSAANT---TF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhc--CCEEEECcccc---cc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 788876 344444554 59999999965 21 25677899999999999999999864 4 599999999
Q ss_pred eeecCCCCCCCCCCCCc-----------------------------------cC--C----------------CCCCCCC
Q 035631 475 IYEYDSMHPQGSSIGFK-----------------------------------ED--D----------------EPNFTRS 501 (684)
Q Consensus 475 vy~~~~~~~~~~~~~~~-----------------------------------e~--~----------------~~~~p~~ 501 (684)
|||...+.. .|. ++. +. . ....-.+
T Consensus 271 VyG~~~G~i-~E~-~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN 348 (605)
T PLN02503 271 VNGQRQGRI-MEK-PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD 348 (605)
T ss_pred eecCCCCee-eee-ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC
Confidence 998654221 111 011 00 0 0000136
Q ss_pred hhhhhhHhHhhhhhHHhhhhhhhhhhhhhhh----------HHH--H-HHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 502 FYSKTKAMVTFLSYLEIFVLVICIECLINFQ----------VEG--L-LKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~----------~~~--~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.|..||.+||++...+...+++.+.|+..+. +++ . .+.+.. ...+.-..+.++++...|+
T Consensus 349 tYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~-~g~G~lr~~~~~~~~~~Di------ 421 (605)
T PLN02503 349 TYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLY-YGKGQLTGFLADPNGVLDV------ 421 (605)
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhh-eeccceeEEEeCCCeeEeE------
Confidence 7999999999998777778899999999772 122 1 111111 1111112244566666666
Q ss_pred cccccccCCCccchhhHHHHHHHHHhc-C-----ccceeEecCC--CcccHHHHHHHHHhhcC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARR-N-----CRGAWNFTNP--GVISHNEILELYKEYID 623 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~-~-----~~g~~ni~~~--~~~s~~e~~~~i~~~~g 623 (684)
|+||.++.+++.++.. . ...+||++++ .++++.++.+.+.+.+.
T Consensus 422 -----------VPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~ 473 (605)
T PLN02503 422 -----------VPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK 473 (605)
T ss_pred -----------EeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence 9999999999988431 1 2459999988 79999999999987665
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=167.90 Aligned_cols=222 Identities=17% Similarity=0.146 Sum_probs=154.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. ....... .....++.++.+|+.+.+++..++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVE--KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45579999999999999999999999 899999988642 1111110 01123577889999999998877642
Q ss_pred --CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||....... ++.....+++|+.++.++++++.. .+ ..+||++||...|...
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~--------- 153 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQR--------- 153 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC---------
Confidence 368999999997543222 223445679999999999888752 23 5689999998766422
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCC-CC-CCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPN-QF-PEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.+...|+.+|.+.|.+++.++.+. +++++++|||.+.++. .. ....+..+....... + ....+
T Consensus 154 -----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~ 221 (274)
T PRK07775 154 -----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHD 221 (274)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccc
Confidence 123579999999999999887664 8999999999886542 21 111122222221110 1 11234
Q ss_pred ecccHHHHHHHHHHHHhcCCCCcEEEec
Q 035631 230 SYLYCADVAEAFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~~~~~ni~ 257 (684)
.+++++|+|++++.++.++..+.+||+.
T Consensus 222 ~~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 222 YFLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred cccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 6899999999999999876556678875
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.2e-18 Score=167.39 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=158.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++++||||||+|+||++++++|+++ |++|++++|.... ...+... ....++..+.+|+.+.+++..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEG--AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35589999999999999999999999 8999999996421 1111110 1123567889999999987766542
Q ss_pred --CCCCEEEEcCccCCc-------CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-------DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|+|||+||.... ...++.....+++|+.++.++++++... .+.++||++||...|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------- 150 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------- 150 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---------
Confidence 268999999997531 1222345567889999999999988753 1246999999987763
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+.+.|+.+|++.|.+++.+++++ ++.+++++||.+..+..... ....+.....++.+..
T Consensus 151 --------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~--------- 212 (250)
T PRK07774 151 --------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV-TPKEFVADMVKGIPLS--------- 212 (250)
T ss_pred --------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc-CCHHHHHHHHhcCCCC---------
Confidence 23569999999999999887764 78899999999887653211 1122233333332221
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
-+..++|++++++.++... ..+++|++.+++.++
T Consensus 213 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 213 RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 2356899999999988753 357899999886543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.5e-18 Score=166.18 Aligned_cols=223 Identities=19% Similarity=0.141 Sum_probs=157.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+|++++||||||+|+||+++++.|+++ |++|++++|+..... .+.. .....++.++.+|+.|.+.+..++..
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAE--ALAAELRAAGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 889999999742211 1100 01234578888999999888776642
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|+|||++|...... ..+.....++.|+.++.++++++. +.+ .++||++||.....
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~---------- 146 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT---------- 146 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc----------
Confidence 36799999999754322 112335568899999999988884 344 68999999965432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
+..+...|+.+|...|.+++.++++ .+++++++||+.++++... .+............ ....
T Consensus 147 ----~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~--~~~~~~~~~~~~~~---------~~~~ 211 (246)
T PRK05653 147 ----GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE--GLPEEVKAEILKEI---------PLGR 211 (246)
T ss_pred ----CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh--hhhHHHHHHHHhcC---------CCCC
Confidence 1123457999999999998887654 4789999999999998642 11112221111111 1145
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+++.+|+++++..++... ..+..|++.+|..
T Consensus 212 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 212 LGQPEEVANAVAFLASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence 788999999999998653 2468899987753
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=168.87 Aligned_cols=230 Identities=16% Similarity=0.111 Sum_probs=156.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
++++||||||+|+||+++++.|+++ |++|++++|+...... ..+........++++.+|+.|.+++.. +..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence 4578999999999999999999999 8999999986421110 001111113468899999999988765 322
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||...... ..++....+.+|+.++.++++++ ++.+ ..+||++||...+..
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~----------- 146 (280)
T PRK06914 79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVG----------- 146 (280)
T ss_pred cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCC-----------
Confidence 36899999999754322 12334566789999988888885 4444 689999998644211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCC-----------ChHHHHHHHHHcCCceEE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPE-----------KLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~~ 221 (684)
..+...|+.+|...+.+++.++. .++++++++|||.+.++..... .........+....
T Consensus 147 ---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (280)
T PRK06914 147 ---FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI---- 219 (280)
T ss_pred ---CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH----
Confidence 12345799999999999888763 4589999999999988732100 00111111111000
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHH
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVL 265 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~ 265 (684)
. .....+++++|+|+++..++.++.....|+++++..+++.
T Consensus 220 -~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 220 -N--SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred -h--hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 0 1123568899999999999998776667999877655444
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=168.45 Aligned_cols=226 Identities=19% Similarity=0.123 Sum_probs=152.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||++++++|+++ |++|++++|+.... ..+.. .....++.++.+|+.|.+.+..++..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAA--AAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3478999999999999999999999 89999999975321 11110 01234688899999999998777642
Q ss_pred -CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHH----HHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGT----HVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~----~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+|+........ ......++.|+.++ +.++.++++.+ .++||++||...+..
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~----------- 146 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVG----------- 146 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccC-----------
Confidence 2699999999975433222 22334667888884 44555555555 789999999755432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCce-----EEecCCCc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQL-----PIHGNGSN 227 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 227 (684)
..+.+.|+.+|...+.+.+.++.+ .+++++++||+.++++.... .+...... .+.+. ..+.....
T Consensus 147 ---~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~ 219 (258)
T PRK12429 147 ---SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKE--RGISEEEVLEDVLLPLVP 219 (258)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccc--cCCChHHHHHHHHhccCC
Confidence 123467999999999888877654 37889999999999875311 11110000 00000 00112223
Q ss_pred eEecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.+.+++++|+|+++..++.... .++.|++.+|
T Consensus 220 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 220 QKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred ccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 3579999999999999986532 4678988866
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=176.96 Aligned_cols=223 Identities=13% Similarity=0.046 Sum_probs=155.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. ........ ....++.++.+|+.|.+.+..++..
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~ 79 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQD--ALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE 79 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999998642 11111110 1123577899999999988877642
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCC-----CcEEEEEeCcccccCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQ-----VKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~-----~~~~i~~SS~~vyg~~~~~~ 149 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++ .+.+. ..++|++||...+...
T Consensus 80 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---- 155 (287)
T PRK06194 80 RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP---- 155 (287)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----
Confidence 26899999999865422 22344556889999999977773 44432 1589999997766422
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC-----CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG-----LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.+...|+.+|...|.+++.+..+++ +++..+.|+.+..+ +.....+++..+.++
T Consensus 156 ----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~-----------~~~~~~~~~~~~~~~ 214 (287)
T PRK06194 156 ----------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG-----------IWQSERNRPADLANT 214 (287)
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc-----------cccccccCchhcccC
Confidence 1235799999999999988877654 44455556544332 111223445566677
Q ss_pred CCceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFK 276 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g 276 (684)
+.+.++|++++|++..+.... .++..|+++.+.+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~ 251 (287)
T PRK06194 215 APPTRSQLIAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIR 251 (287)
T ss_pred ccccchhhHHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHH
Confidence 778889999999887753221 1789999999988764
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=166.51 Aligned_cols=225 Identities=17% Similarity=0.145 Sum_probs=156.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
|+++||||||+|+||++++++|+++ |++|++++|+............ ....++.++.+|+.+.+.+..++..
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3478999999999999999999999 8999999986422111100000 1124688999999999887766532
Q ss_pred CCCCEEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHHhc----C-----CCcEEEEEeCcccccCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACKLT----G-----QVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-----~~~~~i~~SS~~vyg~~~~~~ 149 (684)
..+|+|||+||..... ...+.+...+++|+.++.++++++... . ...+||++||...+...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 154 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---- 154 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----
Confidence 3689999999975321 122445567899999999998887542 1 14679999997654321
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
.+.+.|+.+|.+.|.+++.++.+ ++++++++||+.+.++... .....+....... ..+
T Consensus 155 ----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~--~~~~~~~~~~~~~-~~~------ 215 (256)
T PRK12745 155 ----------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA--PVTAKYDALIAKG-LVP------ 215 (256)
T ss_pred ----------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc--ccchhHHhhhhhc-CCC------
Confidence 23457999999999999888754 5899999999999887432 1222222222111 111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+.+.+|+++++..++... ..+..|++.++..
T Consensus 216 -~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 216 -MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred -cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence 135678999999999888653 3578999987754
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-18 Score=171.25 Aligned_cols=234 Identities=19% Similarity=0.164 Sum_probs=160.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ....+.++.+|+.|.+.+..++..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPA--RARLAALE-IGPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHH--HHHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999999999999999999999 899999998642 11111111 123578899999999998877643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+|+..... ...++....+++|+.++.++++++... +...++|++||.....
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 145 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------- 145 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-------------
Confidence 3799999999975432 123445667899999999999998642 1125899999954211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
+..+...|+.+|...+.+.+.++.+ +++++++++|+.++++..... ..+..... ...+......+.+...+.+.
T Consensus 146 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (257)
T PRK07067 146 -GEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYEN-RPPGEKKRLVGEAVPLGRMG 223 (257)
T ss_pred -CCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccC-CCHHHHHHHHhhcCCCCCcc
Confidence 1124467999999999999887764 589999999999998742110 00110000 00000001112223345789
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
+.+|+|+++..++... ..+++|++.+|+.++
T Consensus 224 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 224 VPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred CHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 9999999999999754 257899999886543
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=164.58 Aligned_cols=221 Identities=18% Similarity=0.201 Sum_probs=152.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc-ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL-KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+...... ..+. .....+.++.+|+.+.+++..++..
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELR--AAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHH--hcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999986421111 1111 1123577889999998887766542
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... .....+....+++|+.++..+++.+ ++.+ ..++|++||...|+.
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~---------- 150 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGI---------- 150 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCC----------
Confidence 379999999985321 1223345566788888776555444 4444 579999999876532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC-----------CCChHHHHHHHHHcCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF-----------PEKLIPKFILLAMKGQQLP 220 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~ 220 (684)
+..+|+.+|.+.+.+.+.++.+. ++++++++|++++++... .....+.+........++.
T Consensus 151 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T PRK12823 151 ------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK 224 (260)
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence 12369999999999999887665 899999999999997310 0122333333333333222
Q ss_pred EecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 221 IHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 221 ~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
-+.+.+|+|++++.++... ..++.+++.+++
T Consensus 225 ---------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 225 ---------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred ---------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 2346899999999988653 256789998764
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=165.36 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=153.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
++++||||||+|+||++++++|+++ |++|++++|+.. ....+... ...++..+.+|+.|.+.+..++.. .
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEA--ARADFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHH--HHHHHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999 899999999642 22222111 124678889999999988777642 2
Q ss_pred CCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|+|||+||......... .....+++|+.++.++++++. +.+ .+++|++||...+...
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~------------ 144 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITM------------ 144 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCC------------
Confidence 6899999999754322222 234568999999999999853 333 5799999997654321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-----ChHHHHHHHHHcCCceEEecCCCceE
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-----KLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.+...|+.+|...|.+++.++.+ ++++++++||+++.++..... ..+..................+ .
T Consensus 145 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 219 (277)
T PRK06180 145 --PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---K 219 (277)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---C
Confidence 23467999999999998887655 489999999999977532110 1111111100000000000011 2
Q ss_pred ecccHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRGVIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~ 260 (684)
.+..++|+|++++.++..+.....|.++...
T Consensus 220 ~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~ 250 (277)
T PRK06180 220 QPGDPAKAAQAILAAVESDEPPLHLLLGSDA 250 (277)
T ss_pred CCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence 3567899999999999877665556666443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-17 Score=163.03 Aligned_cols=223 Identities=16% Similarity=0.114 Sum_probs=152.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCC-CC-CCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLH-PS-RASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+++++|+||||+|+||++++++|+++ |++|+++ .|+.. ...... .. .....+.++.+|+.|.+.+..++..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQ--AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 34589999999999999999999999 8888775 55431 111110 00 1124578899999999998877643
Q ss_pred ---------CCCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCC
Q 035631 85 ---------EGIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 85 ---------~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.++|+|||+||........+ .....+++|+.++.++++++... ....++|++||..++...
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~----- 154 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF----- 154 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----
Confidence 26999999999754322222 23456789999999999998763 123689999998776422
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.+...|+.+|.+.|.+.+.++.+ .++++++++|+.++++.......-..+........ .
T Consensus 155 ---------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~ 216 (254)
T PRK12746 155 ---------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS---------V 216 (254)
T ss_pred ---------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC---------C
Confidence 23456999999999998777654 47999999999998874310000011111111111 1
Q ss_pred eEecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
...+++++|+++++..++..+. .+++|++.++
T Consensus 217 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 217 FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 1356789999999988887542 4689999866
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=164.68 Aligned_cols=227 Identities=17% Similarity=0.102 Sum_probs=158.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+... ...+... ....++..+.+|+.|.+.+..++..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAK--LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 8999999997421 1111100 1123477889999999988877643
Q ss_pred --CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|+|||+||....... .+.....+++|+.++.++++++.+. ...+++|++||...+.
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------ 151 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL------------ 151 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc------------
Confidence 358999999997543222 2233567789999999999988743 1257999999964431
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
+..+...|+.+|...|.+++.++.+ +++++.++||+.+.++........+.+...+....+ ...+.
T Consensus 152 --~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 220 (255)
T PRK07523 152 --ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWG 220 (255)
T ss_pred --CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCc
Confidence 1223467999999999999888753 589999999999998743110000112222222211 12457
Q ss_pred cHHHHHHHHHHHHhcCC---CCcEEEecCCCccC
Q 035631 233 YCADVAEAFDVILHRGV---IGHVYNVGTKKERS 263 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~t 263 (684)
.++|+|+++..++.... .++.+++.++..+|
T Consensus 221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 221 KVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred CHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 79999999999996532 46789998776544
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-18 Score=168.61 Aligned_cols=221 Identities=22% Similarity=0.282 Sum_probs=158.4
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEcC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFA 94 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 94 (684)
|+|+||||.+|+++++.|++. +++|.++.|+.+......+. ..+++++.+|+.|.+.+.+++ .++|.||.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~~al--~g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLVAAL--KGVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHHHHH--TTCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHHHHH--cCCceEEeec
Confidence 799999999999999999997 89999999986433333222 247889999999999999999 8999999887
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 035631 95 AQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174 (684)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 174 (684)
+.... . ......+++++|+++| +++||+.|....+. +.....|...+-..|...|+
T Consensus 73 ~~~~~-----~-------~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~-----------~~~~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 73 PPSHP-----S-------ELEQQKNLIDAAKAAG-VKHFVPSSFGADYD-----------ESSGSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp SCSCC-----C-------HHHHHHHHHHHHHHHT--SEEEESEESSGTT-----------TTTTSTTHHHHHHHHHHHHH
T ss_pred Ccchh-----h-------hhhhhhhHHHhhhccc-cceEEEEEeccccc-----------ccccccccchhhhhhhhhhh
Confidence 75431 1 2556689999999999 99999766543331 11122233345567888887
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHH--HHHcC-CceEEecCCCceEecc-cHHHHHHHHHHHHhcCCC
Q 035631 175 LVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFIL--LAMKG-QQLPIHGNGSNVRSYL-YCADVAEAFDVILHRGVI 250 (684)
Q Consensus 175 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~i-~~~D~a~~i~~~~~~~~~ 250 (684)
.+++ .+++++++|++..+.... ..+.. ..... ..+.++++++....++ ..+|+++++..++..+..
T Consensus 129 ~l~~----~~i~~t~i~~g~f~e~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~ 198 (233)
T PF05368_consen 129 YLRE----SGIPYTIIRPGFFMENLL------PPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK 198 (233)
T ss_dssp HHHH----CTSEBEEEEE-EEHHHHH------TTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred hhhh----ccccceeccccchhhhhh------hhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence 7754 499999999997664311 11111 11112 2366777777666675 999999999999987543
Q ss_pred ---CcEEEecCCCccCHHHHHHHHHHHhCCC
Q 035631 251 ---GHVYNVGTKKERSVLDVAADICTLFKLE 278 (684)
Q Consensus 251 ---~~~~ni~~~~~~t~~e~~~~i~~~~g~~ 278 (684)
++.+.+++ +.+|..|+++.+.+.+|.+
T Consensus 199 ~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 199 HNNGKTIFLAG-ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp TTEEEEEEEGG-GEEEHHHHHHHHHHHHTSE
T ss_pred hcCCEEEEeCC-CCCCHHHHHHHHHHHHCCc
Confidence 46777764 8899999999999999975
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=166.17 Aligned_cols=228 Identities=17% Similarity=0.137 Sum_probs=159.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++..+.........+... ....++.++.+|+.+.+.+.+++..
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 8999887664321111111100 1123567889999999888776643
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||.... +.+.+++...+++|+.++.++++++... ..-.++|++||...|....
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 200 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP---------- 200 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence 379999999996432 1233456778999999999999999753 1136999999988774322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|.+.+.+++.++.+ .++++.+++||.+.++...................+ ...+..
T Consensus 201 ----~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ 267 (300)
T PRK06128 201 ----TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQ 267 (300)
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcC
Confidence 2245999999999999888766 489999999999999853211111222222222111 124567
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEecCCCcc
Q 035631 234 CADVAEAFDVILHRGV---IGHVYNVGTKKER 262 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~ 262 (684)
.+|++.++..++.... .++.|++.+|..+
T Consensus 268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 8999999998886532 4688999887543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.9e-18 Score=166.85 Aligned_cols=229 Identities=15% Similarity=0.100 Sum_probs=154.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
++.++||||||+|+||+++++.|+++ |++|++++|+... ....+.. .....++.++.+|+.+.+.+..++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAP-RANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchH-hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 8999999886421 1111100 00123578889999999988776642
Q ss_pred --CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
.++|+|||+|+.... ...++...+++|+.++.++++++.+.- ...++|++||........ .+. ...
T Consensus 81 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~--~~~ 149 (248)
T PRK07806 81 EFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKT--MPE 149 (248)
T ss_pred hCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccC--Ccc
Confidence 369999999986432 223455678899999999999998642 135899999954321100 011 112
Q ss_pred CChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
...|+.+|...|.+++.++.+ .++++++++|+.+-++.. ..+.... .+-...........+++++|+|
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~~~dva 220 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT------ATLLNRL---NPGAIEARREAAGKLYTVSEFA 220 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh------hhhhccC---CHHHHHHHHhhhcccCCHHHHH
Confidence 468999999999999888655 478889998887665421 1111000 0000000000113689999999
Q ss_pred HHHHHHHhcC-CCCcEEEecCCCc
Q 035631 239 EAFDVILHRG-VIGHVYNVGTKKE 261 (684)
Q Consensus 239 ~~i~~~~~~~-~~~~~~ni~~~~~ 261 (684)
++++.+++.. ..+++|++++++.
T Consensus 221 ~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 221 AEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred HHHHHHhhccccCccEEEecCccc
Confidence 9999999865 4678899998764
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=162.89 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=152.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++||||||+|+||++++++|+++ |++|++++|+..... .........+.+.+.+|+.|.+++..+++. .
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLS--QTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHH--HHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4589999999999999999999999 899999999652211 100111123567888999999888776642 2
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+++...... ..+.....+..|+.++.++++++. +.+ .+++|++||...++..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------ 148 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG------------ 148 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC------------
Confidence 7999999999653221 122334567899999999988875 334 7899999998876432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.+...|+.+|...+.+++.++.. .++++.++||++++++..... .. . .....++++
T Consensus 149 --~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---------------~~--~--~~~~~~~~~ 207 (239)
T PRK12828 149 --PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD---------------MP--D--ADFSRWVTP 207 (239)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc---------------CC--c--hhhhcCCCH
Confidence 12356999999998888776544 489999999999998732100 00 0 011247899
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEecCCCc
Q 035631 235 ADVAEAFDVILHRGV---IGHVYNVGTKKE 261 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~---~~~~~ni~~~~~ 261 (684)
+|+|+++..++.+.. .++.+++.+++.
T Consensus 208 ~dva~~~~~~l~~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 208 EQIAAVIAFLLSDEAQAITGASIPVDGGVA 237 (239)
T ss_pred HHHHHHHHHHhCcccccccceEEEecCCEe
Confidence 999999999997542 467888877653
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-17 Score=160.64 Aligned_cols=223 Identities=14% Similarity=0.103 Sum_probs=155.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++++||||+|+||++++++|+++ |++|+++.++.. .....+... ....++.++.+|+.+.+.+.+++..
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSK-EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcH-HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 889987655321 111111100 1123578899999999998877743
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|+|||+||...... .++.....+++|+.++.++++++... ....++|++||...+...
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 150 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---------- 150 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC----------
Confidence 35899999999754321 22456677899999999999988642 124699999996443211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|.+.+.+.+.+..+. ++++++++|+.+.++... ............. ...+.+.
T Consensus 151 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~---------~~~~~~~ 215 (247)
T PRK12935 151 ----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA--EVPEEVRQKIVAK---------IPKKRFG 215 (247)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh--hccHHHHHHHHHh---------CCCCCCc
Confidence 234579999999998887776553 899999999999875321 1111111111111 1234679
Q ss_pred cHHHHHHHHHHHHhcC--CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG--VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~--~~~~~~ni~~~~ 260 (684)
+++|++++++.+++.. ..++.||+.++.
T Consensus 216 ~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 216 QADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred CHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 9999999999998754 357899998764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-17 Score=164.40 Aligned_cols=229 Identities=16% Similarity=0.124 Sum_probs=153.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||+|+||++++++|+++ |++|++++|+.. ....+.......++.++.+|+.|.+.+..++..
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEA--ALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 899999999642 111111111111568899999999988776643
Q ss_pred CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCC-cEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQV-KRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~-~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||++|.... ....++....++.|+.++.++++++. ..+ . ++++++||......
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~---------- 153 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLG---------- 153 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccC----------
Confidence 379999999997621 22223456788999999999888873 333 3 67888887543211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEE----ecCCCc
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI----HGNGSN 227 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 227 (684)
..+...|+.+|...|.+++.++.+ .+++++++||++++|+... ...+...... +..... ......
T Consensus 154 ----~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~ 225 (264)
T PRK12829 154 ----YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR--RVIEARAQQL--GIGLDEMEQEYLEKIS 225 (264)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH--HHhhhhhhcc--CCChhHHHHHHHhcCC
Confidence 112346999999999999887655 3799999999999998531 1111100000 000000 000011
Q ss_pred eEecccHHHHHHHHHHHHhc---CCCCcEEEecCCCc
Q 035631 228 VRSYLYCADVAEAFDVILHR---GVIGHVYNVGTKKE 261 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~---~~~~~~~ni~~~~~ 261 (684)
...+++++|+++++..++.. ...++.|++.++..
T Consensus 226 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 226 LGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred CCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 23589999999999888754 23578899988753
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.6e-18 Score=151.67 Aligned_cols=261 Identities=12% Similarity=0.079 Sum_probs=184.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-e-E----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-A-F----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~-v----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
-||||||+-|.+|..+++.|..+.- + | .++..|+.|...+++++-..++|..||+.+..
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL--- 121 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL--- 121 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHH---
Confidence 3899999999999999999987632 1 1 56778999999999999998999999998866
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
....+.+.....++|++|..|+++.+++++.++++.||.+.||++++.. |-.+-+.. +|++.||.||..||.+
T Consensus 122 -SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRN-----PTPdltIQ-RPRTIYGVSKVHAEL~ 194 (366)
T KOG2774|consen 122 -SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRN-----PTPDLTIQ-RPRTIYGVSKVHAELL 194 (366)
T ss_pred -HHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCC-----CCCCeeee-cCceeechhHHHHHHH
Confidence 3455788889999999999999999999999999999999999776542 12233344 4999999999999998
Q ss_pred hhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCC--CchHHHHhhhcccccc-----cCCCccchhhHH
Q 035631 514 SYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSN--PRNFVTKLARYNKVVN-----IPNSMTVLDEML 586 (684)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~i~v~D~~ 586 (684)
-....+..++..+++++.+ .+ .-...|+|.. ....++..+++|+..- +....+|..|+.
T Consensus 195 GEy~~hrFg~dfr~~rfPg----------~i----s~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~ 260 (366)
T KOG2774|consen 195 GEYFNHRFGVDFRSMRFPG----------II----SATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCM 260 (366)
T ss_pred HHHHHhhcCccceecccCc----------cc----ccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHH
Confidence 5555555555444444111 11 1111223322 1233456666766321 122899999999
Q ss_pred HHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhccCCCCCcCCchhhhhcCCCc
Q 035631 587 PIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPEV 661 (684)
Q Consensus 587 ~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~~~~~~~ 661 (684)
++++.++..+ ...+||+.+ -.+|-.|++..+.+.... .+...+.... .....+ -..+|-+..+..|.++
T Consensus 261 ~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~srq----~iad~w-p~~~dds~ar~~wh~~ 334 (366)
T KOG2774|consen 261 ASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVMPGFEIDYDICTRQ----SIADSW-PMSLDDSEARTEWHEK 334 (366)
T ss_pred HHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhCCCceeecccchhh----hhhhhc-ccccCchhHhhHHHHh
Confidence 9999998766 456999855 689999999999887642 3333222111 122223 4577888887776643
Q ss_pred h
Q 035631 662 L 662 (684)
Q Consensus 662 ~ 662 (684)
.
T Consensus 335 h 335 (366)
T KOG2774|consen 335 H 335 (366)
T ss_pred h
Confidence 3
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=163.09 Aligned_cols=228 Identities=14% Similarity=0.030 Sum_probs=154.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|+||++++++|+++ |++|+...|+........+... .....+..+.+|+.+.+.+..++..
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 34589999999999999999999999 8898877664211111101000 1123466888999999987766532
Q ss_pred -CCCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
..+|+|||+||........+ .....+++|+.++.++++++.+. ....+||++||...|..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------- 147 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-------------- 147 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC--------------
Confidence 37899999999744322221 12456799999999999888753 11368999999777632
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCC-CChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFP-EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
..+.+.|+.+|...|.+++.++.++ ++.+.+++|+++.++.... .............. . .....+++++
T Consensus 148 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~ 219 (252)
T PRK06077 148 AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK--F------TLMGKILDPE 219 (252)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh--c------CcCCCCCCHH
Confidence 2345689999999999999888775 6788999999998763210 00000000000100 0 1123689999
Q ss_pred HHHHHHHHHHhcC-CCCcEEEecCCCc
Q 035631 236 DVAEAFDVILHRG-VIGHVYNVGTKKE 261 (684)
Q Consensus 236 D~a~~i~~~~~~~-~~~~~~ni~~~~~ 261 (684)
|+|+++..++..+ ..++.|++.++..
T Consensus 220 dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 220 EVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred HHHHHHHHHhCccccCCCeEEecCCee
Confidence 9999999999754 4578999998753
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=170.89 Aligned_cols=262 Identities=23% Similarity=0.205 Sum_probs=180.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCccccccc-CCC--------------CCCCCCceEEEecC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKN-LHP--------------SRASPNFKFLKGDI 72 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~-l~~--------------~~~~~~~~~~~~Dl 72 (684)
...+++|||||||||+|.-++++|+..-+. -+++.+-|......... +.. ....+++..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 456799999999999999999999987533 37788888654332111 110 11235678888998
Q ss_pred CCHH------HHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCC
Q 035631 73 TCAD------LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 73 ~d~~------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~ 146 (684)
.+++ ++..+. .++++|||+|+...++ +.......+|..|++++++.|++....+-++|+||+.+--...
T Consensus 89 ~~~~LGis~~D~~~l~--~eV~ivih~AAtvrFd---e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~ 163 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLA--DEVNIVIHSAATVRFD---EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVG 163 (467)
T ss_pred cCcccCCChHHHHHHH--hcCCEEEEeeeeeccc---hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccc
Confidence 8743 344344 7999999999987654 4455678999999999999999988899999999977651111
Q ss_pred CCCCCCC--------------CCCC------------CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC
Q 035631 147 MESDIGN--------------PEAS------------QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ 200 (684)
Q Consensus 147 ~~~~~~~--------------~e~~------------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~ 200 (684)
...+..+ ++.. .....+.|..+|+++|.++.+++ .++|.+|+||+.|.....
T Consensus 164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~ 241 (467)
T KOG1221|consen 164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYK 241 (467)
T ss_pred cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceecccc
Confidence 1000000 0000 01246789999999999998865 489999999999988754
Q ss_pred CCC-ChH------HHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc----CC--CCcEEEecCC--CccCHH
Q 035631 201 FPE-KLI------PKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR----GV--IGHVYNVGTK--KERSVL 265 (684)
Q Consensus 201 ~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~----~~--~~~~~ni~~~--~~~t~~ 265 (684)
.|- ..+ ..++....+|.--.+..+.+...|+|.++.++.+++.+.-. .. ...+||++++ .++++.
T Consensus 242 EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~ 321 (467)
T KOG1221|consen 242 EPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG 321 (467)
T ss_pred CCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence 221 111 01111122232223456777888999999999999877621 11 2459999986 479999
Q ss_pred HHHHHHHHHhCC
Q 035631 266 DVAADICTLFKL 277 (684)
Q Consensus 266 e~~~~i~~~~g~ 277 (684)
++.+...+....
T Consensus 322 ~~~e~~~~~~~~ 333 (467)
T KOG1221|consen 322 DFIELALRYFEK 333 (467)
T ss_pred HHHHHHHHhccc
Confidence 999999888754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.7e-17 Score=161.28 Aligned_cols=241 Identities=12% Similarity=0.019 Sum_probs=158.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
++++++|||||+|+||+++++.|+++ |++|++.+|+.. ....+... .....+.++.+|+.|.+++..++..
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKP--GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999 899999998642 11111100 1123577889999999988777643
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||...... ..++....+++|+.++.++++++. +.+...++|++||...+..
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~---------- 149 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP---------- 149 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC----------
Confidence 26899999999754322 223345677999999999998874 3332478999999776532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|...+.+.+.++.+ .++++++++|+.+.++... +..................+.....+++
T Consensus 150 ----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (275)
T PRK05876 150 ----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVA--NSERIRGAACAQSSTTGSPGPLPLQDDN 223 (275)
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccccc--chhhhcCccccccccccccccccccccC
Confidence 233467999999866665555443 4899999999998876421 1100000000011111122333345678
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHh
Q 035631 232 LYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF 275 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~ 275 (684)
++++|+|++++.++.+. +.|.+.+ +....++.+...+..
T Consensus 224 ~~~~dva~~~~~ai~~~---~~~~~~~--~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 224 LGVDDIAQLTADAILAN---RLYVLPH--AASRASIRRRFERID 262 (275)
T ss_pred CCHHHHHHHHHHHHHcC---CeEEecC--hhhHHHHHHHHHHHH
Confidence 99999999999999753 3555552 345555655555544
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-17 Score=159.47 Aligned_cols=221 Identities=16% Similarity=0.128 Sum_probs=154.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc--ccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
+++|+|+||||+|+||+++++.|+++ |++|++++|..... ....+.. ......+.++.+|+.+.+.+..++..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45689999999999999999999999 89999987642211 1111000 01124678899999999988777632
Q ss_pred ----CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH-----hcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK-----LTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||.... ....++....+++|+.++.++++++. +.+ .+++|++||...+...
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------ 154 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN------ 154 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC------
Confidence 469999999997652 22233455678999999999999997 334 6799999997665321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...+.+++.++.+ .+++++++||+++.++..... ... .......+.
T Consensus 155 --------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-~~~---~~~~~~~~~--------- 213 (249)
T PRK12827 155 --------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA-APT---EHLLNPVPV--------- 213 (249)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc-chH---HHHHhhCCC---------
Confidence 22356999999999988877655 389999999999999854211 111 111111111
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+...+|+++++..++... ..++.+++.++.
T Consensus 214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 214 QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 12357899999999888643 246778887653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.3e-17 Score=160.65 Aligned_cols=224 Identities=15% Similarity=0.062 Sum_probs=152.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++|+||||+|+||++++++|+++ |++|+++ .|+.. ..+.+.. .....++.++.+|+.|.+++..++..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRK--AAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8888764 56432 1111100 01134578899999999988877643
Q ss_pred --CCCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||.......++ .....+++|+.++.++++++... .+.++||++||...+..
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 147 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY----------- 147 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------
Confidence 26899999999654322222 22346789999999998888642 12569999999655321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|.+.|.+++.++.+ .++++++++|+.+..+......-...+........+ ...++
T Consensus 148 ---~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 215 (250)
T PRK08063 148 ---LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMV 215 (250)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCc
Confidence 223457999999999999887655 479999999999987642110000111111111110 12468
Q ss_pred cHHHHHHHHHHHHhcCC---CCcEEEecCCCc
Q 035631 233 YCADVAEAFDVILHRGV---IGHVYNVGTKKE 261 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~ 261 (684)
+.+|+|+++..++..+. .++.+++.++..
T Consensus 216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 216 EPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred CHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 89999999999987542 467888887654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.3e-17 Score=160.22 Aligned_cols=227 Identities=14% Similarity=0.117 Sum_probs=156.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
..+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+.+..++..
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~ 83 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAE--ELEEAAAHLEALGIDALWIAADVADEADIERLAEET 83 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 3445689999999999999999999998 899999999642 1111110 01123577899999999988665532
Q ss_pred ----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||..... ...+.....++.|+.++.++++++... ++..+||++||...+.....
T Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~----- 158 (259)
T PRK08213 84 LERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP----- 158 (259)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----
Confidence 3689999999964322 122334467789999999999987653 23679999999766533211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
...+...|+.+|+..|.+++.++.++ ++++.+++|+.+-.+.. ..+++.+........++.
T Consensus 159 -----~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~--~~~~~~~~~~~~~~~~~~--------- 222 (259)
T PRK08213 159 -----EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT--RGTLERLGEDLLAHTPLG--------- 222 (259)
T ss_pred -----cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch--hhhhHHHHHHHHhcCCCC---------
Confidence 01234679999999999999887653 78899999998866532 233444444433333222
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|++.++..++... ..+..+++.++
T Consensus 223 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 223 RLGDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 2345799999988888643 24667777654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=158.85 Aligned_cols=220 Identities=14% Similarity=0.068 Sum_probs=153.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
.+++||||||+|+||++++++|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+.+..++...
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEA--AERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4579999999999999999999999 8999999997521 111110 011245788999999999988776432
Q ss_pred -CCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.+|+|||+++..... ...+.....+++|+.++.++.+.+.. .+ .++||++||...+...
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------- 148 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPR---------- 148 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCC----------
Confidence 689999999974322 12234556788999987777766653 34 6899999998776432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH----HHHHHHHcCCceEEecCCCce
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIP----KFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...+.+++.++.++ +++++.++|+.+.++... .... .......... ..
T Consensus 149 ----~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~~~---------~~ 213 (251)
T PRK07231 149 ----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLE--AFMGEPTPENRAKFLATI---------PL 213 (251)
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcch--hhhcccChHHHHHHhcCC---------CC
Confidence 234579999999999988887653 789999999999665321 1111 1111111111 12
Q ss_pred EecccHHHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
..+++++|+|.+++.++.... .+..+.+.++.
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 214 GRLGTPEDIANAALFLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence 356899999999999996542 35667776554
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.2e-17 Score=161.07 Aligned_cols=222 Identities=14% Similarity=0.137 Sum_probs=154.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+... ...+... ....++.++.+|+.|.+.+..++..
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAER--LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999996421 1111111 1124578899999999988766643
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||.... ....+.+...++.|+.++..+++++... ....+||++||...+..
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------- 147 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS----------- 147 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----------
Confidence 368999999986432 2223455678899999999999998652 11358999999765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCceEE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGQQLPI 221 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~ 221 (684)
..+...|+.+|...+.+++.++.+ .+++++++||+.++++... ..+ ..+.....+..
T Consensus 148 ---~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---- 218 (258)
T PRK07890 148 ---QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK--GYFRHQAGKYGVTVEQIYAETAANS---- 218 (258)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH--HHhhhcccccCCCHHHHHHHHhhcC----
Confidence 223457999999999999888765 3899999999999998531 111 11111111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+.+++|+++++..++... ..++.+.+.++.
T Consensus 219 -----~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 219 -----DLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred -----CccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 1124678999999999888642 345666665553
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6e-17 Score=161.67 Aligned_cols=233 Identities=15% Similarity=0.131 Sum_probs=155.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|+++||||||+|+||++++++|+++ |++|++++|+...... ..+........+.++.+|+.+.+.+..++..
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI 78 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 8999999986421110 0111111113588999999999887766543
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcc-cccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDE-VYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~-vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||...... ..++....+++|+.++.++++++.. .+...++|++||.. .++.
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------- 148 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------- 148 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC----------
Confidence 37899999999654322 2233456679999998877776643 23135899999854 2221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc--CCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK--GQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 229 (684)
.....|+.+|++.+.+++.++. .+++++.++|||.++++.... ..++.+...... ......+.++...+
T Consensus 149 -----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (259)
T PRK12384 149 -----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGIKPDEVEQYYIDKVPLK 222 (259)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCCChHHHHHHHHHhCccc
Confidence 1235699999999988887764 368999999999988765422 233332211100 00000111223345
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+++.+|++.++..++.+. ..++.|++.+++.
T Consensus 223 ~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 223 RGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred CCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 7889999999999888654 2468899988754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.1e-17 Score=162.81 Aligned_cols=217 Identities=17% Similarity=0.123 Sum_probs=149.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++|+||||+|+||+++++.|+++ |++|++++|+.. ....+. ..+++++.+|+.|.+.+..++.. .
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~--~l~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVD--KMEDLA----SLGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHH----hCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999 899999999742 222221 13588999999999998877642 3
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHH----HHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGT----HVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~----~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||...... .++++...+++|+.++ +.++..+++.+ ..++|++||...+...
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------------ 140 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT------------ 140 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC------------
Confidence 7999999999754321 2345567889999884 55555666655 6799999996532111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCC----------ChHHH----HHHHHHcCCceE
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPE----------KLIPK----FILLAMKGQQLP 220 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~----------~~~~~----~~~~~~~~~~~~ 220 (684)
.....|+.+|...+.+.+.++. .++++++++||+++.++..... ..... +......
T Consensus 141 --~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 213 (273)
T PRK06182 141 --PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRS----- 213 (273)
T ss_pred --CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHH-----
Confidence 1124699999999998776654 3589999999999987642100 00000 0001100
Q ss_pred EecCCCceEecccHHHHHHHHHHHHhcCCCCcEEEecCC
Q 035631 221 IHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTK 259 (684)
Q Consensus 221 ~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~ 259 (684)
......+...+|+|++++.++........|+++.+
T Consensus 214 ----~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 214 ----TYGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred ----hhccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence 01123467899999999999987555567887754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=157.93 Aligned_cols=221 Identities=16% Similarity=0.128 Sum_probs=153.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.. .....++.++.+|+.+.+.+..++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNRE--AAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 899999998642 1111111 01134688999999999988777632
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+++...... ..+.....+++|+.++.++++++. +.+ .+++|++||...+....
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~--------- 147 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSS--------- 147 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCC---------
Confidence 36899999998643211 122334568999999999888775 334 68999999987765332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEEecCCCce
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
....|+.+|++.+.+.+.++.+. +++++++||+.++++.... ......+........+.
T Consensus 148 -----~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 213 (250)
T TIGR03206 148 -----GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL--------- 213 (250)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------
Confidence 13469999999999988887664 8999999999998873210 00001122222222211
Q ss_pred EecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
..+...+|+|+++..++..+. .++++++.++
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence 124567999999999886542 4678888765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5e-17 Score=161.57 Aligned_cols=223 Identities=14% Similarity=0.107 Sum_probs=151.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++++||||+|+||++++++|+++ |++|+++.|+...... ..........+.++.+|+.|.+++.+++.. .
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAER-VAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHH-HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999999 8999999987421110 001111234578999999999998877643 3
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+++...... ..+.....++.|+.++.++.+++ ++.+ .++||++||...+...
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~------------ 147 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG------------ 147 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC------------
Confidence 7999999999754322 22234456889999987776655 4444 6899999997553211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE---KLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|.+.+.+++.++.+. +++++++||++++++..... ...+.......... .....+
T Consensus 148 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 217 (252)
T PRK06138 148 --RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRF 217 (252)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCC
Confidence 123569999999999998887654 89999999999988743100 00011111111110 011236
Q ss_pred ccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
++.+|+++++..++.++. .+..+.+.++
T Consensus 218 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 218 GTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred cCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 889999999999997643 3566776654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=156.85 Aligned_cols=222 Identities=15% Similarity=0.143 Sum_probs=150.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|++++|||||+|+||.+++++|+++ |++|+...++.. .....+.. .....++.++.+|+.|.+++.+++..
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNR-DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCH-HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH
Confidence 3468999999999999999999999 788887764321 11111110 01123577899999999988877642
Q ss_pred -CCCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHHHhc------CCCcEEEEEeCccc-ccCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEACKLT------GQVKRFIHVSTDEV-YGETDMESDI 151 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~i~~SS~~v-yg~~~~~~~~ 151 (684)
.++|+|||+|+...... .+++....+++|+.++.++++++... +...++|++||... ++...
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----- 152 (248)
T PRK06123 78 LGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG----- 152 (248)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-----
Confidence 26899999999754221 22344567899999999988887542 11247999999654 33211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
....|+.+|...|.+++.++.+. +++++++||++++++..... ..+..........++.
T Consensus 153 ---------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~-~~~~~~~~~~~~~p~~-------- 214 (248)
T PRK06123 153 ---------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-GEPGRVDRVKAGIPMG-------- 214 (248)
T ss_pred ---------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc-CCHHHHHHHHhcCCCC--------
Confidence 01249999999999998887664 89999999999999853211 1223333333222221
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+.+++|+++++..++... ..++.|++.++
T Consensus 215 -~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 215 -RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred -CCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 1246899999999988653 35678988765
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=155.91 Aligned_cols=209 Identities=17% Similarity=0.171 Sum_probs=144.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 89 (684)
|+|+||||||+|+||+++++.|+++ ++|++++|+.. ....+.. ..+.++++++|+.|.+.+.+++... ++|+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~--~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 74 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAE--RLDELAA--ELPGATPFPVDLTDPEAIAAAVEQLGRLDV 74 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHH--HHHHHHH--HhccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence 4579999999999999999999987 78999999742 2111111 1135788999999999998887433 6999
Q ss_pred EEEcCccCCcCCC----CCChHHHHHHHHHH----HHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 90 IMHFAAQTHVDNS----FGNSFEFTNNNIYG----THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 90 Vih~a~~~~~~~~----~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
|||++|....... .++....++.|+.+ ++++++++++.+ +++|++||...++.. .+
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~--------------~~ 138 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRAN--------------PG 138 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcC--------------CC
Confidence 9999997543211 12234457888887 455555555544 799999998765422 12
Q ss_pred CChhHHHHHHHHHHHHHHHHhc-C-CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSY-G-LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
...|+.+|...|.+++.++... + +++..++|+.+.++.. ..+... .+.. .....+++.+|+++
T Consensus 139 ~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~------~~~~~~--~~~~-------~~~~~~~~~~dva~ 203 (227)
T PRK08219 139 WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ------RGLVAQ--EGGE-------YDPERYLRPETVAK 203 (227)
T ss_pred CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh------hhhhhh--hccc-------cCCCCCCCHHHHHH
Confidence 3569999999999888776542 4 7888888887654421 111110 0110 11236799999999
Q ss_pred HHHHHHhcCCCCcEEEec
Q 035631 240 AFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~ 257 (684)
+++.+++++..+.++++.
T Consensus 204 ~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 204 AVRFAVDAPPDAHITEVV 221 (227)
T ss_pred HHHHHHcCCCCCccceEE
Confidence 999999887767777775
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-16 Score=154.50 Aligned_cols=220 Identities=16% Similarity=0.134 Sum_probs=154.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~ 89 (684)
.+++++||||+|+||+++++.|+++ |++|++++|+.. ....+.. ..+..++.+|+.+.+.+..++.. .++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~d~ 80 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAA--ALDRLAG---ETGCEPLRLDVGDDAAIRAALAAAGAFDG 80 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH---HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence 4579999999999999999999999 899999999642 1111111 11356788999999888887754 35899
Q ss_pred EEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 90 IMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 90 Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
|||+|+..... ....+....+..|+.++.++++++.+. +...+||++||...+... .+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~~ 146 (245)
T PRK07060 81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL--------------PD 146 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC--------------CC
Confidence 99999975432 122345566789999999999888653 213689999997665332 12
Q ss_pred CChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
...|+.+|...|.+++.++.+ .+++++.+||+.++++................... ....+++.+|++
T Consensus 147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a 217 (245)
T PRK07060 147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDVA 217 (245)
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence 356999999999999888765 37999999999999875311000011111111111 123578999999
Q ss_pred HHHHHHHhcCC---CCcEEEecCCC
Q 035631 239 EAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 239 ~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+++..++..+. .++.+++.+|.
T Consensus 218 ~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 218 APILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred HHHHHHcCcccCCccCcEEeECCCc
Confidence 99999997542 46788887653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=158.61 Aligned_cols=214 Identities=16% Similarity=0.166 Sum_probs=148.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----CC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----EG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 86 (684)
+++|+||||+|+||++++++|+++ |++|++++|+... . ....+++++++|+.|.+++..++.. ..
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~--~------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPAR--A------APIPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhh--c------cccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999 8999999996421 1 1124688999999999998887743 26
Q ss_pred CCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .+++|++||...+...
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------- 139 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPA------------- 139 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCC-------------
Confidence 899999999754322 22345678899999999888875 4444 6899999997654321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC----CChHHHHH---HHHHcCCceEEecCCCce
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP----EKLIPKFI---LLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|...|.+.+.++.+ +++++++++|+++.++.... ...+.... .......... .
T Consensus 140 -~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 211 (270)
T PRK06179 140 -PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKA-------V 211 (270)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhc-------c
Confidence 12357999999999998877544 58999999999998763210 00111000 0000000000 0
Q ss_pred EecccHHHHHHHHHHHHhcCCCCcEEEec
Q 035631 229 RSYLYCADVAEAFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~~~~~~ni~ 257 (684)
......+|+|+.++.++..+.....|..+
T Consensus 212 ~~~~~~~~va~~~~~~~~~~~~~~~~~~~ 240 (270)
T PRK06179 212 KKADAPEVVADTVVKAALGPWPKMRYTAG 240 (270)
T ss_pred ccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence 12356789999999998876655566543
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=155.49 Aligned_cols=223 Identities=18% Similarity=0.165 Sum_probs=154.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++|+||||+|.||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++..
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAA--EARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 899999988642 1111110 01124688899999999988777643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG---QVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||++|..... ...+.....++.|+.++.++++++...- ...+||++||...+...
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 150 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA---------- 150 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC----------
Confidence 4799999999975432 1223345567899999999998875421 13599999996654321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.....|+.+|...|.+++.++.+ .+++++.++||.+..+....... ..+........ ....++
T Consensus 151 ----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~---------~~~~~~ 216 (250)
T PRK12939 151 ----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGR---------ALERLQ 216 (250)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcC---------CCCCCC
Confidence 12346999999999999887654 47889999999987764311110 01222222111 223568
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+|+|+++..++... ..++.+++.++.
T Consensus 217 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 217 VPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred CHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 8999999999999753 357788887664
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.3e-16 Score=155.79 Aligned_cols=225 Identities=16% Similarity=0.128 Sum_probs=157.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+|+||||||+|+||.+++++|+++ |++|++++|+.... ...+.. .....++.++.+|+.+.+.+..++..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHED-ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 334589999999999999999999999 89999998864211 111110 01123577899999999988777643
Q ss_pred ---CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ..+++....+++|+.++.++++++... ....++|++||...|.....
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~-------- 191 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET-------- 191 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC--------
Confidence 3789999999975321 222344568899999999999998752 12368999999887743321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
...|+.+|...+.+++.++.++ +++++.++||.++.+.... ............. .....+.
T Consensus 192 ------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~-~~~~~~~~~~~~~---------~~~~~~~ 255 (290)
T PRK06701 192 ------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS-DFDEEKVSQFGSN---------TPMQRPG 255 (290)
T ss_pred ------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc-ccCHHHHHHHHhc---------CCcCCCc
Confidence 2359999999999998888764 8999999999998874311 1111112111111 1123568
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+|+|++++.++... ..+..+++.++.
T Consensus 256 ~~~dva~~~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 256 QPEELAPAYVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred CHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence 8999999999998754 256788887664
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-16 Score=151.84 Aligned_cols=165 Identities=18% Similarity=0.146 Sum_probs=127.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GI 87 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 87 (684)
+.+++|+||||+|+||+++++.|+++ |+ +|++++|+... ... ...++.++.+|+.|.+.+.+++... .+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~i 74 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPES--VTD-----LGPRVVPLQLDVTDPASVAAAAEAASDV 74 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhh--hhh-----cCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 34579999999999999999999999 78 99999997421 111 2346889999999999988877543 58
Q ss_pred CEEEEcCccC-Cc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQT-HV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 88 d~Vih~a~~~-~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
|+|||++|.. .. ....++....+++|+.++.++++++.+ .+ ..+||++||...+...
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~------------- 140 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNF------------- 140 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCC-------------
Confidence 9999999973 21 122234556788999999999988753 33 5789999997765321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCC
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGP 198 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 198 (684)
.+...|+.+|...|.+.+.++.+. +++++++||+.+.++
T Consensus 141 -~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 141 -PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred -CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 234579999999999988876553 889999999998765
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=161.73 Aligned_cols=201 Identities=11% Similarity=0.083 Sum_probs=137.6
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHH------h-cCCCeEEEcceec
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMK------R-VRPTHVLNAAGIT 430 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~------~-~~~d~Vih~a~~~ 430 (684)
+||||||||++|++++++|+++|++| ..+.+|+.|.+++..+++ + + |.|+|+++..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~--d~v~~~~~~~ 78 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI--SAVYLVAPPI 78 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCce--eEEEEeCCCC
Confidence 58999999999999999999999987 246778999999999883 4 4 9999998732
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
. .. .....+++++|++.++ ++|++||..++.+ . + .+..
T Consensus 79 ----~----~~--------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------------~-~------~~~~ 117 (285)
T TIGR03649 79 ----P----DL--------APPMIKFIDFARSKGVRRFVLLSASIIEKG------------------G-P------AMGQ 117 (285)
T ss_pred ----C----Ch--------hHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------C-c------hHHH
Confidence 0 10 1245689999999998 5999988644310 0 0 1111
Q ss_pred HhhhhhHHh-hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHH
Q 035631 510 VTFLSYLEI-FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588 (684)
Q Consensus 510 ~E~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~ 588 (684)
.|.. .+. .+.+.++.|+..++...........+.... ....+.++...+| +|++|++++
T Consensus 118 ~~~~--l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~-----------------v~~~Dva~~ 177 (285)
T TIGR03649 118 VHAH--LDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKEN-KIYSATGDGKIPF-----------------VSADDIARV 177 (285)
T ss_pred HHHH--HHhccCCCEEEEeccHHhhhhcccccccccccCC-eEEecCCCCccCc-----------------ccHHHHHHH
Confidence 2221 122 255666677765542111110011111111 1123445556677 999999999
Q ss_pred HHHHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh
Q 035631 589 AIEMARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ 636 (684)
Q Consensus 589 ~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 636 (684)
+..++..+ .++.|++++++.+|+.|+++.+.+.+|++.....++..+.
T Consensus 178 ~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~ 227 (285)
T TIGR03649 178 AYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEEL 227 (285)
T ss_pred HHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHHH
Confidence 99999875 4568999999999999999999999999877777666543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.7e-16 Score=152.63 Aligned_cols=215 Identities=16% Similarity=0.104 Sum_probs=153.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+. +. .....+..+++|+.+.+.+.+++..
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~-------~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF-------LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch-------hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34589999999999999999999999 89999999864 11 1234678899999999988877642
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+++...... ..+++...+++|+.++.++++++.. .+ ..++|++||.....
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~------------- 140 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV------------- 140 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc-------------
Confidence 35899999999754321 2345567889999999999988753 23 46899999965432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCC--------hHHHHHHHHHcCCceEEecCC
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEK--------LIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+..+...|+.+|...|.+.+.++.+ +++++++++|+.++++...... ...........+
T Consensus 141 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 210 (252)
T PRK08220 141 -PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG--------- 210 (252)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc---------
Confidence 2223467999999999999888766 5899999999999987431100 000001111111
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.....+++++|+|+++..++... ..++++.+.+|
T Consensus 211 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg 247 (252)
T PRK08220 211 IPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG 247 (252)
T ss_pred CCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence 11235789999999999988643 24556666655
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-16 Score=153.02 Aligned_cols=221 Identities=17% Similarity=0.154 Sum_probs=150.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
.+++||||||||+||+++++.|+++ |++|+++.|+........... ......+.++.+|+.+.+.+..++..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4479999999999999999999999 899988887642111000000 01134678889999999988777642
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcc-cccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDE-VYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~-vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+|+...... ..+.....+..|+.++.++++++... ...++||++||.. +|+..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~----------- 150 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP----------- 150 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------
Confidence 37899999999754321 12234567789999999999888753 1257899999853 33321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|.+.+.+++.++.+ .+++++++||+.+.++... ...+.+........+ ...+.+
T Consensus 151 ----~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~ 215 (248)
T PRK05557 151 ----GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD--ALPEDVKEAILAQIP---------LGRLGQ 215 (248)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc--ccChHHHHHHHhcCC---------CCCCcC
Confidence 2356999999999888776543 3789999999988655321 222222222222221 123578
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+|+++++..++... ..++.|++.++
T Consensus 216 ~~~va~~~~~l~~~~~~~~~g~~~~i~~~ 244 (248)
T PRK05557 216 PEEIASAVAFLASDEAAYITGQTLHVNGG 244 (248)
T ss_pred HHHHHHHHHHHcCcccCCccccEEEecCC
Confidence 899999998888652 34678999865
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=151.26 Aligned_cols=223 Identities=16% Similarity=0.154 Sum_probs=153.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||+|+||++++++|+++ |++|++++|+........+. .....+..+.+|+.+.+++..+++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVE--ALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 89999999864211111111 1124578899999999988766542
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++.. .+...++|++||...|....
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 148 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI---------- 148 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------
Confidence 36999999999754322 2234556788999999999988753 22146999999987764321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|++.+.+.+.++++. +++++.++||.+..+.......-.......... ++ ...++.
T Consensus 149 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~ 215 (248)
T TIGR01832 149 ----RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--IP-------AGRWGT 215 (248)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--CC-------CCCCcC
Confidence 12369999999999999888774 799999999999876421100000111111111 11 135788
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 234 CADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.+|+|+++..++.... .+.++.+.++
T Consensus 216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 216 PDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 9999999999996432 3555555433
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.9e-16 Score=152.37 Aligned_cols=221 Identities=18% Similarity=0.156 Sum_probs=151.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++|+||||+|+||+++++.|+++ |++|++++|+... ...+.. .....+.++.+|+.+.+++..++.. .
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~--~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRER--GSKVAK-ALGENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHH--HHHHHH-HcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 8999999886421 111111 1123578899999999887655432 2
Q ss_pred CCCEEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------------ 151 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------------ 151 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------------
Confidence 589999999975421 122345678899999999999999631 113689999987654221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
...+.|+.+|+..|.+++.++.++ ++++..++|+++.++....... ..+........ + ...+.+.+
T Consensus 152 --~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~--~-------~~~~~~~~ 219 (255)
T PRK05717 152 --PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA-EPLSEADHAQH--P-------AGRVGTVE 219 (255)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc-hHHHHHHhhcC--C-------CCCCcCHH
Confidence 113469999999999999888775 4788999999998874321111 11111111111 1 01357889
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
|++.++..++... ..++.+.+.++.
T Consensus 220 ~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 220 DVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 9999998888643 246677776543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.2e-16 Score=155.74 Aligned_cols=225 Identities=15% Similarity=0.113 Sum_probs=154.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.++++|||||+|+||+++++.|+++ |++|++.+|+........+... .....+.++.+|+.|.+++..++..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4479999999999999999999999 8999988764322221111110 1123577889999999887766532
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|++||+||.... ..+.+++...+++|+.++..+++++... ....++|++||...|....
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------- 194 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------- 194 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------
Confidence 368999999996321 2233456678899999999999888652 1136899999987764321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
....|+.+|...+.+.+.++.+ +++++..++|+++.++................... + ...+...
T Consensus 195 ---~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~r~~~p 262 (294)
T PRK07985 195 ---HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT--P-------MKRAGQP 262 (294)
T ss_pred ---CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccC--C-------CCCCCCH
Confidence 1246999999999998888766 48999999999999884311111111111121111 1 1134678
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+|+|.+++.++.... .+.++.+.+|.
T Consensus 263 edva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 263 AELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 999999999986532 46777777653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.1e-16 Score=153.69 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=154.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.++|++|||||+|+||+++++.|+++ |++|+++.+... .....+... .....+.++.+|+.|.+.+..++..
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 82 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSR-DEAEALAAEIRALGRRAVALQADLADEAEVRALVARAS 82 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 445689999999999999999999999 889988776431 111111100 1134578899999999988777642
Q ss_pred ---CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLTG---QVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|+|||+||.... ...+++....+++|+.++.++++++.... .-.++|++||...+...
T Consensus 83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~--------- 153 (258)
T PRK09134 83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN--------- 153 (258)
T ss_pred HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC---------
Confidence 358999999996532 22233456788999999999998876532 13588888875443211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.....|+.+|...|.+.+.++.+. +++++.++||.+...... ....+... ....+ . + ...
T Consensus 154 -----p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~---~~~~~~~~-~~~~~--~-~------~~~ 215 (258)
T PRK09134 154 -----PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ---SPEDFARQ-HAATP--L-G------RGS 215 (258)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc---ChHHHHHH-HhcCC--C-C------CCc
Confidence 112469999999999999887664 488899999988764321 11122211 11111 1 1 236
Q ss_pred cHHHHHHHHHHHHhcCC-CCcEEEecCCCccCHH
Q 035631 233 YCADVAEAFDVILHRGV-IGHVYNVGTKKERSVL 265 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~-~~~~~ni~~~~~~t~~ 265 (684)
.++|+|++++.+++.+. .++.|++.++..+++.
T Consensus 216 ~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 216 TPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred CHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 78999999999998654 5678888877655443
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-16 Score=153.14 Aligned_cols=227 Identities=20% Similarity=0.190 Sum_probs=148.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|+||||||+|+||+++++.|+++ |++|++++|+..... ...+........+.++.+|+.|.+++..++..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 899999998642110 01111111123466779999999998877643
Q ss_pred -CCCCEEEEcCccCCc-------CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-------DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|+|||+|+.... ...++.....+++|+.++..+++++ ++.+ .+++|++||...+......
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~---- 155 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFE---- 155 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccch----
Confidence 238999999975321 1112234456788887776665554 4444 5799999996654322111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+..+..+...|+.+|...+.+.+.++.+ .++++++++|+.++++.. ..+........+ ..
T Consensus 156 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~---------~~ 220 (256)
T PRK09186 156 IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCN---------GK 220 (256)
T ss_pred hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCC---------cc
Confidence 112222333347999999999998777665 478999999998876531 112222221110 12
Q ss_pred ecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.+++.+|+|+++..++.+.. .+..+.+.+|
T Consensus 221 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 221 GMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred CCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 46899999999999997532 4666776655
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-17 Score=163.34 Aligned_cols=148 Identities=16% Similarity=0.066 Sum_probs=90.5
Q ss_pred EEcCCcchhHHHHHHHHhcCC--eE-------------------------------------eeeeccCCCh------hH
Q 035631 376 IYGKTGWIGGLLGKYCKDKGI--AF-------------------------------------EFGTGRLEDK------NS 410 (684)
Q Consensus 376 ItG~~G~iG~~l~~~L~~~g~--~v-------------------------------------~~~~~d~~d~------~~ 410 (684)
|||||||+|++|+++|++++. +| +++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 43 6678888754 45
Q ss_pred HHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCC--
Q 035631 411 LLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSS-- 487 (684)
Q Consensus 411 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~-- 487 (684)
+..+.+.+ |+||||||.. ++. .......++||.||.++++.|.+.. .+++|+||+.+.+...... .+.
T Consensus 81 ~~~L~~~v--~~IiH~Aa~v-----~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~-~~~~~ 151 (249)
T PF07993_consen 81 YQELAEEV--DVIIHCAASV-----NFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTI-EEKVY 151 (249)
T ss_dssp HHHHHHH----EEEE--SS------SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-
T ss_pred hhcccccc--ceeeecchhh-----hhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcc-ccccc
Confidence 66777777 9999999955 332 3455688999999999999999654 4799999965555333211 110
Q ss_pred --CCCccCCCCCCCCChhhhhhHhHhhhhhHHh--hhhhhhhhhhhhhhH
Q 035631 488 --IGFKEDDEPNFTRSFYSKTKAMVTFLSYLEI--FVLVICIECLINFQV 533 (684)
Q Consensus 488 --~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~--~~~~~~~~~~~~~~~ 533 (684)
.......... ..+.|..||.++|.+.+... .+.++.+.|+..+.+
T Consensus 152 ~~~~~~~~~~~~-~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 152 PEEEDDLDPPQG-FPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HHH--EEE--TT-SEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred ccccccchhhcc-CCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 0011111222 55789999999999965543 478888888886654
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-16 Score=158.55 Aligned_cols=224 Identities=12% Similarity=0.026 Sum_probs=145.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHh-----cCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKR-----VRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~-----~~~d~Vi 424 (684)
.+++|||||+|+||++++++|+++|++| .++.+|++|.+++.++++. .++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999876 3467899999998887764 2479999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHH----HHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVC----KEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .++........+++|+.++.++++++ ++.+. ++|++||..... +..
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~- 143 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------------AYP- 143 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------------CCC-
Confidence 9999762111 11223445678889999999999998 34443 699999864321 011
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+.+.|+.+|...|.+..... .+.++.+.++..+.. .+.........+..+ .......+.+.+..+...
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 216 (276)
T PRK06482 144 GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART-----NFGAGLDRGAPLDAY--DDTPVGDLRRALADGSFA 216 (276)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccc-----CCcccccccCCCccc--cchhhHHHHHHHhhccCC
Confidence 45789999999997743322 233444444432210 000000000001111 111122333333332211
Q ss_pred ccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcC
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
.+.+++|++++++.++.++ ....||++++...++.|+++.+.+.++
T Consensus 217 ----~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 217 ----IPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ----CCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 2468999999999999866 445899999999999999888877765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-15 Score=154.60 Aligned_cols=228 Identities=17% Similarity=0.139 Sum_probs=153.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+.++++|||||+|+||++++++|+++ |++|++++|+... ...+. ......++.++++|+.|.+.+.+++..
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDL--GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999 8999999886421 11111 111124688999999999998777642
Q ss_pred --CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCccc-ccCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEV-YGETDMESDIG 152 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~v-yg~~~~~~~~~ 152 (684)
.++|+|||+||.... ...++++...+++|+.++.++++++... ....++|++||... ++..
T Consensus 91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------- 163 (280)
T PLN02253 91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL------- 163 (280)
T ss_pred HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-------
Confidence 269999999997532 1223445678999999999998877532 11358899888543 2211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---CC-ChHHHHH----HHHHcCCceEE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF---PE-KLIPKFI----LLAMKGQQLPI 221 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---~~-~~~~~~~----~~~~~~~~~~~ 221 (684)
....|+.+|.+.|.+.+.++.+. ++++..++|+.+..+... +. ....... .......+ +
T Consensus 164 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l 233 (280)
T PLN02253 164 --------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN--L 233 (280)
T ss_pred --------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC--C
Confidence 12469999999999999887764 788999999999776321 11 0001111 11111111 0
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcCC---CCcEEEecCCCccC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKERS 263 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~t 263 (684)
....++.+|+|+++..++.... .++.+++.+|...+
T Consensus 234 ------~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~ 272 (280)
T PLN02253 234 ------KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT 272 (280)
T ss_pred ------cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence 0134789999999999986532 46788887765433
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-15 Score=146.78 Aligned_cols=212 Identities=15% Similarity=0.174 Sum_probs=147.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc----cCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV----SEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~ 86 (684)
..++||||||+|+||++++++|+++ |++|++++|+... . ...+++.+|+.+.+.+.+++. ..+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~----~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 68 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAID----D-------FPGELFACDLADIEQTAATLAQINEIHP 68 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCccc----c-------cCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 3478999999999999999999999 8999999996521 0 112578999999988766553 237
Q ss_pred CCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||++|...... ..++....++.|+.++.++.+++ ++.+ ..++|++||...|+..
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------- 134 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFGAL------------- 134 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccCCC-------------
Confidence 899999999765422 22345567889999988776665 3444 6799999998766432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
....|+.+|...|.+++.++.+ .+++++++||+.+..+..... ..............+. ..+...
T Consensus 135 --~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 203 (234)
T PRK07577 135 --DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---------RRLGTP 203 (234)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---------CCCcCH
Confidence 1356999999999998777544 489999999999987642100 0011111111111111 123467
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+|+|.++..++..+ ..++.+.+.++.
T Consensus 204 ~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 204 EEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 99999999999754 346777776553
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=153.28 Aligned_cols=165 Identities=16% Similarity=0.183 Sum_probs=124.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc------
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS------ 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 84 (684)
|+++|+||||+|+||+++++.|.++ |++|++++|+.. ....+. ..+++++.+|+.|.+++..++..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~--~~~~l~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEE--DVAALE----AEGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHH----HCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999 899999999742 222221 13578899999999887766542
Q ss_pred CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHH----HHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYG----THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
..+|+|||+||........ +.....+++|+.+ +++++..+++.+ ..++|++||...+.
T Consensus 75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~------------- 140 (277)
T PRK05993 75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLV------------- 140 (277)
T ss_pred CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcC-------------
Confidence 2689999999976433222 2344678999998 666777777765 68999999965432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCC
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGP 198 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~ 198 (684)
+..+...|+.+|+..|.+.+.++. .+++++++++||.+-.+
T Consensus 141 -~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 141 -PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred -CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 122346799999999999877653 35899999999988655
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=150.72 Aligned_cols=221 Identities=18% Similarity=0.183 Sum_probs=152.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++|+||||+|+||+++++.|+++ |++|++++|+.. .....+.. .....++.++.+|+.+.+.+.+++..
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999 899999998742 11111100 11234588999999999987776632
Q ss_pred CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||++|.... ....+.....++.|+.++.++.+++ ++.+ ..+||++||...+....
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~---------- 147 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQF---------- 147 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCC----------
Confidence 369999999997532 2223445567889999988885544 5444 67999999976653221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|.+.+.+++.++.+ .++++++++|+++.++.... ..+..........+. ..+..
T Consensus 148 ----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~ 212 (245)
T PRK12824 148 ----GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ--MGPEVLQSIVNQIPM---------KRLGT 212 (245)
T ss_pred ----CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh--cCHHHHHHHHhcCCC---------CCCCC
Confidence 2346999999999888777643 47899999999998764321 112222222222211 23456
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+|+++++..++... ..++.+++.++..
T Consensus 213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 213 PEEIAAAVAFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred HHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence 799999998888643 3578899987754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.4e-16 Score=159.66 Aligned_cols=187 Identities=14% Similarity=0.120 Sum_probs=131.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++|+||||+|+||.++++.|+++ |++|++++|+..... ...+. .....+.++.+|+.|.+++..++..
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELG--IPPDSYTIIHIDLGDLDSVRRFVDDFR 78 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh--ccCCceEEEEecCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999998642111 11111 1124678899999999988777643
Q ss_pred ---CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCC-CcEEEEEeCcccccCC-CCC--
Q 035631 85 ---EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQ-VKRFIHVSTDEVYGET-DME-- 148 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~-~~~~i~~SS~~vyg~~-~~~-- 148 (684)
.++|+|||+||.... ..+.+..+..+++|+.++.++++++.. .+. ..|+|++||...+... ...
T Consensus 79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~ 158 (322)
T PRK07453 79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP 158 (322)
T ss_pred HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence 259999999996532 123345667889999999998887754 221 3599999997764311 000
Q ss_pred CCCC------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeCCC
Q 035631 149 SDIG------------------NPEASQLLPTNPYSATKAGAEMLVMAYHRSY----GLPTITTRGNNVYGPN 199 (684)
Q Consensus 149 ~~~~------------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~ 199 (684)
.... ..+..+..|...|+.||.+.+.+.+.+++++ ++.++.+|||+|++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 0000 0011234567889999999988888887664 7899999999998754
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=150.55 Aligned_cols=221 Identities=15% Similarity=0.096 Sum_probs=149.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++|+||||+|+||++++++|+++ |++|++++|+.. ....+.. .....+.++++|+.|.+++..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPA--SLEAARA-ELGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHH--HHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 899999998642 1111110 1123577889999998876655431
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCc-ccccCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTD-EVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~-~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||. ..|+.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-------------- 144 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-------------- 144 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC--------------
Confidence 3689999999975432 223455678899999999999999742 112567777764 33432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
...+.|+.+|...|.+++.++.+. +++++++||+.++++... .......+.+......++. -+
T Consensus 145 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 214 (249)
T PRK06500 145 -PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RF 214 (249)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CC
Confidence 123579999999999998876553 899999999999987321 1122233333333322221 23
Q ss_pred ccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
...+|+|+++..++.... .+..+.+.++
T Consensus 215 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 215 GTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred cCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 578999999999886432 3445555443
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.8e-16 Score=151.79 Aligned_cols=220 Identities=15% Similarity=0.115 Sum_probs=145.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
++||||||+|+||++++++|+++ |++|+++ .|+.. ....... .....++..+++|+.|.+.+..++..
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 77 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLH--AAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD 77 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChH--HHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 58999999999999999999999 8898774 45321 1111100 01123578899999999988877642
Q ss_pred CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhc------CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLT------GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+++..... ...++....+++|+.++..+++++... +...+||++||...+....
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~------- 150 (247)
T PRK09730 78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP------- 150 (247)
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC-------
Confidence 3689999999975321 122234467899999998777665432 1135799999975532211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|...|.+++.++.+ .+++++++||+++|++....... +..........+.. -
T Consensus 151 ------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~ 214 (247)
T PRK09730 151 ------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPMQ---------R 214 (247)
T ss_pred ------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCCC---------C
Confidence 01135999999999998877654 48999999999999985422221 22222222222211 1
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
....+|+++++..++... ..+..|++.++
T Consensus 215 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 215 GGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred CcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 236899999999888654 34567777654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.8e-15 Score=148.79 Aligned_cols=221 Identities=15% Similarity=0.069 Sum_probs=153.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
++++++|||||+|+||+++++.|+++ |++|++++|+... .....+++++++|+.+.+++.+++..
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999996421 11234678899999999888777643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+.....+++|+.++.++++++.. .+...++|++||...+..
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------ 141 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP------------ 141 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC------------
Confidence 2689999999965322 22234557789999999999998764 122468999999765422
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
......|+.+|...|.+++.++.++ .+++..++|+.+..+......--...........+ ...+...
T Consensus 142 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p 210 (252)
T PRK07856 142 --SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATP 210 (252)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCH
Confidence 1224579999999999999888764 37788899998876632100000111111111111 1134578
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
+|++++++.++... ..+..+.+.+|...+
T Consensus 211 ~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 211 ADIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred HHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 99999999988653 356778887665443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.4e-15 Score=148.52 Aligned_cols=232 Identities=14% Similarity=0.093 Sum_probs=158.4
Q ss_pred CCCCCCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHH
Q 035631 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLM 78 (684)
Q Consensus 1 m~~~~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~ 78 (684)
|.... .+.+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. .....++.++.+|+.+.+++
T Consensus 1 ~~~~~-~~~l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i 75 (255)
T PRK06113 1 MFNSD-NLRLDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADA--ANHVVDEIQQLGGQAFACRCDITSEQEL 75 (255)
T ss_pred CCCcc-ccCcCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHH
Confidence 54443 33456789999999999999999999999 8999999886421 111110 01123577889999999987
Q ss_pred HHhhcc-----CCCCEEEEcCccCCcCC---CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCC
Q 035631 79 NYLLVS-----EGIDTIMHFAAQTHVDN---SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 79 ~~~~~~-----~~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~ 146 (684)
.+++.. .++|+|||+||...... ..++....+++|+.++.++++++.. .+ ..++|++||.....
T Consensus 76 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--- 151 (255)
T PRK06113 76 SALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--- 151 (255)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccC---
Confidence 766532 36899999999754322 2234555689999999999999863 22 46999999965431
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEec
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
+..+...|+.+|.+.+.+++.++.+ .++++.++.||.+-.+... ....+.+........+
T Consensus 152 -----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~----- 214 (255)
T PRK06113 152 -----------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK-SVITPEIEQKMLQHTP----- 214 (255)
T ss_pred -----------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc-cccCHHHHHHHHhcCC-----
Confidence 1223457999999999999888755 3788999999988765321 1112222222222211
Q ss_pred CCCceEecccHHHHHHHHHHHHhcCC---CCcEEEecCCCcc
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKER 262 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~~ 262 (684)
...+...+|+++++..++.... .++.+++.++...
T Consensus 215 ----~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 215 ----IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred ----CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence 1135678999999999986532 4678888877543
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-16 Score=192.94 Aligned_cols=231 Identities=14% Similarity=0.185 Sum_probs=152.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC----Ce----------------------------------EeeeeccCCC-----
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG----IA----------------------------------FEFGTGRLED----- 407 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g----~~----------------------------------v~~~~~d~~d----- 407 (684)
.++|||||+|||+|++|+++|++++ +. ++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 3689999999999999999999877 22 3456677753
Q ss_pred -hhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCC-
Q 035631 408 -KNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQ- 484 (684)
Q Consensus 408 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~- 484 (684)
.+.+.++..++ |+|||+|+.. +. ..........|+.|+.+++++|.+.++ +++|+||.+||+...-.+.
T Consensus 1051 ~~~~~~~l~~~~--d~iiH~Aa~~---~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443 1051 SDEKWSDLTNEV--DVIIHNGALV---HW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred CHHHHHHHHhcC--CEEEECCcEe---cC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchh
Confidence 34556665555 9999999965 21 122334556899999999999998876 5999999999974211000
Q ss_pred -----CCCCCCccCCC-----CCCCCChhhhhhHhHhhhhhHH-hhhhhhhhhhhhhhhHHHHHH------hhhhhhccc
Q 035631 485 -----GSSIGFKEDDE-----PNFTRSFYSKTKAMVTFLSYLE-IFVLVICIECLINFQVEGLLK------AYENVCTLR 547 (684)
Q Consensus 485 -----~~~~~~~e~~~-----~~~p~~~Y~~sK~~~E~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 547 (684)
.....+.|++. .. +.+.|+.||..+|.++... ..+.++.+.|+.++++.+..+ .+...+...
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~-~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKG-LGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred hhhhhccCCCCCccccccccccc-CCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence 00011333322 22 4567999999999885432 346677777777665432111 111111111
Q ss_pred cccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCc----cceeEecCCCcccHHHHHHHHHhhcC
Q 035631 548 LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNC----RGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 548 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~----~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
.....++++...++| +|+||++++++.++.+.. ..+||++++..+++.++++.+.+. |
T Consensus 1202 ~~~~~~p~~~~~~~~-----------------~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g 1263 (1389)
T TIGR03443 1202 IQLGLIPNINNTVNM-----------------VPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-G 1263 (1389)
T ss_pred HHhCCcCCCCCcccc-----------------ccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-C
Confidence 112222333334455 999999999999987552 238999999999999999999754 5
Q ss_pred Ccccc
Q 035631 624 PQLKW 628 (684)
Q Consensus 624 ~~~~~ 628 (684)
.+...
T Consensus 1264 ~~~~~ 1268 (1389)
T TIGR03443 1264 YDVEI 1268 (1389)
T ss_pred CCCCc
Confidence 54433
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-16 Score=153.45 Aligned_cols=208 Identities=16% Similarity=0.108 Sum_probs=145.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ...++.++.+|+.|.+.+..++..
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELAD--HGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999 899999999742111 011111 134678889999999988777643
Q ss_pred CCCCEEEEcCccCCcCCCC-----CChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSF-----GNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~-----~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||++|........ +.....++.|+.++.++++.+... ....++|++||...+...
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 144 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV------------ 144 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC------------
Confidence 2689999999975433222 224566899999999999988531 124789999997766421
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.+...|+.+|...|.+.+.+..+ .++++++++|+.+..+... .. .. ..+.+ ....+.....++++
T Consensus 145 --~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~--~~----~~--~~~~~--~~~~~~~~~~~~~~ 212 (263)
T PRK06181 145 --PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRK--RA----LD--GDGKP--LGKSPMQESKIMSA 212 (263)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcch--hh----cc--ccccc--cccccccccCCCCH
Confidence 23457999999999998776543 4899999999998765321 00 00 01111 11112222478999
Q ss_pred HHHHHHHHHHHhc
Q 035631 235 ADVAEAFDVILHR 247 (684)
Q Consensus 235 ~D~a~~i~~~~~~ 247 (684)
+|+|+++..++..
T Consensus 213 ~dva~~i~~~~~~ 225 (263)
T PRK06181 213 EECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999975
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-15 Score=148.58 Aligned_cols=220 Identities=16% Similarity=0.181 Sum_probs=152.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
..+++|||||+|+||+.+++.|+++ |++|++++|+... ...... .....++.++.+|+.+.+.+.+++..
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEK--LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8899999986421 111100 01134678899999998887766543
Q ss_pred -CCCCEEEEcCccCCc-------------CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCC
Q 035631 85 -EGIDTIMHFAAQTHV-------------DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-------------~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~ 146 (684)
..+|+|||+||.... +...+.....+.+|+.++..+.+.+. +.....++|++||...|+..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~- 158 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM- 158 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-
Confidence 358999999996432 11223344567899998887765443 22223579999997766432
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEec
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
+...|+.+|.+.|.+++.++.+ .+++++.++|+.+.++... ...+..........+.
T Consensus 159 --------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~~---- 218 (253)
T PRK08217 159 --------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA--AMKPEALERLEKMIPV---- 218 (253)
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc--ccCHHHHHHHHhcCCc----
Confidence 2356999999999998887654 5899999999999887532 2223333333322211
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKK 260 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~ 260 (684)
..+.+.+|+++++..++... ..+++|++.++-
T Consensus 219 -----~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 219 -----GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred -----CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 23568899999999988654 367889988753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=149.07 Aligned_cols=203 Identities=15% Similarity=0.103 Sum_probs=143.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++||||+|.||+.++++|+++ |++|++++|+... ...+.. .....++.++.+|+.+.+.+..++..
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDA--LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8899999997521 111110 01124678899999999987776642
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||++|...... ..++....+++|+.++.++++++ ++.+ ..++|++||...++..
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---------- 149 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF---------- 149 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCC----------
Confidence 36999999999754322 22345567889999888877665 3333 5799999998776432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+ .+++++++||+.+-.+....... . . .. .....+
T Consensus 150 ----~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~--------~--~--~~-----~~~~~~ 208 (241)
T PRK07454 150 ----PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV--------Q--A--DF-----DRSAML 208 (241)
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccccc--------c--c--cc-----ccccCC
Confidence 22357999999999988776543 48999999999987653211000 0 0 00 001347
Q ss_pred cHHHHHHHHHHHHhcCC
Q 035631 233 YCADVAEAFDVILHRGV 249 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~ 249 (684)
..+|+|+++..++.++.
T Consensus 209 ~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 209 SPEQVAQTILHLAQLPP 225 (241)
T ss_pred CHHHHHHHHHHHHcCCc
Confidence 89999999999998764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=149.95 Aligned_cols=201 Identities=17% Similarity=0.126 Sum_probs=144.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++|+||||+|+||.+++++|+++ |++|++++|+..... ...+. ....++.++.+|+.+.+++..+++.
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVE--AYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--HhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 899999999742111 01111 1134678899999999998877743
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||++|...... .+++....+++|+.++.++++++.. .+ .+++|++||...+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~---------- 150 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA---------- 150 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC----------
Confidence 37999999999754321 2233456789999999998888763 33 5789999986654321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|.+.+.+++.++.+ .+++++++||+.+..+...... ... +.+ ..++
T Consensus 151 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~-------~~~---~~~~ 208 (239)
T PRK07666 151 ----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG--------LTD-------GNP---DKVM 208 (239)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc--------ccc-------cCC---CCCC
Confidence 22356999999999998777644 4899999999998876321000 000 111 2357
Q ss_pred cHHHHHHHHHHHHhcC
Q 035631 233 YCADVAEAFDVILHRG 248 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~ 248 (684)
..+|+|+++..++.++
T Consensus 209 ~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 209 QPEDLAEFIVAQLKLN 224 (239)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 7899999999999865
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.8e-15 Score=145.76 Aligned_cols=220 Identities=18% Similarity=0.174 Sum_probs=151.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|.++ |++|++++|+... .....+.++++|+.|.+.+..++..
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPD---------DLPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhh---------hcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 8999999996421 1123578899999999887655421
Q ss_pred CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~--------- 145 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPL--------- 145 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC---------
Confidence 368999999995421 1223445667899999997776655 3433 5789999997654221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-----------HHHHHc-CCce
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKF-----------ILLAMK-GQQL 219 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~-----------~~~~~~-~~~~ 219 (684)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++... .+...+ ...+.. ...+
T Consensus 146 ----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T PRK06523 146 ----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV--ALAERLAEAAGTDYEGAKQIIMDSLGGI 219 (260)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH--HHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence 113457999999999998888755 3799999999999887421 111111 111100 0001
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
+. ..+...+|+++++..++... ..++.+.+.+|...|
T Consensus 220 p~-------~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 220 PL-------GRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred cc-------CCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 11 13456899999999998643 346788888765443
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=148.33 Aligned_cols=222 Identities=17% Similarity=0.161 Sum_probs=152.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc-ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL-KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+...... ..+. ....++.++.+|+.+.+++..++..
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELR--ALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 34589999999999999999999999 8999999987532110 1111 1134678999999999988777643
Q ss_pred -CCCCEEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|+|||+||..... ...++....++.|+.++.++.+++... ....+||++||...+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------- 146 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-------------- 146 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC--------------
Confidence 3789999999964321 112345567899999999988887531 11368999999765421
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH------HHHHHHHcCCceEEecCCCceE
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP------KFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|+..|.+++.++.+ .+++++.++|+.++++... ..+. .......... +. + .
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~--~~---~---~ 216 (258)
T PRK08628 147 QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE--NWIATFDDPEAKLAAITAKI--PL---G---H 216 (258)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH--HHhhhccCHHHHHHHHHhcC--Cc---c---c
Confidence 123457999999999999888654 4899999999999987421 1110 1111111111 11 0 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+...+|+|+++..++... ..++.+.+.++
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 217 RMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred cCCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence 4577899999999999653 34567777644
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-15 Score=147.00 Aligned_cols=221 Identities=19% Similarity=0.128 Sum_probs=148.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|+||++++++|+++ |+.|+..+|+.. ....+... ...+++++.+|+.+.+++..++..
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVE--KLEALAAE-LGERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 788888877532 12111111 123578889999999988776532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....+||++||...+....
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------- 147 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC-----------
Confidence 3699999999975422 122345667899999999888876431 1257999999965432111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
....|+.+|...+.+++.++.+ .++++++++|+.+..+... .............. + ...+...
T Consensus 148 ---~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~--~-------~~~~~~~ 213 (245)
T PRK12936 148 ---GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG--KLNDKQKEAIMGAI--P-------MKRMGTG 213 (245)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc--ccChHHHHHHhcCC--C-------CCCCcCH
Confidence 1245999999888887776554 3799999999988654321 11111111111111 1 1235678
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+|+++++..++.... .++.+++.+|.
T Consensus 214 ~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 214 AEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred HHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 999999988875432 46788888663
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=148.53 Aligned_cols=206 Identities=18% Similarity=0.124 Sum_probs=140.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----CCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----EGI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 87 (684)
|+|+||||+|+||.++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+.+..++.. .++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQE--RLQELKDE-LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999 899999999642 22221111 123678899999999888776632 379
Q ss_pred CEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 88 d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
|+|||+||.... ..+.++....+++|+.++..+++++ ++.+ ..++|++||...+. +
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--------------~ 140 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--------------P 140 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC--------------C
Confidence 999999996421 1233445667899999966555554 4444 67999999965431 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
..+...|+.+|...|.+.+.++.+. ++.+.+++||.+.|+......+... ..... . .+. ...++..+
T Consensus 141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~-~~~~~--~---~~~----~~~~~~~~ 210 (248)
T PRK10538 141 YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAE--K---TYQ----NTVALTPE 210 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCc-HHHHH--h---hcc----ccCCCCHH
Confidence 2234579999999999998887653 7889999999998764211000000 00000 0 000 11346889
Q ss_pred HHHHHHHHHHhcC
Q 035631 236 DVAEAFDVILHRG 248 (684)
Q Consensus 236 D~a~~i~~~~~~~ 248 (684)
|+|++++.++..+
T Consensus 211 dvA~~~~~l~~~~ 223 (248)
T PRK10538 211 DVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=150.80 Aligned_cols=166 Identities=21% Similarity=0.207 Sum_probs=120.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
|+++||||||+|+||++++++|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+.+..++. .++|
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id 75 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAP--QVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-WDVD 75 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCC
Confidence 3578999999999999999999999 899999998642 1111110 0112358889999999999888763 4899
Q ss_pred EEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||.......+ +.....+++|+.++.++.+. +++.+ .++||++||...+... .
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~--------------~ 140 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG--------------P 140 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC--------------C
Confidence 999999975432222 22345678888887766554 34445 5899999996543211 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCcee
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVY 196 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 196 (684)
....|+.+|...|.+.+.+..+ .+++++++||+++.
T Consensus 141 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 141 FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 2357999999999988776543 58999999999864
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-16 Score=156.02 Aligned_cols=222 Identities=18% Similarity=0.132 Sum_probs=145.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-----------------------------------eEeeeeccCC------ChhH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-----------------------------------AFEFGTGRLE------DKNS 410 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-----------------------------------~v~~~~~d~~------d~~~ 410 (684)
+++|+||||||+|.+|+..|+.+-. +|+.+.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999997754 2367778876 5667
Q ss_pred HHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCC
Q 035631 411 LLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 411 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
+.++.+.+ |.|||.|+.+ + | ..........||.||..+++.|...+.| +.|+||.+|+.........+.
T Consensus 81 ~~~La~~v--D~I~H~gA~V---n--~-v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~-- 150 (382)
T COG3320 81 WQELAENV--DLIIHNAALV---N--H-VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVD-- 150 (382)
T ss_pred HHHHhhhc--ceEEecchhh---c--c-cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccc--
Confidence 78888888 9999999966 3 2 4556688999999999999999998776 999999999864322211111
Q ss_pred CccCCCCC----CCCChhhhhhHhHhhhhh-HHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHH
Q 035631 490 FKEDDEPN----FTRSFYSKTKAMVTFLSY-LEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 490 ~~e~~~~~----~p~~~Y~~sK~~~E~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 564 (684)
.+|.++.. .+.++|+.||..+|.++. .-.++.++.+.|+.++.+.--.+. .+.+||+.
T Consensus 151 ~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~-----------------~n~~D~~~ 213 (382)
T COG3320 151 FDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGA-----------------LNTRDFLT 213 (382)
T ss_pred cccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCc-----------------cccchHHH
Confidence 12222211 256899999999998843 345578888888884432211111 13346666
Q ss_pred Hhhhc----cccc--ccCCCccchhhHHHHHHHHHh-----------cC--ccceeE-ecCCCcccHHHHHHHHHh
Q 035631 565 KLARY----NKVV--NIPNSMTVLDEMLPIAIEMAR-----------RN--CRGAWN-FTNPGVISHNEILELYKE 620 (684)
Q Consensus 565 ~~~~~----~~~~--~~~~~~i~v~D~~~~~~~~~~-----------~~--~~g~~n-i~~~~~~s~~e~~~~i~~ 620 (684)
+++.. +..+ ....+.+.+|.+++++..... .+ ....|+ ..-|..+.+.++++.+.+
T Consensus 214 Rlv~~~~~lg~~P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 214 RLVLGLLQLGIAPDSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred HHHHHHHHhCCCCCcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 55433 2222 112233444444444333222 11 123344 233778999999998887
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=143.97 Aligned_cols=218 Identities=14% Similarity=0.105 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||+|.||.+++++|+++ |++|++++|+... ...+.++.+|+.|.+++.+++..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~-----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPS-----------YNDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999986421 12578899999999988776642
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||...... ..++....+++|+.++..+++++... ....++|++||...+..
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 137 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV------------- 137 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-------------
Confidence 26999999999754322 22334566899999999988877531 12579999999766532
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC------ChHHHHHHHHHcCCceEEecCCCceE
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPE------KLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|+..+.+.+.++.+. .+++..++||++-.+..... ............ +.......
T Consensus 138 -~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 210 (258)
T PRK06398 138 -TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMK 210 (258)
T ss_pred -CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcC
Confidence 2234579999999999999887764 37889999998865421000 000000000000 00000112
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+...+|+|++++.++... ..++.+.+.+|.
T Consensus 211 ~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 211 RVGKPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred CCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 3567899999999988643 246677776553
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=169.89 Aligned_cols=231 Identities=18% Similarity=0.135 Sum_probs=159.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. .....++..+.+|+.|.+.+..++..
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~--~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEA--AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHH--HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999 8899999997522 111110 01114678899999999988776642
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+.....+++|+.++.++++++. +.+.-.+||++||...+...
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----------- 565 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG----------- 565 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------
Confidence 2799999999965432 1223455678999999999977764 33312689999997654221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCcee-CCCCCCCChHHHHHHHHHcCCce----EEecCCCce
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVY-GPNQFPEKLIPKFILLAMKGQQL----PIHGNGSNV 228 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 228 (684)
.....|+.+|...+.+++.++.+. ++++.+++|+.+| +.+......... .....+... ..+..+...
T Consensus 566 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~l 640 (681)
T PRK08324 566 ---PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEA--RAAAYGLSEEELEEFYRARNLL 640 (681)
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhh--hhhhccCChHHHHHHHHhcCCc
Confidence 123579999999999999887664 5899999999998 654322211100 111111110 112334455
Q ss_pred EecccHHHHHHHHHHHHhc---CCCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHR---GVIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~---~~~~~~~ni~~~~~ 261 (684)
+.+++++|+|+++..++.. ...+++|++.+|..
T Consensus 641 ~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 641 KREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred CCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 6889999999999998842 33578999988754
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=148.07 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=150.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++||||||+|+||.++++.|+++ |++|++++|+........... .....+.++.+|+.+.+.+..++.. .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTNWDETRRLIE-KEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 899999988632111111111 1124678899999999988776642 2
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|++||+||..... ...++.+..+++|+.++..+.+++. +.+ ..++|++||...+....
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 158 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGK----------- 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCC-----------
Confidence 689999999975421 1223455678899999877776654 333 57999999977653221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
....|+.+|.+.+.+.+.++++. +++++.++||.+..+.......-.......... ++ ...+...
T Consensus 159 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~ 226 (258)
T PRK06935 159 ---FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEP 226 (258)
T ss_pred ---CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCH
Confidence 12469999999999998887764 789999999998776321100001111111111 11 1235677
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+|++.++..++... ..+.++.+.+|
T Consensus 227 ~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 227 DDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 99999999888643 25677777655
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-15 Score=147.43 Aligned_cols=223 Identities=12% Similarity=0.058 Sum_probs=150.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||.+++++|+++ |++|++++|+.. ....+... ....++.++.+|+.+.+.+.+++..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTES--QLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999642 11111110 1124578889999999988776642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...++....+++|+.++.++++++.. .....++|++||.....
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------- 152 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------- 152 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------
Confidence 3799999999964322 22244567889999999999999864 12257899999954321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
+..+...|+.+|...+.+++.++.+. .++++.++|+.+..+......--..+........+ ...+.
T Consensus 153 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 220 (263)
T PRK07814 153 ---AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLG 220 (263)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCc
Confidence 12234579999999999998887764 46788899998865422100000111111111111 11245
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+|+|++++.++... ..++.+.+.++
T Consensus 221 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 221 DPEDIAAAAVYLASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 7899999999998653 24566666544
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=142.35 Aligned_cols=214 Identities=18% Similarity=0.194 Sum_probs=146.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 88 (684)
+++++++||||+|+||+++++.|+++ |++|++++|+... ....++.++.+|+.+. +.++++. .++|
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~--~~~~~~~~~~id 69 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKP---------DLSGNFHFLQLDLSDD--LEPLFDWVPSVD 69 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCccc---------ccCCcEEEEECChHHH--HHHHHHhhCCCC
Confidence 35579999999999999999999999 8999999986421 1124578889999887 3333322 4799
Q ss_pred EEEEcCccCC-----cCCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTH-----VDNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||... .....++....+++|+.++.++++++... ....++|++||...+... .
T Consensus 70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~ 135 (235)
T PRK06550 70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG--------------G 135 (235)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC--------------C
Confidence 9999999642 12222345667899999999999887531 124689999997654221 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.++.++ ++++++++|+++.++.......-..+........+ ...+...+|+
T Consensus 136 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 206 (235)
T PRK06550 136 GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEV 206 (235)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHH
Confidence 23469999999999888877654 89999999999987743211111111122222111 1235678999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCC
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|++++.++... ..+.++.+.+|
T Consensus 207 a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 207 AELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHHHHcChhhccCCCcEEEECCc
Confidence 99999998643 24567777655
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-15 Score=146.78 Aligned_cols=220 Identities=15% Similarity=0.183 Sum_probs=149.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
++++||||||+|+||+++++.|+++ |++|+...++.. .....+... ...++.++++|+.+.+.+..++...
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSE-DAAEALADE-LGDRAIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCH-HHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3478999999999999999999999 899988765321 111111111 1246788999999998887776431
Q ss_pred -CCCEEEEcCccCC----------cCCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCC
Q 035631 86 -GIDTIMHFAAQTH----------VDNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 86 -~~d~Vih~a~~~~----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.+|+|||+|+... ...++++....+++|+.++.++++++.. .+ ..++|++||.....
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~------- 151 (253)
T PRK08642 80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN------- 151 (253)
T ss_pred CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC-------
Confidence 3999999998531 1112233456789999999999999853 23 57999999853221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
+..+.+.|+.+|.+.|.+++.+++++ ++++..++||++-.+.... ...+.......... +.
T Consensus 152 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~-~~~~~~~~~~~~~~--~~------ 215 (253)
T PRK08642 152 -------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA-ATPDEVFDLIAATT--PL------ 215 (253)
T ss_pred -------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc-cCCHHHHHHHHhcC--Cc------
Confidence 22345679999999999999987763 6889999999886542211 11122222222211 11
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+.+.+|+++++..++... ..|+.+.+.++
T Consensus 216 -~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 216 -RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred -CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 24688999999999999643 35677777655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.3e-15 Score=146.41 Aligned_cols=223 Identities=17% Similarity=0.115 Sum_probs=149.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+++++||||||+|+||.+++++|++. |++|++++|+.. ....+... .....+..+++|+.+.+.+..++..
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLD--GCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 455689999999999999999999999 899999999642 11111110 1123567889999999887766532
Q ss_pred ---CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+|+.... ....+.....+++|+.++..+++++ ++.+ ..++|++||...+.
T Consensus 81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--------- 150 (252)
T PRK07035 81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVS--------- 150 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcC---------
Confidence 268999999996421 1222334567899999998888776 3333 57999999864432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+..+...|+.+|++.|.+++.++.+. +++++.+.||.+-.+......-............+ ..
T Consensus 151 -----~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~ 216 (252)
T PRK07035 151 -----PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LR 216 (252)
T ss_pred -----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CC
Confidence 11234579999999999999887654 78999999998865422100000111212221111 11
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+...+|+|+++..++.+. ..++.+.+.++
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 217 RHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred CcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 3456899999999988653 24566766544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=148.17 Aligned_cols=208 Identities=18% Similarity=0.133 Sum_probs=140.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc------C
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS------E 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 85 (684)
+++|+||||+|+||+++++.|+++ |++|++++|+.. ..+.+. ..+++.+.+|+.|.+++..++.. .
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPD--DVARMN----SLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HhHHHH----hCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999 889999999642 121111 12578899999998876655422 3
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHH----HHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVL----LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|.+||++|..... ...+.....++.|+.++.++ ++++++.+ .+++|++||...+..
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~------------- 139 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIS------------- 139 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccC-------------
Confidence 689999999964321 12233456789999888775 56666655 689999999643321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYH---RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
......|+.+|...|.+.+.+. ...+++++++||+.+..+.. ..+. ...... +....+...+.+++.
T Consensus 140 -~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~------~~~~-~~~~~~--~~~~~~~~~~~~~~~ 209 (256)
T PRK08017 140 -TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT------DNVN-QTQSDK--PVENPGIAARFTLGP 209 (256)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh------hccc-chhhcc--chhhhHHHhhcCCCH
Confidence 1224579999999998876543 34589999999987754321 0100 000011 111222233567999
Q ss_pred HHHHHHHHHHHhcCCCC
Q 035631 235 ADVAEAFDVILHRGVIG 251 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~~~ 251 (684)
+|+++++..++.++...
T Consensus 210 ~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 210 EAVVPKLRHALESPKPK 226 (256)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 99999999999876543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-15 Score=145.14 Aligned_cols=223 Identities=15% Similarity=0.046 Sum_probs=151.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|+||++++++|+++ |++|++.+|+.. ....+... ....++..+.+|+.|.+.+..++..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAE--RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHH--HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999998642 11111100 1123567888999999988776632
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++..+++++... ....+||++||.....
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------ 150 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL------------ 150 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc------------
Confidence 3689999999965321 222345568899999988888877542 1257999999864321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
+..+...|+.+|...+.+++.++.+ +++++..++||++..+......-...+........+ ...+.
T Consensus 151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~ 219 (254)
T PRK08085 151 --GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWG 219 (254)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCc
Confidence 1123457999999999999988766 389999999999988743110000112222222111 12356
Q ss_pred cHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 233 YCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
..+|++.++..++.... .+++..+.+|
T Consensus 220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 220 DPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 78999999998886432 4566666554
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-15 Score=146.39 Aligned_cols=220 Identities=14% Similarity=0.096 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
+++++||||||+|+||+++++.|+++ |++|+++ +|+..... ...+.. ...++.++.+|+.|.+.+..++...
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKE--EGGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45679999999999999999999999 8999998 88642110 011111 1345788999999999887766322
Q ss_pred ----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|+|||++|...... ..+..+..+++|+.++.++++++.. .+ .+++|++||...+....
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~------- 150 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGAS------- 150 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCC-------
Confidence 7999999999763221 1223456788999998888877753 33 57899999976543211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
....|+.+|...+.+++.++.+ .+++++.+||+.+..+... ...+.......... ....
T Consensus 151 -------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~--~~~~~~~~~~~~~~---------~~~~ 212 (247)
T PRK05565 151 -------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWS--SFSEEDKEGLAEEI---------PLGR 212 (247)
T ss_pred -------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccc--ccChHHHHHHHhcC---------CCCC
Confidence 1246999999988888777654 3899999999998765321 11111111111111 1124
Q ss_pred cccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
+...+|+++++..++.... .++.+++..+
T Consensus 213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 213 LGKPEEIAKVVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred CCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence 5688999999999986533 4567777654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.9e-15 Score=145.74 Aligned_cols=213 Identities=17% Similarity=0.104 Sum_probs=147.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+++++|+||||+|+||++++++|+++ |++|++++|++. ....+.. .....+++++.+|+.+.+++..++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQK--ELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHH--HHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 44589999999999999999999998 899999999742 1111110 11114688899999999988776642
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+++..... ...++....+++|+.++.++++++.+. ...+++|++||...+..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------- 146 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF------------- 146 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-------------
Confidence 2799999999875432 122334567889999999998887642 12478999999655421
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
..+...|+.+|+..+.+.+.+..+ .+++++++||+.+..+...... .. .....+..
T Consensus 147 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----------~~---------~~~~~~~~ 205 (237)
T PRK07326 147 -FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----------SE---------KDAWKIQP 205 (237)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-----------ch---------hhhccCCH
Confidence 123456999999999888776543 4899999999998765321100 00 00013678
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEecCCC
Q 035631 235 ADVAEAFDVILHRGVI--GHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~~--~~~~ni~~~~ 260 (684)
+|+++++..++..+.. .....+..+.
T Consensus 206 ~d~a~~~~~~l~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 206 EDIAQLVLDLLKMPPRTLPSKIEVRPSR 233 (237)
T ss_pred HHHHHHHHHHHhCCccccccceEEecCC
Confidence 9999999999976542 3345554443
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-15 Score=145.41 Aligned_cols=221 Identities=15% Similarity=0.124 Sum_probs=152.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+....... .......+..+.+|+.+.+++..++.. .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEVA---AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH---HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4589999999999999999999999 89999999975321111 111123567889999999988776643 2
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
++|+|||++|...... ..++....+++|+.++.++++++... ....+||++||.......
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 155 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------------- 155 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-------------
Confidence 6899999999754321 22344557899999999999988642 125799999996543111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.....|+.+|...+.+.+.++.+ .++++..++|+.+..+.... .............. + ...+.+.+
T Consensus 156 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~--~-------~~~~~~~~ 224 (255)
T PRK06841 156 -ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK-AWAGEKGERAKKLI--P-------AGRFAYPE 224 (255)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc-ccchhHHHHHHhcC--C-------CCCCcCHH
Confidence 12246999999999998888766 37999999999987763211 00011111111111 1 12567899
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
|++++++.++... ..++++.+.+|.
T Consensus 225 ~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 225 EIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHHHHHHHcCccccCccCCEEEECCCc
Confidence 9999999999753 256777877654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-15 Score=147.22 Aligned_cols=225 Identities=13% Similarity=0.098 Sum_probs=154.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcE-EEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYE-IVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+..++|+||||+|+||+.+++.|+++ |++ |++++|+..... ...+. .....+.++.+|+.+.+++.+++..
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELE--ALGAKAVFVQADLSDVEDCRRVVAAA 78 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHH--hcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 345689999999999999999999999 788 999998642111 00111 1123577889999999988777643
Q ss_pred ----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||++|..... ...+.....+++|+.++.++++++.. .+...++|++||...++...
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------ 152 (260)
T PRK06198 79 DEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP------ 152 (260)
T ss_pred HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC------
Confidence 2689999999975422 12223345789999999999888753 22235899999987765321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC--C---ChHHHHHHHHHcCCceEEecC
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP--E---KLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~--~---~~~~~~~~~~~~~~~~~~~~~ 224 (684)
....|+.+|...|.+++.++.++ +++++.++|++++++.... . .....+........
T Consensus 153 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------- 217 (260)
T PRK06198 153 --------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ------- 217 (260)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC-------
Confidence 23569999999999998887654 6889999999998875310 0 01111222222111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+++.+|+++++..++... ..++++.+.++.
T Consensus 218 --~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 218 --PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred --CccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 1224578999999999988543 356778877654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.6e-15 Score=145.57 Aligned_cols=223 Identities=17% Similarity=0.126 Sum_probs=148.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++++||||+|.||.+++++|+++ |++|++++|+.. ....+... ....++.++.+|+.+.+++..++..
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQA--ELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34579999999999999999999999 899999999742 22111110 1123577889999999987776642
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|+|||+||.... ....++....+++|+.++..+.+++ ++.+ ..++|++||...+...
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~-------- 150 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG-------- 150 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC--------
Confidence 279999999997432 1122345667899998777665544 4443 5789999997654211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
..+...|+.+|++.+.+.+.++.+. ++++..++||.+-.+........+..........+ ...
T Consensus 151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~ 216 (254)
T PRK07478 151 -----FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKR 216 (254)
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCC
Confidence 1223579999999999998887664 68999999999876521100000111111111111 113
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|++++.++.+. ..++++.+.++
T Consensus 217 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 217 MAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred CcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 457899999999988653 24667776554
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=143.45 Aligned_cols=220 Identities=12% Similarity=0.079 Sum_probs=148.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~ 87 (684)
.+++++||||||+|.||+++++.|+++ |++|+...++.. .....+.. ..++..+.+|+.|.+.+.+.+.. .++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~-~~~~~l~~---~~~~~~~~~D~~~~~~~~~~~~~~~~i 76 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSK-DAAERLAQ---ETGATAVQTDSADRDAVIDVVRKSGAL 76 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCH-HHHHHHHH---HhCCeEEecCCCCHHHHHHHHHHhCCC
Confidence 345689999999999999999999999 889988766421 11111111 11356788999999888777654 358
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT 162 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 162 (684)
|+|||+||..... ...++....+++|+.++..++..+... ....++|++||.... ..+..+.
T Consensus 77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-------------~~~~~~~ 143 (237)
T PRK12742 77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD-------------RMPVAGM 143 (237)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc-------------cCCCCCC
Confidence 9999999975321 223345678899999999887665542 224699999995431 0122345
Q ss_pred ChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
..|+.+|+..|.+++.++.+ .++++++++||.+..+...... + .........+ . ..+...+|+++
T Consensus 144 ~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~-~~~~~~~~~~--~-------~~~~~p~~~a~ 211 (237)
T PRK12742 144 AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--P-MKDMMHSFMA--I-------KRHGRPEEVAG 211 (237)
T ss_pred cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--H-HHHHHHhcCC--C-------CCCCCHHHHHH
Confidence 67999999999999887665 3799999999999766421111 1 1111111111 1 13467899999
Q ss_pred HHHHHHhcC---CCCcEEEecCC
Q 035631 240 AFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 240 ~i~~~~~~~---~~~~~~ni~~~ 259 (684)
++..++... ..+..+.+.++
T Consensus 212 ~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 212 MVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHHcCcccCcccCCEEEeCCC
Confidence 999988653 24566666544
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=145.16 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=150.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|+++||||||+|+||+++++.|+++ |++|+++.++.... ...+.. .....++.++.+|+.+.+.+..++..
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEG-AKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR 77 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 89998886643211 111100 01134688899999999887666532
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|+|||++|..... ...++....+.+|+.++.++++++... +...++|++||....
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------- 144 (256)
T PRK12743 78 LGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------------- 144 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-------------
Confidence 3689999999975432 122345567899999999999887642 213689999995321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+..+...|+.+|...+.+++.++.+ ++++++.++||.+.++..... ............ +. ..+.
T Consensus 145 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~--~~-------~~~~ 212 (256)
T PRK12743 145 -TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGI--PL-------GRPG 212 (256)
T ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcC--CC-------CCCC
Confidence 12334568999999999998887764 379999999999998743111 111111111111 11 1235
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+|++.++..++... ..+.++.+.++.
T Consensus 213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 7899999998888643 246677776553
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.9e-15 Score=144.51 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=148.5
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----CCC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----EGI 87 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 87 (684)
||||||+|+||++++++|+++ |++|++++|+... ....+.. ......+.++.+|+.|.+++..++.. ..+
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEE-GAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchh-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999 8999999886421 1111110 01123577899999999988777633 368
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcc-cccCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDE-VYGETDMESDIGNPEASQL 159 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~-vyg~~~~~~~~~~~e~~~~ 159 (684)
|+|||++|..... ...+.++..++.|+.++.++++++... ...++||++||.. +||..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-------------- 143 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-------------- 143 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC--------------
Confidence 9999999975421 222345677899999999999988652 1257999999964 44421
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
+...|+.+|...+.+++.++++ .+++++++||+.+.++... .....+........+ ...+.+++|
T Consensus 144 -~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~ 211 (239)
T TIGR01830 144 -GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD--KLSEKVKKKILSQIP---------LGRFGTPEE 211 (239)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh--hcChHHHHHHHhcCC---------cCCCcCHHH
Confidence 2346999999999888777654 4889999999988665321 111122222222211 113567899
Q ss_pred HHHHHHHHHhcC---CCCcEEEecCC
Q 035631 237 VAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 237 ~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+++++..++... ..+++||+.++
T Consensus 212 ~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 212 VANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 999999888543 25678998754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=150.79 Aligned_cols=206 Identities=11% Similarity=0.057 Sum_probs=130.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCC-hhHHHHHH-HhcCCCeEEEcce
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLED-KNSLLDDM-KRVRPTHVLNAAG 428 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d-~~~~~~~~-~~~~~d~Vih~a~ 428 (684)
+|+||||||||+||++++++|+++|++| .++.+|++| .+.+.+.+ .+ +|+|||+++
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~--~d~vi~~~g 94 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDD--SDAVICATG 94 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcC--CCEEEECCC
Confidence 3699999999999999999999999876 345578877 35565555 34 599999988
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhh
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK 507 (684)
... ..++...+++|..++.++++++.+.++ ++|++||..+|+.....+ ..+......+...|..+|
T Consensus 95 ~~~-------~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~------~~~~~~~~~~~~~~~~~k 161 (251)
T PLN00141 95 FRR-------SFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQI------LNPAYIFLNLFGLTLVAK 161 (251)
T ss_pred CCc-------CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccc------cCcchhHHHHHHHHHHHH
Confidence 431 112234467899999999999998876 699999999997432222 111110000222344567
Q ss_pred HhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHH
Q 035631 508 AMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLP 587 (684)
Q Consensus 508 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~ 587 (684)
..+|.+.. ..+..+.+.|+..++..... ....+.........+ |+.+|+|+
T Consensus 162 ~~~e~~l~--~~gi~~~iirpg~~~~~~~~----------~~~~~~~~~~~~~~~-----------------i~~~dvA~ 212 (251)
T PLN00141 162 LQAEKYIR--KSGINYTIVRPGGLTNDPPT----------GNIVMEPEDTLYEGS-----------------ISRDQVAE 212 (251)
T ss_pred HHHHHHHH--hcCCcEEEEECCCccCCCCC----------ceEEECCCCccccCc-----------------ccHHHHHH
Confidence 77775432 23455555665533321100 000010000001134 99999999
Q ss_pred HHHHHHhcCc--cceeEecC---CCcccHHHHHHHHHh
Q 035631 588 IAIEMARRNC--RGAWNFTN---PGVISHNEILELYKE 620 (684)
Q Consensus 588 ~~~~~~~~~~--~g~~ni~~---~~~~s~~e~~~~i~~ 620 (684)
++..++.++. ..++.+.+ +...++++++..+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 213 VAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 9999998763 45677765 334789999887764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-14 Score=143.33 Aligned_cols=220 Identities=17% Similarity=0.158 Sum_probs=148.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+|+++||||+|.||+++++.|+++ |++|+++.++.. .....+.. .++.++.+|+.|.+++.+++.. .
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~-~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAE-NEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcH-HHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999 899988866431 11122211 2578899999999988877643 2
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHH----HHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVL----LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||.... ....++....+++|+.++..+ +..+++.+ ..++|++||...++..
T Consensus 79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------------ 145 (255)
T PRK06463 79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTA------------ 145 (255)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCC------------
Confidence 68999999997532 122334556789999996555 44444443 5799999998776421
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP---EKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
......|+.+|++.+.+++.++.+ .++++..++|+++-.+.... ......+........+ ...+
T Consensus 146 -~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 215 (255)
T PRK06463 146 -AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTT 215 (255)
T ss_pred -CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCC
Confidence 112356999999999999888765 47999999999885442110 0111111111111111 1234
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+|++++++.++... ..+..+.+.+|.
T Consensus 216 ~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 216 GKPEDIANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred cCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 67899999999998653 356788887664
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-15 Score=148.31 Aligned_cols=197 Identities=15% Similarity=0.161 Sum_probs=139.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
+|+||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++.+++.. .
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTD--ALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999 899999998742 1111111 11112688999999999988776532 2
Q ss_pred CCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHH----HHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLE----ACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.+|+|||+||..... ...++....+++|+.++.++++ ++++.+ ..++|++||...+...
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~----------- 145 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGL----------- 145 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC-----------
Confidence 489999999975421 1223456788999999998777 444444 5799999986553211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|+..+.+.+.++. .++++++++||+.+.++..... .. . . ..++.
T Consensus 146 ---~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~--~---~----~~~~~ 201 (257)
T PRK07024 146 ---PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN------------PY--P---M----PFLMD 201 (257)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC------------CC--C---C----CCccC
Confidence 1234699999999999877753 3589999999999987632100 00 0 0 01356
Q ss_pred HHHHHHHHHHHHhcC
Q 035631 234 CADVAEAFDVILHRG 248 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~ 248 (684)
.+++++.++.++.+.
T Consensus 202 ~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 202 ADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHHHHhCC
Confidence 899999999999754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=144.76 Aligned_cols=224 Identities=14% Similarity=0.096 Sum_probs=152.6
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
..+.+++|+||||+|+||++++++|+++ |++|++++|+.. ....+... ....++.++.+|+.+.+.+..++..
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAA--TLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999 899999999742 11111110 1124578999999999887766532
Q ss_pred ----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||++|..... ...++....+++|+.++.++.+++.. .+ ..++|++||...+...
T Consensus 83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------- 154 (256)
T PRK06124 83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR------- 154 (256)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC-------
Confidence 3679999999975422 22234556789999999999866643 44 5799999996543211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|...+.+++.++.+ .++++..++|+.+.++..........+........ + ..
T Consensus 155 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~ 218 (256)
T PRK06124 155 -------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRT--P-------LG 218 (256)
T ss_pred -------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcC--C-------CC
Confidence 12357999999999998877655 37999999999999874211100111111222111 1 12
Q ss_pred ecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.+++.+|+++++..++.... .++.+.+.++
T Consensus 219 ~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred CCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 46889999999999997642 3555565544
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=145.05 Aligned_cols=207 Identities=16% Similarity=0.068 Sum_probs=141.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|+|+||||+|+||++++++|+++ |++|++++|+.. ..+.+.. ......+.++.+|+.+.+++..++.. .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEE--GGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999 899999998642 1111100 01134678899999999888776632 3
Q ss_pred CCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||........ ++....+++|+.++.++.++ +++.+ ..++|++||...+...
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~------------ 143 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQG------------ 143 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCC------------
Confidence 799999999976432222 23344678898877776655 45554 6899999997665321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|+..+.+.+.++.+ .++++++++|+.+..+..... ...+......... ....+++
T Consensus 144 --~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 211 (270)
T PRK05650 144 --PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL----------LEKSPIT 211 (270)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH----------hhcCCCC
Confidence 22357999999998888887766 378999999999987643110 0011111111000 0113478
Q ss_pred HHHHHHHHHHHHhcC
Q 035631 234 CADVAEAFDVILHRG 248 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~ 248 (684)
++|+|+.++.++.+.
T Consensus 212 ~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 212 AADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999853
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-15 Score=147.49 Aligned_cols=226 Identities=16% Similarity=0.134 Sum_probs=147.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|++++|||||+|+||+++++.|+++ |++|++++|+... ...+... ....++.++++|+.+.+.+.+++..
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEET--AQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT 76 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 8999999986421 1111110 1124577899999999987776642
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||...... ..+.....+++|+.++..+++++.. .+...++|++||...+...
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 146 (256)
T PRK08643 77 FGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---------- 146 (256)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----------
Confidence 36899999998753221 1233456788999998877766653 2223689999986543211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHH--cCCceEE----ecCCC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAM--KGQQLPI----HGNGS 226 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~ 226 (684)
.....|+.+|...+.+++.++.+ .+++++.++|+++.++... .+..... .+.+... +-...
T Consensus 147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (256)
T PRK08643 147 ----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF------DIAHQVGENAGKPDEWGMEQFAKDI 216 (256)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh------HHHhhhccccCCCchHHHHHHhccC
Confidence 12356999999999998887765 4789999999999776321 0000000 0000000 00000
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+...+|+|.++..++... ..+..+.+-+|.
T Consensus 217 ~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 217 TLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence 0113467899999999998643 356677776553
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3e-15 Score=138.95 Aligned_cols=205 Identities=16% Similarity=0.172 Sum_probs=152.2
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
..-|.|||||+|.+++.+|.+.|-+| -+...|+.|.+++..+.+.. .+|||+.|
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~s--NVVINLIG- 139 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHS--NVVINLIG- 139 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhC--cEEEEeec-
Confidence 46899999999999999999999765 56778899999999999988 99999998
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.++ +...-.+.++|+.+...|++.|++.|+ |+|++|+-. .+ .. ..+-|=.+|+
T Consensus 140 -----rd~-eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg-----an--------------v~-s~Sr~LrsK~ 193 (391)
T KOG2865|consen 140 -----RDY-ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG-----AN--------------VK-SPSRMLRSKA 193 (391)
T ss_pred -----ccc-ccCCcccccccchHHHHHHHHHHhhChhheeehhhcc-----cc--------------cc-ChHHHHHhhh
Confidence 333 334447899999999999999999998 799999863 11 11 3467889999
Q ss_pred hHhhhhhHHhhhhhhhhhhhhhhhH--HHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHH
Q 035631 509 MVTFLSYLEIFVLVICIECLINFQV--EGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEML 586 (684)
Q Consensus 509 ~~E~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~ 586 (684)
++|.....+.. ..++.|+..+++ ++++..+..+...--.+++++.|+.... .+|||-|+|
T Consensus 194 ~gE~aVrdafP--eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K----------------~PVyV~DVa 255 (391)
T KOG2865|consen 194 AGEEAVRDAFP--EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVK----------------QPVYVVDVA 255 (391)
T ss_pred hhHHHHHhhCC--cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceee----------------ccEEEehHH
Confidence 99876444333 234445554432 2233333333332222455555543222 349999999
Q ss_pred HHHHHHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCC
Q 035631 587 PIAIEMARRN--CRGAWNFTNPGVISHNEILELYKEYIDP 624 (684)
Q Consensus 587 ~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~ 624 (684)
.+|+.++..+ .+.+|-+++|+.+.+.|+++.+-+....
T Consensus 256 a~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 256 AAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred HHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence 9999999877 3459999999999999999999877764
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.5e-15 Score=146.57 Aligned_cols=204 Identities=22% Similarity=0.102 Sum_probs=141.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc------cC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV------SE 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~ 85 (684)
|++||||||||+||++++++|+++ |++|++++|+.. ....+........+.++.+|+.+.+.+.+++. ..
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEA--GLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH--HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999 899999998642 22211111113468899999999998877664 24
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccc-ccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEV-YGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~ 156 (684)
++|+|||+||...... ..++.+..+++|+.++.++++++.. .+ ..++|++||... ||..
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------- 144 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQP----------- 144 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCC-----------
Confidence 6899999999764322 2234567889999999999888753 33 578999998644 3321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|...+.+.+.++.+ .++++++++|+.+-.+...... .......... ....+.
T Consensus 145 ----~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~-----------~~~~~~ 207 (260)
T PRK08267 145 ----GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTKR-----------LGVRLT 207 (260)
T ss_pred ----CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHhh-----------ccCCCC
Confidence 1346999999999999888654 3799999999998654321100 0000000000 011256
Q ss_pred HHHHHHHHHHHHhcC
Q 035631 234 CADVAEAFDVILHRG 248 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~ 248 (684)
.+|++++++.++...
T Consensus 208 ~~~va~~~~~~~~~~ 222 (260)
T PRK08267 208 PEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHHhCC
Confidence 799999999999653
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=145.08 Aligned_cols=222 Identities=13% Similarity=0.116 Sum_probs=152.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC----CCCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH----PSRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
+.+++++||||+|.||+++++.|.++ |++|++++|+.. ....+. .......+.++.+|+.+.+++..++..
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDAD--ALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 35689999999999999999999999 899999998642 211111 111124678889999999887665532
Q ss_pred ----CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....++....+.+|+.++.++++++. +.+ ..++|++||...+...
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~------- 154 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHV------- 154 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCC-------
Confidence 368999999997432 22334556778999999999988874 333 5799999997665322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.+...|+.+|...+.+++.++.+ .+++++.++|+++.++..........+........++.
T Consensus 155 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~--------- 218 (257)
T PRK09242 155 -------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMR--------- 218 (257)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCC---------
Confidence 22356999999999999887655 37999999999998874321111122222222222211
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|++.++..++... ..++.+.+.++
T Consensus 219 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 219 RVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 2345799999999888643 24567777654
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=144.28 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=143.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|+++||||||+|+||+.+++.|+++ |++|+++.++.. .....+.. .....++..+.+|+.+.+++.+++..
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDA-AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA 77 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999 888877654321 11111100 01124678899999999887766532
Q ss_pred -CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHh-cC-----CCcEEEEEeCccc-ccCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKL-TG-----QVKRFIHVSTDEV-YGETDMESDI 151 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~-~~-----~~~~~i~~SS~~v-yg~~~~~~~~ 151 (684)
.++|+|||+||..... ...++....+++|+.++..+++++.. .. .-.+||++||... ++...
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----- 152 (248)
T PRK06947 78 FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----- 152 (248)
T ss_pred cCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-----
Confidence 3699999999975321 12223445689999999888754432 21 1246999998654 33211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
....|+.+|...+.+++.++.+. +++++++|||++..+....... +..........+ .
T Consensus 153 ---------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~------- 213 (248)
T PRK06947 153 ---------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ-PGRAARLGAQTP--L------- 213 (248)
T ss_pred ---------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC-HHHHHHHhhcCC--C-------
Confidence 12359999999999988887664 7999999999998874311111 111111111111 0
Q ss_pred EecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.-....+|++++++.++.++. .++.+.+.++
T Consensus 214 ~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 214 GRAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 013567999999999887643 4556666543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=142.49 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=146.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
.++.++||||+|+||++++++|+++ |++|++..+.........+... .....+..+.+|+.|.+.+..++..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3478999999999999999999999 8888886543211111111110 1123567788999999888776532
Q ss_pred CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||.... ...+++....+++|+.++..+.+++ ++.+ ..++|++||.....
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------------- 145 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK------------- 145 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccC-------------
Confidence 378999999997532 2233445677899999976655554 4444 67999999864321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
+..+...|+.+|...+.+.+.++.+ .++++..++|+.+.++... ...+..........+. ..+..
T Consensus 146 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~---------~~~~~ 213 (246)
T PRK12938 146 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIPV---------RRLGS 213 (246)
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh--hcChHHHHHHHhcCCc---------cCCcC
Confidence 1123457999999999888777654 4789999999999876431 1122333322222211 13456
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+|++.++..++... ..++.+.+.++
T Consensus 214 ~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 214 PDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 899999999888653 24567777654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8e-15 Score=146.02 Aligned_cols=229 Identities=14% Similarity=0.130 Sum_probs=148.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--cccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--SSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++++||||||+|+||.++++.|+++ |++|+++.++... .....+... ....++.++++|+.+.+.+.+++..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 4589999999999999999999999 8887777654211 111111000 0123678899999999998877643
Q ss_pred ---CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||.... ....++....+++|+.++..+++++... ....++++++|.......
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------- 153 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------- 153 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------
Confidence 379999999997432 2223345667899999999999888643 112466665332221110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|++.|.+.+.++.+. +++++.++||.+.++...+... +....... .... ........+.+
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~--~~~~--~~~~~~~~~~~ 225 (257)
T PRK12744 154 ---PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHK--TAAA--LSPFSKTGLTD 225 (257)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhccc--cccc--ccccccCCCCC
Confidence 113569999999999999998774 6899999999997763211111 01000000 0000 11111224788
Q ss_pred HHHHHHHHHHHHhcCC--CCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRGV--IGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~--~~~~~ni~~~~ 260 (684)
.+|++.++..++.... .++++++.++.
T Consensus 226 ~~dva~~~~~l~~~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 226 IEDIVPFIRFLVTDGWWITGQTILINGGY 254 (257)
T ss_pred HHHHHHHHHHhhcccceeecceEeecCCc
Confidence 9999999999997532 46788888664
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=143.49 Aligned_cols=222 Identities=20% Similarity=0.177 Sum_probs=150.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
++++|+||||+|+||+++++.|+++ |++|+.+.|+... ....+.. .....++.++.+|+.+.+++.++++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAA-AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8898888775321 1111100 01234678899999999988877743
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|+|||+||..... ...++....+++|+.++.++++++... ....++|++||...+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------- 146 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-------------- 146 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC--------------
Confidence 3799999999975421 122345567889999999999888653 12358999998655321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
..+.+.|+.+|...+.+++.++.++ ++++++++|+.+-.+.... ...+..........+. ..+.+.+
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~ 216 (245)
T PRK12937 147 LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN-GKSAEQIDQLAGLAPL---------ERLGTPE 216 (245)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc-cCCHHHHHHHHhcCCC---------CCCCCHH
Confidence 2234679999999999998876553 7889999999887653110 1112223333222211 1235679
Q ss_pred HHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 236 DVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 236 D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
|+++++..++..+. .+..+++.++
T Consensus 217 d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 217 EIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHHHHcCccccCccccEEEeCCC
Confidence 99999998886532 4667777644
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=145.82 Aligned_cols=221 Identities=14% Similarity=0.107 Sum_probs=149.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++||||+|+||+++++.|+++ |++|++++|+.. ..+.+... ....++.++++|+.+.+.+..++..
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQE--KAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 899999999642 11111110 1123578899999999887766542
Q ss_pred -CCCCEEEEcCccCCcC-------------------CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcc
Q 035631 85 -EGIDTIMHFAAQTHVD-------------------NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDE 140 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~-------------------~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~ 140 (684)
.++|+|||+||..... ...++....+++|+.++..+++++ ++.+ ..++|++||..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~ 163 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN 163 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence 3799999999964321 112345567889999887666554 3333 57999999987
Q ss_pred cccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-----CChHHHHHHH
Q 035631 141 VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP-----EKLIPKFILL 212 (684)
Q Consensus 141 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~ 212 (684)
.+... .+...|+.+|...+.+++.++.++ ++++..++|+.+..+.... ..........
T Consensus 164 ~~~~~--------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 229 (278)
T PRK08277 164 AFTPL--------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANK 229 (278)
T ss_pred hcCCC--------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHH
Confidence 76422 233569999999999998887765 7899999999998874210 0000111111
Q ss_pred HHcCCceEEecCCCceEecccHHHHHHHHHHHHhc-C---CCCcEEEecCC
Q 035631 213 AMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR-G---VIGHVYNVGTK 259 (684)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~-~---~~~~~~ni~~~ 259 (684)
.....+ ...+...+|+|++++.++.. . ..+..+.+.+|
T Consensus 230 ~~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 230 ILAHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred HhccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 111111 12356689999999998875 2 24667777654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-14 Score=142.40 Aligned_cols=223 Identities=15% Similarity=0.131 Sum_probs=150.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|.||++++++|+++ |++|++++|+........+.. ...++.++.+|+.+.+++..+++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEA--LGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHH--cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 899999988532111111111 134678899999999998877643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ...+++...+++|+.++..+.+++.. .+...++|++||...+....
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 151 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI---------- 151 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC----------
Confidence 3699999999975432 12345567789999998888877643 22236999999987654221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|...+.+.+.++.+ +++++..++||.+-.+......-........... ++. ..+..
T Consensus 152 ----~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~ 218 (251)
T PRK12481 152 ----RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGT 218 (251)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcC
Confidence 1236999999999999877764 4899999999998655221000001111111111 111 13467
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+|+|+++..++... ..++.+.+.+|
T Consensus 219 peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 219 PDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 899999999998642 24566666544
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7e-15 Score=150.83 Aligned_cols=222 Identities=11% Similarity=0.033 Sum_probs=143.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++|+||||+|+||+++++.|+++ |++|++++|+.. ....+... ..++.++.+|+.|.+++..++.. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~--~~~~~~~~--l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPD--VAREALAG--IDGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH--hhhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999 899999999742 11111100 12478899999999988776632 4
Q ss_pred CCCEEEEcCccCCcC--CCCCChHHHHHHHHHHHHHHHH----HHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD--NSFGNSFEFTNNNIYGTHVLLE----ACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
++|+|||+||..... ...+..+..+++|+.++..+.+ .+++.+ ..++|++||........... ......+.
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~--~~~~~~~~ 175 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWD--DPHFTRGY 175 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCcc--ccCccCCC
Confidence 799999999975422 2234556788999999655555 444444 47999999975432111000 00111233
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-HHHHHcCCceEEecCCCceEecccHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKF-ILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.+...|+.+|.+.+.+.+.++.. .++++++++||++.++........... ...+.... .++ . ..+...+
T Consensus 176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~ 248 (315)
T PRK06196 176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPA 248 (315)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHh
Confidence 45568999999999998877654 479999999999998743211100000 00000000 000 0 0234679
Q ss_pred HHHHHHHHHHhcC
Q 035631 236 DVAEAFDVILHRG 248 (684)
Q Consensus 236 D~a~~i~~~~~~~ 248 (684)
|.|..++.++..+
T Consensus 249 ~~a~~~~~l~~~~ 261 (315)
T PRK06196 249 QGAATQVWAATSP 261 (315)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999888643
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=3e-14 Score=141.40 Aligned_cols=223 Identities=14% Similarity=0.136 Sum_probs=151.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|.||++++++|+++ |++|+++++.........+.. ....+..+++|+.|.+++..++..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTA--LGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 899999887542221222211 123577889999999888777643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ...++....+++|+.++.++++++... +.-.++|++||...+....
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 153 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI---------- 153 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC----------
Confidence 3799999999975322 223456678899999999988887532 2236899999987664321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
....|+.+|.+.|.+.+.++.+ +++++..++||++-.+......--......... .++. .-+..
T Consensus 154 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~ 220 (253)
T PRK08993 154 ----RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGL 220 (253)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcC
Confidence 1236999999999999888766 478999999999976532100000011111111 1111 12566
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+|+|.++..++... ..+..+.+.++
T Consensus 221 p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 221 PSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 799999999998753 24556655443
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.6e-14 Score=141.96 Aligned_cols=222 Identities=14% Similarity=0.083 Sum_probs=146.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-C-CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-P-SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
++++++||||+|+||+++++.|+++ |++|++..+... ....... . ......+..+.+|+.+.+.+..++..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRK-EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCH-HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 899988753221 1111110 0 01123466788999998765543321
Q ss_pred -------CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 -------EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 -------~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||....... .+.....+++|+.++..+++++... ....++|++||...+...
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------- 152 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL------- 152 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-------
Confidence 269999999996532211 1224567789999999999877653 123699999997664321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH-HHHHHHHcCCceEEecCCCce
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIP-KFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|+..+.+.+.++.++ ++++..+.||.+.++... .... .......... ...
T Consensus 153 -------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~--------~~~ 215 (252)
T PRK12747 153 -------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNA--ELLSDPMMKQYATTI--------SAF 215 (252)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhh--hcccCHHHHHHHHhc--------Ccc
Confidence 123579999999999998876653 899999999999887421 1100 0111111100 011
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|+|+++..++... ..++.+.+.+|
T Consensus 216 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 216 NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred cCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence 24678999999999988643 24567777655
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=144.05 Aligned_cols=199 Identities=17% Similarity=0.035 Sum_probs=139.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||||.||+++++.|+++ |++|++.+|+.. ....+... ...++++.+|+.|.+++..++..
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEA--LAKETAAE--LGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH--hccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 34579999999999999999999999 899999998642 11111110 11478889999999987665532
Q ss_pred CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||....... .+.....+++|+.++.++.+++. +.+ ..++|++||...+..
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------------ 143 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIP------------ 143 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCC------------
Confidence 368999999997543222 22345577899998888776664 444 679999999765422
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
......|+.+|...+.+.+.+..+ .++++++++|+.+-.+... +.. ......++.
T Consensus 144 --~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~--------------~~~------~~~~~~~~~ 201 (273)
T PRK07825 144 --VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA--------------GTG------GAKGFKNVE 201 (273)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc--------------ccc------cccCCCCCC
Confidence 123457999999888777665444 4899999999987543210 000 001124688
Q ss_pred HHHHHHHHHHHHhcCC
Q 035631 234 CADVAEAFDVILHRGV 249 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~ 249 (684)
.+|+|++++.++.++.
T Consensus 202 ~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 202 PEDVAAAIVGTVAKPR 217 (273)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.6e-14 Score=140.70 Aligned_cols=197 Identities=19% Similarity=0.154 Sum_probs=141.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC--CCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--GIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 89 (684)
|++|+||||+|+||++++++|+++ |++|++++|+.. ....+... ..++.++.+|+.|.+++.+++... .+|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQS--VLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHH--HHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 368999999999999999999999 899999999642 22222111 235788999999999998887542 4799
Q ss_pred EEEcCccCCc-C---CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCCh
Q 035631 90 IMHFAAQTHV-D---NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP 164 (684)
Q Consensus 90 Vih~a~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 164 (684)
+||+||.... + ...++....+++|+.++.++++++... ....++|++||....- +......
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~--------------~~~~~~~ 140 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL--------------ALPRAEA 140 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc--------------CCCCCch
Confidence 9999985422 1 122334568899999999999998753 1136899998854221 1112347
Q ss_pred hHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 165 YSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
|+.+|...+.+.+.++. .++++++++||++++++...... .. . ...+..+|+++.+
T Consensus 141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--------------~~---~----~~~~~~~~~a~~i 199 (240)
T PRK06101 141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT--------------FA---M----PMIITVEQASQEI 199 (240)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC--------------CC---C----CcccCHHHHHHHH
Confidence 99999999999887763 45899999999999987432110 00 0 0136789999999
Q ss_pred HHHHhcCC
Q 035631 242 DVILHRGV 249 (684)
Q Consensus 242 ~~~~~~~~ 249 (684)
...++...
T Consensus 200 ~~~i~~~~ 207 (240)
T PRK06101 200 RAQLARGK 207 (240)
T ss_pred HHHHhcCC
Confidence 99998643
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-15 Score=150.88 Aligned_cols=203 Identities=12% Similarity=0.000 Sum_probs=133.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999865 34778999999998888764 579
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcC-------CeEEEEecceeeecCCCCCCCCCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKN-------VLLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-------~~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
+|||+||....... +.........+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 155 (287)
T PRK06194 86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP---------- 155 (287)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----------
Confidence 99999997632111 22335556779999999999877743 322 369999998665311
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhhhHHhhhhh--hhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLV--ICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
. +...|+.+|...|.+......... ....+...+.+ +.............+..+.+++.+.++|
T Consensus 156 -------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~p-g~i~t~~~~~~~~~~~~~~~~~~~~~~~----- 221 (287)
T PRK06194 156 -------P-AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCP-YFVPTGIWQSERNRPADLANTAPPTRSQ----- 221 (287)
T ss_pred -------C-CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEe-CcccCccccccccCchhcccCccccchh-----
Confidence 1 346799999999988443322222 11222222221 2111111111112234566777788888
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcC
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
+|++|++.++.... .++..|+++.+.+.+.
T Consensus 222 ------------~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~ 251 (287)
T PRK06194 222 ------------LIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIR 251 (287)
T ss_pred ------------hHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHH
Confidence 88888887754221 1688888888887664
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-15 Score=147.28 Aligned_cols=200 Identities=14% Similarity=0.069 Sum_probs=132.5
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
+++|+||||||||+||.+|+++|+++|++| .++.+|+.|.+++.+++++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 344689999999999999999999999874 45778999999998888764
Q ss_pred CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 419 RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
.+|+|||+||....+.. ..........+++|+.++.++++.+. +.+. ++|++||...+.+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------- 150 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------- 150 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-------------
Confidence 68999999995521111 11344556789999999999999984 3444 69999998766311
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
. +...|+.+|...+.+..... .+..+...++..+.+.......... + .
T Consensus 151 ----~-~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~------------------~----~ 203 (249)
T PRK12825 151 ----P-GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA------------------R----E 203 (249)
T ss_pred ----C-CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh------------------H----H
Confidence 1 34689999999887743222 2344444555433322211100000 0 0
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
...... .-..+++.+|+++++.+++++. .+..|+++++..+
T Consensus 204 ~~~~~~-~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 204 AKDAET-PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred hhhccC-CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 000000 0013499999999999999764 2459999887654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=142.67 Aligned_cols=222 Identities=16% Similarity=0.113 Sum_probs=150.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++|+||||+|+||.+++++|+++ |++|++++|+..... ...+. ....++.++.+|+.+.+.+..++..
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIR--EAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 899999999742111 11111 1134688899999999888776543
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||++|.... ....+++...+++|+.++..+++++. +.+ ..++|++||...+...
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~--------- 151 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAA--------- 151 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC---------
Confidence 268999999997432 12234456678899999977766543 333 5799999997766432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|.+.+.+.+.++.++ ++++..++||.+-.+..... ...+..........+. ..
T Consensus 152 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~ 217 (253)
T PRK06172 152 -----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV---------GR 217 (253)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC---------CC
Confidence 123569999999999998887764 68899999998865532100 0001111111111111 12
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+...+|+++.+..++... ..|+.+.+.+|.
T Consensus 218 ~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 218 IGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred ccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 456899999999998653 356777777654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-14 Score=141.40 Aligned_cols=218 Identities=15% Similarity=0.075 Sum_probs=152.4
Q ss_pred EEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhccC-CCCEEEEc
Q 035631 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVSE-GIDTIMHF 93 (684)
Q Consensus 16 lItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~ 93 (684)
|||||+|+||++++++|+++ |++|++++|+.. ....+.. .....+++++.+|+.|.+.+..++... ++|++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRD--RLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 69999999999999999999 899999999642 1111110 011346788999999999998888543 57999999
Q ss_pred CccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 94 AAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 94 a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
+|..... ...++....+++|+.++.++.++....+ ..++|++||...|... .+...|+.+|
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~--------------~~~~~Y~~sK 141 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPS--------------ASGVLQGAIN 141 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCC--------------CcchHHHHHH
Confidence 9975432 1234566788999999999999665544 6899999998776421 2345799999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 170 AGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 170 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
...+.+++.++.+. +++++.++|+.+-.+... .......+........+ . ..+...+|+|+++..++.
T Consensus 142 ~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dva~~~~~l~~ 212 (230)
T PRK07041 142 AALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A-------RRVGQPEDVANAILFLAA 212 (230)
T ss_pred HHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhc
Confidence 99999998887664 578888999987554210 00001112222222111 1 123567999999999997
Q ss_pred cC-CCCcEEEecCCCc
Q 035631 247 RG-VIGHVYNVGTKKE 261 (684)
Q Consensus 247 ~~-~~~~~~ni~~~~~ 261 (684)
.. ..++.|++.++.+
T Consensus 213 ~~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 213 NGFTTGSTVLVDGGHA 228 (230)
T ss_pred CCCcCCcEEEeCCCee
Confidence 65 3478899987754
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-15 Score=147.68 Aligned_cols=199 Identities=11% Similarity=-0.058 Sum_probs=124.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. .+
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL 85 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999976 23457999999888877643 47
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+|||+|+... .....+...+++|+.++.++++++.+. +.++|++||........ .+..+
T Consensus 86 d~vi~~ag~~~-----~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~~-- 148 (248)
T PRK07806 86 DALVLNASGGM-----ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----------VKTMP-- 148 (248)
T ss_pred cEEEECCCCCC-----CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----------ccCCc--
Confidence 99999998541 112345678899999999999999864 34799999864321000 01111
Q ss_pred CCCChhhhhhHhHhhhhhHHhhh-----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEIFV-----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
..+.|+.+|+.+|.+....... ..+...++..+.+. +...+..... + ..+. .. .
T Consensus 149 -~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~-----~~~~~~~~~~-~---------~~~~----~~-~ 207 (248)
T PRK07806 149 -EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGT-----VTATLLNRLN-P---------GAIE----AR-R 207 (248)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCc-----hhhhhhccCC-H---------HHHH----HH-H
Confidence 2468999999999874433222 22222221111100 0000000000 0 0000 00 0
Q ss_pred cccCCCccchhhHHHHHHHHHhcC-ccc-eeEecCCCc
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN-CRG-AWNFTNPGV 608 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~-~~g-~~ni~~~~~ 608 (684)
.....+++++|++++++.++++. ..| +|++++++.
T Consensus 208 -~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 208 -EAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred -hhhcccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence 00114599999999999999866 344 899988754
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.6e-15 Score=149.31 Aligned_cols=187 Identities=13% Similarity=0.062 Sum_probs=128.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++|+||||+|+||+++++.|+++ |++|++++|+..... ...+........+.++.+|+.|.+++..++..
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 445689999999999999999999999 899999998642211 11111111124578899999999988776532
Q ss_pred ---CCCCEEEEcCccCCcC--CCCCChHHHHHHHHHH----HHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD--NSFGNSFEFTNNNIYG----THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+..+..+++|+.+ +..+++.+++.+ ..++|++||...+....... .....
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~-~~~~~ 168 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHF-DDLQW 168 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCc-cccCc
Confidence 3699999999975432 2234556788999999 666777776654 57999999986543111111 11111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEE--EEeeCceeCCC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTI--TTRGNNVYGPN 199 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~--ilR~~~v~G~~ 199 (684)
..+..+...|+.+|.+.+.+.+.++.+. +++++ .+.||.|..+.
T Consensus 169 ~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 169 ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 2234456789999999999998887654 55554 45799887653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.7e-14 Score=141.29 Aligned_cols=165 Identities=16% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----CC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----EG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 86 (684)
||+||||||+|+||+++++.|+++ |++|++++|+.. ....+. ..++.++.+|+.+.+.+.+++.. .+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAE--DVEALA----AAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHH----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999 899999998642 111111 12577889999999888776633 37
Q ss_pred CCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|+|||+||...... ..++....+++|+.++.++++++... ....++|++||...+... .
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------------~ 138 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT--------------P 138 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC--------------C
Confidence 899999999754322 22345567899999999888887431 113689999986543211 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGP 198 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 198 (684)
....|+.+|...+.+.+.++.+ +++++++++||.+..+
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 2357999999999988777654 5899999999999765
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-14 Score=140.55 Aligned_cols=224 Identities=13% Similarity=0.099 Sum_probs=149.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-C-CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-S-RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+.... ...+.. . ....++..+.+|+.|.+++.+++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDG-LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 89999999864211 111100 0 1123577889999999887776532
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...++....+++|+.++..+++++. +.+ ..++|++||...+.....
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~------- 154 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG------- 154 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC-------
Confidence 3589999999975432 1223455678899999977766653 333 479999999764422111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|+..+.+.+.++.+ +++++.+++||++.++........ .......... ++ .-+
T Consensus 155 -----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~-~~~~~~~~~~--p~-------~r~ 219 (254)
T PRK06114 155 -----LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMV-HQTKLFEEQT--PM-------QRM 219 (254)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccch-HHHHHHHhcC--CC-------CCC
Confidence 11356999999999998888764 479999999999987743211111 1111111111 11 124
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+|++.+++.++... ..++++.+.+|
T Consensus 220 ~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 220 AKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred cCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 56899999999988643 24667777654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.7e-15 Score=147.74 Aligned_cols=202 Identities=11% Similarity=0.045 Sum_probs=129.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+.+.++++.. .+|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999866 34678999999998887753 379
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhh----hHHHHHHH-HHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMG----TLTLADVC-KEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~----~~~ll~~~-~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|||+|+....... +...+.....+++|+.+ +..+++++ +..+. ++|++||...+.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~----------------- 149 (262)
T PRK13394 87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE----------------- 149 (262)
T ss_pred EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------------
Confidence 99999996521111 22234456778899999 66677777 54444 699999864331
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccc-c-----ccceecCCCCCchHH
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLR-L-----RMPISSDLSNPRNFV 563 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~g~~~~~~~~~ 563 (684)
... +.+.|+.+|...+.+..... .+..+...++..+.++.....+....... . ...+++.+...++|
T Consensus 150 ~~~-~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (262)
T PRK13394 150 ASP-LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVF- 227 (262)
T ss_pred CCC-CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCC-
Confidence 011 44689999999887733222 12334445554444333222211111000 0 00111222233445
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
+|++|++++++.++... . +..|++.++.
T Consensus 228 ----------------~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 228 ----------------TTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred ----------------CCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 99999999999998754 2 3478887764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=141.49 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=148.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+|+++||||+|.||+++++.|+++ |++|++++|+.. ....+... .....+.++++|+.|.+.+..++..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKE--KLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 368999999999999999999999 899999998742 11111110 1124678899999999888776643
Q ss_pred CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
..+|+|||++|.... ..+.+++...+++|+.++.++++++.. .+...++|++||...+...
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------- 145 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------- 145 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC-----------
Confidence 368999999985432 222233567889999999999998843 2223689999986443211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCCceEEecCCCceEec
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGPNQFPEK-LIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.....|+.+|...+.+.+.++.+ +++++..++||.+.+....... .-+...+.+.+..++ ..+
T Consensus 146 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 213 (252)
T PRK07677 146 ---PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRL 213 (252)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCC
Confidence 12246999999999998887655 3788999999999854211000 011222222222111 134
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+|+++++..++... ..++.+.+.++.
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred CCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence 56799999998887643 356667776553
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-13 Score=139.51 Aligned_cols=222 Identities=20% Similarity=0.228 Sum_probs=163.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+||||||||++|++++++|+++ +++|++..|++.. ...+. .++++..+|+.+...+...+ .+.|.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~--~~~~~-----~~v~~~~~d~~~~~~l~~a~--~G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEA--AAALA-----GGVEVVLGDLRDPKSLVAGA--KGVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHH--HHhhc-----CCcEEEEeccCCHhHHHHHh--ccccEEEE
Confidence 57999999999999999999999 9999999997532 11111 68999999999999999998 89999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+.+... ... ...........+..+.+. . .+++++++|....-. .....|..+|..+
T Consensus 70 i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~----------------~~~~~~~~~~~~~ 125 (275)
T COG0702 70 ISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADA----------------ASPSALARAKAAV 125 (275)
T ss_pred Eecccc-ccc-----chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCC----------------CCccHHHHHHHHH
Confidence 888543 111 122333433444444444 2 378899988754311 2235699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~ 251 (684)
|..+.. .+++++++|+..+|..... .+ .......+.+......+ ..+++..+|++.++..++..+ ..+
T Consensus 126 e~~l~~----sg~~~t~lr~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~ 194 (275)
T COG0702 126 EAALRS----SGIPYTTLRRAAFYLGAGA---AF--IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAG 194 (275)
T ss_pred HHHHHh----cCCCeEEEecCeeeeccch---hH--HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccC
Confidence 999965 4899999997777765431 11 22233334433333333 679999999999999999876 467
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCC
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~ 280 (684)
++|.+++++..+..++.+.+....|.+..
T Consensus 195 ~~~~l~g~~~~~~~~~~~~l~~~~gr~~~ 223 (275)
T COG0702 195 RTYELAGPEALTLAELASGLDYTIGRPVG 223 (275)
T ss_pred cEEEccCCceecHHHHHHHHHHHhCCcce
Confidence 89999999999999999999999997653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.3e-14 Score=140.18 Aligned_cols=224 Identities=16% Similarity=0.079 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++++||||+|+||+++++.|+++ |++|++++|+..... ...+. ....++.++.+|+.+.+++..++..
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELC--GRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHH--HhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999998642111 01111 1124577889999999988777643
Q ss_pred -CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
..+|+|||+||....... .+.....+++|+.++.++++++... ....++|++||......
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------ 147 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV------------ 147 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc------------
Confidence 378999999997543221 2233446889999999988886531 12578999998543100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC------CChHHHHHHHHHcCCceEEecCCCc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP------EKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
+......|+.+|...|.+++.++.++ +++++.++||.+.++.... ..........+....+.
T Consensus 148 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------- 218 (263)
T PRK08226 148 -ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-------- 218 (263)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC--------
Confidence 11123569999999999998887664 7899999999998763210 00111222233222211
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|+|+++..++... ..++.+.+.++
T Consensus 219 -~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 219 -RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred -CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 13457899999998887532 24556666554
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-14 Score=140.44 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=148.3
Q ss_pred CCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCccccc-------cc--CCC--CCCCCCceEEEecCCCHHH
Q 035631 11 KPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSSL-------KN--LHP--SRASPNFKFLKGDITCADL 77 (684)
Q Consensus 11 ~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-------~~--l~~--~~~~~~~~~~~~Dl~d~~~ 77 (684)
++++||||||+| .||.+++++|+++ |++|++++|++.+... .. +.. ......++++.+|+.+.++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 457899999996 6999999999999 8999999986321100 00 000 0112358899999999988
Q ss_pred HHHhhcc-----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCC
Q 035631 78 MNYLLVS-----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGET 145 (684)
Q Consensus 78 ~~~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~ 145 (684)
+..++.. ..+|+|||+||...... .++++...+++|+.++..+++++... ....++|++||...++..
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 7666532 36899999999754322 22334567899999999999888542 124699999997665422
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEe
Q 035631 146 DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 146 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (684)
.....|+.+|++.|.+++.++.+ .+++++.++|+.+..+... ...........+
T Consensus 162 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~---- 218 (256)
T PRK12748 162 --------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFP---- 218 (256)
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCC----
Confidence 12356999999999998887655 4799999999987655321 111111111110
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
. ..+...+|+++++..++... ..+.++++.++
T Consensus 219 ~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 219 Q-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred C-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 0 12345699999998888642 34678888655
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=142.13 Aligned_cols=225 Identities=14% Similarity=0.101 Sum_probs=146.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+..... ...+. ....++..+.+|+.+.+++..++..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIAEAVSETVDKIK--SNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHH--hcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999621111 11111 1123578899999999887766532
Q ss_pred -CCCCEEEEcCccCCcC-C----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD-N----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~-~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|++||+||..... . ..+.....+++|+.++..+++++. +.+ .++|++||...+...
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~--------- 148 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAAD--------- 148 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCC---------
Confidence 3589999999975321 1 112344567889988876666654 333 699999997654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|...+.+++.++.+. ++++..+.||.|..+.... ...-..+............ + ..
T Consensus 149 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~ 218 (272)
T PRK08589 149 -----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT---P--LG 218 (272)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC---C--CC
Confidence 123569999999999998887654 7999999999987653210 0000000011110000000 0 11
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+...+|+++++..++... ..++.+.+.++
T Consensus 219 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 219 RLGKPEEVAKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence 2467899999999988643 24567777655
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-14 Score=142.61 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|.||++++++|+++ |++|++++|+.. ....+... ...++.++.+|+.+.+++.+++..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDAD--NGAAVAAS-LGERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 899999999742 11111111 124578899999999988777643
Q ss_pred CCCCEEEEcCccCCc---CCCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV---DNSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
..+|+|||+||.... ...+++....+++|+.++..+++++... ....++|++||...+-..
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------- 144 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-------------- 144 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC--------------
Confidence 368999999996432 2233455677899999999888876531 124689999996543211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.+ +++++..++||.+..+.... .... ......... . .+ ...+...
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~~~~~~~~~--~----~p--~~r~~~p 215 (261)
T PRK08265 145 TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-AKADRVAAP--F----HL--LGRVGDP 215 (261)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-hHHHHhhcc--c----CC--CCCccCH
Confidence 12346999999999999888765 37899999999876652100 0000 000011000 0 00 1124568
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+|+|+++..++... ..++.+.+.++
T Consensus 216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 216 EEVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred HHHHHHHHHHcCccccCccCcEEEECCC
Confidence 99999999998753 25667777765
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.3e-14 Score=139.78 Aligned_cols=221 Identities=18% Similarity=0.135 Sum_probs=150.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++++||||+|.||.+++++|+++ |++|++++|+.. ....+... ....++..+++|+.+.+++..++..
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQE--LVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34588999999999999999999999 899999988642 11111100 1123578899999999998877643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccc-ccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEV-YGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~v-yg~~~~~~~~~~ 153 (684)
..+|+|||+||..... ...+.....+++|+.++..+.+++.. .+ ..+||++||... ++
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------- 152 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELG---------- 152 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCC----------
Confidence 3589999999975432 22334556778999988877777643 33 579999998533 22
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh------HHHHHHHHHcCCceEEecC
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKL------IPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 224 (684)
..+...|+.+|...+.+.+.++++. +++++.++||.+..+....... ...+...+....+
T Consensus 153 -----~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 221 (265)
T PRK07097 153 -----RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------ 221 (265)
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------
Confidence 1224579999999999998887764 8999999999998874311000 0001111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+...+|+|..+..++... ..++.+.+.++
T Consensus 222 ---~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 256 (265)
T PRK07097 222 ---AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG 256 (265)
T ss_pred ---ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 113466899999999998753 25566676655
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.7e-14 Score=141.50 Aligned_cols=221 Identities=13% Similarity=0.086 Sum_probs=149.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++|+||||+|+||+++++.|+++ |++|++++|+.. ..+.+... ....++.++.+|+.+.+++.+++..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVE--RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999642 22211111 1123578899999999888777632
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cC-------CCcEEEEEeCcccccCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TG-------QVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~-------~~~~~i~~SS~~vyg~~~~ 147 (684)
.++|+|||+++...... ..+++...+++|+.++.++++++.. .. ...++|++||...+..
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--- 159 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV--- 159 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC---
Confidence 36899999999654321 2234556789999999988887752 11 1258999999765432
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
..+...|+.+|.+.+.+++.++.+ .++++++++||+++++...... ........... ++.
T Consensus 160 -----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~--~~~--- 222 (258)
T PRK06949 160 -----------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW-ETEQGQKLVSM--LPR--- 222 (258)
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc-ChHHHHHHHhc--CCC---
Confidence 123457999999999999887665 4799999999999987542111 11111111111 110
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGT 258 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~ 258 (684)
..+...+|+++++..++... ..+..+.+.+
T Consensus 223 ----~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg 255 (258)
T PRK06949 223 ----KRVGKPEDLDGLLLLLAADESQFINGAIISADD 255 (258)
T ss_pred ----CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence 13455799999999988643 2455555443
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=143.53 Aligned_cols=199 Identities=10% Similarity=0.034 Sum_probs=124.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++||||||+|+||++++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRL 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999876 24667999999998888764 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|+|||+||...... .....+.....+++|+.++.++++++... +..++.+||. .+..+
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 149 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI-----------------HAERP 149 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh-----------------hhcCC
Confidence 99999999642111 11223456788999999999999999753 2234444332 22233
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhhh----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIFV----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK 571 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 571 (684)
.. |.+.|+.+|+.+|.+....... ..+...++..+.++..... ....+...... +.
T Consensus 150 ~~-~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~------------------~~~~~~~~~~~-~~ 209 (249)
T PRK09135 150 LK-GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS------------------FDEEARQAILA-RT 209 (249)
T ss_pred CC-CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc------------------CCHHHHHHHHh-cC
Confidence 44 7789999999999884332221 2233333332221110000 00011111111 11
Q ss_pred ccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCCccc
Q 035631 572 VVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVIS 610 (684)
Q Consensus 572 ~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s 610 (684)
. ...+.+++|+|+++..++... .+.+||++++..++
T Consensus 210 ~---~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 210 P---LKRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred C---cCCCcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 0 012256899999997766533 34489999987654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.1e-14 Score=138.84 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=150.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|.||+++++.|+++ |++|++++|+.. ..+.+... ....++..+.+|+.|.+.+.+++..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLD--ALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999998642 22111110 1124577889999999988776642
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||...... ..+.....+++|+.++..+++++.. .+.-.++|++||....-..
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 153 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------- 153 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC---------
Confidence 37999999999754321 2233455678999999999888753 2212579999886432100
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.......|+.+|...+.+.+.++.+. ++++..++||.+-.+... .. ...........+ . ..+
T Consensus 154 ---~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~--~~-~~~~~~~~~~~~--~-------~r~ 218 (253)
T PRK05867 154 ---VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE--PY-TEYQPLWEPKIP--L-------GRL 218 (253)
T ss_pred ---CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc--cc-hHHHHHHHhcCC--C-------CCC
Confidence 01122469999999999998887653 899999999999765321 11 111112221111 1 134
Q ss_pred ccHHHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
...+|+|++++.++.... .++.+.+.+|.
T Consensus 219 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 219 GRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred cCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 678999999999986532 46777776653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.2e-14 Score=129.90 Aligned_cols=210 Identities=18% Similarity=0.081 Sum_probs=146.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc----c-C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV----S-E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~-~ 85 (684)
.+|.|+|||||+.||.++++.|.++ |++|++..|+. +.++.+........+..+..|++|.+++..++. . .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA--GAKVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 4578999999999999999999999 89999999974 444444433322567889999999988554432 2 3
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|++||.||.... ....+++..++++|+.|..+..++.. +.+ ..++|.+||.+.--
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~-------------- 145 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY-------------- 145 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccc--------------
Confidence 69999999997643 22334566788999999998888764 333 46999999965311
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
+....+.|+.+|+....+......+ .+++++.+-||.|-......-++ ..-..+..+ +. ....++..
T Consensus 146 ~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~-~g~~~~~~~---~y------~~~~~l~p 215 (246)
T COG4221 146 PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF-EGDDERADK---VY------KGGTALTP 215 (246)
T ss_pred cCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC-CchhhhHHH---Hh------ccCCCCCH
Confidence 1222356999999999998777665 37899999999874431100000 000000000 00 11256889
Q ss_pred HHHHHHHHHHHhcCC
Q 035631 235 ADVAEAFDVILHRGV 249 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~ 249 (684)
+|+|+++..++.+|.
T Consensus 216 ~dIA~~V~~~~~~P~ 230 (246)
T COG4221 216 EDIAEAVLFAATQPQ 230 (246)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999875
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-14 Score=138.77 Aligned_cols=219 Identities=16% Similarity=0.186 Sum_probs=145.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
+++|||||+|+||++++++|+++ |++|+++.|... ........ .....++.++.+|+.+.+.+..++.. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNE-ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999 899999888321 11111100 01124688899999999887766532 3
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|+|||++|..... ...+++...++.|+.++..+++. +++.+ .+++|++||......
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~------------- 143 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKG------------- 143 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC-------------
Confidence 689999999965421 22234456678999987775544 44444 679999998543211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
......|+.+|...+.+++.++.+ .+++++.++|+.+.++... ...+.+........+.. .+...
T Consensus 144 -~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~~---------~~~~~ 211 (242)
T TIGR01829 144 -QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM--AMREDVLNSIVAQIPVG---------RLGRP 211 (242)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc--ccchHHHHHHHhcCCCC---------CCcCH
Confidence 112356999999888888776544 4899999999999877432 12223333332222211 23456
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+|+++++..++..+ ..++.+.+.++.
T Consensus 212 ~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 212 EEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred HHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 89999998777653 346788887663
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=142.58 Aligned_cols=223 Identities=16% Similarity=0.173 Sum_probs=147.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++++||||||+|+||.+++++|+++ |++|++++|+... ...+.. .....++.++.+|+.+.+++..+++.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEK--VDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD 82 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 8999999986421 111110 01123567889999999888776643
Q ss_pred --CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+|+.... ....++....+++|+.++.++++++... ....++|++||...+..
T Consensus 83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~------------ 150 (264)
T PRK07576 83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP------------ 150 (264)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC------------
Confidence 268999999985322 1222344567889999999999887642 11269999999654321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH-HHHHHHHcCCceEEecCCCceEecc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP-KFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
......|+.+|...|.+++..+.+ .+++++.++|+.+.+..... ...+ ........ ...+ ...+.
T Consensus 151 --~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~-~~~~~~~~~~~~~-~~~~-------~~~~~ 219 (264)
T PRK07576 151 --MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA-RLAPSPELQAAVA-QSVP-------LKRNG 219 (264)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh-hcccCHHHHHHHH-hcCC-------CCCCC
Confidence 122356999999999999887655 37889999999887532100 0111 00111000 0111 12356
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+|+|+++..++..+ ..+..+.+.++
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 220 TKQDIANAALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred CHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence 7899999999999753 24556666654
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-14 Score=141.36 Aligned_cols=223 Identities=13% Similarity=0.059 Sum_probs=150.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++|+||||+|+||+++++.|+++ |++|++++|+..... ...+.......++.++.+|+.|.+++..++..
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999642111 01111101234578899999999888777642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|++||+||..... ...++....+++|+.++..+++++.. .+ ..++|++||...+...
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--------- 152 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKII--------- 152 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCC---------
Confidence 3799999999964321 22234556788999999888888643 33 4799999997554221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH------HHHHHHHHcCCceEEecCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI------PKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 225 (684)
.+...|+.+|++.+.+.+.++.+. ++++..++||.+-.+... .++ ...........+ .
T Consensus 153 -----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~--~---- 219 (260)
T PRK07063 153 -----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTE--DWWNAQPDPAAARAETLALQP--M---- 219 (260)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhh--hhhhccCChHHHHHHHHhcCC--C----
Confidence 123469999999999998887664 789999999988654211 000 001111111111 0
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.-+...+|+|.+++.++... ..++.+.+.+|.
T Consensus 220 ---~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 220 ---KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred ---CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence 12456899999999998653 245667776553
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=142.03 Aligned_cols=218 Identities=17% Similarity=0.128 Sum_probs=144.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++|+||||+|+||.+++++|+++ |++|++++|+... ...+... -...++++|+.+.+.+..++..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEA--GKAAADE---VGGLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHH---cCCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999986421 1111100 0125788999999988877643
Q ss_pred CCCCEEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCc-ccccCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTD-EVYGETDMESDIGN 153 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~-~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+.....+++|+.++..+++.+. +.+ ..++|++||. .++|..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~-------- 148 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSA-------- 148 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCC--------
Confidence 3689999999975321 1122355678899999887776653 333 4689999885 344421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCceEEecCCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|+..+.+.+.++.+ .+++++++|||++.++..... .......+.. ..++ .
T Consensus 149 ------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~---~~~~---~---- 212 (255)
T PRK06057 149 ------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL---VHVP---M---- 212 (255)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH---hcCC---C----
Confidence 12346999998887777655433 379999999999988743110 0011111111 0111 1
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+..++|+++++..++... ..+..+.+.++
T Consensus 213 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 213 GRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 14688999999998888643 23566666544
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-13 Score=119.19 Aligned_cols=209 Identities=21% Similarity=0.198 Sum_probs=148.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||.|+||||.+|+.++++.+++ ||+|+++.|++.. ....+.+..++.|+.|.+++...+ .+.|+||.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K--------~~~~~~~~i~q~Difd~~~~a~~l--~g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASK--------LAARQGVTILQKDIFDLTSLASDL--AGHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHh--------ccccccceeecccccChhhhHhhh--cCCceEEE
Confidence 68999999999999999999999 9999999998631 111257889999999999998888 89999998
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
.-+.... +.. .........|++..+.++ +.|++.++.++-.--.... .-.+.|..|...|...+..+
T Consensus 69 A~~~~~~-----~~~---~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~----rLvD~p~fP~ey~~~A~~~a 135 (211)
T COG2910 69 AFGAGAS-----DND---ELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGT----RLVDTPDFPAEYKPEALAQA 135 (211)
T ss_pred eccCCCC-----Chh---HHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCc----eeecCCCCchhHHHHHHHHH
Confidence 7765421 111 122344678888888887 8999998875443211111 12456667777788888877
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-CC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-IG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~ 251 (684)
|. +..+..+.+++||.+-|+..+-|++...++ ...+..+..-..| -++|...|.|-+++..++++. .+
T Consensus 136 e~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~y-------rlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 136 EF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNY-------RLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred HH-HHHHhhccCcceEEeCcHHhcCCccccCce-------EeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccc
Confidence 73 334445557999999999999997654443 1122223332223 377889999999999998865 44
Q ss_pred cEEEec
Q 035631 252 HVYNVG 257 (684)
Q Consensus 252 ~~~ni~ 257 (684)
+.|-+.
T Consensus 205 qRftv~ 210 (211)
T COG2910 205 QRFTVA 210 (211)
T ss_pred eeeeec
Confidence 555443
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.3e-14 Score=141.18 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=144.6
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC----CCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH----PSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+|+||||+|+||+++++.|+++ |++|++++|+.. .....+. .......+..+.+|+.|.+.+.+++..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDA-AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcc-hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999 899999998621 1111111 111112345678999999988776532
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHH----HHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIY----GTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~----~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||...... ..++....+++|+. ++++++.++++.+ .++||++||...+....
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~---------- 146 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEP---------- 146 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCC----------
Confidence 36899999999764321 12234456788887 7788888887765 68999999987764322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHH-----HHHHHHHcCCceEEecCCC
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY-----GLPTITTRGNNVYGPNQFPEKLIP-----KFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 226 (684)
....|+.+|...+.+.+.++.+. +++++.++|+.+.++... .... ........+.+
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~-------- 212 (251)
T PRK07069 147 ----DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD--PIFQRLGEEEATRKLARGVP-------- 212 (251)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh--HHhhhccchhHHHHHhccCC--------
Confidence 22469999999999998876552 477899999999887431 1111 11111111111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+.+.+|++++++.++..+ ..+..+.+.++
T Consensus 213 -~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 213 -LGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred -CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 123467899999999887643 23455555433
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.2e-14 Score=138.94 Aligned_cols=201 Identities=14% Similarity=0.087 Sum_probs=141.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
++++++||||+|+||++++++|+++ |++|++++|+...... ..+........+.++.+|+.+.+++..++..
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE 78 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 7999999997421110 0111111134678899999999887766532
Q ss_pred -CCCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||....... .+.....+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------- 147 (248)
T PRK08251 79 LGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL---------- 147 (248)
T ss_pred cCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC----------
Confidence 369999999997543221 23344678899999998888774 334 6799999996543211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|...+.+.+.+..+ .+++++.++|+++.++.... .+. ....+
T Consensus 148 ---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------------~~~----------~~~~~ 202 (248)
T PRK08251 148 ---PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------------AKS----------TPFMV 202 (248)
T ss_pred ---CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc------------ccc----------CCccC
Confidence 112357999999999988877655 36889999999987653210 000 01246
Q ss_pred cHHHHHHHHHHHHhcCC
Q 035631 233 YCADVAEAFDVILHRGV 249 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~ 249 (684)
..+|.|+++..+++...
T Consensus 203 ~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 203 DTETGVKALVKAIEKEP 219 (248)
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 78999999999997543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=139.38 Aligned_cols=199 Identities=16% Similarity=0.081 Sum_probs=140.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc--CCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS--EGI 87 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~ 87 (684)
||+|+||||+|+||++++++|+++ |++|++++|+...... ..+. .....+++++++|+.+.+++.+++.. .++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLR-ARGAVAVSTHELDILDTASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence 468999999999999999999999 8999999997532110 0111 11234688999999999988777643 257
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
|+|||++|..... ...++....+++|+.++.++++++... ....++|++||...... ..
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------~~ 143 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG--------------RA 143 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC--------------CC
Confidence 9999999865432 222334467899999999999887542 22579999998643211 11
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.++.+ .++++++++|+.+.++.... .. .+. ......+|+
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~~--~~~-----~~~~~~~~~ 202 (243)
T PRK07102 144 SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------LK--LPG-----PLTAQPEEV 202 (243)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------cC--CCc-----cccCCHHHH
Confidence 2346999999999998877543 48999999999998762210 00 000 124678999
Q ss_pred HHHHHHHHhcC
Q 035631 238 AEAFDVILHRG 248 (684)
Q Consensus 238 a~~i~~~~~~~ 248 (684)
++++..++.++
T Consensus 203 a~~i~~~~~~~ 213 (243)
T PRK07102 203 AKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHhCC
Confidence 99999999854
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-14 Score=142.20 Aligned_cols=164 Identities=15% Similarity=0.124 Sum_probs=120.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-------
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS------- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 84 (684)
||+||||||||+||++++++|+++ |++|++++|+.... +. .....++.++++|+.+.+++..++..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~----~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPS----LA-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchh----hh-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 368999999999999999999999 89999999864311 11 11234688899999999988775432
Q ss_pred --CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|++||+|+..... ...+.....+++|+.++..+.+.+. +.+ .+++|++||...+..
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--------- 143 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNA--------- 143 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCC---------
Confidence 2689999999975421 1123345677899999766665554 333 579999999766532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh--cCCCEEEEeeCceeC
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS--YGLPTITTRGNNVYG 197 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G 197 (684)
..+...|+.+|...|.+++.++.+ .++++..++|+.+-.
T Consensus 144 -----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 144 -----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 223467999999999999988754 478899999998744
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.8e-14 Score=140.34 Aligned_cols=222 Identities=15% Similarity=0.099 Sum_probs=148.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+.. ....+... ...++.++++|+.+.+.+..++..
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAE--KLASLRQR-FGDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 899999999642 22221111 123578899999999887766532
Q ss_pred CCCCEEEEcCccCCcC-----CCCCC----hHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD-----NSFGN----SFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~-----~~~~~----~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|++||+||..... ...+. +...+++|+.++..+++++... ....++|++||...+...
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 150 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-------- 150 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC--------
Confidence 2699999999974321 11111 3456789999988888777532 112689999997765322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCC---------hHHHHHHHHHcCCceEEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEK---------LIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~ 222 (684)
.+...|+.+|...+.+++.++.+. ++++..+.||.+..+...... ..+......... .+
T Consensus 151 ------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-- 220 (263)
T PRK06200 151 ------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--TP-- 220 (263)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--CC--
Confidence 123469999999999998887764 488899999998655221000 001111111111 11
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC----CCCcEEEecCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTK 259 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~ 259 (684)
..-+...+|+++++..++... ..++.+.+.+|
T Consensus 221 -----~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 221 -----LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred -----CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 123567899999999988644 24567777654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-14 Score=139.22 Aligned_cols=223 Identities=12% Similarity=0.032 Sum_probs=142.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|.||+++++.|+++ |++|+.+.|+.. .....+. .......+.++.+|+.|.+++.+++..
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNV-EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 899988866432 1111110 001124678899999999988776643
Q ss_pred ---CCCCEEEEcCccCCc----------CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV----------DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~ 147 (684)
.++|++||+||.... ....+.....+++|+.+...+.+.+ ++.+ ..++|++||...+-.
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--- 158 (260)
T PRK08416 83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY--- 158 (260)
T ss_pred HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC---
Confidence 368999999985421 1111233456677777666555444 3333 469999999643211
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
......|+.+|+..+.+.+.++.++ ++++..+.||.+-.+......-............+.
T Consensus 159 -----------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----- 222 (260)
T PRK08416 159 -----------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL----- 222 (260)
T ss_pred -----------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC-----
Confidence 1122469999999999998887764 799999999987544210000001111111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|++.+++.++... ..++.+.+.++
T Consensus 223 ----~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 223 ----NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred ----CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 13567899999999988653 34667777654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.6e-14 Score=142.96 Aligned_cols=213 Identities=15% Similarity=0.074 Sum_probs=144.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++|+||||+|+||+++++.|+++ |++|++++|+.. ....+... ....++.++.+|+.|.+++..++..
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~--~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEE--GLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 899999999642 11111110 1134678899999999988776532
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHH----HHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLL----EACKLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll----~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|++||+||..... ...++....+++|+.+..++. ..+++.+ ..+||++||...|...
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~---------- 151 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI---------- 151 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC----------
Confidence 3799999999965322 122334456788877666544 4444544 5799999998776432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|...+.+.+.++.+ .++.+++++|+.+-.+.. .... ....... .....
T Consensus 152 ----~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~------~~~~-~~~~~~~-------~~~~~ 213 (334)
T PRK07109 152 ----PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF------DWAR-SRLPVEP-------QPVPP 213 (334)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh------hhhh-hhccccc-------cCCCC
Confidence 12357999999999888776544 258899999998876521 1110 0000000 01124
Q ss_pred cccHHHHHHHHHHHHhcCCCCcEEEecC
Q 035631 231 YLYCADVAEAFDVILHRGVIGHVYNVGT 258 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~~~~~~ni~~ 258 (684)
+...+|+|++++.++.++ ...+.++.
T Consensus 214 ~~~pe~vA~~i~~~~~~~--~~~~~vg~ 239 (334)
T PRK07109 214 IYQPEVVADAILYAAEHP--RRELWVGG 239 (334)
T ss_pred CCCHHHHHHHHHHHHhCC--CcEEEeCc
Confidence 568899999999999865 34566664
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=140.34 Aligned_cols=200 Identities=21% Similarity=0.208 Sum_probs=140.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++|+||||+|+||.++++.|+++ |++|++++|+.. ....+... .....+.++.+|+.|.+++.+++..
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~--~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR--GATVVAVARRED--LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3488999999999999999999999 899999999742 11111110 0123467889999999988777641
Q ss_pred -CCCCEEEEcCccCCcCCC------CCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNS------FGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||....... +++....+++|+.++.++++++. +.+ ..++|++||.++++..
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 185 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA-------- 185 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC--------
Confidence 379999999997543221 12334678999999888877653 444 5799999997665321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
......|+.+|++.+.+.+.++.+ ++++++.++||.+-.+.... ... . .+ ..
T Consensus 186 -----~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~----------~~~-----~--~~---~~ 240 (293)
T PRK05866 186 -----SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP----------TKA-----Y--DG---LP 240 (293)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc----------ccc-----c--cC---CC
Confidence 112357999999999998877655 37999999999775542210 000 0 00 12
Q ss_pred cccHHHHHHHHHHHHhcC
Q 035631 231 YLYCADVAEAFDVILHRG 248 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~ 248 (684)
.+..+++|+.++.++.+.
T Consensus 241 ~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 241 ALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 367899999999999864
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-14 Score=143.36 Aligned_cols=196 Identities=13% Similarity=0.113 Sum_probs=128.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY 86 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999865 35678999999988877654 5799
Q ss_pred EEEcceecCCC----CccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 423 VLNAAGITGRP----NVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 423 Vih~a~~~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|||+||..... ..+.........+++|+.++.++++++... +.++|++||...|.
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------- 150 (250)
T PRK07774 87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---------------- 150 (250)
T ss_pred EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC----------------
Confidence 99999965210 112233455677899999999999999864 23799999987663
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhhh-----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIFV-----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+.+.|+.+|+..|.+....... ..+...++..+...... ......+....++
T Consensus 151 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~------------------~~~~~~~~~~~~~ 207 (250)
T PRK07774 151 -----YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR------------------TVTPKEFVADMVK 207 (250)
T ss_pred -----CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc------------------ccCCHHHHHHHHh
Confidence 4468999999998874332222 22222222211100000 0000011111111
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
..+. .-+.+++|++++++.++... .+..||+.++..++
T Consensus 208 ~~~~----~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 208 GIPL----SRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred cCCC----CCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 1110 11367899999999998754 34589998886543
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=134.92 Aligned_cols=216 Identities=16% Similarity=0.172 Sum_probs=145.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|++++|||||+|.||+++++.|+++ |++|++++|+... ....+. ..++.++.+|+.|.+++..++.. .
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYP-AIDGLR----QAGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchh-HHHHHH----HcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 4578999999999999999999999 8999999996521 111111 12467889999999887766533 2
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----C-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----G-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
++|++||+||..... ..+++....+++|+.++..+.+++... + ...++|++||.....
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~------------- 140 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK------------- 140 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-------------
Confidence 599999999964322 123345677899999988776666431 1 135899999854321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
+......|+.+|...|.+++.++.++ ++++..++|+.+.-.... . ...........++. -+...
T Consensus 141 -~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~---~~~~~~~~~~~~~~---------~~~~~ 206 (236)
T PRK06483 141 -GSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-D---AAYRQKALAKSLLK---------IEPGE 206 (236)
T ss_pred -CCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-C---HHHHHHHhccCccc---------cCCCH
Confidence 11123469999999999999998875 588999999988532211 1 11111222221111 12457
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG-VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~-~~~~~~ni~~~~ 260 (684)
+|+++++..++... ..++.+.+.+|.
T Consensus 207 ~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 207 EEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 99999999988643 245677776553
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=144.92 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=138.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
.+++||||++|+||.+++++|+++|++| .++.+|++|.+++..+++.. +
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR 86 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999876 23457999999988888754 6
Q ss_pred CCeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 420 PTHVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 420 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+|+|||+||.... +..+...+.....+++|+.++.++++++.+. + .+++++||...+.+
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------- 152 (276)
T PRK05875 87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-------------- 152 (276)
T ss_pred CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC--------------
Confidence 7999999985411 1112223445678899999999999887653 2 36999999865521
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHHhhhh-----hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLEIFVL-----VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
.. +.+.|+.+|...|.+........ .+...++..+.+... .. .. ..........
T Consensus 153 ---~~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~-----~~--------~~----~~~~~~~~~~ 211 (276)
T PRK05875 153 ---HR-WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV-----AP--------IT----ESPELSADYR 211 (276)
T ss_pred ---CC-CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccc-----cc--------cc----cCHHHHHHHH
Confidence 11 44789999999998854433322 222222221110000 00 00 0000000000
Q ss_pred hcccccccC-CCccchhhHHHHHHHHHhcC----ccceeEecCCCcc----cHHHHHHHHHhhcC
Q 035631 568 RYNKVVNIP-NSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI----SHNEILELYKEYID 623 (684)
Q Consensus 568 ~~~~~~~~~-~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~----s~~e~~~~i~~~~g 623 (684)
. ..+ ..+++++|+++++.++++++ .+..|+++++..+ ++.|+++.+.+..+
T Consensus 212 ~-----~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 212 A-----CTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred c-----CCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 0 001 13488999999999999865 2458999988876 88888888876654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-14 Score=141.46 Aligned_cols=200 Identities=11% Similarity=0.025 Sum_probs=126.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++||||||+|+||++++++|+++|++| .++.+|+++.+++..+++.. ++|
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 86 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVAD 86 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999875 23557888888888777653 579
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|||+||....... +.........+++|+.++.++++++.+. ..++|++||...|. +..
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~ 149 (252)
T PRK06077 87 ILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------------PAY 149 (252)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------------CCC
Confidence 99999996521111 1112233577899999999999999864 23699999986663 112
Q ss_pred CCCChhhhhhHhHhhhhhHHhhhh----hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEIFVL----VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+.+.|+.+|...|.+.+...... .+...++..+.+.. ...... ..+. ....+. + ..
T Consensus 150 -~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~-~~~~~~---------~~~~--~~~~~~----~---~~ 209 (252)
T PRK06077 150 -GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL-GESLFK---------VLGM--SEKEFA----E---KF 209 (252)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH-HHhhhh---------cccc--cHHHHH----H---hc
Confidence 56789999999998744322221 12222222111110 000000 0000 000000 0 00
Q ss_pred ccCCCccchhhHHHHHHHHHhcC--ccceeEecCCCc
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGV 608 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~ 608 (684)
.....+++++|++++++.+++.. .++.||+.++..
T Consensus 210 ~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 210 TLMGKILDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 11124599999999999999755 356999988754
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=142.71 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=134.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|++||
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 86 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFN 86 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999876 46788999999998888764 5899999
Q ss_pred cceecCC-CCccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecce-eeecCCCCCCCCCCCCccCCCCC
Q 035631 426 AAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 426 ~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|+.... +..+...+.....+++|+.++.++++++... +.++|++||.. .++ ..
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~ 148 (257)
T PRK07067 87 NAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG------------------EA 148 (257)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC------------------CC
Confidence 9986521 1122234566788999999999999999743 24799999863 221 11
Q ss_pred CCCChhhhhhHhHhhhhhHH-----hhhhhhhhhhhhhhhHHHHHHh---hhhhhc--cccccceecCCCCCchHHHHhh
Q 035631 498 FTRSFYSKTKAMVTFLSYLE-----IFVLVICIECLINFQVEGLLKA---YENVCT--LRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
+...|+.+|...+.+.... .++..+...++..+.+...... +..... .......++.....+.+
T Consensus 149 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 222 (257)
T PRK07067 149 -LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRM----- 222 (257)
T ss_pred -CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCc-----
Confidence 4568999999988773322 2234444455554433221110 000000 00001111222223344
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
++.+|+++++..++... .+.+|++.+|+.+|
T Consensus 223 ------------~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 223 ------------GVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred ------------cCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 99999999999998754 34599998886654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-14 Score=144.72 Aligned_cols=128 Identities=14% Similarity=0.071 Sum_probs=96.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999999999999866 24568999999998888753 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...|.+.
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~---------------- 153 (274)
T PRK07775 90 VLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR---------------- 153 (274)
T ss_pred EEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----------------
Confidence 9999999652111 1122344556789999999999998763 22 369999998666411
Q ss_pred CCCCCChhhhhhHhHhhhhhH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
. +...|+.+|...|.+...
T Consensus 154 -~-~~~~Y~~sK~a~~~l~~~ 172 (274)
T PRK07775 154 -P-HMGAYGAAKAGLEAMVTN 172 (274)
T ss_pred -C-CcchHHHHHHHHHHHHHH
Confidence 1 346899999999987443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=142.72 Aligned_cols=201 Identities=10% Similarity=0.005 Sum_probs=129.9
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
+++.|+||||||+|++|.+++++|+++|++| .++.+|+.|.+++.+++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3455699999999999999999999999865 35678999999999888754
Q ss_pred CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 419 RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
++|+|||+|+....... +.........++.|+.++.++++++. +.+ .++|++||...++ .
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~--~------------ 148 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR--V------------ 148 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc--c------------
Confidence 57999999986621111 23345567889999999999999885 233 3699999985541 0
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
+.. +...|+.+|...+.+...... +..+...++..+.+........... ...+.......
T Consensus 149 --~~~-~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-----~~~~~~~~~~~------- 213 (251)
T PRK12826 149 --GYP-GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW-----AEAIAAAIPLG------- 213 (251)
T ss_pred --CCC-CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH-----HHHHHhcCCCC-------
Confidence 111 446899999999877433211 2333344444333222111100000 00000000111
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
.+++++|+++++..++.+. .+..|++.+|.
T Consensus 214 ----------~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 214 ----------RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred ----------CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 3499999999999988754 34588887654
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=139.19 Aligned_cols=127 Identities=16% Similarity=0.150 Sum_probs=92.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcce
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAG 428 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~ 428 (684)
|+|++|||||+|+||.+++++|+++ ++| .++.+|++|.+++.++++.+ ++|+|||+|+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3468999999999999999999999 866 45678999999999988864 4799999999
Q ss_pred ecCCCC-ccccccchhhHhhhchhh----hHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 429 ITGRPN-VDWCESHRVETIRTNVMG----TLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
.....+ .+...+.....+++|+.+ +.++++++++.+.++|++||+..+++. . +...|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----------------~-~~~~y 142 (227)
T PRK08219 81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN-----------------P-GWGSY 142 (227)
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC-----------------C-CCchH
Confidence 652111 011223345568888888 455555555566689999998665311 1 34679
Q ss_pred hhhhHhHhhhhh
Q 035631 504 SKTKAMVTFLSY 515 (684)
Q Consensus 504 ~~sK~~~E~~~~ 515 (684)
+.+|...+.+..
T Consensus 143 ~~~K~a~~~~~~ 154 (227)
T PRK08219 143 AASKFALRALAD 154 (227)
T ss_pred HHHHHHHHHHHH
Confidence 999998887643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=137.27 Aligned_cols=225 Identities=13% Similarity=0.094 Sum_probs=148.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.++++|||||+|.||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++..
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEE--NLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 4678999999999999999999999 899999999642 1111110 01134678899999999888777642
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|++||+||..... ...++....+++|+.++..+.+++ ++.+ ..++|++||...+...
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~---------- 151 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPI---------- 151 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCC----------
Confidence 3699999999965322 233455667888977766555444 4444 5799999997654211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC---------CChHHHHHHHHHcCCceEEec
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP---------EKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.....|+.+|...+.+.+.++.+. ++++..+.||.+-.+.... ....+......... .+
T Consensus 152 ----~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p--- 222 (263)
T PRK08339 152 ----PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP--IP--- 222 (263)
T ss_pred ----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc--CC---
Confidence 123469999999999988887664 7899999999886542100 00001111111111 11
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
...+...+|+|.++..++... ..++.+.+.+|...+
T Consensus 223 ----~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 223 ----LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred ----cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 123567899999999988643 356677777665443
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=136.06 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=144.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|.||.++++.|+++ |++|++..|+... ....+.. .....++.++.+|+.|.+++..++..
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEE-EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 8899888775321 1111110 01124577889999999987776532
Q ss_pred --CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHH----HHHHhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLL----EACKLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll----~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||........ +..+..+++|+.++..++ ..+.+.+...++|++||...+.
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~----------- 150 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI----------- 150 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------
Confidence 3689999999975432222 334467899988776554 4445543246899999954321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
+..+...|+.+|.+.+.+.+.++.+. +++++.++|+.+..+.......-+..........+ . ..+
T Consensus 151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~-------~~~ 218 (261)
T PRK08936 151 ---PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP--M-------GYI 218 (261)
T ss_pred ---CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC--C-------CCC
Confidence 22334579999988888887776543 89999999999987742111001111122221111 1 135
Q ss_pred ccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
...+|+++++..++.... .+..+.+.++
T Consensus 219 ~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 219 GKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred cCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 667999999999886432 3445555544
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=136.96 Aligned_cols=222 Identities=18% Similarity=0.133 Sum_probs=143.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
++++||||+|+||.+++++|++. |++|++++|+.. ....+.. ......+.++.+|+.|.+.+.+++.. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEE--TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999 899999998632 1111100 01134578899999999988776532 2
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|+|||+++.... ....++....+++|+.++..+++++. +.+...++|++||.......
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 144 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------ 144 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------
Confidence 68999999997543 22223445678999998887766654 33323689999985543211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEE------ecCCCce
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI------HGNGSNV 228 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 228 (684)
...+.|+.+|...+.+++.+..+. ++++++++|+.+..+.. ..+............ +......
T Consensus 145 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (254)
T TIGR02415 145 --PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW------EEIDEETSEIAGKPIGEGFEEFSSEIAL 216 (254)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh------hhhhhhhhhcccCchHHHHHHHHhhCCC
Confidence 124569999999999998776663 78899999998865421 011100000000000 0000011
Q ss_pred EecccHHHHHHHHHHHHhcCC---CCcEEEecC
Q 035631 229 RSYLYCADVAEAFDVILHRGV---IGHVYNVGT 258 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~ 258 (684)
..+...+|+++++..++.... .+..+.+.+
T Consensus 217 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 249 (254)
T TIGR02415 217 GRPSEPEDVAGLVSFLASEDSDYITGQSILVDG 249 (254)
T ss_pred CCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence 236788999999999997643 344444443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-13 Score=139.49 Aligned_cols=215 Identities=18% Similarity=0.113 Sum_probs=144.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|.||.++++.|.++ |++|++++|+.. ....+.. ......+..+.+|+.|.+++..++..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEA--ELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999642 2211111 11123456677999999888776532
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||..... ...++....+++|+.++.++++++... ....+||++||...+...
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 150 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA------------ 150 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC------------
Confidence 3689999999975422 122334567899999999999888532 113689999997665322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.+ .++.+.++.|+++..+......-............+.+. ..+...
T Consensus 151 --~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~ 221 (296)
T PRK05872 151 --PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPL-------RRTTSV 221 (296)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcc-------cCCCCH
Confidence 12356999999999998877644 489999999999876532110000011111111111111 234678
Q ss_pred HHHHHHHHHHHhcCC
Q 035631 235 ADVAEAFDVILHRGV 249 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~ 249 (684)
+|+++++..++....
T Consensus 222 ~~va~~i~~~~~~~~ 236 (296)
T PRK05872 222 EKCAAAFVDGIERRA 236 (296)
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999987543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=135.81 Aligned_cols=200 Identities=18% Similarity=0.175 Sum_probs=136.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc---cccCCCCCCCCCceEEEecCCCHHHHHHhhc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS---LKNLHPSRASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
..++|+||||+|.||++++++|++++ +++|++++|+..... .+.+.. ....+++++.+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPRRDAAVAQMKA-AGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchhHHHHHHHHHh-cCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 34789999999999999999999983 489999999753200 111111 112368899999999887655442
Q ss_pred cCCCCEEEEcCccCCcC-CCCCChH---HHHHHHHHHHHH----HHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 84 SEGIDTIMHFAAQTHVD-NSFGNSF---EFTNNNIYGTHV----LLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~-~~~~~~~---~~~~~n~~~~~~----ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..++|++||++|..... ..+.+.. +.+++|+.++.. ++.++++.+ ..++|++||...+..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~----------- 152 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERV----------- 152 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCC-----------
Confidence 23799999999875321 1222222 458999987776 566666655 689999999754221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYH---RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|+....+.+.+. ..+++++++++||++..+... .... . ...+
T Consensus 153 ---~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------------~~~~-----~----~~~~ 207 (253)
T PRK07904 153 ---RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------------HAKE-----A----PLTV 207 (253)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------------cCCC-----C----CCCC
Confidence 1123469999999987765553 345899999999999764210 0000 0 0136
Q ss_pred cHHHHHHHHHHHHhcCC
Q 035631 233 YCADVAEAFDVILHRGV 249 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~ 249 (684)
..+|+|+.++.++.++.
T Consensus 208 ~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 208 DKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 78999999999998653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-13 Score=139.37 Aligned_cols=212 Identities=17% Similarity=0.121 Sum_probs=144.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|.||+++++.|+++ |++|++++|+.. .+..+... .....+.++.+|+.|.+++..++..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~--~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEE--ALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 4579999999999999999999999 899999999642 22211110 1124577889999999988876632
Q ss_pred -CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||........ ++....+++|+.++.++.+++. +.+ ..++|++||...+...
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~---------- 150 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQ---------- 150 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCC----------
Confidence 4689999999975432222 3344578999999988877763 333 4689999997654321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.....|+.+|...+.+.+.+..+ .++.++.+.|+.+..+....... . .+... .....+
T Consensus 151 ----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~-------~-~~~~~------~~~~~~ 212 (330)
T PRK06139 151 ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN-------Y-TGRRL------TPPPPV 212 (330)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc-------c-ccccc------cCCCCC
Confidence 12357999999888877776654 26889999999998774311100 0 00000 011235
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEec
Q 035631 232 LYCADVAEAFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~~~~~~ni~ 257 (684)
...+|+|++++.++.++.. .+.++
T Consensus 213 ~~pe~vA~~il~~~~~~~~--~~~~g 236 (330)
T PRK06139 213 YDPRRVAKAVVRLADRPRA--TTTVG 236 (330)
T ss_pred CCHHHHHHHHHHHHhCCCC--EEEcC
Confidence 7899999999999976542 44444
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-14 Score=139.45 Aligned_cols=201 Identities=12% Similarity=0.077 Sum_probs=127.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+.|.+++..+++.. .+|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 379999999999999999999999865 35678999999887776653 3799
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+|+...... .+.........+..|+.++..+++++. +.+. ++|++||...+.+. +
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---~------------- 145 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---P------------- 145 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC---C-------------
Confidence 999998652111 112233445678899999888888874 4444 69999987554311 0
Q ss_pred CCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhc-ccccc-----ceecCCCCCchHHHH
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCT-LRLRM-----PISSDLSNPRNFVTK 565 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~g~~~~~~~~~~~ 565 (684)
....|+.+|...+.+..... .+..+...++..+.++.....+..... ...+. .....+...+.
T Consensus 146 --~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (255)
T TIGR01963 146 --FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKR---- 219 (255)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCcccc----
Confidence 23579999998887743221 133444455554433322111111100 00000 00111222233
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
++|++|+|++++.++++. .++.|++.++.
T Consensus 220 -------------~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 220 -------------FVTVDEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred -------------CcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 499999999999999753 24479998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-13 Score=136.83 Aligned_cols=208 Identities=18% Similarity=0.200 Sum_probs=140.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-----cccCCC--CCCCCCceEEEecCCCHHHHHHhh
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-----LKNLHP--SRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+.+++++||||+|+||+++++.|+++ |++|++++|+..... +..... .....++.++.+|+.+.+.+..++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 34579999999999999999999999 899999998643110 000000 011235788899999999887776
Q ss_pred cc-----CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCC
Q 035631 83 VS-----EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 83 ~~-----~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.. .++|+|||+||........ ++....+++|+.++.++++++... ..-.++|++||.....
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------- 154 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD------- 154 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc-------
Confidence 43 2799999999975432222 334567889999999999998632 1135889988743210
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.....+...|+.+|.+.|.+++.++.+. +++++.+.|+.+.... . ......+. ..
T Consensus 155 -----~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~-----~----~~~~~~~~--------~~ 212 (273)
T PRK08278 155 -----PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA-----A----VRNLLGGD--------EA 212 (273)
T ss_pred -----ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH-----H----HHhccccc--------cc
Confidence 0111345689999999999999887764 7888999998432211 1 11111111 01
Q ss_pred eEecccHHHHHHHHHHHHhcC
Q 035631 228 VRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~ 248 (684)
...+...+|+|++++.++...
T Consensus 213 ~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 213 MRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred ccccCCHHHHHHHHHHHhcCc
Confidence 123567899999999998754
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=130.84 Aligned_cols=191 Identities=21% Similarity=0.186 Sum_probs=139.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~Vi 91 (684)
|+++||||+|.||.++++.|.++ ++|++++|+.. .+++|+.|.+++..++... ++|+||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999987 78999988531 3689999999988887543 799999
Q ss_pred EcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 92 HFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 92 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
|+||..... ...++....+++|+.++.++.+++... ....+++++||..... +......|+
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~--------------~~~~~~~Y~ 126 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE--------------PIPGGASAA 126 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC--------------CCCCchHHH
Confidence 999965432 222345567889999999999888642 1136799998854321 112235799
Q ss_pred HHHHHHHHHHHHHHHh--cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHH
Q 035631 167 ATKAGAEMLVMAYHRS--YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
.+|...+.+.+.++.+ .++++..++||++-.+.. .. +..++ . ..++..+|+|+++..+
T Consensus 127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-------~~------~~~~~--~-----~~~~~~~~~a~~~~~~ 186 (199)
T PRK07578 127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-------KY------GPFFP--G-----FEPVPAARVALAYVRS 186 (199)
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-------hh------hhcCC--C-----CCCCCHHHHHHHHHHH
Confidence 9999999999887765 478889999997733210 00 00010 1 1357899999999999
Q ss_pred HhcCCCCcEEEec
Q 035631 245 LHRGVIGHVYNVG 257 (684)
Q Consensus 245 ~~~~~~~~~~ni~ 257 (684)
++....+++|+++
T Consensus 187 ~~~~~~g~~~~~~ 199 (199)
T PRK07578 187 VEGAQTGEVYKVG 199 (199)
T ss_pred hccceeeEEeccC
Confidence 9876677777754
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=137.07 Aligned_cols=218 Identities=16% Similarity=0.167 Sum_probs=148.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||.++++.|+++ |++|++++|+... ....++.++.+|+.|.+.+..++..
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGD---------GQHENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCccc---------cccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999986421 1123678899999999988776643
Q ss_pred CCCCEEEEcCccCCcC-------------CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD-------------NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~ 148 (684)
..+|+|||+||..... ...++....+++|+.++..+++++... ....++|++||...+...
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 152 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS--- 152 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---
Confidence 3689999999964321 122344567899999999999888642 113689999997654221
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCCh-----------HHHHHHHHH
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKL-----------IPKFILLAM 214 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~-----------~~~~~~~~~ 214 (684)
.....|+.+|...+.+++.++.+ +++++.+++||.+-......... ...+.....
T Consensus 153 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (266)
T PRK06171 153 -----------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYT 221 (266)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhc
Confidence 12357999999999999888765 48999999999884211100000 011111111
Q ss_pred cCCceEEecCCCceEecccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 215 KGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 215 ~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
.....++ ..+...+|+|.++..++.... .++++++.+|
T Consensus 222 ~~~~~p~-------~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 222 KTSTIPL-------GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred ccccccC-------CCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 1001111 234677999999998886432 4566776554
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=139.21 Aligned_cols=219 Identities=11% Similarity=0.027 Sum_probs=137.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. .+|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999876 34578999999988877754 679999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...+.....+++|+.++..+++++. +.+. ++|++||...+.+.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------------ 144 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP------------------ 144 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC------------------
Confidence 9999762111 123345677889999999988888863 3333 699999986663111
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
..+.|+.+|+..+.+..... .+..+...++..+.+...... .... .....+ ......-...
T Consensus 145 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~------------~~~~-~~~~~~-~~~~~~~~~~ 210 (275)
T PRK08263 145 MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTS------------AKRA-TPLDAY-DTLREELAEQ 210 (275)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccc------------cccC-CCchhh-hhHHHHHHHH
Confidence 33579999999887632221 233333333331111000000 0000 000011 0000000000
Q ss_pred ccCCCc-cchhhHHHHHHHHHhcC-ccceeEec-CCCcccHHHHHHHHHhh
Q 035631 574 NIPNSM-TVLDEMLPIAIEMARRN-CRGAWNFT-NPGVISHNEILELYKEY 621 (684)
Q Consensus 574 ~~~~~~-i~v~D~~~~~~~~~~~~-~~g~~ni~-~~~~~s~~e~~~~i~~~ 621 (684)
.....+ ++.+|++++++.+++.+ ..+.|.++ .++.+++.++.+.+.+-
T Consensus 211 ~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 211 WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW 261 (275)
T ss_pred HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence 011244 88999999999999876 44545554 45688999998888764
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-14 Score=139.02 Aligned_cols=200 Identities=14% Similarity=0.092 Sum_probs=125.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. .+|+
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 84 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI 84 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999876 35788999999998888754 5799
Q ss_pred EEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+|+....... +.........+++|+.++.++++.+. +.+. ++|++||...+.+ .
T Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------------~ 147 (258)
T PRK12429 85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------------S 147 (258)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------------C
Confidence 9999986521111 11223445678899999665555554 4444 6999998854421 1
Q ss_pred CCCCChhhhhhHhHhhhhhHH---h--hhhhhhhhhhhhhhHHHHHHhhhhhhcc-cccc-----ceecCCCCCchHHHH
Q 035631 497 NFTRSFYSKTKAMVTFLSYLE---I--FVLVICIECLINFQVEGLLKAYENVCTL-RLRM-----PISSDLSNPRNFVTK 565 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~g~~~~~~~~~~~ 565 (684)
. +.+.|+.+|...+.+.... . .+..+...++..+.++.....+...... .... ..++.....+.
T Consensus 148 ~-~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 222 (258)
T PRK12429 148 A-GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKR---- 222 (258)
T ss_pred C-CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccc----
Confidence 1 4568999999888763222 1 1223334444444333222221111000 0000 01111112234
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCC
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNP 606 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~ 606 (684)
+++++|+++++..++... . +..|++.+|
T Consensus 223 -------------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 223 -------------FTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred -------------cCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 499999999999998753 2 347888765
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-13 Score=149.48 Aligned_cols=233 Identities=17% Similarity=0.155 Sum_probs=149.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+...... ..+........+..+.+|+.|.+++..++..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 8999999996421110 1111001123567889999999998877643
Q ss_pred --CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||........ ++....+++|+.+...+.+.+ ++.+...++|++||...+...
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~--------- 560 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--------- 560 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC---------
Confidence 2799999999975432222 234456788888876665444 333323589999996543211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCcee-CCCCCCCChHHHHHHHHHcCCc----eEEecCCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVY-GPNQFPEKLIPKFILLAMKGQQ----LPIHGNGS 226 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 226 (684)
.....|+.+|.+.+.+++.++.+ .++++..++|+.|+ |.+........... ...+.. ...+....
T Consensus 561 -----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~ 633 (676)
T TIGR02632 561 -----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERA--AAYGIPADELEEHYAKRT 633 (676)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhh--hcccCChHHHHHHHHhcC
Confidence 12357999999999999988776 37899999999987 43321111100000 000000 00001111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+++.+|+|+++..++... ..+.++++.+|.
T Consensus 634 ~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 634 LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 2235688999999999888642 346788887764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=139.48 Aligned_cols=185 Identities=12% Similarity=0.069 Sum_probs=130.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++++||||||+||.+++++|+++ |++|++.+|+..... ...+........+.++.+|+.|.+++..++..
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 445689999999999999999999999 899999999742111 11111111123578899999999988766532
Q ss_pred ---CCCCEEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHHh---cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACKL---TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|++||+||..... ...+..+..+.+|+.+...+.+.+.. .+ ..++|++||...+...... ....+
T Consensus 89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~--~~~~~ 165 (313)
T PRK05854 89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINW--DDLNW 165 (313)
T ss_pred HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCc--ccccc
Confidence 3689999999976432 23456777899999998777766642 22 3689999987654321110 01122
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGP 198 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~ 198 (684)
..+..+...|+.||.+.+.+.+.++.+ .++.+..+.||.+-.+
T Consensus 166 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 166 ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 233455678999999999999888753 3688999999998654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-14 Score=139.28 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=95.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-------
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV------- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~------- 418 (684)
.++|+||||+|+||.+++++|+++|+.| .++.+|++|.+++..+++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 3589999999999999999999999865 35668999999998887753
Q ss_pred ----CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc--C-CeEEEEecceeeecCCCCCCCCCCCC
Q 035631 419 ----RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK--N-VLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 419 ----~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~-~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
++|+|||+||....... +.........+++|+.++.++++++.+. . .++|++||..++.+.
T Consensus 86 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~----------- 154 (254)
T PRK12746 86 VGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF----------- 154 (254)
T ss_pred cCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----------
Confidence 57999999996521111 1122333567789999999999999863 2 379999998776311
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhh
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...|.+.
T Consensus 155 ------~-~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 155 ------T-GSIAYGLSKGALNTMT 171 (254)
T ss_pred ------C-CCcchHhhHHHHHHHH
Confidence 1 4467999999998773
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-13 Score=134.92 Aligned_cols=207 Identities=15% Similarity=0.176 Sum_probs=134.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-------
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE------- 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------- 85 (684)
|+||||||+|+||++++++|+++ |++|++++|+.. .....+.. ....+++++.+|+.+.+++..++...
T Consensus 2 k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEK--GTHVISISRTEN-KELTKLAE-QYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCch-HHHHHHHh-ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 68999999999999999999999 899999998642 11111111 12346888999999998887766321
Q ss_pred --CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 --~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
+..++||+||.... ..+.+.....+++|+.++..+++.+ ++.+..+++|++||...+.
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 146 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN----------- 146 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------
Confidence 12289999987532 2222344556778888765555444 4333246899999965432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCC-----CCChHHHHHHHHHcCCceEEecC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQF-----PEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
+..+...|+.+|...+.+++.++.+ .++++..++||.+-.+... ....... ........ ..
T Consensus 147 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~-----~~ 217 (251)
T PRK06924 147 ---PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-LDRFITLK-----EE 217 (251)
T ss_pred ---CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchH-HHHHHHHh-----hc
Confidence 2234567999999999999888755 3688899999987644210 0000000 01111000 01
Q ss_pred CCceEecccHHHHHHHHHHHHhc
Q 035631 225 GSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
..+...+|+|+.++.++..
T Consensus 218 ----~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 218 ----GKLLSPEYVAKALRNLLET 236 (251)
T ss_pred ----CCcCCHHHHHHHHHHHHhc
Confidence 1247789999999999875
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.8e-13 Score=131.40 Aligned_cols=224 Identities=16% Similarity=0.112 Sum_probs=149.9
Q ss_pred CCCCCEEEEEcCCc-hhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 9 SYKPKKILITGAAG-FIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG-~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+.++++|||||+| -||+++++.|+++ |++|++.+|+..... ...+.......++..+++|+.+.+.+..++..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 34568999999998 5999999999999 899999988642110 01111101123578899999999888776643
Q ss_pred ----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|+|||+||..... ...+.....+++|+.++..+++++.. .+...++|++||...+-
T Consensus 92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~--------- 162 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR--------- 162 (262)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC---------
Confidence 3789999999964321 12234556778999999888877653 21136888888854331
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+..+...|+.+|++.+.+.+.++.+ +++++..++|+.+..+..... .............++ .
T Consensus 163 -----~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~---------~ 227 (262)
T PRK07831 163 -----AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAF---------G 227 (262)
T ss_pred -----CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCC---------C
Confidence 1123456999999999999988766 479999999999988743111 112223333322221 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGT 258 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~ 258 (684)
-+...+|+|+++..++... ..|+.+.+.+
T Consensus 228 r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 228 RAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred CCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 2456799999999988653 3456666654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-13 Score=133.97 Aligned_cols=205 Identities=16% Similarity=0.115 Sum_probs=140.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 85 (684)
.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+.+..++.. .
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAE--KLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999 899999999742 1111110 11234688999999999887766532 4
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.+|+|||+||...... ..+.....+++|+.++.++++++... ....++|++||...+...
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------- 146 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------- 146 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-------------
Confidence 6899999999754321 22234567789999999999887541 124689999885443111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.....|+.+|...+.+++.++.+ .+++++.+.|+.+..+... ...... ... . ...+...+
T Consensus 147 -~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~--~~~--~------~~~~~~~~ 209 (263)
T PRK09072 147 -PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS------EAVQAL--NRA--L------GNAMDDPE 209 (263)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh------hhcccc--ccc--c------cCCCCCHH
Confidence 12356999999999888777755 3788999999987654211 000000 000 0 01356789
Q ss_pred HHHHHHHHHHhcCC
Q 035631 236 DVAEAFDVILHRGV 249 (684)
Q Consensus 236 D~a~~i~~~~~~~~ 249 (684)
|+|++++.++++..
T Consensus 210 ~va~~i~~~~~~~~ 223 (263)
T PRK09072 210 DVAAAVLQAIEKER 223 (263)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.4e-13 Score=131.98 Aligned_cols=214 Identities=19% Similarity=0.128 Sum_probs=143.0
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc-----CCC
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS-----EGI 87 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 87 (684)
||||||+|+||.++++.|+++ |++|++++|+... ....+... ....++.++.+|+.|.+++..++.. ...
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRS-DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999 8999998875321 11111100 1124688999999999987766532 367
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH-----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK-----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
|++||++|..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~------------- 143 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN------------- 143 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC-------------
Confidence 9999999965422 2334566788999999999988762 223 4789999996543211
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.....|+.+|...+.+.+.++.+ .+++++.++|+.+.++... ..... .......- ++ ..+...+
T Consensus 144 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~-~~~~~~~~--~~-------~~~~~~~ 210 (239)
T TIGR01831 144 -RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA--EVEHD-LDEALKTV--PM-------NRMGQPA 210 (239)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch--hhhHH-HHHHHhcC--CC-------CCCCCHH
Confidence 12346999999998888777654 4899999999998776431 11111 11111111 11 1235679
Q ss_pred HHHHHHHHHHhcCC---CCcEEEecC
Q 035631 236 DVAEAFDVILHRGV---IGHVYNVGT 258 (684)
Q Consensus 236 D~a~~i~~~~~~~~---~~~~~ni~~ 258 (684)
|+++++..++..+. .+....+.+
T Consensus 211 ~va~~~~~l~~~~~~~~~g~~~~~~g 236 (239)
T TIGR01831 211 EVASLAGFLMSDGASYVTRQVISVNG 236 (239)
T ss_pred HHHHHHHHHcCchhcCccCCEEEecC
Confidence 99999999987532 344555543
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=131.36 Aligned_cols=207 Identities=22% Similarity=0.202 Sum_probs=146.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCC---CCCCceEEEecCCCHHHHHHhhcc-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR---ASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+++++++|||||+.||..+++.|.++ |++|+.+.|+. +++..+.... ..-.++++.+|+.+.+.+..+...
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~--~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR--GYNLILVARRE--DKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcH--HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH
Confidence 456789999999999999999999999 99999999974 3333333221 123478899999999988776532
Q ss_pred ----CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|++||+||.... +.++++..+.+++|+.++..|-.+.. +.+ ..++|.++|...|-+.
T Consensus 79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~------- 150 (265)
T COG0300 79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPT------- 150 (265)
T ss_pred HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC-------
Confidence 379999999997643 34555666788999998777666553 434 5799999998776332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.-...|+.||+..-.+.+....+ .|+.++.+.||.+.-..-.. .+..... ....+
T Consensus 151 -------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~------------~~~~~~~---~~~~~ 208 (265)
T COG0300 151 -------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA------------KGSDVYL---LSPGE 208 (265)
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc------------ccccccc---ccchh
Confidence 12357999998877766555444 47899999999876542210 0000110 00123
Q ss_pred ecccHHHHHHHHHHHHhcCC
Q 035631 230 SYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~ 249 (684)
-++..+|+|+..+..+....
T Consensus 209 ~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 209 LVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred hccCHHHHHHHHHHHHhcCC
Confidence 56889999999999998643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=129.65 Aligned_cols=221 Identities=14% Similarity=0.069 Sum_probs=147.4
Q ss_pred CCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++||||+ +-||+.++++|+++ |++|++.+|+.... ..+... ....+.++++|+.|.+++.++++.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMK--KSLQKL-VDEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHH--HHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 45899999999 79999999999999 89999998863211 111111 123577899999999887766532
Q ss_pred -CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|++||+||.... ....++....+++|+.++..+.+++... ..-.++|++||.....
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----------- 149 (252)
T PRK06079 81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER----------- 149 (252)
T ss_pred hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc-----------
Confidence 369999999997532 1222345567889999988888777542 1136899999854321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.|-.+......--..+........ +. ..+
T Consensus 150 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~r~ 217 (252)
T PRK06079 150 ---AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRT--VD-------GVG 217 (252)
T ss_pred ---cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcC--cc-------cCC
Confidence 1112356999999999999888765 47999999999987653210000112222222211 11 135
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+|+|+++..++... ..++++.+.++
T Consensus 218 ~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 218 VTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred CCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 67899999999998653 24566666544
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=137.38 Aligned_cols=199 Identities=13% Similarity=0.061 Sum_probs=127.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4589999999999999999999999854 46678999999988877755 68
Q ss_pred CeEEEcceecCCCC---ccccccchhhHhhhchhhhHHHHHHHHHc-----C-----C-eEEEEecceeeecCCCCCCCC
Q 035631 421 THVLNAAGITGRPN---VDWCESHRVETIRTNVMGTLTLADVCKEK-----N-----V-LLMNFATGCIYEYDSMHPQGS 486 (684)
Q Consensus 421 d~Vih~a~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~-----~-~~i~~SS~~vy~~~~~~~~~~ 486 (684)
|+|||+||...... .+.+.+.....+++|+.++.++++++... + . ++|++||...+.+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 154 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------- 154 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC-------
Confidence 99999998652111 11233556678999999999999998653 1 2 49999997654211
Q ss_pred CCCCccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCch
Q 035631 487 SIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 487 ~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 561 (684)
. +.+.|+.+|...|.+..... .+..+...++..+.+...... ...
T Consensus 155 ----------~-~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-------------------~~~ 204 (256)
T PRK12745 155 ----------P-NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV-------------------TAK 204 (256)
T ss_pred ----------C-CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc-------------------chh
Confidence 1 44689999999987733222 223333344432221110000 001
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
+ .+.+... ...-..+.+.+|+++++..++... . +..|++.++...
T Consensus 205 ~-~~~~~~~--~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 205 Y-DALIAKG--LVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred H-Hhhhhhc--CCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 1 0011100 000113489999999999988644 2 348999876543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=130.55 Aligned_cols=190 Identities=16% Similarity=0.079 Sum_probs=136.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhh---ccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLL---VSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~~~d 88 (684)
|++++||||+|+||++++++|++. |++|++++|+.. ....+.. .+++++.+|+.+.+.+..++ ...++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~--~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAA--ALAALQA----LGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHH--HHHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 368999999999999999999998 899999998642 2222211 24678999999999887764 223699
Q ss_pred EEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcc-cccCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDE-VYGETDMESDIGNPEASQL 159 (684)
Q Consensus 89 ~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~-vyg~~~~~~~~~~~e~~~~ 159 (684)
+|||++|..... ...+++...++.|+.++.++++++... ....+++++||.. .++... .
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~ 140 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT------------G 140 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc------------C
Confidence 999999975321 133456678899999999999888641 1135789998854 343211 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
.+...|+.+|...+.+++.++.++ +++++.++|+++..+... + ...+..++.+
T Consensus 141 ~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~----------------------~----~~~~~~~~~~ 194 (222)
T PRK06953 141 TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG----------------------A----QAALDPAQSV 194 (222)
T ss_pred CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC----------------------C----CCCCCHHHHH
Confidence 122369999999999999887665 778999999988765310 0 0124568888
Q ss_pred HHHHHHHhc
Q 035631 239 EAFDVILHR 247 (684)
Q Consensus 239 ~~i~~~~~~ 247 (684)
+.+..++..
T Consensus 195 ~~~~~~~~~ 203 (222)
T PRK06953 195 AGMRRVIAQ 203 (222)
T ss_pred HHHHHHHHh
Confidence 888887764
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.9e-13 Score=132.80 Aligned_cols=220 Identities=15% Similarity=0.145 Sum_probs=141.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHH----HHhhc--
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLM----NYLLV-- 83 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~----~~~~~-- 83 (684)
+.++||||+|+||+++++.|+++ |++|+++.|+.. .....+.. ......+.++.+|+.|.+.+ .+++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSA-AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcH-HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 47999999999999999999999 899999876421 11111110 01123466789999998643 23321
Q ss_pred --c-CCCCEEEEcCccCCcCCC----CC-----------ChHHHHHHHHHHHHHHHHHHHhcC---------CCcEEEEE
Q 035631 84 --S-EGIDTIMHFAAQTHVDNS----FG-----------NSFEFTNNNIYGTHVLLEACKLTG---------QVKRFIHV 136 (684)
Q Consensus 84 --~-~~~d~Vih~a~~~~~~~~----~~-----------~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~~i~~ 136 (684)
. .++|+|||+||....... .. .....+++|+.++..+++++.... ...++|++
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 1 369999999996432111 11 144678999999999988764321 12367777
Q ss_pred eCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHH
Q 035631 137 STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLA 213 (684)
Q Consensus 137 SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~ 213 (684)
||.... .+..+...|+.+|+..+.+.+.++.+ .+++++.++||.+..+...+ .......
T Consensus 159 ~s~~~~--------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~~~~ 220 (267)
T TIGR02685 159 CDAMTD--------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQEDY 220 (267)
T ss_pred hhhhcc--------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHHHHH
Confidence 764331 12234457999999999999888766 58999999999987653321 1111222
Q ss_pred HcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 214 MKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.... ++ + ..+...+|++++++.++... ..++.+.+.++..
T Consensus 221 ~~~~--~~---~---~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~ 263 (267)
T TIGR02685 221 RRKV--PL---G---QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263 (267)
T ss_pred HHhC--CC---C---cCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence 1111 11 0 12357899999999998653 2456777765543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.8e-14 Score=133.24 Aligned_cols=165 Identities=19% Similarity=0.190 Sum_probs=117.3
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeE----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccc
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAF----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDW 437 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 437 (684)
|+|+||||++|+.++++|+++|++| +++.+|+.|.+.+.+.++++ |+|||+++.. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~--d~vi~~~~~~---~--- 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGA--DAVIHAAGPP---P--- 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTS--SEEEECCHST---T---
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhc--chhhhhhhhh---c---
Confidence 7999999999999999999999976 67889999999999999988 9999999844 1
Q ss_pred cccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhH
Q 035631 438 CESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 438 ~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
. ....+.+++++|++.++ ++|++||.++|+...... .....+. ...|...|..+|.....
T Consensus 73 --~--------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~e~~~~~ 133 (183)
T PF13460_consen 73 --K--------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLF-------SDEDKPI--FPEYARDKREAEEALRE 133 (183)
T ss_dssp --T--------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEE-------EGGTCGG--GHHHHHHHHHHHHHHHH
T ss_pred --c--------cccccccccccccccccccceeeeccccCCCCCccc-------ccccccc--hhhhHHHHHHHHHHHHh
Confidence 1 16678899999999988 699999999997433321 1111111 25688888888766532
Q ss_pred HhhhhhhhhhhhhhhhHHHHHHhhhhhhcccccccee-cCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhc
Q 035631 517 EIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPIS-SDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARR 595 (684)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~ 595 (684)
.+.+..+.|+..+++.... ...+. ..+....++ ||.+|+|++++.++++
T Consensus 134 --~~~~~~ivrp~~~~~~~~~-----------~~~~~~~~~~~~~~~-----------------i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 134 --SGLNWTIVRPGWIYGNPSR-----------SYRLIKEGGPQGVNF-----------------ISREDVAKAIVEALEN 183 (183)
T ss_dssp --STSEEEEEEESEEEBTTSS-----------SEEEESSTSTTSHCE-----------------EEHHHHHHHHHHHHH-
T ss_pred --cCCCEEEEECcEeEeCCCc-----------ceeEEeccCCCCcCc-----------------CCHHHHHHHHHHHhCC
Confidence 3556666666644332100 00011 122222344 9999999999999874
|
... |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=135.74 Aligned_cols=218 Identities=18% Similarity=0.168 Sum_probs=143.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-C-CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-S-RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++++||||+|+||++++++|+++ |.+|++.++.... ....+.. . ....++.++.+|+.|.+.+..++..
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~-~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASAL-DASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchh-HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 8999998875321 1111110 0 1134577899999999888776642
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--------C--CCcEEEEEeCcccccCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--------G--QVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--------~--~~~~~i~~SS~~vyg~~~~~~ 149 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... + ...++|++||...+...
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 162 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---- 162 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----
Confidence 3699999999976432 223445668899999999999886421 0 02489999986654221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
.....|+.+|...+.+.+.++.+ +++++..+.|+. .. ........ ..+ ... .
T Consensus 163 ----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t-----~~~~~~~~----~~~-~~~---~ 217 (306)
T PRK07792 163 ----------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RT-----AMTADVFG----DAP-DVE---A 217 (306)
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CC-----chhhhhcc----ccc-hhh---h
Confidence 12346999999999998887765 478888888862 11 11111100 000 000 0
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.....+..+|++.++..++... ..+++|.+.++
T Consensus 218 ~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 218 GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence 1123457899999998888642 35677777654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=131.78 Aligned_cols=208 Identities=17% Similarity=0.098 Sum_probs=136.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|+++||||+|+||.++++.|+++ |++|++++|+..... ...+.. .....+.++.+|+.|.+.+..++.. .
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARA-LGGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999 899999998642110 011111 1112345678999999887665532 3
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||++|.... +...++....+++|+.++.++++++.. .+...++|++||...+..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~------------- 144 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA------------- 144 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-------------
Confidence 58999999996532 122334566889999999999998742 222469999999654311
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCC-----hHHHHHHHHHcCCceEEecCCCceE
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGPNQFPEK-----LIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|...+.+.+..+. .+++++++++||.+.++...... ........... . ...
T Consensus 145 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~ 213 (272)
T PRK07832 145 -LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-R---------FRG 213 (272)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-h---------ccc
Confidence 11234699999988877766653 35899999999999876421100 00000000000 0 011
Q ss_pred ecccHHHHHHHHHHHHhc
Q 035631 230 SYLYCADVAEAFDVILHR 247 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~ 247 (684)
..+..+|+|++++.++..
T Consensus 214 ~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 214 HAVTPEKAAEKILAGVEK 231 (272)
T ss_pred CCCCHHHHHHHHHHHHhc
Confidence 347899999999999964
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.5e-13 Score=134.43 Aligned_cols=212 Identities=12% Similarity=0.058 Sum_probs=131.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 85 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVD 85 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3479999999999999999999999866 34678999999998888764 589
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----c--CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----K--NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|||+||...... .+...+.....+++|+.++.++++++.. . +.++|++||...+.+
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~---------------- 149 (275)
T PRK05876 86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP---------------- 149 (275)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC----------------
Confidence 9999999752111 1223344567789999999999999852 3 346999999865531
Q ss_pred CCCCCCChhhhhhHhHhhh----hhH-HhhhhhhhhhhhhhhhHHHHHHhhh---hhhccccccceecCCCCCchHHHHh
Q 035631 495 EPNFTRSFYSKTKAMVTFL----SYL-EIFVLVICIECLINFQVEGLLKAYE---NVCTLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
.. +...|+.+|...+.+ ... ...+..+...++..+.+........ ............+.....+++
T Consensus 150 -~~-~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (275)
T PRK05876 150 -NA-GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN---- 223 (275)
T ss_pred -CC-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccC----
Confidence 11 457899999875544 211 1223444445544333221100000 000000001111222223345
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhh
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEY 621 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~ 621 (684)
++++|++++++.++.++ ..|.+. .+.....+.+.+.+.
T Consensus 224 -------------~~~~dva~~~~~ai~~~--~~~~~~--~~~~~~~~~~~~~~~ 261 (275)
T PRK05876 224 -------------LGVDDIAQLTADAILAN--RLYVLP--HAASRASIRRRFERI 261 (275)
T ss_pred -------------CCHHHHHHHHHHHHHcC--CeEEec--ChhhHHHHHHHHHHH
Confidence 99999999999999754 244443 234455555554443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-12 Score=129.89 Aligned_cols=220 Identities=16% Similarity=0.191 Sum_probs=140.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc-----CC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS-----EG 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 86 (684)
|+||||||+|.||++++++|+++ |++|++++|+... ..... .......+.++.+|+.|.+++.+++.. .+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEEN--LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999 8999999987421 11110 001123577899999999988776632 37
Q ss_pred CCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 87 ~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
+|+|||+||.... ....++....+.+|+.++..+..+ ..+.....++|++||...+..
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~------------ 144 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP------------ 144 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC------------
Confidence 9999999996431 112223334566777665444333 222122479999999765421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh----------HHH-HHHHHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKL----------IPK-FILLAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----------~~~-~~~~~~~~~~~~~~ 222 (684)
..+...|+.+|...+.+.+.++.++ ++++..+.||.+-.+.... .. ... ........ .+
T Consensus 145 --~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~p-- 217 (259)
T PRK08340 145 --MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARE-NLARIAEERGVSFEETWEREVLER--TP-- 217 (259)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHH-HHHhhhhccCCchHHHHHHHHhcc--CC--
Confidence 1234579999999999999888764 6888889999876553200 00 000 00111111 11
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..-+...+|+|+++..++... ..+++..+.+|.
T Consensus 218 -----~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 218 -----LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred -----ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 123567899999999998753 245666666553
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.5e-13 Score=137.17 Aligned_cols=215 Identities=13% Similarity=0.083 Sum_probs=130.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
++++|||||+|++|.++++.|+++|++| .++.+|++|.+++.. ++.. +
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 3479999999999999999999999865 345789999998876 5442 5
Q ss_pred CCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 420 PTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+|+|||+||....... +...+.....+++|+.++.++++++. +.+. ++|++||...+.+
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~--------------- 146 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG--------------- 146 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC---------------
Confidence 7999999986521111 12234556778899999999998864 3443 6999988643211
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHH-----hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLE-----IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. +...|+.+|...+.+.... ..+..+...++..+.+.......... ......+ .....++.....
T Consensus 147 --~~-~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~ 217 (280)
T PRK06914 147 --FP-GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLA-----ENQSETT-SPYKEYMKKIQK 217 (280)
T ss_pred --CC-CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccccc-----ccccccc-cchHHHHHHHHH
Confidence 11 4568999999998774322 22344455555433222111000000 0000000 000011111110
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcCc-cceeEecCCCcccHH
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRNC-RGAWNFTNPGVISHN 612 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~ni~~~~~~s~~ 612 (684)
. .......+++++|++++++.+++++. ...|+++++..+++.
T Consensus 218 ~--~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 218 H--INSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred H--HhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 0 00011245899999999999998873 347898887766664
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.4e-13 Score=131.98 Aligned_cols=202 Identities=16% Similarity=0.108 Sum_probs=135.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCC--HHHHHHhh-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITC--ADLMNYLL- 82 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d--~~~~~~~~- 82 (684)
.+.+++|+||||+|+||+++++.|+++ |++|++++|+.. ....+.. ........++.+|+.+ .+.+..++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQK--KLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChH--HHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH
Confidence 345689999999999999999999999 899999999752 1111100 0112245677889875 23333322
Q ss_pred ---cc--CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCC
Q 035631 83 ---VS--EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 83 ---~~--~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
.. .++|+|||+||.... ...+++....+++|+.++.++++++... ....++|++||....-
T Consensus 79 ~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------ 152 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET------ 152 (239)
T ss_pred HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc------
Confidence 11 368999999996421 1222344457899999988888877432 1247999999844321
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+......|+.+|+..+.+++.++.+. +++++.++||.++++... ... .+
T Consensus 153 --------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~--~~~--------~~--------- 205 (239)
T PRK08703 153 --------PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI--KSH--------PG--------- 205 (239)
T ss_pred --------CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc--ccC--------CC---------
Confidence 11233569999999999998887764 588999999999987431 000 00
Q ss_pred CceEecccHHHHHHHHHHHHhc
Q 035631 226 SNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.........+|++.++..++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 206 EAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred CCccccCCHHHHHHHHHHHhCc
Confidence 0111335789999999988863
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=137.71 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=94.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
++++|||||+|+||.+++++|+++|++| ..+.+|++|.+++..+++.+ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4589999999999999999999999876 34678999999998887754 479999
Q ss_pred EcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||....+.. +.........+++|+.++.++++++.. .+ .++|++||...+.+ ..
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----------------~~- 145 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----------------MP- 145 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----------------CC-
Confidence 99997521111 112233456789999999999999653 33 36999999765421 11
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|+..|.+.
T Consensus 146 ~~~~Y~~sK~a~~~~~ 161 (277)
T PRK06180 146 GIGYYCGSKFALEGIS 161 (277)
T ss_pred CcchhHHHHHHHHHHH
Confidence 4578999999998774
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-13 Score=138.71 Aligned_cols=199 Identities=17% Similarity=0.074 Sum_probs=129.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 135 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGL 135 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999999876 24567999999988887654 68
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|++||+||.... +..+.+.+.....+++|+.++.++++++... +.++|++||...|.+..
T Consensus 136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------- 200 (300)
T PRK06128 136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP--------------- 200 (300)
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC---------------
Confidence 999999996411 1123345677889999999999999999853 34799999987774111
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
....|+.+|...+.+..... .+..+...++..+.+...... . . .......++.....+
T Consensus 201 ---~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~-~-~~~~~~~~~~~~p~~---------- 263 (300)
T PRK06128 201 ---TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--G-Q-PPEKIPDFGSETPMK---------- 263 (300)
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--C-C-CHHHHHHHhcCCCCC----------
Confidence 23569999999987743221 223333333332221110000 0 0 000000011111111
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
.+.+.+|++.+++.++... .+..|++.++..+
T Consensus 264 -------r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 264 -------RPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred -------CCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 3378999999999998754 2348888887554
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.6e-13 Score=133.72 Aligned_cols=222 Identities=18% Similarity=0.142 Sum_probs=145.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++++||||+|+||+++++.|+++ |++|++++|+.. ....+... ....+..+.+|+.+.+++..++.. .
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAA--GLQELEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 899999998642 22222211 123578889999998887766532 3
Q ss_pred CCCEEEEcCccCCcC-----CCC----CChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD-----NSF----GNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~-----~~~----~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|++||+||..... ... +++...+++|+.++..+++++...- ...++|++||...+-.
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~---------- 148 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP---------- 148 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC----------
Confidence 789999999964211 111 1345688999999999999886421 1257888888654311
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCCh--HH----HH-HHHHHcCCceEEecCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKL--IP----KF-ILLAMKGQQLPIHGNG 225 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~--~~----~~-~~~~~~~~~~~~~~~~ 225 (684)
......|+.+|...+.+.+.++.++ .+++..+.||.+..+...+... .. .. ....... ..+
T Consensus 149 ----~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p----- 218 (262)
T TIGR03325 149 ----NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP----- 218 (262)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-----
Confidence 1123469999999999999998775 3778889999987653211000 00 00 0010000 011
Q ss_pred CceEecccHHHHHHHHHHHHhcC----CCCcEEEecCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTK 259 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~ 259 (684)
...+...+|+|+++..++... ..+.++.+.++
T Consensus 219 --~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 219 --IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred --CCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 113456799999998887642 24566666544
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-12 Score=127.62 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=144.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++||||+|.||+++++.|+++ |++|++++|+..... ...+.......++..+.+|+.|.+++..++..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999 899999999642111 01111111123577889999999987766532
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|+|||+||...... ..+++...+++|+.+...+.+++ ++.+ ..++|++||...+...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 153 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPE---------- 153 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCC----------
Confidence 36899999999753221 12234566788887766666554 3333 4799999997654221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCceEEecC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP--------EKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.....|+.+|...+.+.+.++.+ .+++++.++||.+-.+.... ................++.
T Consensus 154 ----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--- 226 (265)
T PRK07062 154 ----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL--- 226 (265)
T ss_pred ----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc---
Confidence 12346999999988888776654 47999999999886652100 0000111111111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|+|+++..++... ..++++.+.+|
T Consensus 227 ----~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 227 ----GRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred ----CCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 13467899999999988642 35667777655
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.9e-13 Score=132.33 Aligned_cols=205 Identities=14% Similarity=0.144 Sum_probs=136.1
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCC--CHHHHHHhh
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDIT--CADLMNYLL 82 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~--d~~~~~~~~ 82 (684)
+.....++||||||+|+||.+++++|+++ |++|++++|+..... ...+.. ....++.++.+|+. +.+.+.+++
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEA-AGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEecccCCCHHHHHHHH
Confidence 34456789999999999999999999999 899999999742110 011111 11235677788886 444443332
Q ss_pred c---c--CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCC
Q 035631 83 V---S--EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 83 ~---~--~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~ 148 (684)
. . .++|+|||+|+.... ....+.....+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~--- 159 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR--- 159 (247)
T ss_pred HHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC---
Confidence 1 1 368999999987532 12223456678999999888888764 334 6899999996543211
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
.....|+.+|...|.+++.++.+. +++++.++|+.+-.+... .. .... +
T Consensus 160 -----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--~~--------~~~~------~- 211 (247)
T PRK08945 160 -----------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--SA--------FPGE------D- 211 (247)
T ss_pred -----------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--hh--------cCcc------c-
Confidence 123469999999999998887665 577888899877554210 00 0000 0
Q ss_pred CceEecccHHHHHHHHHHHHhcC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
...+...+|+++++..++...
T Consensus 212 --~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 212 --PQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred --ccCCCCHHHHHHHHHHHhCcc
Confidence 013467799999999987543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=144.30 Aligned_cols=221 Identities=19% Similarity=0.185 Sum_probs=152.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.++++|||||+|.||.+++++|+++ |++|++++|+.. ....+... ....+..+.+|+.|.+++..++.. .
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAE--GAKKLAEA-LGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 899999999642 22222111 123466789999999988776643 3
Q ss_pred CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 86 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
.+|++||+||.... ....++....+++|+.++.++++++... ....++|++||...+.. .
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------~ 408 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA--------------L 408 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC--------------C
Confidence 68999999997521 1223345678899999999999887653 22369999999765422 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.+...|+.+|+..+.+.+.++.+. ++++..++||.+..+..... ..-........+..+. ..+...+
T Consensus 409 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 479 (520)
T PRK06484 409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPE 479 (520)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHH
Confidence 234579999999999998887654 79999999999977632100 0000111111111111 1246789
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|+|++++.++... ..++.+.+.++
T Consensus 480 dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 480 EVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHHhCccccCccCcEEEECCC
Confidence 9999999998653 35677777655
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=129.85 Aligned_cols=231 Identities=13% Similarity=0.094 Sum_probs=146.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|++.++|||| |+||+++++.|. + |++|++++|+.. ....+... ....++.++.+|+.|.+.+..++..
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~ 74 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEE--NLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL 74 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence 5678999998 799999999995 6 899999999642 11111100 1123577899999999988777643
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCC-C-----C-CCCCCCC-
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETD-M-----E-SDIGNPE- 155 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~-~-----~-~~~~~~e- 155 (684)
..+|+|||+||... ...++...+++|+.++.++++++... ....++|++||........ . . ......+
T Consensus 75 g~id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T PRK06940 75 GPVTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEEL 151 (275)
T ss_pred CCCCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccc
Confidence 36999999999753 23567889999999999999988643 1124567777754432110 0 0 0000000
Q ss_pred -CC----C---CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEe
Q 035631 156 -AS----Q---LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 156 -~~----~---~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~ 222 (684)
.. + ..+...|+.+|+..+.+.+.++.+ +++++..+.||++..+.... ...-...........+ .
T Consensus 152 ~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p--~- 228 (275)
T PRK06940 152 LSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP--A- 228 (275)
T ss_pred cccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC--c-
Confidence 00 0 023467999999999998877655 37899999999987763210 0000011111111111 1
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.-+...+|+|+++..++... ..++.+.+-++
T Consensus 229 ------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg 262 (275)
T PRK06940 229 ------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262 (275)
T ss_pred ------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence 13567899999999988642 24566777655
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.4e-13 Score=131.32 Aligned_cols=169 Identities=16% Similarity=0.130 Sum_probs=120.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---CCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---EGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d 88 (684)
|++|+||||+|+||+++++.|+++ |++|++++|+... ...+. ...++.++.+|+.|.+++..++.. .++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQ--DTALQ---ALPGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcc--hHHHH---hccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 368999999999999999999999 8999999997532 11111 123577888999999887766542 3799
Q ss_pred EEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||..... ...++....+++|+.++..+++++... ....+++++||. +|.... .+..
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~---------~~~~ 142 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVEL---------PDGG 142 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--cccccc---------CCCC
Confidence 999999875321 122334456788999988888877542 113578888874 322111 0112
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGP 198 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 198 (684)
+...|+.+|...+.+++.++.+ .++++..++||++-.+
T Consensus 143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 3346999999999999988765 3688999999988654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=134.23 Aligned_cols=195 Identities=11% Similarity=0.022 Sum_probs=126.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++||||+|+||.+++++|+++|+.| .++.+|++|.+++.++++.. ++|
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVD 86 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999865 34678999999998888763 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+|+...... .+.........+++|+.++.++++++... +.++|++||...+.+
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 149 (247)
T PRK12935 87 ILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG----------------- 149 (247)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-----------------
Confidence 9999999752111 12233566788999999999999999742 347999998643321
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.+|...+.+...... +..+...++..+.+... ........ . ........+.|
T Consensus 150 ~~-~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~-~~~~~~~~----~-~~~~~~~~~~~-------- 214 (247)
T PRK12935 150 GF-GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMV-AEVPEEVR----Q-KIVAKIPKKRF-------- 214 (247)
T ss_pred CC-CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhh-hhccHHHH----H-HHHHhCCCCCC--------
Confidence 11 456899999988877322211 22333333332211100 00000000 0 00011112234
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPG 607 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~ 607 (684)
.|++|++++++.+++.. .+..||+.++.
T Consensus 215 ---------~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 215 ---------GQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred ---------cCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 99999999999998754 34589988763
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.5e-13 Score=134.79 Aligned_cols=126 Identities=17% Similarity=0.082 Sum_probs=95.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+.|.+.+..+++.. ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999876 35678999999988888754 5899
Q ss_pred EEEcceecCCCCcc-c-cccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPNVD-W-CESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~~~-~-~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+||....+... . ..+.....+++|+.++.++++.+.. ...++|++||...+.+.
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------- 144 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV----------------- 144 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------------
Confidence 99999865211111 1 1233456799999999999999863 23469999998766311
Q ss_pred CCCCChhhhhhHhHhhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~ 515 (684)
. +...|+.+|...|.+..
T Consensus 145 ~-~~~~Y~~sK~~~~~~~~ 162 (263)
T PRK06181 145 P-TRSGYAASKHALHGFFD 162 (263)
T ss_pred C-CccHHHHHHHHHHHHHH
Confidence 1 44689999999987743
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.2e-12 Score=123.43 Aligned_cols=207 Identities=16% Similarity=0.162 Sum_probs=138.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~Vi 91 (684)
|+|+||||+|+||++++++|+++++++.|+...|.... .....++.++++|+.+.+.+..+.+. .++|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--------ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999999666788777774321 11134678899999999887765432 4799999
Q ss_pred EcCccCCcCC----------CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 92 HFAAQTHVDN----------SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 92 h~a~~~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
|+||...... ..+.....+.+|+.++..+.+++... ....+++++||.. +.... .+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~---------~~ 141 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD---------NR 141 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc---------CC
Confidence 9999764210 11123356788888888777776542 1246899998732 11100 01
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|+..+.+.+.++.+ .++++..+.||.+..+... .. .... + ...++.
T Consensus 142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~--~~--------~~~~--~-------~~~~~~ 202 (235)
T PRK09009 142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK--PF--------QQNV--P-------KGKLFT 202 (235)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc--ch--------hhcc--c-------cCCCCC
Confidence 223457999999999999888755 3677888999988765321 10 0111 1 112467
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEec
Q 035631 234 CADVAEAFDVILHRGV---IGHVYNVG 257 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~---~~~~~ni~ 257 (684)
.+|+|+++..++.... .+..+.+.
T Consensus 203 ~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 203 PEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred HHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 8999999999997642 34444443
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.9e-13 Score=133.94 Aligned_cols=210 Identities=13% Similarity=0.067 Sum_probs=132.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..++... ++|+||
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV 82 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 489999999999999999999999765 45689999999998887764 579999
Q ss_pred EcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||....... ...........++|+.++.++++++.. .+. ++|++||...+. + +
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~------~-------- 143 (257)
T PRK07074 83 ANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-----A------L-------- 143 (257)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-----C------C--------
Confidence 99996521111 111222345577999999999998853 333 599998863321 0 0
Q ss_pred CCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
....|+.+|...+.+...... +..+...++..+.+........ . ...+...... .
T Consensus 144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~----------~~~~~~~~~~----~ 203 (257)
T PRK07074 144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------A----------NPQVFEELKK----W 203 (257)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------c----------ChHHHHHHHh----c
Confidence 123699999999877433222 2223333333222111000000 0 0011000000 0
Q ss_pred ccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCCcccHHHHHHHHHh
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVISHNEILELYKE 620 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~s~~e~~~~i~~ 620 (684)
..-..++|++|++++++.++... ..| .+++.++...+..|+++.+..
T Consensus 204 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 204 YPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 00124499999999999999653 334 778888888899999988754
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-13 Score=132.58 Aligned_cols=198 Identities=11% Similarity=0.045 Sum_probs=125.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD 84 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999875 24568999999998888764 589
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CC-eEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+.........+++|+.++.++++++... +. ++|++||...+. +
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------~ 147 (250)
T PRK08063 85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------------Y 147 (250)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------------C
Confidence 9999998652111 11222333456889999999999999853 22 699999874432 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.+|...|.+...... +..+...++..+....... +. ....+..... ..
T Consensus 148 ~~-~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~-~~----------------~~~~~~~~~~-~~ 208 (250)
T PRK08063 148 LE-NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH-FP----------------NREELLEDAR-AK 208 (250)
T ss_pred CC-CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh-cc----------------CchHHHHHHh-cC
Confidence 11 446899999999988433222 2233333333222211100 00 0001100000 00
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
.....+++.+|++++++.++..+ .+..+++.++..
T Consensus 209 ---~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 209 ---TPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred ---CCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 00113499999999999998754 244778776643
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-13 Score=134.28 Aligned_cols=201 Identities=14% Similarity=0.059 Sum_probs=128.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 89 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPID 89 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999999999999876 34567999999999888764 479
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+...+.....+++|+.++.++++++.+. + .++|++||...+. +
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------------~ 152 (255)
T PRK07523 90 ILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------------A 152 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------------C
Confidence 9999999652111 11223344677889999999999999853 2 3699999874331 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHH-----hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLE-----IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. ....|+.+|...+.+.... ..+..+...++..+.++...... .. ..+ ...+...
T Consensus 153 ~~-~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~--------------~~---~~~-~~~~~~~ 213 (255)
T PRK07523 153 RP-GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV--------------AD---PEF-SAWLEKR 213 (255)
T ss_pred CC-CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc--------------cC---HHH-HHHHHhc
Confidence 11 4468999999998774332 22333343444433221110000 00 001 0000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCCccc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVIS 610 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~s 610 (684)
. ....+.+.+|++++++.++... ..| .+++.++..+|
T Consensus 214 --~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 214 --T-PAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred --C-CCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 0 0123488999999999998753 234 88888776544
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.7e-13 Score=133.56 Aligned_cols=201 Identities=14% Similarity=0.091 Sum_probs=125.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++||||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999865 35667999998888777653 68
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecce-eeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGC-IYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~-vy~~~~~~~~~~~~~~~e 492 (684)
|+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||.. .++
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~--------------- 147 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG--------------- 147 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC---------------
Confidence 99999998662211 1222344567789999999888887764 34 3699998864 232
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhH---H--hhhhhhhhhhhhhhhHHHH-HHhhhhhhcc-ccc----cceecCCCCCch
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYL---E--IFVLVICIECLINFQVEGL-LKAYENVCTL-RLR----MPISSDLSNPRN 561 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~---~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~----~~~~g~~~~~~~ 561 (684)
.. ....|+.+|+..+.+... + ..+..+...++..+..... ...+...... ... ...+.+....+
T Consensus 148 ---~~-~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (259)
T PRK12384 148 ---SK-HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLK- 222 (259)
T ss_pred ---CC-CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCccc-
Confidence 01 335799999998877322 1 2334444444443221111 1111110000 000 00011111222
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
.+++.+|++++++.++.+. . +..|++.+++.
T Consensus 223 ----------------~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 223 ----------------RGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred ----------------CCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 3499999999999988654 2 34799988754
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.1e-13 Score=132.10 Aligned_cols=215 Identities=18% Similarity=0.142 Sum_probs=142.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....+++++++|+.+.+.+.++++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNEN--KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 35679999999999999999999999 899999999642 2211111 01123578899999999888766532
Q ss_pred -CCCCEEEEcCccCCcCCC--CCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNS--FGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
..+|.+||+++....... .+.....++.|+.+...+++.+... ....++|++||...... +..
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------~~~ 145 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-------------ASP 145 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-------------CCC
Confidence 247999999985432111 1223456788888888777776542 11258999998644210 112
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
+...|+.+|...+.+++.+..+ .+++++++||++++++.... . . ... .. ..+ ..++..+|+
T Consensus 146 ~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~---~-~~~------~~--~~~---~~~~~~~~v 209 (238)
T PRK05786 146 DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-R---N-WKK------LR--KLG---DDMAPPEDF 209 (238)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-h---h-hhh------hc--ccc---CCCCCHHHH
Confidence 3456999999999888777655 38999999999999874211 0 0 000 00 000 134677999
Q ss_pred HHHHHHHHhcCC---CCcEEEec
Q 035631 238 AEAFDVILHRGV---IGHVYNVG 257 (684)
Q Consensus 238 a~~i~~~~~~~~---~~~~~ni~ 257 (684)
++++..++..+. .+..+.+.
T Consensus 210 a~~~~~~~~~~~~~~~g~~~~~~ 232 (238)
T PRK05786 210 AKVIIWLLTDEADWVDGVVIPVD 232 (238)
T ss_pred HHHHHHHhcccccCccCCEEEEC
Confidence 999999986532 34555554
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.2e-12 Score=126.07 Aligned_cols=224 Identities=13% Similarity=0.064 Sum_probs=144.5
Q ss_pred CCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcc-cccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYC-SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++++||||+ +-||.++++.|+++ |++|++.+|+... .....+.......++..+.+|+.|.+++..++..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 45899999997 89999999999999 8999998875321 1122221111124677889999999987766532
Q ss_pred --CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+||.... +...+.....+++|+.++..+.+++... ....++|++||....-
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---------- 153 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER---------- 153 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------
Confidence 368999999996431 1122234456788999888877776542 1136899999864421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............ + ...
T Consensus 154 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r 220 (257)
T PRK08594 154 ----VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA--P-------LRR 220 (257)
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcC--C-------ccc
Confidence 1112346999999999999888765 37999999999886542100000001111111111 1 113
Q ss_pred cccHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
+...+|++++++.++.... .+..+.+.++
T Consensus 221 ~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 221 TTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred cCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 4678999999999886432 4566666544
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.6e-12 Score=124.67 Aligned_cols=223 Identities=15% Similarity=0.072 Sum_probs=143.9
Q ss_pred CCCEEEEEcC--CchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGA--AGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGa--tG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++|||| ++-||.++++.|+++ |++|++.+|+......+.+... ....+.++.+|+.|.+++.+++..
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKR-LPEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHh-cCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 4589999999 899999999999999 8999999875321111211111 122567899999999987766532
Q ss_pred -CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||.... ...+++....+++|+.++..+.+++... ..-.++|++|+....
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------------ 150 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------------ 150 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc------------
Confidence 469999999997532 1122344457899999988888776532 112578888753211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............ ++ .+.+
T Consensus 151 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~------~~~~ 219 (256)
T PRK07889 151 ---AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERA--PL------GWDV 219 (256)
T ss_pred ---cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcC--cc------cccc
Confidence 1112346899999999998877665 47899999999886652110000011111111111 11 0134
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+|+|++++.++... ..++++.+.++
T Consensus 220 ~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 220 KDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred CCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 67899999999998753 24566666544
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1e-12 Score=131.08 Aligned_cols=147 Identities=14% Similarity=0.038 Sum_probs=107.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++|
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d 84 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD 84 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence 4689999999999999999999999876 35778999999998877654 689
Q ss_pred eEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||.... +..+...+.....+++|+.++..+++++... +.++|++||...+. +
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------------~ 147 (258)
T PRK07890 85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----------------S 147 (258)
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----------------C
Confidence 99999986421 1112334566788999999999999999753 23699999975442 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEG 535 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~ 535 (684)
.. +...|+.+|...+.+..... .+..+...++.++.++.
T Consensus 148 ~~-~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 148 QP-KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred CC-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 11 44689999999987743322 23445555555554443
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.4e-12 Score=129.96 Aligned_cols=222 Identities=18% Similarity=0.123 Sum_probs=144.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc-------cccccCCCC--CCCCCceEEEecCCCHHHHHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-------SSLKNLHPS--RASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-------~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
+.++++|||||++.||+++++.|++. |++|++++|+.+. .....+... .....+.++.+|+.|.+++..
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 45689999999999999999999999 8999998875310 111111000 112356788999999888776
Q ss_pred hhcc-----CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cC-----CCcEEEEEeCcccc
Q 035631 81 LLVS-----EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TG-----QVKRFIHVSTDEVY 142 (684)
Q Consensus 81 ~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-----~~~~~i~~SS~~vy 142 (684)
++.. ..+|++||+||.... ....+++...+++|+.++..+.+++.. .. ...++|++||...+
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 161 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL 161 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence 6532 378999999997542 122344567889999999888877642 11 02589999996543
Q ss_pred cCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCce
Q 035631 143 GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQL 219 (684)
Q Consensus 143 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 219 (684)
... .....|+.+|...+.+.+.++.+ +++++..+.|+ +..+ .............+
T Consensus 162 ~~~--------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~------~~~~~~~~~~~~~~- 219 (286)
T PRK07791 162 QGS--------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR------MTETVFAEMMAKPE- 219 (286)
T ss_pred cCC--------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC------cchhhHHHHHhcCc-
Confidence 211 12346999999999998887665 48999999997 4221 11111111111110
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
. ....+...+|+|++++.++... ..++.+.+.++..
T Consensus 220 ----~--~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~ 258 (286)
T PRK07791 220 ----E--GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI 258 (286)
T ss_pred ----c--cccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence 0 1113467899999999988642 3566777765543
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.3e-13 Score=134.37 Aligned_cols=125 Identities=19% Similarity=0.184 Sum_probs=97.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
|++|||||+|+||.+++++|+++|++| .++.+|++|.+.+.++++.. ++|
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD 126 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLD 126 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999865 35678999999998887753 689
Q ss_pred eEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+|||+|+.... +..+...+.....+++|+.++.++++++... +.++|++||...|.+..
T Consensus 127 ~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~---------------- 190 (290)
T PRK06701 127 ILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE---------------- 190 (290)
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC----------------
Confidence 99999996421 1112233455678999999999999999863 34799999987774211
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 191 --~~~~Y~~sK~a~~~l~ 206 (290)
T PRK06701 191 --TLIDYSATKGAIHAFT 206 (290)
T ss_pred --CcchhHHHHHHHHHHH
Confidence 2246999999998773
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.7e-13 Score=131.84 Aligned_cols=199 Identities=13% Similarity=0.069 Sum_probs=125.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+.|++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ +
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 44689999999999999999999999765 34678999999998887753 4
Q ss_pred CCeEEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHHcC-----CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 420 PTHVLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKEKN-----VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 420 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+|+|||+||.... +..+...+.....+++|+.++.++++++.... .++|++||...+.
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~---------------- 151 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN---------------- 151 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----------------
Confidence 7999999986521 11122345567889999999999999988631 2577776653332
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhhhh----hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIFVL----VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
+......|+.+|...|.+........ .+...++..+.+. .......| ...+..
T Consensus 152 --~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~--------------------~~~~~~~~-~~~~~~ 208 (258)
T PRK09134 152 --LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS--------------------GRQSPEDF-ARQHAA 208 (258)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC--------------------cccChHHH-HHHHhc
Confidence 11022479999999987743322211 1212222211000 00000011 111100
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC-ccc-eeEecCCCcccH
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN-CRG-AWNFTNPGVISH 611 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g-~~ni~~~~~~s~ 611 (684)
.. .....+++|+|++++.+++++ .+| .|++.++..+++
T Consensus 209 ---~~-~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 209 ---TP-LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred ---CC-CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence 00 112378999999999999866 344 788877765554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=133.37 Aligned_cols=184 Identities=14% Similarity=0.130 Sum_probs=125.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCC-C-CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHP-S-RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
|+++++||||++.||.++++.|+++ | ++|++++|+... ...+.. . .....+.++.+|+.+.+++..++..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLK--AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5679999999999999999999999 8 999999986421 111110 0 1124577889999999887766532
Q ss_pred --CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHH----hcC-CCcEEEEEeCcccccCCCC----C
Q 035631 85 --EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACK----LTG-QVKRFIHVSTDEVYGETDM----E 148 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~~i~~SS~~vyg~~~~----~ 148 (684)
.++|++||+||..... .+.+.....+++|+.++..+.+++. +.+ ...++|++||...+..... .
T Consensus 78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~ 157 (314)
T TIGR01289 78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP 157 (314)
T ss_pred hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC
Confidence 3699999999974321 1223455678999999877766553 322 1369999999876532110 0
Q ss_pred C-CCC--------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 035631 149 S-DIG--------------NPEASQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGP 198 (684)
Q Consensus 149 ~-~~~--------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 198 (684)
. ... ..+..+..+...|+.||++...+.+.+.++ .++.++.++||+|...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T 226 (314)
T TIGR01289 158 KANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADT 226 (314)
T ss_pred cccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCC
Confidence 0 000 011123345567999999988887777654 3688999999998643
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=130.78 Aligned_cols=209 Identities=13% Similarity=0.078 Sum_probs=129.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34689999999999999999999999976 34678999999988887653 6799
Q ss_pred EEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHHH----cCC--eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 423 VLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCKE----KNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 423 Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|||+||..... ......+.....+++|+.++.++++++.. .+. +++++||.....+
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~---------------- 153 (264)
T PRK12829 90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG---------------- 153 (264)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC----------------
Confidence 99999965111 11233455678899999999999998853 333 3666666432210
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.. +...|+.+|...|.+..... .+..+...++.++.+............. .... ...+.......
T Consensus 154 -~~-~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~ 223 (264)
T PRK12829 154 -YP-GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQ-LGIG-------LDEMEQEYLEK 223 (264)
T ss_pred -CC-CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhc-cCCC-------hhHHHHHHHhc
Confidence 01 33579999999987743322 2344555566655443322221110000 0000 00110000000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
. ....+++++|+++++..++... .+..|++.++..
T Consensus 224 ---~-~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 224 ---I-SLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred ---C-CCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 0 0124599999999999888642 234888887653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.1e-13 Score=132.10 Aligned_cols=125 Identities=16% Similarity=0.152 Sum_probs=96.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+.|.+++..+++.. ++|+|
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 85 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL 85 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999876 27889999999999888765 68999
Q ss_pred EEcceecCCCC--ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRPN--VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+|+...... .+...+.....+++|+.++..+++.+.. .+ .++|++||...+.+ .
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~ 148 (251)
T PRK07231 86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-----------------R 148 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-----------------C
Confidence 99998642111 1223455667899999998888888774 33 36999999866531 1
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 149 ~-~~~~y~~sk~~~~~~~ 165 (251)
T PRK07231 149 P-GLGWYNASKGAVITLT 165 (251)
T ss_pred C-CchHHHHHHHHHHHHH
Confidence 1 4467999999888763
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.4e-13 Score=118.54 Aligned_cols=282 Identities=14% Similarity=0.059 Sum_probs=180.0
Q ss_pred CCEEEEEcCCchhHHHHHH-----HHHhcC--CCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 12 PKKILITGAAGFIGSHVTN-----RLIKNY--PDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~-----~L~~~~--~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
..+.++-+++|+|+..|.. ++-+.+ ..|.|.+++|.+... ++.+.+.|..-..
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~------------ritw~el~~~Gip-------- 71 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA------------RITWPELDFPGIP-------- 71 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc------------ccccchhcCCCCc--------
Confidence 3567888999999988877 333331 248999999975321 2222222211100
Q ss_pred CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLTGQ-VKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
..++..+++++.... ..+++-..+.....+..++.|+++..++.. .+.+|.+|..++|-.... ..++|.++.
T Consensus 72 ~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s---~eY~e~~~~ 148 (315)
T KOG3019|consen 72 ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSES---QEYSEKIVH 148 (315)
T ss_pred eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccc---ccccccccc
Confidence 144555555553221 111111223334445567788888887653 347999999999976543 234777777
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
...+.......+-|..++... .+.+.+++|.|.|.|.+. ..+..++--.+-+---+ .++|.++++|||++|++.
T Consensus 149 qgfd~~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gG---Ga~~~M~lpF~~g~GGP-lGsG~Q~fpWIHv~DL~~ 222 (315)
T KOG3019|consen 149 QGFDILSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGG---GALAMMILPFQMGAGGP-LGSGQQWFPWIHVDDLVN 222 (315)
T ss_pred CChHHHHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCC---cchhhhhhhhhhccCCc-CCCCCeeeeeeehHHHHH
Confidence 777777766666666665433 258899999999999875 22333332222222222 378999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc-CCCC--CCcceec-----CHHHHHhcCCccc
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ-DRPF--NDHRYFL-----DDQKLKRLGWKEK 311 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~-~~~~--~~~~~~~-----d~~k~~~lg~~p~ 311 (684)
.+..+++++.-.++.|-+.+++.+..|+.+.+.++++...-..+...- ...+ ......+ -..|+.++||+.+
T Consensus 223 li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~ 302 (315)
T KOG3019|consen 223 LIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFK 302 (315)
T ss_pred HHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceee
Confidence 999999998777799999999999999999999999876432222110 0011 1112222 3456677999988
Q ss_pred CC-HHHHHHHHH
Q 035631 312 TP-WEEGLKLTL 322 (684)
Q Consensus 312 ~~-~~e~i~~~i 322 (684)
++ +.++++++.
T Consensus 303 yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 303 YPYVKDALRAIM 314 (315)
T ss_pred chHHHHHHHHHh
Confidence 76 677777653
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-13 Score=130.49 Aligned_cols=202 Identities=16% Similarity=0.115 Sum_probs=134.8
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|+|+||||.+|+.+++.|++.+++| +.+.+|..|.+++.++|+++ |.||.+.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--d~v~~~~~~~--- 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGV--DAVFSVTPPS--- 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTC--SEEEEESSCS---
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCC--ceEEeecCcc---
Confidence 7999999999999999999999977 57788999999999999999 9999877633
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecce-eeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
+ ........+++++|.+.+++.+..||.. .+ .+..... |....-..|...|+
T Consensus 76 ~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~--------------~~~~~~~-p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 76 H------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADY--------------DESSGSE-PEIPHFDQKAEIEE 128 (233)
T ss_dssp C------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGT--------------TTTTTST-THHHHHHHHHHHHH
T ss_pred h------------hhhhhhhhhHHHhhhccccceEEEEEecccc--------------ccccccc-ccchhhhhhhhhhh
Confidence 1 1223346789999999999755566642 11 1111122 44445567887776
Q ss_pred hhhHHhhhhhhhhhhhhhhhHHHHHHhhhhh--hccc-cccceecCCCCCchHHHHhhhcccccccCCCcc-chhhHHHH
Q 035631 513 LSYLEIFVLVICIECLINFQVEGLLKAYENV--CTLR-LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMT-VLDEMLPI 588 (684)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~~~~ 588 (684)
..... +.+.++.++.++. +......... .... ....+.+++.....+ + ..+|++++
T Consensus 129 ~l~~~--~i~~t~i~~g~f~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~Dvg~~ 188 (233)
T PF05368_consen 129 YLRES--GIPYTIIRPGFFM-ENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVP-----------------VTDTRDVGRA 188 (233)
T ss_dssp HHHHC--TSEBEEEEE-EEH-HHHHTTTHHTTCSCCTSSEEEEETTSTSEEEE-----------------EEHHHHHHHH
T ss_pred hhhhc--cccceeccccchh-hhhhhhhcccccccccceEEEEccCCCccccc-----------------cccHHHHHHH
Confidence 54333 5556666666444 2222211211 1111 123455565554455 5 99999999
Q ss_pred HHHHHhcC--c-cc-eeEecCCCcccHHHHHHHHHhhcCCcccc
Q 035631 589 AIEMARRN--C-RG-AWNFTNPGVISHNEILELYKEYIDPQLKW 628 (684)
Q Consensus 589 ~~~~~~~~--~-~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 628 (684)
+..++..+ . .+ .+.+++ +.+|.+|+++.+.+.+|+++++
T Consensus 189 va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y 231 (233)
T PF05368_consen 189 VAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKY 231 (233)
T ss_dssp HHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEE
Confidence 99999876 2 23 666655 8899999999999999987654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.4e-13 Score=130.99 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=94.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999865 46788999999988887653 479
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+|+....... +.........+++|+.++.++++++.. .+ .++|++||...+.+..
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~--------------- 147 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS--------------- 147 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC---------------
Confidence 99999986421111 112233456799999999999888863 33 3699999987764221
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|.+.+.+.
T Consensus 148 ---~~~~Y~~sK~a~~~~~ 163 (250)
T TIGR03206 148 ---GEAVYAACKGGLVAFS 163 (250)
T ss_pred ---CCchHHHHHHHHHHHH
Confidence 2357999998887663
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.3e-13 Score=131.56 Aligned_cols=196 Identities=14% Similarity=0.059 Sum_probs=124.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++|+||||||+|+||.+++++|+++|++| .++.+|+.|.+++..++++. .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999976 35568999999988887753 57
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||....... ....+.....++.|+.++.++++++.. .+. ++|++||.....
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----------------- 146 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----------------- 146 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------------
Confidence 999999987522111 122334567789999999999999853 343 699999874321
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
... +...|+.+|...+.+...... +..+...++..+.++.... +. .++.+...
T Consensus 147 ~~~-~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~-------------------~~~~~~~~- 204 (246)
T PRK05653 147 GNP-GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LP-------------------EEVKAEIL- 204 (246)
T ss_pred CCC-CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hh-------------------HHHHHHHH-
Confidence 111 456799999988876333221 2233333333222111100 00 00000000
Q ss_pred ccccccC-CCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 570 NKVVNIP-NSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 570 ~~~~~~~-~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
...+ ..+++.+|+++++..++... .+..|++.+|.
T Consensus 205 ---~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 205 ---KEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred ---hcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 0001 23488999999999998753 23488887764
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.9e-13 Score=131.11 Aligned_cols=127 Identities=18% Similarity=0.197 Sum_probs=95.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.++++||||+|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|+||
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 89 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALV 89 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3589999999999999999999999866 35678999999887665543 589999
Q ss_pred EcceecCCC---CccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRP---NVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||..... ..+...+.....+++|+.++.++++++.. .+.++|++||...+.+..
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------------- 152 (255)
T PRK05717 90 CNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------------- 152 (255)
T ss_pred ECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC-----------------
Confidence 999965211 11123345568899999999999999974 234689998875442110
Q ss_pred CCCChhhhhhHhHhhhhh
Q 035631 498 FTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~ 515 (684)
..+.|+.+|...+.+..
T Consensus 153 -~~~~Y~~sKaa~~~~~~ 169 (255)
T PRK05717 153 -DTEAYAASKGGLLALTH 169 (255)
T ss_pred -CCcchHHHHHHHHHHHH
Confidence 23579999999987743
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.9e-12 Score=126.57 Aligned_cols=223 Identities=15% Similarity=0.045 Sum_probs=144.8
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcc-cccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYC-SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+|++|||||+ +-||+++++.|+++ |++|++.+|+... .....+.... ... ..+.+|+.|.+++..++..
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHH
Confidence 346899999997 79999999999999 8999999886321 1111111111 112 5788999999987766532
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|++||+||.... +...++....+++|+.++..+.+++... ..-.++|++||.....
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~--------- 149 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK--------- 149 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc---------
Confidence 368999999997431 1222345568899999998888777542 1126899999854321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||++..+......-.......... ..+. .
T Consensus 150 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~pl-------~ 215 (274)
T PRK08415 150 -----YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEI--NAPL-------K 215 (274)
T ss_pred -----CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhh--hCch-------h
Confidence 1112346999999999999888765 478899999998866421000000000000000 1111 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|+|+++..++... ..++.+.+.+|
T Consensus 216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG 248 (274)
T PRK08415 216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248 (274)
T ss_pred ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence 2467899999999998642 35666777655
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-11 Score=120.73 Aligned_cols=190 Identities=15% Similarity=0.091 Sum_probs=124.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.+++++++||||+|+||+++++.|+++ |++|++++|+... .... .. ......+.+|+.|.+++...+ .++|
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~-~~~~---~~-~~~~~~~~~D~~~~~~~~~~~--~~iD 81 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKIN-NSES---ND-ESPNEWIKWECGKEESLDKQL--ASLD 81 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchh-hhhh---hc-cCCCeEEEeeCCCHHHHHHhc--CCCC
Confidence 345689999999999999999999999 8999999986411 1110 01 112357789999999988877 5799
Q ss_pred EEEEcCccCCc-CCCCCChHHHHHHHHHHHHHHHHHHHhc------CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHV-DNSFGNSFEFTNNNIYGTHVLLEACKLT------GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 89 ~Vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
++||+||.... ....+++...+++|+.++.++++++... +.-..++..||...+. + ..
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--------------~-~~ 146 (245)
T PRK12367 82 VLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--------------P-AL 146 (245)
T ss_pred EEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--------------C-CC
Confidence 99999997432 2223456778899999999999887542 1112344444433221 1 12
Q ss_pred CChhHHHHHHHHHHH---HHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 162 TNPYSATKAGAEMLV---MAYHR---SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~---~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
...|+.||+..+.+. ++... ..++.+..+.|+.+..+ + .+ ...+..+
T Consensus 147 ~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~------~-----------~~----------~~~~~~~ 199 (245)
T PRK12367 147 SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSE------L-----------NP----------IGIMSAD 199 (245)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccc------c-----------Cc----------cCCCCHH
Confidence 346999999975433 22211 23566666666653211 0 00 0136789
Q ss_pred HHHHHHHHHHhcCC
Q 035631 236 DVAEAFDVILHRGV 249 (684)
Q Consensus 236 D~a~~i~~~~~~~~ 249 (684)
|+|+.++.++.+..
T Consensus 200 ~vA~~i~~~~~~~~ 213 (245)
T PRK12367 200 FVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999987543
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=130.07 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=96.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------------eeeeccCCChhHHHHHHHh----
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------------EFGTGRLEDKNSLLDDMKR---- 417 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~d~~d~~~~~~~~~~---- 417 (684)
+.|+++||||+|+||.+++++|+++|++| .++.+|+.|.+++..+++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45799999999999999999999999876 2466899999988887754
Q ss_pred -cCCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH-----HcC-CeEEEEecceeeecCCCCCCCCCCC
Q 035631 418 -VRPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK-----EKN-VLLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 418 -~~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
.++|+|||+||...... .+.........+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 154 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---------- 154 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC----------
Confidence 25799999999762111 122334556788999999999999998 333 369999997655311
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 155 -------~-~~~~y~~sK~a~~~~~ 171 (249)
T PRK12827 155 -------R-GQVNYAASKAGLIGLT 171 (249)
T ss_pred -------C-CCchhHHHHHHHHHHH
Confidence 1 4467999999888763
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-11 Score=123.00 Aligned_cols=223 Identities=14% Similarity=0.093 Sum_probs=143.8
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcc-cccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYC-SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++++||||++ -||+++++.|+++ |++|++.+|+... .....+... .+....+.+|+.|.+++..++..
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhc--cCCceEeecCCCCHHHHHHHHHHHH
Confidence 4568999999985 8999999999999 8999988875311 111122111 13456788999999988876632
Q ss_pred ---CCCCEEEEcCccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
..+|++||+||..... ...+.....+++|+.++..+.+++... ..-.++|++||.....
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-------- 151 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-------- 151 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC--------
Confidence 2589999999964321 112234456788998888777776432 1126899999865321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
+......|+.+|...+.+.+..+.+ +++++..+.||.+--+......-............+.
T Consensus 152 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 216 (262)
T PRK07984 152 ------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------- 216 (262)
T ss_pred ------CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------
Confidence 1112346999999999999888765 4789999999988653110000011111111111111
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|++.++..++... ..+..+.+.++
T Consensus 217 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 217 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred cCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 13467899999999998653 24566666554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.3e-12 Score=124.88 Aligned_cols=222 Identities=14% Similarity=0.061 Sum_probs=145.0
Q ss_pred CCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.++.+|||||++ -||+++++.|+++ |++|++.+|+.... ....+... ......+++|+.|.+++..++..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~--~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAES--LGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHh--cCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 457899999997 9999999999999 89999998863211 11111111 01234688999999887766532
Q ss_pred --CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|++||+||.... ....+++...+++|+.++.++++++... ..-.++|++||......
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~--------- 152 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV--------- 152 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc---------
Confidence 379999999996531 1223445667899999998888776531 11268999998643211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............ ++ .-
T Consensus 153 -----~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~--p~-------~r 218 (271)
T PRK06505 153 -----MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNS--PL-------RR 218 (271)
T ss_pred -----CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcC--Cc-------cc
Confidence 112346999999999999888766 37999999999987653210000011111111111 11 12
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|++++.++... ..++.+.+.++
T Consensus 219 ~~~peeva~~~~fL~s~~~~~itG~~i~vdgG 250 (271)
T PRK06505 219 TVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG 250 (271)
T ss_pred cCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence 456899999999998643 24566676655
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.5e-13 Score=139.84 Aligned_cols=203 Identities=13% Similarity=0.010 Sum_probs=129.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe---------------------------------eeeccCCChhHHHHHHHhc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------------------FGTGRLEDKNSLLDDMKRV 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------------------~~~~d~~d~~~~~~~~~~~ 418 (684)
.+||||||+|+||.+++++|+++|++|. ++.+|+.|.+.+...+.++
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggi 160 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNA 160 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCC
Confidence 3799999999999999999999998761 3578999999998888877
Q ss_pred CCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 419 RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+|||++|.. .. ...+....+++|+.|+.+++++|.+.++ +||++||.+++... ..+. ..+
T Consensus 161 --DiVVn~AG~~---~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----------~p~~-~~~ 222 (576)
T PLN03209 161 --SVVICCIGAS---EK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----------FPAA-ILN 222 (576)
T ss_pred --CEEEEccccc---cc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----------cccc-chh
Confidence 9999999854 11 1123456788999999999999999886 69999998653110 0000 112
Q ss_pred CCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 498 FTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
....|...|..+|+.+. ..++.+.+.|+..+.+.. ..... ... +...........+
T Consensus 223 -sk~~~~~~KraaE~~L~--~sGIrvTIVRPG~L~tp~--d~~~~--t~~--v~~~~~d~~~gr~--------------- 278 (576)
T PLN03209 223 -LFWGVLCWKRKAEEALI--ASGLPYTIVRPGGMERPT--DAYKE--THN--LTLSEEDTLFGGQ--------------- 278 (576)
T ss_pred -hHHHHHHHHHHHHHHHH--HcCCCEEEEECCeecCCc--ccccc--ccc--eeeccccccCCCc---------------
Confidence 33557777887776542 234555555555322110 00000 000 0010000111123
Q ss_pred CccchhhHHHHHHHHHhcC---ccceeEecCCCcccHHHHHHHH
Q 035631 578 SMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVISHNEILELY 618 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i 618 (684)
+..+|+|++++.++.++ ...+|.+.++.......+.+.+
T Consensus 279 --isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~ 320 (576)
T PLN03209 279 --VSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELL 320 (576)
T ss_pred --cCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHH
Confidence 88999999999998855 3458888876533333443433
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.3e-12 Score=126.99 Aligned_cols=223 Identities=15% Similarity=0.070 Sum_probs=145.3
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcccc----cccCCCCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCSS----LKNLHPSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
+++++++||||+ +-||++++++|+++ |++|++..|+..... ...+... ...+.++.+|+.|.+++..++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence 356889999986 79999999999999 899988765422111 1111111 1246688999999999876653
Q ss_pred c-----CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCC
Q 035631 84 S-----EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 84 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
. ..+|++||+||.... ....+.....+++|+.++..+.+++... ..-.++|++||.....
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~------ 153 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR------ 153 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc------
Confidence 2 369999999996431 1122345668899999998888876531 1126899999864321
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
+......|+.+|+..+.+.+.++.+. ++++..+.||.+-.+......-.+..........+
T Consensus 154 --------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p-------- 217 (258)
T PRK07370 154 --------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP-------- 217 (258)
T ss_pred --------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC--------
Confidence 11223569999999999998887664 78899999999866521000000111111111111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+...+|++.++..++... ..++.+.+.++
T Consensus 218 -~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 218 -LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred -cCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 113466799999999998643 24566766544
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=128.39 Aligned_cols=123 Identities=20% Similarity=0.152 Sum_probs=92.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 88 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVL 88 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 589999999999999999999999866 34668999988888777653 57999
Q ss_pred EEcceecC--CCCccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITG--RPNVDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+||... .+.......+....+++|+.++..+++.+. +.+. ++|++||...++ +
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~------------- 150 (260)
T PRK12823 89 INNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-----I------------- 150 (260)
T ss_pred EECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-----C-------------
Confidence 99998531 122233445566778899998886666555 3443 799999986553 0
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|...+.+.
T Consensus 151 --~~~~Y~~sK~a~~~~~ 166 (260)
T PRK12823 151 --NRVPYSAAKGGVNALT 166 (260)
T ss_pred --CCCccHHHHHHHHHHH
Confidence 2247999999999874
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-11 Score=121.98 Aligned_cols=218 Identities=15% Similarity=0.095 Sum_probs=141.6
Q ss_pred CCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcc---------cccccCCC--CCCCCCceEEEecCCCHHH
Q 035631 11 KPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYC---------SSLKNLHP--SRASPNFKFLKGDITCADL 77 (684)
Q Consensus 11 ~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~---------~~~~~l~~--~~~~~~~~~~~~Dl~d~~~ 77 (684)
.+++||||||+| .||++++++|+++ |.+|++..|.... .....+.. ......+.++++|+.+.++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 568999999995 7999999999999 8899887543110 00000000 0112357788999999988
Q ss_pred HHHhhcc-----CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccC
Q 035631 78 MNYLLVS-----EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 78 ~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~ 144 (684)
+.+++.. ..+|+|||+||.... ....+.....+++|+.++..+..++ ++.+ ..+||++||...+.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~- 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG- 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC-
Confidence 7766632 258999999996532 2222345567899999888875444 3322 46999999965431
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEE
Q 035631 145 TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 145 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 221 (684)
+..+...|+.+|+..+.+.+.++.+ ++++++.++||.+-.+... ...........+
T Consensus 161 -------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~--- 219 (256)
T PRK12859 161 -------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFP--- 219 (256)
T ss_pred -------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCC---
Confidence 2223467999999999998887655 4799999999988654321 111111111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+...+|+|+++..++... ..++.+.+.++
T Consensus 220 ------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 220 ------FGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred ------CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 012356799999999888643 24555555443
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-12 Score=134.85 Aligned_cols=227 Identities=15% Similarity=0.105 Sum_probs=148.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe------------------------------------------EeeeeccCCCh-
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA------------------------------------------FEFGTGRLEDK- 408 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~------------------------------------------v~~~~~d~~d~- 408 (684)
.+|+|||||||+|.-|++.|+.---+ |..+.||+++.
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~ 92 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD 92 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence 48999999999999999999865421 25667776533
Q ss_pred -----hHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-e-EEEEecceeeecC--
Q 035631 409 -----NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-L-LMNFATGCIYEYD-- 479 (684)
Q Consensus 409 -----~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~-~i~~SS~~vy~~~-- 479 (684)
..+..+.+.+ |+|||+||-+ .+ .+........|..||.++++.|++... + ++|+||..+-...
T Consensus 93 LGis~~D~~~l~~eV--~ivih~AAtv-----rF-de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~ 164 (467)
T KOG1221|consen 93 LGISESDLRTLADEV--NIVIHSAATV-----RF-DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH 164 (467)
T ss_pred cCCChHHHHHHHhcC--CEEEEeeeee-----cc-chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence 3334455555 9999999944 32 344557788999999999999999753 5 9999999765211
Q ss_pred -CC--CCCCCC----------CCCcc-----CCCCC--CCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHH--HH
Q 035631 480 -SM--HPQGSS----------IGFKE-----DDEPN--FTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEG--LL 537 (684)
Q Consensus 480 -~~--~~~~~~----------~~~~e-----~~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~--~~ 537 (684)
.+ .+..+. +++++ -++.. ...+-|..+|+++|++...+....++.+.|++.+..-. +.
T Consensus 165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~ 244 (467)
T KOG1221|consen 165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPF 244 (467)
T ss_pred ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCC
Confidence 01 111110 00111 00000 13467999999999999999999999999998664211 11
Q ss_pred Hhhhhhh--------ccccc--cceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHh-cC----c--cce
Q 035631 538 KAYENVC--------TLRLR--MPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMAR-RN----C--RGA 600 (684)
Q Consensus 538 ~~~~~~~--------~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~-~~----~--~g~ 600 (684)
+.-.... ..+.. -.+..+.+...++ |.+|.++.+++.+.- .. . ..+
T Consensus 245 pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adi-----------------IPvD~vvN~~ia~~~~~~~~~~~~~~~I 307 (467)
T KOG1221|consen 245 PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADI-----------------IPVDMVVNAMIASAWQHAGNSKEKTPPI 307 (467)
T ss_pred CCccccCCCCceEEEEeccceEEEEEEccccccce-----------------eeHHHHHHHHHHHHHHHhccCCCCCCcE
Confidence 1111111 11111 1223444444555 999999999997652 11 1 349
Q ss_pred eEecCCC--cccHHHHHHHHHhhcC
Q 035631 601 WNFTNPG--VISHNEILELYKEYID 623 (684)
Q Consensus 601 ~ni~~~~--~~s~~e~~~~i~~~~g 623 (684)
||++++. ++++.++++...+...
T Consensus 308 Y~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 308 YHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred EEecccccCcccHHHHHHHHHHhcc
Confidence 9999866 7999999998887764
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.9e-12 Score=124.49 Aligned_cols=223 Identities=15% Similarity=0.116 Sum_probs=142.2
Q ss_pred CCCCEEEEEcC--CchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGA--AGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGa--tG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.++++||||| ++.||+++++.|+++ |++|++..|..... ....+... ......+++|+.|.+++..++..
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAE--LDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhc--cCCceEEECCCCCHHHHHHHHHHHH
Confidence 35689999997 679999999999999 89999887642111 11122111 12345789999999998776532
Q ss_pred ---CCCCEEEEcCccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.++|++||+||..... ...+.....+++|+.++..+.+++... ....++|++||...+..
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~------ 153 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA------ 153 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC------
Confidence 3799999999975421 111223455688888887777665421 11268999998654311
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+......-............+ +
T Consensus 154 --------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~------ 217 (261)
T PRK08690 154 --------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP--L------ 217 (261)
T ss_pred --------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC--C------
Confidence 112356999999999988877654 489999999999865421000001121112211111 1
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|+|+++..++... ..++.+.+.+|
T Consensus 218 -~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG 251 (261)
T PRK08690 218 -RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGG 251 (261)
T ss_pred -CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence 13567899999999999753 24566666554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.2e-12 Score=136.38 Aligned_cols=219 Identities=23% Similarity=0.157 Sum_probs=145.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.++++|||||+|.||..+++.|.++ |++|+++++.........+.. .-+...+.+|+.|.+.+..++.. .
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVAN---RVGGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 4589999999999999999999999 899999988532222222111 11346788999999887776532 2
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG---QVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
++|+|||+||..... ...+.....+++|+.++.++.+++.... ...+||++||...+...
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------------- 350 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------------- 350 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-------------
Confidence 689999999975432 2234455678999999999999987632 13689999997654221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.....|+.+|...+.+++.++.+ .++++..+.||.+-.+... . ++.......... ..+ ....-.+
T Consensus 351 -~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~--~-~~~~~~~~~~~~-~~l-------~~~~~p~ 418 (450)
T PRK08261 351 -RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA--A-IPFATREAGRRM-NSL-------QQGGLPV 418 (450)
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh--c-cchhHHHHHhhc-CCc-------CCCCCHH
Confidence 12356999999888888777544 4889999999987432110 1 111111111100 000 1123457
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|+++++..++... ..++.+.+.++
T Consensus 419 dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 419 DVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred HHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 9999999888643 24677777654
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-12 Score=132.04 Aligned_cols=211 Identities=12% Similarity=0.034 Sum_probs=125.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++|+|||+|
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3589999999999999999999999976 46778999999998888754 679999999
Q ss_pred eecCCCC-ccccccchhhHhhhchhhhHHHH----HHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 428 GITGRPN-VDWCESHRVETIRTNVMGTLTLA----DVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 428 ~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|...... .+...+.....+++|+.++..++ ..+++.+. ++|++||...+.+ . + ...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~------------~---~~~ 144 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY---T------------P---LGA 144 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC---C------------C---Ccc
Confidence 9652111 12234566788999999855444 45555554 7999999643210 0 1 234
Q ss_pred hhhhhhHhHhhhhhH---H--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 502 FYSKTKAMVTFLSYL---E--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.|+.+|...+.+... + ..+..+...++..+.+.... ......... .. .....+........-......
T Consensus 145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~ 217 (273)
T PRK06182 145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD-IAADHLLKT----SG--NGAYAEQAQAVAASMRSTYGS 217 (273)
T ss_pred HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccch-hhhhhhccc----cc--ccchHHHHHHHHHHHHHhhcc
Confidence 799999999877322 2 22344444555444322110 000000000 00 000000000000000000011
Q ss_pred CCccchhhHHHHHHHHHhcC-ccceeEecCC
Q 035631 577 NSMTVLDEMLPIAIEMARRN-CRGAWNFTNP 606 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~ 606 (684)
..+.+.+|+|++++.++... ....|+++.+
T Consensus 218 ~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 218 GRLSDPSVIADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred ccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence 24589999999999999865 3457776553
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=130.10 Aligned_cols=128 Identities=14% Similarity=0.094 Sum_probs=98.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++||||||+|+||.+++++|.++|++| .++.+|++|.+++.++++.. ++|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4589999999999999999999999865 35678999999988877653 589
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+|||+||.......+...+.....+++|+.++.++++++.. .+ .++|++||..... +.
T Consensus 91 ~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~ 153 (255)
T PRK06113 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------------KN 153 (255)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------------CC
Confidence 99999997633233344456667799999999999999873 22 3799999975331 11
Q ss_pred CCCCChhhhhhHhHhhhhhH
Q 035631 497 NFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~ 516 (684)
. +...|+.+|...+.+...
T Consensus 154 ~-~~~~Y~~sK~a~~~~~~~ 172 (255)
T PRK06113 154 I-NMTSYASSKAAASHLVRN 172 (255)
T ss_pred C-CcchhHHHHHHHHHHHHH
Confidence 1 345799999999988544
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.8e-12 Score=124.66 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=146.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc-CC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS-EG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~ 86 (684)
.+++|+||||+|.||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.+.+++..++.. .+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDAD--ALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 4589999999999999999999999 889999998642 1111110 01134578899999999998887754 36
Q ss_pred CCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|++||++|..... ...++....+++|+.+...+.+++. +.+ ..++|++||..... +
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~--------------~ 146 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN--------------P 146 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC--------------C
Confidence 99999999965321 2223445678999999888888763 332 36899998853321 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH----------HHHHHHHHcCCceEEecCC
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI----------PKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 225 (684)
......|+.+|...+.+.+..+.+ .+++++.++||.+..+... ... .......... .+
T Consensus 147 ~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~----- 217 (259)
T PRK06125 147 DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAG--LP----- 217 (259)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhcc--CC-----
Confidence 222346899999999998877654 4789999999988665210 000 0000011000 11
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+...+|+|++++.++... ..+..+.+.++
T Consensus 218 --~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg 252 (259)
T PRK06125 218 --LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252 (259)
T ss_pred --cCCCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence 113567899999999988643 34566777655
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=129.42 Aligned_cols=126 Identities=15% Similarity=0.124 Sum_probs=96.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~ 431 (684)
++++|||++|+||.++++.|+++|++| .++.+|+++.+.+..+++.. ++|+|||+|+...
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~ 89 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIAS 89 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 589999999999999999999999876 35668999998888888753 4799999999652
Q ss_pred CCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 432 RPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 432 ~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
... .+.........+++|+.++.++++++.+. + .++|++||...+.+. . +...|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~-~~~~y~ 151 (245)
T PRK07060 90 LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----------------P-DHLAYC 151 (245)
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----------------C-CCcHhH
Confidence 111 12223455667889999999999998763 2 479999998655311 1 346799
Q ss_pred hhhHhHhhhhh
Q 035631 505 KTKAMVTFLSY 515 (684)
Q Consensus 505 ~sK~~~E~~~~ 515 (684)
.+|...|.+.+
T Consensus 152 ~sK~a~~~~~~ 162 (245)
T PRK07060 152 ASKAALDAITR 162 (245)
T ss_pred HHHHHHHHHHH
Confidence 99999998743
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=146.76 Aligned_cols=171 Identities=18% Similarity=0.153 Sum_probs=126.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+..+++|||||+|+||++++++|.++ |++|++++|+.. ....+.. .....++.++.+|+.|.+.+.+++..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEA--AAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 899999999742 1111111 01123678899999999988777643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|+|||+||..... ...++....+++|+.++.++.+++. +.+...++|++||.+.|....
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 460 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-------- 460 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC--------
Confidence 2589999999975432 2223455678899999999888754 323236999999988775322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGP 198 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 198 (684)
+...|+.+|++.+.+.+.++.+ ++++++.++||.+-.+
T Consensus 461 ------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 461 ------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 2357999999999988777654 4899999999988654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=129.67 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=95.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++++||||+|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 86 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD 86 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999865 45678999999998887653 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+.........++.|+.++.++++++... +.++|++||...+.+.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 150 (250)
T PRK12939 87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA---------------- 150 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC----------------
Confidence 9999999652111 12223445577889999999999998653 2279999997544211
Q ss_pred CCCCCChhhhhhHhHhhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~ 515 (684)
. ....|+.+|...|.+..
T Consensus 151 -~-~~~~y~~sK~~~~~~~~ 168 (250)
T PRK12939 151 -P-KLGAYVASKGAVIGMTR 168 (250)
T ss_pred -C-CcchHHHHHHHHHHHHH
Confidence 1 23579999999987743
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=129.31 Aligned_cols=125 Identities=19% Similarity=0.165 Sum_probs=94.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
++++||||+|+||.+|+++|+++|++| .++.+|++|.+++.++++.. ++|+|
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~v 85 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVL 85 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 489999999999999999999999865 45678999999998887754 68999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
||+|+...... ...........+++|+.++.++.+++. +.+. ++|++||...+.+. .
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------------~ 148 (252)
T PRK06138 86 VNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----------------R 148 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----------------C
Confidence 99999652111 112334456778999999988777764 3443 69999997543211 1
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|...+.+.
T Consensus 149 -~~~~Y~~sK~a~~~~~ 164 (252)
T PRK06138 149 -GRAAYVASKGAIASLT 164 (252)
T ss_pred -CccHHHHHHHHHHHHH
Confidence 3467999999998774
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-11 Score=123.17 Aligned_cols=224 Identities=14% Similarity=0.051 Sum_probs=146.8
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCc-ccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDY-CSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.++++|||||+ +-||.++++.|+++ |++|++..|+.. ......+.... .....+++|+.|.+++..++..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHH
Confidence 456899999997 89999999999999 899988877521 11122221111 2345689999999988776532
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|++||+||.... ....++....+++|+.++..+++++... ..-.++|++||.....
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~--------- 154 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK--------- 154 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc---------
Confidence 368999999997531 1223345678899999999999887642 1136899999854321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+..+......-........... .++ .
T Consensus 155 -----~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~ 220 (272)
T PRK08159 155 -----VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYN--APL-------R 220 (272)
T ss_pred -----CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhC--Ccc-------c
Confidence 1112356999999999999888765 3789999999988653210000000111111111 111 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+...+|+|++++.++... ..+..+.+.++.
T Consensus 221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred ccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence 2467899999999999743 245677777664
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.9e-12 Score=125.50 Aligned_cols=199 Identities=11% Similarity=0.065 Sum_probs=139.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--CCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--EGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~V 90 (684)
||++||||+|.||+++++.|+++ |++|++++|+.. +...+.. ..+++++++|+.+.+.+..++.. ..+|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRD--DLEVAAK---ELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH---hccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 47999999999999999999999 899999998642 1111111 11467889999999998877643 268999
Q ss_pred EEcCccCC----c-----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 91 MHFAAQTH----V-----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 91 ih~a~~~~----~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
||+|+... . ....++....+++|+.++.++++++... ....++|++||... .
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------------------~ 135 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------------------P 135 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------------C
Confidence 99998421 0 0123456678899999999999888642 11368999998530 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|+..+.+.+.++.+ +++++..+.||.+..+.. ... ... +.-..+|+
T Consensus 136 ~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~-~~~------------p~~~~~~i 192 (223)
T PRK05884 136 AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGL-SRT------------PPPVAAEI 192 (223)
T ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhc-cCC------------CCCCHHHH
Confidence 1246999999999999888765 478899999998754310 000 000 01267999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCC
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
++++..++... ..++++.+.+|
T Consensus 193 a~~~~~l~s~~~~~v~G~~i~vdgg 217 (223)
T PRK05884 193 ARLALFLTTPAARHITGQTLHVSHG 217 (223)
T ss_pred HHHHHHHcCchhhccCCcEEEeCCC
Confidence 99999988643 24566666544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=122.81 Aligned_cols=223 Identities=13% Similarity=0.026 Sum_probs=145.8
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.++++|||||+ +-||.+++++|+++ |++|++.+|+.... ....+... .....++.+|+.|.+++.+++..
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHHHHHHHHH
Confidence 356899999998 59999999999999 89999998864211 11111111 12345788999999887766532
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|++||+||.... +.+.++....+++|+.++..+.+++... ..-.++|++||.....
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~--------- 154 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK--------- 154 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence 368999999997431 1223445678899999999998877532 1125899999854321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............ +. .
T Consensus 155 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~ 220 (258)
T PRK07533 155 -----VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERA--PL-------R 220 (258)
T ss_pred -----CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcC--Cc-------C
Confidence 1112357999999999998887765 47899999999886642110000112222222111 11 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+...+|+|++++.++... ..++.+.+.++
T Consensus 221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred CCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 3467899999999998642 34566666544
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.8e-12 Score=129.11 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=94.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc------CCCeEEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV------RPTHVLN 425 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~------~~d~Vih 425 (684)
|+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+|||
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 34589999999999999999999999977 45678999999988877653 5899999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhh----hHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMG----TLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||....... +...+.....+++|+.| +..++..+.+.+. ++|++||...+. +.. +
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------------~~~-~ 144 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------------PMK-Y 144 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------------CCC-c
Confidence 9986621111 11223446789999999 5566666666654 799999874331 111 4
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...|.+.
T Consensus 145 ~~~Y~asK~a~~~~~ 159 (277)
T PRK05993 145 RGAYNASKFAIEGLS 159 (277)
T ss_pred cchHHHHHHHHHHHH
Confidence 568999999999873
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=122.57 Aligned_cols=222 Identities=15% Similarity=0.050 Sum_probs=144.0
Q ss_pred CCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcc-cccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYC-SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.++.++||||++ -||.++++.|.++ |++|+..+|+... .....+.... ....++++|+.|.+++..+++.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHHHHHHHHHH
Confidence 467899999997 7999999999999 8999988875311 1112221111 1224578999999987776632
Q ss_pred --CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
..+|++||+|+.... +...++....+++|+.++..+++++... ..-.++|++||.....
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~---------- 152 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK---------- 152 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----------
Confidence 369999999986431 1223345668899999999888876421 1126899999855421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............+ . ..
T Consensus 153 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~-------~r 219 (260)
T PRK06603 153 ----VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAP--L-------KR 219 (260)
T ss_pred ----CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCC--c-------CC
Confidence 1112346999999999998888765 478999999998865421000001111222221111 1 12
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|+++..++... ..++.+.+.++
T Consensus 220 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 220 NTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred CCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 467899999999999743 24566666554
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=129.88 Aligned_cols=136 Identities=17% Similarity=0.127 Sum_probs=95.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
.+++|||||+|+||.++++.|+++|++| .++.+|++|.+++..+++.. +
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 83 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGK 83 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999876 23578999999998888764 2
Q ss_pred CCeEEEcceecCC----CCccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCC
Q 035631 420 PTHVLNAAGITGR----PNVDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 420 ~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
+|+|||+|+.... +..+.........+++|+.++..+++++.. .+. ++|++||...+..... . .
T Consensus 84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~------~ 156 (256)
T PRK09186 84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-E------I 156 (256)
T ss_pred ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-h------h
Confidence 7999999974311 111222344567788899888877776654 333 7999999764432211 1 2
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhh
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.+.++.. +...|+.+|...+.+.
T Consensus 157 ~~~~~~~-~~~~Y~~sK~a~~~l~ 179 (256)
T PRK09186 157 YEGTSMT-SPVEYAAIKAGIIHLT 179 (256)
T ss_pred ccccccC-CcchhHHHHHHHHHHH
Confidence 2333333 3357999999888774
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-11 Score=121.66 Aligned_cols=223 Identities=17% Similarity=0.115 Sum_probs=144.4
Q ss_pred CCCCEEEEEcC--CchhHHHHHHHHHhcCCCcEEEEEcCCCc-ccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGA--AGFIGSHVTNRLIKNYPDYEIVALDKLDY-CSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGa--tG~iG~~l~~~L~~~~~g~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+..+++||||| ++-||.++++.|+++ |++|++.+|... .+....+.... .....+.+|+.|.+++..++..
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHH
Confidence 45689999996 679999999999999 899998765321 11111111111 1234678999999988777632
Q ss_pred ---CCCCEEEEcCccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
..+|++||+||..... ...++....+++|+.++..+.+++... ....++|++||....-
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-------- 151 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-------- 151 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc--------
Confidence 3699999999975321 122345567899999998888877542 1236899999865321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+......-............ ++
T Consensus 152 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~------- 216 (260)
T PRK06997 152 ------VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNA--PL------- 216 (260)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcC--cc-------
Confidence 1112346999999999999888765 47899999999886542110000011111111111 11
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+...+|+++++..++... ..++++.+.++
T Consensus 217 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 217 RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred cccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 12467899999999998753 24566766554
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-12 Score=126.54 Aligned_cols=127 Identities=20% Similarity=0.232 Sum_probs=93.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+++.+++.++++..
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 88 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG 88 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence 589999999999999999999999863 24567999999998887753
Q ss_pred CCCeEEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 419 RPTHVLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 419 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++|++||+||.... +..+...+.....+++|+.++..+++++... +.++++++|+.+.... +
T Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~---~----------- 154 (257)
T PRK12744 89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT---P----------- 154 (257)
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---C-----------
Confidence 58999999996421 1122334556788999999999999999753 2356666444332100 1
Q ss_pred CCCCCCChhhhhhHhHhhhhhH
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
....|+.+|...|.+...
T Consensus 155 ----~~~~Y~~sK~a~~~~~~~ 172 (257)
T PRK12744 155 ----FYSAYAGSKAPVEHFTRA 172 (257)
T ss_pred ----CcccchhhHHHHHHHHHH
Confidence 235799999999988433
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=129.27 Aligned_cols=127 Identities=17% Similarity=0.207 Sum_probs=96.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||+|.||.+++++|+++|++| .++.+|+++.+++..++++. .+|+|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 87 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGL 87 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 489999999999999999999999854 46788999999998888753 57999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
||+||...........+.....+++|+.++.++++++... +.++|++||...+.+ .. +
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------------~~-~ 149 (258)
T PRK08628 88 VNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----------------QG-G 149 (258)
T ss_pred EECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----------------CC-C
Confidence 9999965222222223455678899999999999888642 336999998754421 11 4
Q ss_pred CChhhhhhHhHhhhhhH
Q 035631 500 RSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~ 516 (684)
...|+.+|...+.+...
T Consensus 150 ~~~Y~~sK~a~~~~~~~ 166 (258)
T PRK08628 150 TSGYAAAKGAQLALTRE 166 (258)
T ss_pred CchhHHHHHHHHHHHHH
Confidence 46899999999988433
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.8e-12 Score=126.21 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=96.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~ 92 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI 92 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999865 35788999999997776642 5799
Q ss_pred EEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc-----CC-eEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK-----NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+|+....+ ..+...+.....+++|+.++.++++++... +. ++|++||...+.+....
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------------- 159 (259)
T PRK08213 93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------------- 159 (259)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------------
Confidence 99999864211 112223444577889999999999988754 33 69999997655322111
Q ss_pred CCCCCChhhhhhHhHhhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~ 515 (684)
. .+...|+.+|+..|.+..
T Consensus 160 ~-~~~~~Y~~sKa~~~~~~~ 178 (259)
T PRK08213 160 V-MDTIAYNTSKGAVINFTR 178 (259)
T ss_pred c-cCcchHHHHHHHHHHHHH
Confidence 0 144789999999987743
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-12 Score=127.82 Aligned_cols=125 Identities=20% Similarity=0.185 Sum_probs=94.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|+|||
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~ 95 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVN 95 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 489999999999999999999999876 36678999999988887654 5799999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||....... +.........+++|+.++.++++++... ..++|++||.....+. . .
T Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~-~ 157 (255)
T PRK06841 96 SAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL-----------------E-R 157 (255)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-----------------C-C
Confidence 9996521111 1223445578999999999999998753 2479999997532110 0 2
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...+.+.
T Consensus 158 ~~~Y~~sK~a~~~~~ 172 (255)
T PRK06841 158 HVAYCASKAGVVGMT 172 (255)
T ss_pred CchHHHHHHHHHHHH
Confidence 357999999988773
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-12 Score=130.40 Aligned_cols=127 Identities=16% Similarity=0.089 Sum_probs=96.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 3589999999999999999999999865 35678999999998887753 5799
Q ss_pred EEEcceecCCC---CccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEeccee-eecCCCCCCCCCCCCccC
Q 035631 423 VLNAAGITGRP---NVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCI-YEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 423 Vih~a~~~~~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~v-y~~~~~~~~~~~~~~~e~ 493 (684)
|||+||..+.+ -.+...++....+++|+.++.++++++... ..++|++||... ++. +
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----~---------- 163 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG----L---------- 163 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC----C----------
Confidence 99999975211 112234566789999999999999988742 236888887642 320 0
Q ss_pred CCCCCCCChhhhhhHhHhhhhhH
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
....|+.+|...|.+...
T Consensus 164 -----~~~~Y~~sK~a~~~~~~~ 181 (280)
T PLN02253 164 -----GPHAYTGSKHAVLGLTRS 181 (280)
T ss_pred -----CCcccHHHHHHHHHHHHH
Confidence 224799999999988443
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3e-12 Score=126.60 Aligned_cols=127 Identities=19% Similarity=0.176 Sum_probs=96.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRID 85 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999865 35678999999998888754 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|||+||...... .+.........+++|+.++.++++++.+. +.++|++||...+. +..
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~~~ 148 (245)
T PRK12937 86 VLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------------PLP 148 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------------CCC
Confidence 9999999652111 12223455678899999999999998764 23799998864432 111
Q ss_pred CCCChhhhhhHhHhhhhhH
Q 035631 498 FTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~ 516 (684)
+.+.|+.+|...+.+...
T Consensus 149 -~~~~Y~~sK~a~~~~~~~ 166 (245)
T PRK12937 149 -GYGPYAASKAAVEGLVHV 166 (245)
T ss_pred -CCchhHHHHHHHHHHHHH
Confidence 346899999999877433
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-12 Score=125.89 Aligned_cols=125 Identities=20% Similarity=0.171 Sum_probs=93.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+||
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 87 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALV 87 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEE
Confidence 589999999999999999999999876 34557889999888887753 579999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+|+...... .....+.....+++|+.++.++++++.+ .+. ++|++||...+++. .
T Consensus 88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~- 149 (239)
T PRK12828 88 NIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------------P- 149 (239)
T ss_pred ECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------------C-
Confidence 9998541111 1122334456788999999999998863 333 69999998766421 1
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|...+.+.
T Consensus 150 ~~~~y~~sk~a~~~~~ 165 (239)
T PRK12828 150 GMGAYAAAKAGVARLT 165 (239)
T ss_pred CcchhHHHHHHHHHHH
Confidence 3467999999887663
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.5e-11 Score=125.96 Aligned_cols=190 Identities=17% Similarity=0.117 Sum_probs=124.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++++|+||||+|+||+++++.|.++ |++|++++|+... ...... .....+..+.+|+.|.+.+.+.+ .++|+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~--l~~~~~-~~~~~v~~v~~Dvsd~~~v~~~l--~~IDi 248 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDK--ITLEIN-GEDLPVKTLHWQVGQEAALAELL--EKVDI 248 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHh-hcCCCeEEEEeeCCCHHHHHHHh--CCCCE
Confidence 34689999999999999999999999 8999999986421 111000 11124678889999999988887 68999
Q ss_pred EEEcCccCCc-CCCCCChHHHHHHHHHHHHHHHHHHHh----cCC---CcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 90 IMHFAAQTHV-DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQ---VKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 90 Vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~---~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
+||+||.... +.+.++....+++|+.++.++++++.. .+. ...+|.+|++.. . + ..
T Consensus 249 LInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~--------------~-~~ 312 (406)
T PRK07424 249 LIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N--------------P-AF 312 (406)
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c--------------C-CC
Confidence 9999996532 223334567889999999999998753 121 123455554211 0 1 11
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
...|+.||.+.+.+..-.....+..+..+.| |+... .. .+ ...+..+|+|+.+
T Consensus 313 ~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t--~~-----------~~----------~~~~spe~vA~~i 365 (406)
T PRK07424 313 SPLYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKS--NL-----------NP----------IGVMSADWVAKQI 365 (406)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcC--CC-----------Cc----------CCCCCHHHHHHHH
Confidence 2369999999988763222223333333333 33221 10 00 1236789999999
Q ss_pred HHHHhcCC
Q 035631 242 DVILHRGV 249 (684)
Q Consensus 242 ~~~~~~~~ 249 (684)
+.+++++.
T Consensus 366 l~~i~~~~ 373 (406)
T PRK07424 366 LKLAKRDF 373 (406)
T ss_pred HHHHHCCC
Confidence 99997654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-12 Score=126.63 Aligned_cols=195 Identities=13% Similarity=0.069 Sum_probs=123.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++|||||+|+||.+++++|+++|+.| .++.+|++|.+++.++++.. ++|
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 479999999999999999999999754 35678999999998888754 579
Q ss_pred eEEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEeccee-eecCCCCCCCCCCCC
Q 035631 422 HVLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCI-YEYDSMHPQGSSIGF 490 (684)
Q Consensus 422 ~Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~v-y~~~~~~~~~~~~~~ 490 (684)
+|||+|+..... ..+...+.....+++|+.++.++++++.+. +.++|++||... ++.+
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------- 151 (248)
T PRK06123 83 ALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP----------- 151 (248)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----------
Confidence 999999965211 111223455678999999999999888753 125899999753 4310
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhhhHH--h---hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLSYLE--I---FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
. ....|+.+|+..|.+.... . .+..+...++..+.++...... ...++..
T Consensus 152 ------~-~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~------------------~~~~~~~ 206 (248)
T PRK06123 152 ------G-EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG------------------EPGRVDR 206 (248)
T ss_pred ------C-CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC------------------CHHHHHH
Confidence 0 1235999999999873222 1 2344445555544322100000 0011100
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCC
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNP 606 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~ 606 (684)
.. .. .+. .-..+++|++++++.++... .+..|++.++
T Consensus 207 ~~-~~--~p~-~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 207 VK-AG--IPM-GRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HH-hc--CCC-CCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 00 00 000 01257899999999988754 2348888765
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.1e-12 Score=128.54 Aligned_cols=197 Identities=13% Similarity=0.041 Sum_probs=133.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC----CCCCCCCceEEEecCCC--HHHHH---Hhh
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH----PSRASPNFKFLKGDITC--ADLMN---YLL 82 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~----~~~~~~~~~~~~~Dl~d--~~~~~---~~~ 82 (684)
++.++||||||.||.+++++|+++ |++|++++|+.. ..+.+. .......+..+.+|+.+ .+.+. +.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~ 128 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPD--KLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETI 128 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHH--HHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHh
Confidence 578999999999999999999999 899999999752 222211 11112356778899975 23333 333
Q ss_pred ccCCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 83 VSEGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 83 ~~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
...++|++||+||.... +..+++....+++|+.++..+.+++.. .+ ..++|++||...+....
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~------ 201 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPS------ 201 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC------
Confidence 33357799999997532 112233456789999999998888743 33 57999999976642100
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|+..+.+.+.++.+. |++++.+.||.+-.+... . .... .
T Consensus 202 ------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~-----------~-~~~~----------~ 253 (320)
T PLN02780 202 ------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS-----------I-RRSS----------F 253 (320)
T ss_pred ------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc-----------c-cCCC----------C
Confidence 0123579999999999998887653 799999999988654210 0 0000 0
Q ss_pred ecccHHHHHHHHHHHHhc
Q 035631 230 SYLYCADVAEAFDVILHR 247 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~ 247 (684)
.....+++|+.++..+..
T Consensus 254 ~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 254 LVPSSDGYARAALRWVGY 271 (320)
T ss_pred CCCCHHHHHHHHHHHhCC
Confidence 124678999999888853
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.7e-12 Score=125.97 Aligned_cols=128 Identities=18% Similarity=0.207 Sum_probs=97.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 432 (684)
.+++|||||+|.||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+||....
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~ 85 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESY 85 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 3589999999999999999999999876 46788999999998887754 58999999996521
Q ss_pred CCc-cccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 433 PNV-DWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 433 ~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
... +...+.....+++|+.++..+++++... + .++|++||...+. +.. +...|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~-~~~~Y~~s 147 (258)
T PRK06398 86 GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-----------------VTR-NAAAYVTS 147 (258)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------------CCC-CCchhhhh
Confidence 111 1223344577899999999999888642 2 4799999975553 111 45689999
Q ss_pred hHhHhhhhhH
Q 035631 507 KAMVTFLSYL 516 (684)
Q Consensus 507 K~~~E~~~~~ 516 (684)
|+..+.+...
T Consensus 148 Kaal~~~~~~ 157 (258)
T PRK06398 148 KHAVLGLTRS 157 (258)
T ss_pred HHHHHHHHHH
Confidence 9999887433
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=125.73 Aligned_cols=126 Identities=17% Similarity=0.196 Sum_probs=94.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
|+|+||||+|+||.+++++|+++|++| .++.+|+.|.+++..+++.. ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 689999999999999999999999876 35678999999988877643 5799999
Q ss_pred cceecC--CCCccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 426 AAGITG--RPNVDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 426 ~a~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
+||... .+..+...+.....+++|+.++..+++.+. +.+. ++|++||...+. +..
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~- 142 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------------PYA- 142 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------------CCC-
Confidence 998641 111223345567889999999777766665 3443 699999974331 111
Q ss_pred CCChhhhhhHhHhhhhh
Q 035631 499 TRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~ 515 (684)
+.+.|+.+|...+.+..
T Consensus 143 ~~~~Y~~sK~~~~~~~~ 159 (248)
T PRK10538 143 GGNVYGATKAFVRQFSL 159 (248)
T ss_pred CCchhHHHHHHHHHHHH
Confidence 44689999999987743
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.3e-12 Score=125.19 Aligned_cols=125 Identities=20% Similarity=0.127 Sum_probs=94.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+||
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3589999999999999999999999865 35667888888877665533 579999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH---cCCeEEEEecce-eeecCCCCCCCCCCCCccCCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE---KNVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~---~~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
|+||...... ..+..+.....+++|+.++.++++++.. .+.++|++||.. .|+. . .
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------------~-~ 146 (249)
T PRK06500 86 INAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------------P-N 146 (249)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------------------C-C
Confidence 9998652111 1334466778999999999999999985 334677777753 4430 1 3
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...|.+.
T Consensus 147 ~~~Y~~sK~a~~~~~ 161 (249)
T PRK06500 147 SSVYAASKAALLSLA 161 (249)
T ss_pred ccHHHHHHHHHHHHH
Confidence 468999999999874
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.2e-12 Score=124.87 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=92.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.+++|||||+|+||.++++.|+++|+.| .++.+|+++.+++.++++.. ++|+||
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV 85 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4589999999999999999999999865 35678999999988877643 479999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH-----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE-----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~-----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+|+...... ...........+++|+.++.++++++.. ...++|++||...+.+.+
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------------ 147 (245)
T PRK12936 86 NNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------------ 147 (245)
T ss_pred ECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------------
Confidence 9999652111 1223345678899999999999998753 223699999975332110
Q ss_pred CCChhhhhhHhHhhh
Q 035631 499 TRSFYSKTKAMVTFL 513 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 148 ~~~~Y~~sk~a~~~~ 162 (245)
T PRK12936 148 GQANYCASKAGMIGF 162 (245)
T ss_pred CCcchHHHHHHHHHH
Confidence 224699999877665
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.4e-12 Score=120.66 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=121.4
Q ss_pred CCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-cc-ccCCCCCCCCCceEEEecCCCHHHHHHhh
Q 035631 5 FEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SL-KNLHPSRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 5 ~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~-~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
..+..+.+|.|+|||||..||.+++.+|.++ |.+++.+.|+.... .. +.+......+++.++++|+.|.++...++
T Consensus 5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~ 82 (282)
T KOG1205|consen 5 LFMERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFV 82 (282)
T ss_pred ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHH
Confidence 3455667899999999999999999999999 88877777754211 11 11222222226999999999999988664
Q ss_pred -----ccCCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCC
Q 035631 83 -----VSEGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 83 -----~~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
...++|++||.||...... ...+....+++|+.|+..+.+++. +.+ -.|+|.+||...+-..
T Consensus 83 ~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~---- 157 (282)
T KOG1205|consen 83 EWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPL---- 157 (282)
T ss_pred HHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCC----
Confidence 2358999999999765211 112233478999998887777763 433 4799999997654211
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEE----EeeCce
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT----TRGNNV 195 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i----lR~~~v 195 (684)
...+.|.+||++.+.+.+-+..+.....++ +-||.|
T Consensus 158 ----------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V 197 (282)
T KOG1205|consen 158 ----------PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPI 197 (282)
T ss_pred ----------CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCce
Confidence 112379999999999998888776443333 455554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=115.85 Aligned_cols=163 Identities=17% Similarity=0.149 Sum_probs=118.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCccccc-----ccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSL-----KNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++++||||+|+||.+++++|+++ |. .|+.++|+...... ..+. ....++.++.+|+.+.+.+..++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~ 76 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELE--ALGAEVTVVACDVADRAALAAALAAIP 76 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 47999999999999999999998 64 78888876421110 0110 1123567889999998887766532
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccc-ccCCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEV-YGETDMESDIGNPEA 156 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~ 156 (684)
..+|+|||+++..... ...++....++.|+.++.++++++++.+ .+++|++||... ++.
T Consensus 77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~------------ 143 (180)
T smart00822 77 ARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN------------ 143 (180)
T ss_pred HHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC------------
Confidence 3479999999965322 2224456678999999999999998765 689999998644 221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCcee
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVY 196 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~ 196 (684)
.....|+.+|...+.+++.. ...+++.+.+.|+.+-
T Consensus 144 ---~~~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 144 ---PGQANYAAANAFLDALAAHR-RARGLPATSINWGAWA 179 (180)
T ss_pred ---CCchhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence 12346999999999999554 4568999999888754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.7e-12 Score=124.36 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=93.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++||||++|+||.+++++|+++|++| .++.+|+++.+++.++++.. ++|
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD 85 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999876 24556999999888877653 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CC-eEEEEecce-eeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NV-LLMNFATGC-IYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~-~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|||+|+...... .+.........+.+|+.++.++++++... +. ++|++||.. +++.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~---------------- 149 (248)
T PRK05557 86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN---------------- 149 (248)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC----------------
Confidence 9999998652111 12233455677889999999999999853 32 599998863 3320
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 150 --~-~~~~y~~sk~a~~~~~ 166 (248)
T PRK05557 150 --P-GQANYAASKAGVIGFT 166 (248)
T ss_pred --C-CCchhHHHHHHHHHHH
Confidence 0 3357999999988663
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-11 Score=122.96 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=96.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~ 430 (684)
++++||||+|+||.+++++|+++|++| +++.+|++|.+++..+++.+ .+|+|||+||..
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~ 84 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG 84 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 479999999999999999999999876 56789999999999988864 589999999975
Q ss_pred CCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 431 GRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 431 ~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
..... +...+.....+++|+.++.++++++. +.+. ++|++||...+.+ .. ....|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------~~-~~~~Y~ 146 (270)
T PRK06179 85 LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----------------AP-YMALYA 146 (270)
T ss_pred CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----------------CC-CccHHH
Confidence 21111 12234557889999999999999864 3443 7999999754421 00 235799
Q ss_pred hhhHhHhhhh
Q 035631 505 KTKAMVTFLS 514 (684)
Q Consensus 505 ~sK~~~E~~~ 514 (684)
.+|...+.+.
T Consensus 147 ~sK~a~~~~~ 156 (270)
T PRK06179 147 ASKHAVEGYS 156 (270)
T ss_pred HHHHHHHHHH
Confidence 9999998773
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.5e-12 Score=123.97 Aligned_cols=126 Identities=21% Similarity=0.251 Sum_probs=91.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++||||||+|+||..++++|+++|++| .++.+|+++.+++.++++.. ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 4589999999999999999999999865 35668999999888777643 58
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEeccee-eecCCCCCCCCCCC
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCI-YEYDSMHPQGSSIG 489 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~v-y~~~~~~~~~~~~~ 489 (684)
|+|||+||.... +..+...++....+++|+.++..+++++.+. +.++|++||... ++..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---------- 151 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---------- 151 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC----------
Confidence 999999996521 1112233444667999999998888655532 135999998753 3210
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 152 -------~-~~~~Y~~sK~~~~~~~ 168 (248)
T PRK06947 152 -------N-EYVDYAGSKGAVDTLT 168 (248)
T ss_pred -------C-CCcccHhhHHHHHHHH
Confidence 0 1246999999998773
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.2e-12 Score=125.53 Aligned_cols=127 Identities=15% Similarity=0.103 Sum_probs=94.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc------CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV------RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~------~~d~V 423 (684)
+++|||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. .+|++
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~l 85 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTV 85 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 489999999999999999999999865 34668999999988888764 27999
Q ss_pred EEcceecC-------CCCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 424 LNAAGITG-------RPNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 424 ih~a~~~~-------~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
||+|+... .+..+...+.....+++|+.++.++++++.. .+ .++|++||.....
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------------- 151 (253)
T PRK08642 86 VNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-------------- 151 (253)
T ss_pred EECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC--------------
Confidence 99998531 0111222345567899999999999999973 22 3699998853221
Q ss_pred cCCCCCCCCChhhhhhHhHhhhhhH
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
+.. |.+.|+.+|...|.+...
T Consensus 152 ---~~~-~~~~Y~~sK~a~~~l~~~ 172 (253)
T PRK08642 152 ---PVV-PYHDYTTAKAALLGLTRN 172 (253)
T ss_pred ---CCC-CccchHHHHHHHHHHHHH
Confidence 122 556899999999988544
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.6e-12 Score=123.54 Aligned_cols=125 Identities=16% Similarity=0.127 Sum_probs=95.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+|+...
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR 88 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 589999999999999999999999876 45678999999999888763 4799999999652
Q ss_pred CC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 432 RP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 432 ~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
.. ..+...+.....+++|+.++.++++++.. .+ .++|++||..... +.. +...|+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~~~-~~~~Y~~ 150 (252)
T PRK08220 89 MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------------PRI-GMAAYGA 150 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------------CCC-CCchhHH
Confidence 11 11223456678899999999999999864 22 3699998874321 111 4578999
Q ss_pred hhHhHhhhh
Q 035631 506 TKAMVTFLS 514 (684)
Q Consensus 506 sK~~~E~~~ 514 (684)
+|...+.+.
T Consensus 151 sK~a~~~~~ 159 (252)
T PRK08220 151 SKAALTSLA 159 (252)
T ss_pred HHHHHHHHH
Confidence 999998774
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.9e-11 Score=117.71 Aligned_cols=205 Identities=16% Similarity=0.122 Sum_probs=135.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
|+++||||++.||.+++++|. + |++|++++|+.. ..+.+.. ......+.++.+|+.|.+++..++..
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPE--AAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHH--HHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 579999999999999999998 6 799999998642 2221111 01122477899999999887766532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ....+......+|+.+...++.+ ..+.+...++|++||...+-.
T Consensus 76 g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~------------ 143 (246)
T PRK05599 76 GEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA------------ 143 (246)
T ss_pred CCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC------------
Confidence 3699999999975321 11122334566777776655444 333321368999999654311
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
......|+.+|+..+.+.+.++.+ .++++..+.||.+..+... ...+.+ -...
T Consensus 144 --~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-------------~~~~~~---------~~~~ 199 (246)
T PRK05599 144 --RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-------------GMKPAP---------MSVY 199 (246)
T ss_pred --CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-------------CCCCCC---------CCCC
Confidence 112346999999999998888765 3788899999988654210 000000 0146
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEecC
Q 035631 234 CADVAEAFDVILHRGVIGHVYNVGT 258 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~~~~~~ni~~ 258 (684)
.+|+|++++.++......+.+.+..
T Consensus 200 pe~~a~~~~~~~~~~~~~~~~~~~~ 224 (246)
T PRK05599 200 PRDVAAAVVSAITSSKRSTTLWIPG 224 (246)
T ss_pred HHHHHHHHHHHHhcCCCCceEEeCc
Confidence 7999999999998765444555553
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.6e-12 Score=123.48 Aligned_cols=127 Identities=16% Similarity=0.147 Sum_probs=91.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEee-------------------------eeccCCChhHHHHHHHhc-------
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEF-------------------------GTGRLEDKNSLLDDMKRV------- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~-------------------------~~~d~~d~~~~~~~~~~~------- 418 (684)
.++++||||+|+||.+++++|+++|++|.. +..|+++.+++..+++..
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 358999999999999999999999987732 335777776665544321
Q ss_pred ----CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCC
Q 035631 419 ----RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 419 ----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
++|++||+||...... .+...+.....+++|+.++..+++++... +.++|++||...+.+
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 151 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS------------ 151 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC------------
Confidence 5799999999652111 11222334677889999999999988753 247999999865421
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhhh
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.. ....|+.||+..+.+..
T Consensus 152 -----~~-~~~~Y~~sKaa~~~~~~ 170 (252)
T PRK12747 152 -----LP-DFIAYSMTKGAINTMTF 170 (252)
T ss_pred -----CC-CchhHHHHHHHHHHHHH
Confidence 11 34689999999997743
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-11 Score=121.42 Aligned_cols=128 Identities=11% Similarity=0.081 Sum_probs=95.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEccee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGI 429 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~ 429 (684)
.++||||||+|.||.+++++|+++|++| .++.+|++|.+++.+.++.. ++|++||+||.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~ 85 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGI 85 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCC
Confidence 4589999999999999999999999876 23447888888888877654 47999999986
Q ss_pred cCCC-CccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 430 TGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 430 ~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
.... ..+...+.....+++|+.++..++..+... +.++|++||.... ..+.. +...|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------------~~~~~-~~~~Y~~ 148 (237)
T PRK12742 86 AVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------------RMPVA-GMAAYAA 148 (237)
T ss_pred CCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------------cCCCC-CCcchHH
Confidence 5211 112334566789999999999998777754 3479999986321 01112 4578999
Q ss_pred hhHhHhhhhh
Q 035631 506 TKAMVTFLSY 515 (684)
Q Consensus 506 sK~~~E~~~~ 515 (684)
+|+..|.+..
T Consensus 149 sKaa~~~~~~ 158 (237)
T PRK12742 149 SKSALQGMAR 158 (237)
T ss_pred hHHHHHHHHH
Confidence 9999997743
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.2e-12 Score=125.26 Aligned_cols=125 Identities=20% Similarity=0.110 Sum_probs=90.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc------CCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV------RPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~------~~d~Vih~a 427 (684)
++++||||+|+||.+++++|+++|++| ..+.+|+.|.+++..+++.. .+|.|||+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999876 34667888888877665542 468999999
Q ss_pred eecCC-CCccccccchhhHhhhchhhhHHH----HHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 428 GITGR-PNVDWCESHRVETIRTNVMGTLTL----ADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 428 ~~~~~-~~~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|.... +..+...+.....+++|+.++.++ ++.+.+.+. ++|++||...+. +.. ..+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~~~-~~~ 144 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------------STP-GRG 144 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------------CCC-Ccc
Confidence 86421 111223345567899999998886 555555554 699998863221 011 346
Q ss_pred hhhhhhHhHhhhh
Q 035631 502 FYSKTKAMVTFLS 514 (684)
Q Consensus 502 ~Y~~sK~~~E~~~ 514 (684)
.|+.+|...|.+.
T Consensus 145 ~Y~~sK~~~~~~~ 157 (256)
T PRK08017 145 AYAASKYALEAWS 157 (256)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999998763
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.1e-12 Score=123.73 Aligned_cols=125 Identities=17% Similarity=0.176 Sum_probs=95.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|+||
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li 85 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILV 85 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 589999999999999999999999865 45678999999998777643 589999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||...... .+.........+++|+.++.++++++.. .+ .++|++||...|.+..
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------------- 148 (248)
T TIGR01832 86 NNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI----------------- 148 (248)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------------
Confidence 9999752111 1222345567889999999999999864 22 3799999987664211
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 149 -~~~~Y~~sKaa~~~~~ 164 (248)
T TIGR01832 149 -RVPSYTASKHGVAGLT 164 (248)
T ss_pred -CCchhHHHHHHHHHHH
Confidence 2347999999998774
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.2e-11 Score=136.12 Aligned_cols=203 Identities=11% Similarity=0.045 Sum_probs=129.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||+|+||.++++.|+++|++| .++.+|++|.+++..+++.. ++|+|
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvv 502 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIV 502 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999876 25667999999988887754 57999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----c--CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----K--NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+||...... .+.........+++|+.++.++++++.. . +.++|++||...+.+.
T Consensus 503 I~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----------------- 565 (681)
T PRK08324 503 VSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG----------------- 565 (681)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------------
Confidence 99999652111 1223345567899999999999888763 2 3479999997554211
Q ss_pred CCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhh-HHHHHHh-h--hhhhcccccc----ceecCCCCCchHH
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQ-VEGLLKA-Y--ENVCTLRLRM----PISSDLSNPRNFV 563 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~----~~~g~~~~~~~~~ 563 (684)
. ....|+.+|...+.+...... +..+...++..++ ..++... . ......++.. ..++.+...+.+
T Consensus 566 ~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~- 643 (681)
T PRK08324 566 P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKRE- 643 (681)
T ss_pred C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCc-
Confidence 1 346899999999988443322 2233333333331 1111000 0 0000000000 012222233344
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhc--C-c-cceeEecCCCcc
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARR--N-C-RGAWNFTNPGVI 609 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~--~-~-~g~~ni~~~~~~ 609 (684)
++.+|++++++.++.. . . +..|++.+|...
T Consensus 644 ----------------v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 644 ----------------VTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred ----------------cCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 9999999999999842 2 3 448999887543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=122.14 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=96.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~ 430 (684)
+++|||||+|.||.+++++|+++|++| .++.+|+.+.+++.++++.+ ++|+|||+||..
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGS 86 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 589999999999999999999999865 45678999999998888765 689999999865
Q ss_pred CCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 431 GRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 431 ~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
.... .+.........+++|+.++..+++++... +.++|++||...+. +.. ....|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------~~~-~~~~Y 148 (252)
T PRK07856 87 PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------------PSP-GTAAY 148 (252)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------------CCC-CCchh
Confidence 2111 12233455678999999999999998641 24799999975442 111 34689
Q ss_pred hhhhHhHhhhhhH
Q 035631 504 SKTKAMVTFLSYL 516 (684)
Q Consensus 504 ~~sK~~~E~~~~~ 516 (684)
+.+|...+.+...
T Consensus 149 ~~sK~a~~~l~~~ 161 (252)
T PRK07856 149 GAAKAGLLNLTRS 161 (252)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887433
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.7e-10 Score=119.15 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=93.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe---------------------eeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------FGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|.||..++++|.++|++|. .+.+|++|.+++..+++.. ++|+|||
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~ 290 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVH 290 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4899999999999999999999998762 4557999999888877643 5799999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHcC-----CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEKN-----VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||....... +...+.....+++|+.++.++++++.... .++|++||...+.+. . .
T Consensus 291 ~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----------------~-~ 352 (450)
T PRK08261 291 NAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----------------R-G 352 (450)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----------------C-C
Confidence 9996621111 22334556788999999999999998632 479999987543211 0 2
Q ss_pred CChhhhhhHhHhhh
Q 035631 500 RSFYSKTKAMVTFL 513 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~ 513 (684)
...|+.+|...+.+
T Consensus 353 ~~~Y~asKaal~~~ 366 (450)
T PRK08261 353 QTNYAASKAGVIGL 366 (450)
T ss_pred ChHHHHHHHHHHHH
Confidence 35799999977666
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=126.11 Aligned_cols=140 Identities=15% Similarity=0.078 Sum_probs=98.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
.++|+||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. +
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 95 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPR 95 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence 3589999999999999999999999865 35678999999998887754 5
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhh----hHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMG----TLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|+|||+||.... ....+.+.....+++|+.+ +..++..+++.+ .++|++||...+..... +..+ ..++.
T Consensus 96 iD~li~nAg~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~-~~~~---~~~~~ 170 (306)
T PRK06197 96 IDLLINNAGVMYT-PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI-HFDD---LQWER 170 (306)
T ss_pred CCEEEECCccccC-CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC-Cccc---cCccc
Confidence 8999999997632 1223344556788999999 555666665543 47999999864321111 1000 22222
Q ss_pred CCCCCCChhhhhhHhHhhhhhH
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
+.. +...|+.||+..+.+...
T Consensus 171 ~~~-~~~~Y~~SK~a~~~~~~~ 191 (306)
T PRK06197 171 RYN-RVAAYGQSKLANLLFTYE 191 (306)
T ss_pred CCC-cHHHHHHHHHHHHHHHHH
Confidence 333 567899999999877433
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=122.01 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=93.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+++.+++.++++.. ++|+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999876 34678999999988887754 5799
Q ss_pred EEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+||..... ..+...+.....+++|+.++..+++++... +.++|++||...+.+. +
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~ 147 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---------------P 147 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC---------------C
Confidence 99999864111 111223445678899999998888777642 2479999987543211 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 148 ---~~~~Y~~sK~a~~~~~ 163 (256)
T PRK08643 148 ---ELAVYSSTKFAVRGLT 163 (256)
T ss_pred ---CCchhHHHHHHHHHHH
Confidence 2357999999988763
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=121.85 Aligned_cols=128 Identities=20% Similarity=0.175 Sum_probs=94.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
++++||||+|.||.+++++|.++|++| .++.+|++|.+++.++++.. ++|+|||+|
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a 87 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNA 87 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 589999999999999999999999876 35668999999998888754 589999999
Q ss_pred eecCCCC-ccccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 428 GITGRPN-VDWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 428 ~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|...... .....+.....+++|+.++..+.+++ ++.+ .++|++||...++.. .. ...
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------------~~-~~~ 150 (255)
T PRK06463 88 GIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----------------AE-GTT 150 (255)
T ss_pred CcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----------------CC-Ccc
Confidence 8652111 12234455678999999976655444 3333 479999998666311 11 335
Q ss_pred hhhhhhHhHhhhhhH
Q 035631 502 FYSKTKAMVTFLSYL 516 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~ 516 (684)
.|+.+|...+.+...
T Consensus 151 ~Y~asKaa~~~~~~~ 165 (255)
T PRK06463 151 FYAITKAGIIILTRR 165 (255)
T ss_pred HhHHHHHHHHHHHHH
Confidence 799999999877433
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.4e-11 Score=121.15 Aligned_cols=126 Identities=16% Similarity=0.192 Sum_probs=96.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.++++||||+|.||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++|
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv 85 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILV 85 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3589999999999999999999999865 45678999999998887764 689999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
|+||...........+.....+++|+.++..+++++... +.++|++||...+.+. . ..
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------------~-~~ 147 (261)
T PRK08265 86 NLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-----------------T-GR 147 (261)
T ss_pred ECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------------C-CC
Confidence 999965222223334556688999999999999987742 2469999887543111 0 23
Q ss_pred ChhhhhhHhHhhhh
Q 035631 501 SFYSKTKAMVTFLS 514 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~ 514 (684)
..|+.+|...+.+.
T Consensus 148 ~~Y~asKaa~~~~~ 161 (261)
T PRK08265 148 WLYPASKAAIRQLT 161 (261)
T ss_pred chhHHHHHHHHHHH
Confidence 57999999988773
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.4e-11 Score=120.90 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=94.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++|||||+|+||.+++++|+++|+.| .++.+|++|.+++..+++.. ++|
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRID 82 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999866 35668999999888777653 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|||+||...... .+...+.....+++|+.++..+++++... +.++|++||.... .
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------------~ 145 (256)
T PRK12743 83 VLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------------T 145 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------------C
Confidence 9999999752111 12234556788999999999999988753 2479999886321 1
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. +...|+.+|...+.+.
T Consensus 146 ~~~-~~~~Y~~sK~a~~~l~ 164 (256)
T PRK12743 146 PLP-GASAYTAAKHALGGLT 164 (256)
T ss_pred CCC-CcchhHHHHHHHHHHH
Confidence 122 4568999999988774
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.5e-11 Score=119.45 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=94.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++|||++|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|+
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 479999999999999999999999876 35678999999998888753 5799
Q ss_pred EEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+|+....+.. +.........+++|+.++.++++++.. .+ .++|++||...+.+ .
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------------~ 150 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG-----------------A 150 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC-----------------C
Confidence 9999986521111 122344567899999999999998874 22 36899888754421 1
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 151 ~-~~~~Y~~sK~a~~~~~ 167 (239)
T PRK07666 151 A-VTSAYSASKFGVLGLT 167 (239)
T ss_pred C-CCcchHHHHHHHHHHH
Confidence 1 3457999999887663
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=121.36 Aligned_cols=125 Identities=16% Similarity=0.154 Sum_probs=92.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++++||||+|+||.+++++|.++|++| .++.+|++|.+++.++++.. ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999998764 45678899999888877653 579
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||..... ..+...+.....+++|+.++.++++++ ++.+ .++|++||...+.+..
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~--------------- 147 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF--------------- 147 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC---------------
Confidence 999999865211 112234556678899999999986655 3333 3799999976553111
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 148 ---~~~~Y~~sK~a~~~~~ 163 (245)
T PRK12824 148 ---GQTNYSAAKAGMIGFT 163 (245)
T ss_pred ---CChHHHHHHHHHHHHH
Confidence 2357999999888763
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-11 Score=121.50 Aligned_cols=128 Identities=13% Similarity=0.077 Sum_probs=97.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 89 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLD 89 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4589999999999999999999999876 35678999999998877754 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH-----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE-----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~-----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||..-..
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------- 152 (263)
T PRK07814 90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------------- 152 (263)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------------
Confidence 9999998642111 1233456778899999999999999974 22 3699998863211
Q ss_pred CCCCCCChhhhhhHhHhhhhhH
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
+.. +.+.|+.+|...+.+...
T Consensus 153 ~~~-~~~~Y~~sK~a~~~~~~~ 173 (263)
T PRK07814 153 AGR-GFAAYGTAKAALAHYTRL 173 (263)
T ss_pred CCC-CCchhHHHHHHHHHHHHH
Confidence 111 456899999999877443
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-11 Score=120.87 Aligned_cols=122 Identities=18% Similarity=0.182 Sum_probs=93.6
Q ss_pred EEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+||||++|+||.+++++|+++|++| .++.+|++|.+++++++++. .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999875 25678999999988888764 57999
Q ss_pred EEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecce-eeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+||..... ..+.........+++|+.++.++++++... + .+++++||.. +|+. +
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~----~------------- 143 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN----A------------- 143 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC----C-------------
Confidence 9999965211 112334566788999999999999998753 2 3699999864 4431 1
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|...+.+.
T Consensus 144 --~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 144 --GQANYAASKAGVIGFT 159 (239)
T ss_pred --CCchhHHHHHHHHHHH
Confidence 3357999999888763
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=119.58 Aligned_cols=127 Identities=16% Similarity=0.144 Sum_probs=95.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++++|||||+|.||..++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34589999999999999999999999865 35778999999988877653 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||...... .+...+.....+++|+.++.++++.+.. .+ .++|++||...+.+.
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 149 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--------------- 149 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC---------------
Confidence 99999998652111 1122345567789999999998888743 32 369999998766411
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 150 --~-~~~~Y~~sK~~~~~~~ 166 (241)
T PRK07454 150 --P-QWGAYCVSKAALAAFT 166 (241)
T ss_pred --C-CccHHHHHHHHHHHHH
Confidence 1 3467999999998773
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-11 Score=118.91 Aligned_cols=126 Identities=19% Similarity=0.126 Sum_probs=96.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eE-----------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceecCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AF-----------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITGR 432 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v-----------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~~ 432 (684)
++++||||+|+||++++++|+++|+ .| .++.+|+.|.+.+.++++.. ++|+|||+|+....
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 86 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRT 86 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 4899999999999999999999998 54 46678999999999888865 36999999997311
Q ss_pred CC--ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 433 PN--VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 433 ~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
+. .....+.....+++|+.++.++++++.. .+ .++|++||...+.+ .. +...|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------------~~-~~~~y~~ 148 (238)
T PRK08264 87 GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----------------FP-NLGTYSA 148 (238)
T ss_pred CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----------------CC-CchHhHH
Confidence 11 1223455667899999999999999764 22 35999999865531 11 4468999
Q ss_pred hhHhHhhhhh
Q 035631 506 TKAMVTFLSY 515 (684)
Q Consensus 506 sK~~~E~~~~ 515 (684)
+|...|.+..
T Consensus 149 sK~a~~~~~~ 158 (238)
T PRK08264 149 SKAAAWSLTQ 158 (238)
T ss_pred HHHHHHHHHH
Confidence 9999987743
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-11 Score=122.77 Aligned_cols=125 Identities=18% Similarity=0.092 Sum_probs=96.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 129 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL 129 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 489999999999999999999999876 24567899988887776653 47
Q ss_pred CeEEEcceecC--CCCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 421 THVLNAAGITG--RPNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 421 d~Vih~a~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|++||+|+... .+..+.+.++....+++|+.++..+++++... +.++|++||...|.+..
T Consensus 130 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~--------------- 194 (294)
T PRK07985 130 DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP--------------- 194 (294)
T ss_pred CEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC---------------
Confidence 99999998541 11223345666788999999999999999753 44799999987663111
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 195 ---~~~~Y~asKaal~~l~ 210 (294)
T PRK07985 195 ---HLLDYAATKAAILNYS 210 (294)
T ss_pred ---CcchhHHHHHHHHHHH
Confidence 2357999999998773
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.5e-11 Score=119.27 Aligned_cols=126 Identities=15% Similarity=0.167 Sum_probs=93.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
+++|||||+|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+|||+||...
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 89 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSS 89 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccc
Confidence 589999999999999999999999876 46778999999888776543 5799999998541
Q ss_pred CC---CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 432 RP---NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 432 ~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
.+ -.....+.....+++|+.++.++++++.. .+ .++|++||...+.+ .+. +...|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------------~~~-~~~~Y 152 (260)
T PRK06523 90 APAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------------LPE-STTAY 152 (260)
T ss_pred cCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------------CCC-Ccchh
Confidence 10 11123455677899999999888776643 33 36999999754421 111 34689
Q ss_pred hhhhHhHhhhh
Q 035631 504 SKTKAMVTFLS 514 (684)
Q Consensus 504 ~~sK~~~E~~~ 514 (684)
+.+|...+.+.
T Consensus 153 ~~sK~a~~~l~ 163 (260)
T PRK06523 153 AAAKAALSTYS 163 (260)
T ss_pred HHHHHHHHHHH
Confidence 99999998773
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.5e-11 Score=123.12 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=99.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 85 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLD 85 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence 3589999999999999999999999865 35678999999998887652 479
Q ss_pred eEEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHHHc----C---CeEEEEecceeeecC----CCCCCCCC-
Q 035631 422 HVLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCKEK----N---VLLMNFATGCIYEYD----SMHPQGSS- 487 (684)
Q Consensus 422 ~Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~---~~~i~~SS~~vy~~~----~~~~~~~~- 487 (684)
+|||+||..... ....+.+..+..+++|+.++.++++++... + .++|++||...+... ...+..+.
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~ 165 (322)
T PRK07453 86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL 165 (322)
T ss_pred EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence 999999965211 112344566788999999999998888752 2 389999998764311 10010000
Q ss_pred -----------CC--CccCCCCCCCCChhhhhhHhHhhh
Q 035631 488 -----------IG--FKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 488 -----------~~--~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
.+ ..+..+.. |.+.|+.||++.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~ 203 (322)
T PRK07453 166 GDLSGFEAGFKAPISMADGKKFK-PGKAYKDSKLCNMLT 203 (322)
T ss_pred hhhhcchhcccccccccCccCCC-ccchhhHhHHHHHHH
Confidence 00 11122334 778899999988765
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.2e-11 Score=117.47 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=94.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------eeeeccCCChhHHHHHHHh----cCCCeEEEcceecCCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------EFGTGRLEDKNSLLDDMKR----VRPTHVLNAAGITGRPN 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------~~~~~d~~d~~~~~~~~~~----~~~d~Vih~a~~~~~~~ 434 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++. .++|+|||+|+......
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 83 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQP 83 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCC
Confidence 589999999999999999999999987 4677899999988777663 25799999999752211
Q ss_pred c-cccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 435 V-DWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 435 ~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
. +.........+++|+.++.++++++.. .+. ++|++||..+|+. + ....|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~---------------~~~~Y~~sK~ 144 (234)
T PRK07577 84 LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA----L---------------DRTSYSAAKS 144 (234)
T ss_pred hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC----C---------------CchHHHHHHH
Confidence 1 112345567889999998888777653 333 6999999876641 1 2357999999
Q ss_pred hHhhhh
Q 035631 509 MVTFLS 514 (684)
Q Consensus 509 ~~E~~~ 514 (684)
..|.+.
T Consensus 145 a~~~~~ 150 (234)
T PRK07577 145 ALVGCT 150 (234)
T ss_pred HHHHHH
Confidence 998773
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.6e-11 Score=119.65 Aligned_cols=126 Identities=20% Similarity=0.164 Sum_probs=93.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+|+++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. .+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4699999999999999999999999764 46778999999998887653 4799
Q ss_pred EEEcceecCCCCc-c-ccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRPNV-D-WCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~~~-~-~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||....... . ...+.....+++|+.++.++++++ ++.+ .++|++||...+.+. +
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------------~ 146 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------------P 146 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------------C
Confidence 9999996521111 1 223556788999999999988744 3443 369999987543210 1
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 147 ---~~~~Y~asK~a~~~~~ 162 (257)
T PRK07024 147 ---GAGAYSASKAAAIKYL 162 (257)
T ss_pred ---CCcchHHHHHHHHHHH
Confidence 2357999999998774
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-11 Score=119.20 Aligned_cols=125 Identities=16% Similarity=0.195 Sum_probs=92.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++||||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. .+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4589999999999999999999999865 34567899999888877643 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||...... .+...+..+..+++|+.++.++++++... + .++|++||...+.+..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-------------- 150 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-------------- 150 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC--------------
Confidence 99999999652111 12233455678999999999998888742 2 3599999875442111
Q ss_pred CCCCCCChhhhhhHhHhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 151 ----~~~~y~~sK~a~~~~ 165 (247)
T PRK05565 151 ----CEVLYSASKGAVNAF 165 (247)
T ss_pred ----CccHHHHHHHHHHHH
Confidence 235799999887765
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.5e-11 Score=117.64 Aligned_cols=124 Identities=13% Similarity=0.038 Sum_probs=95.6
Q ss_pred EEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceec
Q 035631 375 LIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGIT 430 (684)
Q Consensus 375 lItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~ 430 (684)
|||||+|+||..++++|+++|++| +++.+|++|.+++..+++.. ++|++||+||..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 699999999999999999999765 46778999999999998875 369999999975
Q ss_pred CCCC-ccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 431 GRPN-VDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 431 ~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.... .+...+.....+++|+.++.+++++....+ .++|++||...|.. .. +.+.|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----------------~~-~~~~Y~~sK~ 142 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----------------SA-SGVLQGAINA 142 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----------------CC-cchHHHHHHH
Confidence 2211 122345667889999999999999665544 36999999876631 11 4568999999
Q ss_pred hHhhhhhH
Q 035631 509 MVTFLSYL 516 (684)
Q Consensus 509 ~~E~~~~~ 516 (684)
..+.+...
T Consensus 143 a~~~~~~~ 150 (230)
T PRK07041 143 ALEALARG 150 (230)
T ss_pred HHHHHHHH
Confidence 99877433
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.8e-11 Score=117.57 Aligned_cols=127 Identities=20% Similarity=0.217 Sum_probs=93.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999765 45678999999998887754 5
Q ss_pred CCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 420 PTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+|+|||+||....+.. ..........+++|+.++.++++++.. .+ .++|++||.....+
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 146 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG--------------- 146 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC---------------
Confidence 7999999997621111 112334457789999999999998753 23 36999998753321
Q ss_pred CCCCCCCChhhhhhHhHhhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.+. +...|+.||...+.+.
T Consensus 147 -~~~-~~~~Y~~sK~a~~~~~ 165 (248)
T PRK08251 147 -LPG-VKAAYAASKAGVASLG 165 (248)
T ss_pred -CCC-CcccHHHHHHHHHHHH
Confidence 111 3468999999988764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.3e-11 Score=119.32 Aligned_cols=125 Identities=16% Similarity=0.167 Sum_probs=91.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++|+
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~ 82 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAA 82 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999999999999999876 24678999999998888764 4789
Q ss_pred EEEcceecCCCC--ccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 423 VLNAAGITGRPN--VDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 423 Vih~a~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
|||+|+...... .+...+.....+++|+.++..+++++... +.++|++||...+.+.
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------------- 149 (247)
T PRK09730 83 LVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------------- 149 (247)
T ss_pred EEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-------------
Confidence 999998642111 11223345578999999998888776643 2359999997543211
Q ss_pred CCCCCCCCChhhhhhHhHhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+. ....|+.+|...|.+.
T Consensus 150 ---~~-~~~~Y~~sK~~~~~~~ 167 (247)
T PRK09730 150 ---PG-EYVDYAASKGAIDTLT 167 (247)
T ss_pred ---CC-cccchHhHHHHHHHHH
Confidence 11 1236999999998763
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.9e-11 Score=119.72 Aligned_cols=124 Identities=23% Similarity=0.212 Sum_probs=94.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc------CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV------RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~------~~d~V 423 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999999999865 45678999999988877643 57999
Q ss_pred EEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----c-CCeEEEEecce-eeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----K-NVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+||....... ....+.....+++|+.++.++++++.. . +.++|++||.. +|+ ..
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-~~---------------- 144 (260)
T PRK08267 82 FNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG-QP---------------- 144 (260)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC-CC----------------
Confidence 999997621111 122345678899999999999999864 2 34799998874 332 10
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 145 --~~~~Y~~sKaa~~~~~ 160 (260)
T PRK08267 145 --GLAVYSATKFAVRGLT 160 (260)
T ss_pred --CchhhHHHHHHHHHHH
Confidence 2357999999988763
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5e-11 Score=118.53 Aligned_cols=124 Identities=14% Similarity=0.104 Sum_probs=91.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
++|+||||+|+||.+++++|+++|++| .++.+|+++.+++..+++.. ++|+|||+|
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 87 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNA 87 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 589999999999999999999999976 35678999999998888754 579999999
Q ss_pred eecCCCC---ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecce-eeecCCCCCCCCCCCCccCCCCCC
Q 035631 428 GITGRPN---VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 428 ~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|...... .+.........+++|+.++..+++.+.. .+ .++|++||.. +++. +.
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-----------------~~- 149 (255)
T PRK06057 88 GISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-----------------AT- 149 (255)
T ss_pred CcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------------CC-
Confidence 8652100 1122344567889999999888887753 32 3688888863 4431 11
Q ss_pred CCChhhhhhHhHhhh
Q 035631 499 TRSFYSKTKAMVTFL 513 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~ 513 (684)
+...|+.+|+..+.+
T Consensus 150 ~~~~Y~~sKaal~~~ 164 (255)
T PRK06057 150 SQISYTASKGGVLAM 164 (255)
T ss_pred CCcchHHHHHHHHHH
Confidence 335799999877666
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-11 Score=121.90 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=91.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
|+|+||||+|+||.+++++|+++|++| .++.+|+.|.+++.++++.. ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999876 34678999999988877642 5799
Q ss_pred EEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+||....... +...+.....+++|+.++.++.+++ .+.+ .++|++||...+.+ .
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------------~ 143 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----------------G 143 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----------------C
Confidence 9999996521111 1112334457789998888877665 4444 37999999865531 1
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|+..+.+.
T Consensus 144 ~-~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 144 P-AMSSYNVAKAGVVALS 160 (270)
T ss_pred C-CchHHHHHHHHHHHHH
Confidence 1 3468999999887663
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.8e-11 Score=116.20 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=93.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.++|+||||+|+||.+++++|+++|++| .++.+|+.|.+++.+.++.. ++|+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV 85 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3589999999999999999999999865 34668999999988888753 5799
Q ss_pred EEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc---C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 423 VLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK---N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 423 Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|||+|+....+.. +...+.....+++|+.++.++++++... + .++|++||...+. +..
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~~~ 148 (237)
T PRK07326 86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------------FFA 148 (237)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------------CCC
Confidence 9999986521111 1223445678999999999999998752 2 3588998874432 111
Q ss_pred CCCChhhhhhHhHhhh
Q 035631 498 FTRSFYSKTKAMVTFL 513 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~ 513 (684)
+...|+.+|+..+.+
T Consensus 149 -~~~~y~~sk~a~~~~ 163 (237)
T PRK07326 149 -GGAAYNASKFGLVGF 163 (237)
T ss_pred -CCchHHHHHHHHHHH
Confidence 346799999988765
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.1e-11 Score=118.41 Aligned_cols=194 Identities=12% Similarity=0.120 Sum_probs=121.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++||||++|+||..+++.|+++|+.| .++.+|+++.+++.++++.. ++|+
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999865 35678999998888777653 4799
Q ss_pred EEEcceecCCCC----------ccccccchhhHhhhchhhhHHHHHHHHH----c--CCeEEEEecceeeecCCCCCCCC
Q 035631 423 VLNAAGITGRPN----------VDWCESHRVETIRTNVMGTLTLADVCKE----K--NVLLMNFATGCIYEYDSMHPQGS 486 (684)
Q Consensus 423 Vih~a~~~~~~~----------~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~i~~SS~~vy~~~~~~~~~~ 486 (684)
|||+||...... .+...+.....+++|+.++..+++++.. . +.++|++||...|+.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-------- 157 (253)
T PRK08217 86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-------- 157 (253)
T ss_pred EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC--------
Confidence 999998541100 1222344556788999999888766553 2 235888888766531
Q ss_pred CCCCccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCch
Q 035631 487 SIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 487 ~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 561 (684)
. +...|+.+|...+.+..... .+..+...++..+.+..... ... .
T Consensus 158 ----------~-~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---------~~~----------~ 207 (253)
T PRK08217 158 ----------M-GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---------MKP----------E 207 (253)
T ss_pred ----------C-CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---------cCH----------H
Confidence 1 34679999999987733222 12233333333221110000 000 1
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccc-eeEecCCC
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRG-AWNFTNPG 607 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g-~~ni~~~~ 607 (684)
+........ ....+.+.+|+++++..++... ..| +|++.++-
T Consensus 208 ~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 208 ALERLEKMI----PVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHhcC----CcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 100000000 0112378999999999998755 344 88887753
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.3e-11 Score=118.05 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=95.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------------eeeccCCChhHHHHHHHhc--
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------------FGTGRLEDKNSLLDDMKRV-- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------------~~~~d~~d~~~~~~~~~~~-- 418 (684)
++++||||+|+||.+++++|+++|++|. ++.+|+++.+++..+++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 86 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE 86 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999998761 3458999999998887754
Q ss_pred ---CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCC
Q 035631 419 ---RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 419 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
++|+|||+||...... .+...+.....+++|+.++.++++++... +.++|++||..... +
T Consensus 87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----~------ 155 (273)
T PRK08278 87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-----P------ 155 (273)
T ss_pred HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc-----c------
Confidence 6899999999752111 12233455678889999999999999742 24688887752110 0
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhhhH
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
.... +...|+.+|+..|.+...
T Consensus 156 ----~~~~-~~~~Y~~sK~a~~~~~~~ 177 (273)
T PRK08278 156 ----KWFA-PHTAYTMAKYGMSLCTLG 177 (273)
T ss_pred ----cccC-CcchhHHHHHHHHHHHHH
Confidence 0012 457899999999988443
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.6e-11 Score=117.73 Aligned_cols=127 Identities=9% Similarity=0.067 Sum_probs=94.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|.||.+++++|+++|+.| .++.+|+++.+++..+++.+ ++|+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 379999999999999999999999876 24568999999988887764 5799
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|||+|+...... .+...+.....+++|+.++.++++++... +.++|++||...+. +..
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------------~~~ 152 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------------PMP 152 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------------CCC
Confidence 999997441111 12233455677889999999999988752 34799998874331 011
Q ss_pred CCCChhhhhhHhHhhhhhH
Q 035631 498 FTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~ 516 (684)
....|+.+|...+.+...
T Consensus 153 -~~~~Y~asK~a~~~l~~~ 170 (264)
T PRK07576 153 -MQAHVCAAKAGVDMLTRT 170 (264)
T ss_pred -CccHHHHHHHHHHHHHHH
Confidence 346799999999877433
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.7e-11 Score=118.54 Aligned_cols=125 Identities=20% Similarity=0.121 Sum_probs=94.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~ 428 (684)
+++|||||+|+||.+++++|+++|++| .++.+|+++.+++.++++.. ++|+|||+||
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 489999999999999999999999977 34678999999998887655 6899999999
Q ss_pred ecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 429 ITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 429 ~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
..... ..+...+.....+++|+.++.++++++.. ...++|++||...+.+ .. ....|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~-~~~~Y 143 (274)
T PRK05693 82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV-----------------TP-FAGAY 143 (274)
T ss_pred CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC-----------------CC-CccHH
Confidence 65211 11223355667899999999999998854 2236888888643310 01 34679
Q ss_pred hhhhHhHhhhh
Q 035631 504 SKTKAMVTFLS 514 (684)
Q Consensus 504 ~~sK~~~E~~~ 514 (684)
+.+|...+.+.
T Consensus 144 ~~sK~al~~~~ 154 (274)
T PRK05693 144 CASKAAVHALS 154 (274)
T ss_pred HHHHHHHHHHH
Confidence 99999988773
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-10 Score=112.59 Aligned_cols=167 Identities=10% Similarity=0.063 Sum_probs=114.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++++||||++-||.++++.|+++ |++|++.+|+.. ....+.. ......+..+.+|+.+.+++..++..
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~--~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQS--ALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999 899999998642 2211110 01123467788999999988766531
Q ss_pred -C-CCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 -E-GIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 -~-~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
. ++|++||+||...... .+++....+..|+.++..+++.+ ++.+....+|++||...+
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------- 148 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH----------- 148 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----------
Confidence 2 6999999998532211 11223345566776665554433 333223689999985322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGP 198 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 198 (684)
.+...|+.+|+..+.+.+..+.+ +++++..+.||++-.+
T Consensus 149 ------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 ------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 11346999999999998877665 4799999999988765
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.5e-11 Score=117.74 Aligned_cols=205 Identities=14% Similarity=0.068 Sum_probs=133.3
Q ss_pred EEEEEcCCchhHHHHHHHHHh----cCCCcEEEEEcCCCccccccc----CCCCCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 14 KILITGAAGFIGSHVTNRLIK----NYPDYEIVALDKLDYCSSLKN----LHPSRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~----~~~g~~V~~~~r~~~~~~~~~----l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
.|+||||+|.||.+++++|++ . |++|++++|+.. .... +........+.++.+|+.+.+++..++...
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~ 77 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSP--GSVLVLSARNDE--ALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKAL 77 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccC--CcEEEEEEcCHH--HHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHH
Confidence 589999999999999999997 5 899999999642 1111 111111235788999999998877655211
Q ss_pred ---------CCCEEEEcCccCCc--C-C----CCCChHHHHHHHHHHHHHHHHHHHh----c-CCCcEEEEEeCcccccC
Q 035631 86 ---------GIDTIMHFAAQTHV--D-N----SFGNSFEFTNNNIYGTHVLLEACKL----T-GQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 86 ---------~~d~Vih~a~~~~~--~-~----~~~~~~~~~~~n~~~~~~ll~~~~~----~-~~~~~~i~~SS~~vyg~ 144 (684)
+.|+|||+||.... . . ..++....+++|+.++..+.+++.. . +...++|++||...+..
T Consensus 78 ~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~ 157 (256)
T TIGR01500 78 RELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP 157 (256)
T ss_pred HhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence 23699999996431 1 1 1123456889999998777766543 2 21358999999765421
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----HHHHHHHHcC
Q 035631 145 TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI-----PKFILLAMKG 216 (684)
Q Consensus 145 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~~~~~~ 216 (684)
......|+.+|...+.+.+.++.+ .++.+..+.||++-.+... .+. +.........
T Consensus 158 --------------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~ 221 (256)
T TIGR01500 158 --------------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ--QVREESVDPDMRKGLQEL 221 (256)
T ss_pred --------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH--HHHHhcCChhHHHHHHHH
Confidence 122357999999999999888766 3788899999988544210 000 0011111111
Q ss_pred CceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 217 QQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 217 ~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.+ ...+...+|+|.+++.++.+
T Consensus 222 ~~---------~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 222 KA---------KGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred Hh---------cCCCCCHHHHHHHHHHHHhc
Confidence 10 01246789999999999863
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.6e-11 Score=119.68 Aligned_cols=179 Identities=15% Similarity=0.144 Sum_probs=118.0
Q ss_pred EEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCC-CC-CCCCCceEEEecCCCHHHHHHhhcc-----CCC
Q 035631 16 LITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLH-PS-RASPNFKFLKGDITCADLMNYLLVS-----EGI 87 (684)
Q Consensus 16 lItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 87 (684)
+||||++.||.++++.|+++ | ++|++.+|+... ...+. .. .....+.++.+|+.|.+++..++.. ..+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLK--AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 69999999999999999999 8 899999986421 11111 00 1123577889999999987766532 368
Q ss_pred CEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHH----hcCC-CcEEEEEeCcccccCCC---CCC--CCC
Q 035631 88 DTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQ-VKRFIHVSTDEVYGETD---MES--DIG 152 (684)
Q Consensus 88 d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~-~~~~i~~SS~~vyg~~~---~~~--~~~ 152 (684)
|++||+||..... .+.+.....+++|+.++..+.+++. +.+. ..++|++||...+-... ..+ ...
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG 156 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence 9999999974321 1233455788999999777765543 3221 36999999976531100 000 000
Q ss_pred --------C-C-------CCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 035631 153 --------N-P-------EASQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGP 198 (684)
Q Consensus 153 --------~-~-------e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 198 (684)
. + ......+...|+.||.+.+.+.+.++++ .++.++.++||+|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT 222 (308)
T ss_pred hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence 0 0 0012234567999999977776666554 3788999999999643
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.6e-11 Score=118.41 Aligned_cols=125 Identities=15% Similarity=0.149 Sum_probs=95.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||+|.||..++++|+++|+.| .++.+|+++.+++..+++.. .+|++
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l 95 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL 95 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 489999999999999999999999865 46778999999988887754 57999
Q ss_pred EEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 424 LNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 424 ih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
||+||..... ..+...+..+..+++|+.++..+++++.. .+ .++|++||...+.+..
T Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------- 158 (258)
T PRK06935 96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK----------------- 158 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------------
Confidence 9999965211 11223345567889999998888877764 33 3699999986653111
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 159 -~~~~Y~asK~a~~~~~ 174 (258)
T PRK06935 159 -FVPAYTASKHGVAGLT 174 (258)
T ss_pred -CchhhHHHHHHHHHHH
Confidence 2347999999999874
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.1e-11 Score=117.38 Aligned_cols=126 Identities=19% Similarity=0.082 Sum_probs=93.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|.||.+++++|.++|++| .++.+|+++.+++..+++.. ++|+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI 86 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 489999999999999999999999876 35678999999988887753 6899
Q ss_pred EEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||.... +..+...+.....+++|+.++..+.+++.. .+ .++|++||...+.. +
T Consensus 87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------~ 150 (254)
T PRK07478 87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------------G 150 (254)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------------C
Confidence 9999996521 111233345678899999988887666543 33 36999999754420 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. +...|+.||...+.+.
T Consensus 151 ~~-~~~~Y~~sK~a~~~~~ 168 (254)
T PRK07478 151 FP-GMAAYAASKAGLIGLT 168 (254)
T ss_pred CC-CcchhHHHHHHHHHHH
Confidence 11 3468999999998774
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-11 Score=107.21 Aligned_cols=218 Identities=18% Similarity=0.210 Sum_probs=154.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
.+.++.|++||.|.++++..... ++.|..+.|+.+..-+ ......+.++.+|....+.+...+ .++..++-
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~~l-----~sw~~~vswh~gnsfssn~~k~~l--~g~t~v~e 123 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQTL-----SSWPTYVSWHRGNSFSSNPNKLKL--SGPTFVYE 123 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcchh-----hCCCcccchhhccccccCcchhhh--cCCcccHH
Confidence 46899999999999999999999 8999999998642211 122346777888877766666665 78888888
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+++-. .+...+..+|-....+-++++.++| +++|+|+|.. -||.. +.-| ..|-.+|.++
T Consensus 124 ~~ggf------gn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~-d~~~~------------~~i~-rGY~~gKR~A 182 (283)
T KOG4288|consen 124 MMGGF------GNIILMDRINGTANINAVKAAAKAG-VPRFVYISAH-DFGLP------------PLIP-RGYIEGKREA 182 (283)
T ss_pred HhcCc------cchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhh-hcCCC------------Cccc-hhhhccchHH
Confidence 88753 4556777899999999999999998 9999999952 22211 1122 3699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-----ChHHHHHHHHHcC-----CceEEecCCCceEecccHHHHHHHHH
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-----KLIPKFILLAMKG-----QQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
|.-+.. .+.++-++||||.+||...... ..+...+....+. ..+++. +....+.+.++++|.+.+
T Consensus 183 E~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal 257 (283)
T KOG4288|consen 183 EAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAAL 257 (283)
T ss_pred HHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHH
Confidence 988764 3478899999999999743211 1222222222222 223433 335568899999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICT 273 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~ 273 (684)
.+++++.-.+ .+++.|+.++..+
T Consensus 258 ~ai~dp~f~G--------vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 258 KAIEDPDFKG--------VVTIEEIKKAAHK 280 (283)
T ss_pred HhccCCCcCc--------eeeHHHHHHHHHH
Confidence 9998876433 3566676665544
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-10 Score=117.10 Aligned_cols=174 Identities=10% Similarity=0.086 Sum_probs=117.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--------cccccCCCC--CCCCCceEEEecCCCHHHHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHPS--RASPNFKFLKGDITCADLMN 79 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--------~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~ 79 (684)
+.+++++||||++.||.++++.|++. |++|++++|+... .....+... .....+..+++|+.+.+++.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 34689999999999999999999999 8999999986421 111111000 01234677899999999887
Q ss_pred Hhhcc-----CCCCEEEEcC-ccCC-----c---CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccc
Q 035631 80 YLLVS-----EGIDTIMHFA-AQTH-----V---DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEV 141 (684)
Q Consensus 80 ~~~~~-----~~~d~Vih~a-~~~~-----~---~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~v 141 (684)
.++.. .++|++||+| |... . ....++....+++|+.++..+.+++.. .+ -.++|++||...
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~ 162 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccc
Confidence 76543 3689999999 6421 1 111223445678888888777766643 22 368999998543
Q ss_pred -ccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCC
Q 035631 142 -YGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGP 198 (684)
Q Consensus 142 -yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 198 (684)
++.. +......|+.+|.....+.+.++.+. ++++..+.||++-.+
T Consensus 163 ~~~~~------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 163 EYNAT------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred cccCc------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 2110 11123469999999999988776653 788999999987543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.1e-11 Score=116.04 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=92.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+.++||||+|+||.+++++|+++|++|. .+.+|++|.+++.++++.. ++|
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID 83 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4799999999999999999999998652 3458999999988877653 579
Q ss_pred eEEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||.... +..+...+.....+++|+.++..+++++.. .+. ++|++||..... +
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~ 146 (246)
T PRK12938 84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------------G 146 (246)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------------C
Confidence 99999996521 112333456678899999998877666543 443 699999874321 1
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. ....|+.+|...+.+.
T Consensus 147 ~~-~~~~y~~sK~a~~~~~ 164 (246)
T PRK12938 147 QF-GQTNYSTAKAGIHGFT 164 (246)
T ss_pred CC-CChhHHHHHHHHHHHH
Confidence 11 4468999999887763
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.5e-11 Score=112.41 Aligned_cols=124 Identities=14% Similarity=0.088 Sum_probs=93.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------eeeccCCChhHHHHHHHhc-CCCeEEEcceecCCCCc-cccccch
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------FGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITGRPNV-DWCESHR 442 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~~-~~~~~~~ 442 (684)
|+++||||+|.||.+++++|.++ ++|. .+.+|++|.++++++++.. ++|++||+||....... +...+..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 79 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDF 79 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHH
Confidence 58999999999999999999998 7773 4567999999999998865 68999999996521111 2233455
Q ss_pred hhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 443 VETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 443 ~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
...+++|+.++.++++++... +..++++||..... +.. ....|+.+|...+.+.
T Consensus 80 ~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------------~~~-~~~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 80 NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------------PIP-GGASAATVNGALEGFV 136 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------------CCC-CchHHHHHHHHHHHHH
Confidence 677899999999999998753 34688888763221 111 3457999999988763
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.2e-11 Score=116.44 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=93.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|+||.+++++|.++|++| .++.+|+.+.+++..+++.. ++|+
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 88 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI 88 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999865 35678999999888777653 4799
Q ss_pred EEEcceecC--CCCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITG--RPNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+|+... .+..+.........+++|+.++..+++++.. .+ .++|++||...+. +
T Consensus 89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~ 151 (252)
T PRK07035 89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------------P 151 (252)
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------------C
Confidence 999998541 1112233445567899999999988888743 23 3688888863321 1
Q ss_pred CCCCCChhhhhhHhHhhhhhH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
.. +.+.|+.+|...+.+...
T Consensus 152 ~~-~~~~Y~~sK~al~~~~~~ 171 (252)
T PRK07035 152 GD-FQGIYSITKAAVISMTKA 171 (252)
T ss_pred CC-CCcchHHHHHHHHHHHHH
Confidence 11 446899999999887433
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-11 Score=118.54 Aligned_cols=125 Identities=19% Similarity=0.106 Sum_probs=90.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
+++||||||+|+||.+++++|+++|++| .++.+|++|.+++..++.. ++|+|||+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW-DVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC-CCCEEEEC
Confidence 3489999999999999999999999876 3456799999988887653 57999999
Q ss_pred ceecCCC-CccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 427 AGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 427 a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
||..... ..+.........+++|+.++.++.+.+. +.+. ++|++||...+.+ .. ..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-----------------~~-~~ 142 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT-----------------GP-FT 142 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC-----------------CC-Cc
Confidence 9966211 1122234445678899998877766543 3343 6999998743210 01 34
Q ss_pred ChhhhhhHhHhhhh
Q 035631 501 SFYSKTKAMVTFLS 514 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~ 514 (684)
..|+.+|...|.+.
T Consensus 143 ~~Y~~sK~a~~~~~ 156 (257)
T PRK09291 143 GAYCASKHALEAIA 156 (257)
T ss_pred chhHHHHHHHHHHH
Confidence 68999999998774
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=8.4e-11 Score=116.70 Aligned_cols=124 Identities=15% Similarity=0.200 Sum_probs=91.1
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEe---------------------------eeeccCCChhHHHHHHHhc-----CC
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------------FGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++||||+|+||.++++.|+++|++|. .+.+|++|.+++.++++.. ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 489999999999999999999998761 2457888999888877653 47
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchh----hhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVM----GTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~----~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||....... +...+.....+++|+. ++..++.++++.+. ++|++||...+.+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-------------- 146 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-------------- 146 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC--------------
Confidence 999999997622111 1223344567888988 77777777776654 699999986654211
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 147 ----~~~~Y~~sK~a~~~~~ 162 (251)
T PRK07069 147 ----DYTAYNASKAAVASLT 162 (251)
T ss_pred ----CCchhHHHHHHHHHHH
Confidence 2357999999888764
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.7e-11 Score=117.79 Aligned_cols=124 Identities=17% Similarity=0.075 Sum_probs=92.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~ 426 (684)
++++||||+|.||..++++|+++|++| .++.+|++|.+++.++++.+ ++|++||+
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ 85 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNN 85 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 589999999999999999999999875 45668999999988777654 47999999
Q ss_pred ceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 427 AGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 427 a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
||....... +...+.....+++|+.++..+++++.. .+. ++|++||...+.+ .. ..
T Consensus 86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~-~~ 147 (273)
T PRK07825 86 AGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-----------------VP-GM 147 (273)
T ss_pred CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-----------------CC-CC
Confidence 997521111 112334567889999999988877753 333 6999999854421 11 34
Q ss_pred ChhhhhhHhHhhh
Q 035631 501 SFYSKTKAMVTFL 513 (684)
Q Consensus 501 ~~Y~~sK~~~E~~ 513 (684)
..|+.+|...+.+
T Consensus 148 ~~Y~asKaa~~~~ 160 (273)
T PRK07825 148 ATYCASKHAVVGF 160 (273)
T ss_pred cchHHHHHHHHHH
Confidence 6799999887755
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-10 Score=116.21 Aligned_cols=125 Identities=18% Similarity=0.099 Sum_probs=94.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|+
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 87 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY 87 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 489999999999999999999999865 45678999999998887765 6899
Q ss_pred EEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+||..... -.+...+.....+++|+.++..+++++. +.+ .++|++||...+.+.
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------------- 151 (253)
T PRK06172 88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA---------------- 151 (253)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------------
Confidence 99999964211 1223345667788999999988777654 233 369999998665421
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 152 -~-~~~~Y~~sKaa~~~~~ 168 (253)
T PRK06172 152 -P-KMSIYAASKHAVIGLT 168 (253)
T ss_pred -C-CCchhHHHHHHHHHHH
Confidence 1 3467999999998774
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=117.76 Aligned_cols=125 Identities=21% Similarity=0.203 Sum_probs=93.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999865 35678999999888777643 5799
Q ss_pred EEEcceecCCCC----------------ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCC
Q 035631 423 VLNAAGITGRPN----------------VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSM 481 (684)
Q Consensus 423 Vih~a~~~~~~~----------------~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~ 481 (684)
+||+|+...... .+...+.....+++|+.++..+++++.. .+ .++|++||...+.+.
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-- 168 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL-- 168 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC--
Confidence 999999542111 1122345567889999999877666543 32 479999998666311
Q ss_pred CCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 482 HPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 482 ~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 169 ---------------~-~~~~Y~~sK~a~~~l~ 185 (278)
T PRK08277 169 ---------------T-KVPAYSAAKAAISNFT 185 (278)
T ss_pred ---------------C-CCchhHHHHHHHHHHH
Confidence 1 3457999999998774
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=114.99 Aligned_cols=125 Identities=19% Similarity=0.175 Sum_probs=92.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc--CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV--RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~--~~d~Vi 424 (684)
|+++||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++|+||
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 589999999999999999999999865 46778999999988887754 469999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...++....+++|+.++.++++++... + .++|++||..-..+ ..
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~- 143 (243)
T PRK07102 82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG-----------------RA- 143 (243)
T ss_pred ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC-----------------CC-
Confidence 9998652111 12223444577899999999999988752 3 36999988632210 01
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 144 ~~~~Y~~sK~a~~~~~ 159 (243)
T PRK07102 144 SNYVYGSAKAALTAFL 159 (243)
T ss_pred CCcccHHHHHHHHHHH
Confidence 2357999999988763
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=118.42 Aligned_cols=126 Identities=20% Similarity=0.146 Sum_probs=93.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~ 120 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI 120 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999876 35678999999998888732 5799
Q ss_pred EEEcceecCCCCccc---cccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 423 VLNAAGITGRPNVDW---CESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 423 Vih~a~~~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|||+||......... ........+++|+.++.++++++. +.+ .++|++||.+++... .
T Consensus 121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------~ 186 (293)
T PRK05866 121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------------S 186 (293)
T ss_pred EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------------C
Confidence 999999652111110 113345678999999988888765 333 379999997655310 0
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+ ....|+.+|+..+.+.
T Consensus 187 p---~~~~Y~asKaal~~l~ 203 (293)
T PRK05866 187 P---LFSVYNASKAALSAVS 203 (293)
T ss_pred C---CcchHHHHHHHHHHHH
Confidence 1 2367999999998773
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.2e-11 Score=117.79 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=93.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++++||||+|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 87 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL 87 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999999876 24668999999988887753 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||+||...... .....+.....+++|+.++..+++++.. .+ .++|++||...+.+.
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 152 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII--------------- 152 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC---------------
Confidence 99999999641111 1222345567889999999999998764 22 369999997543210
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 153 --~-~~~~Y~~sKaa~~~~~ 169 (260)
T PRK07063 153 --P-GCFPYPVAKHGLLGLT 169 (260)
T ss_pred --C-CchHHHHHHHHHHHHH
Confidence 1 3357999999998773
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-10 Score=115.21 Aligned_cols=125 Identities=19% Similarity=0.225 Sum_probs=94.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 89 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV 89 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999999865 35668999999988887653 4799
Q ss_pred EEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+||.... +..+...+.....+++|+.++..+++++... + .++|++||..... +.
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~ 152 (254)
T PRK08085 90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------------GR 152 (254)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------------CC
Confidence 9999996521 1122334555678999999999999988752 2 4799998874321 11
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 153 ~-~~~~Y~~sK~a~~~~~ 169 (254)
T PRK08085 153 D-TITPYAASKGAVKMLT 169 (254)
T ss_pred C-CCcchHHHHHHHHHHH
Confidence 1 3468999999998874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-10 Score=115.75 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=94.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++++||||+|+||.+++++|+++|+.| .++.+|++|.+++..+++.. ++|
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 90 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLD 90 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4589999999999999999999999865 45678999999988877654 469
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+|+..... ..+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. +
T Consensus 91 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~------------ 155 (256)
T PRK06124 91 ILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---A------------ 155 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC---C------------
Confidence 999999965211 11223345567899999999999987764 33 369999987543211 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 156 ---~~~~Y~~sK~a~~~~~ 171 (256)
T PRK06124 156 ---GDAVYPAAKQGLTGLM 171 (256)
T ss_pred ---CccHhHHHHHHHHHHH
Confidence 2357999999988773
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=116.00 Aligned_cols=126 Identities=16% Similarity=0.169 Sum_probs=95.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++|+||||+|+||.+++++|+++|++| .++.+|+++.+++.++++.. ++|
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTID 88 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 3699999999999999999999999865 35778899998888887753 579
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc-------------CCeEEEEecceeeecCCCCCCCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK-------------NVLLMNFATGCIYEYDSMHPQGSS 487 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-------------~~~~i~~SS~~vy~~~~~~~~~~~ 487 (684)
+|||+|+..... ..+.........+++|+.++.++++++... +.++|++||...+.+
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------- 159 (258)
T PRK06949 89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV--------- 159 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC---------
Confidence 999999964211 112233556688999999999999887632 236899988865521
Q ss_pred CCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 488 IGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 488 ~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. +...|+.+|+..+.+.
T Consensus 160 --------~~-~~~~Y~~sK~a~~~~~ 177 (258)
T PRK06949 160 --------LP-QIGLYCMSKAAVVHMT 177 (258)
T ss_pred --------CC-CccHHHHHHHHHHHHH
Confidence 11 3468999999988774
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=115.49 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=96.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+++||||++|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++|++|
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li 90 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILV 90 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 489999999999999999999999875 34678999999998888753 689999
Q ss_pred EcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||..... ..+...++....+++|+.++.++++++... + .++|++||...+.+..
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------- 153 (253)
T PRK08993 91 NNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI----------------- 153 (253)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------------
Confidence 999965211 123344667789999999999999988642 2 3699999987664211
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|+..+.+.
T Consensus 154 -~~~~Y~~sKaa~~~~~ 169 (253)
T PRK08993 154 -RVPSYTASKSGVMGVT 169 (253)
T ss_pred -CCcchHHHHHHHHHHH
Confidence 2247999999998774
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=115.57 Aligned_cols=125 Identities=17% Similarity=0.185 Sum_probs=96.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+++|||||+|.||..++++|+++|++| .++.+|+++.+++..+++.. ++|++|
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv 88 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILI 88 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 479999999999999999999999876 35678999999998888753 589999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----c--CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----K--NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||...... .+...+.....+++|+.++..+++++.. . +.++|++||...+.+..
T Consensus 89 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------------- 151 (251)
T PRK12481 89 NNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI----------------- 151 (251)
T ss_pred ECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------------
Confidence 9999752111 1223456678899999999999888764 2 24799999986653111
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 152 -~~~~Y~asK~a~~~l~ 167 (251)
T PRK12481 152 -RVPSYTASKSAVMGLT 167 (251)
T ss_pred -CCcchHHHHHHHHHHH
Confidence 2247999999998773
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.2e-11 Score=116.47 Aligned_cols=127 Identities=17% Similarity=0.188 Sum_probs=94.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHh---------cCCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKR---------VRPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~---------~~~d~ 422 (684)
||++|||||+|+||.+++++|+++|++| .++.+|+.+.+++..++.+ .++|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 4699999999999999999999999865 3467899999988886543 25799
Q ss_pred EEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+|+.... +-.+...+.....+++|+.++..+++.+.+. + .++|++||...+. +
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~ 143 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-----------------A 143 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-----------------C
Confidence 9999986521 1112233456788999999987777766542 2 3799999986553 1
Q ss_pred CCCCCChhhhhhHhHhhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.. +...|+.+|...|.+..
T Consensus 144 ~~-~~~~Y~~sK~a~~~~~~ 162 (243)
T PRK07023 144 YA-GWSVYCATKAALDHHAR 162 (243)
T ss_pred CC-CchHHHHHHHHHHHHHH
Confidence 11 45689999999998844
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.2e-11 Score=117.06 Aligned_cols=128 Identities=19% Similarity=0.187 Sum_probs=95.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCe-E------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIA-F------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~-v------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
..++++||||+|+||..++++|.++|++ | .++.+|+++.+++.++++.. +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3458999999999999999999999987 5 24668999999988887754 5
Q ss_pred CCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 420 PTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+|+|||+|+....+. .+...+.....+++|+.++.++++++... + .++|++||...+++.+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------------ 152 (260)
T PRK06198 85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP------------ 152 (260)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC------------
Confidence 799999999652111 12233444677999999999999888642 2 2599999987664211
Q ss_pred CCCCCCCCChhhhhhHhHhhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
....|+.+|...|.+..
T Consensus 153 ------~~~~Y~~sK~a~~~~~~ 169 (260)
T PRK06198 153 ------FLAAYCASKGALATLTR 169 (260)
T ss_pred ------CcchhHHHHHHHHHHHH
Confidence 23579999999987743
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.7e-11 Score=101.88 Aligned_cols=159 Identities=16% Similarity=0.116 Sum_probs=118.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.|++|.++|.||||-.|+.+++++++.+--.+|+++.|+.. ........+.....|....+++...+ .++|
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-------~d~at~k~v~q~~vDf~Kl~~~a~~~--qg~d 85 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-------PDPATDKVVAQVEVDFSKLSQLATNE--QGPD 85 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-------CCccccceeeeEEechHHHHHHHhhh--cCCc
Confidence 45678999999999999999999999954459999988631 22223456667778887777777766 7999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+.+.+.|....... .+..+++.-.....+.++|++.| |++|+.+||.+.-. ...-.|-+.
T Consensus 86 V~FcaLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~----------------sSrFlY~k~ 145 (238)
T KOG4039|consen 86 VLFCALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADP----------------SSRFLYMKM 145 (238)
T ss_pred eEEEeecccccccc---cCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCc----------------ccceeeeec
Confidence 99999886543322 33455666666778899999988 99999999965421 112358888
Q ss_pred HHHHHHHHHHHHHhcCC-CEEEEeeCceeCCCC
Q 035631 169 KAGAEMLVMAYHRSYGL-PTITTRGNNVYGPNQ 200 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~ 200 (684)
|-+.|.-+.++ ++ .++|+|||.+.|...
T Consensus 146 KGEvE~~v~eL----~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 146 KGEVERDVIEL----DFKHIIILRPGPLLGERT 174 (238)
T ss_pred cchhhhhhhhc----cccEEEEecCcceecccc
Confidence 99988888665 34 389999999999743
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=118.08 Aligned_cols=139 Identities=13% Similarity=0.069 Sum_probs=101.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
.++++||||+|.||.+++++|+++|++| .++.+|+.|.+++..+++.+ +
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~ 93 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP 93 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 3589999999999999999999999866 45778999999998887653 4
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|++||.||....+....+.+..+..+.+|+.++..+.+.+.. ...++|++||...+.+..+. ..+.+..+
T Consensus 94 iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~-----~~~~~~~~ 168 (313)
T PRK05854 94 IHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW-----DDLNWERS 168 (313)
T ss_pred ccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc-----cccccccc
Confidence 7999999997632222334566778899999998888777763 33579999998643321110 01333333
Q ss_pred CCCCCChhhhhhHhHhhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.. +...|+.||+..+.+..
T Consensus 169 ~~-~~~~Y~~SK~a~~~~~~ 187 (313)
T PRK05854 169 YA-GMRAYSQSKIAVGLFAL 187 (313)
T ss_pred Cc-chhhhHHHHHHHHHHHH
Confidence 33 66789999999987743
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.5e-11 Score=109.40 Aligned_cols=154 Identities=18% Similarity=0.204 Sum_probs=114.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|+|+||||+|-||..++++|++++ ++.|++++|+...+....+.. .....++.++++|+.+.+++..++.. .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g-~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRG-ARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-ceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999994 578888888711122222210 01236789999999999887766532 4
Q ss_pred CCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
.+|++||++|........ +.....+++|+.+...+.+++...+ ..++|++||....-+ ...
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~--------------~~~ 144 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRG--------------SPG 144 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSS--------------STT
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccC--------------CCC
Confidence 799999999987632222 2344678999999999999998844 689999999766422 122
Q ss_pred CChhHHHHHHHHHHHHHHHHh
Q 035631 162 TNPYSATKAGAEMLVMAYHRS 182 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~ 182 (684)
...|+.+|...+.+++.++.+
T Consensus 145 ~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHh
Confidence 347999999999999888765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.9e-10 Score=110.44 Aligned_cols=138 Identities=20% Similarity=0.158 Sum_probs=101.7
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHh-----c
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKR-----V 418 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~-----~ 418 (684)
+++++++|||||+-||..+++.|+++|++| .++..|+++.+.+..+.+. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 445589999999999999999999999965 6888999999998887753 3
Q ss_pred CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 419 RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
.+|+.||+||...... .+...+.....+++|+.++..|-.+... .+ -++|.++|..-|-
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~--------------- 148 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI--------------- 148 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence 5799999999883221 2444567779999999998887777663 33 3799999986662
Q ss_pred CCCCCCCCChhhhhhHhHhhh---hhHHhhhhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFL---SYLEIFVLVIC 524 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~---~~~~~~~~~~~ 524 (684)
+..-.+.|+.||+..-.. .+.|..+.++.
T Consensus 149 ---p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~ 180 (265)
T COG0300 149 ---PTPYMAVYSATKAFVLSFSEALREELKGTGVK 180 (265)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 110236799999876443 33344443333
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.1e-10 Score=114.12 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=92.7
Q ss_pred eEEEEEcCCc--chhHHHHHHHHhcCCeE-----------------------------------eeeeccCCChhHHHHH
Q 035631 372 LKFLIYGKTG--WIGGLLGKYCKDKGIAF-----------------------------------EFGTGRLEDKNSLLDD 414 (684)
Q Consensus 372 m~ilItG~~G--~iG~~l~~~L~~~g~~v-----------------------------------~~~~~d~~d~~~~~~~ 414 (684)
++||||||+| .||.+++++|+++|++| .++.+|+++.+++..+
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 85 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV 85 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4799999996 69999999999998644 4556788888888777
Q ss_pred HHhc-----CCCeEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCC
Q 035631 415 MKRV-----RPTHVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHP 483 (684)
Q Consensus 415 ~~~~-----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~ 483 (684)
++.. ++|+|||+||..... ..+.........+++|+.++..+++++... + .++|++||...+.+.
T Consensus 86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---- 161 (256)
T PRK12748 86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM---- 161 (256)
T ss_pred HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC----
Confidence 7653 589999999865211 111223455677999999999999998743 2 369999987655311
Q ss_pred CCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 484 QGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 484 ~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 162 -------------~-~~~~Y~~sK~a~~~~~ 178 (256)
T PRK12748 162 -------------P-DELAYAATKGAIEAFT 178 (256)
T ss_pred -------------C-CchHHHHHHHHHHHHH
Confidence 1 3357999999999873
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-10 Score=117.94 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=95.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~ 426 (684)
++|+||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+|||+
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~n 106 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINN 106 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 589999999999999999999999876 46778999999998877642 57999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
||.... .........+..+++|+.++..+++.+. +.+ .++|++||.......... .+ .....+.. +..
T Consensus 107 Ag~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--~~---~~~~~~~~-~~~ 179 (315)
T PRK06196 107 AGVMAC-PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW--DD---PHFTRGYD-KWL 179 (315)
T ss_pred CCCCCC-CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc--cc---cCccCCCC-hHH
Confidence 997522 1222334456788999999766666554 443 579999997543211110 00 11112222 556
Q ss_pred hhhhhhHhHhhhh
Q 035631 502 FYSKTKAMVTFLS 514 (684)
Q Consensus 502 ~Y~~sK~~~E~~~ 514 (684)
.|+.||...+.+.
T Consensus 180 ~Y~~SK~a~~~~~ 192 (315)
T PRK06196 180 AYGQSKTANALFA 192 (315)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999988763
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=130.37 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=92.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|+||.+++++|+++|++| ..+.+|++|.+++..+++.. ++
T Consensus 415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i 494 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV 494 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999876 14578999999998888754 57
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----Hc--CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EK--NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|+|||+||....... +.........+++|+.++..+++.+. +. +.++|++||...+.+.
T Consensus 495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-------------- 560 (676)
T TIGR02632 495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-------------- 560 (676)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC--------------
Confidence 999999997521111 22233455778899988877765554 32 2479999997533110
Q ss_pred CCCCCCCChhhhhhHhHhhhhhH
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
. ....|+.+|...+.+...
T Consensus 561 ---~-~~~aY~aSKaA~~~l~r~ 579 (676)
T TIGR02632 561 ---K-NASAYSAAKAAEAHLARC 579 (676)
T ss_pred ---C-CCHHHHHHHHHHHHHHHH
Confidence 1 346899999999988433
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-10 Score=114.25 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=91.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~----~~d~Vi 424 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+||
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv 85 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLI 85 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 489999999999999999999999876 35678999999888777643 479999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+. +
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------~--- 147 (263)
T PRK09072 86 NNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---------------P--- 147 (263)
T ss_pred ECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---------------C---
Confidence 9998652111 11223455678889999999999998752 2 368888876432110 0
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 148 ~~~~Y~~sK~a~~~~~ 163 (263)
T PRK09072 148 GYASYCASKFALRGFS 163 (263)
T ss_pred CccHHHHHHHHHHHHH
Confidence 2357999999887663
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.1e-10 Score=112.92 Aligned_cols=124 Identities=15% Similarity=0.097 Sum_probs=93.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc--CCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV--RPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~--~~d~Vih~a~~ 429 (684)
.+++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. .+|.+||.||.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 479999999999999999999999876 45678999999999998874 47899999885
Q ss_pred cCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecce-eeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 430 TGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 430 ~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
..... .....+.....+++|+.++.++++++... +.++|++||.. .++ .. ....|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------------------~~-~~~~Y~ 142 (240)
T PRK06101 82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------------------LP-RAEAYG 142 (240)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------------------CC-CCchhh
Confidence 41000 01122344578999999999999999863 45788888863 221 01 335799
Q ss_pred hhhHhHhhhh
Q 035631 505 KTKAMVTFLS 514 (684)
Q Consensus 505 ~sK~~~E~~~ 514 (684)
.+|...+.+.
T Consensus 143 asK~a~~~~~ 152 (240)
T PRK06101 143 ASKAAVAYFA 152 (240)
T ss_pred HHHHHHHHHH
Confidence 9999998774
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.2e-10 Score=114.92 Aligned_cols=127 Identities=16% Similarity=0.116 Sum_probs=93.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.+++|||||+|.||.+++++|+++|++| ..+.+|+++.+++..+++.. ++|+
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 85 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV 85 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence 4589999999999999999999999865 45678999999888777654 4799
Q ss_pred EEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+||..... ..+.........+++|+.++..+++++.. .+.++|++||...+.+.
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 148 (272)
T PRK08589 86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD----------------- 148 (272)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC-----------------
Confidence 99999975211 11222334457788999999877777664 34579999997544211
Q ss_pred CCCCChhhhhhHhHhhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~ 515 (684)
. ....|+.+|...+.+..
T Consensus 149 ~-~~~~Y~asKaal~~l~~ 166 (272)
T PRK08589 149 L-YRSGYNAAKGAVINFTK 166 (272)
T ss_pred C-CCchHHHHHHHHHHHHH
Confidence 1 23579999999987743
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.5e-10 Score=109.81 Aligned_cols=128 Identities=17% Similarity=0.123 Sum_probs=95.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc---CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV---RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~---~~d~Vih~a~~~ 430 (684)
++++||||+|+||.+++++|+++|++| .++.+|+++.+.+.++++.. ++|+|||+|+..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~ 81 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY 81 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence 489999999999999999999999876 45788999999998875443 589999999865
Q ss_pred CCCC---ccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecce-eeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 431 GRPN---VDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 431 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
.... ...+.+.....+++|+.++.++++++... +.+++++||.. +++.. +.. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~~~-~~~~ 145 (222)
T PRK06953 82 GPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------------TGT-TGWL 145 (222)
T ss_pred cCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------------cCC-Cccc
Confidence 2111 12234566789999999999999999752 23688888864 44311 111 2347
Q ss_pred hhhhhHhHhhhhh
Q 035631 503 YSKTKAMVTFLSY 515 (684)
Q Consensus 503 Y~~sK~~~E~~~~ 515 (684)
|+.+|...+.+..
T Consensus 146 Y~~sK~a~~~~~~ 158 (222)
T PRK06953 146 YRASKAALNDALR 158 (222)
T ss_pred cHHhHHHHHHHHH
Confidence 9999999987643
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-10 Score=114.34 Aligned_cols=127 Identities=19% Similarity=0.143 Sum_probs=93.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|.||.+++++|.++|++| .++.+|++|.+++.++++.. ++|
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 88 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALT 88 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999865 34678999999888877653 479
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||....+. .+...+.....+++|+.++..+++++.. .+ .++|++||..-+.+..
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------- 153 (254)
T PRK06114 89 LAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNR--------------- 153 (254)
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC---------------
Confidence 9999999752111 1223455668899999999888887653 33 3699998875332110
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. +...|+.+|...+.+.
T Consensus 154 ~~-~~~~Y~~sKaa~~~l~ 171 (254)
T PRK06114 154 GL-LQAHYNASKAGVIHLS 171 (254)
T ss_pred CC-CcchHHHHHHHHHHHH
Confidence 00 2367999999888773
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.2e-10 Score=114.59 Aligned_cols=127 Identities=19% Similarity=0.191 Sum_probs=93.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.++++||||+|+||.+++++|+++|++| .++.+|+++.++++.+++.. ++|+
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3589999999999999999999999876 35678999999998887764 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|||+||...... .+...+..+..+++|+.++.++++++... ..++|++||+.... . +.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~--------------~~ 149 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM--V--------------AD 149 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc--c--------------CC
Confidence 999999652111 12223444567999999999999987642 23699998863210 0 11
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 150 ~-~~~~Y~~sK~a~~~~~ 166 (263)
T PRK08226 150 P-GETAYALTKAAIVGLT 166 (263)
T ss_pred C-CcchHHHHHHHHHHHH
Confidence 1 3457999999988773
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-10 Score=115.68 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=94.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||+|.||.+++++|.++|++| ..+.+|++|.+++.++++.+ ++|+|
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~v 89 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVV 89 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 489999999999999999999999876 22348999999998887653 58999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
||+||...... .+...+.....+++|+.++.++++++... +.++|++||...+.+. .
T Consensus 90 I~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~- 151 (296)
T PRK05872 90 VANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-----------------P- 151 (296)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-----------------C-
Confidence 99999752111 12223444678899999999999998642 3479999998655311 1
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 152 ~~~~Y~asKaal~~~~ 167 (296)
T PRK05872 152 GMAAYCASKAGVEAFA 167 (296)
T ss_pred CchHHHHHHHHHHHHH
Confidence 3357999999998774
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=114.89 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=92.2
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||++|+||.+++++|+++|++| .++.+|++|.+++.++++.. .+|+|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999999999999865 45678999999988877654 57999
Q ss_pred EEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||+|+..... -.+.........+++|+.++..+++++.. .+ .++|++||.....+. +
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~------------- 145 (254)
T TIGR02415 82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---P------------- 145 (254)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC---C-------------
Confidence 9999865211 11223345567899999999888777764 22 368888886433111 0
Q ss_pred CCCCChhhhhhHhHhhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~ 515 (684)
..+.|+.+|...+.+..
T Consensus 146 --~~~~Y~~sK~a~~~~~~ 162 (254)
T TIGR02415 146 --ILSAYSSTKFAVRGLTQ 162 (254)
T ss_pred --CCcchHHHHHHHHHHHH
Confidence 34689999999987743
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.4e-10 Score=108.70 Aligned_cols=128 Identities=10% Similarity=0.047 Sum_probs=94.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~ 426 (684)
++++|||||+|.||.+++++|+++|++| .++.+|+.|.+++..+++.. ++|++||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 4589999999999999999999999976 34678999999988877664 48999999
Q ss_pred ceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C---CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 427 AGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N---VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 427 a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~---~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
||..... ..+...+.....+++|+.++..+.+++... + .++|++||..... +..
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~~~- 143 (236)
T PRK06483 82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------------GSD- 143 (236)
T ss_pred CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------------CCC-
Confidence 9864211 112224556788999999999887777652 2 3688888763221 111
Q ss_pred CCChhhhhhHhHhhhhhH
Q 035631 499 TRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~ 516 (684)
....|+.+|...+.+...
T Consensus 144 ~~~~Y~asKaal~~l~~~ 161 (236)
T PRK06483 144 KHIAYAASKAALDNMTLS 161 (236)
T ss_pred CCccHHHHHHHHHHHHHH
Confidence 335799999999987443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.5e-10 Score=105.23 Aligned_cols=123 Identities=22% Similarity=0.253 Sum_probs=93.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHh----c-CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKR----V-RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~----~-~~d~Vi 424 (684)
+.++|||||+-||.++++.|.++|++| .....|++|.++++.+++. + ++|++|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv 86 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV 86 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEE
Confidence 579999999999999999999999976 4567899999997666543 2 479999
Q ss_pred Ecceec-CCCCccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecce-eeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGIT-GRPNVDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|-||.. +.+-.....++....+++|+.|..+..++..- .+. ++|.+||.. .| + + +
T Consensus 87 NNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------~------y----~-- 148 (246)
T COG4221 87 NNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------P------Y----P-- 148 (246)
T ss_pred ecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------c------C----C--
Confidence 999977 22222333456678999999999998888763 333 799999984 11 0 0 1
Q ss_pred CCCChhhhhhHhHhhh
Q 035631 498 FTRSFYSKTKAMVTFL 513 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~ 513 (684)
-.+.|+.+|.....+
T Consensus 149 -~~~vY~ATK~aV~~f 163 (246)
T COG4221 149 -GGAVYGATKAAVRAF 163 (246)
T ss_pred -CCccchhhHHHHHHH
Confidence 236799999988765
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=9e-10 Score=113.54 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=91.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++|+||||+|.||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~ 88 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT 88 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 479999999999999999999999876 35678999999998887643 5799
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+|+...... .+...+.....+++|+.++.++.+++. +.+ .++|++||...|.+.
T Consensus 89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~----------------- 151 (334)
T PRK07109 89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI----------------- 151 (334)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----------------
Confidence 999998652111 122334556778888888777655554 333 369999998766411
Q ss_pred CCCCChhhhhhHhHhhh
Q 035631 497 NFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~ 513 (684)
. ....|+.+|...+.+
T Consensus 152 ~-~~~~Y~asK~a~~~~ 167 (334)
T PRK07109 152 P-LQSAYCAAKHAIRGF 167 (334)
T ss_pred C-cchHHHHHHHHHHHH
Confidence 1 235799999988766
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4e-10 Score=111.47 Aligned_cols=127 Identities=15% Similarity=0.059 Sum_probs=88.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCC--ChhHHHHHHHhc-----
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLE--DKNSLLDDMKRV----- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~--d~~~~~~~~~~~----- 418 (684)
.++++||||+|+||.+++++|+++|++|. ++.+|++ +.+++.++++..
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 91 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFG 91 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhC
Confidence 45899999999999999999999998762 3445654 445555444322
Q ss_pred CCCeEEEcceecCCCC--ccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCc
Q 035631 419 RPTHVLNAAGITGRPN--VDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
++|+|||+|+...... .+.........+++|+.++.++++++.. .+. ++|++||.....+
T Consensus 92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------- 158 (247)
T PRK08945 92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG------------- 158 (247)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC-------------
Confidence 5799999998652111 1222345567899999999999988753 333 6899988743311
Q ss_pred cCCCCCCCCChhhhhhHhHhhhhh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.. ....|+.+|...+.+..
T Consensus 159 ----~~-~~~~Y~~sK~a~~~~~~ 177 (247)
T PRK08945 159 ----RA-NWGAYAVSKFATEGMMQ 177 (247)
T ss_pred ----CC-CCcccHHHHHHHHHHHH
Confidence 01 23579999999988743
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.4e-10 Score=109.87 Aligned_cols=206 Identities=11% Similarity=0.039 Sum_probs=135.6
Q ss_pred HHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--CCCCEEEEcCccCCcCCCCCC
Q 035631 28 VTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--EGIDTIMHFAAQTHVDNSFGN 105 (684)
Q Consensus 28 l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~Vih~a~~~~~~~~~~~ 105 (684)
+++.|+++ |++|++++|+... . ...+++++|+.|.+++..+++. .++|+|||+||... ..+
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~--~---------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~ 63 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPG--M---------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAP 63 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcch--h---------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCC
Confidence 46889998 8999999996421 1 1235678999999998888754 26999999999753 245
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCC------CCCC-------CCCCCCCChhHHHHHH
Q 035631 106 SFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDI------GNPE-------ASQLLPTNPYSATKAG 171 (684)
Q Consensus 106 ~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~------~~~e-------~~~~~p~~~Y~~sK~~ 171 (684)
....+++|+.++..+++++... ....++|++||...|+.....+.. ...+ ..+..+...|+.+|..
T Consensus 64 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 143 (241)
T PRK12428 64 VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEA 143 (241)
T ss_pred HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHH
Confidence 7788999999999999998753 113699999999888632211000 0000 0234455789999999
Q ss_pred HHHHHHHHH----HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 172 AEMLVMAYH----RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 172 ~E~~~~~~~----~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.+.+.+.++ ..+++++..++||.+.++... ................+ ...+...+|+|+++..++..
T Consensus 144 ~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 144 LILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG--DFRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred HHHHHHHHHHHhhhccCeEEEEeecCCccCcccc--cchhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcCh
Confidence 999988776 335899999999999887421 11110000000000001 11246789999999998854
Q ss_pred C---CCCcEEEecCC
Q 035631 248 G---VIGHVYNVGTK 259 (684)
Q Consensus 248 ~---~~~~~~ni~~~ 259 (684)
. ..++.+.+.++
T Consensus 215 ~~~~~~G~~i~vdgg 229 (241)
T PRK12428 215 AARWINGVNLPVDGG 229 (241)
T ss_pred hhcCccCcEEEecCc
Confidence 3 23555555544
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.5e-10 Score=112.29 Aligned_cols=129 Identities=19% Similarity=0.131 Sum_probs=93.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|.||.+++++|+++|++| ..+.+|++|.+++.++++.. ++|+
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI 89 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 489999999999999999999999876 35678999999998887653 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||...... .+...+.....+++|+.++..+++++... + .++|++||....- .. .
T Consensus 90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~-------------~ 154 (253)
T PRK05867 90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHI--IN-------------V 154 (253)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcC--CC-------------C
Confidence 999999652111 12223444567789999999999988642 2 3588887763220 00 0
Q ss_pred CCCCCChhhhhhHhHhhhhhH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
+. ....|+.+|...+.+.+.
T Consensus 155 ~~-~~~~Y~asKaal~~~~~~ 174 (253)
T PRK05867 155 PQ-QVSHYCASKAAVIHLTKA 174 (253)
T ss_pred CC-CccchHHHHHHHHHHHHH
Confidence 11 235799999999877433
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.2e-09 Score=105.89 Aligned_cols=224 Identities=13% Similarity=0.049 Sum_probs=137.5
Q ss_pred CCCCEEEEEcC--CchhHHHHHHHHHhcCCCcEEEEEcCCCc-cc---------ccccCCCCC---CCCCceEEEecC--
Q 035631 10 YKPKKILITGA--AGFIGSHVTNRLIKNYPDYEIVALDKLDY-CS---------SLKNLHPSR---ASPNFKFLKGDI-- 72 (684)
Q Consensus 10 ~~~~~VlItGa--tG~iG~~l~~~L~~~~~g~~V~~~~r~~~-~~---------~~~~l~~~~---~~~~~~~~~~Dl-- 72 (684)
+.+|++||||| +.-||.++++.|.+. |.+|++ .|... .. ++....... .......+.+|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 56789999999 799999999999999 899988 44211 00 000000000 011245677888
Q ss_pred CCHH------------------HHHHhhc----c-CCCCEEEEcCccCC------cCCCCCChHHHHHHHHHHHHHHHHH
Q 035631 73 TCAD------------------LMNYLLV----S-EGIDTIMHFAAQTH------VDNSFGNSFEFTNNNIYGTHVLLEA 123 (684)
Q Consensus 73 ~d~~------------------~~~~~~~----~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~ 123 (684)
.+.+ ++..++. . .++|++||+||... ...+.+++...+++|+.++..+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 2222 4343332 1 36899999997421 1233446667889999999998887
Q ss_pred HHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeC
Q 035631 124 CKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT-NPYSATKAGAEMLVMAYHRSY----GLPTITTRGNNVYG 197 (684)
Q Consensus 124 ~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G 197 (684)
+... ..-.++|++||....-.. ... ..|+.+|+..+.+.+.++.+. ++++..+-||++-.
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~~--------------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T 229 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERII--------------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGS 229 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCCC--------------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccC
Confidence 7542 112689999986542110 112 269999999999998887653 68899999998866
Q ss_pred CCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 198 PNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...................+ + ..+...+|++.+++.++... ..++.+.+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~p--l-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 230 RAAKAIGFIDDMIEYSYANAP--L-------QKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred chhhcccccHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 532100001121111111111 1 12356899999999998642 24566666544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-10 Score=113.68 Aligned_cols=126 Identities=17% Similarity=0.266 Sum_probs=92.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhcC---------C
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRVR---------P 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~~---------~ 420 (684)
+++|||||+|+||++++++|+++|++| .++.+|++|.+++..+++... +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS 81 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence 489999999999999999999999865 467899999999988876541 2
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+++||+||.... +-.+.+.+.....+++|+.++..+++.+.. .+ .++|++||...+.
T Consensus 82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------------- 146 (251)
T PRK06924 82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN--------------- 146 (251)
T ss_pred eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC---------------
Confidence 278999986521 111334456667889999997777666553 22 3699999975432
Q ss_pred CCCCCCCCChhhhhhHhHhhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
+.. +...|+.+|...+.+..
T Consensus 147 --~~~-~~~~Y~~sKaa~~~~~~ 166 (251)
T PRK06924 147 --PYF-GWSAYCSSKAGLDMFTQ 166 (251)
T ss_pred --CCC-CcHHHhHHHHHHHHHHH
Confidence 112 45689999999998743
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.3e-10 Score=110.32 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=89.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceecC--CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITG--RP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~--~~ 433 (684)
++++||||+|+||.+++++|+++|++| .++.+|+.+. ++++++.. ++|+|||+||... .+
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD--LEPLFDWVPSVDILCNTAGILDDYKP 83 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH--HHHHHHhhCCCCEEEECCCCCCCCCC
Confidence 589999999999999999999999976 3455666665 45555443 5799999998541 11
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
..+...+.....+++|+.++.++++++... + .++|++||...+.+. . ....|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~-~~~~Y~~sK~ 145 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----------------G-GGAAYTASKH 145 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------------C-CCcccHHHHH
Confidence 223344566788999999999999998742 2 369999987544211 0 2357999999
Q ss_pred hHhhhh
Q 035631 509 MVTFLS 514 (684)
Q Consensus 509 ~~E~~~ 514 (684)
..+.+.
T Consensus 146 a~~~~~ 151 (235)
T PRK06550 146 ALAGFT 151 (235)
T ss_pred HHHHHH
Confidence 888763
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-09 Score=95.26 Aligned_cols=220 Identities=15% Similarity=0.097 Sum_probs=143.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
+.+..+||||+.-||+++++.|.++ |.+|.+.+++...... ..........-..+.+|+.+..++...++. .
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~a-ta~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEA-TAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHH-HHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 4477899999999999999999999 8999999886421111 111111123456678999998887664421 3
Q ss_pred CCCEEEEcCccCC----cCCCCCChHHHHHHHHHHHHHHHHHHHhc----C-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTH----VDNSFGNSFEFTNNNIYGTHVLLEACKLT----G-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++++++|||+.. .....++++..+.+|+.++-.+.+++.+. + ..-++|.+||.---=.+
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN----------- 158 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN----------- 158 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc-----------
Confidence 7999999999864 34555678889999999988777766543 1 12389999995321111
Q ss_pred CCCCCCChhHHHHHHH----HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 157 SQLLPTNPYSATKAGA----EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~----E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
...+.|+++|.-. ....++.++ .++++..+-||.|--|.. ...-+..+..+...-|+..++
T Consensus 159 ---~GQtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT--~~mp~~v~~ki~~~iPmgr~G--------- 223 (256)
T KOG1200|consen 159 ---FGQTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMT--EAMPPKVLDKILGMIPMGRLG--------- 223 (256)
T ss_pred ---ccchhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhh--hhcCHHHHHHHHccCCccccC---------
Confidence 1123477666322 222333333 389999999999988753 233445566665554444333
Q ss_pred cHHHHHHHHHHHHhcCC---CCcEEEecCC
Q 035631 233 YCADVAEAFDVILHRGV---IGHVYNVGTK 259 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~---~~~~~ni~~~ 259 (684)
..+|+|..++.+..... .+..+.+.+|
T Consensus 224 ~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 224 EAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred CHHHHHHHHHHHhccccccccceeEEEecc
Confidence 46999999988885422 3566777654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.6e-10 Score=98.75 Aligned_cols=168 Identities=17% Similarity=0.176 Sum_probs=119.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc---c--C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV---S--E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~--~ 85 (684)
.+.+||||||+..||..|+++|++. |-+|++..|+. ..+... ....+.+....+|+.|.+..+++++ + -
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e--~~L~e~--~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL--GNTVIICGRNE--ERLAEA--KAENPEIHTEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcH--HHHHHH--HhcCcchheeeecccchhhHHHHHHHHHhhCC
Confidence 4568999999999999999999999 89999999974 222221 1234678888999999886554431 1 2
Q ss_pred CCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
..+++||+||+... ....++......+|+.++..|..+...+ .+...+|.+||.-.|-+-..
T Consensus 78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~--------- 148 (245)
T COG3967 78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS--------- 148 (245)
T ss_pred chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc---------
Confidence 68899999997532 2222334556789999998887766432 22578999999766533222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCC
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHR---SYGLPTITTRGNNVYGP 198 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~ 198 (684)
...|..+|+....+-..+.. ..++.++=+-|+.|--+
T Consensus 149 -----~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 149 -----TPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred -----cccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 23599999998877655543 34677888888888654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-10 Score=111.66 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=95.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|.||.+++++|+++|++| .++.+|++|.+++..++... ++|+
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI 90 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 479999999999999999999999865 45779999999998888753 4799
Q ss_pred EEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecce-eeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGC-IYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||..... ..+...+.....+++|+.++..+++++.. .+ .++|++||.. .++
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 152 (265)
T PRK07097 91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG------------------ 152 (265)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC------------------
Confidence 99999976211 12333456678888999999988888764 22 4799998863 221
Q ss_pred CCCCCChhhhhhHhHhhhhhH
Q 035631 496 PNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
.. +...|+.+|...+.+...
T Consensus 153 ~~-~~~~Y~~sKaal~~l~~~ 172 (265)
T PRK07097 153 RE-TVSAYAAAKGGLKMLTKN 172 (265)
T ss_pred CC-CCccHHHHHHHHHHHHHH
Confidence 11 346899999999877433
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.4e-10 Score=112.02 Aligned_cols=125 Identities=14% Similarity=0.070 Sum_probs=89.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|.||.++++.|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 88 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRV 88 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCc
Confidence 489999999999999999999999865 35567999999988887754 57
Q ss_pred CeEEEcceecCC-------CCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCC
Q 035631 421 THVLNAAGITGR-------PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSI 488 (684)
Q Consensus 421 d~Vih~a~~~~~-------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~ 488 (684)
|++||+||..+. +..+.........+++|+.+...+.+.+.. .+ .++|++||...+. +
T Consensus 89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~----- 158 (260)
T PRK08416 89 DFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV-----Y----- 158 (260)
T ss_pred cEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc-----C-----
Confidence 999999985421 001112234456788888887776666543 22 3799999864221 0
Q ss_pred CCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 489 GFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 489 ~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. ....|+.+|...+.+.
T Consensus 159 -------~~-~~~~Y~asK~a~~~~~ 176 (260)
T PRK08416 159 -------IE-NYAGHGTSKAAVETMV 176 (260)
T ss_pred -------CC-CcccchhhHHHHHHHH
Confidence 00 2347999999998874
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.8e-10 Score=111.41 Aligned_cols=208 Identities=16% Similarity=0.105 Sum_probs=131.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|+|||||||||+|++++++|+++|++| ++..+|+.+...+...+++. |.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~--~~~~~i~~~~---- 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGV--DGVLLISGLL---- 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccc--cEEEEEeccc----
Confidence 689999999999999999999999977 57778899999999999998 9999988743
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ... ...........+..+++.....++++.|....- . . ....|..+|...|...
T Consensus 75 -~---~~~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~----------------~---~-~~~~~~~~~~~~e~~l 129 (275)
T COG0702 75 -D---GSD-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD----------------A---A-SPSALARAKAAVEAAL 129 (275)
T ss_pred -c---ccc-chhHHHHHHHHHHHHHhcCCceEEEEeccCCCC----------------C---C-CccHHHHHHHHHHHHH
Confidence 1 111 222333333344444444111246666665111 0 1 3468999999997653
Q ss_pred hHHhhhhhhhhhh-hhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 515 YLEIFVLVICIEC-LINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 515 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
..... +..+.+ ...+.+..... .........+....+.+ .. +++..+|+++++..++
T Consensus 130 ~~sg~--~~t~lr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~-----------------~~i~~~d~a~~~~~~l 187 (275)
T COG0702 130 RSSGI--PYTTLRRAAFYLGAGAAF-IEAAEAAGLPVIPRGIG--RL-----------------SPIAVDDVAEALAAAL 187 (275)
T ss_pred HhcCC--CeEEEecCeeeeccchhH-HHHHHhhCCceecCCCC--ce-----------------eeeEHHHHHHHHHHHh
Confidence 33211 211111 11111100000 00111111111111111 11 5599999999999999
Q ss_pred hcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCc
Q 035631 594 RRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFN 632 (684)
Q Consensus 594 ~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 632 (684)
..+ ...+|.+++++..+..+++..+....|++....+.+
T Consensus 188 ~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~~~~ 228 (275)
T COG0702 188 DAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGLIPEA 228 (275)
T ss_pred cCCcccCcEEEccCCceecHHHHHHHHHHHhCCcceeeCCc
Confidence 876 566999999999999999999999999877764433
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.8e-09 Score=109.39 Aligned_cols=208 Identities=20% Similarity=0.229 Sum_probs=124.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHH-HHHHhhccC--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCAD-LMNYLLVSE-- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~-~~~~~~~~~-- 85 (684)
+.+++|||+||||.+|+-+++.|+++ |+.|.++.|... ....+.. .........+..|..... .+..+....
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~--~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQ--KAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChh--hhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 34578999999999999999999999 899999999642 2222211 112334455555544433 333333222
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC---C
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP---T 162 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p---~ 162 (684)
...+++-+++-.+-. ++...-..+...+++|+++||+.+| ++|++++||++.-..+. +... .
T Consensus 153 ~~~~v~~~~ggrp~~---ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~-----------~~~~~~~~ 217 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEE---EDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQ-----------PPNILLLN 217 (411)
T ss_pred cceeEEecccCCCCc---ccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCC-----------Cchhhhhh
Confidence 244666666543321 1122334577889999999999998 99999999865422111 1111 1
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
..+-.+|..+|++++ +.+++++|+|++...-..... ... .....+...-.++. --.+...|+|+.++
T Consensus 218 ~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~-~~~------~~~~~~~~~~~~~~--~~~i~r~~vael~~ 284 (411)
T KOG1203|consen 218 GLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQ-REV------VVDDEKELLTVDGG--AYSISRLDVAELVA 284 (411)
T ss_pred hhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCc-cee------cccCcccccccccc--ceeeehhhHHHHHH
Confidence 134467778887774 569999999999765432110 000 00111111111111 13578899999999
Q ss_pred HHHhcCC
Q 035631 243 VILHRGV 249 (684)
Q Consensus 243 ~~~~~~~ 249 (684)
.++.++.
T Consensus 285 ~all~~~ 291 (411)
T KOG1203|consen 285 KALLNEA 291 (411)
T ss_pred HHHhhhh
Confidence 8887654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-09 Score=109.75 Aligned_cols=187 Identities=16% Similarity=0.138 Sum_probs=131.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc--ccccCCCCCCCCCceEEEecCCCHHHHHHhhc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPNFKFLKGDITCADLMNYLLV--- 83 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 83 (684)
....+.++|||||..||.++++.|..+ |.+|+...|+.... ....+........+.++++|+.+..++..+..
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 334579999999999999999999999 89999999975211 11222223345668889999999988765532
Q ss_pred --cCCCCEEEEcCccCCcCC--CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 84 --SEGIDTIMHFAAQTHVDN--SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 84 --~~~~d~Vih~a~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
....|++|+.||++..+. ..+..+..+.+|..|...|.+.. +.+. ..|+|++||..- +... ....-..+
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~-~~~~l~~~ 186 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKI-DLKDLSGE 186 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCcc-chhhccch
Confidence 347999999999876544 33456788899998877666554 5544 389999999654 1110 11000111
Q ss_pred CCC-CCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCC
Q 035631 156 ASQ-LLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQ 200 (684)
Q Consensus 156 ~~~-~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~ 200 (684)
... ......|+.||.+...+..++.++. ++....+.||.+...+.
T Consensus 187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l 234 (314)
T KOG1208|consen 187 KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL 234 (314)
T ss_pred hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence 111 2222359999999999998888775 68899999999988754
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=6e-10 Score=111.55 Aligned_cols=126 Identities=17% Similarity=0.202 Sum_probs=96.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGIT 430 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~ 430 (684)
.++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+||..
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGIN 88 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 3589999999999999999999999976 35678999999998887754 579999999965
Q ss_pred CCCC----------ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 431 GRPN----------VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 431 ~~~~----------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
.... .....+.....+++|+.++..+++++... + .++|++||...+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 152 (266)
T PRK06171 89 IPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---------------- 152 (266)
T ss_pred CCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------------
Confidence 2110 11233455678999999999999998753 2 369999987554211
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 153 -~-~~~~Y~~sK~a~~~l~ 169 (266)
T PRK06171 153 -E-GQSCYAATKAALNSFT 169 (266)
T ss_pred -C-CCchhHHHHHHHHHHH
Confidence 1 3468999999998774
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.2e-11 Score=105.64 Aligned_cols=274 Identities=11% Similarity=0.008 Sum_probs=165.2
Q ss_pred EEEEEcCCcchhHHHHH-----HHHhcC----CeEeeeeccCCChh-HHHHH-HHhcC--CCeEEEcceec-CCCCcccc
Q 035631 373 KFLIYGKTGWIGGLLGK-----YCKDKG----IAFEFGTGRLEDKN-SLLDD-MKRVR--PTHVLNAAGIT-GRPNVDWC 438 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~-----~L~~~g----~~v~~~~~d~~d~~-~~~~~-~~~~~--~d~Vih~a~~~-~~~~~~~~ 438 (684)
+.++-+++|+|+.+|.. ++-+.+ |+|+.+...-.... .+.++ +.+.. -+..+++++.. .-|...|+
T Consensus 14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~~~Gip~sc~a~vna~g~n~l~P~rRWs 93 (315)
T KOG3019|consen 14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELDFPGIPISCVAGVNAVGNNALLPIRRWS 93 (315)
T ss_pred cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhcCCCCceehHHHHhhhhhhccCchhhcC
Confidence 67888999999988877 544445 77766654422111 11111 11110 13344444433 23345788
Q ss_pred ccchhhHhhhchhhhHHHHHHHHHcC--Ce-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhh
Q 035631 439 ESHRVETIRTNVMGTLTLADVCKEKN--VL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 439 ~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.....++....+..|..|+++..... .| +|.+|..++|-+..... ++|+++.. -.+......+..|..+.
T Consensus 94 p~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~e------Y~e~~~~q-gfd~~srL~l~WE~aA~ 166 (315)
T KOG3019|consen 94 PEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQE------YSEKIVHQ-GFDILSRLCLEWEGAAL 166 (315)
T ss_pred HHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccc------cccccccC-ChHHHHHHHHHHHHHhh
Confidence 88888999999999999999999864 34 99999999997544444 88888766 55555555555554333
Q ss_pred HHhhhhhhhhhhhhhhhHH--HHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 516 LEIFVLVICIECLINFQVE--GLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
......++.+.|+..+-+. |......-....+. -...|+|.+...| ||++|+|..+.+++
T Consensus 167 ~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~-GGPlGsG~Q~fpW-----------------IHv~DL~~li~~al 228 (315)
T KOG3019|consen 167 KANKDVRVALIRIGVVLGKGGGALAMMILPFQMGA-GGPLGSGQQWFPW-----------------IHVDDLVNLIYEAL 228 (315)
T ss_pred ccCcceeEEEEEEeEEEecCCcchhhhhhhhhhcc-CCcCCCCCeeeee-----------------eehHHHHHHHHHHH
Confidence 3223333444444433211 11111111101111 0122455555555 99999999999999
Q ss_pred hcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCC-----CCCcCCchhh-hhcCC-CchhHH
Q 035631 594 RRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPR-----SNNHMDVTKL-KKEFP-EVLSIK 665 (684)
Q Consensus 594 ~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~kl-~~~~~-~~~~~~ 665 (684)
+++ ..|+.|-+.|.+++..|+++.+.++++++..+ +++..-......+.+ ....+-+.|. +++|+ .++...
T Consensus 229 e~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~-pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk 307 (315)
T KOG3019|consen 229 ENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWL-PVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVK 307 (315)
T ss_pred hcCCCCceecccCCCccchHHHHHHHHHHhCCCccc-CCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHH
Confidence 996 78999999999999999999999999875433 333221111110000 1222334444 78888 688888
Q ss_pred HHHHHHH
Q 035631 666 DSIIKYV 672 (684)
Q Consensus 666 ~~l~~~~ 672 (684)
++|++.+
T Consensus 308 ~Al~~i~ 314 (315)
T KOG3019|consen 308 DALRAIM 314 (315)
T ss_pred HHHHHHh
Confidence 8888754
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.4e-10 Score=111.34 Aligned_cols=125 Identities=17% Similarity=0.093 Sum_probs=88.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
|++|||||+|.||..++++|+++|+.| .++.+|++|.+++.++++.. ++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 699999999999999999999999876 35678999999998887643 58999
Q ss_pred EEcceecCCC---CccccccchhhHhhhchhhhHHHHHHHH-----Hc-CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 424 LNAAGITGRP---NVDWCESHRVETIRTNVMGTLTLADVCK-----EK-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 424 ih~a~~~~~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
||+||..... ..+.........+.+|+.++..+...+. +. +.++|++||...+.
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------------- 143 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------------- 143 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------------
Confidence 9999964110 1111122334556788877665554432 22 24799999986542
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. +...|+.+|...+.+.
T Consensus 144 ~~~-~~~~y~~sKaa~~~~~ 162 (259)
T PRK08340 144 PMP-PLVLADVTRAGLVQLA 162 (259)
T ss_pred CCC-CchHHHHHHHHHHHHH
Confidence 111 3467999999888773
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-09 Score=103.78 Aligned_cols=203 Identities=13% Similarity=0.027 Sum_probs=137.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+..||||||++.+|+.++.+|+++ |.++++.|.+..... +.........+++.+.+|+.+.+++.+...+ .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~-etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNE-ETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchH-HHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999 788889988753211 1111111113688999999999887655321 3
Q ss_pred CCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|++||.||.......++ .-+..+++|+.+.-....+. .+.+ -.++|.++|...+-..
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~------------ 180 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGP------------ 180 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCC------------
Confidence 7999999999876544333 33457789988776655544 4433 5899999997654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh------cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS------YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.....|..||.++.-+.+.+..+ .+++.+.+.|+.+= .+. +.. ..+ -....+.
T Consensus 181 --~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tgm---------f~~---~~~------~~~l~P~ 239 (300)
T KOG1201|consen 181 --AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TGM---------FDG---ATP------FPTLAPL 239 (300)
T ss_pred --ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-ccc---------cCC---CCC------CccccCC
Confidence 22346999999888777666433 26778888887653 111 100 111 1133567
Q ss_pred ccHHHHHHHHHHHHhcCCC
Q 035631 232 LYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~~ 250 (684)
+..+.+|+.++.++.....
T Consensus 240 L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 240 LEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred CCHHHHHHHHHHHHHcCCc
Confidence 8899999999999876543
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.4e-10 Score=110.37 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=93.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++++||||+|.||.++++.|+++|+.| .++.+|++|.+++.++++.. ++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 489999999999999999999999865 35778999999998877654 5799
Q ss_pred EEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+||.... +..+...+.....+++|+.++.++++++.+ .+ .++|++||..-+. +
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------~ 144 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-----------------A 144 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------------C
Confidence 9999985421 111333445577899999999999999953 22 3588888773221 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. ....|+.+|...+.+.
T Consensus 145 ~~-~~~~Y~~sKaa~~~~~ 162 (252)
T PRK07677 145 GP-GVIHSAAAKAGVLAMT 162 (252)
T ss_pred CC-CCcchHHHHHHHHHHH
Confidence 00 2247999999988763
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-10 Score=105.37 Aligned_cols=164 Identities=19% Similarity=0.208 Sum_probs=110.9
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCc-ccc-cccCCCC-CCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY-CSS-LKNLHPS-RASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~-~~~-~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
++|||||+|-||..++++|.+++ ..+|+.+.|+.. ... ...+... .....+.++.+|+.|.+++.+++...
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 58999999999999999999996 569999999731 111 1111111 12357889999999999999887543
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccc-ccCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEV-YGETDMESDIGNPEASQLL 160 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~~~~~ 160 (684)
.++.|||+|+..... ...+.....+...+.++.+|.++..... +..||.+||... +|...
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g-------------- 145 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG-------------- 145 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT--------------
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc--------------
Confidence 678899999975432 2222344567889999999999998865 899999999764 54432
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCce
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNV 195 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v 195 (684)
...|+......+.+.+.... .+.+++.+..+.+
T Consensus 146 -q~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W 178 (181)
T PF08659_consen 146 -QSAYAAANAFLDALARQRRS-RGLPAVSINWGAW 178 (181)
T ss_dssp -BHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred -hHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence 24699999999998876644 5888888876644
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.4e-10 Score=109.88 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=95.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++++||||+|.||..+++.|.++|++| .++.+|+++.+++..+++.+ ++
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 89 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL 89 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999876 23567999999888777654 57
Q ss_pred CeEEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||.... +..+...+.....+.+|+.++.++++++.. .+ .++|++||...+.+.
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------------- 154 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV--------------- 154 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC---------------
Confidence 999999996411 112334556678899999999999998853 33 369999998555311
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 155 --~-~~~~Y~~sK~a~~~~~ 171 (257)
T PRK09242 155 --R-SGAPYGMTKAALLQMT 171 (257)
T ss_pred --C-CCcchHHHHHHHHHHH
Confidence 1 3467999999988774
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1e-09 Score=111.95 Aligned_cols=125 Identities=15% Similarity=0.100 Sum_probs=93.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~----~~d~ 422 (684)
++++||||+|+||.+++++|+++|..| .++.+|++|.+++..+++.. ++|+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~ 92 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDI 92 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 489999999999999999999999765 35678999999888877652 5799
Q ss_pred EEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc------------CCeEEEEecceeeecCCCCCCCCCCC
Q 035631 423 VLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK------------NVLLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 423 Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~------------~~~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
+||+||....... +.........+++|+.++.++++++..+ ..++|++||...+.+.
T Consensus 93 li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 162 (306)
T PRK07792 93 VVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---------- 162 (306)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------
Confidence 9999997632111 2234456678999999999999987531 1368999887543211
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 163 -------~-~~~~Y~asKaal~~l~ 179 (306)
T PRK07792 163 -------V-GQANYGAAKAGITALT 179 (306)
T ss_pred -------C-CCchHHHHHHHHHHHH
Confidence 1 2347999999998773
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.6e-10 Score=108.90 Aligned_cols=124 Identities=15% Similarity=0.133 Sum_probs=85.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC-CeE--------------------------eeeeccCCChhHHHHHHHhc----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG-IAF--------------------------EFGTGRLEDKNSLLDDMKRV----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g-~~v--------------------------~~~~~d~~d~~~~~~~~~~~----~~ 420 (684)
++|+||||+|.||.+++++|+++| ++| +++.+|++|.+++.++++.. ++
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i 88 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV 88 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence 589999999999999999999985 554 45678898888876665532 58
Q ss_pred CeEEEcceecCCCCcccc-ccchhhHhhhchhhhHHH----HHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPNVDWC-ESHRVETIRTNVMGTLTL----ADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~-~~~~~~~~~~nv~~~~~l----l~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||++|..+.....+. .......+++|+.++..+ +..+.+.+ .++|++||...+.+
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~---------------- 152 (253)
T PRK07904 89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV---------------- 152 (253)
T ss_pred CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC----------------
Confidence 999999986531111111 111224689999988874 55555554 47999999743210
Q ss_pred CCCCCCChhhhhhHhHhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~ 513 (684)
.. +...|+.||+....+
T Consensus 153 -~~-~~~~Y~~sKaa~~~~ 169 (253)
T PRK07904 153 -RR-SNFVYGSTKAGLDGF 169 (253)
T ss_pred -CC-CCcchHHHHHHHHHH
Confidence 01 335799999988765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 684 | ||||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 6e-69 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 7e-69 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 1e-64 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 4e-64 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 1e-63 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 1e-62 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 9e-50 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 1e-30 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 2e-27 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 3e-25 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 4e-24 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 9e-24 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 1e-23 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-23 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-23 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 2e-23 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-23 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-23 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 3e-23 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 4e-23 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 5e-23 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 6e-23 | ||
| 2pk3_A | 321 | Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose | 9e-23 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 9e-23 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 2e-22 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 2e-22 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 2e-22 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 3e-22 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 4e-22 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 5e-22 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 8e-22 | ||
| 1orr_A | 347 | Crystal Structure Of Cdp-tyvelose 2-epimerase Compl | 1e-19 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 2e-19 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 2e-15 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 4e-15 | ||
| 3m2p_A | 311 | The Crystal Structure Of Udp-N-Acetylglucosamine 4- | 8e-15 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 1e-13 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-13 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 3e-13 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 6e-13 | ||
| 1wvg_A | 359 | Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal | 2e-12 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 2e-12 | ||
| 2pzk_A | 330 | Crystal Structure Of The Bordetella Bronchiseptica | 1e-11 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 8e-11 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 8e-11 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 2e-10 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 2e-10 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 3e-10 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 5e-10 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 9e-10 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 1e-09 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 1e-09 | ||
| 1db3_A | 372 | E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | 2e-09 | ||
| 1rkx_A | 357 | Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose | 9e-09 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 9e-09 | ||
| 3slg_A | 372 | Crystal Structure Of Pbgp3 Protein From Burkholderi | 2e-08 | ||
| 1t2a_A | 375 | Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr | 3e-08 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 7e-08 | ||
| 1u9j_A | 358 | Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl | 1e-07 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 2e-07 | ||
| 2bll_A | 345 | Apo-Structure Of The C-Terminal Decarboxylase Domai | 2e-07 | ||
| 1z7b_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 3e-07 | ||
| 1z75_A | 358 | Crystal Structure Of Arna Dehydrogenase (decarboxyl | 3e-07 | ||
| 1z74_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 3e-07 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 4e-07 | ||
| 2gn4_A | 344 | Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd | 4e-07 | ||
| 1z7e_A | 660 | Crystal Structure Of Full Length Arna Length = 660 | 6e-07 | ||
| 4f6l_B | 508 | Crystal Structure Of Aureusimine Biosynthetic Clust | 9e-07 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 1e-06 | ||
| 1n7g_A | 381 | Crystal Structure Of The Gdp-mannose 4,6-dehydratas | 2e-06 | ||
| 3rft_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 4e-06 | ||
| 4f6c_A | 427 | Crystal Structure Of Aureusimine Biosynthetic Clust | 4e-06 | ||
| 1rpn_A | 335 | Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase | 5e-06 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 1e-05 | ||
| 3sc6_A | 287 | 2.65 Angstrom Resolution Crystal Structure Of Dtdp- | 1e-05 | ||
| 2z1m_A | 345 | Crystal Structure Of Gdp-D-Mannose Dehydratase From | 2e-05 | ||
| 3rfx_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 3e-05 | ||
| 4id9_A | 347 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 8e-05 | ||
| 4b8z_A | 320 | Crystal Structure Of Human Gdp-l-fucose Synthase Wi | 8e-04 | ||
| 4b8w_A | 319 | Crystal Structure Of Human Gdp-L-Fucose Synthase Wi | 8e-04 |
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | Back alignment and structure |
|
| >pdb|1RKX|A Chain A, Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose 4,6- Dehydratase From Yersinia Pseudotuberculosis Length = 357 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372 | Back alignment and structure |
|
| >pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345 | Back alignment and structure |
|
| >pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344 | Back alignment and structure |
|
| >pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660 | Back alignment and structure |
|
| >pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph And Gdp-rhamnose. Length = 381 | Back alignment and structure |
|
| >pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267 | Back alignment and structure |
|
| >pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427 | Back alignment and structure |
|
| >pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|3SC6|A Chain A, 2.65 Angstrom Resolution Crystal Structure Of Dtdp-4-Dehydrorhamnose Reductase (Rfbd) From Bacillus Anthracis Str. Ames In Complex With Nadp Length = 287 | Back alignment and structure |
|
| >pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345 | Back alignment and structure |
|
| >pdb|3RFX|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens, Y136a Mutant Complexed With Nad Length = 267 | Back alignment and structure |
|
| >pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347 | Back alignment and structure |
|
| >pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320 | Back alignment and structure |
|
| >pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 397 bits (1022), Expect = e-134
Identities = 134/328 (40%), Positives = 201/328 (61%), Gaps = 13/328 (3%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+L+TG GFIGS+ +++ +PD+E++ +DKL Y S+ NL P + F+KGD+
Sbjct: 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDV 63
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+L+ L+ +D ++H AA++HVD S + F ++N+ GT+ LLE+ + R
Sbjct: 64 ADYELVKELV--RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVR 121
Query: 133 FIHVSTDEVYGETDMESDIGNP---EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
F+HVSTDEVYG DI E +L+P++PYSATKA ++MLV+ + R+Y L
Sbjct: 122 FVHVSTDEVYG------DILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASI 175
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249
TR N YGP QFPEKLIPK I+ A G ++PI+G G NVR +LY D A +++L +G
Sbjct: 176 TRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE 235
Query: 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGW 308
+YN+ +E++ L+V I L + E+ I V+DRP +D RY LD K+ R L W
Sbjct: 236 SREIYNISAGEEKTNLEVVKIILRLMG-KGEELIELVEDRPGHDLRYSLDSWKITRDLKW 294
Query: 309 KEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
+ K ++EG+K T++WY KN WW +
Sbjct: 295 RPKYTFDEGIKKTIDWYLKNEWWWKPLV 322
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 394 bits (1016), Expect = e-133
Identities = 130/330 (39%), Positives = 205/330 (62%), Gaps = 13/330 (3%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
IL+TG AGFIGS+ + ++++Y Y+I+ D L Y +L N+ + PN+ F+KG
Sbjct: 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG 82
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+I +L+ +++ + I++FAA++HVD S N F + N+ GT LLE K
Sbjct: 83 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-H 141
Query: 131 KRFIHVSTDEVYGETDMESDIGNP----EASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
+ + VSTDEVYG +G E + L P +PYS++KA A+M+ +AY+++Y LP
Sbjct: 142 IKLVQVSTDEVYG------SLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 195
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
I TR +N YGP Q+PEKLIP + A++G++LP++G+G NVR +L+ D A DV+LH
Sbjct: 196 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 255
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR- 305
+G +G VYN+G E++ ++V I TL + +K I YV DR +D RY ++ +K+K
Sbjct: 256 KGRVGEVYNIGGNNEKTNVEVVEQIITLLG-KTKKDIEYVTDRLGHDRRYAINAEKMKNE 314
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV 335
W+ K +E+GL+ T++WY+KN WW +
Sbjct: 315 FDWEPKYTFEQGLQETVQWYEKNEEWWKPL 344
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 391 bits (1007), Expect = e-132
Identities = 124/331 (37%), Positives = 187/331 (56%), Gaps = 18/331 (5%)
Query: 14 KILITGAAGFIGSHVTNRLIKN----YPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
++L+TG AGFIGSH +L+ P E++ LD L Y + NL P A P +F+
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI A L+ L G+D I+HFAA++HVD S + FT N+ GT LL+ G
Sbjct: 62 GDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG- 118
Query: 130 VKRFIHVSTDEVYGETDMESDIGNP---EASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
V R +HVST++VYG I + E+S L P +PY+A+KAG++++ AYHR+YGL
Sbjct: 119 VGRVVHVSTNQVYG------SIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLD 172
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
TR N YGP Q PEKLIP F+ + G LP++G+G+NVR +++ D ++L
Sbjct: 173 VRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA 232
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR- 305
G G +Y++G E + ++ + ++ V DR +D RY LD K++R
Sbjct: 233 GGRAGEIYHIGGGLELTNRELTGILLDSLG-ADWSSVRKVADRKGHDLRYSLDGGKIERE 291
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
LG++ + + +GL T+ WY++N WW +
Sbjct: 292 LGYRPQVSFADGLARTVRWYRENRGWWEPLK 322
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 387 bits (996), Expect = e-130
Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 17/337 (5%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ K I++TG AGFIGS+ + + N+PD + LDKL Y + NL + + G
Sbjct: 3 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVG 61
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI A+L++ L D I+H+AA++H DNS + F + N GT+ LLEA +
Sbjct: 62 DIADAELVDKLA--AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-- 117
Query: 131 KRFIHVSTDEVYGETDMESDIGNP---------EASQLLPTNPYSATKAGAEMLVMAYHR 181
RF HVSTDEVYG+ + D+ + P++PYS+TKA ++++V A+ R
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR 177
Query: 182 SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
S+G+ + +N YGP Q EK IP+ I + G + ++G G NVR +++ D +
Sbjct: 178 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQ 301
IL +G +G Y +G E++ +V I +P+ +V DR +D RY +D
Sbjct: 238 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMG-QPKDAYDHVTDRAGHDLRYAIDAS 296
Query: 302 KLKR-LGWK-EKTPWEEGLKLTLEWYKKNPHWWGDVT 336
KL+ LGW + T + EGL+ T++WY N WW
Sbjct: 297 KLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEK 333
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 379 bits (975), Expect = e-127
Identities = 140/345 (40%), Positives = 188/345 (54%), Gaps = 23/345 (6%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITG AGFIGS V +IK +V +DKL Y +L++L S + F DI
Sbjct: 2 KILITGGAGFIGSAVVRHIIK-NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
+ + + D +MH AA++HVD S F NI GT+ LLE + L
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 129 QVK---RFIHVSTDEVYG---ETDMESDIGNP----EASQLLPTNPYSATKAGAEMLVMA 178
K RF H+STDEVYG D + E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT-----IHYVQDRPFN 292
A +++ G G YN+G E+ LDV IC L ++ P+ T I YV DRP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
D RY +D K+ R LGWK +E G++ T+EWY N W +V
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVK 345
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-124
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 30/346 (8%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+LITG GF+GS++ + + +++ D L + NLH + NF+F+ GDI
Sbjct: 2 AKLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + L+ D+ H A Q + S N N+ GT LLEA +
Sbjct: 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119
Query: 133 FIHVSTDEVYG-------------ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
I+ ST++VYG T ++ G E++QL +PY +K A+ ++ Y
Sbjct: 120 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 179
Query: 180 HRSYGLPTITTRGNNVYGPNQFP---EKLIPKFILLAM-----KGQQLPIHGNGSNVRSY 231
R +GL T+ R +++YG QF + + F A+ + I GNG VR
Sbjct: 180 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 239
Query: 232 LYCADVAEAFDVILHRG--VIGHVYNVG--TKKERSVLDVAADICTLFKLEPEKTIHYVQ 287
L+ D+ + L + G+ +N+G S+L++ + + +
Sbjct: 240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDY--CNIDMRFTNLP 297
Query: 288 DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
R + + D +K+ + W K ++G++ +W
Sbjct: 298 VRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILEHH 343
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 338 bits (869), Expect = e-111
Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 27/350 (7%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
M + +++ G AGF+GS++ RL++ + ++ +D L + N+
Sbjct: 21 MPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLS-AEKINV---P 75
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVL 120
P +F + IT L+ L + D + H A +S + NN T L
Sbjct: 76 DHPAVRFSETSITDDALLASLQ--DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKL 133
Query: 121 LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVM 177
E K ++K+ ++ + E + E + N YS +K E +
Sbjct: 134 YERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSV 193
Query: 178 AYHRSYGLPTITTRGNNVYGPNQFP-------------EKLIPKFILLAMKGQQLPIHGN 224
YH+ + LPT+ R NVYGP + + P FI A+KG LP+
Sbjct: 194 YYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENG 253
Query: 225 GSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH 284
G R +++ DVA G G VYN+ + KE S+ D+A I + +
Sbjct: 254 GVATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEI--TGNNTELD 311
Query: 285 YVQDRPFND-HRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
+ RP+++ + F +K +R LG+ ++GL+ T+EW K N
Sbjct: 312 RLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLAVI 361
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 324 bits (833), Expect = e-106
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 27/324 (8%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KI +TG GF+G +V + + + L ++A ++++ D
Sbjct: 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILT---------RSIGNKAINDYEYRVSDY 51
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
T DL+N L +D ++H AA ++N T L +AC +
Sbjct: 52 TLEDLINQL---NDVDAVVHLAATRGSQGKI----SEFHDNEILTQNLYDACYENN-ISN 103
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
++ ST Y + + E LP Y +K E + Y R GL R
Sbjct: 104 IVYASTISAYSDET---SLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRF 160
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
++YG N+ +I +F A G+QL +H N R +LY D A++ L + +
Sbjct: 161 AHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG 220
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311
+N+G+ + +VA I F + + + H ++D K K L +
Sbjct: 221 TFNIGSGDALTNYEVANTINNAFGNKDNL-LVKNPNANEGIHSSYMDSSKAKELLDFSTD 279
Query: 312 TPWEEGLKLTLEWYK---KNPHWW 332
+ ++ + P W+
Sbjct: 280 YNFATAVEEIHLLMRGLDDVPLWY 303
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 292 bits (749), Expect = 1e-93
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 36/331 (10%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK--NLHPSRASPNFKFL 68
+ILITG AGFIG H+ L+ + E+ LD L + P +
Sbjct: 6 LKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELE 63
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
+ D++ + + H A+ V SF + +N+ LL C G
Sbjct: 64 ERDLS------------DVRLVYHLASHKSVPRSFKQPLD-YLDNVDSGRHLLALCTSVG 110
Query: 129 QVKRFIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
V + + ST EVYG+ D E +P + PY+A+K G EM+ A+ R+
Sbjct: 111 -VPKVVVGSTCEVYGQADTLPTPEDSPLSPRS-------PYAASKVGLEMVAGAHQRASV 162
Query: 185 LPTIT-TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
P + R NVYGP + P+ L+P+ + +LP+ G+G R + Y DV +
Sbjct: 163 APEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVA 222
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL 303
+ +R + V N G+ + SV DV L P + Q RP + D
Sbjct: 223 LANRPL-PSVVNFGSGQSLSVNDVIR---ILQATSPAAEVARKQPRPNEITEFRADTALQ 278
Query: 304 KR-LGWKE-KTPWEEGLKLTLEWYKKNPHWW 332
R +G + EEG++LTLEW++
Sbjct: 279 TRQIGERSGGIGIEEGIRLTLEWWQSRDLDD 309
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 1e-87
Identities = 66/379 (17%), Positives = 130/379 (34%), Gaps = 56/379 (14%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-----DYCSSLKNLHPSR 60
+ ++++ G G+ G L K +YE+ +D L D+ L++L P
Sbjct: 5 HHHHHHGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIA 62
Query: 61 AS------------PNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
+ + + GDI + + S D+++HF Q S +
Sbjct: 63 SIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSR 122
Query: 109 F---TNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM----------ESDIGNPE 155
+NN+ GT +L A K G+ + + T YG ++ + +
Sbjct: 123 AVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTL 182
Query: 156 ASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL---------- 205
++ Y +K + +++G+ VYG ++
Sbjct: 183 PYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242
Query: 206 -------IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL-HRGVIG--HVYN 255
+ +F + A G L ++G G R YL D + ++ + + G V+N
Sbjct: 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFN 302
Query: 256 VGTKKERSVLDVA---ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKT 312
T++ SV ++A + L+ +K +H Y KL LG +
Sbjct: 303 QFTEQ-FSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHY 361
Query: 313 PWEEGLKLTLEWYKKNPHW 331
+ L L + +
Sbjct: 362 LSDSLLDSLLNFAVQFKDR 380
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 265 bits (679), Expect = 2e-83
Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 21/324 (6%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKG 70
I++TG AGFIGSHV ++L ++ EIV +D L SS + ++ + +K
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNL---SSGNEEFVNE-----AARLVKA 50
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ D+ +YL +G + + H AA V N E NN+ T+ LLEA + G V
Sbjct: 51 DLAADDIKDYL---KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-V 106
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
R + ST VYGE I PE P + Y A+K E L+ +Y ++ +
Sbjct: 107 SRIVFTSTSTVYGEAK---VIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIY 163
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250
R NV G + + L ++L I GNG +SY+Y +D +A L
Sbjct: 164 RFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER 223
Query: 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFND-HRYFLDDQKLKRLGWK 309
+++N+G++ + V +A +C L P D L +KLKRLGWK
Sbjct: 224 VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWK 283
Query: 310 EKTPWEEGLKLTLEWYKKNPHWWG 333
+ EE +++ + ++ G
Sbjct: 284 PRYNSEEAVRMAVRDLVEDLDEEG 307
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 3e-78
Identities = 63/326 (19%), Positives = 123/326 (37%), Gaps = 31/326 (9%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG++G IG+ + L + Y ++A D + R + KF+ D++
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIV-----------QRDTGGIKFITLDVSN 50
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
D ++ + ID I H A + N+ GT+ +LEA K V++ +
Sbjct: 51 RDEIDRAVEKYSIDAIFHLAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHR-VEKVV 108
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
ST V+G ++ + P + P + TK AE+L Y+ +GL + R
Sbjct: 109 IPSTIGVFGPETPKNKV--PSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166
Query: 195 VYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH---- 246
+ P + A+K ++ + + +Y D +A +
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRP---FNDHRYFLDDQKL 303
+ V+ + YNV + ++ + I + PE I Y +D LD +
Sbjct: 227 KLVLRNGYNVTA-YTFTPSELYSKIK---ERIPEFEIEYKEDFRDKIAATWPESLDSSEA 282
Query: 304 KR-LGWKEKTPWEEGLKLTLEWYKKN 328
G+ + + + ++ +
Sbjct: 283 SNEWGFSIEYDLDRTIDDMIDHISEK 308
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 44/160 (27%)
Query: 375 LIYGKTGWIGG-----LLGKYCKDKGIA----------FEFGTGRLEDKNSLLDDMKRVR 419
L+ G +G IG L KY K IA +F T + +++ + +++
Sbjct: 3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYS 62
Query: 420 PTHVLN-AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEY 478
+ + A ++ + E + N+ GT + + K+ V +
Sbjct: 63 IDAIFHLAGILSAK-----GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIP------- 110
Query: 479 DSMHPQGSSIG---------FKEDDEPNFTRSFYSKTKAM 509
S+IG R+ + TK
Sbjct: 111 -------STIGVFGPETPKNKVPSITITRPRTMFGVTKIA 143
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 1e-77
Identities = 91/329 (27%), Positives = 135/329 (41%), Gaps = 31/329 (9%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+I++TG AGFIGSH+ ++L++ YE+V +D L + ++P + + D+
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSS-GRREFVNP-----SAELHVRDLK 53
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ D + HFAA V S N N+ T +LE + TG V+
Sbjct: 54 DYSWGAGI----KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTV 108
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ S+ VYG+ D I PE P + Y A KA E++ Y R +G+ + R
Sbjct: 109 VFASSSTVYGDAD---VIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYA 165
Query: 194 NVYGPNQFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAF----DVILHRG 248
NV GP +I FI+ + L + G+G+ +SYLY D EA
Sbjct: 166 NVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 224
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY------FLDDQK 302
NVG VLD+A + + L PE I V P L K
Sbjct: 225 APFLALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPSTPDGRGWPGDVKYMTLAVTK 282
Query: 303 LKR-LGWKEKTPWEEGLKLTLEWYKKNPH 330
L + GW+ E +K T E K
Sbjct: 283 LMKLTGWRPTMTSAEAVKKTAEDLAKELW 311
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 6e-77
Identities = 89/333 (26%), Positives = 141/333 (42%), Gaps = 23/333 (6%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLK---NLHPSRASPNF 65
+PK LITG AGFIGS++ L+K D ++V LD + +L +L + NF
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF++GDI D N G+D ++H AA V S + NI G +L A +
Sbjct: 84 KFIQGDIRNLDDCNNAC--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 141
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
V+ F + ++ YG+ + E + P +PY+ TK E+ + R YG
Sbjct: 142 DAK-VQSFTYAASSSTYGDHP---GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGF 197
Query: 186 PTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
TI R NV+G Q P +IPK+ ++G + I+G+G R + Y + +A
Sbjct: 198 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 257
Query: 242 DVILHRG--VIGHVYNVGTKKERSVLDVAADICTLF---KLEPEKTIHYVQDRPFNDHRY 296
+ G VYN+ S+ + + + + Y R +
Sbjct: 258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHS 317
Query: 297 FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
D K + LG+ K G+ L + WY
Sbjct: 318 LADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 5e-71
Identities = 94/340 (27%), Positives = 151/340 (44%), Gaps = 37/340 (10%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLK---NLHPSRASPNF 65
PK LITG AGFIGS++ +L+K + ++ LD + +L L + F
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
F++GDI ++ +G+D ++H AA V S + NI G +L A K
Sbjct: 82 CFIEGDIRDLTTCEQVM--KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK 139
Query: 126 LTGQVKRFIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
V+ F + ++ YG+ E +IGNP +PY+ TK E+ Y R
Sbjct: 140 NAQ-VQSFTYAASSSTYGDHPALPKVEENIGNP-------LSPYAVTKYVNEIYAQVYAR 191
Query: 182 SYGLPTITTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
+YG TI R NV+G Q P +IPK+ +KG + I+G+G R + Y +V
Sbjct: 192 TYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251
Query: 238 AEAFDVIL----HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEP---EKTIHYVQDRP 290
+ IL ++YNV ++ +++ I L + +I Y + R
Sbjct: 252 IQM--NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRS 309
Query: 291 FNDHRY-FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
D R+ D K L ++ EGL+L++ WY +
Sbjct: 310 -GDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 5e-71
Identities = 71/332 (21%), Positives = 128/332 (38%), Gaps = 31/332 (9%)
Query: 2 SGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA 61
S P KK+ ITG G IGSH+ L++ ++V +D ++L +
Sbjct: 11 SSGLVPRGSHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFAT-GRREHL---KD 64
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
PN F++G I L+N L+ D ++H AA + + + T N G ++
Sbjct: 65 HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDW---YNDTLTNCVGGSNVV 121
Query: 122 EACKLTGQVKRFIHVSTDEVYGET-----DMESDIGNPEASQLLPTNPYSATKAGAEMLV 176
+A K V RF++ T YG NP S Y+ +K+ E
Sbjct: 122 QAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANS------SYAISKSANE--- 171
Query: 177 MAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236
Y GL +T R NV GP +P F +G++ + R +++ D
Sbjct: 172 -DYLEYSGLDFVTFRLANVVGPRNVSG-PLPIFFQRLSEGKKCFV---TKARRDFVFVKD 226
Query: 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY 296
+A A + Y+ + + ++ ++ + L + P +
Sbjct: 227 LARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSI 285
Query: 297 FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327
LD + + G E TP +E + + ++++
Sbjct: 286 LLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 12/113 (10%)
Query: 398 FEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLA 457
F G + D + + ++P V++ A P+ DW TN +G +
Sbjct: 68 LTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPD-DW-----YNDTLTNCVGGSNVV 121
Query: 458 DVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509
K+ NV + F T Y P + D N S Y+ +K+
Sbjct: 122 QAAKKNNVGRFVYFQTALCY-GV--KPI--QQPVRLDHPRNPANSSYAISKSA 169
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 231 bits (592), Expect = 1e-70
Identities = 93/327 (28%), Positives = 142/327 (43%), Gaps = 30/327 (9%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL---HPSRASPNFKFLKG 70
++L+TG AGFIGSH+ L+ E+ LD NL F +
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLAR--GLEVAVLD---------NLATGKRENVPKGVPFFRV 50
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ + + + H AAQ V S + N+ G LLEAC+ G V
Sbjct: 51 DLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-V 109
Query: 131 KRFIHVSTDE-VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
++ + ST +YGE E P +PY+A+KA E + Y +SYGL ++
Sbjct: 110 EKLVFASTGGAIYGEVPEGERA--EETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVS 167
Query: 190 TRGNNVYGPNQFPEK---LIPKFILLAMKGQQLPIHGN-----GSNVRSYLYCADVAEAF 241
R NVYGP Q P ++ F +KG + ++ VR Y+Y DVAEA
Sbjct: 168 LRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAH 227
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQ 301
+ L +YNVGT + + +V + PE + RP + R L
Sbjct: 228 ALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPPRPGDLERSVLSPL 283
Query: 302 KLKRLGWKEKTPWEEGLKLTLEWYKKN 328
KL GW+ K ++EG++LT++ ++
Sbjct: 284 KLMAHGWRPKVGFQEGIRLTVDHFRGA 310
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 8e-65
Identities = 73/331 (22%), Positives = 130/331 (39%), Gaps = 28/331 (8%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-------ASP 63
+ + ILITG AGF+GS++ +N+P ++V LDK + N PS
Sbjct: 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68
Query: 64 NFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEA 123
+ + DI + L D + H AA + + N N LLE
Sbjct: 69 KGEVIAADINNPLDLR-RLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEI 125
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+ + I+ S+ VYG + N P N Y +K + V+++
Sbjct: 126 ARSKK--AKVIYASSAGVYG----NTKAPNVVGKNESPENVYGFSKLCMDEFVLSHS--N 177
Query: 184 GLPTITTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
+ R NVYGP +F ++ ++ + L AM +++ + G +R ++Y DV +
Sbjct: 178 DNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQ 237
Query: 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY-FL 298
A + G VYNVG + RS ++ + L + + + Y+++ ++
Sbjct: 238 ANVKAMKAQKSG-VYNVGYSQARSYNEIVS---ILKEHLGDFKVTYIKNPYAFFQKHTQA 293
Query: 299 DDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ L + E G+K L
Sbjct: 294 HIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 3e-61
Identities = 64/326 (19%), Positives = 109/326 (33%), Gaps = 26/326 (7%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ I++TG AGFIGS++ L +I+ +D L + NL K D
Sbjct: 47 RMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDF 103
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ ++ I H A + G +NN + LL C
Sbjct: 104 LIQIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IP 157
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F++ S+ YG + P N + +K + V + R
Sbjct: 158 FLYASSAATYGGRTSDFI---ESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRY 214
Query: 193 NNVYGPNQFPEK----LIPKFILLAMKGQQLPI-HGNGSNVRSYLYCADVAEAFDVILHR 247
NVYGP + + + G+ + G+ + R ++Y DVA+ L
Sbjct: 215 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV---QDRPFNDHRY-FLDDQKL 303
GV ++N+GT + S VA + I Y+ + D L
Sbjct: 275 GV-SGIFNLGTGRAESFQAVAD---ATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNL 330
Query: 304 KR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ K EG+ + W ++
Sbjct: 331 RAAGYDKPFKTVAEGVTEYMAWLNRD 356
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 6e-61
Identities = 65/321 (20%), Positives = 109/321 (33%), Gaps = 20/321 (6%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
I++TG AGFIGS++ L +I+ +D L + NL + K D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVD--LNIADYMDKEDFLI 58
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ ++ I H A + G +NN + LL C F+
Sbjct: 59 QIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IPFL 112
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
+ S+ YG + P N Y +K + V + R N
Sbjct: 113 YASSAATYGGRTSDFI---ESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFN 169
Query: 195 VYGPNQFPEK----LIPKFILLAMKGQQLPI-HGNGSNVRSYLYCADVAEAFDVILHRGV 249
VYGP + + + G+ + G+ + R ++Y DVA+ L GV
Sbjct: 170 VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229
Query: 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY-FLDDQKLKR-LG 307
++N+GT + S VA K + I + + D L+
Sbjct: 230 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 308 WKEKTPWEEGLKLTLEWYKKN 328
K EG+ + W ++
Sbjct: 289 DKPFKTVAEGVTEYMAWLNRD 309
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 4e-59
Identities = 75/324 (23%), Positives = 123/324 (37%), Gaps = 26/324 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ILITG AG +GS++ + +EI+ +D + L P ++G +T
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFAT-GKREVLPP---VAGLSVIEGSVT 75
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
A L+ S ++H AA + + N+ G+ + +A G VKR
Sbjct: 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAA---TNVQGSINVAKAASKAG-VKRL 131
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
++ T YG + P S P Y +K E + +P ++ R
Sbjct: 132 LNFQTALCYGRPA---TVPIPIDSPTAPFTSYGISKTAGEA----FLMMSDVPVVSLRLA 184
Query: 194 NVYGPNQFP-EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
NV GP IP F GQ + VR +L +D D+ L G
Sbjct: 185 NVTGPRLAIGP--IPTFYKRLKAGQ--KCFCSD-TVRDFLDMSDFLAIADLSLQEGRPTG 239
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311
V+NV T + S+ +V + + + V + LD K + GWK K
Sbjct: 240 VFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAK 299
Query: 312 TPWEEGLKLTLEWYKKNPHWWGDV 335
+++ + L WY K + D+
Sbjct: 300 VDFKDTITGQLAWYDK--YGVTDI 321
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 4e-59
Identities = 49/233 (21%), Positives = 81/233 (34%), Gaps = 33/233 (14%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGD 71
K++L+TGAAG +G + RL + L LD A PN + ++ D
Sbjct: 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQCD 51
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ A+ +N ++ G D I+H V+ F + NI G + L EA + G
Sbjct: 52 LADANAVNAMV--AGCDGIVHLGGI-SVEKPFEQILQ---GNIIGLYNLYEAARAHG-QP 104
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
R + S++ G + P Y +K E L Y +G T R
Sbjct: 105 RIVFASSNHTIGYYPQTERL--GPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVR 162
Query: 192 GNNVYGP------------NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232
+ + LI + G + + G +N +
Sbjct: 163 IGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPV-VWGASANDAGWW 214
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 3e-58
Identities = 79/329 (24%), Positives = 137/329 (41%), Gaps = 26/329 (7%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ KI ITGA GFI SH+ RL + ++A D +++ F +
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASD----WKKNEHMTEDMFCDEFHLVDL 81
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
+ N L V+EG+D + + AA + N NN + ++EA ++ G
Sbjct: 82 RVM----ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING- 136
Query: 130 VKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHRSYGL 185
+KRF + S+ +Y E +E+ + + S P P + K E L Y++ +G+
Sbjct: 137 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI 196
Query: 186 PTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEA 240
R +N+YGP EK F A + G+G RS+ + + E
Sbjct: 197 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300
+ V N+G+ + S+ ++A + + E + IH++ P D+
Sbjct: 257 VLRLTKSDFREPV-NIGSDEMVSMNEMAEMVLSF--EEKKLPIHHI-PGPEGVRGRNSDN 312
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+K LGW +EGL++T W K+
Sbjct: 313 NLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 31/178 (17%), Positives = 55/178 (30%), Gaps = 25/178 (14%)
Query: 369 RSRLKFLIYGKTGWIGGLLGKYCKDKG------------------IAFEFGTGRLEDKNS 410
LK I G G+I + + K +G EF L +
Sbjct: 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMEN 86
Query: 411 LLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNF 470
L + V HV N A G + + +S+ + N M + + + + + +
Sbjct: 87 CLKVTEGV--DHVFNLAADMG-G-MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 142
Query: 471 A-TGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY--SKTKAMVTFLSYLEIFVLVICI 525
A + CIY + + D P + + K Y + F + I
Sbjct: 143 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRI 200
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 7e-58
Identities = 78/359 (21%), Positives = 133/359 (37%), Gaps = 44/359 (12%)
Query: 2 SGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA 61
+ P S K KK+LI G GFIG H++ R+++ D+E+ +D L +L
Sbjct: 14 AQTQGPGSMKAKKVLILGVNGFIGHHLSKRILET-TDWEVFGMD--MQTDRLGDL---VK 67
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
F +GDIT V + D I+ A + ++
Sbjct: 68 HERMHFFEGDITINKEWVEYHVKK-CDVILPLVAIATPATYVKQPLRVFELDFEANLPIV 126
Query: 122 EACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL--PTNP----YSATKAGAEML 175
+ G K + ST EVYG + +P+AS L P N Y+ +K + +
Sbjct: 127 RSAVKYG--KHLVFPSTSEVYGMC--ADEQFDPDASALTYGPINKPRWIYACSKQLMDRV 182
Query: 176 VMAYHRSYGLPTITTRGNNVYGPNQFPEKL--------IPKFILLAMKGQQLPIHGNGSN 227
+ Y GL R N GP + +F+ ++G+ + + GS
Sbjct: 183 IWGYGM-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ 241
Query: 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGT-KKERSVLDVAADICTLFKLEPEKT- 282
R++ Y D A I+ G +YN+G SV ++A + L PE
Sbjct: 242 KRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYAD 301
Query: 283 ----IHYVQDRPFNDHRYFLDD--------QKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ V+ + D + + LGW + +++ L+ E Y+ +
Sbjct: 302 SAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 2e-55
Identities = 64/326 (19%), Positives = 111/326 (34%), Gaps = 30/326 (9%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KILI GA G IG+ +T +L K Y ++A D ++ L+ + F +
Sbjct: 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASD-------IRKLNTDVV-NSGPFEVVNA 54
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + +L+ I I AA N + N+ +L K +K+
Sbjct: 55 LDFNQIEHLVEVHKITDIYLMAALLSATAE-KNPAFAWDLNMNSLFHVLNLAKAKK-IKK 112
Query: 133 FIHVSTDEVYG-ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
S+ V+G T E+ P+ + + P+ Y +K E YH YG+ + R
Sbjct: 113 IFWPSSIAVFGPTTPKENT---PQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIR 169
Query: 192 GNNVYGPNQFPEK----LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF----DV 243
+ + P A+ ++ + +Y D +A
Sbjct: 170 YPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKA 229
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD---RPFNDHRYFLDD 300
+ + I YN+ + K PE TI Y D + + +DD
Sbjct: 230 PVEKIKIHSSYNLAAMSFTPTEIANE----IKKHIPEFTITYEPDFRQKIADSWPASIDD 285
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEWY 325
+ + WK E K +E
Sbjct: 286 SQAREDWDWKHTFDLESMTKDMIEHL 311
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 24/164 (14%), Positives = 43/164 (26%), Gaps = 45/164 (27%)
Query: 373 KFLIYGKTGWIG-----GLLGKYCKDKGIAFEFGTGRLE-------------DKNSLLDD 414
K LI G G IG L Y + IA + + D N +
Sbjct: 4 KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHL 63
Query: 415 MKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGC 474
++ + T + A + E + N+ + ++ K K + + +
Sbjct: 64 VEVHKITDIYLMAALLSAT----AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP--- 116
Query: 475 IYEYDSMHPQGSSIG---------FKEDDEPNFTRSFYSKTKAM 509
SSI + Y +K
Sbjct: 117 -----------SSIAVFGPTTPKENTPQYTIMEPSTVYGISKQA 149
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 9e-55
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 42/333 (12%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ +
Sbjct: 26 DRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINH 82
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ L + +D I H A+ N N + N GT +L K G
Sbjct: 83 DVV-----EPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-- 133
Query: 131 KRFIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
R + ST EVYG+ ++ E G+ + + P Y K AE + AY + G+
Sbjct: 134 ARLLLASTSEVYGDPEVHPQSEDYWGH--VNPIGPRACYDEGKRVAETMCYAYMKQEGVE 191
Query: 187 TITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +
Sbjct: 192 VRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL 251
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK 304
++ V N+G +E ++L+ A I L I + +D + K
Sbjct: 252 MNSNVSS-PVNLGNPEEHTILEFAQLIKNLVG--SGSEIQF-LSEAQDDPQ--------K 299
Query: 305 R----------LGWKEKTPWEEGLKLTLEWYKK 327
R LGW+ P EEGL + +++K
Sbjct: 300 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRK 332
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 443 VETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE----PNF 498
++T++TN +GTL + + K L+ +T +Y +HPQ ED P
Sbjct: 112 IKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ------SEDYWGHVNPIG 165
Query: 499 TRSFYSKTKAMVTFLSY 515
R+ Y + K + + Y
Sbjct: 166 PRACYDEGKRVAETMCY 182
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 9e-54
Identities = 78/350 (22%), Positives = 126/350 (36%), Gaps = 49/350 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++LI G GFIG+H+T RL++ YE+ LD + P+F F++GDI+
Sbjct: 2 RVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGS-----DAISRFLNHPHFHFVEGDIS 55
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
V + D ++ A N + ++ C KR
Sbjct: 56 IHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRI 112
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNP-------YSATKAGAEMLVMAYHRSYGLP 186
I ST EVYG M SD E L P YS +K + ++ AY GL
Sbjct: 113 IFPSTSEVYG---MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 169
Query: 187 TITTRGNNVYGPNQFPEKL--------IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
R N GP I + IL ++G + + G R + D
Sbjct: 170 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 229
Query: 239 EAFDVILHRG---VIGHVYNVG-TKKERSVLDVAADICTLFK-------LEPEKTIHYVQ 287
EA I+ G + N+G + E S+ ++ + F+ P V+
Sbjct: 230 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE 289
Query: 288 DRPFNDHRYFLDDQKL---------KRLGWKEKTPWEEGLKLTLEWYKKN 328
+ Y D + + L W+ K +E + TL+++ +
Sbjct: 290 SSSYYGKGY--QDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 6e-53
Identities = 44/239 (18%), Positives = 89/239 (37%), Gaps = 34/239 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
++L+TGAAG +GS + L +E+ D + A + + + D+
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSD---------IVDLGAAEAHEEIVACDL 51
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A ++ L+ + D I+H V+ + + + NI G + L EA + G R
Sbjct: 52 ADAQAVHDLV--KDCDGIIHLGGV-SVERPWNDILQ---ANIIGAYNLYEAARNLG-KPR 104
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
+ S++ G P + Y +K E L Y+ + + T+ R
Sbjct: 105 IVFASSNHTIGYY--PRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRI 162
Query: 193 NNVYGPNQFPEKL-----IPKFILLAMKGQQLP------IHGNGSNVRSYLYCADVAEA 240
+ + + + + F+ L + P ++G +N S+ D ++
Sbjct: 163 GSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWW---DNDKS 218
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 7e-47
Identities = 60/346 (17%), Positives = 111/346 (32%), Gaps = 47/346 (13%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIK-----NYPDYEIVALDKLDYCSSLKNLHPSRAS 62
++ I I GAAG +G +T RL+K P + +D + P+ S
Sbjct: 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID------VFQPEAPAGFS 63
Query: 63 PNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQ---THVDNSFGNSFEFT-NNNIYGTH 118
D++ LV D I H AA + F+ N+ GT
Sbjct: 64 GAVDARAADLSAPGEAE-KLVEARPDVIFHLAAIVSGEAELD-----FDKGYRINLDGTR 117
Query: 119 VLLEACKLTG----QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174
L +A ++ R + S+ V+G I P+ P Y KA E+
Sbjct: 118 YLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL-PYPI--PDEFHTTPLTSYGTQKAICEL 174
Query: 175 LVMAYHRSYGLPTITTRGNNVYGPNQFPEK----LIPKFILLAMKGQQLPIHGNGSNVRS 230
L+ Y R I R + P + + GQ+ + S
Sbjct: 175 LLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHW 234
Query: 231 YLYCADVAEAF----DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV 286
+ + + + + +V + L K+ EK + +
Sbjct: 235 HASPRSAVGFLIHGAMIDVEKVGPRRNLS-MPGLSATVGEQIE---ALRKVAGEKAVALI 290
Query: 287 QDRP-------FNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ P + ++ + LG+ ++ +EE +++ +E
Sbjct: 291 RREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDE 336
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-46
Identities = 56/345 (16%), Positives = 108/345 (31%), Gaps = 52/345 (15%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K + GA G +G H + +++V + PS +L+ +
Sbjct: 15 KYAVLGATGLLGHHAARAIRAA--GHDLVLIH-----------RPSSQIQRLAYLEPECR 61
Query: 74 CADLMNYLLVSE---GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
A+++++ + G+D ++ A E + + T+ AC V
Sbjct: 62 VAEMLDHAGLERALRGLDGVIFSAGYYPSRPR--RWQEEVASALGQTNPFYAACLQAR-V 118
Query: 131 KRFIHVSTDEVYGETDMESDI--GNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
R ++V + G S + Y K + R+ GLP +
Sbjct: 119 PRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVV 177
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
V G + I G+ + + G R+ + A+ + L RG
Sbjct: 178 IGIPGMVLGEL-DIGPTTGRVITAIGNGE-MTHYVAGQ--RNVIDAAEAGRGLLMALERG 233
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV-----------------QDRPF 291
IG Y + + D+ I L + + Q
Sbjct: 234 RIGERYLLTGH-NLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLL 292
Query: 292 N-------DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
+ FLD +K + LG+ T ++ L ++W++ N
Sbjct: 293 DETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDN 337
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 55/339 (16%), Positives = 107/339 (31%), Gaps = 72/339 (21%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
I+ITGA GF+G ++ L D+ I + +
Sbjct: 2 NIVITGAKGFVGKNLKADLTST-TDHHIFEVHR------------------------QTK 36
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+L + L D I+H A N + EF+ N+ +L+ K
Sbjct: 37 EEELESAL---LKADFIVHLAGV----NRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPA 88
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
I +S+ NPY +K E L+ Y YG R
Sbjct: 89 ILLSSSIQAT-----------------QDNPYGESKLQGEQLLREYAEEYGNTVYIYRWP 131
Query: 194 NVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--V 249
N++G P +I F + +++ ++ + + + Y D+ + +
Sbjct: 132 NLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTI 190
Query: 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD-------------RPFNDHRY 296
V V + ++ ++ + + ++T+ + + P D Y
Sbjct: 191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSY 250
Query: 297 FLDDQKLKRLGWKEKTPWEEGLKLTLEWYK----KNPHW 331
L R + E + ++++ K K HW
Sbjct: 251 PLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHW 289
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 1e-39
Identities = 94/347 (27%), Positives = 137/347 (39%), Gaps = 51/347 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
ILI G AG+IGSH +L+ +V +D +L+ H + KF GD+
Sbjct: 2 NSILICGGAGYIGSHAVKKLVDE--GLSVVVVD------NLQTGHEDAITEGAKFYNGDL 53
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + E I+ +MHFAA + V S ++ NNN+YG LLE V +
Sbjct: 54 RDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDK 112
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
FI ST YGE D I E + PTN Y TK E ++ Y ++ L R
Sbjct: 113 FIFSSTAATYGEVD-VDLI--TEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRY 169
Query: 193 NNVYG----------PNQFPEK-LIPKFILLAMKGQ--QLPIHGN------GSNVRSYLY 233
NV G PE LIP +L GQ ++ + G+ G+ +R Y++
Sbjct: 170 FNVAGATPNGIIGEDHR--PETHLIP-LVLQVALGQREKIMMFGDDYNTPDGTCIRDYIH 226
Query: 234 CADVAE----AFDVILHRGVIGHVYNVGTKKERSVLDV--AADICTLFKLEPEKTIHYVQ 287
D+ L G YN+G SV ++ A T I
Sbjct: 227 VEDLVAAHFLGLKD-LQNGGESDFYNLGNGNGFSVKEIVDAVREVT------NHEIPAEV 279
Query: 288 D--RPFNDHRYFLDDQKLKR-LGWK-EKTPWEEGLKLTLEWYKKNPH 330
R + R QK K LGW + ++ W++K P+
Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN 326
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 3e-34
Identities = 70/338 (20%), Positives = 126/338 (37%), Gaps = 29/338 (8%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEI--VALDKLDYCSSLKNLHPSRASPNFKF 67
++ K++ +TG GF G ++ L + +L S + + +
Sbjct: 7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVAD---GMQS 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
GDI + + + + + H AAQ V S+ E + N+ GT LLEA +
Sbjct: 62 EIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---- 183
G VK +++++D+ Y + E G E + +PYS +K AE++ +Y S+
Sbjct: 122 GGVKAVVNITSDKCY--DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPA 179
Query: 184 -----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
G T R NV G + I IL A + Q I N +R + + +
Sbjct: 180 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 239
Query: 239 E-----AFDVILHRGVIGHVYNVGTKKE--RSVLDVAADICTLFKLEPEKTIHYVQDRPF 291
A + +N G V ++ + + + +
Sbjct: 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL--DGNAHP 297
Query: 292 NDHRY-FLDDQK-LKRLGWKEKTPWEEGLKLTLEWYKK 327
++ Y LD K +LGW + L+ + W+K
Sbjct: 298 HEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 335
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-33
Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 41/340 (12%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
M G + + LITG AGF+G ++ N L + + E+ + +
Sbjct: 1 MRGSHHHHHHGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSR----------NNEA 48
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
PN + + DI D V I D I H AA++ V +S+ N + N++GT
Sbjct: 49 KLPNVEMISLDIM--DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTL 106
Query: 119 VLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
+L+A + + R + + + E YG E + E +QL P +PY +KA ML
Sbjct: 107 HVLDAVRDSNLDCRILTIGSSEEYGMILPE-ESPVSEENQLRPMSPYGVSKASVGMLARQ 165
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFIL-LAM--KGQQLPIH--GNGSNVRSYLY 233
Y ++YG+ I TR N GP Q + F + +Q PI GN VR +
Sbjct: 166 YVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD 225
Query: 234 CADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFND 293
D+ +A+ ++ G G VYNV + + DV + + ++ + + +
Sbjct: 226 VRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTEL---------N 276
Query: 294 HRYF-------L--DDQKLKR-LGWKEKTPWEEGLKLTLE 323
L +++LK GWK + P E+ L L+
Sbjct: 277 PLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQ 316
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-32
Identities = 84/388 (21%), Positives = 142/388 (36%), Gaps = 82/388 (21%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALD-----------------KLDYCSSLKNL 56
++L+ G AG+IGSH L+++ ++ +V +D
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 57 HPSRASPNFKFLKGDITCADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIY 115
P A GD+ D +N + G ID ++H A V S + ++ +NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 116 GTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN----PEASQLLPTNPYSATKAG 171
G LL+A L + I S+ ++G M S N ++ P +PY +K
Sbjct: 123 GILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLI 181
Query: 172 AEMLVMAYHRSYGLPTITTRGNNVYG----------PNQFPEK-LIPKFILLAMKGQ--- 217
AE ++ +YG+ I R N G LIP IL +
Sbjct: 182 AERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQ--GSTHLIP-IILGRVMSDIAP 238
Query: 218 --------------QLPIHGN------GSNVRSYLYCADVAE----AFDVILHRGVIG-- 251
++PI G G+ VR Y++ D+A A D + G
Sbjct: 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKS 298
Query: 252 ---HVYNVGTKKERSVLDV--AADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQKLK 304
V+N+GT + SV +V A T I + R + K +
Sbjct: 299 KYFSVFNLGTSRGYSVREVIEVARKTT------GHPIPVRECGRREGDPAYLVAASDKAR 352
Query: 305 R-LGWK-EKTPWEEGLKLTLEWYKKNPH 330
LGWK + E ++ + ++ + +P+
Sbjct: 353 EVLGWKPKYDTLEAIMETSWKFQRTHPN 380
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-31
Identities = 80/369 (21%), Positives = 138/369 (37%), Gaps = 61/369 (16%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
++ + + + ++LI G GFIG+H+T RL++ YE+ LD +
Sbjct: 304 LNSQPACTARRRTRVLILGVNGFIGNHLTERLLRE-DHYEVYGLD-----IGSDAISRFL 357
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAA-------QTHVDNSFGNSFEFTNNN 113
P+F F++GDI+ V + D ++ A + F FE
Sbjct: 358 NHPHFHFVEGDISIHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFE----- 411
Query: 114 IYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP-------YS 166
++ C KR I ST EVYG M SD E L P YS
Sbjct: 412 --ENLRIIRYCVKYR--KRIIFPSTSEVYG---MCSDKYFDEDHSNLIVGPVNKPRWIYS 464
Query: 167 ATKAGAEMLVMAYHRSYGLP--------TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ 218
+K + ++ AY GL + R +N+ + I + IL ++G
Sbjct: 465 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524
Query: 219 LPIHGNGSNVRSYLYCADVAEA-FDVILHRGVI--GHVYNVGT-KKERSVLDVAADICTL 274
+ + G R + D EA + +I + G G + N+G + E S+ ++ +
Sbjct: 525 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLAS 584
Query: 275 FKLEPEKTIHYVQDRPFND---------------HRYFLDDQKLKRLGWKEKTPWEEGLK 319
F+ P + H+ F HR + L W+ K +E +
Sbjct: 585 FEKHPLRH-HFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETID 643
Query: 320 LTLEWYKKN 328
TL+++ +
Sbjct: 644 ETLDFFLRT 652
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-30
Identities = 86/352 (24%), Positives = 139/352 (39%), Gaps = 49/352 (13%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-SSLKNLHPSR----ASPNF 65
IL+TG AG+IGSH L+ + Y++V D + S + + R
Sbjct: 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIAD--NLVNSKREAIA--RIEKITGKTP 57
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
F + D++ + + + I +HFAA V S E+ NN+ LL +
Sbjct: 58 AFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMR 117
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
VKR + S+ VYG + E L TNPY TK AE ++ +
Sbjct: 118 ERA-VKRIVFSSSATVYGVPER---SPIDETFPLSATNPYGQTKLMAEQILRDVEAADPS 173
Query: 186 PTITT-RGNNVYG----------PNQFPEKLIPKFIL-LAM-KGQQLPIHGN------GS 226
+ T R N G P P L+P ++ +A+ K ++L + G+ G+
Sbjct: 174 WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP-YVAQVAVGKLEKLRVFGSDYPTPDGT 232
Query: 227 NVRSYLYCADVAE----AFDVIL-HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK 281
VR Y++ D+A A D + N+GT + SVL+V F+ +
Sbjct: 233 GVRDYIHVVDLARGHIAALDALERRDAS--LTVNLGTGRGYSVLEVVRA----FEKASGR 286
Query: 282 TIHY--VQDRPFNDHRYFLDDQK-LKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
+ Y V RP + + + + +GWK + E W + NP
Sbjct: 287 AVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPR 338
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-28
Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 50/350 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR----ASPNFKFLK 69
++L+TG +G+IGSH +L++N ++++ LD L S L + F++
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL-CNSKRSVLP--VIERLGGKHPTFVE 56
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI LM +L IDT++HFA V S E+ +NN+ GT L+ A +
Sbjct: 57 GDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN- 115
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATKAGAEMLVMAYHRSY-GLPT 187
VK FI S+ VYG+ I E+ P +PY +K E ++ ++
Sbjct: 116 VKNFIFSSSATVYGDNPK---IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 188 ITTRGNNVYG----------PNQFPEKLIPKFIL-LAM-KGQQLPIHGN------GSNVR 229
R N G P P L+P +I +A+ + L I GN G+ VR
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 230 SYLYCADVAE----AFDVIL-HRGVIGHVYNVGTKKERSVLD-VAADICTLFKLEPEKTI 283
Y++ D+A+ A + + GV H+YN+G SVLD V A F K +
Sbjct: 232 DYIHVMDLADGHVVAMEKLANKPGV--HIYNLGAGVGNSVLDVVNA-----FSKACGKPV 284
Query: 284 HY--VQDRPFNDHRYFLDDQK-LKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
+Y R + Y+ D K + L W+ +E + T W ++P
Sbjct: 285 NYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 87/355 (24%), Positives = 136/355 (38%), Gaps = 50/355 (14%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---R----ASPN 64
+K+L+TG AG+IGSH L++ Y V +D P R +
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS 59
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
+F + DI + L ++HFA V S ++ N+ GT LLE
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYSATKAGAEMLVMAYHRSY 183
K G VK + S+ VYG + EA TNPY +K E ++ ++
Sbjct: 120 KAHG-VKNLVFSSSATVYGNPQY---LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD 175
Query: 184 -GLPTITTRGNNVYG----------PNQFPEKLIPKFIL-LAM-KGQQLPIHGN------ 224
+ R N G P P L+P ++ +A+ + + L + GN
Sbjct: 176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP-YVSQVAIGRREALNVFGNDYDTED 234
Query: 225 GSNVRSYLYCADVAE----AFDVIL-HRGVIGHVYNVGTKKERSVLD-VAADICTLFKLE 278
G+ VR Y++ D+A+ A + G +YN+GT SVL V A +
Sbjct: 235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGC--RIYNLGTGTGYSVLQMVQA-----MEKA 287
Query: 279 PEKTIHY--VQDRPFNDHRYFLDDQK-LKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
K I Y V R + + + + LGW + + W K+NP
Sbjct: 288 SGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 4e-27
Identities = 90/374 (24%), Positives = 147/374 (39%), Gaps = 65/374 (17%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
M+ + + S K +L+TG AG+IGSH LI+N Y+ V D NL S
Sbjct: 1 MTAQLQSESTS-KIVLVTGGAGYIGSHTVVELIEN--GYDCVVAD---------NLSNST 48
Query: 61 ASP----------NFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFT 110
+ F + D+ + + ID+++HFA V S +
Sbjct: 49 YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYY 108
Query: 111 NNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESD---IGNPEASQLLPTNPYSA 167
+NNI GT VLLE + V +F+ S+ VYG+ + I PE L PTNPY
Sbjct: 109 HNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPI--PEECPLGPTNPYGH 165
Query: 168 TKAGAEMLVMAYHRSY--GLPTITTRGNNVYG----------PNQFPEKLIPKFIL-LAM 214
TK E ++ + S R N G P P L+P ++ +A+
Sbjct: 166 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAV 224
Query: 215 -KGQQLPIHGN------GSNVRSYLYCADVAE----AFDVILHRGVIG---HVYNVGTKK 260
+ ++L I G+ G+ +R Y++ D+A+ A + +N+G+ K
Sbjct: 225 GRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK 284
Query: 261 ERSVLD-VAADICTLFKLEPEKTIHY--VQDRPFNDHRYFLDDQK-LKRLGWKEKTPWEE 316
+V + A F + Y R + + + L W+ + E+
Sbjct: 285 GSTVFEVYHA-----FCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVED 339
Query: 317 GLKLTLEWYKKNPH 330
K +W +NP
Sbjct: 340 SCKDLWKWTTENPF 353
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 97.1 bits (241), Expect = 6e-22
Identities = 46/369 (12%), Positives = 91/369 (24%), Gaps = 65/369 (17%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPD---YEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
LI G G IG+ + L +++ + + + +++
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGV-------ARRTRPAWHEDNPINYVQ 54
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
DI+ D L + + H T + S E N +L+A
Sbjct: 55 CDISDPDDSQAKL--SPLTDVTHVFYVTWANRS--TEQENCEANSKMFRNVLDAVIPNCP 110
Query: 130 -VKRFIHVSTDEVYGETDMESDIGNPEASQL---LPTNPYSATKAGAEMLVMA-YHRSYG 184
+K + + Y LP Y E +++ + G
Sbjct: 111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG 170
Query: 185 LPTITTRGNNVYGPNQ-----FPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
L R N++G + L + +G+ L G + Y C+D
Sbjct: 171 LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230
Query: 240 AFDVIL----HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEP---------------- 279
+ + +NV + F +E
Sbjct: 231 IAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMK 290
Query: 280 ---------------------EKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGL 318
+ I + D + + K K G+ +
Sbjct: 291 GKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAF 350
Query: 319 KLTLEWYKK 327
++ K
Sbjct: 351 ISWIDKAKA 359
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 3e-20
Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 41/253 (16%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFK 66
K KKI++ GA+GF+GS + N + +E+ A+ +K+ + + K
Sbjct: 3 KVKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIK-----------IENEHLK 49
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
K D++ D + + +G D ++ N N+ + + I +++ K
Sbjct: 50 VKKADVSSLDEVCEVC--KGADAVISAF------NPGWNNPDIYDETIKVYLTIIDGVKK 101
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
G V RF+ V + + E P N KA E + + +
Sbjct: 102 AG-VNRFLMVGGAGSLFIAPGLRLMDSGEV----PENILPGVKALGEFYLNFLMKEKEID 156
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVIL 245
+ P + + + + G S++ D A A D +
Sbjct: 157 WVFFSPAADMRP-------GVRTGRYRLGKDDMIVDIVG---NSHISVEDYAAAMIDELE 206
Query: 246 HRGVIGHVYNVGT 258
H + +G
Sbjct: 207 HPKHHQERFTIGY 219
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 53/324 (16%), Positives = 103/324 (31%), Gaps = 51/324 (15%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KILI G G +G + RL +E+ L S + L D+
Sbjct: 4 SKILIAGC-GDLGLELARRLTAQ--GHEVTGL-----RRS-----AQPMPAGVQTLIADV 50
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
T D + +V + +++ A + + + + + G L A + ++
Sbjct: 51 TRPDTLA-SIVHLRPEILVYCVAASEYSDE-----HYRLSYVEGLRNTLSALEGAP-LQH 103
Query: 133 FIHVSTDEVYGETDMESDIGNP--EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
VS+ VYG+ E + + + AE L+ +
Sbjct: 104 VFFVSSTGVYGQEV-----EEWLDEDTPPIAKDFSGKRMLEAEALLA------AYSSTIL 152
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR--- 247
R + +YGP + I A +Q P + + ++ D A ++ +
Sbjct: 153 RFSGIYGPGRLR------MIRQAQTPEQWP---ARNAWTNRIHRDDGAAFIAYLIQQRSH 203
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
V +Y V + V D+ + + P L + +L G
Sbjct: 204 AVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGA-----TPPVQGNKKLSNARLLASG 258
Query: 308 WKEKTP-WEEGLKLTLEWYKKNPH 330
++ P + G L ++ H
Sbjct: 259 YQLIYPDYVSGYGALLAAMREGHH 282
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 1e-19
Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD----KLDYCSSLKNLHPSRASPNF 65
+ ILITG G G +++ +I+ K + N P
Sbjct: 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN------DPRM 72
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
+F GD+ DL EG+D +H AA HV + N E NI G ++ AC
Sbjct: 73 RFFIGDVR--DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINAC- 129
Query: 126 LTGQVKRFIHVSTDE-VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
L + + I +STD+ P N Y ATK ++ L ++ + G
Sbjct: 130 LKNAISQVIALSTDKAAN------------------PINLYGATKLCSDKLFVSANNFKG 171
Query: 185 LPTIT---TRGNNVYGPNQFPEKLIPKFI-LLAMKGQQLPI 221
R NV G ++P F L+ K ++PI
Sbjct: 172 SSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPI 209
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 3e-19
Identities = 74/355 (20%), Positives = 142/355 (40%), Gaps = 78/355 (21%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+++ I G G +GS + +L + D E+V + L
Sbjct: 2 AKQRVFIAGHRGMVGSAIRRQLEQR-GDVELVLRTR-------DEL-------------- 39
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQT---HVDNSFGNSFEFTN----NNIYGTHVLLEA 123
++ + ++ SE ID + AA+ +N++ F + N +NI + A
Sbjct: 40 NLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNI------IHA 93
Query: 124 CKLTGQVKRFIHVSTDEVY--------GETDMESDIGNPEASQLLPTN-PYSATK-AGAE 173
V + + + + +Y E+++ G E PTN PY+ K AG +
Sbjct: 94 AHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQ--GTLE-----PTNEPYAIAKIAGIK 145
Query: 174 MLVMAYHRSYGLPTITTRGNNVYGPN-QFPEK-------LIPKFILLAMKGQ-QLPIHGN 224
+ +Y+R YG + N+YGP+ F L+ +F + + + G+
Sbjct: 146 L-CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGS 204
Query: 225 GSNVRSYLYCADVAEAFDVILHRGVIGHV---------YNVGTKKERSVLDVAADICTL- 274
G+ +R +L+ D+A A ++ + NVGT + ++ ++A I +
Sbjct: 205 GTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV 264
Query: 275 -FKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
+K + + +P R LD +L +LGW + E GL T +W+ +N
Sbjct: 265 GYKGR----VVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 315
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 9e-19
Identities = 41/254 (16%), Positives = 77/254 (30%), Gaps = 42/254 (16%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRAS---PNFKFLKG 70
KI I GA G GS + +E+ A+ + + + + + L+
Sbjct: 2 KIGIIGATGRAGSRILEEAKNR--GHEVTAIVR----------NAGKITQTHKDINILQK 49
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI D T+ + Q V +++G S + ++ L+ T
Sbjct: 50 DIF--D-----------LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-S 95
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
R + V + + + E+ L Y +A A+ L
Sbjct: 96 PRLLVVGGAASLQIDEDGNTL--LESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYI 153
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILHRGV 249
+ ++ P + + L +G S++ D A A D I
Sbjct: 154 SPSAMFEPG-------ERTGDYQIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH 203
Query: 250 IGHVYNVGTKKERS 263
+ + V K E
Sbjct: 204 LNEHFTVAGKLEHH 217
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 1e-18
Identities = 52/296 (17%), Positives = 99/296 (33%), Gaps = 51/296 (17%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYP-DYEIVAL----------DKL-----DYC 50
S + + +L+TGA GF+G ++ L++ D ++ L +L
Sbjct: 68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGD 127
Query: 51 SSLKNLHPSRASPNFKFLKGDITCADL----MNYLLVSEGIDTIMHFAAQTHVDNSFGNS 106
L A+ + + GD + DL + ++E +D I+ AA + +
Sbjct: 128 PELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHEL 186
Query: 107 FEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT---- 162
F N+ GT L+ LT ++K F +VST +V + + + + + PT
Sbjct: 187 FG---PNVAGTAELIRIA-LTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVD 242
Query: 163 ----NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF-----PEKLIPKFILLA 213
Y +K E+L+ + LP R + + + + +L
Sbjct: 243 GGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL 302
Query: 214 MKGQQLPIHGNGSNVRSYL-----------YCAD--VAEAFDVILHRGVIGHVYNV 256
M P + + A+ V Y+V
Sbjct: 303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHV 358
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 4e-18
Identities = 55/284 (19%), Positives = 86/284 (30%), Gaps = 55/284 (19%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRAS---PNF 65
S +L+TGA+G G V +L + + L +
Sbjct: 1 SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR----------SAQGKEKIGGEA 50
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMH-------------FAAQTHVDNSFGNSFEFTNN 112
GDIT AD +N +GID ++ + F +
Sbjct: 51 DVFIGDITDADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQV 108
Query: 113 NIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172
+ G ++A K+ G VK + V G T+ + + L K A
Sbjct: 109 DWIGQKNQIDAAKVAG-VKHIVVVG---SMGGTNPDHPL------NKLGNGNILVWKRKA 158
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232
E + G P R +K LL K +L + R
Sbjct: 159 EQYL----ADSGTPYTIIR------AGGLLDKEGGVRELLVGKDDELLQTDTKTVPR--- 205
Query: 233 YCADVAEAF-DVILHRGVIGHVYNVGTKKERSVLDVAADICTLF 275
ADVAE +L +++G+K E + D LF
Sbjct: 206 --ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPT-KDFKALF 246
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 67/373 (17%), Positives = 109/373 (29%), Gaps = 90/373 (24%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVA----LDKLDYCSSLKNLHPSRAS 62
+ +L+TGA GF+ SHV +L+++ Y++ KL L+ ++
Sbjct: 6 AVLPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLAN---LQKRWDAKYP 60
Query: 63 PNFKFL-KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
F+ D+ Y V +G + H A+ N E I GT L
Sbjct: 61 GRFETAVVEDMLKQG--AYDEVIKGAAGVAHIASVVSFSN---KYDEVVTPAIGGTLNAL 115
Query: 122 EACKLTGQVKRFIHVS------------TDEVYGETD-----MESDIGNPEASQLLPTNP 164
A T VKRF+ S E ++ PE+
Sbjct: 116 RAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWV 175
Query: 165 YSATKAGAEMLVMAYHR----SYGLPTITTRGNN---VYGPNQFPEKLIP---KFILLAM 214
Y+A+K AE+ + + L + G PE +++
Sbjct: 176 YAASKTEAELAAWKFMDENKPHFTLNAV-----LPNYTIGTIFDPETQSGSTSGWMMSLF 230
Query: 215 KGQQ---LPIHGNGS--NVRSYLYCADVAEAFDVILHRGVIGHVY---NVGTKKER---- 262
G+ L + + D+ H+ ++ R
Sbjct: 231 NGEVSPALALMPPQYYVSAV------DIGLL-----------HLGCLVLPQIERRRVYGT 273
Query: 263 ----SVLDVAADICTLFKLEPEKTI-----HYVQDRPFNDHRYFLDDQKLKRLGWKEKTP 313
V A L+ P KT QD D + LK LG
Sbjct: 274 AGTFDWNTVLATFRKLY---PSKTFPADFPDQGQDLSKFDTAP--SLEILKSLGRPGWRS 328
Query: 314 WEEGLKLTLEWYK 326
EE +K +
Sbjct: 329 IEESIKDLVGSET 341
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 89/354 (25%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+++L+TGA G +G V +N ++ V + + ++
Sbjct: 3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARPKFEQV--------------NL 46
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTGQVK 131
++ +++++ I+H AA+ D + + N+ + L + G
Sbjct: 47 LDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQP-DAASQLNVDASGNLAKEAAAVG--A 103
Query: 132 RFIHVSTDEV-------YGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHR 181
I++S+D V Y E D P Y TK E V+ +
Sbjct: 104 FLIYISSDYVFDGTNPPYREED--------------IPAPLNLYGKTKLDGEKAVLENNL 149
Query: 182 S---------YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV---- 228
YG + + + K + + N+
Sbjct: 150 GAAVLRIPILYG--EVEKLEES------AVTVMFDK---VQFSNKSA-------NMDHWQ 191
Query: 229 -RSYLYCADVAEAFDVILHRGVIGH----VYNVGTKKERSVLDVAADICTLFKLEPEK-- 281
R + DVA + + ++ ++ ++ + ++A I F L
Sbjct: 192 QRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLR 251
Query: 282 --TIHYVQ--DRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHW 331
T V RP N LD KL+ LG ++TP+ G+K +L + + W
Sbjct: 252 PITDSPVLGAQRPRNAQ---LDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRW 302
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 59/351 (16%), Positives = 113/351 (32%), Gaps = 104/351 (29%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR-----------LEDKNSLLDDMKRVRPT 421
+ L+ G TG +G + K + G G L D N++ + +P
Sbjct: 4 RVLVTGATGLLGRAVHKEFQQNNWHA-VGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPH 62
Query: 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSM 481
+++ A D E+ + NV + LA L+ ++ Y +D
Sbjct: 63 VIVHCAAER---RPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSD--YVFD-- 115
Query: 482 HPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGLLKA 539
G++ ++E+D P + Y KTK L E VL + +
Sbjct: 116 ---GTNPPYREEDIPA-PLNLYGKTK--------LDGEKAVLENNLGAAV---------- 153
Query: 540 YENVCTLRLRMPI--SSDLSNPRNFVT----KLARYNKVVNI-------P-NSMTVLDEM 585
LR+PI + VT K+ NK N+ P + V
Sbjct: 154 --------LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC 205
Query: 586 LPIAI-EMARRNCRGAWNFTNPGVIS-H---NEILELYK-----------EYIDPQLKWS 629
+A M + +G ++++ ++ + I + + +
Sbjct: 206 RQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLG----- 260
Query: 630 NFNLEEQAKVLVAPR-SNNHMDVTKLKKEFPEVL-----SIKDSIIKYVLE 674
A R N +D +KL+ IK+S+ ++++
Sbjct: 261 ------------AQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 3e-17
Identities = 64/373 (17%), Positives = 119/373 (31%), Gaps = 98/373 (26%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVA----LDKLDYCSSLKNL 56
M + + + +TGA+GFIGS + RL++ Y + A + L +L
Sbjct: 1 MGSQ-------SETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDL 51
Query: 57 HPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNN--- 113
+A + K D+ ++ +G + H A +F + +
Sbjct: 52 P--KAETHLTLWKADLADEG--SFDEAIKGCTGVFHVAT----------PMDFESKDPEN 97
Query: 114 ------IYGTHVLLEACKLTGQVKRFIHVST----------DEVYGETDMESDIGNPEAS 157
I G ++++C V+R + S+ VY E+ SD+ A
Sbjct: 98 EVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCW-SDMEFCRAK 156
Query: 158 QLLPTNPYSATKAGAEMLVMAYHRSYGL------PTITTRGNNVYGPNQFPE-----KLI 206
+ + Y +K AE Y + + PT+ V GP
Sbjct: 157 K-MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTL------VVGPFIMSSMPPSLITA 209
Query: 207 PKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKE---R- 262
I + G ++ D+ A H+Y + + R
Sbjct: 210 LSPITGNEAHYSIIRQGQFVHLD------DLCNA-----------HIY-LFENPKAEGRY 251
Query: 263 -------SVLDVAADICTLFKLEPEKTIHY-VQDRPFNDHRYFLDDQKLKRLGWKEKTPW 314
+LD+A + + PE I + N +KL LG++ K
Sbjct: 252 ICSSHDCIILDLAKMLREKY---PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSL 308
Query: 315 EEGLKLTLEWYKK 327
E+ ++ +
Sbjct: 309 EDMFTGAVDTCRA 321
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 9e-15
Identities = 67/377 (17%), Positives = 122/377 (32%), Gaps = 95/377 (25%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVA----LDKLDYCSSLKNL 56
M+ + K + G GF+ S + L++ Y + D S L L
Sbjct: 1 MATQHPIGK---KTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLEL 55
Query: 57 HPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNN--- 113
+ K + D+T ++ G D + H A F + +
Sbjct: 56 Q---ELGDLKIFRADLTDEL--SFEAPIAGCDFVFHVAT----------PVHFASEDPEN 100
Query: 114 ------IYGTHVLLEACKLTGQVKRFIHVS------------TDEVYGETDMESDIGNPE 155
I G +++AC VKR I S T V E + +DI
Sbjct: 101 DMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNW-TDIEFLT 159
Query: 156 ASQLLPTNPYSATKAGAEMLVMAYHRSYGL------PTITTRGNNVYGPNQFPEKLIP-- 207
+++ PT Y A+K AE + + PT+ + G + + +P
Sbjct: 160 SAK-PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTL------MAGSSLTSD--VPSS 210
Query: 208 -KFILLAMKGQQLPIHGNGSNVRSYLYCA-----DVAEAFDVILHRGVIGHVYNVGTKKE 261
+ + G + I+G + DV A H++ V K+
Sbjct: 211 IGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRA-----------HIF-VAEKES 258
Query: 262 ---R--------SVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKE 310
R SV ++A + + P+ + + + +KL + G+
Sbjct: 259 ASGRYICCAANTSVPELAKFLSKRY---PQYKVPTDFGDFPPKSKLIISSEKLVKEGFSF 315
Query: 311 KTPWEEGLKLTLEWYKK 327
K EE ++E++K
Sbjct: 316 KYGIEEIYDESVEYFKA 332
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-14
Identities = 70/355 (19%), Positives = 124/355 (34%), Gaps = 78/355 (21%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVA-----LDKLDYCSSLKNLHPSRASPNFKF 67
++ +TG GF+GS + L++N Y + ++ S L NL AS F
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNL--PGASEKLHF 57
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
D++ D ++ EG I H A+ S T + G +L+AC +
Sbjct: 58 FNADLSNPD--SFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACVNS 114
Query: 128 GQVKRFIHVST----------DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM 177
VKRFI+ S+ +V E+D SD+ + + Y+ +K AE V+
Sbjct: 115 KTVKRFIYTSSGSAVSFNGKDKDVLDESDW-SDVDLLRSVK-PFGWNYAVSKTLAEKAVL 172
Query: 178 AYHRSYGL------PTITTRGNNVYGPNQFPEKLIP---KFILLAMKGQQLPIHGNGS-- 226
+ G+ + G P+ +P + L+ + G++ G
Sbjct: 173 EFGEQNGIDVVTLILPF------IVGRFVCPK--LPDSIEKALVLVLGKK-EQIGVTRFH 223
Query: 227 --NVRSYLYCADVAEAFDVILHRGVIGHV--YNVGTKKER--------SVLDVAADICTL 274
+V DVA A H+ R + +++ +
Sbjct: 224 MVHVD------DVARA-----------HIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAK 266
Query: 275 FKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKK 327
+ PE I V L+ +KL G+ K E+ ++ K+
Sbjct: 267 Y---PEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKE 318
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 7e-14
Identities = 59/319 (18%), Positives = 111/319 (34%), Gaps = 68/319 (21%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ LITGA+G +G ++ L +E++ + L D+T
Sbjct: 2 RTLITGASGQLGIELSRLL---SERHEVIKVYNSSEIQGGYKL--------------DLT 44
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNS---FGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ ++ + D I++ AA T VD +++ N ++ A K+
Sbjct: 45 DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKI---NAEAVRHIVRAGKVID-- 99
Query: 131 KRFIHVSTDEVY-GETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
+H+STD V+ GE E DI N P N Y +K E + +
Sbjct: 100 SYIVHISTDYVFDGEKGNYKEEDIPN-------PINYYGLSKLLGETFALQDD------S 146
Query: 188 ITTRGNNVYGPNQFPEKLIPKFIL-LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
+ R + ++ F P ++ +G+ + S + +A A +L
Sbjct: 147 LIIRTSGIFRNKGF-----PIYVYKTLKEGKTVFAF---KGYYSPISARKLASAILELLE 198
Query: 247 RGVIG--HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD-------RPFNDHRYF 297
G HV S ++A I F L + V + RP++
Sbjct: 199 LRKTGIIHVAGERI----SRFELALKIKEKFNL--PGEVKEVDEVRGWIAKRPYDS---S 249
Query: 298 LDDQKLKRLGWKEKTPWEE 316
LD + +++ + +
Sbjct: 250 LDSSRARKILSTDFYTLDL 268
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR---------LEDKNSLLDDMKRVRPTHV 423
+ LI G +G +G L + ++ + L D L D + + RP +
Sbjct: 2 RTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVI 61
Query: 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHP 483
+NAA +T +VD CE + + + N + K + +++ +T Y +D
Sbjct: 62 INAAAMT---DVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD--YVFD---- 112
Query: 484 QGSSIGFKEDDEPNFTRSFYSKTK 507
G +KE+D PN ++Y +K
Sbjct: 113 -GEKGNYKEEDIPN-PINYYGLSK 134
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 5e-13
Identities = 72/352 (20%), Positives = 117/352 (33%), Gaps = 106/352 (30%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
++++ITGA G +G + L N +Y+I DK DI
Sbjct: 6 ERVIITGANGQLGKQLQEEL--NPEEYDIYPFDKKL---------------------LDI 42
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
T + ++ I+H AA T VD ++ N G + A +L G
Sbjct: 43 TNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVI---NAIGARNVAVASQLVG- 98
Query: 130 VKRFIHVSTDEV--------YGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMA 178
+ +++STD V Y E P Y A+K E V
Sbjct: 99 -AKLVYISTDYVFQGDRPEGYDEFH--------------NPAPINIYGASKYAGEQFVKE 143
Query: 179 YHRS---------YGLPTITTRGNNVYGPNQFPEKLIPKFIL-LAMKGQQLPI----HGN 224
H YG GNN F K ++ L + +++ + G+
Sbjct: 144 LHNKYFIVRTSWLYG-----KYGNN------F-----VKTMIRLGKEREEISVVADQIGS 187
Query: 225 GSNVRSYLYCADVAEAFDVILHRGVIG--HVYNVG--TKKE--RSVLDVAADICTLFKLE 278
+ Y AD+ + ++H + G HV N G + E + + A +
Sbjct: 188 PT------YVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKV---NVL 238
Query: 279 PEKTIHYVQ--DRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
P T + RP L+ G+ + WEEGL+ K +
Sbjct: 239 PVSTEEFGAAAARPKYSI---FQHNMLRLNGFLQMPSWEEGLERFFIETKSH 287
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 7e-09
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE----DKNSLLDDMKRVRPTHVLNAAG 428
+ +I G G +G L + + + + + + + ++ +RP +++ A
Sbjct: 7 RVIITGANGQLGKQLQEELNPEEYDI-YPFDKKLLDITNISQVQQVVQEIRPHIIIHCAA 65
Query: 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSI 488
T VD E R N +G +A + L+ +T Y + G
Sbjct: 66 YT---KVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTD--YVFQ-----GDRP 115
Query: 489 G-FKEDDEPNFTRSFYSKTK 507
+ E P + Y +K
Sbjct: 116 EGYDEFHNPA-PINIYGASK 134
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-12
Identities = 55/279 (19%), Positives = 93/279 (33%), Gaps = 68/279 (24%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFKFLK 69
KI I G+ G +G + L DY+I A +++ N K +
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVP------------QYNNVKAVH 47
Query: 70 GDITC-ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
D+ + M L G+D I++ + S G S + G L++A +
Sbjct: 48 FDVDWTPEEMAKQL--HGMDAIINVSG------SGGKSLLKVDLY--GAVKLMQAAEKAE 97
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP-T 187
VKRFI +ST E IG Y K A++ + + L T
Sbjct: 98 -VKRFILLST---IFSLQPEKWIGAG----FDALKDYYIAKHFADLYLT---KETNLDYT 146
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILH 246
I P E+ I + + SN DVA+ ++++
Sbjct: 147 I-------IQPGALTEEEATGLIDIND-------EVSASNTI-----GDVADTIKELVMT 187
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHY 285
IG V ++ K + + +L + H+
Sbjct: 188 DHSIGKVISMHNGKT----AIKEALESLLE---HHHHHH 219
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 65.4 bits (159), Expect = 4e-12
Identities = 27/244 (11%), Positives = 72/244 (29%), Gaps = 34/244 (13%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KI + GA G GS + + +E++A+ + P +A+ +
Sbjct: 2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVVR----------DPQKAADRLGATVATLV 49
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
L+ + +D ++ + +G+ + + + L+ + +
Sbjct: 50 KEPLVLTEADLDSVDAVVDALSV-----PWGSGRGYLHLD--FATHLVSLLRNSD-TLAV 101
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ + + I + + + P+ + + I +
Sbjct: 102 FILGSASLAMPGADHPMI--LDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPS 159
Query: 194 NVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILHRGVIGH 252
+ + L + +G +S++ ++A A D + H I
Sbjct: 160 EAFPSGPATSYVAG--------KDTLLVGEDG---QSHITTGNMALAILDQLEHPTAIRD 208
Query: 253 VYNV 256
V
Sbjct: 209 RIVV 212
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 6e-12
Identities = 60/518 (11%), Positives = 143/518 (27%), Gaps = 140/518 (27%)
Query: 232 LYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF 291
C DV + IL + I H+ ++ + + E+ +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR-----LFWTLLSKQEEMV-------- 79
Query: 292 NDHRYFLDDQKLKRLGWKEKTPWEEGLK---LTLEWY--KKNPHWWGDVTGALCPH--PS 344
+ F+++ + +P + + + Y +++ + D +
Sbjct: 80 ---QKFVEEVLRINYKFL-MSPIKTEQRQPSMMTRMYIEQRDR-LYNDNQ-VFAKYNVSR 133
Query: 345 VILLTDSCGNDDAFFLHNG-YEICGRSRLKFLIYGKTGWIG--GLLGKYCKDKGI--AFE 399
+ L E+ R LI G G G + C + +
Sbjct: 134 LQPYLK---------LRQALLEL--RPAKNVLIDGVLG-SGKTWVALDVCLSYKVQCKMD 181
Query: 400 FG-----TGRLEDKNSLLDDMK----RVRPTHVLNAAGITGRP-NVDWCESH--RVETIR 447
F ++L+ ++ ++ P + + + ++ R+ +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 448 TNVMGTLTLADVCKEKNVLLMNFATGC--------IYEYDSMHPQGSSIGFKEDDEPNFT 499
L L +V K N C D + ++ + T
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNL--SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299
Query: 500 RSFYSKTKAMVTFLSYLEIFVLVICIE-CLINFQVEGLLKA-----------YENVCTLR 547
+ K++ L YL+ + E N + ++ +++V +
Sbjct: 300 P---DEVKSL--LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 548 LRMPISSDLSN--P---RNFVTKLARYNKVVNIPNSMTVL---------DEMLPIAIEMA 593
L I S L+ P R +L+ + +IP +L +++ + ++
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLSLIWFDVIKSDVMVVVNKLH 412
Query: 594 RRNCRGAWNFTNPGVIS------------------HNEILELYKEYIDPQLKWSNFNLEE 635
+ + IS H I++ Y + + +
Sbjct: 413 KYSLVEKQP--KESTISIPSIYLELKVKLENEYALHRSIVDHYN----IPKTFDSDD--- 463
Query: 636 QAKVLVAPRSNN--------HM---DVTKLKKEFPEVL 662
L+ P + H+ + + F V
Sbjct: 464 ----LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 2e-09
Identities = 96/697 (13%), Positives = 209/697 (29%), Gaps = 210/697 (30%)
Query: 47 LDYCSSLKNLHPSRASPNF--KFLKGDITCADLMNYL---LVSEGIDTIMHFAAQTHVDN 101
+D+ + F F+ + C D+ + L E ID I+
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVD-NFDCKDVQDMPKSILSKEEIDHIIM--------- 56
Query: 102 SFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYG--ETDMESDIGNPEAS 157
+ + + GT L V++F+ Y + ++++ P
Sbjct: 57 --------SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS-- 106
Query: 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK-G 216
+ T Y + R Y + + N V + KL + LL ++
Sbjct: 107 --MMTRMYIEQR----------DRLYNDNQVFAKYN-VSRLQPY-LKL--RQALLELRPA 150
Query: 217 QQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVY--NVGT-KKERSVLDVAADICT 273
+ + I G + ++++ DV ++ V ++ N+ +VL++ +
Sbjct: 151 KNVLIDGVLGSGKTWV-ALDVCLSYKVQCKMD--FKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 274 LFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
+ + H +L+RL K K P+E L L L
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSI---QAELRRL-LKSK-PYENCL-LVLL---------- 251
Query: 334 DVTGALCPHPSVILLTDSCGNDDAFFLHNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKD 393
+V + +AF L C K L+ T +
Sbjct: 252 NVQ-----NAKAW---------NAFNLS-----C-----KILL--TT-----------RF 274
Query: 394 KGIAFEFGTGR-----LEDKNSLL--DDMKRVRPTHVLNAAGITGRPNVDWCESHRVETI 446
K + L+ + L D++K + +L + E +
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSL----LLKYLDCR-------PQDLPREVL 323
Query: 447 RTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSM-HPQGSSIGFKEDDEPNFTRSFYSK 505
TN +A+ ++ N+ D + SS+ EP R + +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKH---VNCDKLTTIIESSL---NVLEPAEYRKMFDR 377
Query: 506 TKAMVTFLSYLEIF---------VLVI--------CIECLIN-FQVEGLLK--AYENVCT 545
L +F +L + + ++N L++ E+ +
Sbjct: 378 ----------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 546 L-----RLRMPISSDLSNPRNFVTKLARYNKVVNIPNS---------------------- 578
+ L++ + ++ + R+ V YN +
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVD---HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 579 -MTVLDEMLPIA------IEMARRNCRGAWNFTNPGVISHNEILELYKEYI---DPQLK- 627
+ + +E R+ AWN + +++ + L+ YK YI DP+ +
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG-SILNTLQQLKFYKPYICDNDPKYER 543
Query: 628 ----WSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPE 660
+F + + ++ + + D+ ++ +
Sbjct: 544 LVNAILDFLPKIEENLICSK----YTDLLRIALMAED 576
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 6e-12
Identities = 55/316 (17%), Positives = 97/316 (30%), Gaps = 52/316 (16%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+L G G+ ++ L + I+ + + RAS + L
Sbjct: 6 GTLLSFGH-GYTARVLSRALAPQ--GWRIIGT-----SRNPDQMEAIRAS-GAEPLLWPG 56
Query: 73 TCADLMNYLLVSEGIDTIM-HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
L +G+ ++ A + D + + Q +
Sbjct: 57 EEPSL-------DGVTHLLISTAPDSGGD-------------PVLAALGDQIAARAAQFR 96
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
++ST VYG D + P P +A M + LP R
Sbjct: 97 WVGYLSTTAVYG------DHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFR 150
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
+YGP + P + + V S ++ D+A+ + R G
Sbjct: 151 LAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPG 202
Query: 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYF------LDDQKLKR 305
VYNV + DV A L L + + + R F + + ++K
Sbjct: 203 AVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKE 262
Query: 306 -LGWKEKTP-WEEGLK 319
LG + K P + GL+
Sbjct: 263 ELGVRLKYPNYRVGLE 278
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 51/259 (19%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
E ++ ++L+ GA G + ++ + L +E VA+ + + +
Sbjct: 15 ENLYFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVR----------NEEQGPELR 62
Query: 66 KFLKGDITCADLMNYLL-VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
+ DI A+L ID ++ A ++ + + G ++
Sbjct: 63 ERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP--HTGADKTILIDLW--GAIKTIQEA 118
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
+ G +KRFI VS+ G D + + Y K A+ + +
Sbjct: 119 EKRG-IKRFIMVSS---VGTVDPDQG--------PMNMRHYLVAKRLADDEL----KRSS 162
Query: 185 LP-TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-D 242
L TI + P + ++ + + S + + DVA+ +
Sbjct: 163 LDYTI----------------VRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAE 206
Query: 243 VILHRGVIGHVYNVGTKKE 261
++ + IG + V
Sbjct: 207 LVDQQHTIGKTFEVLNGDT 225
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 2e-11
Identities = 70/335 (20%), Positives = 105/335 (31%), Gaps = 85/335 (25%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITGA G +G + +L + E++ D D DIT
Sbjct: 14 KILITGANGQLGREIQKQL--KGKNVEVIPTDVQDL---------------------DIT 50
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+N + + +++ AA T VD N G L A G
Sbjct: 51 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEI 108
Query: 134 IHVSTDEV--------YGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHRS 182
+ +STD V E D NP Y TK E V A +
Sbjct: 109 VQISTDYVFDGEAKEPITEFD--------------EVNPQSAYGKTKLEGENFVKALNPK 154
Query: 183 YGLPTITTRGNNVYGP-NQFPEKLIPKFIL-LAMKGQQLPI----HGNGSNVRSYLYCAD 236
Y R +YG N F K ++ L +L + G + D
Sbjct: 155 Y----YIVRTAWLYGDGNNF-----VKTMINLGKTHDELKVVHDQVGTPT------STVD 199
Query: 237 VAEAFDVILHRGVIG--HVYNVGTKKERSVLDVAADICTLFKLEPE----KTIHYVQ--D 288
+A ++ G H G S D A +I L ++ + T + +
Sbjct: 200 LARVVLKVIDEKNYGTFHCTCKG---ICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAK 256
Query: 289 RPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLE 323
RP L + L+ W+E LK ++
Sbjct: 257 RPKYSV---LRNYMLELTTGDITREWKESLKEYID 288
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 3e-10
Identities = 52/258 (20%), Positives = 87/258 (33%), Gaps = 56/258 (21%)
Query: 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE----DKNSLLDDMKRVRPTHV 423
+K LI G G +G + K K K + T + + ++ +P V
Sbjct: 9 HHHHMKILITGANGQLGREIQKQLKGKNVEV-IPTDVQDLDITNVLAVNKFFNEKKPNVV 67
Query: 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHP 483
+N A T VD CE + N +G LA ++ +T Y +D
Sbjct: 68 INCAAHT---AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTD--YVFD---- 118
Query: 484 QGSSIG-FKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYEN 542
G + E DE N +S Y KTK E FV + + I
Sbjct: 119 -GEAKEPITEFDEVN-PQSAYGKTKLEG------ENFVKALNPKYYI------------- 157
Query: 543 VCTLRLRMPISSDLSNPRNFVT---KLARYNKVVNI-------PNSMTVLDEMLPIAIEM 592
+R + + NFV L + + + + P S L ++ +++
Sbjct: 158 ---VR----TAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV---LKV 207
Query: 593 ARRNCRGAWNFTNPGVIS 610
G ++ T G+ S
Sbjct: 208 IDEKNYGTFHCTCKGICS 225
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 4e-10
Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 23/182 (12%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSR-----ASPNFK 66
+ L+TG G G+++ L+ K Y + +VA S R + +
Sbjct: 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR------RSSDTRW--RLRELGIEGDIQ 66
Query: 67 FLKGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA 123
+ GD+ D + + + AAQ+ V S+ T + G LLEA
Sbjct: 67 YEDGDMA--DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQP-VTTGVVDGLGVTHLLEA 123
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+ RF ST E++G E + P +PY K + + Y S+
Sbjct: 124 IRQFSPETRFYQASTSEMFGLI---QAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF 180
Query: 184 GL 185
GL
Sbjct: 181 GL 182
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-10
Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 45/183 (24%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFKFL 68
KKI I GA G G + ++ YE+ L +L PS +
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRL----------PSEGPRPAHVV 51
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY--GTHVLLEACKL 126
GD+ A ++ + G D ++ G + + + G ++ A K
Sbjct: 52 VGDVLQAADVDKTV--AGQDAVIV---------LLGTRNDLSPTTVMSEGARNIVAAMKA 100
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
G V + + ++ + + + ++ R GL
Sbjct: 101 HG-VDKVVACTSAFLLWDPTKVPPR----------LQAVTDDHIRMHKVL----RESGLK 145
Query: 187 -TI 188
Sbjct: 146 YVA 148
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 38/181 (20%), Positives = 56/181 (30%), Gaps = 47/181 (25%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
IL+ G G +G + L P ++ALD S GD +
Sbjct: 2 NILLFGKTGQVGWELQRSLA---PVGNLIALD--------------VHSKE---FCGDFS 41
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + D I++ AA T VD + N + +A TG
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWV 99
Query: 134 IHVSTDEV--------YGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHRS 182
+H STD V + ETD T+P Y TK E +
Sbjct: 100 VHYSTDYVFPGTGDIPWQETD--------------ATSPLNVYGKTKLAGEKALQDNCPK 145
Query: 183 Y 183
+
Sbjct: 146 H 146
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 7e-07
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE------DKNSLLDDMKRVRPTHVLNA 426
L++GKTG +G L + G E + + + ++++RP ++NA
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNA 61
Query: 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGS 486
A T VD ES N +A E +++++T Y + G+
Sbjct: 62 AAHT---AVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD--YVFP-----GT 111
Query: 487 SIG-FKEDDEPNFTRSFYSKTKA 508
++E D + + Y KTK
Sbjct: 112 GDIPWQETDATS-PLNVYGKTKL 133
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 7e-10
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 23/182 (12%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSR-----ASPNFK 66
K+ LITG G G+++ L+ K Y Y S R + K
Sbjct: 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRR------SGEFASW--RLKELGIENDVK 55
Query: 67 FLKGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA 123
+ D+ + N + E + D + + AAQ+ V SF T + G +LEA
Sbjct: 56 IIHMDLL--EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQP-ILTAEVDAIGVLRILEA 112
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+ +F ST E++G+ +I E + P +PY+ K + + Y +Y
Sbjct: 113 LRTVKPDTKFYQASTSEMFGKV---QEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAY 169
Query: 184 GL 185
+
Sbjct: 170 NM 171
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--------PSRASP 63
K LITG G GS++ L+ K Y + I +S N P +P
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR------ASSFNTERVDHIYQDPHTCNP 55
Query: 64 NFKFLKGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVL 120
F GD++ D N + + D + + A +HV SF + E+T + + GT L
Sbjct: 56 KFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRL 112
Query: 121 LEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
LEA + G K RF ST E+YG +I E + P +PY+ K A + +
Sbjct: 113 LEAIRFLGLEKKTRFYQASTSELYGLV---QEIPQKETTPFYPRSPYAVAKLYAYWITVN 169
Query: 179 YHRSYGL 185
Y SYG+
Sbjct: 170 YRESYGM 176
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 8e-10
Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 44/263 (16%)
Query: 13 KKILITGAAGFIGSHVTNRLIK-NYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGD 71
+KI+I G G+IG + + ++P + D S L S ++G+
Sbjct: 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ + M +L + +D ++ + + ++ A K G +K
Sbjct: 65 MEEHEKMVSVL--KQVDIVISALPFPMISSQIH---------------IINAIKAAGNIK 107
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
RF+ +G + + L P K ++ + LP T
Sbjct: 108 RFLPSD----FG-----CEEDRIKP--LPPFESVLEKKR----IIRRAIEAAALPY-TYV 151
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
N + + + + + I+G G Y D+A+ I
Sbjct: 152 SANCF--GAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY--------TIK 201
Query: 252 HVYNVGTKKERSVLDVAADICTL 274
+ + +I +
Sbjct: 202 VACDPRCCNRIVIYRPPKNIISQ 224
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 1e-09
Identities = 36/191 (18%), Positives = 59/191 (30%), Gaps = 39/191 (20%)
Query: 2 SGEFEPASYKP-KKILITGAAGFIGSHVTNRLIKNYPDYEIVAL--DKLDYCSSLKNLHP 58
SG K +LI GA G I HV N+L + + + +P
Sbjct: 12 SGRENLYFQGHMKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQP----AKIHKPYP 66
Query: 59 SRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
+ + + GD+ + + +G D + +A T D +
Sbjct: 67 TNSQI----IMGDVLNHAALKQAM--QGQDIV--YANLTGEDLD------------IQAN 106
Query: 119 VLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
++ A K VKR I V + +Y E + N A +
Sbjct: 107 SVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAV-----IGEPLKPFRRAADAI-- 158
Query: 179 YHRSYGLP-TI 188
+ GL TI
Sbjct: 159 --EASGLEYTI 167
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 4e-09
Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 50/272 (18%)
Query: 2 SGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA 61
SG + KILI G G+IG+H+ +K + + + SS L
Sbjct: 1 SGHGMEENGMKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPN--SSKTTLLDEFQ 56
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
S +KG++ + + L+ + +D ++ A + +L
Sbjct: 57 SLGAIIVKGELDEHEKLVELM--KKVDVVISALAFPQIL---------------DQFKIL 99
Query: 122 EACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
EA K+ G +KRF+ +G + + L P K ++
Sbjct: 100 EAIKVAGNIKRFLPSD----FG-------VEEDRINALPPFEALIERKR----MIRRAIE 144
Query: 182 SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
+P N F I + ++ ++G G + Y D+
Sbjct: 145 EANIPYT------YVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLY- 197
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICT 273
I + + + +I T
Sbjct: 198 -------TIKVATDPRALNRVVIYRPSTNIIT 222
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH---------PSRAS 62
LITG G GS++ L+ K Y + IV SS N +
Sbjct: 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR------SSSFNTGRIEHLYKNPQAHIE 78
Query: 63 PNFKFLKGDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHV 119
N K GD+T D + + + I + AQ+HV SF + E+T + + GT
Sbjct: 79 GNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLR 135
Query: 120 LLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM 177
LL+A K G + +F ST E+YG+ +I E + P +PY A K A +V+
Sbjct: 136 LLDAVKTCGLINSVKFYQASTSELYGKV---QEIPQKETTPFYPRSPYGAAKLYAYWIVV 192
Query: 178 AYHRSYGL 185
+ +Y L
Sbjct: 193 NFREAYNL 200
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 6e-09
Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 37/231 (16%)
Query: 12 PKKILITGAAGFIGSHVTNRLIK-NYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLK 69
KILI G G IG H+ IK P Y +V + + L + S L+
Sbjct: 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI + + + + +D + A + I +++A K G
Sbjct: 62 GDINDHETLVKAI--KQVDIV--ICAAGRLL-------------IEDQVKIIKAIKEAGN 104
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
VK+F ++ D+ +A + P KA ++ + G+P
Sbjct: 105 VKKFFP---------SEFGLDVDRHDAVE--PVRQVFEEKASIRRVI----EAEGVPYTY 149
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
+ + + + + ++ I G+G+ +Y+ ADV
Sbjct: 150 LCCHAFT---GYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 8e-09
Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 36/237 (15%)
Query: 12 PKKILITGAAGFIGSHVTNRLIK-NYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+IL+ GA G+IG HV + +P + +V S L S + + G
Sbjct: 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 63
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
I + + + +D ++ ++ +++A K G V
Sbjct: 64 SIDDHASLVEAV--KNVDVVISTVGSLQIE---------------SQVNIIKAIKEVGTV 106
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
KRF +G +D+ N A + P KA + + G+P T
Sbjct: 107 KRFFPSE----FG-----NDVDNVHAVE--PAKSVFEVKAKVRRAI----EAEGIPY-TY 150
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
+N + + + + + L A ++ I G+G+ ++ D+ +
Sbjct: 151 VSSNCFA--GYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 205
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 41/243 (16%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL------DKLDYCSSLKNLHPSRASPN 64
K ++LI G G+IG + N I + L +D L A
Sbjct: 3 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGA--- 57
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
K ++ + + L + +D ++ A + ++I L+EA
Sbjct: 58 -KLIEASLDDHQRLVDAL--KQVDVVISALAGGVLS-----------HHILEQLKLVEAI 103
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
K G +KRF+ +G D E + L P + K +
Sbjct: 104 KEAGNIKRFLPSE----FG-----MDPDIMEHA-LQPGSITFIDKRKVR----RAIEAAS 149
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
+P N G F L + ++ I+G+G+ ++ DV
Sbjct: 150 IPYTYVSSNMFAG--YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS 207
Query: 245 LHR 247
+
Sbjct: 208 IDD 210
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 11 KPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKN------LHPSRASP 63
K LITG G GS++T L+ K Y + ++ SS N ++ +
Sbjct: 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRR------SSNFNTQRINHIYIDPHNV 80
Query: 64 NFKFLK---GDITCADLMNYLLVSEGI--DTIMHFAAQTHVDNSFGNSFEFTNN-NIYGT 117
N +K D+T D + + I D + + AAQ+HV SF ++T + G
Sbjct: 81 NKALMKLHYADLT--DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGA 137
Query: 118 HVLLEACKLTGQVK----RFIHVSTDEVYGETDMESDIGNP--EASQLLPTNPYSATKAG 171
LLEA + ++ + E++G P E + P +PY+A+K
Sbjct: 138 LRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS------TPPPQSETTPFHPRSPYAASKCA 191
Query: 172 AEMLVMAYHRSYGL 185
A + Y +YGL
Sbjct: 192 AHWYTVNYREAYGL 205
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 7e-07
Identities = 36/237 (15%), Positives = 60/237 (25%), Gaps = 49/237 (20%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ K + I GA+G G + +++ ++ + + L + N
Sbjct: 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR----RKLTFDEEA--YKNVNQEVV 70
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D L +Y +G D T + F + E K G
Sbjct: 71 DFE--KLDDYASAFQGHDVGFCCLGTTRGKA---GAEGFVRVDRDYVLKSAELAKAGG-C 124
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
K F +S+ G ++S Y K E V +
Sbjct: 125 KHFNLLSS------------KGADKSS----NFLYLQVKGEVEAKV----EELKFDRYSV 164
Query: 191 -RGNNVYGPNQ---FPEKLIPKFI--LLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
R + Q E L+ KF L + V A
Sbjct: 165 FRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVV-----------TVVRAM 210
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 54/251 (21%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
PK++L+ GA G G H+ +R++ +++A P
Sbjct: 2 HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP----------ARKALAEHPRLDNP 51
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
G + +L+ L IDT T + +F + + + G
Sbjct: 52 VGPLA--ELLPQLD--GSIDTAFCCLGTTIKEAGSEEAFR--AVDFDLPLAVGKRALEMG 105
Query: 129 QVKRFIHVSTDEVYGETDMESDIG-NPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
+ ++ VS +G + ++S Y+ K E + + G P
Sbjct: 106 -ARHYLVVSA------------LGADAKSS-----IFYNRVKGELEQAL----QEQGWPQ 143
Query: 188 IT-TRGNNVYGP--NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DV 243
+T R + ++GP +++ I + G+ I D+A A +
Sbjct: 144 LTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEA-----------CDLARALWRL 192
Query: 244 ILHRGVIGHVY 254
L G
Sbjct: 193 ALEEGKGVRFV 203
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 42/268 (15%), Positives = 82/268 (30%), Gaps = 42/268 (15%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P ++LI GA GFIG V + + I+A S + +
Sbjct: 5 PVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG-PRSPSKAKIFKALEDKGAI 63
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
+ G I + M +L ID ++ + L++A K
Sbjct: 64 IVYGLINEQEAMEKILKEHEIDIVVSTVGGESIL---------------DQIALVKAMKA 108
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
G +KRF+ ++ D+ + + P K LV G+P
Sbjct: 109 VGTIKRFLP---------SEFGHDVNRADP--VEPGLNMYREKRRVRQLV----EESGIP 153
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
N++ +P + I+G+G+ ++ D+ +
Sbjct: 154 FTYICCNSIAS---WPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKF------ 204
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTL 274
+ V +V T + + + +
Sbjct: 205 --TMKTVDDVRTLNKSVHFRPSCNCLNI 230
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 5e-06
Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 36/178 (20%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA--SPNFKFLKGD 71
I I GAAG I +T L+ D I LK P ++G
Sbjct: 7 YITILGAAGQIAQXLTATLLTY-TDMHITLY-----GRQLKTRIPPEIIDHERVTVIEGS 60
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ + + + F S + +++A ++
Sbjct: 61 FQNPGXLEQAV--TNAEVV--FVG-------AMESGSDMAS-------IVKALSRXN-IR 101
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP-TI 188
R I VS + GE + + + Y + A ++ R L TI
Sbjct: 102 RVIGVSMAGLSGEFPVALEKWTFDN----LPISYVQGERQARNVL----RESNLNYTI 151
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 32/147 (21%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
P + ITG+ G +G +T +L +E++ L R P G
Sbjct: 146 SPLTVAITGSRGLVGRALTAQLQTG--GHEVIQL--------------VRKEPK----PG 185
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF--EFTNNNIYGTHVLLEACKLTG 128
L + +G D ++H A + + F +S + + T L E +
Sbjct: 186 KRFWDPLNPASDLLDGADVLVHLAGEP-IFGRFNDSHKEAIRESRVLPTKFLAELVAEST 244
Query: 129 QVKRFIHVS---------TDEVYGETD 146
Q I S DE+ E
Sbjct: 245 QCTTMISASAVGFYGHDRGDEILTEES 271
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 42/327 (12%), Positives = 95/327 (29%), Gaps = 69/327 (21%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL----DKLDYCSSLKNLHPSRASPNFKF 67
K +++ G G G V L+++ +++ + K + K L +
Sbjct: 5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRK----KAAKEL----RLQGAEV 55
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
++GD +M L G F + ++ + + +
Sbjct: 56 VQGDQDDQVIMELAL--NGAYAT--FIVTNYWESCSQEQEVKQGKLLA------DLARRL 105
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
G + ++ + + + + K E Y R G+P
Sbjct: 106 G-LHYVVYSGLE------------NIKKLTAGRLAAAHFDGKGEVE----EYFRDIGVPM 148
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMK-GQQLPIHGNGSNVR-SYLYCADVAE-AFDVI 244
+ R + E L+ F+ G+ + +V + +D+ ++
Sbjct: 149 TSVR------LPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLL 202
Query: 245 LHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL 303
+G + T + + AA L K +H + + +
Sbjct: 203 KMPEKYVGQNIGLST-CRHTAEEYAA----LLTKHTRKVVHDAK----------MTPEDY 247
Query: 304 KRLGWKEKTPWEEGLKLTLEWYKKNPH 330
++LG+ P L +Y P
Sbjct: 248 EKLGF----PGARDLANMFRFYALRPD 270
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVAL 44
I +TGA G +G V L+K P +I+A+
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAI 32
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVAL 44
I ITGA G +G +V L+K P +IVA+
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAI 31
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 684 | |||
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.98 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.98 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.98 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.97 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.97 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.97 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.96 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.94 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.94 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.93 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.93 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.92 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.91 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.91 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.91 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.91 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.91 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.91 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.91 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.9 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.9 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.9 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.9 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.89 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.89 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.89 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.89 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.89 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.88 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.88 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.87 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.87 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.86 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.86 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.86 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.86 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.86 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.86 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.85 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.85 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.85 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.85 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.85 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.84 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.84 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.84 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.84 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.84 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.84 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.84 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.83 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.83 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.83 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.83 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.82 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.82 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.82 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.82 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.82 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.82 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.82 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.82 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.82 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.82 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.82 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.81 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.81 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.81 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.81 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.81 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.81 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.81 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.81 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.81 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.81 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.81 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.81 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.81 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.81 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.81 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.81 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.81 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.8 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.8 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.8 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.8 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.8 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.8 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.8 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.8 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.8 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.8 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.8 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.8 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.8 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.8 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.79 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.79 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.79 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.79 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.79 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.79 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.79 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.79 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.79 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.79 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.79 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.79 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.78 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.78 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.78 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.78 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.78 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.78 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.78 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.78 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.78 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.78 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.78 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.78 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.78 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.78 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.78 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.78 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.78 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.78 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.78 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.78 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.77 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.77 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.77 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.77 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.77 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.77 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.77 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.77 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.77 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.77 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.77 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.77 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.77 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.77 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.77 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.77 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.77 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.77 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.77 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.77 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.77 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.77 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.77 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.77 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.77 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.77 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.77 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.77 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.76 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.76 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.76 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.76 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.76 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.76 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.76 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.76 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.76 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.76 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.76 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.76 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.76 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.76 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.76 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.76 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.75 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.75 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.75 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.75 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.75 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.75 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.75 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.75 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.75 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.75 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.75 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.75 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.74 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.74 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.74 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.74 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.74 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.74 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.74 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.73 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.73 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.73 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.73 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.73 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.72 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.72 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.72 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.72 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.72 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.72 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.71 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.71 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.71 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.71 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.71 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.71 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.71 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.7 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.7 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.7 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.7 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.7 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.69 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.69 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.69 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.68 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.68 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.68 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.68 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.67 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.67 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.67 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.67 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.67 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.67 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.66 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.66 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.66 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.65 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.65 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.65 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.65 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.65 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.65 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.65 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.65 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.65 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.64 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.63 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.63 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.63 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.63 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.63 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.63 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.63 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.62 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.62 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.62 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.62 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.62 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.62 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.61 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.61 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.61 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.61 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.61 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.61 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.61 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.61 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.6 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.6 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.6 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.6 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.6 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.6 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.6 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.6 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.6 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.6 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.6 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.6 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.59 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.59 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.59 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.59 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.59 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.59 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.59 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.59 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.59 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.59 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.59 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.59 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.59 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.59 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.59 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.59 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.58 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.58 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.58 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.58 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.58 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.58 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.58 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.58 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.58 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.58 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.58 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.58 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.58 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.58 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.57 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.57 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.57 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.57 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.57 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.57 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.57 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.57 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.57 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.57 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.57 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.57 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.57 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.57 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.57 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.57 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.56 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.56 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.56 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.56 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.56 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.56 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.56 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.56 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.56 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.56 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.56 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.56 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.55 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.55 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.55 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.55 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.55 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.55 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.55 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.55 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.55 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.55 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.54 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.54 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.54 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.54 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.54 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.54 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.54 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.54 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.53 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.53 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.53 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.53 |
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=384.51 Aligned_cols=324 Identities=40% Similarity=0.748 Sum_probs=272.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.+.+|+|||||||||||++|+++|+++|+.++|++++|.........+......++++++.+|+.|.+.+..++...++|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 34568999999999999999999999955599999998754444444444444568999999999999999999655699
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+......++.++...+++|+.++.+++++|++.+ +++|||+||.++||..... .+.+|+++..|.+.|+.+
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~--~~~~E~~~~~p~~~Y~~s 177 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKT--GRFTEETPLAPNSPYSSS 177 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSS--CCBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcC--CCcCCCCCCCCCChhHHH
Confidence 9999999877666667788899999999999999999987 8999999999999976422 334788888999999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|.++|.+++.++++++++++++||++|||++..+..+++.++..+..++++.+++++...++|+|++|+|++++.+++++
T Consensus 178 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 257 (346)
T 4egb_A 178 KASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG 257 (346)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 99999999999988899999999999999988777889999999999999999999999999999999999999999988
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
..+++||+++++++|+.|+++.+.+.+|.+.+ .+.+.+..+.....+.+|++|+++ |||+|+++++++|+++++||++
T Consensus 258 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 336 (346)
T 4egb_A 258 RVGEVYNIGGNNEKTNVEVVEQIITLLGKTKK-DIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEK 336 (346)
T ss_dssp CTTCEEEECCSCCEEHHHHHHHHHHHHTCCGG-GCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCceeHHHHHHHHHHHhCCCcc-cccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 78889999999999999999999999998654 234444444445567799999987 9999999999999999999999
Q ss_pred CCCcccccc
Q 035631 328 NPHWWGDVT 336 (684)
Q Consensus 328 ~~~~~~~~~ 336 (684)
+.+||....
T Consensus 337 ~~~~~~~~~ 345 (346)
T 4egb_A 337 NEEWWKPLK 345 (346)
T ss_dssp CHHHHGGGC
T ss_pred hhhhhhhcc
Confidence 999887653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=359.38 Aligned_cols=304 Identities=21% Similarity=0.280 Sum_probs=255.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+|+|||||||||||++|++.|+++ |++|++++|++. ... + ++++++.+|+. .+.+.+++ .++|+|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~-~------~~~~~~~~Dl~-~~~~~~~~--~~~d~V 66 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIG--NKA-I------NDYEYRVSDYT-LEDLINQL--NDVDAV 66 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--TTCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCC--ccc-C------CceEEEEcccc-HHHHHHhh--cCCCEE
Confidence 4589999999999999999999999 899999999731 111 1 27899999999 99999998 699999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+..... ++...+++|+.++.+++++|++.+ ++||||+||.++||.....+ .+|+++..|.+.|+.+|.
T Consensus 67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y~~sK~ 138 (311)
T 3m2p_A 67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLP---WNEKELPLPDLMYGVSKL 138 (311)
T ss_dssp EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCS---BCTTSCCCCSSHHHHHHH
T ss_pred EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC---CCCCCCCCCCchhHHHHH
Confidence 9999986543 566788999999999999999987 89999999999999765433 477888899999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
++|.+++.++++.+++++++||+++||++..+..+++.++..+..++++.++++++..++|+|++|+|+++..+++++..
T Consensus 139 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~ 218 (311)
T 3m2p_A 139 ACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV 218 (311)
T ss_dssp HHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC
Confidence 99999999998889999999999999998866678999999999999999988999999999999999999999998777
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC-CCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhC
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD-RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
+++||+++++.+|+.|+++.+.+.+|.+.. +...+. .........+|++|+++ |||+|+++++++|+++++|++++
T Consensus 219 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 296 (311)
T 3m2p_A 219 SGTFNIGSGDALTNYEVANTINNAFGNKDN--LLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL 296 (311)
T ss_dssp CEEEEECCSCEECHHHHHHHHHHHTTCTTC--EEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred CCeEEeCCCCcccHHHHHHHHHHHhCCCCc--ceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence 899999999999999999999999998654 333333 34445567899999998 99999999999999999999999
Q ss_pred CCcccccccC
Q 035631 329 PHWWGDVTGA 338 (684)
Q Consensus 329 ~~~~~~~~~~ 338 (684)
.+.|...+|-
T Consensus 297 ~~~~~~~~~~ 306 (311)
T 3m2p_A 297 DDVPLWYEGH 306 (311)
T ss_dssp ----------
T ss_pred ccCcceeccc
Confidence 9887766653
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=359.47 Aligned_cols=321 Identities=41% Similarity=0.732 Sum_probs=262.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+|||||||||||+++++.|++++++++|++++|.........+.......+++++.+|+.|.+.+.+++ .++|+|
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v 79 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV--RKVDGV 79 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH--HTCSEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh--hCCCEE
Confidence 347899999999999999999999955599999998643222233322222457899999999999999988 789999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+......+..++...+++|+.++.+++++|.+.+..++|||+||.++||..... +.+|.++..|.+.|+.+|.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~---~~~E~~~~~~~~~Y~~sK~ 156 (336)
T 2hun_A 80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKG---SFTENDRLMPSSPYSATKA 156 (336)
T ss_dssp EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSS---CBCTTBCCCCCSHHHHHHH
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCC---CcCCCCCCCCCCccHHHHH
Confidence 9999976543344567789999999999999999987634799999999999876432 3467778888999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
++|.+++.++.+++++++++||++|||++..+..+++.++..+..+.++.+++++.+.++|+|++|+|++++.++++...
T Consensus 157 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 236 (336)
T 2hun_A 157 ASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236 (336)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC
Confidence 99999999988889999999999999998765677888888888888888888888899999999999999999987777
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
+++||+++++.+|+.|+++.+.+.+|.+.+ .+.+.+..+.....+.+|++|+++ |||+|.++++++|+++++|++++.
T Consensus 237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 315 (336)
T 2hun_A 237 REIYNISAGEEKTNLEVVKIILRLMGKGEE-LIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNE 315 (336)
T ss_dssp TCEEEECCSCEECHHHHHHHHHHHTTCCST-TEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHTH
T ss_pred CCEEEeCCCCcccHHHHHHHHHHHhCCCcc-cccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 889999999999999999999999997643 233333333333456789999988 999999999999999999999887
Q ss_pred Cccccccc
Q 035631 330 HWWGDVTG 337 (684)
Q Consensus 330 ~~~~~~~~ 337 (684)
.|+.+...
T Consensus 316 ~~~~~~~~ 323 (336)
T 2hun_A 316 WWWKPLVD 323 (336)
T ss_dssp HHHGGGCC
T ss_pred cceeeccC
Confidence 66654433
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=357.30 Aligned_cols=325 Identities=39% Similarity=0.709 Sum_probs=264.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhc-CCC---cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKN-YPD---YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~-~~g---~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
|+|||||||||||++++++|+++ ++| ++|++++|.........+.......+++++.+|+.|.+.+.+++ .++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh--cCCC
Confidence 58999999999999999999995 657 99999999642222222221112357899999999999999988 7999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.... .+.+|+++..|.+.|+.+
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~---~~~~E~~~~~~~~~Y~~s 154 (337)
T 1r6d_A 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDS---GSWTESSPLEPNSPYAAS 154 (337)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSS---SCBCTTSCCCCCSHHHHH
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCC---CCCCCCCCCCCCCchHHH
Confidence 9999999765433345677899999999999999999987 889999999999987643 234677788889999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|.++|.+++.++.+++++++++||+++||++..+..+++.++..+..+.++.+++++++.++|+|++|+|+++..+++++
T Consensus 155 K~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 234 (337)
T 1r6d_A 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (337)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence 99999999999888899999999999999987666788888888888888888888999999999999999999999877
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
..+++||+++++++|+.|+++.+.+.+|.+.+ .+.+.+..+.....+.+|++|+++ |||+|.++++++|+++++|+++
T Consensus 235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 313 (337)
T 1r6d_A 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (337)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGG-GEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcc-cceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 77889999999999999999999999997643 233333333333456789999987 9999999999999999999999
Q ss_pred CCCcccccccCCCCCCc
Q 035631 328 NPHWWGDVTGALCPHPS 344 (684)
Q Consensus 328 ~~~~~~~~~~~~~~~~~ 344 (684)
+.+|+.+........|.
T Consensus 314 ~~~~~~~~~~~~~~~~~ 330 (337)
T 1r6d_A 314 NRGWWEPLKATAPQLPA 330 (337)
T ss_dssp CHHHHGGGC--------
T ss_pred chhccccccccccCCCc
Confidence 88777766554444444
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=362.43 Aligned_cols=312 Identities=27% Similarity=0.427 Sum_probs=261.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCC---CCCCceEEEecCCCHHHHHHhhcc
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSR---ASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
+++|+|||||||||||++|++.|+++ |++|++++|+...... ..+.... ...+++++.+|+.|.+.+..++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 98 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-- 98 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 35689999999999999999999999 8999999996532110 0000000 0057899999999999999998
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCCh
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP 164 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 164 (684)
.++|+|||+|+......+..++...+++|+.++.+|+++|++.+ +++|||+||.++||..... +.+|+++..|.+.
T Consensus 99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~---~~~E~~~~~p~~~ 174 (351)
T 3ruf_A 99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPAL---PKVEENIGNPLSP 174 (351)
T ss_dssp TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCS---SBCTTCCCCCCSH
T ss_pred cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCC---CCccCCCCCCCCh
Confidence 69999999999876555667788899999999999999999987 8999999999999876543 3478888899999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
|+.+|.++|.+++.++++++++++++||++|||++..+. .+++.++..+..++++.+++++++.++|+|++|+|++
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999999999888899999999999999987554 6788899999999999999999999999999999999
Q ss_pred HHHHHhc--CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCc---ceeeccCCCCCCcceecCHHHHHh-cCCcccCCH
Q 035631 241 FDVILHR--GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK---TIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPW 314 (684)
Q Consensus 241 i~~~~~~--~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~ 314 (684)
++.++.. ...+++||+++++.+|+.|+++.+.+.+|..+.. .....+..+.......+|++|+++ |||+|++++
T Consensus 255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 334 (351)
T 3ruf_A 255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKI 334 (351)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCH
T ss_pred HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCH
Confidence 9999986 3467899999999999999999999999873321 122222333344567899999998 999999999
Q ss_pred HHHHHHHHHHHHhCC
Q 035631 315 EEGLKLTLEWYKKNP 329 (684)
Q Consensus 315 ~e~i~~~i~~~~~~~ 329 (684)
+++|+++++||+++.
T Consensus 335 ~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 335 REGLRLSMPWYVRFL 349 (351)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998753
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=348.54 Aligned_cols=313 Identities=26% Similarity=0.365 Sum_probs=256.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
++|+|||||||||||+++++.|+++ |++|++++|+...... ..+.. ....+++++.+|+.|.+.+.+++...++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEK-ITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHH-HHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHh-hcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 4579999999999999999999999 8999999996532110 00000 01246889999999999999999666999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+.........++...++.|+.++.+++++|++.+ +++|||+||.++||..... +.+|..+..|.+.|+.+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~---~~~e~~~~~~~~~Y~~s 156 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERS---PIDETFPLSATNPYGQT 156 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSS---SBCTTSCCBCSSHHHHH
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCC---CCCCCCCCCCCChhHHH
Confidence 9999999876554556777899999999999999999987 8999999999999876543 34677888899999999
Q ss_pred HHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCC----------CCChHHHHHHHHHcC-CceEEec------CCCceEe
Q 035631 169 KAGAEMLVMAYHRSYG-LPTITTRGNNVYGPNQF----------PEKLIPKFILLAMKG-QQLPIHG------NGSNVRS 230 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~ 230 (684)
|.++|.+++.++.+++ ++++++||+++||++.. ...+++.+....... .++.+++ ++++.++
T Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 157 KLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 9999999999988875 99999999999998531 235666555544433 5666667 7889999
Q ss_pred cccHHHHHHHHHHHHhc---CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-c
Q 035631 231 YLYCADVAEAFDVILHR---GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~---~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l 306 (684)
|+|++|+|++++.++++ ...+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++ |
T Consensus 237 ~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~l 314 (341)
T 3enk_A 237 YIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVP--YELVARRPGDVAECYANPAAAAETI 314 (341)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHHHHHHH
T ss_pred eEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcc--eeeCCCCCCCccccccCHHHHHHHc
Confidence 99999999999999976 356789999999999999999999999998654 34444445555667899999987 9
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCCcc
Q 035631 307 GWKEKTPWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~~~~~~ 332 (684)
||+|+++++++|+++++|++++++.|
T Consensus 315 G~~p~~~l~~~l~~~~~~~~~~~~~~ 340 (341)
T 3enk_A 315 GWKAERDLERMCADHWRWQENNPRGF 340 (341)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCccC
Confidence 99999999999999999999987653
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=350.82 Aligned_cols=316 Identities=36% Similarity=0.617 Sum_probs=260.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
||+|||||||||||+++++.|+++++|++|++++|+........+... ...+++++.+|+.|.+.+.+++ .++|+||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 80 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLA--AKADAIV 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-ccCCeEEEECCCCCHHHHHHHh--hcCCEEE
Confidence 479999999999999999999998667999999996432221221111 1257899999999999999998 6789999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCC---------CCCCCCCCCCCCCC
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME---------SDIGNPEASQLLPT 162 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~---------~~~~~~e~~~~~p~ 162 (684)
|+|+......+..++...+++|+.++.+++++|.+.+ + +|||+||.++||..... ...+.+|.++..|.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 158 (348)
T 1oc2_A 81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 158 (348)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC
Confidence 9999765433445677899999999999999999987 5 99999999999865320 01234677788888
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
+.|+.+|.++|.+++.++.+++++++++||+++||++.....+++.++..+..+.++.+++++...++|+|++|+|++++
T Consensus 159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 238 (348)
T 1oc2_A 159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 238 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence 99999999999999999888899999999999999987656778888888888888888888889999999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCC-HHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTP-WEEGLKL 320 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~-~~e~i~~ 320 (684)
.+++.+..+++||+++++++|+.|+++.+.+.+|.+.+ .+.+.+..+.....+.+|++|+++ |||+|+++ ++++|++
T Consensus 239 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~ 317 (348)
T 1oc2_A 239 AILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEE 317 (348)
T ss_dssp HHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHH
T ss_pred HHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc-ccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHH
Confidence 99987777889999999999999999999999997643 123333333333456789999987 99999988 9999999
Q ss_pred HHHHHHhCCCccc
Q 035631 321 TLEWYKKNPHWWG 333 (684)
Q Consensus 321 ~i~~~~~~~~~~~ 333 (684)
+++|++++..++.
T Consensus 318 ~~~~~~~~~~~~~ 330 (348)
T 1oc2_A 318 TIQWYTDNQDWWK 330 (348)
T ss_dssp HHHHHHHTHHHHH
T ss_pred HHHHHHHhhhhcc
Confidence 9999998866544
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=347.75 Aligned_cols=300 Identities=29% Similarity=0.462 Sum_probs=246.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
||+|||||||||||++|++.|+++ |+ ++++++... ..... ...+++++.+|+.+ +.+.+++ .++|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~-~v~~~~~~~-~~~~~-----~~~~~~~~~~Dl~~-~~~~~~~--~~~d~vi 68 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--NE-IVVIDNLSS-GNEEF-----VNEAARLVKADLAA-DDIKDYL--KGAEEVW 68 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--SC-EEEECCCSS-CCGGG-----SCTTEEEECCCTTT-SCCHHHH--TTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CC-EEEEEcCCC-CChhh-----cCCCcEEEECcCCh-HHHHHHh--cCCCEEE
Confidence 368999999999999999999999 74 444544321 11111 13578999999999 8888888 6999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.....+ .+|+.+..|.+.|+.+|.+
T Consensus 69 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~---~~E~~~~~~~~~Y~~sK~~ 144 (313)
T 3ehe_A 69 HIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIP---TPEDYPTHPISLYGASKLA 144 (313)
T ss_dssp ECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSS---BCTTSCCCCCSHHHHHHHH
T ss_pred ECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCC---CCCCCCCCCCCHHHHHHHH
Confidence 9999876666778899999999999999999999987 89999999999999765433 4677788899999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC-CceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG-QQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
+|.+++.++.+++++++++||++|||++... .++..++..+..+ .++.+++++++.++|+|++|+|++++.+++....
T Consensus 145 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 223 (313)
T 3ehe_A 145 CEALIESYCHTFDMQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER 223 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhcCCCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999997653 5677777776665 6677889999999999999999999999996667
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC---CCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHh
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD---RPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
+++||+++++++|+.|+++.+.+.+|.++. +...+. .........+|++|+++|||+|+++++++|+++++|+++
T Consensus 224 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~ 301 (313)
T 3ehe_A 224 VNIFNIGSEDQIKVKRIAEIVCEELGLSPR--FRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301 (313)
T ss_dssp EEEEECCCSCCEEHHHHHHHHHHHTTCCCE--EEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred CceEEECCCCCeeHHHHHHHHHHHhCCCCc--eEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 789999999999999999999999998754 332221 112223467899999889999999999999999999998
Q ss_pred CCC
Q 035631 328 NPH 330 (684)
Q Consensus 328 ~~~ 330 (684)
+++
T Consensus 302 ~~~ 304 (313)
T 3ehe_A 302 DLD 304 (313)
T ss_dssp HHH
T ss_pred Ccc
Confidence 764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=343.04 Aligned_cols=301 Identities=27% Similarity=0.399 Sum_probs=252.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
..|+|||||||||||+++++.|+++ |++|++++|+... .. .+++++.+|+.|.+.+.+++...++|+|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~---~~-------l~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA---KL-------PNVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC---CC-------TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc---cc-------ceeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 4589999999999999999999999 8999999997532 11 1688999999999999998854569999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCC--CCCCCCCCCCCCCCCCCChhHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGET--DMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~--~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
||+|+......++.++...+++|+.++.+++++|++.+.+++|||+||.++||.. .. .+.+|+++..|.+.|+.+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~---~~~~E~~~~~~~~~Y~~s 155 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEE---SPVSEENQLRPMSPYGVS 155 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGG---CSBCTTSCCBCCSHHHHH
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCC---CCCCCCCCCCCCCccHHH
Confidence 9999987655556688899999999999999999876337999999999999865 22 234677788889999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc---C--CceEEecCCCceEecccHHHHHHHHHH
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK---G--QQLPIHGNGSNVRSYLYCADVAEAFDV 243 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~i~~ 243 (684)
|.++|.+++.++.+++++++++||+++||++.....+++.++..+.. + .++..+++++..++|+|++|+|++++.
T Consensus 156 K~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 235 (321)
T 2pk3_A 156 KASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL 235 (321)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence 99999999999888899999999999999987655677777776665 6 577777888889999999999999999
Q ss_pred HHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHH
Q 035631 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKL 320 (684)
Q Consensus 244 ~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~ 320 (684)
++.++..+++||+++++.+|+.|+++.+.+.+|.+.+ +...+ ..+.......+|++|+++ |||+|+++++++|++
T Consensus 236 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~ 313 (321)
T 2pk3_A 236 LSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKID--TELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFE 313 (321)
T ss_dssp HHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCE--EEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred HHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCc--eeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHH
Confidence 9988766789999999999999999999999997543 22222 223333557899999988 999999999999999
Q ss_pred HHHHHHhC
Q 035631 321 TLEWYKKN 328 (684)
Q Consensus 321 ~i~~~~~~ 328 (684)
+++|++++
T Consensus 314 ~~~~~~~~ 321 (321)
T 2pk3_A 314 ILQSYRQA 321 (321)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999864
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=342.10 Aligned_cols=298 Identities=31% Similarity=0.466 Sum_probs=247.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||++|++.|+++ |++|++++|+..... . ....+++++.+|+.|.+ +.+++ .+ |+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~----~~~~~~~~~~~Dl~d~~-~~~~~--~~-d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRR--E----FVNPSAELHVRDLKDYS-WGAGI--KG-DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCG--G----GSCTTSEEECCCTTSTT-TTTTC--CC-SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCch--h----hcCCCceEEECccccHH-HHhhc--CC-CEEEE
Confidence 68999999999999999999999 899999999753211 1 11357899999999998 77777 34 99999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.....+ .+|+.+..|.+.|+.+|.++
T Consensus 69 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~---~~e~~~~~p~~~Y~~sK~~~ 144 (312)
T 3ko8_A 69 FAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIP---TPEEEPYKPISVYGAAKAAG 144 (312)
T ss_dssp CCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHHHHHH
T ss_pred CCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCC---CCCCCCCCCCChHHHHHHHH
Confidence 999876666778899999999999999999999987 89999999999999765433 46778888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC-CceEEecCCCceEecccHHHHHHHHHHHHhc----
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG-QQLPIHGNGSNVRSYLYCADVAEAFDVILHR---- 247 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~---- 247 (684)
|.+++.++.+++++++++||+++||++... .++..++..+..+ ..+.+++++++.++|+|++|+|++++.++++
T Consensus 145 e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 223 (312)
T 3ko8_A 145 EVMCATYARLFGVRCLAVRYANVVGPRLRH-GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM 223 (312)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCS-SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCEEEEeeccccCcCCCC-ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc
Confidence 999999998889999999999999998653 5666777766665 5677888999999999999999999999987
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC------CCCCCcceecCHHHHHh-cCCcccCCHHHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD------RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKL 320 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~------~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~ 320 (684)
...+++||+++++.+|+.|+++.+.+.+|.++. +...+. .+.......+|++|+++ |||+|+++++++|++
T Consensus 224 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~ 301 (312)
T 3ko8_A 224 DAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKK 301 (312)
T ss_dssp CCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCE--EEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHH
T ss_pred CCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCc--eeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHH
Confidence 456789999999999999999999999998754 222211 12233456799999966 999999999999999
Q ss_pred HHHHHHhCC
Q 035631 321 TLEWYKKNP 329 (684)
Q Consensus 321 ~i~~~~~~~ 329 (684)
+++|+++++
T Consensus 302 ~~~~~~~~~ 310 (312)
T 3ko8_A 302 TAEDLAKEL 310 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999998764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=357.68 Aligned_cols=314 Identities=23% Similarity=0.373 Sum_probs=253.2
Q ss_pred CCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCC-CHHHHHHhhcc
Q 035631 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT-CADLMNYLLVS 84 (684)
Q Consensus 6 ~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~ 84 (684)
.|..|++|+|||||||||||++|++.|++++ |++|++++|+.. ....+ ....+++++.+|+. |.+.+.+++
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~--~~~~~---~~~~~v~~~~~Dl~~d~~~~~~~~-- 89 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDMQTD--RLGDL---VKHERMHFFEGDITINKEWVEYHV-- 89 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEESCCT--TTGGG---GGSTTEEEEECCTTTCHHHHHHHH--
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeCChh--hhhhh---ccCCCeEEEeCccCCCHHHHHHHh--
Confidence 3556678999999999999999999999973 689999999752 11111 12358999999999 999999988
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC-----
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL----- 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~----- 159 (684)
.++|+|||+|+......+..++...+++|+.++.+|+++|++.+ ++|||+||.++||.....+. .|.++.
T Consensus 90 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~---~e~~~~~~~~p 164 (372)
T 3slg_A 90 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQF---DPDASALTYGP 164 (372)
T ss_dssp HHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSB---CTTTCCEEECC
T ss_pred ccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCC---CccccccccCC
Confidence 58999999999877655556788899999999999999999987 89999999999998654332 333322
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCceEEecCCCceE
Q 035631 160 --LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--------EKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 160 --~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.|.+.|+.+|.++|.+++.++++ +++++++||++|||++... ..+++.++..+..++++.+++++++.+
T Consensus 165 ~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 243 (372)
T 3slg_A 165 INKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR 243 (372)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence 56679999999999999999887 9999999999999998542 347888999999999999999899999
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecC-CCccCHHHHHHHHHHHhCCCCCccee-----ecc--C------CCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGT-KKERSVLDVAADICTLFKLEPEKTIH-----YVQ--D------RPFN 292 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~~~~~~-----~~~--~------~~~~ 292 (684)
+|+|++|+|++++.+++++ ..+++||+++ ++.+|+.|+++.+.+.+|.++..... ..+ . ....
T Consensus 244 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 3slg_A 244 AFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQD 323 (372)
T ss_dssp ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC------------
T ss_pred EEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccc
Confidence 9999999999999999876 4688999999 48999999999999999876442110 000 0 0012
Q ss_pred CcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 293 ~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
.....+|++|+++ |||+|+++++++|+++++||+++.+.++
T Consensus 324 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 365 (372)
T 3slg_A 324 VQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADAR 365 (372)
T ss_dssp -CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHHHH
T ss_pred cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999988 9999999999999999999988765443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=341.37 Aligned_cols=308 Identities=28% Similarity=0.443 Sum_probs=250.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
||+|||||||||||++++++|+++ |++|++++|...... ..+ ..+++++.+|+.|.+.+.+++...++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHE-DAI-----TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GGS-----CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCch-hhc-----CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 478999999999999999999999 899999998643211 111 137899999999999999988545899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||..... +.+|+++..|.+.|+.+|.+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~---~~~E~~~~~~~~~Y~~sK~~ 148 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVD---LITEETMTNPTNTYGETKLA 148 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSS---SBCTTSCCCCSSHHHHHHHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCC---CCCcCCCCCCCChHHHHHHH
Confidence 9999765433445677899999999999999999987 8999999999999875432 34677788889999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHc-CCceEEec------CCCceEecccHH
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQF---------PEKLIPKFILLAMK-GQQLPIHG------NGSNVRSYLYCA 235 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~ 235 (684)
+|.+++.++.+++++++++||+++||++.. ...+++.+...... +..+.+++ ++++.++|+|++
T Consensus 149 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 149 IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp HHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred HHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 999999998888999999999999999621 23566666655543 34566665 677889999999
Q ss_pred HHHHHHHHHHhcCC---CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCccc
Q 035631 236 DVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311 (684)
Q Consensus 236 D~a~~i~~~~~~~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~ 311 (684)
|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.+ +...+..........+|++|+++ |||+|+
T Consensus 229 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 306 (330)
T 2c20_A 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP--AEVAPRRAGDPARLVASSQKAKEKLGWDPR 306 (330)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC--EEEECCCSSCCSEECBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCCcccccccCHHHHHHHhCCCCc
Confidence 99999999997632 3689999999999999999999999997654 23333333334467899999987 999999
Q ss_pred C-CHHHHHHHHHHHHHhCCCccc
Q 035631 312 T-PWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 312 ~-~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+ +++++|+++++|++++.+++.
T Consensus 307 ~~~l~~~l~~~~~~~~~~~~~~~ 329 (330)
T 2c20_A 307 YVNVKTIIEHAWNWHQKQPNGYE 329 (330)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCCC
T ss_pred cCCHHHHHHHHHHHHHHhhhccC
Confidence 8 999999999999999886643
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=348.22 Aligned_cols=319 Identities=43% Similarity=0.718 Sum_probs=259.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||+++++.|++.+ |++|++++|+........+.......+++++.+|+.|.+.+.+++...++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT-QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcC-CCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 579999999999999999999973 5899999986532222333222224578999999999999999885448999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc--CCCc-------EEEEEeCcccccCCCCC-------CCCCCCCC
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT--GQVK-------RFIHVSTDEVYGETDME-------SDIGNPEA 156 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~-------~~i~~SS~~vyg~~~~~-------~~~~~~e~ 156 (684)
+|+......+..++...+++|+.++.+++++|.+. + ++ +|||+||.++||..... ...+.+|+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~ 158 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence 99976543344567789999999999999999987 6 66 99999999999865310 00134677
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
++..|.+.|+.+|.++|.+++.++.+++++++++||++|||++..+..+++.++..+..+.++.+++++...++|+|++|
T Consensus 159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 77888999999999999999999888899999999999999987656678888888888888888888889999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCc------ceeeccCCCCCCcceecCHHHHHh-cCCc
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK------TIHYVQDRPFNDHRYFLDDQKLKR-LGWK 309 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~------~~~~~~~~~~~~~~~~~d~~k~~~-lg~~ 309 (684)
+|++++.+++++..+++||+++++++|+.|+++.+.+.+|...+. .+.+.+..+.....+.+|++|+++ |||+
T Consensus 239 va~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (361)
T 1kew_A 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCC
Confidence 999999999877778899999999999999999999998864321 122223333233456789999988 9999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccc
Q 035631 310 EKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
|+++++++|+++++|++++..|+.
T Consensus 319 p~~~~~e~l~~~~~~~~~~~~~~~ 342 (361)
T 1kew_A 319 PLETFESGIRKTVEWYLANTQWVN 342 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHCHHHHH
T ss_pred CccCHHHHHHHHHHHHHhcccccc
Confidence 999999999999999998765543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=344.26 Aligned_cols=310 Identities=28% Similarity=0.406 Sum_probs=254.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc--ccccCCCCC---CCCCceEEEecCCCHHHHHHhhccC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSR---ASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
.+|+|||||||||||++|++.|+++ |++|++++|+.... ....+.... ...+++++.+|+.|.+.+.+++ .
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~ 101 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--A 101 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--T
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--c
Confidence 4689999999999999999999999 89999999964311 111110000 0247889999999999999998 6
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
++|+|||+|+......++.++...+++|+.++.+++++|++.+ +++|||+||.++|+..... +.+|+++..|.+.|
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~---~~~E~~~~~~~~~Y 177 (352)
T 1sb8_A 102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGL---PKVEDTIGKPLSPY 177 (352)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCS---SBCTTCCCCCCSHH
T ss_pred CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCC---CCCCCCCCCCCChh
Confidence 9999999999765433445778899999999999999999987 8999999999999876442 34677788899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
+.+|.++|.+++.++.+++++++++||++|||++..+. .+++.++..+..+.++.+++++++.++|+|++|+|+++
T Consensus 178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~ 257 (352)
T 1sb8_A 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 257 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 99999999999999888899999999999999976543 56778888888888888888999999999999999999
Q ss_pred HHHHhc--CCCCcEEEecCCCccCHHHHHHHHHHHh---CCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHH
Q 035631 242 DVILHR--GVIGHVYNVGTKKERSVLDVAADICTLF---KLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWE 315 (684)
Q Consensus 242 ~~~~~~--~~~~~~~ni~~~~~~t~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~ 315 (684)
+.++.. ...+++||+++++++|+.|+++.+.+.+ |.+......+.+..+.......+|++|+++ |||+|+++++
T Consensus 258 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 337 (352)
T 1sb8_A 258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVS 337 (352)
T ss_dssp HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHH
T ss_pred HHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHH
Confidence 998876 3467899999999999999999999999 876543222222223333456789999987 9999999999
Q ss_pred HHHHHHHHHHHhC
Q 035631 316 EGLKLTLEWYKKN 328 (684)
Q Consensus 316 e~i~~~i~~~~~~ 328 (684)
++|+++++||+++
T Consensus 338 e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 338 AGVALAMPWYIMF 350 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=338.56 Aligned_cols=300 Identities=31% Similarity=0.495 Sum_probs=249.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||++++++|+++ |++|++++|.... ....+ ..+++++.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATG-KRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSC-CGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcC-chhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999999 8999999985321 11111 1467889999999999998885448999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCc-ccccC-CCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTD-EVYGE-TDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~-~vyg~-~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
+|+......++.++...+++|+.++.+++++|++.+ +++||++||. ++||. ... .+.+|.++..|.+.|+.+|.
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~---~~~~E~~~~~~~~~Y~~sK~ 148 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEG---ERAEETWPPRPKSPYAASKA 148 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTT---CCBCTTSCCCCCSHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCC---CCcCCCCCCCCCChHHHHHH
Confidence 999765443446777899999999999999999887 8999999999 99986 322 23367777788899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCceEEe-----cCCCceEecccHHHHHHHHH
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP---EKLIPKFILLAMKGQQLPIH-----GNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~i~ 242 (684)
++|.+++.++++++++++++||+++|||+... ..+++.++..+..+.++.++ +++.+.++|+|++|+|+++.
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 228 (311)
T 2p5y_A 149 AFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHA 228 (311)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHH
Confidence 99999999988889999999999999997643 23577778877788888877 78888999999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTL 322 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i 322 (684)
.+++++ +++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++|||+|.++++++|++++
T Consensus 229 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~ 304 (311)
T 2p5y_A 229 LALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTV 304 (311)
T ss_dssp HHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHH
T ss_pred HHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHH
Confidence 999875 789999999999999999999999997654 3333333333345779999998899999999999999999
Q ss_pred HHHHhC
Q 035631 323 EWYKKN 328 (684)
Q Consensus 323 ~~~~~~ 328 (684)
+|++++
T Consensus 305 ~~~~~~ 310 (311)
T 2p5y_A 305 DHFRGA 310 (311)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 999764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=347.00 Aligned_cols=304 Identities=23% Similarity=0.281 Sum_probs=250.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHh--cCCCcEEEEEcCCCcccc-----cccCC--CCCCCCCceEEEecCCCHHHHH
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIK--NYPDYEIVALDKLDYCSS-----LKNLH--PSRASPNFKFLKGDITCADLMN 79 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~--~~~g~~V~~~~r~~~~~~-----~~~l~--~~~~~~~~~~~~~Dl~d~~~~~ 79 (684)
.+.+|+|||||||||||++|++.|++ + |++|++++|+..... ...+. ......+++++.+|+.|.+.+.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHP--KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCT--TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCC--CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence 34568999999999999999999999 6 899999999653110 00000 0112346799999999999998
Q ss_pred HhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 80 YLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 80 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
.+ ...++|+|||+|+.... +..++...+++|+.++.+++++|++.+ ++ |||+||.++||.... +.+|+++.
T Consensus 85 ~~-~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~----~~~E~~~~ 155 (362)
T 3sxp_A 85 RL-EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKA----PNVVGKNE 155 (362)
T ss_dssp HH-TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCS----SBCTTSCC
T ss_pred Hh-hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCC----CCCCCCCC
Confidence 88 22799999999996543 567888999999999999999999987 55 999999999997655 34778888
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.|.+.|+.+|.++|.+++.++.+ ++++++||+++|||+..+. .+++.++..+..+.++.+++++.+.++|+|++
T Consensus 156 ~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 233 (362)
T 3sxp_A 156 SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIE 233 (362)
T ss_dssp CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHH
Confidence 99999999999999999888654 8999999999999987543 67888999999999888888889999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CCCCcceecCHHHHHh-cCCcccCC
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PFNDHRYFLDDQKLKR-LGWKEKTP 313 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~-lg~~p~~~ 313 (684)
|+|++++.+++++..+ +||+++++++|+.|+++.+.+.+| +.+ +...+.. ........+|++|+++ |||+|+++
T Consensus 234 Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 309 (362)
T 3sxp_A 234 DVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DFK--VTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYD 309 (362)
T ss_dssp HHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CCE--EECCC-------CCCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CCc--eEECCCCCcCcccceecCHHHHHHHhCCCCCCC
Confidence 9999999999987666 999999999999999999999999 433 3333333 3334567899999976 99999999
Q ss_pred HHHHHHHHHHHHHhCC
Q 035631 314 WEEGLKLTLEWYKKNP 329 (684)
Q Consensus 314 ~~e~i~~~i~~~~~~~ 329 (684)
++++|+++++|++++.
T Consensus 310 l~e~l~~~~~~~~~~~ 325 (362)
T 3sxp_A 310 LESGIKDYLPHIHAIF 325 (362)
T ss_dssp HHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=345.66 Aligned_cols=297 Identities=30% Similarity=0.482 Sum_probs=249.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--cccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
+++|+|||||||||||++|++.|+++ |++|++++|+... .....+.......+++++.+|+. ++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------~~ 70 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------DV 70 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------TE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------cC
Confidence 35789999999999999999999999 8999999997531 01111111112245566666653 89
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+|+.......+.++...++ |+.++.+++++|++.+ +++|||+||.++||..... +.+|.++..|.+.|+.
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~---~~~E~~~~~p~~~Y~~ 145 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTL---PTPEDSPLSPRSPYAA 145 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSS---SBCTTSCCCCCSHHHH
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCC---CCCCCCCCCCCChhHH
Confidence 999999998765555566667777 9999999999999988 8999999999999987543 3477888889999999
Q ss_pred HHHHHHHHHHHHHHhcCC-CEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 168 TKAGAEMLVMAYHRSYGL-PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
+|.++|.+++.++.++++ +++++||+++||++.....+++.++..+..++++.++++++..++|+|++|+|++++.++.
T Consensus 146 sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~ 225 (321)
T 3vps_A 146 SKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN 225 (321)
T ss_dssp HHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh
Confidence 999999999999988899 9999999999999887777899999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcc-cCCHHHHHHHHHHH
Q 035631 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKE-KTPWEEGLKLTLEW 324 (684)
Q Consensus 247 ~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p-~~~~~e~i~~~i~~ 324 (684)
++..+ +||+++++.+|+.|+++.+. .+|.+.+ +...+..+.......+|++|+++ |||+| .++++++|+++++|
T Consensus 226 ~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~ 301 (321)
T 3vps_A 226 RPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAE--VARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEW 301 (321)
T ss_dssp SCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCE--EEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHH
T ss_pred cCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCc--cccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHH
Confidence 87776 99999999999999999999 9987654 33444444555677899999998 99999 88999999999999
Q ss_pred HHhCC
Q 035631 325 YKKNP 329 (684)
Q Consensus 325 ~~~~~ 329 (684)
++++.
T Consensus 302 ~~~~~ 306 (321)
T 3vps_A 302 WQSRD 306 (321)
T ss_dssp HHTSC
T ss_pred HHhCC
Confidence 99876
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=341.63 Aligned_cols=296 Identities=19% Similarity=0.295 Sum_probs=245.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|+|||||||||||++|++.|+++ |+ +.. . ....++.+.+|+.|.+.+.+++...++|+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~--~---------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADG--AG------LPG--E---------DWVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTT--C---------EEEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhc--CC------ccc--c---------cccccCceecccCCHHHHHHHHhhcCCCE
Confidence 56789999999999999999999999 55 111 0 01134445789999999999997667999
Q ss_pred EEEcCccCC-cCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC----CCCCCC-
Q 035631 90 IMHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS----QLLPTN- 163 (684)
Q Consensus 90 Vih~a~~~~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~- 163 (684)
|||+|+... ...+..++...+++|+.++.+|+++|++.+ +++|||+||.++||.....+ .+|++ +..|.+
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~---~~E~~~~~~~~~p~~~ 140 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYP---IDETMIHNGPPHNSNF 140 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSS---BCGGGGGBSCCCSSSH
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCC---ccccccccCCCCCCcc
Confidence 999999854 223557888899999999999999999987 89999999999999765433 35554 566666
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHH----HHcCCceEEecCCCceEecccHH
Q 035631 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILL----AMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.|+.+|.++|.+++.++++++++++++||+++|||+... ..+++.++.. +..++++.+++++++.++|+|++
T Consensus 141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (319)
T 4b8w_A 141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL 220 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence 599999999999999998889999999999999998643 2466666666 78889999999999999999999
Q ss_pred HHHHHHHHHHhcCC--CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccC
Q 035631 236 DVAEAFDVILHRGV--IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT 312 (684)
Q Consensus 236 D~a~~i~~~~~~~~--~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~ 312 (684)
|+|+++..+++++. .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++ |||.|.+
T Consensus 221 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 298 (319)
T 4b8w_A 221 DLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGE--VTFDTTKSDGQFKKTASNSKLRTYLPDFRFT 298 (319)
T ss_dssp HHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSC--EEEETTSCCCCSCCCBCCHHHHHHCTTCCCC
T ss_pred HHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCc--EEeCCCCCcCcccccCCHHHHHHhcCCCCCC
Confidence 99999999998743 4679999999999999999999999997654 34444444444556799999998 9999999
Q ss_pred CHHHHHHHHHHHHHhCCC
Q 035631 313 PWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 313 ~~~e~i~~~i~~~~~~~~ 330 (684)
+++++|+++++|++++.+
T Consensus 299 ~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 299 PFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp CHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=348.65 Aligned_cols=305 Identities=28% Similarity=0.478 Sum_probs=246.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+.+|+|||||||||||++|++.|+++ | ++|++++|+.... ...+. ...+++++.+|+.|.+.+.+++ .++|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~-~~~l~---~~~~v~~~~~Dl~d~~~l~~~~--~~~d 101 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAE-KINVP---DHPAVRFSETSITDDALLASLQ--DEYD 101 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCC-GGGSC---CCTTEEEECSCTTCHHHHHHCC--SCCS
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCc-hhhcc---CCCceEEEECCCCCHHHHHHHh--hCCC
Confidence 34589999999999999999999999 8 9999999975321 11121 1357899999999999999988 5999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCC--CCC---CC-CC
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNP--EAS---QL-LP 161 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~--e~~---~~-~p 161 (684)
+|||+|+......+..++...+++|+.++.+|+++|++. + +++|||+||.++||.....+ .+ |.+ +. .|
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~---~~~~E~~~~~~~~~~ 177 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDD---AKATEETDIVSLHNN 177 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC-----------------CCCCCCCSSCC
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCC---cCcccccccccccCC
Confidence 999999976544344577889999999999999999997 6 89999999999998754322 24 554 55 78
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC---------CC----CChHHHHHHHHHcCCceEEecCCCce
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ---------FP----EKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+.|+.+|.++|.+++.++.+++++++++||++|||++. .+ ..+++.++..+..+.++.+++++++.
T Consensus 178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~ 257 (377)
T 2q1s_A 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT 257 (377)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence 899999999999999999888899999999999999976 33 46788888888888888888888899
Q ss_pred EecccHHHHHHH-HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCc-ceecCHHHHHh-
Q 035631 229 RSYLYCADVAEA-FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH-RYFLDDQKLKR- 305 (684)
Q Consensus 229 ~~~i~~~D~a~~-i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~- 305 (684)
++|+|++|+|++ ++.+++++..+ +||+++++++|+.|+++.+.+.+|.+.+. ...+..+.... ...+|++|+++
T Consensus 258 ~~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~p~~~~~~~~~~~~d~~k~~~~ 334 (377)
T 2q1s_A 258 RDFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTEL--DRLPKRPWDNSGKRFGSPEKARRE 334 (377)
T ss_dssp ECCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCC--CCCCCCGGGCC-CCCCCCHHHHHH
T ss_pred EeeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCc--eeCCCCccccccccccCHHHHHHH
Confidence 999999999999 99999876655 99999999999999999999999976432 22222222223 56789999976
Q ss_pred cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 306 LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 306 lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
|||+|.++++++|+++++|++++.
T Consensus 335 lG~~p~~~l~e~l~~~~~~~~~~~ 358 (377)
T 2q1s_A 335 LGFSADVSIDDGLRKTIEWTKANL 358 (377)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHTH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=347.11 Aligned_cols=296 Identities=22% Similarity=0.282 Sum_probs=250.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
...+|+|||||||||||++|++.|+++ |++|++++|+... .+++++.+|+.|.+.+.+++ .++|
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~--~~~d 79 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI--MGVS 79 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH--TTCS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH--hCCC
Confidence 345689999999999999999999999 8999999996421 57889999999999999999 6999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+...... ......+++|+.++.+++++|++.+ +++|||+||.++||..... ..+.+|.++..|.+.|+.+
T Consensus 80 ~vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~-~~~~~E~~~~~~~~~Y~~s 155 (347)
T 4id9_A 80 AVLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPE-FLPVTEDHPLCPNSPYGLT 155 (347)
T ss_dssp EEEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCS-SSSBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCC-CCCcCCCCCCCCCChHHHH
Confidence 9999999765432 3347899999999999999999987 8999999999999973221 1345778888999999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCcee-------------CCCCCC-----------CChHHHHHHHHHcCCceEEecC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVY-------------GPNQFP-----------EKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~-------------G~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
|.++|.+++.++++++++++++||+++| ||+... ..++..++..+..+.++.++++
T Consensus 156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 235 (347)
T 4id9_A 156 KLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILAR 235 (347)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCC
Confidence 9999999999998889999999999999 876322 3677788888888888888888
Q ss_pred CCceEec----ccHHHHHHHHHHHHhcC-CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecC
Q 035631 225 GSNVRSY----LYCADVAEAFDVILHRG-VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLD 299 (684)
Q Consensus 225 ~~~~~~~----i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d 299 (684)
++..++| +|++|+|++++.++.++ ..+++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+ ....+|
T Consensus 236 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~---~~~~~d 310 (347)
T 4id9_A 236 NENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV--TVDFPGDG---VYYHTS 310 (347)
T ss_dssp CTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE--EEECSSCC---CBCCBC
T ss_pred CCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc--eeeCCCcc---cccccC
Confidence 8888999 99999999999999887 56889999999999999999999999997543 22222222 256799
Q ss_pred HHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 300 DQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 300 ~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
++|+++ |||+|+++++++|+++++|++++.
T Consensus 311 ~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 311 NERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 999988 999999999999999999998765
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=339.57 Aligned_cols=312 Identities=21% Similarity=0.267 Sum_probs=249.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+|||||||||||+++++.|+++ |++|++++|+........+.......+++++.+|+.|.+.+.+++...++|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 4689999999999999999999999 89999999975321111111111234688999999999999998855578999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV-KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
||+|+......++.++...+++|+.++.+++++|++.+ + ++|||+||.++||..... +.+|+++..|.+.|+.+|
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~---~~~E~~~~~p~~~Y~~sK 166 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAE---RQDENTPFYPRSPYGVAK 166 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSS---SBCTTSCCCCCSHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCC---CCCcccCCCCCChhHHHH
Confidence 99999766544567788999999999999999999986 5 899999999999876542 346778888999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCc-eEEecCCCceEecccHHHHHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEK---LIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
.++|.+++.++++++++++++||+.+|||+..... .+..++..+..+.. ...++++++.++|+|++|+|++++.++
T Consensus 167 ~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 246 (335)
T 1rpn_A 167 LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML 246 (335)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence 99999999998888999999999999999764332 24555666666653 345688889999999999999999999
Q ss_pred hcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHH
Q 035631 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTL 322 (684)
Q Consensus 246 ~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i 322 (684)
+++. +++||+++++++|+.|+++.+.+.+|.+....+.+.+ .++.......+|++|+++ |||+|+++++++|++++
T Consensus 247 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~ 325 (335)
T 1rpn_A 247 QQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMV 325 (335)
T ss_dssp HSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred hcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHH
Confidence 8765 4799999999999999999999999975322222221 123333456789999987 99999999999999999
Q ss_pred HHHHhCC
Q 035631 323 EWYKKNP 329 (684)
Q Consensus 323 ~~~~~~~ 329 (684)
+|++++.
T Consensus 326 ~~~~~~~ 332 (335)
T 1rpn_A 326 EADLRRV 332 (335)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998653
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=338.04 Aligned_cols=314 Identities=26% Similarity=0.384 Sum_probs=250.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--------cccccCCCCCCCCCceEEEecCCCHHHHHHhh
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHPSRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--------~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
|+|+|||||||||||++++++|+++ |++|++++|+... .....+.. ....+++++.+|+.|.+.+.+++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~ 77 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQE-LTGRSVEFEEMDILDQGALQRLF 77 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHH-HHTCCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHh-ccCCceEEEECCCCCHHHHHHHH
Confidence 4579999999999999999999999 8999999986421 00000000 01246889999999999999988
Q ss_pred ccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-
Q 035631 83 VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP- 161 (684)
Q Consensus 83 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p- 161 (684)
...++|+|||+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||..... +.+|+++..|
T Consensus 78 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~---~~~E~~~~~p~ 153 (348)
T 1ek6_A 78 KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYL---PLDEAHPTGGC 153 (348)
T ss_dssp HHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSS---SBCTTSCCCCC
T ss_pred HhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCC---CcCCCCCCCCC
Confidence 5448999999999765433445677899999999999999999987 8999999999999875432 3467777777
Q ss_pred CChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCC------C----CCChHHHHHHHHH-cCCceEEec------
Q 035631 162 TNPYSATKAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQ------F----PEKLIPKFILLAM-KGQQLPIHG------ 223 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------ 223 (684)
.+.|+.+|.++|.+++.++.+ .+++++++||+++||++. . ...+++.+...+. .+.++.+++
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (348)
T 1ek6_A 154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233 (348)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence 789999999999999998876 239999999999999842 1 2357777777776 667777776
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC--CCC-cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCH
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG--VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~--~~~-~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~ 300 (684)
++++.++|+|++|+|++++.+++++ ..+ ++||+++++++|+.|+++.+.+.+|.+.+ ....+..........+|+
T Consensus 234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~ 311 (348)
T 1ek6_A 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANP 311 (348)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCC
T ss_pred CCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCccchhhccCH
Confidence 6778899999999999999999764 344 79999999999999999999999997654 233333333344577999
Q ss_pred HHHHh-cCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 301 QKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 301 ~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+|+++ |||+|+++++++|+++++|++++...+.
T Consensus 312 ~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~~~~ 345 (348)
T 1ek6_A 312 SLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345 (348)
T ss_dssp HHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcccccc
Confidence 99987 9999999999999999999998875543
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=340.81 Aligned_cols=311 Identities=26% Similarity=0.417 Sum_probs=247.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc---cccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS---LKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
||+|||||||||||+++++.|+++ |++|++++|...... ...+. ...+++++.+|+.|.+.+.+++...++|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPD 75 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhc---cCCceEEEEcCCCCHHHHHHHHhccCCC
Confidence 368999999999999999999999 899999998532111 11111 1236889999999999999988434599
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEeCcccccCCCCCC-------------CCCCC
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-RFIHVSTDEVYGETDMES-------------DIGNP 154 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~i~~SS~~vyg~~~~~~-------------~~~~~ 154 (684)
+|||+|+......++.++...+++|+.++.+++++|++.+ ++ +|||+||.++||.....+ ..+.+
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~ 154 (347)
T 1orr_A 76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 154 (347)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcc
Confidence 9999999765433445778899999999999999999987 64 999999999998654321 01234
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCC-----ceEEecCCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP---EKLIPKFILLAMKGQ-----QLPIHGNGS 226 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~ 226 (684)
|..+..|.+.|+.+|.++|.+++.++.+++++++++||++|||++... ..+++.++..+..+. ++.++++++
T Consensus 155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 234 (347)
T 1orr_A 155 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK 234 (347)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence 566777888999999999999999988889999999999999997532 235666766665554 677788999
Q ss_pred ceEecccHHHHHHHHHHHHhc--CCCCcEEEecCCC--ccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHH
Q 035631 227 NVRSYLYCADVAEAFDVILHR--GVIGHVYNVGTKK--ERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQK 302 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~--~~~~~~~ni~~~~--~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k 302 (684)
+.++|+|++|+|++++.++++ ...+++||++++. ++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|
T Consensus 235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k 312 (347)
T 1orr_A 235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKK 312 (347)
T ss_dssp CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHH
T ss_pred ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCCCCcceeecCHHH
Confidence 999999999999999999975 2357799999886 49999999999999997654 23333333344556789999
Q ss_pred HHh-cCCcccCCHHHHHHHHHHHHHhCCC
Q 035631 303 LKR-LGWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 303 ~~~-lg~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
+++ |||+|+++++++|+++++|++++++
T Consensus 313 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 313 ITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp HHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred HHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 987 9999999999999999999998874
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=336.94 Aligned_cols=292 Identities=22% Similarity=0.367 Sum_probs=241.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+|||||||||||++|+++|+++ |++|++++|+. .+|+.|.+.+.+++...++|+|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~v 59 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQV 59 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCEE
Confidence 4579999999999999999999999 89999988742 3799999999998844489999
Q ss_pred EEcCccCCc-CCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC----CCCCC-Ch
Q 035631 91 MHFAAQTHV-DNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS----QLLPT-NP 164 (684)
Q Consensus 91 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~----~~~p~-~~ 164 (684)
||+|+.... ..+..++...+++|+.++.+++++|++.+ +++|||+||..+||.....+ .+|.+ +..|. +.
T Consensus 60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~---~~E~~~~~~~~~p~~~~ 135 (321)
T 1e6u_A 60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQP---MAESELLQGTLEPTNEP 135 (321)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSS---BCGGGTTSSCCCGGGHH
T ss_pred EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCC---cCccccccCCCCCCCCc
Confidence 999997542 12335677889999999999999999987 89999999999998754322 34554 45554 58
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHc----C-CceEEecCCCceEecccHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMK----G-QQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~ 235 (684)
|+.+|.++|.+++.++++++++++++||+++||++... ..+++.++..+.. + .++.++++++..++|+|++
T Consensus 136 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~ 215 (321)
T 1e6u_A 136 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD 215 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHH
Confidence 99999999999999988889999999999999997642 2577777777654 3 5777788899999999999
Q ss_pred HHHHHHHHHHhcCCC---------CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhc
Q 035631 236 DVAEAFDVILHRGVI---------GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306 (684)
Q Consensus 236 D~a~~i~~~~~~~~~---------~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l 306 (684)
|+|++++.+++++.. +++||+++++++|+.|+++.+.+.+|.+.+ +.+.+..+.......+|++|+++|
T Consensus 216 Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~l 293 (321)
T 1e6u_A 216 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPDGTPRKLLDVTRLHQL 293 (321)
T ss_dssp HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEETTSCCCCSBCCBCCHHHHHT
T ss_pred HHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCc--eEeCCCCCCCcccccCCHHHHHhc
Confidence 999999999987643 579999999999999999999999997653 333333344445678999999889
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCC
Q 035631 307 GWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
||+|+++++++|+++++|++++.+
T Consensus 294 G~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 294 GWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred CCccCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=329.03 Aligned_cols=280 Identities=23% Similarity=0.305 Sum_probs=239.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+|+|||||||||||+++++.|+++ |++|++++|. ++|+.|.+.+.+++...++|+|
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~~~d~v 60 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE--EYDIYPFDKK---------------------LLDITNISQVQQVVQEIRPHII 60 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTT---------------------TSCTTCHHHHHHHHHHHCCSEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC--CCEEEEeccc---------------------ccCCCCHHHHHHHHHhcCCCEE
Confidence 4469999999999999999999999 8999999983 3799999999999855589999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+......++.++...+++|+.++.+++++|++.+ + ||||+||.++||..... +.+|+++..|.+.|+.+|.
T Consensus 61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~---~~~E~~~~~p~~~Y~~sK~ 135 (287)
T 3sc6_A 61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPE---GYDEFHNPAPINIYGASKY 135 (287)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSS---CBCTTSCCCCCSHHHHHHH
T ss_pred EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCC---CCCCCCCCCCCCHHHHHHH
Confidence 99999887666667889999999999999999999988 4 79999999999876543 3478888899999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
++|.+++.++ .+++++||+++||++. ..+++.++..+..+.++.++++ +.++|+|++|+|+++..+++++.
T Consensus 136 ~~E~~~~~~~----~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~- 206 (287)
T 3sc6_A 136 AGEQFVKELH----NKYFIVRTSWLYGKYG--NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL- 206 (287)
T ss_dssp HHHHHHHHHC----SSEEEEEECSEECSSS--CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC-
T ss_pred HHHHHHHHhC----CCcEEEeeeeecCCCC--CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC-
Confidence 9999998763 4689999999999975 4688888888888888887754 78999999999999999999877
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec---cCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHh
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV---QDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
+++||+++++.+|+.|+++.+.+.+|.+........ +..........+|++|+++|||.|.++++++|+++++|+++
T Consensus 207 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 207 YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 789999999999999999999999998654221111 22223334567899999999999999999999999999865
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=332.71 Aligned_cols=304 Identities=23% Similarity=0.318 Sum_probs=249.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+||+|||||||||||++|+++|+++ |++|++++|+..... .....+++++.+|+.|.+.+..++ .++|+|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~V 97 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT--EGVDHV 97 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccch------hhccCCceEEECCCCCHHHHHHHh--CCCCEE
Confidence 4689999999999999999999999 899999999753211 011247899999999999999998 699999
Q ss_pred EEcCccCCcCCC-CCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC--CCCCCCCC--CCCCCChh
Q 035631 91 MHFAAQTHVDNS-FGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES--DIGNPEAS--QLLPTNPY 165 (684)
Q Consensus 91 ih~a~~~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~--~~~~~e~~--~~~p~~~Y 165 (684)
||+|+....... ..++...+++|+.++.+++++|++.+ +++|||+||.++|+...... ..+.+|++ +..|.+.|
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y 176 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence 999997643211 46788899999999999999999987 89999999999998643211 11124444 66788899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCc-eEEecCCCceEecccHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
+.+|.++|.+++.++.+++++++++||+++||++.... .++..++..+..+.+ +.+++++.+.++|+|++|+|++
T Consensus 177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence 99999999999999888899999999999999975431 367788888777766 7888888899999999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHH
Q 035631 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLK 319 (684)
Q Consensus 241 i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~ 319 (684)
++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+.+. ...+.. .......+|++|+++ |||+|+++++++|+
T Consensus 257 i~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~--~~~p~~-~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~ 332 (379)
T 2c5a_A 257 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI--HHIPGP-EGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 332 (379)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCE--EEECCC-CCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCce--eeCCCC-CCcccccCCHHHHHHHhCCCCCCCHHHHHH
Confidence 99999876 56799999999999999999999999976542 222221 123345789999987 99999999999999
Q ss_pred HHHHHHHhCC
Q 035631 320 LTLEWYKKNP 329 (684)
Q Consensus 320 ~~i~~~~~~~ 329 (684)
++++|++++.
T Consensus 333 ~~~~~~~~~~ 342 (379)
T 2c5a_A 333 ITYFWIKEQI 342 (379)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhH
Confidence 9999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=338.29 Aligned_cols=316 Identities=25% Similarity=0.386 Sum_probs=247.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHH-hcCCCcEEEEEcCCCcccc-------cccC-------CCCCCCCC---ceEEEecCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSS-------LKNL-------HPSRASPN---FKFLKGDIT 73 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~-~~~~g~~V~~~~r~~~~~~-------~~~l-------~~~~~~~~---~~~~~~Dl~ 73 (684)
+|+|||||||||||+++++.|+ ++ |++|++++|+..... ...+ .......+ ++++.+|+.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 3689999999999999999999 98 899999998643210 0111 00000124 889999999
Q ss_pred CHHHHHHhhccCC-CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC----C
Q 035631 74 CADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM----E 148 (684)
Q Consensus 74 d~~~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~----~ 148 (684)
|.+.+..++...+ +|+|||+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.... .
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~ 158 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVST 158 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccc
Confidence 9999998885446 999999999765433445677899999999999999999987 899999999999986541 0
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC---------CCChHHHHH----HHHHc
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF---------PEKLIPKFI----LLAMK 215 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~----~~~~~ 215 (684)
...+.+|+++..|.+.|+.+|.++|.+++.++.+++++++++||++|||++.. ...+++.++ ..+..
T Consensus 159 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 01234677788889999999999999999998888999999999999999631 245666655 13333
Q ss_pred CC------------ceEEec------CCCceEecccHHHHHHHHHHHHhcCC-C-----C---cEEEecCCCccCHHHHH
Q 035631 216 GQ------------QLPIHG------NGSNVRSYLYCADVAEAFDVILHRGV-I-----G---HVYNVGTKKERSVLDVA 268 (684)
Q Consensus 216 ~~------------~~~~~~------~~~~~~~~i~~~D~a~~i~~~~~~~~-~-----~---~~~ni~~~~~~t~~e~~ 268 (684)
+. ++.+++ ++++.++|+|++|+|++++.+++.+. . + ++||+++++++|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 32 466666 67889999999999999999997532 2 3 79999999999999999
Q ss_pred HHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccC-CHHHHHHHHHHHHHhCCCcc
Q 035631 269 ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT-PWEEGLKLTLEWYKKNPHWW 332 (684)
Q Consensus 269 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~-~~~e~i~~~i~~~~~~~~~~ 332 (684)
+.+.+.+|.+.+ +...+..........+|++|+++ |||+|++ +++++|+++++|++++.+.+
T Consensus 319 ~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~~~ 382 (397)
T 1gy8_A 319 EVARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGY 382 (397)
T ss_dssp HHHHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTT
T ss_pred HHHHHHhCCCCC--eeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccccc
Confidence 999999997654 33333333334567899999987 9999998 99999999999999887554
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=328.00 Aligned_cols=301 Identities=29% Similarity=0.490 Sum_probs=243.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+.+|+|||||||||||++|++.|+++ |++|++++|...... ..+.......+++++.+|+.+.. + .++|+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~d~ 94 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRK-RNVEHWIGHENFELINHDVVEPL-----Y--IEVDQ 94 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GGTGGGTTCTTEEEEECCTTSCC-----C--CCCSE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccch-hhhhhhccCCceEEEeCccCChh-----h--cCCCE
Confidence 45689999999999999999999999 899999999643211 11111112357899999998752 3 68999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC-----CCCCCCCh
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-----SQLLPTNP 164 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~ 164 (684)
|||+|+......+..++...+++|+.++.+++++|++.+ + +|||+||.++||.....+ .+|. .+..|.+.
T Consensus 95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~---~~E~~~~~~~~~~~~~~ 169 (343)
T 2b69_A 95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHP---QSEDYWGHVNPIGPRAC 169 (343)
T ss_dssp EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSS---BCTTCCCBCCSSSTTHH
T ss_pred EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCC---CcccccccCCCCCCCCc
Confidence 999999765443456788899999999999999999987 4 999999999998754322 2333 45667788
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
|+.+|.++|.+++.++++++++++++||+++||++... ..+++.++..+..++++.++++++..++|+|++|+|++++
T Consensus 170 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~ 249 (343)
T 2b69_A 170 YDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV 249 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHH
Confidence 99999999999999888889999999999999997543 3577888888888888888889999999999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT 321 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~ 321 (684)
.+++.+. +++||+++++++|+.|+++.+.+.+|.+.+ +...+..........+|++|+++ |||+|.++++++|+++
T Consensus 250 ~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 326 (343)
T 2b69_A 250 ALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKA 326 (343)
T ss_dssp HHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCC--ceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 9997654 679999999999999999999999997654 33333222333456789999987 9999999999999999
Q ss_pred HHHHHhC
Q 035631 322 LEWYKKN 328 (684)
Q Consensus 322 i~~~~~~ 328 (684)
++|++++
T Consensus 327 ~~~~~~~ 333 (343)
T 2b69_A 327 IHYFRKE 333 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=333.72 Aligned_cols=311 Identities=22% Similarity=0.353 Sum_probs=248.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+.+|+|||||||||||++|+++|+++ |++|++++|+.... ..+. ......+++++.+|+.|.+.+..++...++|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTV--PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPE 82 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSS--SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCccc--chhhHhhccCCceEEEEccccCHHHHHHHHHhcCCC
Confidence 35689999999999999999999999 89999999964221 1100 0011357899999999999999988544699
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+......+..++...+++|+.++.+++++|++.+.+++|||+||.++||..... .+.+|.++..|.+.|+.+
T Consensus 83 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~E~~~~~~~~~Y~~s 160 (357)
T 1rkx_A 83 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI--WGYRENEAMGGYDPYSNS 160 (357)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS--SCBCTTSCBCCSSHHHHH
T ss_pred EEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC--CCCCCCCCCCCCCccHHH
Confidence 999999965433344677789999999999999999987557899999999999875431 123566677888999999
Q ss_pred HHHHHHHHHHHHHhc---------CCCEEEEeeCceeCCCCCC-CChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 169 KAGAEMLVMAYHRSY---------GLPTITTRGNNVYGPNQFP-EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 169 K~~~E~~~~~~~~~~---------~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
|.++|.+++.++.++ +++++++||++|||++... ..+++.++..+..+.++.+ ++++..++|+|++|+|
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence 999999999987754 8999999999999997643 3678888888888887765 4567889999999999
Q ss_pred HHHHHHHhc-----CCCCcEEEecCC--CccCHHHHHHHHHHHhCCCCCcceeeccC-CCCCCcceecCHHHHHh-cCCc
Q 035631 239 EAFDVILHR-----GVIGHVYNVGTK--KERSVLDVAADICTLFKLEPEKTIHYVQD-RPFNDHRYFLDDQKLKR-LGWK 309 (684)
Q Consensus 239 ~~i~~~~~~-----~~~~~~~ni~~~--~~~t~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-lg~~ 309 (684)
++++.++.. ...+++||++++ +++|+.|+++.+.+.+|.+.+. ...+. .+.......+|++|+++ |||+
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 317 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW--QLDGNAHPHEAHYLKLDCSKAKMQLGWH 317 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE--EC-------CCCCCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcc--ccCCCCCCcCcccccCCHHHHHHHhCCC
Confidence 999998874 245789999984 6899999999999999976542 22211 12233456799999987 9999
Q ss_pred ccCCHHHHHHHHHHHHHhCC
Q 035631 310 EKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~ 329 (684)
|+++++++|+++++|++++.
T Consensus 318 p~~~l~e~l~~~~~~~~~~~ 337 (357)
T 1rkx_A 318 PRWNLNTTLEYIVGWHKNWL 337 (357)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999997653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=325.37 Aligned_cols=310 Identities=28% Similarity=0.454 Sum_probs=242.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+|||||||||||++++++|+++ |++|++++|...... ...+.. ....+++++.+|+.|.+.+.+++...++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHH-HHTSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHh-hcCCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence 58999999999999999999999 899999987532110 000000 0023578899999999999988865579999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChhHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYSATK 169 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~sK 169 (684)
||+||.........++...+++|+.++.+++++|++.+ +++||++||.++||..... +.+|..+..| .+.|+.+|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~---~~~e~~~~~~~~~~Y~~sK 153 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKI---PYVESFPTGTPQSPYGKSK 153 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSS---SBCTTSCCCCCSSHHHHHH
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCC---CcCcccCCCCCCChHHHHH
Confidence 99999765333345677889999999999999999887 8999999999999865432 2356556544 78999999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCC------C----CCChHHHHHHHHH-cCCceEEec------CCCceEec
Q 035631 170 AGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQ------F----PEKLIPKFILLAM-KGQQLPIHG------NGSNVRSY 231 (684)
Q Consensus 170 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~ 231 (684)
.++|.+++.++.++ +++++++||+++||+.. . ...+++.+..... .+.++.+++ ++++.++|
T Consensus 154 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 233 (338)
T 1udb_A 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeee
Confidence 99999999998776 79999999999999842 1 2346666666555 445566554 56788999
Q ss_pred ccHHHHHHHHHHHHhcC--CC-CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cC
Q 035631 232 LYCADVAEAFDVILHRG--VI-GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LG 307 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~--~~-~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg 307 (684)
+|++|+|++++.+++.. .. +++||+++++++|+.|+++.+.+.+|.+.+ ....+..+.......+|++|+++ ||
T Consensus 234 i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG 311 (338)
T 1udb_A 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHC
T ss_pred EEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc--ceeCCCCCCchhhhhcCHHHHHHHcC
Confidence 99999999999998753 23 379999999999999999999999997644 23333333333456789999977 99
Q ss_pred CcccCCHHHHHHHHHHHHHhCCCc
Q 035631 308 WKEKTPWEEGLKLTLEWYKKNPHW 331 (684)
Q Consensus 308 ~~p~~~~~e~i~~~i~~~~~~~~~ 331 (684)
|+|+++++++|+++++|++++.+.
T Consensus 312 ~~p~~~l~~~l~~~~~w~~~~~~~ 335 (338)
T 1udb_A 312 WRVTRTLDEMAQDTWHWQSRHPQG 335 (338)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred CCcCCCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999988654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=334.51 Aligned_cols=313 Identities=21% Similarity=0.283 Sum_probs=247.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc-----ccCCC------------CCCCCCceEEEecCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL-----KNLHP------------SRASPNFKFLKGDIT 73 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----~~l~~------------~~~~~~~~~~~~Dl~ 73 (684)
.+++|||||||||||+++++.|+++ |++|++++|....... ..+.. .....+++++.+|+.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 4579999999999999999999999 8999999885321100 00000 001246889999999
Q ss_pred CHHHHHHhhccCCCCEEEEcCccCCcCCCCCChH---HHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCcccccCCCCCC
Q 035631 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF---EFTNNNIYGTHVLLEACKLTGQV-KRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 74 d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~n~~~~~~ll~~~~~~~~~-~~~i~~SS~~vyg~~~~~~ 149 (684)
|.+.+.+++...++|+|||+||.........++. ..+++|+.++.+++++|++.+ + ++|||+||.++||.....
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~- 165 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNID- 165 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSC-
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCC-
Confidence 9999998885445999999999765433344544 477999999999999999887 5 699999999999875422
Q ss_pred CCCCCCC--------------CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-------------
Q 035631 150 DIGNPEA--------------SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP------------- 202 (684)
Q Consensus 150 ~~~~~e~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~------------- 202 (684)
.+|. .+..|.+.|+.+|.++|.+++.++.+++++++++||++||||+..+
T Consensus 166 ---~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~ 242 (404)
T 1i24_A 166 ---IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242 (404)
T ss_dssp ---BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred ---CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence 1232 3667889999999999999999988889999999999999997632
Q ss_pred ----CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-CC--cEEEecCCCccCHHHHHHHHHHH-
Q 035631 203 ----EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-IG--HVYNVGTKKERSVLDVAADICTL- 274 (684)
Q Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~--~~~ni~~~~~~t~~e~~~~i~~~- 274 (684)
..+++.++..+..++++.+++++.+.++|+|++|+|++++.+++++. .+ ++||+++ +++|+.|+++.+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~ 321 (404)
T 1i24_A 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAG 321 (404)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHH
Confidence 35788888888889888888999999999999999999999998765 35 6999998 889999999999998
Q ss_pred --hCCCCCcceeeccCCCC--CCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 275 --FKLEPEKTIHYVQDRPF--NDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 275 --~g~~~~~~~~~~~~~~~--~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+|.+.+ +...+.... ....+.+|++|+++|||+|+++++++++++++|++..++.+.
T Consensus 322 ~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~~~~~ 382 (404)
T 1i24_A 322 SKLGLDVK--KMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVD 382 (404)
T ss_dssp HTTTCCCC--EEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCC
T ss_pred HhhCCCcc--ccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhhhccC
Confidence 676543 222222111 223456899999889999999999999999999988775533
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=330.81 Aligned_cols=312 Identities=22% Similarity=0.242 Sum_probs=245.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc---cccCCCCC---CCCCceEEEecCCCHHHHHHhhcc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS---LKNLHPSR---ASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
|+|+|||||||||||+++++.|+++ |++|++++|+..... ...+.... ...+++++.+|+.|.+.+.+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE 100 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred cCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence 4478999999999999999999999 899999999753211 11111100 234688999999999999998855
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC---cEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV---KRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
.++|+|||+|+......++.++...+++|+.++.+++++|++.+ + ++|||+||.++|+..... +.+|+++..|
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~---~~~E~~~~~~ 176 (375)
T 1t2a_A 101 VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEI---PQKETTPFYP 176 (375)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSS---SBCTTSCCCC
T ss_pred cCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCC---CCCccCCCCC
Confidence 57899999999765443446777889999999999999999976 5 799999999999875432 3467778888
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHcCC-ceEEecCCCceEecccHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL---IPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~ 237 (684)
.+.|+.+|.++|.+++.++.+++++++++||+.+|||+.....+ +..++..+..+. ....++++++.++|+|++|+
T Consensus 177 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dv 256 (375)
T 1t2a_A 177 RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 256 (375)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHH
Confidence 89999999999999999988889999999999999997543322 344555555554 34456888899999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc-----------------eeecc--CCCCCCcceec
Q 035631 238 AEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT-----------------IHYVQ--DRPFNDHRYFL 298 (684)
Q Consensus 238 a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~ 298 (684)
|++++.+++++. +++||+++++++|+.|+++.+.+.+|.+.+.. ....+ .++.......+
T Consensus 257 a~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (375)
T 1t2a_A 257 VEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQG 335 (375)
T ss_dssp HHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCB
T ss_pred HHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcC
Confidence 999999998765 47999999999999999999999999753211 01111 12223344568
Q ss_pred CHHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 299 DDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 299 d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
|++|+++ |||+|+++++++|+++++|+++..
T Consensus 336 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 336 DCTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp CCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 9999987 999999999999999999998754
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=325.16 Aligned_cols=306 Identities=18% Similarity=0.219 Sum_probs=233.6
Q ss_pred CCCCCCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHH
Q 035631 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 1 m~~~~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
|.....+...++|+|||||||||||+++++.|+++ |++|++++|+... ...+. ..+++++.+|+.|.+.+.+
T Consensus 2 m~~~~~~~~~~~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~l~----~~~~~~~~~Dl~d~~~~~~ 73 (342)
T 2x4g_A 2 MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQ--IQRLA----YLEPECRVAEMLDHAGLER 73 (342)
T ss_dssp ----------CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSC--GGGGG----GGCCEEEECCTTCHHHHHH
T ss_pred CCCCcccccccCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHh--hhhhc----cCCeEEEEecCCCHHHHHH
Confidence 43333333445579999999999999999999999 8999999997531 11111 1378899999999999999
Q ss_pred hhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 81 LLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 81 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++ .++|+|||+|+... .+..++...+++|+.++.+++++|++.+ +++|||+||.++|+...... .. +|+++..
T Consensus 74 ~~--~~~d~vih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~-~~-~E~~~~~ 146 (342)
T 2x4g_A 74 AL--RGLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGL-PG-HEGLFYD 146 (342)
T ss_dssp HT--TTCSEEEEC--------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSS-CB-CTTCCCS
T ss_pred HH--cCCCEEEECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCC-CC-CCCCCCC
Confidence 98 68999999999754 2335667789999999999999999987 89999999999998765421 12 6777788
Q ss_pred C----CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC-CCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 161 P----TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ-FPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 161 p----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
| .+.|+.+|.++|.+++.++.. +++++++||+++||++. .+ . +..++..+..+....+ ++..++|+|++
T Consensus 147 p~~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~ 220 (342)
T 2x4g_A 147 SLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHY---VAGQRNVIDAA 220 (342)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEE---ECCEEEEEEHH
T ss_pred ccccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccc---cCCCcceeeHH
Confidence 8 889999999999999998877 99999999999999976 32 2 5566777777766554 56788999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec---------------cC---------CCC
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV---------------QD---------RPF 291 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~---------------~~---------~~~ 291 (684)
|+|++++.+++++..+++||+++++ +|+.|+++.+.+.+|.+.+..+... .. ...
T Consensus 221 Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (342)
T 2x4g_A 221 EAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEV 299 (342)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CC
T ss_pred HHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHH
Confidence 9999999999876668899999999 9999999999999998654211110 00 000
Q ss_pred CCcceecCHHHHHh-cCC-cccCCHHHHHHHHHHHHHhCC
Q 035631 292 NDHRYFLDDQKLKR-LGW-KEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 292 ~~~~~~~d~~k~~~-lg~-~p~~~~~e~i~~~i~~~~~~~ 329 (684)
......+|++|+++ ||| +| ++++++|+++++|+++++
T Consensus 300 ~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g 338 (342)
T 2x4g_A 300 MAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNG 338 (342)
T ss_dssp TTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTT
T ss_pred HhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcC
Confidence 12356789999988 999 99 899999999999999876
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=327.28 Aligned_cols=312 Identities=21% Similarity=0.255 Sum_probs=246.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.+|+|||||||||||+++++.|+++ |++|++++|+........+.......+++++.+|+.|.+.+.+++...++|+|
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 4579999999999999999999999 89999999975321111111111124688999999999999998855578999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV-KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
||+|+......+..++...+++|+.++.+++++|++.+ + ++|||+||.++||..... +.+|..+..|.+.|+.+|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~---~~~e~~~~~~~~~Y~~sK 155 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEI---PQTEKTPFYPRSPYAVAK 155 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSS---SBCTTSCCCCCSHHHHHH
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCC---CCCccCCCCCCChhHHHH
Confidence 99999876544567788999999999999999999876 5 899999999999976543 246777788889999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHcCCc-eEEecCCCceEecccHHHHHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL---IPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
.++|.+++.++.+++++++++|++++|||+...... +..++..+..+.. ...++++...++|+|++|+|++++.++
T Consensus 156 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~ 235 (345)
T 2z1m_A 156 LFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMM 235 (345)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHH
Confidence 999999999988889999999999999998644333 2334444555543 335677888899999999999999999
Q ss_pred hcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc-----------------eeecc--CCCCCCcceecCHHHHHh-
Q 035631 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT-----------------IHYVQ--DRPFNDHRYFLDDQKLKR- 305 (684)
Q Consensus 246 ~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~d~~k~~~- 305 (684)
+++. +++||+++++.+|+.|+++.+.+.+|.+.+.. ....+ ..+.......+|++|+++
T Consensus 236 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 314 (345)
T 2z1m_A 236 QQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKK 314 (345)
T ss_dssp TSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred hCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHH
Confidence 8765 47999999999999999999999999763211 01111 122233445679999987
Q ss_pred cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 306 LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 306 lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
|||+|+++++++|+++++|++++.
T Consensus 315 lG~~p~~~~~~~l~~~~~~~~~~~ 338 (345)
T 2z1m_A 315 LGWKPRTTFDELVEIMMEADLKRV 338 (345)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred cCCcccCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=328.18 Aligned_cols=299 Identities=21% Similarity=0.285 Sum_probs=243.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC---C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---G 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~ 86 (684)
.+|+|||||||||||++|++.|+++ | ++|++++|+........+. ++. +.+|+.|.+.+..++... +
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGGGGGTT------TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcchhhccc------Cce-EeeecCcHHHHHHHHhhcccCC
Confidence 3478999999999999999999999 7 8999999975332122221 233 678999999888887421 6
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
+|+|||+|+.... ...++...+++|+.++.+++++|++.+ + +|||+||.++||..... +.+|+++..|.+.|+
T Consensus 116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~---~~~E~~~~~p~~~Y~ 188 (357)
T 2x6t_A 116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSD---FIESREYEKPLNVFG 188 (357)
T ss_dssp CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSC---CCSSGGGCCCSSHHH
T ss_pred CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCC---CcCCcCCCCCCChhH
Confidence 9999999997654 456788899999999999999999987 6 99999999999876432 346777888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEEecCCCc-eEecccHHHHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSN-VRSYLYCADVAEAF 241 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i 241 (684)
.+|.++|.+++.++.+++++++++||++|||++... ..++..++..+..+.++.+++++.. .++|+|++|+|+++
T Consensus 189 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai 268 (357)
T 2x6t_A 189 YSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 268 (357)
T ss_dssp HHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHH
Confidence 999999999999988889999999999999997642 3577888888888888888888888 89999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC--CCCCCcceecCHHHHHhcCC-cccCCHHHHH
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQKLKRLGW-KEKTPWEEGL 318 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~-~p~~~~~e~i 318 (684)
+.+++++. +++||+++++.+|+.|+++.+.+.+|.+ .......+. .........+|++|+++||| .|.++++++|
T Consensus 269 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l 346 (357)
T 2x6t_A 269 LWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGV 346 (357)
T ss_dssp HHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHH
T ss_pred HHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHHH
Confidence 99998776 8899999999999999999999999976 211111111 01112345689999999999 7889999999
Q ss_pred HHHHHHHHh
Q 035631 319 KLTLEWYKK 327 (684)
Q Consensus 319 ~~~i~~~~~ 327 (684)
+++++|+++
T Consensus 347 ~~~~~~~~~ 355 (357)
T 2x6t_A 347 TEYMAWLNR 355 (357)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhh
Confidence 999999965
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=327.65 Aligned_cols=304 Identities=24% Similarity=0.361 Sum_probs=240.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCC-HHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC-ADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~Vi 91 (684)
|+|||||||||||++++++|++++ |++|++++|+... ...+ ....+++++.+|+.| .+.+..++ .++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~--~~~~---~~~~~~~~~~~D~~~~~~~~~~~~--~~~d~vi 72 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDA--ISRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCDVVL 72 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGG--GGGG---TTCTTEEEEECCTTTCSHHHHHHH--HHCSEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeCCcch--HHHh---hcCCCeEEEeccccCcHHHHHhhc--cCCCEEE
Confidence 589999999999999999999973 6899999997531 2111 123578999999998 45677777 5899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC-------CCCCh
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL-------LPTNP 164 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~-------~p~~~ 164 (684)
|+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++||...... .+|.++. .|.+.
T Consensus 73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~---~~e~~~~~~~~~~~~~~~~ 147 (345)
T 2bll_A 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKY---FDEDHSNLIVGPVNKPRWI 147 (345)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSS---BCTTTCCCBCCCTTCGGGH
T ss_pred EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCC---cCCcccccccCcccCcccc
Confidence 9999765433335677889999999999999999976 8999999999998754322 2343322 34568
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--------EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
|+.+|.++|.+++.++++++++++++||+++||++... ..++..++..+..+.++.+++++++.++|+|++|
T Consensus 148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence 99999999999999988889999999999999997632 2367788888888888888888889999999999
Q ss_pred HHHHHHHHHhcC---CCCcEEEecCCC-ccCHHHHHHHHHHHhCCCCCcc-eeec------cC------CCCCCcceecC
Q 035631 237 VAEAFDVILHRG---VIGHVYNVGTKK-ERSVLDVAADICTLFKLEPEKT-IHYV------QD------RPFNDHRYFLD 299 (684)
Q Consensus 237 ~a~~i~~~~~~~---~~~~~~ni~~~~-~~t~~e~~~~i~~~~g~~~~~~-~~~~------~~------~~~~~~~~~~d 299 (684)
+|++++.+++++ ..+++||+++++ .+|+.|+++.+.+.+|...... +... .. .........+|
T Consensus 228 va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (345)
T 2bll_A 228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 307 (345)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence 999999999865 357899999986 8999999999999998654311 1000 00 00112345689
Q ss_pred HHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 300 DQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 300 ~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
++|+++ |||+|+++++++|+++++|++++.
T Consensus 308 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 338 (345)
T 2bll_A 308 IRNAHRCLDWEPKIDMQETIDETLDFFLRTV 338 (345)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence 999987 999999999999999999998765
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=327.45 Aligned_cols=311 Identities=22% Similarity=0.273 Sum_probs=244.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCC-----CCCCceEEEecCCCHHHHHHhhccCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-----ASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
||+|||||||||||++++++|+++ |++|++++|+........+.... ...+++++.+|+.|.+.+.+++...+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 478999999999999999999999 89999999975321111111111 12468889999999999999885557
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC---cEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV---KRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
+|+|||+|+......+..++...+++|+.++.+++++|++.+ + ++||++||.++||..... +.+|+++..|.+
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~---~~~E~~~~~~~~ 154 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEI---PQKETTPFYPRS 154 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSS---SBCTTSCCCCCS
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCC---CCCccCCCCCCC
Confidence 899999999876656667888899999999999999999976 6 799999999999876432 346777888899
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCc-eEEecCCCceEecccHHHHHH
Q 035631 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEK---LIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~ 239 (684)
.|+.+|.++|.+++.++.+++++++++|++.+|||+..... .+..++..+..+.. ...++++++.++|+|++|+|+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 234 (372)
T 1db3_A 155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence 99999999999999998888999999999999999764332 24455556666653 445688889999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc---------------------------eeecc--CCC
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT---------------------------IHYVQ--DRP 290 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~---------------------------~~~~~--~~~ 290 (684)
+++.+++++. +++||+++++++|+.|+++.+.+.+|.+.+.. ....+ .++
T Consensus 235 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1db3_A 235 MQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313 (372)
T ss_dssp HHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred HHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCC
Confidence 9999998755 47999999999999999999999998643210 00011 122
Q ss_pred CCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCC
Q 035631 291 FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 291 ~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
.......+|++|+++ |||+|+++++++|+++++|++++.
T Consensus 314 ~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 353 (372)
T 1db3_A 314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 353 (372)
T ss_dssp CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence 223345689999987 999999999999999999997654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=328.47 Aligned_cols=311 Identities=23% Similarity=0.258 Sum_probs=246.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCC-----CC-CceEEEecCCCHHHHHHhhcc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA-----SP-NFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~-----~~-~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
|+|+|||||||||||++|++.|+++ |++|++++|+........+..... .. +++++.+|+.|.+.+.+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 104 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV 104 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHh
Confidence 3479999999999999999999999 899999999753211111111110 12 788999999999999998855
Q ss_pred CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-----EEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-----RFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-----~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
.++|+|||+|+......++.++...+++|+.++.+++++|++.+ ++ +|||+||.++||.... +.+|+++.
T Consensus 105 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~----~~~E~~~~ 179 (381)
T 1n7h_A 105 IKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPP----PQSETTPF 179 (381)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCS----SBCTTSCC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCC----CCCCCCCC
Confidence 57899999999766443446778899999999999999999876 55 9999999999997654 34677788
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCc-eEEecCCCceEecccHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEK---LIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~ 235 (684)
.|.+.|+.+|.++|.+++.++.+++++++++|++++|||+..... .+..++..+..+.. ...+++++..++|+|++
T Consensus 180 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~ 259 (381)
T 1n7h_A 180 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG 259 (381)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHH
Confidence 889999999999999999998888999999999999999764332 23444555555543 34467888999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccC
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKT 312 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~ 312 (684)
|+|++++.+++++. +++||+++++.+|+.|+++.+.+.+|.+....+.+.+ .++.......+|++|+++ |||+|++
T Consensus 260 Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 338 (381)
T 1n7h_A 260 DYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQV 338 (381)
T ss_dssp HHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred HHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccC
Confidence 99999999998765 4799999999999999999999999975321222221 122333456789999988 9999999
Q ss_pred CHHHHHHHHHHHHHhCC
Q 035631 313 PWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 313 ~~~e~i~~~i~~~~~~~ 329 (684)
+++++|+++++|++++.
T Consensus 339 ~l~e~l~~~~~~~~~~~ 355 (381)
T 1n7h_A 339 GFEKLVKMMVDEDLELA 355 (381)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhc
Confidence 99999999999998765
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=326.88 Aligned_cols=299 Identities=21% Similarity=0.221 Sum_probs=236.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+|+|||||||||||++++++|+++..|++|++++|+..... + .++++++.+|+.|.+.+.+++...++|+|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~v 72 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD---V-----VNSGPFEVVNALDFNQIEHLVEVHKITDI 72 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH---H-----HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc---c-----cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence 357899999999999999999998722689999999653211 0 13578899999999999999855589999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+..... ...++...+++|+.++.+++++|++.+ +++|||+||.++|+..... ...+|+.+..|.+.|+.+|.
T Consensus 73 ih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~~~~~Y~~sK~ 148 (312)
T 2yy7_A 73 YLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPK--ENTPQYTIMEPSTVYGISKQ 148 (312)
T ss_dssp EECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCS--SSBCSSCBCCCCSHHHHHHH
T ss_pred EECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCC--CCccccCcCCCCchhHHHHH
Confidence 9999975431 235677889999999999999999987 8999999999999875421 22356777888999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----C-hHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHH
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----K-LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
++|.+++.++.+++++++++||+++||+...+. . +...+... ..++++..++++++.++|+|++|+|++++.++
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 227 (312)
T 2yy7_A 149 AGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKA-IADKKYECFLSSETKMPMMYMDDAIDATINIM 227 (312)
T ss_dssp HHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHH-HHTSEEEESSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHH-HcCCCeEEecCCCceeeeeeHHHHHHHHHHHH
Confidence 999999999888899999999999999764322 2 33444433 44555677788888999999999999999999
Q ss_pred hcCCC----CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCC---CCCcceecCHHHHHh-cCCcccCCHHHH
Q 035631 246 HRGVI----GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRP---FNDHRYFLDDQKLKR-LGWKEKTPWEEG 317 (684)
Q Consensus 246 ~~~~~----~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~d~~k~~~-lg~~p~~~~~e~ 317 (684)
+++.. +++||+++ +.+|+.|+++.+.+.+|. . .+.+.+... .......+|++|+++ |||+|+++++++
T Consensus 228 ~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~--~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 303 (312)
T 2yy7_A 228 KAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-F--TITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESM 303 (312)
T ss_dssp HSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-C--EEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHH
T ss_pred hCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-C--ceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHH
Confidence 87542 47999996 889999999999999883 1 233322110 011234689999988 999999999999
Q ss_pred HHHHHHHHH
Q 035631 318 LKLTLEWYK 326 (684)
Q Consensus 318 i~~~i~~~~ 326 (684)
|+++++|++
T Consensus 304 l~~~~~~~k 312 (312)
T 2yy7_A 304 TKDMIEHLS 312 (312)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999984
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=322.14 Aligned_cols=297 Identities=22% Similarity=0.284 Sum_probs=223.7
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---CCCCE
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---EGIDT 89 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~ 89 (684)
+|||||||||||++++++|+++ | ++|++++|.........+. +++ +.+|+.|.+.+..++.. .++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHHHHHhccccCCCcE
Confidence 5999999999999999999999 7 8999999975322111111 223 67899999988888742 15999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|||+|+.... +..++...+++|+.++.+++++|++.+ + +|||+||.++||..... +.+|+++..|.+.|+.+|
T Consensus 72 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~---~~~E~~~~~p~~~Y~~sK 144 (310)
T 1eq2_A 72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSD---FIESREYEKPLNVYGYSK 144 (310)
T ss_dssp EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSC---BCSSGGGCCCSSHHHHHH
T ss_pred EEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCC---CCCCCCCCCCCChhHHHH
Confidence 9999997654 456788899999999999999999987 6 99999999999876532 246777888899999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEEecCCCc-eEecccHHHHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSN-VRSYLYCADVAEAFDVI 244 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i~~~ 244 (684)
.++|.+++.++++++++++++||+++||++... ..+++.++..+..++++.+++++.. .++|+|++|+|++++.+
T Consensus 145 ~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~ 224 (310)
T 1eq2_A 145 FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 224 (310)
T ss_dssp HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHH
Confidence 999999999988889999999999999997642 3678888888888888877788888 89999999999999999
Q ss_pred HhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccC--CCCCCcceecCHHHHHhcCC-cccCCHHHHHHHH
Q 035631 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQKLKRLGW-KEKTPWEEGLKLT 321 (684)
Q Consensus 245 ~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~-~p~~~~~e~i~~~ 321 (684)
++++. +++||+++++++|+.|+++.+.+.+|.+ .......+. .........+|++|+++||| .|.++++++|+++
T Consensus 225 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~ 302 (310)
T 1eq2_A 225 LENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEY 302 (310)
T ss_dssp HHHCC-CEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHH
T ss_pred HhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHH
Confidence 98776 8899999999999999999999999875 111111111 01112335689999999999 7889999999999
Q ss_pred HHHHHhC
Q 035631 322 LEWYKKN 328 (684)
Q Consensus 322 i~~~~~~ 328 (684)
++|++++
T Consensus 303 ~~~~~~~ 309 (310)
T 1eq2_A 303 MAWLNRD 309 (310)
T ss_dssp HHHTC--
T ss_pred HHHHHhc
Confidence 9998653
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=319.23 Aligned_cols=276 Identities=17% Similarity=0.180 Sum_probs=223.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+||||| +||||++|++.|+++ |++|++++|+... ...+++++.+|+.|.+.+..++. .++|+|
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~v 67 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH-LRPEIL 67 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG-GCCSEE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc-CCCCEE
Confidence 457899999 599999999999999 8999999997521 23678999999999999888874 249999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+... .++...+++|+.++.+++++|++.+ +++|||+||.++||.....+ .+|+++..|.+.|+.+|.
T Consensus 68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y~~sK~ 138 (286)
T 3gpi_A 68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEW---LDEDTPPIAKDFSGKRML 138 (286)
T ss_dssp EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSE---ECTTSCCCCCSHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCC---CCCCCCCCCCChhhHHHH
Confidence 99999642 3456778899999999999999876 89999999999999765433 367888889999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc---
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR--- 247 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~--- 247 (684)
++|.+ +.+ ++++++||+++||++.. .++..+.. .. .+++++..++|+|++|+|+++..++++
T Consensus 139 ~~E~~-~~~-----~~~~ilR~~~v~G~~~~------~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 203 (286)
T 3gpi_A 139 EAEAL-LAA-----YSSTILRFSGIYGPGRL------RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSH 203 (286)
T ss_dssp HHHHH-GGG-----SSEEEEEECEEEBTTBC------HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred HHHHH-Hhc-----CCeEEEecccccCCCch------hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhcc
Confidence 99998 553 89999999999999763 23333333 22 236778889999999999999999987
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccC-CHHHHHHHHHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKT-PWEEGLKLTLEWYK 326 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~-~~~e~i~~~i~~~~ 326 (684)
...+++||+++++++|+.|+++.+.+.+|.+.+.... + .......+|++|+++|||+|++ +++++|+++++|+.
T Consensus 204 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~---~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~ 278 (286)
T 3gpi_A 204 AVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT--P---PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMR 278 (286)
T ss_dssp SCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC--C---CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHT
T ss_pred CCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC--c---ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHh
Confidence 5678999999999999999999999999986543211 1 2334567999999999999998 69999999999997
Q ss_pred hCC
Q 035631 327 KNP 329 (684)
Q Consensus 327 ~~~ 329 (684)
+..
T Consensus 279 ~~~ 281 (286)
T 3gpi_A 279 EGH 281 (286)
T ss_dssp C--
T ss_pred ccc
Confidence 654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=315.46 Aligned_cols=283 Identities=20% Similarity=0.169 Sum_probs=234.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||+++++.|+ + |++|++++|+. +.+.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~-----------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHS-----------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTC-----------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEecccc-----------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 589999999999999999999 8 89999999953 124689999999999885446999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+......+..++...+++|+.++.+++++|++.+ + ||||+||.++||..... +.+|+++..|.+.|+.+|.++
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~---~~~E~~~~~p~~~Y~~sK~~~ 135 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDI---PWQETDATSPLNVYGKTKLAG 135 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTC---CBCTTSCCCCSSHHHHHHHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCC---CCCCCCCCCCccHHHHHHHHH
Confidence 999766544567888999999999999999999987 5 89999999999976532 346777888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC--C-
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--V- 249 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~- 249 (684)
|.+++.++ .+++++||+++||++.. ++++.++..+..+.++.+.++ +.++|+|++|+|+++..+++++ .
T Consensus 136 E~~~~~~~----~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~ 207 (299)
T 1n2s_A 136 EKALQDNC----PKHLIFRTSWVYAGKGN--NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSSC--CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHhC----CCeEEEeeeeecCCCcC--cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhcccc
Confidence 99998763 48999999999999763 678888888888887777654 7899999999999999999865 3
Q ss_pred -CCcEEEecCCCccCHHHHHHHHHHHhCCCCC----cceeeccC-----CCCCCcceecCHHHHHh-cCCcccCCHHHHH
Q 035631 250 -IGHVYNVGTKKERSVLDVAADICTLFKLEPE----KTIHYVQD-----RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGL 318 (684)
Q Consensus 250 -~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~----~~~~~~~~-----~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i 318 (684)
.+++||+++++.+|+.|+++.+.+.+|.+.+ ..+...+. .........+|++|+++ |||+|+ +++++|
T Consensus 208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l 286 (299)
T 1n2s_A 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (299)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred ccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHH
Confidence 3789999999999999999999999986521 11222211 11123456799999988 999998 899999
Q ss_pred HHHHHHHHhCC
Q 035631 319 KLTLEWYKKNP 329 (684)
Q Consensus 319 ~~~i~~~~~~~ 329 (684)
+++++|++++.
T Consensus 287 ~~~~~~~~~~~ 297 (299)
T 1n2s_A 287 KRMLTEMFTTT 297 (299)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHhcC
Confidence 99999998754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=316.19 Aligned_cols=297 Identities=23% Similarity=0.295 Sum_probs=234.5
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
+..+.+|+|||||||||||+++++.|+++ |++|++++|+..... ..+.. ..+++++.+|+.|.+.+.+++...+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~---l~~v~~~~~Dl~d~~~~~~~~~~~~ 88 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKR-EVLPP---VAGLSVIEGSVTDAGLLERAFDSFK 88 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCG-GGSCS---CTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccch-hhhhc---cCCceEEEeeCCCHHHHHHHHhhcC
Confidence 34455689999999999999999999999 899999999642211 00111 1578999999999999999884338
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
+|+|||+|+..... +..++. +++|+.++.+++++|.+.+ +++|||+||.++|+...... .+.+|++ .|.+.|+
T Consensus 89 ~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~-~~~~E~~--~~~~~Y~ 161 (330)
T 2pzm_A 89 PTHVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVP-IPIDSPT--APFTSYG 161 (330)
T ss_dssp CSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSS-BCTTCCC--CCCSHHH
T ss_pred CCEEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCC-CCcCCCC--CCCChHH
Confidence 99999999976543 223333 8999999999999999887 89999999999998653320 0234444 6778999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH-HHHHHH
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE-AFDVIL 245 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~i~~~~ 245 (684)
.+|.++|.+++.+ +++++++||+++|||+. ...++..++..+..+. ..++++. .++++|++|+|+ +++.++
T Consensus 162 ~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~ 233 (330)
T 2pzm_A 162 ISKTAGEAFLMMS----DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQ 233 (330)
T ss_dssp HHHHHHHHHHHTC----SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHc----CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHh
Confidence 9999999998765 89999999999999986 3467777777776665 4445666 889999999999 999999
Q ss_pred hcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHH-----HhcCCcccCCHHHHHHH
Q 035631 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-----KRLGWKEKTPWEEGLKL 320 (684)
Q Consensus 246 ~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lg~~p~~~~~e~i~~ 320 (684)
.++. +++||+++++++|+.|+++.+.+.+|.+ + +.+.+..+ ......+|++|+ ++|||+|+++++++|++
T Consensus 234 ~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~--~~~~~~~~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~ 308 (330)
T 2pzm_A 234 EGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT-L--AEPVPVVA-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITG 308 (330)
T ss_dssp TTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-C--SSCCCEEC-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred hcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC-C--ceeCCCCc-chhhccCCHHHHhhchHHHcCCcccCCHHHHHHH
Confidence 8766 8899999999999999999999999976 2 11111111 233456777777 78999999999999999
Q ss_pred HHHHHHhCC
Q 035631 321 TLEWYKKNP 329 (684)
Q Consensus 321 ~i~~~~~~~ 329 (684)
+++|+++++
T Consensus 309 ~~~~~~~~~ 317 (330)
T 2pzm_A 309 QLAWYDKYG 317 (330)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998765
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=311.72 Aligned_cols=294 Identities=21% Similarity=0.270 Sum_probs=231.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.+.+|+|||||||||||+++++.|+++ |++|++++|+... ....+.. ..+++++.+|+.|.+.+.+++...++|
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~-~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D 91 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATG-RREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPD 91 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSC-CGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCcc-chhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCc
Confidence 345689999999999999999999999 8999999997421 1111211 157899999999999999988444599
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccccc----CCCCCCCCCCCCCCCCCCC-C
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYG----ETDMESDIGNPEASQLLPT-N 163 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg----~~~~~~~~~~~e~~~~~p~-~ 163 (684)
+|||+|+..... +..++. +++|+.++.+++++|++.+ +++|||+||.++|| .... +.+|.+ .|. +
T Consensus 92 ~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~----~~~E~~--~p~~~ 161 (333)
T 2q1w_A 92 AVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV----RLDHPR--NPANS 161 (333)
T ss_dssp EEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB----CTTSCC--CCTTC
T ss_pred EEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC----CcCCCC--CCCCC
Confidence 999999976543 223333 8999999999999999987 89999999999998 4332 234544 666 8
Q ss_pred hhHHHHHHHHHHHHH-HHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 164 PYSATKAGAEMLVMA-YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~-~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
.|+.+|.++|.+++. ++ +++++||+++|||+. ...+++.++..+..+. .+++ +...++++|++|+|++++
T Consensus 162 ~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~ 232 (333)
T 2q1w_A 162 SYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN-VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATV 232 (333)
T ss_dssp HHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC-CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC-cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHH
Confidence 999999999999977 53 799999999999983 2467788877777665 3445 567889999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcce-eeccC-CCCCCcceecCHHHHHhcCCcccCCHHHHHHH
Q 035631 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTI-HYVQD-RPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKL 320 (684)
Q Consensus 243 ~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~-~~~~~-~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~ 320 (684)
.++.++. +++||+++++.+|+.|+++.+.+.+|.+ .... ...+. .........+|++|++++||+|.++++++|++
T Consensus 233 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~ 310 (333)
T 2q1w_A 233 RAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAA 310 (333)
T ss_dssp HHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred HHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHH
Confidence 9998766 8899999999999999999999999976 2111 11111 11112456789999988899999999999999
Q ss_pred HHHHHHhCC
Q 035631 321 TLEWYKKNP 329 (684)
Q Consensus 321 ~i~~~~~~~ 329 (684)
+++|+++++
T Consensus 311 ~~~~~~~~~ 319 (333)
T 2q1w_A 311 AVAYFREYG 319 (333)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
Confidence 999998776
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=315.95 Aligned_cols=295 Identities=20% Similarity=0.230 Sum_probs=207.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+|+|||||||||||++++++|+++ |++|++++|+... ++ ++.+|+.|.+.+.+++...++|+|
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~------------~~--~~~~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR------------PK--FEQVNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC--------------------------------CHHHHHHHCCSEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC------------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence 3579999999999999999999999 8999999986421 12 678999999988888854469999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+|+......+..++...+++|+.++.+++++|++.+ + +|||+||.++|+... .+.+|+++..|.+.|+.+|.
T Consensus 65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~----~~~~E~~~~~~~~~Y~~sK~ 138 (315)
T 2ydy_A 65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTN----PPYREEDIPAPLNLYGKTKL 138 (315)
T ss_dssp EECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSS----CSBCTTSCCCCCSHHHHHHH
T ss_pred EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCC----CCCCCCCCCCCcCHHHHHHH
Confidence 99999866554556778899999999999999999987 4 999999999998732 23467778888999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-CChHHHHHHHHH-cCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP-EKLIPKFILLAM-KGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
++|.+++.+ +++++++||+.|||+...+ ..++..++..+. .+.++.+. ++..++++|++|+|++++.++.++
T Consensus 139 ~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~ 212 (315)
T 2ydy_A 139 DGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKR 212 (315)
T ss_dssp HHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhh
Confidence 999999776 5778999999999997642 145556666666 66666654 357789999999999999998753
Q ss_pred ----CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec--cC-CCCCCcceecCHHHHHhcCCcccCCHHHHHHHH
Q 035631 249 ----VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV--QD-RPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLT 321 (684)
Q Consensus 249 ----~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~--~~-~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~ 321 (684)
..+++||+++++++|+.|+++.+.+.+|.+.+...... +. .........+|++|++++||+|.++++++|+++
T Consensus 213 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~ 292 (315)
T 2ydy_A 213 MLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKES 292 (315)
T ss_dssp HTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHH
T ss_pred ccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHH
Confidence 56789999999999999999999999998654211111 11 112234567899999888999999999999999
Q ss_pred HHHHHhCCCccc
Q 035631 322 LEWYKKNPHWWG 333 (684)
Q Consensus 322 i~~~~~~~~~~~ 333 (684)
++|++++++|+.
T Consensus 293 ~~~~~~~~~~~~ 304 (315)
T 2ydy_A 293 LWPFLIDKRWRQ 304 (315)
T ss_dssp HGGGCC------
T ss_pred HHHHccchhhhh
Confidence 999988876554
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=308.10 Aligned_cols=277 Identities=22% Similarity=0.240 Sum_probs=230.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.++|||||||||||+++++.|+++ |++|++++|+ .+|+.|.+.+.+++...++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQ---------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCc---------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 378999999999999999999999 8999999984 37999999999888434899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+......+..++...+++|+.++.+++++|++.+ + +|||+||.++|+..... +.+|+++..|.+.|+.+|.+
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~---~~~E~~~~~~~~~Y~~sK~~ 143 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKE---PITEFDEVNPQSAYGKTKLE 143 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSS---CBCTTSCCCCCSHHHHHHHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCC---CCCCCCCCCCccHHHHHHHH
Confidence 9999765433446778899999999999999999987 6 99999999999876432 34677788889999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCC
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 251 (684)
+|.+++.+ ..+++++||+.+||+ . ..++..++..+..+.++.+.+ +..++++|++|+|++++.+++++ .+
T Consensus 144 ~E~~~~~~----~~~~~~lR~~~v~G~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~~ 213 (292)
T 1vl0_A 144 GENFVKAL----NPKYYIVRTAWLYGD-G--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-NY 213 (292)
T ss_dssp HHHHHHHH----CSSEEEEEECSEESS-S--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-CC
T ss_pred HHHHHHhh----CCCeEEEeeeeeeCC-C--cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-CC
Confidence 99999776 446999999999999 3 367778888777787777655 47789999999999999999877 68
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc---CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ---DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~---~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
++||+++++.+|+.|+++.+.+.+|.+.+....... ..........+|++|+++ |||+|+ +++++|+++++||++
T Consensus 214 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 214 GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred cEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence 899999999999999999999999976432111110 111223456799999998 999998 999999999999863
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=310.97 Aligned_cols=304 Identities=17% Similarity=0.148 Sum_probs=241.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCC-------cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHh
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPD-------YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYL 81 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~ 81 (684)
.+++|+|||||||||||+++++.|+++ | ++|++++|+..... . ....+++++.+|+.|.+.+..+
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~-----~-~~~~~~~~~~~Dl~d~~~~~~~ 82 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAP-----A-GFSGAVDARAADLSAPGEAEKL 82 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCC-----T-TCCSEEEEEECCTTSTTHHHHH
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCccc-----c-ccCCceeEEEcCCCCHHHHHHH
Confidence 356689999999999999999999999 7 89999999642110 0 1234688999999999999888
Q ss_pred hccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC----CCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 82 LVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG----QVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 82 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
+. .++|+|||+|+.... .+..++...+++|+.++.+++++|++.+ .+++||++||..+|+..... +.+|++
T Consensus 83 ~~-~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~---~~~E~~ 157 (342)
T 2hrz_A 83 VE-ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY---PIPDEF 157 (342)
T ss_dssp HH-TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS---SBCTTC
T ss_pred Hh-cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC---CcCCCC
Confidence 74 489999999997542 2235677889999999999999998864 37899999999999875332 346778
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeC-CCCCC---CChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYG-PNQFP---EKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
+..|.+.|+.+|.++|.+++.++.+++++.+++|++.+|| |+... ..++..++.....+.+..++.+++..++++|
T Consensus 158 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T 2hrz_A 158 HTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHAS 237 (342)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEEC
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEe
Confidence 8889999999999999999999888789999999999998 65421 2366777777788887777666677788999
Q ss_pred HHHHHHHHHHHHhcCC----CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCC----CCCcceecCHHHHHh
Q 035631 234 CADVAEAFDVILHRGV----IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRP----FNDHRYFLDDQKLKR 305 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~----~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~d~~k~~~ 305 (684)
++|+|++++.+++.+. .+++||++ ++.+|+.|+++.+.+.+|.+....+.+.+... .......+|++|+++
T Consensus 238 v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 316 (342)
T 2hrz_A 238 PRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARE 316 (342)
T ss_dssp HHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHH
T ss_pred hHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHH
Confidence 9999999999998653 46799996 57899999999999999865321122222110 011123579999988
Q ss_pred cCCcccCCHHHHHHHHHHHHH
Q 035631 306 LGWKEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 306 lg~~p~~~~~e~i~~~i~~~~ 326 (684)
|||+|.++++++|+++++|++
T Consensus 317 lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 317 LGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp TTCCCCSSHHHHHHHHHHHHS
T ss_pred cCCCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999997
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=337.12 Aligned_cols=321 Identities=27% Similarity=0.394 Sum_probs=243.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
+.+++|+|||||||||||++|+++|+++ |++|++++|+..... ...+.. ....+++++.+|+.|.+.+.+++...
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~v~~v~~Dl~d~~~l~~~~~~~ 83 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEV-LTKHHIPFYEVDLCDRKGLEKVFKEY 83 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHH-HHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhh-ccCCceEEEEcCCCCHHHHHHHHHhC
Confidence 3445689999999999999999999999 899999998643110 000000 01246889999999999999988545
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCC-CCCCCCCCCCCCCCCh
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME-SDIGNPEASQLLPTNP 164 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~e~~~~~p~~~ 164 (684)
++|+|||+|+.........++...+++|+.++.+++++|++.+ +++||++||.++||..... ...+.+|..+..|.+.
T Consensus 84 ~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~ 162 (699)
T 1z45_A 84 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNP 162 (699)
T ss_dssp CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSH
T ss_pred CCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCCh
Confidence 8999999999765433334567789999999999999999887 8999999999999864321 1123356677788899
Q ss_pred hHHHHHHHHHHHHHHHHh--cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHc-CCceEEec------CC
Q 035631 165 YSATKAGAEMLVMAYHRS--YGLPTITTRGNNVYGPNQF----------PEKLIPKFILLAMK-GQQLPIHG------NG 225 (684)
Q Consensus 165 Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~ 225 (684)
|+.+|.++|.+++.++.+ .+++++++||+++||+... +..+++.+...... +.++.+++ ++
T Consensus 163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 242 (699)
T 1z45_A 163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG 242 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence 999999999999998776 6899999999999998521 23456655444432 34566655 67
Q ss_pred CceEecccHHHHHHHHHHHHhcC-------CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceec
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG-------VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFL 298 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~-------~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 298 (684)
++.++|+|++|+|++++.+++.. ..+++||+++++.+|+.|+++.+.+.+|.+.+.. ..+..........+
T Consensus 243 ~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~ 320 (699)
T 1z45_A 243 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK--VTGRRAGDVLNLTA 320 (699)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------CCCCCB
T ss_pred CeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce--ecCCCCCccccccC
Confidence 88899999999999999988642 2247999999999999999999999999765422 22222223345678
Q ss_pred CHHHHHh-cCCcccCCHHHHHHHHHHHHHhCCCcccc
Q 035631 299 DDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGD 334 (684)
Q Consensus 299 d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~~ 334 (684)
|++|+++ |||+|+++++++|+++++|++++..++..
T Consensus 321 d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~~ 357 (699)
T 1z45_A 321 KPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQL 357 (699)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSCC
T ss_pred CHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcchhh
Confidence 9999987 99999999999999999999998755433
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=308.50 Aligned_cols=297 Identities=20% Similarity=0.239 Sum_probs=233.9
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
+|||||||||||++++++|+++..|++|++++|+.... .+++++.+|+.|.+.+.+++...++|+|||+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 69 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHL 69 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----------TTCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----------cCceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence 59999999999999999999872268999998864210 1567899999999999998855589999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 173 (684)
|+.... ....++...+++|+.++.+++++|++.+ +++|||+||.++|+..... .+.+|+.+..|.+.|+.+|.++|
T Consensus 70 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 70 AGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPK--NKVPSITITRPRTMFGVTKIAAE 145 (317)
T ss_dssp CCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCS--SSBCSSSCCCCCSHHHHHHHHHH
T ss_pred CcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCC--CCccccccCCCCchHHHHHHHHH
Confidence 997542 1235677889999999999999999987 8999999999999865321 22356677888999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 174 MLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 174 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
.+++.++++++++++++||+.+||+...+. ..+..++.....++++..+++++..++|+|++|+|++++.+++++.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~ 225 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADR 225 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence 999998888899999999999999754221 2233333444455666677778888999999999999999998653
Q ss_pred ----CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCC---CCCcceecCHHHHHh-cCCcccCCHHHHHHHH
Q 035631 250 ----IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRP---FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT 321 (684)
Q Consensus 250 ----~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~ 321 (684)
.+++||+++ ..+|+.|+++.+.+.+|.. . +.+.+... .......+|++|+++ |||+|+++++++|+++
T Consensus 226 ~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~-~--i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~ 301 (317)
T 3ajr_A 226 DKLVLRNGYNVTA-YTFTPSELYSKIKERIPEF-E--IEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDM 301 (317)
T ss_dssp GGCSSCSCEECCS-EEECHHHHHHHHHTTCCSC-C--EEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred cccccCceEecCC-ccccHHHHHHHHHHHCCcc-c--cccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 247999996 6799999999999998731 1 22222100 011234689999987 9999999999999999
Q ss_pred HHHHHhCC
Q 035631 322 LEWYKKNP 329 (684)
Q Consensus 322 i~~~~~~~ 329 (684)
++|++++.
T Consensus 302 ~~~~~~~~ 309 (317)
T 3ajr_A 302 IDHISEKL 309 (317)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhh
Confidence 99998754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=302.99 Aligned_cols=271 Identities=20% Similarity=0.190 Sum_probs=215.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
.|+|+|||||| ||||++|++.|+++ |++|++++|+... ...+. ..+++++.+|+.|.+ + .++|+
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~----~~~~~~~~~D~~d~~-----~--~~~d~ 66 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSRNPDQ--MEAIR----ASGAEPLLWPGEEPS-----L--DGVTH 66 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEESCGGG--HHHHH----HTTEEEEESSSSCCC-----C--TTCCE
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEcChhh--hhhHh----hCCCeEEEecccccc-----c--CCCCE
Confidence 46789999998 99999999999999 8999999997521 11111 247899999999843 3 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL--TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|||+|+..... ++ .+.+++++|++ .+ +++|||+||.++||..... +.+|+++..|.+.|+.
T Consensus 67 vi~~a~~~~~~----~~---------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~---~~~E~~~~~p~~~Y~~ 129 (286)
T 3ius_A 67 LLISTAPDSGG----DP---------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGA---WVDETTPLTPTAARGR 129 (286)
T ss_dssp EEECCCCBTTB----CH---------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTC---EECTTSCCCCCSHHHH
T ss_pred EEECCCccccc----cH---------HHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCC---CcCCCCCCCCCCHHHH
Confidence 99999975432 11 25789999988 45 8999999999999976543 2478888899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
+|.++|++++.+ .+++++++||+++||++... +..+..+....+.++ .+.++|+|++|+|++++.++++
T Consensus 130 sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~ 198 (286)
T 3ius_A 130 WRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP-------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMAR 198 (286)
T ss_dssp HHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS-------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhh---cCCCEEEEeccceECCCchH-------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhC
Confidence 999999999876 58999999999999997532 122345666666555 5778999999999999999998
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCC------CCcceecCHHHHHh-cCCcccC-CHHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF------NDHRYFLDDQKLKR-LGWKEKT-PWEEGLK 319 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~------~~~~~~~d~~k~~~-lg~~p~~-~~~e~i~ 319 (684)
+..+++||+++++++|+.|+++.+.+.+|.+.+..+........ ......+|++|+++ |||+|++ +++++|+
T Consensus 199 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~ 278 (286)
T 3ius_A 199 PDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLE 278 (286)
T ss_dssp CCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHH
T ss_pred CCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHH
Confidence 88888999999999999999999999999876543333221111 12456789999998 9999998 7999999
Q ss_pred HHHHH
Q 035631 320 LTLEW 324 (684)
Q Consensus 320 ~~i~~ 324 (684)
++++.
T Consensus 279 ~~~~~ 283 (286)
T 3ius_A 279 ALQAD 283 (286)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99864
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=333.64 Aligned_cols=308 Identities=23% Similarity=0.345 Sum_probs=245.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH-HHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL-MNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~d 88 (684)
+++|+|||||||||||++++++|++++ |++|++++|+... ...+ ....+++++.+|+.|.+. +..++ .++|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r~~~~--~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~--~~~D 384 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDA--ISRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCD 384 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEESCCTT--TGGG---TTCTTEEEEECCTTTCHHHHHHHH--HHCS
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEcCchh--hhhh---ccCCceEEEECCCCCcHHHHHHhh--cCCC
Confidence 356899999999999999999999973 6899999997531 1111 123578999999998765 66677 5899
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC-------CC
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL-------LP 161 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~-------~p 161 (684)
+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++||...... .+|+++. .|
T Consensus 385 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~---~~E~~~~~~~~p~~~p 459 (660)
T 1z7e_A 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKY---FDEDHSNLIVGPVNKP 459 (660)
T ss_dssp EEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSS---BCTTTCCEEECCTTCT
T ss_pred EEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcc---cCCCccccccCcccCC
Confidence 9999999765433345677899999999999999999976 8999999999998754332 2444331 45
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--------EKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+.|+.+|.++|.+++.++++++++++++||++|||++... ..+++.++..+..+.++.+++++++.++|+|
T Consensus 460 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 460 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 66899999999999999988889999999999999997642 4577888888888888888888889999999
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEecCCC-ccCHHHHHHHHHHHhCCCCCc-ceeec------------cCCCCCCcce
Q 035631 234 CADVAEAFDVILHRGV---IGHVYNVGTKK-ERSVLDVAADICTLFKLEPEK-TIHYV------------QDRPFNDHRY 296 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~---~~~~~ni~~~~-~~t~~e~~~~i~~~~g~~~~~-~~~~~------------~~~~~~~~~~ 296 (684)
++|+|++++.+++++. .+++||+++++ ++|+.|+++.+.+.+|..... .+... ..........
T Consensus 540 v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 619 (660)
T 1z7e_A 540 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR 619 (660)
T ss_dssp HHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCC
T ss_pred HHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhc
Confidence 9999999999998653 57899999986 899999999999998864321 11100 0001122345
Q ss_pred ecCHHHHHh-cCCcccCCHHHHHHHHHHHHHhCCC
Q 035631 297 FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 297 ~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
.+|++|+++ |||+|+++++++|+++++|++++.+
T Consensus 620 ~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 620 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred ccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 789999987 9999999999999999999988763
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=306.82 Aligned_cols=277 Identities=15% Similarity=0.161 Sum_probs=222.5
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeEeee---eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhH
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFG---TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVET 445 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~---~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 445 (684)
.|+|+|||||||||||++|+++|+++|++|..+ .+|++|.+.+.++++..++|+|||+|+.. ....+..++...
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~ 79 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYT---KVDQAEKERDLA 79 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHH
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCccc---ChHHHhcCHHHH
Confidence 356799999999999999999999999999664 57999999999999976779999999976 445556788899
Q ss_pred hhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhh
Q 035631 446 IRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICI 525 (684)
Q Consensus 446 ~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~ 525 (684)
+++|+.++.+++++|++.++|+||+||++||++....+ ++|++++. |.+.|+.+|..+|.+...... ++.+
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~~~~~~~~--~~~i 150 (287)
T 3sc6_A 80 YVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEG------YDEFHNPA-PINIYGASKYAGEQFVKELHN--KYFI 150 (287)
T ss_dssp HHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSC------BCTTSCCC-CCSHHHHHHHHHHHHHHHHCS--SEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCC------CCCCCCCC-CCCHHHHHHHHHHHHHHHhCC--CcEE
Confidence 99999999999999999999999999999998766655 89999988 999999999999988654332 4556
Q ss_pred hhhhhhhHHH---HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeE
Q 035631 526 ECLINFQVEG---LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWN 602 (684)
Q Consensus 526 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~n 602 (684)
.|+..+++++ +...+........++.+.|+ +.++| +|++|+|++++.+++++.+|+||
T Consensus 151 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------i~v~Dva~~~~~~~~~~~~~~~~ 211 (287)
T 3sc6_A 151 VRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD--QIGSP-----------------TYVADLNVMINKLIHTSLYGTYH 211 (287)
T ss_dssp EEECSEECSSSCCHHHHHHHHHTTCSEEEEECS--CEECC-----------------EEHHHHHHHHHHHHTSCCCEEEE
T ss_pred EeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC--cccCc-----------------eEHHHHHHHHHHHHhCCCCCeEE
Confidence 6666555432 22222332333333444443 45566 99999999999999987788999
Q ss_pred ecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 603 FTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 603 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+++++.+|+.|+++.+.+.+|.+..+.+++..+.+....++. ...+|++|+ +++|.+..+|+++|+++++++.+
T Consensus 212 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 212 VSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPK-YSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp CCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCS-BCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred EcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCC-cccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 999999999999999999999877776666554443444445 678999999 77888899999999999998865
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=297.62 Aligned_cols=298 Identities=15% Similarity=0.124 Sum_probs=229.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCC-----cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCC-
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPD-----YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEG- 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g-----~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~- 86 (684)
|+|||||||||||++++++|+++ | ++|++++|+..... ....+++++.+|+.|.+.+.+++...+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 68999999999999999999998 7 99999999753211 123578999999999999999884333
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEE-------EEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFI-------HVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i-------~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||+|+... .++...+++|+.++.+++++|++.+ .+++|| |+||.++||..... ..+.+|+++
T Consensus 73 ~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~-~~~~~E~~~ 146 (364)
T 2v6g_A 73 VTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH-DPPYTEDLP 146 (364)
T ss_dssp CCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC-CSSBCTTSC
T ss_pred CCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC-CCCCCcccc
Confidence 999999999753 4677899999999999999999872 389998 89999999875311 123356665
Q ss_pred CCC-CChhHHHHHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCCC--CChHHH-HHHHH--HcCCceEEecCCC---ce
Q 035631 159 LLP-TNPYSATKAGAEMLVMAYHRSYG-LPTITTRGNNVYGPNQFP--EKLIPK-FILLA--MKGQQLPIHGNGS---NV 228 (684)
Q Consensus 159 ~~p-~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~--~~~~~~-~~~~~--~~~~~~~~~~~~~---~~ 228 (684)
..| .+.| ..+|+.+++++++++ ++++++||++|||++... ..+++. +...+ ..+.++.++++++ ..
T Consensus 147 ~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 222 (364)
T 2v6g_A 147 RLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGY 222 (364)
T ss_dssp CCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSC
T ss_pred CCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccccc
Confidence 554 6678 458999988877676 999999999999997642 223444 33434 3677777667763 44
Q ss_pred EecccHHHHHHHHHHHHhcCC-CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcc---eeec------------------
Q 035631 229 RSYLYCADVAEAFDVILHRGV-IGHVYNVGTKKERSVLDVAADICTLFKLEPEKT---IHYV------------------ 286 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~-~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~---~~~~------------------ 286 (684)
.++++++|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.... +...
T Consensus 223 ~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 302 (364)
T 2v6g_A 223 SDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRE 302 (364)
T ss_dssp BCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHH
Confidence 788899999999999998764 577999999999999999999999999754311 1110
Q ss_pred cC-CCCC--C------------cc-eecCHHHHHhcCCcccCCHHHHHHHHHHHHHhCC
Q 035631 287 QD-RPFN--D------------HR-YFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 287 ~~-~~~~--~------------~~-~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
.. .+.. . .. ..+|++|+++|||+|.++++++|+++++|+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 303 NGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp TTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred hCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 00 0100 0 23 4789999988999999999999999999998765
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=299.47 Aligned_cols=304 Identities=19% Similarity=0.147 Sum_probs=229.6
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEE-EecCCCHHHHHHhhc
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFL-KGDITCADLMNYLLV 83 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~-~~Dl~d~~~~~~~~~ 83 (684)
+.+++|+|||||||||||+++++.|+++ |++|++++|+... ...+... ....+++++ .+|+.|.+.+.+++
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~- 81 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASK--LANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI- 81 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCccc--HHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-
Confidence 3456689999999999999999999999 8999999996421 1111000 011467888 79999999888887
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCC-CCCCCCCCC-----
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME-SDIGNPEAS----- 157 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~e~~----- 157 (684)
.++|+|||+|+..... .++...+++|+.++.+++++|.+...+++|||+||.++|+..... ...+.+|++
T Consensus 82 -~~~d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~ 157 (342)
T 1y1p_A 82 -KGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLES 157 (342)
T ss_dssp -TTCSEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHH
T ss_pred -cCCCEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchh
Confidence 5899999999976532 467889999999999999999853338999999999998643211 001123433
Q ss_pred -----------CCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCceEE
Q 035631 158 -----------QLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPE---KLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 158 -----------~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~ 221 (684)
+..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...+. ..++.++..+..+++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T 1y1p_A 158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA 237 (342)
T ss_dssp HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH
T ss_pred hhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccc
Confidence 23456789999999999999998775 68899999999999976432 277888888888887765
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcCC-CCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCH
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRGV-IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~ 300 (684)
++++ ..++|+|++|+|++++.++.++. .++.+ +++++.+|+.|+++.+.+.+|.. .......+ .......+|+
T Consensus 238 ~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~~~~~~~~---~~~~~~~~d~ 311 (342)
T 1y1p_A 238 LALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-TFPADFPD---QGQDLSKFDT 311 (342)
T ss_dssp HHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-CCCCCCCC---CCCCCCEECC
T ss_pred cccC-CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-cCCCCCCc---cccccccCCh
Confidence 5655 67899999999999999998754 34444 45577899999999999999864 11111111 1112367899
Q ss_pred HHHHh-cCC---cccCCHHHHHHHHHHHHH
Q 035631 301 QKLKR-LGW---KEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 301 ~k~~~-lg~---~p~~~~~e~i~~~i~~~~ 326 (684)
+|+++ ||| .+.++++++|+++++|++
T Consensus 312 ~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 312 APSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred HHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 99987 776 566799999999998864
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=304.95 Aligned_cols=306 Identities=18% Similarity=0.211 Sum_probs=211.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
|+|+|||||||||||++|+++|+++ |++|+++.|+..... ...+.......+++++.+|+.|.+.+..++ .++|+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 83 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI--AGCDF 83 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH--TTCSE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH--cCCCE
Confidence 4689999999999999999999999 899999888642110 000000001246889999999998888888 68999
Q ss_pred EEEcCccCCcCCCCCChH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc-cccCCCCCCCCCCCCCC--------CC
Q 035631 90 IMHFAAQTHVDNSFGNSF-EFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE-VYGETDMESDIGNPEAS--------QL 159 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~e~~--------~~ 159 (684)
|||+|+.... ...++. ..+++|+.++.+++++|++.+.++||||+||.+ +|+........+.+|++ +.
T Consensus 84 Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 161 (338)
T 2rh8_A 84 VFHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA 161 (338)
T ss_dssp EEEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC------
T ss_pred EEEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcccc
Confidence 9999996532 223333 478999999999999999875489999999987 44321110001123332 11
Q ss_pred CCC-ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCceEEecC------CCceEe
Q 035631 160 LPT-NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGN------GSNVRS 230 (684)
Q Consensus 160 ~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 230 (684)
.|. ..|+.+|.++|.+++.+.++++++++++||++||||+.... ..+..+. ....+.... ++. +...++
T Consensus 162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~ 239 (338)
T 2rh8_A 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFL-INGMKGMQMLSGSVS 239 (338)
T ss_dssp -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHH-HHHHHHHHHHHSSEE
T ss_pred CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-cccccccccccCccc
Confidence 222 26999999999999998877799999999999999975322 1122221 122333221 111 112348
Q ss_pred cccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCC-CCCcceeeccCCCCCCcceecCHHHHHhcCCc
Q 035631 231 YLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKL-EPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWK 309 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~ 309 (684)
|+|++|+|++++.+++++..++.|++++ ..+|+.|+++.+.+..+. ..+ ..+.+ .+. .....+|++|+++|||+
T Consensus 240 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~--~~~~~-~~~-~~~~~~d~~k~~~lG~~ 314 (338)
T 2rh8_A 240 IAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVP--TDFGD-FPP-KSKLIISSEKLVKEGFS 314 (338)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCC--CCCTT-SCS-SCSCCCCCHHHHHHTCC
T ss_pred EEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCC--CCCCC-CCc-CcceeechHHHHHhCCC
Confidence 9999999999999998766667898875 468999999999998763 211 11111 111 11267899999779999
Q ss_pred ccCCHHHHHHHHHHHHHhCC
Q 035631 310 EKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~ 329 (684)
|+++++++|+++++|+++.+
T Consensus 315 p~~~l~~gl~~~~~~~~~~~ 334 (338)
T 2rh8_A 315 FKYGIEEIYDESVEYFKAKG 334 (338)
T ss_dssp CSCCHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999998764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=297.58 Aligned_cols=304 Identities=17% Similarity=0.222 Sum_probs=215.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCC-CCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRA-SPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
++++|||||||||||++|+++|+++ |++|+++.|+.... ....+..... ..+++++.+|+.|.+.+..++ .++|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 79 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI--KGCT 79 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH--TTCS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH--cCCC
Confidence 4579999999999999999999999 89999998864211 1111101100 125788999999999988888 6899
Q ss_pred EEEEcCccCCcCCCCCChH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccc-ccCCCCCCCCCCCCCCCC-------
Q 035631 89 TIMHFAAQTHVDNSFGNSF-EFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEV-YGETDMESDIGNPEASQL------- 159 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~~~~------- 159 (684)
+|||+|+.... ...++. ..+++|+.++.+++++|++.+.++||||+||.++ |+...... ..+|..+.
T Consensus 80 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~--~~~E~~~~~~~~~~~ 155 (337)
T 2c29_D 80 GVFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRA 155 (337)
T ss_dssp EEEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCS--EECTTCCCCHHHHHH
T ss_pred EEEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCc--ccCcccCCchhhhcc
Confidence 99999986532 223443 5789999999999999998765799999999874 54322111 12333211
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHH--HHcCCceEEecCCCceEecccHH
Q 035631 160 --LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILL--AMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 --~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.|.+.|+.+|.++|.+++.+.+.++++++++||++||||+.... +...+... ...+.... ++.. ....|+|++
T Consensus 156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~ 232 (337)
T 2c29_D 156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS-MPPSLITALSPITGNEAH-YSII-RQGQFVHLD 232 (337)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS-CCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC-CCchHHHHHHHHcCCCcc-cccc-CCCCEEEHH
Confidence 14457999999999999988877799999999999999975432 11111111 12233221 1221 234599999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCC-CCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCH
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKL-EPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPW 314 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~ 314 (684)
|+|++++.+++++..++.|++++ ...|+.|+++.+.+.++. ..+ ..+.. .........+|++|+++|||+|++++
T Consensus 233 Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~~~-~~~~~~~~~~d~~k~~~lG~~p~~~l 308 (337)
T 2c29_D 233 DLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIP--TEFKG-VDENLKSVCFSSKKLTDLGFEFKYSL 308 (337)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCC--SCCTT-CCTTCCCCEECCHHHHHHTCCCCCCH
T ss_pred HHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCC--CCCCc-ccCCCccccccHHHHHHcCCCcCCCH
Confidence 99999999998766566887764 568999999999998742 211 11111 11122456789999966999999999
Q ss_pred HHHHHHHHHHHHhCC
Q 035631 315 EEGLKLTLEWYKKNP 329 (684)
Q Consensus 315 ~e~i~~~i~~~~~~~ 329 (684)
+++|+++++|+++.+
T Consensus 309 ~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 309 EDMFTGAVDTCRAKG 323 (337)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999998765
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=291.45 Aligned_cols=302 Identities=21% Similarity=0.240 Sum_probs=210.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC-CCcc-cccccCCCCC-CCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK-LDYC-SSLKNLHPSR-ASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~-~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+|+|||||||||||++++++|+++ |++|+++.| +... .....+.... ...+++++.+|+.|.+.+..++ .++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 76 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI--EGCV 76 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH--TTCS
T ss_pred CCEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH--cCCC
Confidence 378999999999999999999999 899999988 4311 1111110000 0124678889999999999988 6899
Q ss_pred EEEEcCccCCcCCCCCCh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccc-cCCCCCCCCCCCCCCCC-------
Q 035631 89 TIMHFAAQTHVDNSFGNS-FEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVY-GETDMESDIGNPEASQL------- 159 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vy-g~~~~~~~~~~~e~~~~------- 159 (684)
+|||+|+... ....++ ...+++|+.++.+++++|++.+.+++|||+||.+++ +..... ...+|+++.
T Consensus 77 ~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~--~~~~e~~~~~~~~~~~ 152 (322)
T 2p4h_X 77 GIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDK--DVLDESDWSDVDLLRS 152 (322)
T ss_dssp EEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCC--SEECTTCCCCHHHHHH
T ss_pred EEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCC--eecCCccccchhhhcc
Confidence 9999997542 222232 348899999999999999987238999999998754 332111 112333221
Q ss_pred -CCCC-hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 160 -LPTN-PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 -~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.|.+ .|+.+|.++|.+++++++.++++++++||++|||+..... ..+..+. ....+....+ +. ..++|+|++
T Consensus 153 ~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~-~~~~g~~~~~-~~--~~~~~i~v~ 228 (322)
T 2p4h_X 153 VKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKAL-VLVLGKKEQI-GV--TRFHMVHVD 228 (322)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHT-HHHHSCGGGC-CE--EEEEEEEHH
T ss_pred cCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHH-HHHhCCCccC-cC--CCcCEEEHH
Confidence 2333 6999999999999998887899999999999999975322 1121221 1233433322 22 334899999
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCC-CCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCH
Q 035631 236 DVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKL-EPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPW 314 (684)
Q Consensus 236 D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~ 314 (684)
|+|++++.+++++...+.|| ++++.+|+.|+++.+.+.++. ..+..... .... ......+|++|+++|||+|++++
T Consensus 229 Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~~~d~~k~~~lG~~p~~~~ 305 (322)
T 2p4h_X 229 DVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDEL-KEIK-GARLPDLNTKKLVDAGFDFKYTI 305 (322)
T ss_dssp HHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTT-TTCC-CEECCEECCHHHHHTTCCCCCCH
T ss_pred HHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccc-cCCC-CCcceecccHHHHHhCCccCCCH
Confidence 99999999998755445699 567889999999999987742 11100000 0001 11346789999977999999999
Q ss_pred HHHHHHHHHHHHhC
Q 035631 315 EEGLKLTLEWYKKN 328 (684)
Q Consensus 315 ~e~i~~~i~~~~~~ 328 (684)
+++|+++++|++++
T Consensus 306 ~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 306 EDMFDDAIQCCKEK 319 (322)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999865
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=287.89 Aligned_cols=279 Identities=15% Similarity=0.094 Sum_probs=212.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||++|+++|+++ ||+|++++|++.. ..+..| +.....+ .++|+|||
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~---------------~~~~~~----~~~~~~l--~~~d~vih 57 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGP---------------GRITWD----ELAASGL--PSCDAAVN 57 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCT---------------TEEEHH----HHHHHCC--CSCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCc---------------Ceeecc----hhhHhhc--cCCCEEEE
Confidence 78999999999999999999999 8999999996421 112222 2223334 78999999
Q ss_pred cCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 93 FAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 93 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
+|+...... +.......++.|+.++.+|+++++..+ +..+||++||.++||...... .+|+++..+.+.|+.
T Consensus 58 la~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~---~~E~~p~~~~~~~~~ 134 (298)
T 4b4o_A 58 LAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAE---YDEDSPGGDFDFFSN 134 (298)
T ss_dssp CCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCC---BCTTCCCSCSSHHHH
T ss_pred eccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCc---ccccCCccccchhHH
Confidence 998543211 112334677899999999999998865 245699999999999876543 367788888899999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.|...|... .....+++++++||+.|||++. ..+..+......+... ..+++++.++|||++|+|+++..++++
T Consensus 135 ~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~---~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~ 208 (298)
T 4b4o_A 135 LVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGG---GAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEA 208 (298)
T ss_dssp HHHHHHHHH--CCSSSSSEEEEEEECEEECTTS---HHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH--HhhccCCceeeeeeeeEEcCCC---CchhHHHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhC
Confidence 888877654 2344588999999999999975 4566666666666543 458899999999999999999999998
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc-C-------CCCCCcceecCHHHHHhcCCcccC-CHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ-D-------RPFNDHRYFLDDQKLKRLGWKEKT-PWEEGL 318 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~-~-------~~~~~~~~~~d~~k~~~lg~~p~~-~~~e~i 318 (684)
+...++||+++++++|+.|+++.+++.+|.+....++... . ...-.....++++|++++||++++ +++++|
T Consensus 209 ~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al 288 (298)
T 4b4o_A 209 NHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAAL 288 (298)
T ss_dssp TTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHH
T ss_pred CCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHH
Confidence 8878899999999999999999999999975432221100 0 000001224677899999999997 599999
Q ss_pred HHHHH
Q 035631 319 KLTLE 323 (684)
Q Consensus 319 ~~~i~ 323 (684)
+++++
T Consensus 289 ~~l~~ 293 (298)
T 4b4o_A 289 KEIAE 293 (298)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99987
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=301.84 Aligned_cols=280 Identities=19% Similarity=0.167 Sum_probs=220.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------------eeeeccCCChhHHHHHHHhcCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------------EFGTGRLEDKNSLLDDMKRVRP 420 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~d~~d~~~~~~~~~~~~~ 420 (684)
++|+|||||||||||++|+++|+++|++| +++.+|++|.+.+.++++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV-- 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC--
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC--
Confidence 34699999999999999999999999876 34568999999999999865
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
|+|||+|+.. ....+..++...+++|+.++.+++++|++.++ ++||+||+++|+.....+ ++|+++.. |
T Consensus 102 d~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~-p 171 (351)
T 3ruf_A 102 DHVLHQAALG---SVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALP------KVEENIGN-P 171 (351)
T ss_dssp SEEEECCCCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS------BCTTCCCC-C
T ss_pred CEEEECCccC---CcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCC------CccCCCCC-C
Confidence 9999999965 34556677888999999999999999999987 699999999998766655 89999888 9
Q ss_pred CChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH---------HHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 500 RSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG---------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.+.|+.+|..+|.+... ...+.++.+.|+.++++.+ +...+...+..+.++.++|++.+.++|
T Consensus 172 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~------ 245 (351)
T 3ruf_A 172 LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDF------ 245 (351)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC------
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEee------
Confidence 99999999999988543 3446777888888776653 233344444455556677888888888
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRS 645 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 645 (684)
+|++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.+|.+...................
T Consensus 246 -----------i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~- 313 (351)
T 3ruf_A 246 -----------CYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVR- 313 (351)
T ss_dssp -----------EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCS-
T ss_pred -----------EEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccc-
Confidence 99999999999999872 567999999999999999999999999733222211110011111223
Q ss_pred CCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 646 NNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 646 ~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 314 ~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 314 HSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFL 349 (351)
T ss_dssp BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred eeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 668999999 3688888899999999999887643
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=297.56 Aligned_cols=277 Identities=17% Similarity=0.211 Sum_probs=216.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC--CeE------------------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG--IAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g--~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
++|+|||||||||||++|+++|+++| ++| .++.+|++|.+.+.+++++.++|+|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 102 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI 102 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence 45799999999999999999999999 433 4568899999999999999677999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCC-CCCCCCCCCCccCCCCCCCCC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDS-MHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~-~~~~~~~~~~~e~~~~~~p~~ 501 (684)
||+|+.. ....+..++..++++|+.++.+++++|++.+++ +||+||++||+... ..+ ++|+++.. |.+
T Consensus 103 ih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~------~~E~~~~~-p~~ 172 (346)
T 4egb_A 103 VNFAAES---HVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGR------FTEETPLA-PNS 172 (346)
T ss_dssp EECCCCC------------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCC------BCTTSCCC-CCS
T ss_pred EECCccc---chhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCC------cCCCCCCC-CCC
Confidence 9999976 344456788899999999999999999999874 99999999998653 233 89999988 999
Q ss_pred hhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 502 FYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
.|+.+|..+|.+... ...+.++.+.|+..+++.+ ....+...+..+.++.++|++...++|
T Consensus 173 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 240 (346)
T 4egb_A 173 PYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDW------------ 240 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECE------------
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEee------------
Confidence 999999999988544 3346677788888776653 344444445555567777888888888
Q ss_pred cCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchh
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+......... ...... ...+|++|
T Consensus 241 -----i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~-~~~~d~~k 310 (346)
T 4egb_A 241 -----LHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD----RLGHDR-RYAINAEK 310 (346)
T ss_dssp -----EEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC------CCCS-CCCBCCHH
T ss_pred -----EEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCC----CCCCcc-eeeccHHH
Confidence 99999999999999877 45599999999999999999999999976442221111 111123 56789999
Q ss_pred h--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 654 L--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 654 l--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
+ .++|.+..+++++|+++++++.+.
T Consensus 311 ~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 311 MKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 9 467888889999999999887654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=295.79 Aligned_cols=279 Identities=15% Similarity=0.098 Sum_probs=219.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC-------eEeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccch
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI-------AFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHR 442 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~-------~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 442 (684)
++|+|||||||||||++|+++|+++|+ .+.++.+|++|.+.+.+++++.++|+|||+|+..+ .......++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~ 82 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG--GLFRNIKYN 82 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC--CHHHHTTCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEECceecc--cccccccCH
Confidence 567999999999999999999999996 23556899999999999999977899999999652 123456778
Q ss_pred hhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC----CCCCCCC-hhhhhhHhHhhhhhH
Q 035631 443 VETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD----EPNFTRS-FYSKTKAMVTFLSYL 516 (684)
Q Consensus 443 ~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~----~~~~p~~-~Y~~sK~~~E~~~~~ 516 (684)
...+++|+.++.+++++|++.++ ++||+||++||+.....+ ++|++ ++. |.+ .|+.+|.++|.+...
T Consensus 83 ~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~-p~~~~Y~~sK~~~E~~~~~ 155 (319)
T 4b8w_A 83 LDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP------IDETMIHNGPPH-NSNFGYSYAKRMIDVQNRA 155 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSS------BCGGGGGBSCCC-SSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCC------ccccccccCCCC-CCcchHHHHHHHHHHHHHH
Confidence 89999999999999999999987 699999999999766555 88886 555 666 599999999988544
Q ss_pred --HhhhhhhhhhhhhhhhHHHH---------HHhhhhh----hccccccceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 517 --EIFVLVICIECLINFQVEGL---------LKAYENV----CTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 517 --~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
...+.++.+.|+.++++++. .+.+... +..+.++.++|++.+.++| +|
T Consensus 156 ~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------------i~ 218 (319)
T 4b8w_A 156 YFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQF-----------------IY 218 (319)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECE-----------------EE
T ss_pred HHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEE-----------------Ee
Confidence 44566777888887765542 2222222 3444556777888888888 99
Q ss_pred hhhHHHHHHHHHhcC---ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-h
Q 035631 582 LDEMLPIAIEMARRN---CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-K 656 (684)
Q Consensus 582 v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~ 656 (684)
++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.+|.+..+...+.. ..... ...+|++|+ + +
T Consensus 219 v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~-~~~~d~~k~~~~l 292 (319)
T 4b8w_A 219 SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK-----SDGQF-KKTASNSKLRTYL 292 (319)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS-----CCCCS-CCCBCCHHHHHHC
T ss_pred HHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC-----CcCcc-cccCCHHHHHHhc
Confidence 999999999999874 34599999999999999999999999976544322211 11122 557899999 3 5
Q ss_pred cCCCchhHHHHHHHHHhhcccccc
Q 035631 657 EFPEVLSIKDSIIKYVLEPNKKKN 680 (684)
Q Consensus 657 ~~~~~~~~~~~l~~~~~~~~~~~~ 680 (684)
+|.+..+++++|+++++++.+..+
T Consensus 293 g~~p~~~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 293 PDFRFTPFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHh
Confidence 677888999999999998876544
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=291.99 Aligned_cols=273 Identities=15% Similarity=0.201 Sum_probs=218.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe---------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|+|+|||||||||||++|+++|+++|++|. ++.+|++ .+.+.++++++ |+|||+|+...
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~--d~Vih~a~~~~--- 74 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDV--DAVVHLAATRG--- 74 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTC--SEEEECCCCCC---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCC--CEEEEccccCC---
Confidence 357999999999999999999999999873 3468898 89999999865 99999999662
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
. .++...+++|+.++.+++++|++.+++ +||+||++||+.....+ ++|++++. |.+.|+.+|..+|++
T Consensus 75 ~----~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~~ 143 (311)
T 3m2p_A 75 S----QGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLP------WNEKELPL-PDLMYGVSKLACEHI 143 (311)
T ss_dssp S----SSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCS------BCTTSCCC-CSSHHHHHHHHHHHH
T ss_pred C----CChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC------CCCCCCCC-CCchhHHHHHHHHHH
Confidence 1 167789999999999999999999885 99999999999665555 89999888 999999999999988
Q ss_pred hhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHH
Q 035631 514 SYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEML 586 (684)
Q Consensus 514 ~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~ 586 (684)
... ...+.++.+.|+..+++.+ ....+...+..+.++.++|++...++| +|++|+|
T Consensus 144 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------------v~v~Dva 206 (311)
T 3m2p_A 144 GNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREF-----------------LYAKDAA 206 (311)
T ss_dssp HHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEE-----------------EEHHHHH
T ss_pred HHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEce-----------------EEHHHHH
Confidence 544 3346677788888776543 334444444555566677888888888 9999999
Q ss_pred HHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-hcCCCchh
Q 035631 587 PIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-KEFPEVLS 663 (684)
Q Consensus 587 ~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~~~~~~~~ 663 (684)
++++.+++++ .+++||+++++.+|+.|+++.+++.+|.+..+...+.. ....+. ...+|++|+ + ++|.+..+
T Consensus 207 ~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~-~~~~d~~k~~~~lG~~p~~~ 281 (311)
T 3m2p_A 207 KSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPN----ANEGIH-SSYMDSSKAKELLDFSTDYN 281 (311)
T ss_dssp HHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSS----BCCSCC-CBCBCCHHHHHHSCCCCSCC
T ss_pred HHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCC----CCCCcC-ceecCHHHHHHHhCCCcccC
Confidence 9999999987 67799999999999999999999999976554433221 111223 678999999 4 67877779
Q ss_pred HHHHHHHHHhhccccccC
Q 035631 664 IKDSIIKYVLEPNKKKNN 681 (684)
Q Consensus 664 ~~~~l~~~~~~~~~~~~~ 681 (684)
++++|+++++++.+..+.
T Consensus 282 ~~~~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 282 FATAVEEIHLLMRGLDDV 299 (311)
T ss_dssp HHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhcccC
Confidence 999999999998876543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=293.59 Aligned_cols=277 Identities=14% Similarity=0.133 Sum_probs=214.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
||+|||||||||||++|+++|+++|+.| .++.+|++| +.+.+++++. |+|||+|+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~--d~vih~a~~~--- 74 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGA--EEVWHIAANP--- 74 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTC--SEEEECCCCC---
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCC--CEEEECCCCC---
Confidence 3589999999999999999999999644 457789999 8898988866 9999999965
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
....+..++...+++|+.++.+++++|++.++ ++||+||+++||.....+ ++|+++.. |.+.|+.+|..+|.
T Consensus 75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~------~~E~~~~~-~~~~Y~~sK~~~e~ 147 (313)
T 3ehe_A 75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIP------TPEDYPTH-PISLYGASKLACEA 147 (313)
T ss_dssp CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSS------BCTTSCCC-CCSHHHHHHHHHHH
T ss_pred ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCC------CCCCCCCC-CCCHHHHHHHHHHH
Confidence 45566788899999999999999999999887 699999999999766555 88888887 99999999999998
Q ss_pred hhhH--HhhhhhhhhhhhhhhhHHHH----HHhhhhhhccc-cccceecCCCCCchHHHHhhhcccccccCCCccchhhH
Q 035631 513 LSYL--EIFVLVICIECLINFQVEGL----LKAYENVCTLR-LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEM 585 (684)
Q Consensus 513 ~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 585 (684)
+... ...+.++.+.|+..+++++. ...+...+... .++.++|++.+.++| +|++|+
T Consensus 148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------------i~v~Dv 210 (313)
T 3ehe_A 148 LIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-----------------IYISDC 210 (313)
T ss_dssp HHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECC-----------------EEHHHH
T ss_pred HHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeE-----------------EEHHHH
Confidence 8544 34466777888887776542 22222222222 335567888888888 999999
Q ss_pred HHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchh
Q 035631 586 LPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLS 663 (684)
Q Consensus 586 ~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~ 663 (684)
|++++.+++.. .+++||+++++++|+.|+++.+++.+|.+..+...+... . ...... ...+|++|+ +++|.+..+
T Consensus 211 a~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~-~~~~~~-~~~~d~~k~~~lG~~p~~~ 287 (313)
T 3ehe_A 211 VDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR-G-WKGDVP-VMLLSIEKLKRLGWKPRYN 287 (313)
T ss_dssp HHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC---------------CCBCCHHHHHHTCCCSCC
T ss_pred HHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCcc-C-Cccccc-eeccCHHHHHHcCCCCCCC
Confidence 99999999855 567999999999999999999999999765443322111 0 001112 567899999 778888889
Q ss_pred HHHHHHHHHhhcccccc
Q 035631 664 IKDSIIKYVLEPNKKKN 680 (684)
Q Consensus 664 ~~~~l~~~~~~~~~~~~ 680 (684)
++++|+++++++.++++
T Consensus 288 ~~e~l~~~~~~~~~~~~ 304 (313)
T 3ehe_A 288 SEEAVRMAVRDLVEDLD 304 (313)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 99999999998876543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=299.03 Aligned_cols=281 Identities=15% Similarity=0.151 Sum_probs=216.5
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------eeeeccCC-ChhHHHHHHHhcCCCeEEEcc
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------EFGTGRLE-DKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~d~~-d~~~~~~~~~~~~~d~Vih~a 427 (684)
|+||+|||||||||||++|+++|+++ |++| +++.+|++ |.+.+.++++++ |+|||||
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~--d~Vih~A 99 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKC--DVILPLV 99 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHC--SEEEECB
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccC--CEEEEcC
Confidence 45679999999999999999999999 8876 56778999 999999999987 9999999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCC------CCCCC
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP------NFTRS 501 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~------~~p~~ 501 (684)
+.. ....+..++...+++|+.++.+++++|++.+.++||+||++|||.....+ ++|++.+ ..|.+
T Consensus 100 ~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~------~~e~~~~~~~~p~~~p~~ 170 (372)
T 3slg_A 100 AIA---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQ------FDPDASALTYGPINKPRW 170 (372)
T ss_dssp CCC---CHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSS------BCTTTCCEEECCTTCTTH
T ss_pred ccc---cHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCC------CCccccccccCCCCCCCC
Confidence 976 33444567888999999999999999999887799999999999766555 6676654 12778
Q ss_pred hhhhhhHhHhhhhhHHhh-hhhhhhhhhhhhhHHH-------------HHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 502 FYSKTKAMVTFLSYLEIF-VLVICIECLINFQVEG-------------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
.|+.+|+++|.+...... +.++.+.|+.++++++ +...+...+..+.++.++|++.+.++|
T Consensus 171 ~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----- 245 (372)
T 3slg_A 171 IYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAF----- 245 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEEC-----
T ss_pred cHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEE-----
Confidence 999999999988544333 6777788888776554 333444444455556677777777888
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCC-CcccHHHHHHHHHhhcCCcccccCCchh--------
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNP-GVISHNEILELYKEYIDPQLKWSNFNLE-------- 634 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------- 634 (684)
+|++|+|++++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.+..+...+..
T Consensus 246 ------------i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 313 (372)
T 3slg_A 246 ------------TYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTS 313 (372)
T ss_dssp ------------EEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC--
T ss_pred ------------EEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccc
Confidence 99999999999999876 3569999995 8999999999999999865433221110
Q ss_pred -Hhhhhh-ccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 635 -EQAKVL-VAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 635 -~~~~~~-~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
...... .... ...+|++|+ .++|.+..+++++|+++++++.++
T Consensus 314 ~~~~~~~~~~~~-~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 314 GAYYGNGYQDVQ-NRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp -----------C-CCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred cccccCCccccc-eeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 000000 1222 567899999 468888889999999999988764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=292.47 Aligned_cols=271 Identities=12% Similarity=0.128 Sum_probs=215.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHh--cCCeEe-------------------------------eeeccCCChhHHHHH-H
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKD--KGIAFE-------------------------------FGTGRLEDKNSLLDD-M 415 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~--~g~~v~-------------------------------~~~~d~~d~~~~~~~-~ 415 (684)
++|+|||||||||||++|+++|++ +|++|. ++.+|++|.+.+..+ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 346999999999999999999999 898773 356799999999887 4
Q ss_pred HhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 416 KRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 416 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
. ++|+|||+||.. ..+..++...+++|+.++.+++++|++.++++||+||++|||.... + ++|+++
T Consensus 89 ~--~~D~vih~A~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~------~~E~~~ 154 (362)
T 3sxp_A 89 L--HFDYLFHQAAVS-----DTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-P------NVVGKN 154 (362)
T ss_dssp S--CCSEEEECCCCC-----GGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-S------BCTTSC
T ss_pred c--CCCEEEECCccC-----CccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-C------CCCCCC
Confidence 4 459999999954 2356788899999999999999999999999999999999986554 5 899998
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHH---------HHhhhhhhccccccceecCCCCCchHHHHh
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGL---------LKAYENVCTLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
.. |.+.|+.+|..+|.+........++.+.|+.++++++. ...+...+..+.++.+++++.+.++|
T Consensus 155 ~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---- 229 (362)
T 3sxp_A 155 ES-PENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDF---- 229 (362)
T ss_dssp CC-CSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEEC----
T ss_pred CC-CCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEcc----
Confidence 88 99999999999999865544446677778876665442 22333334444445666777777888
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCC
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSN 646 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 646 (684)
+|++|+|++++.+++++..|+||+++++.+|+.|+++.+.+.+| +..+...+... ...+. .
T Consensus 230 -------------i~v~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~----~~~~~-~ 290 (362)
T 3sxp_A 230 -------------VYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY----AFFQK-H 290 (362)
T ss_dssp -------------EEHHHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-----------C-C
T ss_pred -------------EEHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC----cCccc-c
Confidence 99999999999999988667999999999999999999999999 65554443320 11223 6
Q ss_pred CcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 647 NHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 647 ~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
..+|++|+ .++|.+..+++++|+++++++.+.
T Consensus 291 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 291 TQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred eecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 78899999 567877779999999999887754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=289.85 Aligned_cols=277 Identities=13% Similarity=0.080 Sum_probs=215.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|+||||||+||||++|+++|+++|++| .++.+|++|.+++.++++..++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 45799999999999999999999999976 34578999999999999966779999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+|+.. ........+...+++|+.++.+++++|++.++ ++||+||+++||.....+ ++|+++.. |.+.|
T Consensus 84 h~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~------~~e~~~~~-~~~~Y 153 (341)
T 3enk_A 84 HFAALK---AVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSP------IDETFPLS-ATNPY 153 (341)
T ss_dssp ECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSS------BCTTSCCB-CSSHH
T ss_pred ECcccc---ccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCC------CCCCCCCC-CCChh
Confidence 999966 33445567778999999999999999999886 699999999998766555 88888887 99999
Q ss_pred hhhhHhHhhhhhHH--hh-hhhhhhhhhhhhhHHHH---------------HHhhhhhhc-cccccceec------CCCC
Q 035631 504 SKTKAMVTFLSYLE--IF-VLVICIECLINFQVEGL---------------LKAYENVCT-LRLRMPISS------DLSN 558 (684)
Q Consensus 504 ~~sK~~~E~~~~~~--~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~g------~~~~ 558 (684)
+.+|..+|.+.... .. +.++.+.|+.++++.+. .+.+..... ...++.++| ++.+
T Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 233 (341)
T 3enk_A 154 GQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG 233 (341)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSC
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCe
Confidence 99999999885443 22 25667777776655421 111111111 112344555 6666
Q ss_pred CchHHHHhhhcccccccCCCccchhhHHHHHHHHHhc----CccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchh
Q 035631 559 PRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARR----NCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~----~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
.++| +|++|+|++++.++++ ..+++||+++++.+|+.|+++.+.+.+|.+..+...+..
T Consensus 234 ~~~~-----------------i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 296 (341)
T 3enk_A 234 VRDY-----------------IHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARR 296 (341)
T ss_dssp EECE-----------------EEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred eEee-----------------EEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCC
Confidence 7777 9999999999999986 256799999999999999999999999976554332211
Q ss_pred HhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 635 EQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 635 ~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
..... ...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 297 -----~~~~~-~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 337 (341)
T 3enk_A 297 -----PGDVA-ECYANPAAAAETIGWKAERDLERMCADHWRWQENNP 337 (341)
T ss_dssp -----TTCCS-EECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred -----CCCcc-ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 11122 567899999 4688888899999999999887654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=274.63 Aligned_cols=268 Identities=18% Similarity=0.144 Sum_probs=215.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||++++++|+ + |++|++++|+... . ++ +.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~------~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEI------Q-----GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCC------T-----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcC------C-----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 479999999999999999999 5 6999999997521 1 12 7899999999999885446999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+......+..++...+++|+.++.+++++|++.+ + +||++||..+|+.... +.+|.++..|.+.|+.+|.++
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~----~~~e~~~~~~~~~Y~~sK~~~ 137 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG----NYKEEDIPNPINYYGLSKLLG 137 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC----SBCTTSCCCCSSHHHHHHHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC----CcCCCCCCCCCCHHHHHHHHH
Confidence 999765433345778899999999999999999977 4 9999999999986543 336777788889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCc
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 252 (684)
|.+++. ++++++||+.|||+ ..+...+......+.++.+.++ .++++|++|+|+++..++.++. ++
T Consensus 138 e~~~~~------~~~~~iR~~~v~G~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-~g 203 (273)
T 2ggs_A 138 ETFALQ------DDSLIIRTSGIFRN----KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-TG 203 (273)
T ss_dssp HHHHCC------TTCEEEEECCCBSS----SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-CE
T ss_pred HHHHhC------CCeEEEeccccccc----cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-CC
Confidence 999865 67899999999983 3566667677777777776554 7899999999999999998765 56
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCcceeec--cCCCCCCcceecCHHHHHh-cCCcc-cCCHHHHH
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV--QDRPFNDHRYFLDDQKLKR-LGWKE-KTPWEEGL 318 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~-lg~~p-~~~~~e~i 318 (684)
+||+++ +.+|+.|+++.+.+.+|.+.+...... ...+.......+|++|+++ |||+| .+++++++
T Consensus 204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 204 IIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred eEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 999998 999999999999999998754321111 0112223456799999998 99999 57888764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=287.36 Aligned_cols=282 Identities=14% Similarity=0.090 Sum_probs=212.2
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
++++|+|||||||||||++|+++|+++|++| .++.+|++|.+.+.++++++++|+|
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 3467899999999999999999999999876 2456799999999999998888999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++|+.....+ ++|++++. |.+
T Consensus 91 ih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~------~~E~~~~~-p~~ 160 (335)
T 1rpn_A 91 YNLAAQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER------QDENTPFY-PRS 160 (335)
T ss_dssp EECCSCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS------BCTTSCCC-CCS
T ss_pred EECcccc---chhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCC------CCcccCCC-CCC
Confidence 9999965 33334567788999999999999999999874 799999999998665545 88988888 999
Q ss_pred hhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH--------HHhhhhhhccccc-cceecCCCCCchHHHHhhhcc
Q 035631 502 FYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL--------LKAYENVCTLRLR-MPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.|+.+|+.+|.+.... ..+..+.+.|+..+++++. ...+...+..+.. ...+|++.+.++|
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~-------- 232 (335)
T 1rpn_A 161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW-------- 232 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC--------
T ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceece--------
Confidence 9999999999885443 3355666666665554321 1111111222222 2345777777888
Q ss_pred cccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccc-cCCchhHhhhhhccCCCCCcC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKW-SNFNLEEQAKVLVAPRSNNHM 649 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 649 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+... .++... ........ ...+
T Consensus 233 ---------i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~ 300 (335)
T 1rpn_A 233 ---------GFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA--FFRPAEVD-VLLG 300 (335)
T ss_dssp ---------EEHHHHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG--GCCSSCCC-BCCB
T ss_pred ---------EEHHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccc--ccCCCcch-hhcC
Confidence 9999999999999988767899999999999999999999999975321 111111 00001112 5678
Q ss_pred Cchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 650 DVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 650 d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
|++|+ .++|.+..+++++|+++++++.+..
T Consensus 301 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 332 (335)
T 1rpn_A 301 NPAKAQRVLGWKPRTSLDELIRMMVEADLRRV 332 (335)
T ss_dssp CTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Confidence 99999 3678777799999999998876643
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=287.68 Aligned_cols=275 Identities=14% Similarity=0.161 Sum_probs=209.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|||||||||||||++|+++|+++|++| .++.+|++|.+ +.+.+++ |+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~---d~vih~A~~~--- 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG---DVVFHFAANP--- 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC---SEEEECCSSC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC---CEEEECCCCC---
Confidence 699999999999999999999999987 34678888888 7666654 9999999965
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
....+..++...+++|+.++.+++++|++.++ ++||+||+++|+.....+ ++|+++.. |.+.|+.+|..+|.
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~------~~e~~~~~-p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIP------TPEEEPYK-PISVYGAAKAAGEV 146 (312)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS------BCTTSCCC-CCSHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCC------CCCCCCCC-CCChHHHHHHHHHH
Confidence 45566788889999999999999999999887 699999999999766555 88888887 99999999999998
Q ss_pred hhhH--HhhhhhhhhhhhhhhhHHHH----HHhhhhhhccc-cccceecCCCCCchHHHHhhhcccccccCCCccchhhH
Q 035631 513 LSYL--EIFVLVICIECLINFQVEGL----LKAYENVCTLR-LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEM 585 (684)
Q Consensus 513 ~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 585 (684)
+... ...+.++.+.|+.++++++. ...+...+... ..+.++|++.+.++| +|++|+
T Consensus 147 ~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------------i~v~Dv 209 (312)
T 3ko8_A 147 MCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSY-----------------LYVRDA 209 (312)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECE-----------------EEHHHH
T ss_pred HHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEee-----------------EEHHHH
Confidence 8544 33466777788877765542 22222222222 334566777777888 999999
Q ss_pred HHHHHHHHhc---C--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhh-hhccCCCCCcCCchhh--hhc
Q 035631 586 LPIAIEMARR---N--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAK-VLVAPRSNNHMDVTKL--KKE 657 (684)
Q Consensus 586 ~~~~~~~~~~---~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~kl--~~~ 657 (684)
|++++.++++ . .+++||+++++.+|+.|+++.+.+.+|.+..+...+...... ...... ...+|++|+ .++
T Consensus 210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG 288 (312)
T 3ko8_A 210 VEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVK-YMTLAVTKLMKLTG 288 (312)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCS-EECBCCHHHHHHHC
T ss_pred HHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCcc-ccccCHHHHHHHhC
Confidence 9999999987 2 466999999999999999999999999765554433221110 011122 567899999 457
Q ss_pred CCCchhHHHHHHHHHhhcccc
Q 035631 658 FPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 658 ~~~~~~~~~~l~~~~~~~~~~ 678 (684)
|.+..+++++|+++++++.++
T Consensus 289 ~~p~~~~~~~l~~~~~~~~~~ 309 (312)
T 3ko8_A 289 WRPTMTSAEAVKKTAEDLAKE 309 (312)
T ss_dssp CCCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhh
Confidence 878889999999999887653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=280.85 Aligned_cols=275 Identities=18% Similarity=0.171 Sum_probs=206.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeee---eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHh
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFG---TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETI 446 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~---~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 446 (684)
..|+|||||||||||++|+++|+++|++|..+ .+|++|.+.+.++++..++|+|||+|+.. ....+..++...+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~ 87 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAY 87 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccC---CHHHHhcCHHHHH
Confidence 34799999999999999999999999999765 47999999999999865679999999965 3334456788999
Q ss_pred hhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhh
Q 035631 447 RTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIE 526 (684)
Q Consensus 447 ~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 526 (684)
++|+.++.+++++|.+.++++||+||.++|+.....+ ++|++++. |.+.|+.+|..+|.+...... ...+.
T Consensus 88 ~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~E~~~~~~~~--~~~~l 158 (292)
T 1vl0_A 88 KINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP------ITEFDEVN-PQSAYGKTKLEGENFVKALNP--KYYIV 158 (292)
T ss_dssp HHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC------BCTTSCCC-CCSHHHHHHHHHHHHHHHHCS--SEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCC------CCCCCCCC-CccHHHHHHHHHHHHHHhhCC--CeEEE
Confidence 9999999999999999888999999999998665445 88998887 999999999999987654322 35556
Q ss_pred hhhhhhHHH--HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEec
Q 035631 527 CLINFQVEG--LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFT 604 (684)
Q Consensus 527 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~ 604 (684)
|+..+++.+ +...+......+..+.+.| .+.++| +|++|+|++++.+++++.+++||++
T Consensus 159 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------i~v~Dva~~~~~~~~~~~~~~~~i~ 219 (292)
T 1vl0_A 159 RTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTP-----------------TSTVDLARVVLKVIDEKNYGTFHCT 219 (292)
T ss_dssp EECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECC-----------------EEHHHHHHHHHHHHHHTCCEEEECC
T ss_pred eeeeeeCCCcChHHHHHHHHhcCCcEEeec--CeeeCC-----------------ccHHHHHHHHHHHHhcCCCcEEEec
Confidence 666554321 1111111111122222222 234455 9999999999999987666799999
Q ss_pred CCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-hcCCCchhHHHHHHHHHhhccc
Q 035631 605 NPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-KEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 605 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+++.+|+.|+++.+.+.+|.+..+.+++.........++. ...+|++|+ + ++|.+. +++++|+++++++.+
T Consensus 220 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 220 CKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPK-YSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp CBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCS-BCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCc-cccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence 9999999999999999999765443333222111112233 678999999 3 577666 999999999988753
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=285.43 Aligned_cols=273 Identities=15% Similarity=0.148 Sum_probs=206.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee-------eeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF-------GTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVE 444 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~-------~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 444 (684)
|||||||||||||++|+++|+ +|++|.. +.+|++|.+.+.+++++.++|+|||+|+.. ....+..++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~~~~~~~~~~~ 76 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPEL 76 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccC---CHhhhhcCHHH
Confidence 699999999999999999999 8999843 458999999999999986679999999965 33345677889
Q ss_pred HhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhh
Q 035631 445 TIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVIC 524 (684)
Q Consensus 445 ~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~ 524 (684)
.+++|+.++.+++++|++.++++||+||.++|+.....+ ++|++++. |.+.|+.+|..+|.+...... ++.
T Consensus 77 ~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~~~~~~~~--~~~ 147 (299)
T 1n2s_A 77 AQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP------WQETDATS-PLNVYGKTKLAGEKALQDNCP--KHL 147 (299)
T ss_dssp HHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC------BCTTSCCC-CSSHHHHHHHHHHHHHHHHCS--SEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCC------CCCCCCCC-CccHHHHHHHHHHHHHHHhCC--CeE
Confidence 999999999999999999888999999999998765545 88988887 999999999999987654332 566
Q ss_pred hhhhhhhhHHH---HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-----
Q 035631 525 IECLINFQVEG---LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----- 596 (684)
Q Consensus 525 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----- 596 (684)
+.|+..+++.+ +...+...+..+..+.+.|+ +.++| +|++|+|++++.+++++
T Consensus 148 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------i~v~Dva~~~~~~~~~~~~~~~ 208 (299)
T 1n2s_A 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIND--QYGAP-----------------TGAELLADCTAHAIRVALNKPE 208 (299)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECS--CEECC-----------------EEHHHHHHHHHHHHHHHHHCGG
T ss_pred EEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecC--cccCC-----------------eeHHHHHHHHHHHHHHhccccc
Confidence 67776655432 22222222222222333333 44566 99999999999999865
Q ss_pred ccceeEecCCCcccHHHHHHHHHhhcCCcc------cccCCchhHhhhhhccCCCCCcCCchhh-h-hcCCCchhHHHHH
Q 035631 597 CRGAWNFTNPGVISHNEILELYKEYIDPQL------KWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-KEFPEVLSIKDSI 668 (684)
Q Consensus 597 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~~~~~~~~~~~~l 668 (684)
.+++||+++++.+|+.|+++.+.+.+|.+. .+.+.+....+....++. ...+|++|+ + ++|.+. +|+++|
T Consensus 209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG~~p~-~~~~~l 286 (299)
T 1n2s_A 209 VAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPG-NSRLNTEKFQRNFDLILP-QWELGV 286 (299)
T ss_dssp GCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCS-BCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred cCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCC-ceeeeHHHHHHhcCCCCC-CHHHHH
Confidence 267999999999999999999999998542 222222111111112233 678999999 3 578765 899999
Q ss_pred HHHHhhcccc
Q 035631 669 IKYVLEPNKK 678 (684)
Q Consensus 669 ~~~~~~~~~~ 678 (684)
+++++++.+.
T Consensus 287 ~~~~~~~~~~ 296 (299)
T 1n2s_A 287 KRMLTEMFTT 296 (299)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhc
Confidence 9999887654
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=285.51 Aligned_cols=277 Identities=18% Similarity=0.184 Sum_probs=209.2
Q ss_pred ccCCceEEEEEcCCcchhHHHHHHHHhcCCeE------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 367 CGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 367 ~~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
..+.+|+|||||||||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+|||+|+...
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~A~~~~--- 89 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGV--SAVLHLGAFMS--- 89 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTC--SEEEECCCCCC---
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCC--CEEEECCcccC---
Confidence 34455799999999999999999999999987 34678999999999999966 99999999652
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeec--CCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEY--DSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~--~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
.........+++|+.++.+++++|++.++ ++||+||++||+. ....+ ++|+++.. |.+.|+.+|.++|
T Consensus 90 --~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~E 160 (347)
T 4id9_A 90 --WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLP------VTEDHPLC-PNSPYGLTKLLGE 160 (347)
T ss_dssp --SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSS------BCTTSCCC-CCSHHHHHHHHHH
T ss_pred --cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCC------cCCCCCCC-CCChHHHHHHHHH
Confidence 22334478999999999999999999887 6999999999986 33333 89999888 9999999999999
Q ss_pred hhhhH--Hhhhhhhhhhhhhhhh-------------HHHH----------------HHhhhhhhccccccceecCCCCCc
Q 035631 512 FLSYL--EIFVLVICIECLINFQ-------------VEGL----------------LKAYENVCTLRLRMPISSDLSNPR 560 (684)
Q Consensus 512 ~~~~~--~~~~~~~~~~~~~~~~-------------~~~~----------------~~~~~~~~~~~~~~~~~g~~~~~~ 560 (684)
.+... ...+.++.+.|+..++ +++. ...+......+.++.++|++.+.+
T Consensus 161 ~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (347)
T 4id9_A 161 ELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGR 240 (347)
T ss_dssp HHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCC
T ss_pred HHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCccc
Confidence 88544 3446677788887776 4442 111222223333344445544433
Q ss_pred hHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhh
Q 035631 561 NFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAK 638 (684)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 638 (684)
+| ..+++|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+.....++..
T Consensus 241 ~~-------------~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~---- 303 (347)
T 4id9_A 241 PF-------------RMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGD---- 303 (347)
T ss_dssp BC-------------EECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSC----
T ss_pred CC-------------ccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCc----
Confidence 32 012399999999999999987 36799999999999999999999999976555432221
Q ss_pred hhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 639 VLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 639 ~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+. ...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 304 ----~~-~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 304 ----GV-YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp ----CC-BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ----cc-ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 12 567899999 3678887899999999998876543
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=298.03 Aligned_cols=283 Identities=17% Similarity=0.138 Sum_probs=209.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+|+|||||||||||++|++.|+++ |++|++++|+... .+.+.+|+.+. +..++ .++|+||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~--------------~~~v~~d~~~~--~~~~l--~~~D~Vi 206 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK--------------PGKRFWDPLNP--ASDLL--DGADVLV 206 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC--------------TTCEECCTTSC--CTTTT--TTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC--------------ccceeecccch--hHHhc--CCCCEEE
Confidence 689999999999999999999999 8999999997521 12256777643 34445 6899999
Q ss_pred EcCccCCcC-CCCCChHHHHHHHHHHHHHHHHH-HHhcCCCcEEEEEeCcccccC-CCCCCCCCCCCCCCCCCCChhHHH
Q 035631 92 HFAAQTHVD-NSFGNSFEFTNNNIYGTHVLLEA-CKLTGQVKRFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 92 h~a~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~-~~~~~~~~~~i~~SS~~vyg~-~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
|+|+..... ....++...+++|+.++.+|+++ ++..+ +++|||+||+++||. .... +.+|..+. +.+.|+.+
T Consensus 207 h~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~---~~~E~~~~-~~~~y~~~ 281 (516)
T 3oh8_A 207 HLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDE---ILTEESES-GDDFLAEV 281 (516)
T ss_dssp ECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEE---EECTTSCC-CSSHHHHH
T ss_pred ECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCC---ccCCCCCC-CcChHHHH
Confidence 999976432 23345677899999999999999 45544 899999999999983 3221 23555555 78899999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|...|..+.. ....+++++++||++|||++. .+++.+...+..+.. ..++++++.++|+|++|+|++++.+++++
T Consensus 282 ~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~---~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 356 (516)
T 3oh8_A 282 CRDWEHATAP-ASDAGKRVAFIRTGVALSGRG---GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDA 356 (516)
T ss_dssp HHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB---SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC---ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence 9999988754 455699999999999999974 566666655554443 34588889999999999999999999987
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CC--------CCcceecCHHHHHhcCCcccCC-HHHHH
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PF--------NDHRYFLDDQKLKRLGWKEKTP-WEEGL 318 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~--------~~~~~~~d~~k~~~lg~~p~~~-~~e~i 318 (684)
..+++||+++++.+|+.|+++.+.+.+|.+....+...... .. ......++++|+++|||+|+++ ++++|
T Consensus 357 ~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l 436 (516)
T 3oh8_A 357 QISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAI 436 (516)
T ss_dssp TCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHH
T ss_pred ccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHH
Confidence 77789999999999999999999999987543222111000 00 1123457889999999999987 99999
Q ss_pred HHHHHH
Q 035631 319 KLTLEW 324 (684)
Q Consensus 319 ~~~i~~ 324 (684)
+++++.
T Consensus 437 ~~~l~~ 442 (516)
T 3oh8_A 437 AHELGY 442 (516)
T ss_dssp HHHHTC
T ss_pred HHHhCc
Confidence 998864
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=280.53 Aligned_cols=258 Identities=12% Similarity=0.071 Sum_probs=200.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE--------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNV 435 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 435 (684)
++|+||||| +||||++|+++|+++|++| .++.+|++|.+.+.+++++ ++|+|||+|+..
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~----- 74 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAAS----- 74 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHH-----
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCC-----
Confidence 457999999 6999999999999999987 4567899999999888876 459999999954
Q ss_pred cccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 436 DWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 436 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
..++...+++|+.++.+++++|++.++ ++||+||++|||.....+ ++|+++.. |.+.|+.+|..+|.+
T Consensus 75 ---~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~~- 143 (286)
T 3gpi_A 75 ---EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEW------LDEDTPPI-AKDFSGKRMLEAEAL- 143 (286)
T ss_dssp ---HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSE------ECTTSCCC-CCSHHHHHHHHHHHH-
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCC------CCCCCCCC-CCChhhHHHHHHHHH-
Confidence 256678899999999999999998886 699999999999766555 89999988 999999999999988
Q ss_pred hHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHh
Q 035631 515 YLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMAR 594 (684)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~ 594 (684)
... .++.+.|+..+++.+....+... .. . ...+++...++| +|++|+|++++.+++
T Consensus 144 ~~~---~~~~ilR~~~v~G~~~~~~~~~~-~~--~-~~~~~~~~~~~~-----------------i~v~Dva~~~~~~~~ 199 (286)
T 3gpi_A 144 LAA---YSSTILRFSGIYGPGRLRMIRQA-QT--P-EQWPARNAWTNR-----------------IHRDDGAAFIAYLIQ 199 (286)
T ss_dssp GGG---SSEEEEEECEEEBTTBCHHHHHT-TC--G-GGSCSSBCEECE-----------------EEHHHHHHHHHHHHH
T ss_pred Hhc---CCeEEEecccccCCCchhHHHHH-Hh--c-ccCCCcCceeEE-----------------EEHHHHHHHHHHHHh
Confidence 443 66777777766654432222221 11 1 122555666677 999999999999998
Q ss_pred c---C-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCch-hHHHHH
Q 035631 595 R---N-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVL-SIKDSI 668 (684)
Q Consensus 595 ~---~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~-~~~~~l 668 (684)
+ . .+++||+++++.+|+.|+++.+.+.+|.+..+...+ ..+. ...+|++|+ .++|.+.. +|+++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~~~~-~~~~d~~k~~~lG~~p~~~~l~e~l 270 (286)
T 3gpi_A 200 QRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP--------PVQG-NKKLSNARLLASGYQLIYPDYVSGY 270 (286)
T ss_dssp HHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC--------CBCS-SCEECCHHHHHTTCCCSSCSHHHHH
T ss_pred hhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc--------ccCC-CeEeeHHHHHHcCCCCcCCcHHHHH
Confidence 7 3 567999999999999999999999999765443221 1223 778999999 77787665 799999
Q ss_pred HHHHhhcccc
Q 035631 669 IKYVLEPNKK 678 (684)
Q Consensus 669 ~~~~~~~~~~ 678 (684)
+++++++...
T Consensus 271 ~~~~~~~~~~ 280 (286)
T 3gpi_A 271 GALLAAMREG 280 (286)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHhcc
Confidence 9999887764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=280.14 Aligned_cols=272 Identities=18% Similarity=0.190 Sum_probs=210.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|+||||||+||||++++++|+++|++|. ++.+|++|.+++.++++...+|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~--- 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA--- 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC---
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc---
Confidence 6899999999999999999999999872 3567899999999999866679999999965
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecc-eeeec-CCCCCCCCCCCCccCCCCCCCCChhhhhhHhH
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATG-CIYEY-DSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMV 510 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~-~vy~~-~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~ 510 (684)
....+..++...+++|+.++.+++++|.+.++ ++|++||. .+|+. ....+ ++|++++. |.+.|+.+|..+
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER------AEETWPPR-PKSPYAASKAAF 150 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCC------BCTTSCCC-CCSHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCC------cCCCCCCC-CCChHHHHHHHH
Confidence 23334567778999999999999999999886 79999999 89985 33334 78888877 889999999999
Q ss_pred hhhhhH--HhhhhhhhhhhhhhhhHHHH--------HHhhhhhhcccccccee-----cCCCCCchHHHHhhhccccccc
Q 035631 511 TFLSYL--EIFVLVICIECLINFQVEGL--------LKAYENVCTLRLRMPIS-----SDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 511 E~~~~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
|.+... ...+..+.+.|+.++++++. ...+...+..+.++.++ |++.+.++|
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------------- 217 (311)
T 2p5y_A 151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY------------- 217 (311)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE-------------
T ss_pred HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee-------------
Confidence 988543 33456677777776665431 22222222233344455 677777788
Q ss_pred CCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-
Q 035631 576 PNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL- 654 (684)
Q Consensus 576 ~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl- 654 (684)
+|++|+|++++.+++++ +++||+++++.+|+.|+++.+.+.+|.+..+...+.. ..... ...+|++|+
T Consensus 218 ----i~v~Dva~a~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~-~~~~d~~k~~ 286 (311)
T 2p5y_A 218 ----VYVGDVAEAHALALFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-----PGDLE-RSVLSPLKLM 286 (311)
T ss_dssp ----EEHHHHHHHHHHHHHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-----TTCCS-BCCBCCHHHH
T ss_pred ----EEHHHHHHHHHHHHhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----ccchh-hccCCHHHHH
Confidence 99999999999999875 7799999999999999999999999976544322211 11122 567899999
Q ss_pred hhcCCCchhHHHHHHHHHhhccc
Q 035631 655 KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 655 ~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+++|.+..+++++|+++++++.+
T Consensus 287 ~lg~~p~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 287 AHGWRPKVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp TTTCCCSSCHHHHHHHHHHHHHT
T ss_pred HCCCCCCCCHHHHHHHHHHHHHh
Confidence 55666777999999999987654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=280.95 Aligned_cols=277 Identities=14% Similarity=0.176 Sum_probs=212.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe--------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNV 435 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 435 (684)
++|+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.+++++.++|+|||+|+.. ..
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~ 87 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS---SV 87 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC---CH
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc---ch
Confidence 457999999999999999999999999873 4568999999999999886679999999965 33
Q ss_pred cccccchhhHhhhchhhhHHHHHHHHHc-C-CeEEEEecceeeecC--CCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 436 DWCESHRVETIRTNVMGTLTLADVCKEK-N-VLLMNFATGCIYEYD--SMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 436 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~-~~~i~~SS~~vy~~~--~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
..+..++...+++|+.++.+++++|.+. + .++||+||.++|+.. ...+ ++|+++.. |.+.|+.+|+.+|
T Consensus 88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~E 160 (321)
T 2pk3_A 88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESP------VSEENQLR-PMSPYGVSKASVG 160 (321)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCS------BCTTSCCB-CCSHHHHHHHHHH
T ss_pred hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCC------CCCCCCCC-CCCccHHHHHHHH
Confidence 3445678899999999999999999876 3 479999999999865 3344 88988887 8999999999999
Q ss_pred hhhhHH--hhhhhhhhhhhhhhhHHHH-----HHhhhhhhcc---c--cccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 512 FLSYLE--IFVLVICIECLINFQVEGL-----LKAYENVCTL---R--LRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 512 ~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+.... ..+.++.+.|+.++++++. ...+...+.. + .++.+++++...++|
T Consensus 161 ~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------------- 223 (321)
T 2pk3_A 161 MLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDF----------------- 223 (321)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEE-----------------
T ss_pred HHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEee-----------------
Confidence 885443 3356677777776665442 1222222222 2 234556677777788
Q ss_pred cchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-h
Q 035631 580 TVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-K 656 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~ 656 (684)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+..+...+... ...... ...+|++|+ + +
T Consensus 224 v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~---~~~~~~-~~~~d~~k~~~~l 299 (321)
T 2pk3_A 224 TDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQL---RPSEVP-TLIGSNKRLKDST 299 (321)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGC---CSSCCS-BCCBCCHHHHHHH
T ss_pred EEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccC---CCcccc-hhccCHHHHHHHc
Confidence 99999999999999876 456999999999999999999999999765544332110 001122 678899999 3 5
Q ss_pred cCCCchhHHHHHHHHHhhccc
Q 035631 657 EFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 657 ~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+|.+..+++++|+++++++.+
T Consensus 300 G~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 300 GWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp CCCCCSCHHHHHHHHHHHHHT
T ss_pred CCCcCCCHHHHHHHHHHHHhc
Confidence 787777999999999987653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=282.64 Aligned_cols=278 Identities=14% Similarity=0.090 Sum_probs=212.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeee----eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhH
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFG----TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVET 445 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~----~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 445 (684)
++|+|||||||||||++|+++|+++|++|... .+|++|.+.+.++++..++|+|||+|+... .......++...
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~~~~ 79 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADF 79 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecC--CcchhhhCHHHH
Confidence 45799999999999999999999999998654 369999999999998656699999999651 112345677889
Q ss_pred hhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC----CCCCCC-ChhhhhhHhHhhhhhHH--
Q 035631 446 IRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD----EPNFTR-SFYSKTKAMVTFLSYLE-- 517 (684)
Q Consensus 446 ~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~----~~~~p~-~~Y~~sK~~~E~~~~~~-- 517 (684)
+++|+.++.+++++|.+.++ ++||+||..+|+.....+ ++|++ ++. |. +.|+.+|+.+|.+....
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~-p~~~~Y~~sK~~~E~~~~~~~~ 152 (321)
T 1e6u_A 80 IYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP------MAESELLQGTLE-PTNEPYAIAKIAGIKLCESYNR 152 (321)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS------BCGGGTTSSCCC-GGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCC------cCccccccCCCC-CCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999887 799999999998655555 77876 454 64 58999999999885443
Q ss_pred hhhhhhhhhhhhhhhHHHH---------HHhhhhhhcc----c-cccceecCCCCCchHHHHhhhcccccccCCCccchh
Q 035631 518 IFVLVICIECLINFQVEGL---------LKAYENVCTL----R-LRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLD 583 (684)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 583 (684)
..+..+.+.|+..+++.+. ...+...+.. + .++.+++++...++| +|++
T Consensus 153 ~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------------i~v~ 215 (321)
T 1e6u_A 153 QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF-----------------LHVD 215 (321)
T ss_dssp HHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE-----------------EEHH
T ss_pred HhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEe-----------------EEHH
Confidence 3456777777777665432 1222222221 1 244556777777788 9999
Q ss_pred hHHHHHHHHHhcC-c---------cceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchh
Q 035631 584 EMLPIAIEMARRN-C---------RGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 584 D~~~~~~~~~~~~-~---------~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
|+|++++.+++++ . +++||+++++.+|+.|+++.+.+.+|.+..+...+.. ..... ...+|++|
T Consensus 216 Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~-~~~~d~~k 289 (321)
T 1e6u_A 216 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK-----PDGTP-RKLLDVTR 289 (321)
T ss_dssp HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS-----CCCCS-BCCBCCHH
T ss_pred HHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC-----CCCcc-cccCCHHH
Confidence 9999999999876 2 4799999999999999999999999976544332211 01122 56889999
Q ss_pred h-hhcCCCchhHHHHHHHHHhhccccc
Q 035631 654 L-KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 654 l-~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+ +++|.+..+++++|+++++++.++.
T Consensus 290 ~~~lG~~p~~~~~~~l~~~~~~~~~~~ 316 (321)
T 1e6u_A 290 LHQLGWYHEISLEAGLASTYQWFLENQ 316 (321)
T ss_dssp HHHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHhcCCccCCcHHHHHHHHHHHHHHHH
Confidence 9 6566666799999999999887654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-32 Score=278.78 Aligned_cols=274 Identities=19% Similarity=0.205 Sum_probs=206.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC--CeE------------------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG--IAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g--~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
+.|+||||||+||||++|+++|+++| ++| .++.+|++|.+.+.+++.++ |+|
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~v 79 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKV--DGV 79 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTC--SEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCC--CEE
Confidence 34799999999999999999999997 655 24567999999999998665 999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
||+|+.. ....+..++...+++|+.++.+++++|.+.+. ++||+||.+|||.....+ ++|+++.. |.+
T Consensus 80 ih~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~------~~E~~~~~-~~~ 149 (336)
T 2hun_A 80 VHLAAES---HVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS------FTENDRLM-PSS 149 (336)
T ss_dssp EECCCCC---CHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC------BCTTBCCC-CCS
T ss_pred EECCCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC------cCCCCCCC-CCC
Confidence 9999965 33334567788999999999999999998764 799999999998654444 88888887 889
Q ss_pred hhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 502 FYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
.|+.+|..+|.+... ...+.++.+.|+..+++.+. ...+...+..+..+++++++.+.++|
T Consensus 150 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 217 (336)
T 2hun_A 150 PYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDW------------ 217 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEE------------
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeee------------
Confidence 999999999988544 33456677777777665442 22222233334445666777777888
Q ss_pred cCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchh
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
+|++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.+|.+......... ...... ...+|++|
T Consensus 218 -----i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~-~~~~d~~k 287 (336)
T 2hun_A 218 -----LYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVED----RPGHDL-RYSLDSWK 287 (336)
T ss_dssp -----EEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECC----CTTCCC-CCCBCCHH
T ss_pred -----EEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCC----CCCchh-hhcCCHHH
Confidence 99999999999999876 45599999999999999999999999965321111000 001112 45789999
Q ss_pred h-h-hcCCCchhHHHHHHHHHhhccc
Q 035631 654 L-K-KEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 654 l-~-~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+ + ++|.+..+++++|+++++++.+
T Consensus 288 ~~~~lG~~p~~~~~~~l~~~~~~~~~ 313 (336)
T 2hun_A 288 ITRDLKWRPKYTFDEGIKKTIDWYLK 313 (336)
T ss_dssp HHHHHCCCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 9 3 6787778999999999987654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.98 E-value=6.6e-32 Score=276.84 Aligned_cols=274 Identities=15% Similarity=0.140 Sum_probs=182.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeee----------eccCCChhHHHHHHHhcCCCeEEEcceecCCCCcccccc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFG----------TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCES 440 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~----------~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 440 (684)
.|+|||||||||||++|+++|+++|++|..+ .+|++|.+.+.+++++.++|+|||+|+.. ....+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~ 78 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAER---RPDVVEN 78 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCccc---Chhhhhc
Confidence 4699999999999999999999999998543 38999999999999886779999999966 3334456
Q ss_pred chhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhh
Q 035631 441 HRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFV 520 (684)
Q Consensus 441 ~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 520 (684)
++...+++|+.++.+++++|.+.++++||+||..+|++ ...+ ++|++++. |.+.|+.+|..+|.+.... .
T Consensus 79 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~------~~E~~~~~-~~~~Y~~sK~~~e~~~~~~--~ 148 (315)
T 2ydy_A 79 QPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPP------YREEDIPA-PLNLYGKTKLDGEKAVLEN--N 148 (315)
T ss_dssp ---------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCS------BCTTSCCC-CCSHHHHHHHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCC------CCCCCCCC-CcCHHHHHHHHHHHHHHHh--C
Confidence 78889999999999999999998889999999999986 3334 88988887 8999999999999876543 2
Q ss_pred hhhhhhhhhhhhHHHHH------Hhhhhhhc-cccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 521 LVICIECLINFQVEGLL------KAYENVCT-LRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 521 ~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
..+.+.|+..+++.+.. ..+..... .+..+.+. +.+.++| +|++|+|++++.++
T Consensus 149 ~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------------i~v~Dva~a~~~~~ 209 (315)
T 2ydy_A 149 LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFP-----------------THVKDVATVCRQLA 209 (315)
T ss_dssp TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCC-----------------EEHHHHHHHHHHHH
T ss_pred CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECc-----------------EEHHHHHHHHHHHH
Confidence 34455666655433211 11111111 11111111 2334455 99999999999998
Q ss_pred hcC-----ccceeEecCCCcccHHHHHHHHHhhcCCccc-ccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHH
Q 035631 594 RRN-----CRGAWNFTNPGVISHNEILELYKEYIDPQLK-WSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKD 666 (684)
Q Consensus 594 ~~~-----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~ 666 (684)
++. .+++||+++++.+|+.|+++.+.+.+|.+.. +.+++.. ......++. ...+|++|+ +.+|.+..+|++
T Consensus 210 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~-~~~~d~~k~~~~G~~p~~~~~~ 287 (315)
T 2ydy_A 210 EKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS-PVLGAQRPR-NAQLDCSKLETLGIGQRTPFRI 287 (315)
T ss_dssp HHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC-CCSSSCCCS-BCCBCCHHHHHTTCCCCCCHHH
T ss_pred HhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccc-cccccCCCc-ccccchHHHHhcCCCCCCCHHH
Confidence 752 5679999999999999999999999997543 2222210 000112334 678899999 557777788999
Q ss_pred HHHHHHhhcccc
Q 035631 667 SIIKYVLEPNKK 678 (684)
Q Consensus 667 ~l~~~~~~~~~~ 678 (684)
+|+++++++.++
T Consensus 288 ~l~~~~~~~~~~ 299 (315)
T 2ydy_A 288 GIKESLWPFLID 299 (315)
T ss_dssp HHHHHHGGGCC-
T ss_pred HHHHHHHHHccc
Confidence 999999988765
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-32 Score=279.18 Aligned_cols=276 Identities=19% Similarity=0.152 Sum_probs=207.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
||+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.++++..++|+|||+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~-- 78 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS-- 78 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc--
Confidence 36999999999999999999999999772 4568999999999999844559999999965
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
....+..++...+++|+.++.+++++|++.++ ++||+||.++|+.....+ ++|++++. |.+.|+.+|..+|
T Consensus 79 -~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~e 150 (330)
T 2c20_A 79 -LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDL------ITEETMTN-PTNTYGETKLAIE 150 (330)
T ss_dssp -CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSS------BCTTSCCC-CSSHHHHHHHHHH
T ss_pred -CccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCC------CCcCCCCC-CCChHHHHHHHHH
Confidence 22234467788999999999999999999887 699999999998655444 88998887 8999999999999
Q ss_pred hhhhHH--hhhhhhhhhhhhhhhHHHH--------------HHhhhhhhc-cccccceec------CCCCCchHHHHhhh
Q 035631 512 FLSYLE--IFVLVICIECLINFQVEGL--------------LKAYENVCT-LRLRMPISS------DLSNPRNFVTKLAR 568 (684)
Q Consensus 512 ~~~~~~--~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~~~~~~~~g------~~~~~~~~~~~~~~ 568 (684)
.+.... ..+.++.+.|+.++++.+. ...+..... ....+.++| ++.+.++|
T Consensus 151 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~------ 224 (330)
T 2c20_A 151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY------ 224 (330)
T ss_dssp HHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE------
T ss_pred HHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee------
Confidence 885443 3356677777776654421 111111111 111233444 45555666
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPR 644 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 644 (684)
+|++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.+|.+......+.. ...+.
T Consensus 225 -----------v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~ 288 (330)
T 2c20_A 225 -----------IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR-----AGDPA 288 (330)
T ss_dssp -----------EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC-----SSCCS
T ss_pred -----------EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----CCccc
Confidence 99999999999999764 25799999999999999999999999976443322111 11122
Q ss_pred CCCcCCchhh--hhcCCCch-hHHHHHHHHHhhccccc
Q 035631 645 SNNHMDVTKL--KKEFPEVL-SIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 645 ~~~~~d~~kl--~~~~~~~~-~~~~~l~~~~~~~~~~~ 679 (684)
...+|++|+ .++|.+.. +++++|+++++++.++.
T Consensus 289 -~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~ 325 (330)
T 2c20_A 289 -RLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP 325 (330)
T ss_dssp -EECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred -ccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence 567899999 46787665 99999999998876543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=278.91 Aligned_cols=280 Identities=15% Similarity=0.153 Sum_probs=210.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhc--CCeEe-----------------------eeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDK--GIAFE-----------------------FGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~--g~~v~-----------------------~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
||+||||||+||||++|+++|+++ |++|. ++.+|++|.+.+.++++++ |+|||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih 81 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIVH 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcC--CEEEE
Confidence 469999999999999999999999 77662 3557999999999999988 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCC-C-----CCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSM-H-----PQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~-~-----~~~~~~~~~e~~~~~~p 499 (684)
+|+.. ....+..++...+++|+.++.+++++|.+.++++||+||.+|||.... . ...+..+++|+++.. |
T Consensus 82 ~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~-~ 157 (348)
T 1oc2_A 82 YAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN-P 157 (348)
T ss_dssp CCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC-C
T ss_pred CCccc---CccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCCC-C
Confidence 99965 333345677889999999999999999998889999999999985432 0 001123488988887 8
Q ss_pred CChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 500 RSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
.+.|+.+|+.+|.+.... ..+.++.+.|+..+++.+. ...+...+..+.++.+++++.+.++|
T Consensus 158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 227 (348)
T 1oc2_A 158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDW---------- 227 (348)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEEC----------
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEee----------
Confidence 999999999999885443 3456667777776665432 22222223333345566777777788
Q ss_pred cccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCc
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 651 (684)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+......... ...... ...+|+
T Consensus 228 -------i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~-~~~~d~ 295 (348)
T 1oc2_A 228 -------IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAGHDL-RYAIDA 295 (348)
T ss_dssp -------EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTTCCC-BCCBCC
T ss_pred -------EEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCC----CCCccc-ccccCH
Confidence 99999999999999876 45599999999999999999999999865321111000 001112 456899
Q ss_pred hhh--hhcCCCchh-HHHHHHHHHhhcccc
Q 035631 652 TKL--KKEFPEVLS-IKDSIIKYVLEPNKK 678 (684)
Q Consensus 652 ~kl--~~~~~~~~~-~~~~l~~~~~~~~~~ 678 (684)
+|+ .++|.+..+ ++++|+++++++.++
T Consensus 296 ~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 296 SKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp HHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 999 367877666 999999999877543
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=271.96 Aligned_cols=274 Identities=12% Similarity=0.082 Sum_probs=204.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCC-----ChhHHHHHHHhcCCCeEEEcceecC-CCCccccccchhhH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE-----DKNSLLDDMKRVRPTHVLNAAGITG-RPNVDWCESHRVET 445 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~-----d~~~~~~~~~~~~~d~Vih~a~~~~-~~~~~~~~~~~~~~ 445 (684)
|||||||||||||++|+++|+++||+|..+..+-. ..+...+.+.+ +|+|||+|+... .+...|+......+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~--~d~vihla~~~i~~~~~~~~~~~~~~~ 78 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPS--CDAAVNLAGENILNPLRRWNETFQKEV 78 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCS--CSEEEECCCCCSSCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccC--CCEEEEeccCcccchhhhhhhhhhhhh
Confidence 79999999999999999999999999977655422 11122233444 499999998541 11223556677789
Q ss_pred hhhchhhhHHHHHHHHHcCC---eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhh
Q 035631 446 IRTNVMGTLTLADVCKEKNV---LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLV 522 (684)
Q Consensus 446 ~~~nv~~~~~ll~~~~~~~~---~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 522 (684)
+++|+.+|.+|+++++..+. ++|+.||+++||.....+ ++|+++.. |.+.|+..|...|...+....+..
T Consensus 79 ~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~------~~E~~p~~-~~~~~~~~~~~~e~~~~~~~~~~~ 151 (298)
T 4b4o_A 79 LGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAE------YDEDSPGG-DFDFFSNLVTKWEAAARLPGDSTR 151 (298)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCC------BCTTCCCS-CSSHHHHHHHHHHHHHCCSSSSSE
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCc------ccccCCcc-ccchhHHHHHHHHHHHHhhccCCc
Confidence 99999999999999998765 389999999999766665 88888887 889999999998876655556666
Q ss_pred hhhhhhhhhhHHH--HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccc
Q 035631 523 ICIECLINFQVEG--LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRG 599 (684)
Q Consensus 523 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g 599 (684)
+.+.|+..+++.+ ....+......+ ....+|++.+.++| ||++|+|++++.+++++ ..|
T Consensus 152 ~~~~r~~~v~g~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~-----------------ihv~Dva~a~~~~~~~~~~~g 213 (298)
T 4b4o_A 152 QVVVRSGVVLGRGGGAMGHMLLPFRLG-LGGPIGSGHQFFPW-----------------IHIGDLAGILTHALEANHVHG 213 (298)
T ss_dssp EEEEEECEEECTTSHHHHHHHHHHHTT-CCCCBTTSCSBCCE-----------------EEHHHHHHHHHHHHHCTTCCE
T ss_pred eeeeeeeeEEcCCCCchhHHHHHHhcC-CcceecccCceeec-----------------CcHHHHHHHHHHHHhCCCCCC
Confidence 7777777665443 222222222222 23456888888899 99999999999999887 678
Q ss_pred eeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH--------hhhhhccCCCCCcCCchhh-hhcCC-CchhHHHHHH
Q 035631 600 AWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE--------QAKVLVAPRSNNHMDVTKL-KKEFP-EVLSIKDSII 669 (684)
Q Consensus 600 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~~kl-~~~~~-~~~~~~~~l~ 669 (684)
+||+++++++|++|+++.+++.+|++.. .+++... ...... .+..+++.|| +++|. ..++++++|+
T Consensus 214 ~yn~~~~~~~t~~e~~~~ia~~lgrp~~-~pvP~~~~~~~~g~~~~~~~l---~~~rv~~~kl~~~Gf~f~yp~l~~al~ 289 (298)
T 4b4o_A 214 VLNGVAPSSATNAEFAQTFGAALGRRAF-IPLPSAVVQAVFGRQRAIMLL---EGQKVIPRRTLATGYQYSFPELGAALK 289 (298)
T ss_dssp EEEESCSCCCBHHHHHHHHHHHHTCCCC-CCBCHHHHHHHHCHHHHHHHH---CCCCBCCHHHHHTTCCCSCCSHHHHHH
T ss_pred eEEEECCCccCHHHHHHHHHHHhCcCCc-ccCCHHHHHHHhcchhHHHhh---CCCEEcHHHHHHCCCCCCCCCHHHHHH
Confidence 9999999999999999999999997643 2344321 111111 2556789999 88888 5689999999
Q ss_pred HHHhhcc
Q 035631 670 KYVLEPN 676 (684)
Q Consensus 670 ~~~~~~~ 676 (684)
+.++++.
T Consensus 290 ~l~~~ly 296 (298)
T 4b4o_A 290 EIAENLY 296 (298)
T ss_dssp HHHHCC-
T ss_pred HHHHhhc
Confidence 9998764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=280.65 Aligned_cols=280 Identities=20% Similarity=0.172 Sum_probs=208.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------eeeccCCChhHHHHHHHhcCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------FGTGRLEDKNSLLDDMKRVRP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------~~~~d~~d~~~~~~~~~~~~~ 420 (684)
||+||||||+||||++|+++|+++|++|. ++.+|++|.+++.++++++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 36899999999999999999999998762 345789999999999998888
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC----eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV----LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
|+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++|+.....+ ++|+++.
T Consensus 104 d~vih~A~~~---~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~------~~E~~~~ 174 (375)
T 1t2a_A 104 TEIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP------QKETTPF 174 (375)
T ss_dssp SEEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS------BCTTSCC
T ss_pred CEEEECCCcc---cccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCC------CCccCCC
Confidence 9999999965 33334567788999999999999999999875 799999999998655445 8898888
Q ss_pred CCCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH--------HHhhhhhhcccc-ccceecCCCCCchHHHH
Q 035631 497 NFTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL--------LKAYENVCTLRL-RMPISSDLSNPRNFVTK 565 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 565 (684)
. |.+.|+.+|+.+|.+.... ..+..+.+.|+..+++++. ...+...+..+. ....+|++.+.++|
T Consensus 175 ~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~--- 250 (375)
T 1t2a_A 175 Y-PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW--- 250 (375)
T ss_dssp C-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC---
T ss_pred C-CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee---
Confidence 7 8899999999999885443 3345555555554443221 111111111121 12345677777788
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccC--Cchh---------
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSN--FNLE--------- 634 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~--------- 634 (684)
+|++|+|++++.+++++..++||+++++.+|+.|+++.+.+.+|.+..+.. ++..
T Consensus 251 --------------i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~ 316 (375)
T 1t2a_A 251 --------------GHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKV 316 (375)
T ss_dssp --------------EEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCE
T ss_pred --------------EEHHHHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence 999999999999998876789999999999999999999999997643220 1000
Q ss_pred --HhhhhhccC--CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 635 --EQAKVLVAP--RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 635 --~~~~~~~~~--~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.......++ .....+|++|+ .++|.+..+++++|+++++++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 365 (375)
T 1t2a_A 317 HVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE 365 (375)
T ss_dssp EEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred eeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHH
Confidence 000111111 12457899999 36787777999999999987765
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=276.14 Aligned_cols=273 Identities=18% Similarity=0.169 Sum_probs=210.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCC----------------ChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE----------------DKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~----------------d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
++|+|||||||||||++|+++|+++|++|..+..+-. ..+.+..-+. ++|+|||+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~d~vi~~a~~~--- 80 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--DVRLVYHLASHK--- 80 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--TEEEEEECCCCC---
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--cCCEEEECCccC---
Confidence 4579999999999999999999999999966654322 0111111122 459999999976
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
.......++...++ |+.++.+++++|++.++ ++||+||.+||+.....+ ++|+++.. |.+.|+.+|..+|.
T Consensus 81 ~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~------~~E~~~~~-p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 81 SVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLP------TPEDSPLS-PRSPYAASKVGLEM 152 (321)
T ss_dssp CHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS------BCTTSCCC-CCSHHHHHHHHHHH
T ss_pred ChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCC------CCCCCCCC-CCChhHHHHHHHHH
Confidence 34445667777888 99999999999999986 699999999999766555 89999888 99999999999998
Q ss_pred hhhHH--hhhh-hhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhh
Q 035631 513 LSYLE--IFVL-VICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDE 584 (684)
Q Consensus 513 ~~~~~--~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 584 (684)
+.... ..+. ++.+.|+..+++.+ ....+...+..+.++.++|++...++| +|++|
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------v~v~D 215 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDF-----------------TYITD 215 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECE-----------------EEHHH
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEce-----------------EEHHH
Confidence 85443 3455 77778887776554 233444444445556677888888888 99999
Q ss_pred HHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-hcCCC-c
Q 035631 585 MLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-KEFPE-V 661 (684)
Q Consensus 585 ~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~~~~~-~ 661 (684)
+|++++.+++++..|+||+++++.+|+.|+++.+. .+|.+..+...+.. ..... ...+|++|+ + ++|.+ .
T Consensus 216 va~~~~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~-----~~~~~-~~~~d~~k~~~~lG~~p~~ 288 (321)
T 3vps_A 216 VVDKLVALANRPLPSVVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR-----PNEIT-EFRADTALQTRQIGERSGG 288 (321)
T ss_dssp HHHHHHHGGGSCCCSEEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC-----TTCCS-BCCBCCHHHHHHHCCCSCC
T ss_pred HHHHHHHHHhcCCCCeEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC-----CCCcc-eeeccHHHHHHHhCCCCCc
Confidence 99999999998855799999999999999999999 99977655433221 11223 678899999 3 68888 8
Q ss_pred hhHHHHHHHHHhhccccc
Q 035631 662 LSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 662 ~~~~~~l~~~~~~~~~~~ 679 (684)
.+++++|+++++++.+..
T Consensus 289 ~~~~~~l~~~~~~~~~~~ 306 (321)
T 3vps_A 289 IGIEEGIRLTLEWWQSRD 306 (321)
T ss_dssp CCHHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 999999999999877653
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=277.98 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=206.1
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEee-------------------------------eeccCCChhHHHHHHHhc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEF-------------------------------GTGRLEDKNSLLDDMKRV 418 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~-------------------------------~~~d~~d~~~~~~~~~~~ 418 (684)
|+|+|||||||||||++|+++|+++|++|.. +.+|++|.+++.++++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 3479999999999999999999999987633 456889999999999855
Q ss_pred CCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 419 RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
++|+|||+|+.. ....+..++...+++|+.++.+++++|++.++ ++||+||.++|+.....+ ++|++++.
T Consensus 81 ~~d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~------~~E~~~~~ 151 (348)
T 1ek6_A 81 SFMAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP------LDEAHPTG 151 (348)
T ss_dssp CEEEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS------BCTTSCCC
T ss_pred CCCEEEECCCCc---CccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCC------cCCCCCCC
Confidence 569999999965 22334467778999999999999999999886 699999999998655445 88888877
Q ss_pred CC-CChhhhhhHhHhhhhhHHhh-h--hhhhhhhhhhhhHHH---------------HHHhhhhhhc-cccccceec---
Q 035631 498 FT-RSFYSKTKAMVTFLSYLEIF-V--LVICIECLINFQVEG---------------LLKAYENVCT-LRLRMPISS--- 554 (684)
Q Consensus 498 ~p-~~~Y~~sK~~~E~~~~~~~~-~--~~~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~g--- 554 (684)
| .+.|+.+|+.+|.+...... + .++.+.|+.++++.+ +...+..... ....+.++|
T Consensus 152 -p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (348)
T 1ek6_A 152 -GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY 230 (348)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred -CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence 7 88999999999988544322 3 566677776555432 1111222111 222234444
Q ss_pred ---CCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---cc-ceeEecCCCcccHHHHHHHHHhhcCCccc
Q 035631 555 ---DLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CR-GAWNFTNPGVISHNEILELYKEYIDPQLK 627 (684)
Q Consensus 555 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~-g~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 627 (684)
++.+.++| +|++|+|++++.++++. .+ ++||+++++.+|+.|+++.+.+.+|.+..
T Consensus 231 ~~~~g~~~~~~-----------------i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 293 (348)
T 1ek6_A 231 DTEDGTGVRDY-----------------IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293 (348)
T ss_dssp SSSSSSCEECE-----------------EEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred cCCCCceEEee-----------------EEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence 44555666 99999999999999764 33 59999999999999999999999997644
Q ss_pred ccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 628 WSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
....+.. ...+. ...+|++|+ .++|.+..+++++|+++++++.++
T Consensus 294 ~~~~~~~-----~~~~~-~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 340 (348)
T 1ek6_A 294 YKVVARR-----EGDVA-ACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (348)
T ss_dssp EEEECCC-----TTCCS-EECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred eeeCCCC-----Cccch-hhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 3322111 01122 567899999 357777778999999999887654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=278.14 Aligned_cols=276 Identities=15% Similarity=0.111 Sum_probs=210.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------eeeccCCChhHHHHHHHhcCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------FGTGRLEDKNSLLDDMKRVRP 420 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~d~~d~~~~~~~~~~~~~ 420 (684)
++|+|||||||||||++|+++|+++|++|. ++.+|++|.+++.++++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV-- 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC--
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC--
Confidence 346999999999999999999999998762 3557899999999999865
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
|+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++|+.....+ ++|++++. |
T Consensus 104 d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~------~~E~~~~~-~ 173 (352)
T 1sb8_A 104 DYVLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP------KVEDTIGK-P 173 (352)
T ss_dssp SEEEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS------BCTTCCCC-C
T ss_pred CEEEECCccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCC------CCCCCCCC-C
Confidence 9999999965 22234467788999999999999999999887 699999999998665545 88888887 9
Q ss_pred CChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH---------HHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 500 RSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL---------LKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.+.|+.+|+.+|.+... ...+.++.+.|+..+++++. ...+...+..+.++.++|++.+.++|
T Consensus 174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~------ 247 (352)
T 1sb8_A 174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF------ 247 (352)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC------
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEee------
Confidence 99999999999988543 33456677777776665432 12222223333445556777777777
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCCcccHHHHHHHHHhhc---CCcccccCCchhHhhhhhcc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVISHNEILELYKEYI---DPQLKWSNFNLEEQAKVLVA 642 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~ 642 (684)
+|++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.+ |.+....+.... .....
T Consensus 248 -----------i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~---~~~~~ 313 (352)
T 1sb8_A 248 -----------CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRD---FREGD 313 (352)
T ss_dssp -----------EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEEC---CCTTC
T ss_pred -----------EEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecC---CCccc
Confidence 99999999999998762 46799999999999999999999999 865442211000 00011
Q ss_pred CCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 643 PRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 643 ~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.. ...+|++|+ .++|.+..+++++|+++++++.++
T Consensus 314 ~~-~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 314 VR-HSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp CS-BCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred hh-hccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 22 567899999 357777779999999999887653
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=281.93 Aligned_cols=275 Identities=16% Similarity=0.151 Sum_probs=201.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC-CeE--------------------eeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG-IAF--------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g-~~v--------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
.+|+|||||||||||++|+++|+++| ++| .++.+|++|.+.+.++++++ |+|||+|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~--d~Vih~A~ 108 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY--DYVFHLAT 108 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC--SEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC--CEEEECCC
Confidence 34799999999999999999999999 876 24567899999998888755 99999999
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCCCCCCCCCCCCc--cCC---CC-CCCC
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDSMHPQGSSIGFK--EDD---EP-NFTR 500 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~--e~~---~~-~~p~ 500 (684)
.. ....+..++...+++|+.++.+++++|++. ++ ++||+||.+||+.....+ ++ |++ +. . |.
T Consensus 109 ~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~------~~~~E~~~~~~~~~-~~ 178 (377)
T 2q1s_A 109 YH---GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDD------AKATEETDIVSLHN-ND 178 (377)
T ss_dssp CS---CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------------CCCCCCCSSC-CC
T ss_pred cc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCC------cCcccccccccccC-CC
Confidence 65 333345677889999999999999999998 77 799999999998655444 67 777 55 5 88
Q ss_pred ChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH------------------HHhhhhhhccccccceecCCCCCc
Q 035631 501 SFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL------------------LKAYENVCTLRLRMPISSDLSNPR 560 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~g~~~~~~ 560 (684)
+.|+.+|+.+|.+.... ..+.++.+.|+..+++.+. ...+...+..+.++.++|++.+.+
T Consensus 179 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~ 258 (377)
T 2q1s_A 179 SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATR 258 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEE
Confidence 99999999999885443 3456777777776665432 112222233333444556666667
Q ss_pred hHHHHhhhcccccccCCCccchhhHHHH-HHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhh
Q 035631 561 NFVTKLARYNKVVNIPNSMTVLDEMLPI-AIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKV 639 (684)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~i~v~D~~~~-~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 639 (684)
+| +|++|+|++ ++.+++++..|+||+++++.+|+.|+++.+.+.+|.+..+...+.. + .
T Consensus 259 ~~-----------------i~v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--~-~ 318 (377)
T 2q1s_A 259 DF-----------------IFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKR--P-W 318 (377)
T ss_dssp CC-----------------EEHHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC--G-G
T ss_pred ee-----------------EEHHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC--c-c
Confidence 77 999999999 9999987655699999999999999999999999976544433311 0 0
Q ss_pred hccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 640 LVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 640 ~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.. .....+|++|+ .++|.+..+++++|+++++++.++
T Consensus 319 ~~--~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 319 DN--SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp GC--C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred cc--ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 11 11567899999 467877778999999999876543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=280.87 Aligned_cols=279 Identities=18% Similarity=0.230 Sum_probs=211.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
+||+|||||||||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+|||+|+...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCC--CEEEECceecC
Confidence 35799999999999999999999999977 35678999999999999866 99999999652
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC--CCCCCCChhhhhhH
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD--EPNFTRSFYSKTKA 508 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~--~~~~p~~~Y~~sK~ 508 (684)
...++..++...+++|+.++.+++++|.+.++ ++||+||.++|+.....+ .+..+++|++ +.. |.+.|+.+|.
T Consensus 106 --~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~-~~~~~~~E~~~~~~~-~~~~Y~~sK~ 181 (379)
T 2c5a_A 106 --GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLE-TTNVSLKESDAWPAE-PQDAFGLEKL 181 (379)
T ss_dssp --CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSS-SSSCEECGGGGSSBC-CSSHHHHHHH
T ss_pred --cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCC-ccCCCcCcccCCCCC-CCChhHHHHH
Confidence 11222567788999999999999999999887 799999999998543211 1122367776 555 8899999999
Q ss_pred hHhhhhhH--HhhhhhhhhhhhhhhhHHH---------HHHhhhhhhccccc-cceecCCCCCchHHHHhhhcccccccC
Q 035631 509 MVTFLSYL--EIFVLVICIECLINFQVEG---------LLKAYENVCTLRLR-MPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 509 ~~E~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.+|.+... ...+.++.+.|+..+++++ ....+...+..+.+ +.++|++.+.++|
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~-------------- 247 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSF-------------- 247 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECC--------------
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEE--------------
Confidence 99988543 3345667777777666543 12222222222222 4566777777788
Q ss_pred CCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--
Q 035631 577 NSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-- 654 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-- 654 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+..+..++... ... ...+|++|+
T Consensus 248 ---i~v~Dva~ai~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------~~~-~~~~d~~k~~~ 317 (379)
T 2c5a_A 248 ---TFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE------GVR-GRNSDNNLIKE 317 (379)
T ss_dssp ---EEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC------CCS-BCEECCHHHHH
T ss_pred ---EEHHHHHHHHHHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC------Ccc-cccCCHHHHHH
Confidence 99999999999999887778999999999999999999999999765443332211 122 457899999
Q ss_pred hhcCCCchhHHHHHHHHHhhcccc
Q 035631 655 KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 655 ~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.++|.+..+++++|+++++++.++
T Consensus 318 ~lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 318 KLGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp HHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHh
Confidence 367877779999999998876543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=274.89 Aligned_cols=281 Identities=15% Similarity=0.149 Sum_probs=206.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
.|+||||||+||||++|+++|+++|++| .++.+|++|.+++.++++++++|+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 4699999999999999999999999876 2356799999999999998888999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
||.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++||.....+ ++|+++.. |.+.|+
T Consensus 83 A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~------~~e~~~~~-~~~~Y~ 152 (345)
T 2z1m_A 83 AAQS---FVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIP------QTEKTPFY-PRSPYA 152 (345)
T ss_dssp CCCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSS------BCTTSCCC-CCSHHH
T ss_pred CCCc---chhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCC------CCccCCCC-CCChhH
Confidence 9965 34444667889999999999999999998874 799999999999765555 78888877 889999
Q ss_pred hhhHhHhhhhhHHhh--hhhhhhhhhhhhhHHHH-----HHhhhh---hhccccc-cceecCCCCCchHHHHhhhccccc
Q 035631 505 KTKAMVTFLSYLEIF--VLVICIECLINFQVEGL-----LKAYEN---VCTLRLR-MPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 505 ~sK~~~E~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
.+|..+|.+...... +..+.+.++.+.++++. ...+.. .+..+.. ....|++...++|
T Consensus 153 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 221 (345)
T 2z1m_A 153 VAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDW----------- 221 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECC-----------
T ss_pred HHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeee-----------
Confidence 999999988544333 33333344333332221 111111 1111111 2244666666677
Q ss_pred ccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccC--Cch-----------hHhhhhh
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSN--FNL-----------EEQAKVL 640 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~-----------~~~~~~~ 640 (684)
+|++|+|++++.+++++..++||+++++.+|+.|+++.+.+.+|.+..+.. ++. .......
T Consensus 222 ------~~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 295 (345)
T 2z1m_A 222 ------GYAPEYVEAMWLMMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEF 295 (345)
T ss_dssp ------EEHHHHHHHHHHHHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGG
T ss_pred ------EEHHHHHHHHHHHHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCccc
Confidence 999999999999998776789999999999999999999999997644321 100 0000111
Q ss_pred ccC--CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 641 VAP--RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 641 ~~~--~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.++ .....+|++|+ .++|.+..+++++|+++++++.+.
T Consensus 296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 296 FRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp SCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 111 12456799999 367877789999999999877653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=271.68 Aligned_cols=272 Identities=10% Similarity=0.079 Sum_probs=203.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhc--CCeE----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDK--GIAF----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~--g~~v----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
+|+|||||||||||++|+++|+++ |++| .++.+|++|.+++.++++..++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~-- 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL-- 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC--
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC--
Confidence 479999999999999999999999 8877 24668999999999999866679999999965
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
. .....++...+++|+.++.+++++|++.++ ++||+||.++|+..... .+.+|+++.. |.+.|+.+|+.+|
T Consensus 80 -~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-----~~~~e~~~~~-~~~~Y~~sK~~~e 151 (312)
T 2yy7_A 80 -S-ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPK-----ENTPQYTIME-PSTVYGISKQAGE 151 (312)
T ss_dssp -H-HHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCS-----SSBCSSCBCC-CCSHHHHHHHHHH
T ss_pred -C-CchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCC-----CCccccCcCC-CCchhHHHHHHHH
Confidence 1 123467788999999999999999999887 79999999999864321 1267777777 8999999999999
Q ss_pred hhhhH--HhhhhhhhhhhhhhhhHHH----------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 512 FLSYL--EIFVLVICIECLINFQVEG----------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 512 ~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+... ...+.++.+.|+..+++.+ ....+...+ ...++.+++++.+.++|
T Consensus 152 ~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------------- 213 (312)
T 2yy7_A 152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPM----------------- 213 (312)
T ss_dssp HHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEE-----------------
T ss_pred HHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeee-----------------
Confidence 88543 3345666777777665422 111221211 11224455666677777
Q ss_pred cchhhHHHHHHHHHhcCc-----cceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhccCCCCCcCCchh
Q 035631 580 TVLDEMLPIAIEMARRNC-----RGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~~-----~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
+|++|+|++++.+++++. +++||+++ +.+|+.|+++.+.+.+|. +..+.+... ....... ...+|++|
T Consensus 214 i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~~----~~~~~~~-~~~~d~~k 287 (312)
T 2yy7_A 214 MYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITYEPDFR----QKIADSW-PASIDDSQ 287 (312)
T ss_dssp EEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEECCCTH----HHHHTTS-CSSBCCHH
T ss_pred eeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEeccCcc----ccccccc-cccCCHHH
Confidence 999999999999998762 27999986 899999999999999983 222222101 1111222 45789999
Q ss_pred h-h-hcCCCchhHHHHHHHHHhhcc
Q 035631 654 L-K-KEFPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 654 l-~-~~~~~~~~~~~~l~~~~~~~~ 676 (684)
+ + ++|.+..+++++|++++++++
T Consensus 288 ~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 288 AREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 9 3 688777899999999998753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=274.03 Aligned_cols=272 Identities=15% Similarity=0.144 Sum_probs=208.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc---C---CeEe------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK---G---IAFE------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~---g---~~v~------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
|||||||||||||++|+++|+++ | ++|. ++.+|++|.+.+.+++.++ |
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGV--D 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTC--C
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCC--C
Confidence 68999999999999999999997 7 7662 3567899999999988665 9
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++||.....+ ++|+++.. |.
T Consensus 79 ~Vih~A~~~---~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~-~~ 148 (337)
T 1r6d_A 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS------WTESSPLE-PN 148 (337)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC------BCTTSCCC-CC
T ss_pred EEEECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCC------CCCCCCCC-CC
Confidence 999999965 33334567788999999999999999999887 799999999998654444 88888887 89
Q ss_pred ChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 501 SFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+.|+.+|..+|.+... ...+.++.+.|+..+++++. ...+...+..+.++.+++++.+.++|
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 217 (337)
T 1r6d_A 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREW----------- 217 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEE-----------
T ss_pred CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEee-----------
Confidence 9999999999988543 33456677777776655432 22222333334445666777777888
Q ss_pred ccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCch
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 652 (684)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+......... ...... ...+|++
T Consensus 218 ------i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~-~~~~d~~ 286 (337)
T 1r6d_A 218 ------VHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----RKGHDL-RYSLDGG 286 (337)
T ss_dssp ------EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----CTTCCC-BCCBCCH
T ss_pred ------EeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCC----CCCCcc-eeecCHH
Confidence 99999999999999876 45699999999999999999999999975321111000 001112 4568999
Q ss_pred hh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 653 KL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 653 kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
|+ .++|.+..+++++|+++++++.+
T Consensus 287 k~~~~lG~~p~~~~~e~l~~~~~~~~~ 313 (337)
T 1r6d_A 287 KIERELGYRPQVSFADGLARTVRWYRE 313 (337)
T ss_dssp HHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 99 36787878899999999987654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=277.39 Aligned_cols=282 Identities=18% Similarity=0.215 Sum_probs=210.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------eeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------FGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
||+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.+++++.++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 36999999999999999999999998763 345789999999999998556999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCC----------CCCCccCC
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGS----------SIGFKEDD 494 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~----------~~~~~e~~ 494 (684)
|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++|+.....+..+ ..+++|++
T Consensus 81 A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~ 157 (347)
T 1orr_A 81 AGQV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 157 (347)
T ss_dssp CCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred Cccc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence 9965 33334557788999999999999999999875 699999999998654332111 12367777
Q ss_pred CCCCCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH--------HHhhhhhhcccc-----ccceecCCCCC
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL--------LKAYENVCTLRL-----RMPISSDLSNP 559 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-----~~~~~g~~~~~ 559 (684)
+.. |.+.|+.+|..+|.+.... ..+.++.+.|+..+++.+. ...+......+. ++.++|++.+.
T Consensus 158 ~~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 236 (347)
T 1orr_A 158 QLD-FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 236 (347)
T ss_dssp CCC-CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CCC-CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce
Confidence 776 8899999999999885443 3456677778777665432 122222222222 45566777788
Q ss_pred chHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCC--cccHHHHHHHHHhhcCCcccccCCchh
Q 035631 560 RNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPG--VISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
++| +|++|+|++++.++++. .+++||++++. ++|+.|+++.+.+.+|.+..+...+..
T Consensus 237 ~~~-----------------i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 299 (347)
T 1orr_A 237 RDV-----------------LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR 299 (347)
T ss_dssp EEC-----------------EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC
T ss_pred Eee-----------------EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCC
Confidence 888 99999999999999852 34599999986 499999999999999976544332210
Q ss_pred HhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 635 EQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 635 ~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
..... ...+|++|+ .++|.+..+++++|+++++++.+..
T Consensus 300 -----~~~~~-~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 340 (347)
T 1orr_A 300 -----ESDQR-VFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSIL 340 (347)
T ss_dssp -----SSCCS-EECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred -----CCCcc-eeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence 01112 457899999 4578777799999999998876643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=275.62 Aligned_cols=274 Identities=12% Similarity=0.124 Sum_probs=207.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC-CeEeee-----------------eccCCChhHHHHHHHhc---CCCeEEEccee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG-IAFEFG-----------------TGRLEDKNSLLDDMKRV---RPTHVLNAAGI 429 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g-~~v~~~-----------------~~d~~d~~~~~~~~~~~---~~d~Vih~a~~ 429 (684)
.|+|||||||||||++|+++|+++| ++|..+ .+|++|.+.+..++++. ++|+|||+|+.
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 125 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 125 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCcc
Confidence 4789999999999999999999999 887432 25677777888877642 46999999996
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
.. . ...++...+++|+.++.+++++|.+.++++||+||..+|+.....+ ++|+++.. |.+.|+.+|..
T Consensus 126 ~~---~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~------~~E~~~~~-p~~~Y~~sK~~ 193 (357)
T 2x6t_A 126 SS---T--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF------IESREYEK-PLNVFGYSKFL 193 (357)
T ss_dssp CC---T--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCC------CSSGGGCC-CSSHHHHHHHH
T ss_pred cC---C--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCC------cCCcCCCC-CCChhHHHHHH
Confidence 52 1 3467788999999999999999999877999999999998655444 88888887 89999999999
Q ss_pred HhhhhhHHh--hhhhhhhhhhhhhhHHH---------HHHhhhhhhccccccceecCCCC-CchHHHHhhhcccccccCC
Q 035631 510 VTFLSYLEI--FVLVICIECLINFQVEG---------LLKAYENVCTLRLRMPISSDLSN-PRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 510 ~E~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 577 (684)
+|.+..... .+.++.+.|+..+++++ ....+...+..+..+.+++++.. .++|
T Consensus 194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 258 (357)
T 2x6t_A 194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF--------------- 258 (357)
T ss_dssp HHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECE---------------
T ss_pred HHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEcc---------------
Confidence 998854433 34566777777666443 12222222333333455666666 6677
Q ss_pred CccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCc-ccccCCchhHhhhhhccCCCCCcCCchhh-h
Q 035631 578 SMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQ-LKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K 655 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~ 655 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+ ....+.+... ....+. ...+|++|+ +
T Consensus 259 --i~v~Dva~ai~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~-~~~~~~~k~~~ 332 (357)
T 2x6t_A 259 --VYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL---KGRYQA-FTQADLTNLRA 332 (357)
T ss_dssp --EEHHHHHHHHHHHHHHCCCEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG---TTSCCS-BCCCCCHHHHH
T ss_pred --EEHHHHHHHHHHHHhcCCCCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc---cccccc-ccccCHHHHHH
Confidence 9999999999999987667799999999999999999999999976 3333322210 011122 567899999 7
Q ss_pred hcC-CCchhHHHHHHHHHhhccc
Q 035631 656 KEF-PEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 656 ~~~-~~~~~~~~~l~~~~~~~~~ 677 (684)
++| .+..+++++|+++++++.+
T Consensus 333 lG~~~~~~~l~e~l~~~~~~~~~ 355 (357)
T 2x6t_A 333 AGYDKPFKTVAEGVTEYMAWLNR 355 (357)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHC-
T ss_pred cCCCCCCCCHHHHHHHHHHHHhh
Confidence 788 6889999999999988754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=276.09 Aligned_cols=281 Identities=17% Similarity=0.192 Sum_probs=208.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
||+||||||+||||++|+++|+++|++|. ++.+|++|.+++.+++++.++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 36999999999999999999999998762 3457899999999999987889
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC----eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV----LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++|++||.++|+.....+ ++|+++..
T Consensus 81 ~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~------~~E~~~~~ 151 (372)
T 1db3_A 81 EVYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP------QKETTPFY 151 (372)
T ss_dssp EEEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS------BCTTSCCC
T ss_pred EEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCC------CCccCCCC
Confidence 999999976 33334567778899999999999999999875 799999999998655444 88888887
Q ss_pred CCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH--------HHhhhhhhcccc-ccceecCCCCCchHHHHh
Q 035631 498 FTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL--------LKAYENVCTLRL-RMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 566 (684)
|.+.|+.+|..+|.+.... ..+..+.+.|+..+++++. ...+...+..+. ....+|++.+.++|
T Consensus 152 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~---- 226 (372)
T 1db3_A 152 -PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW---- 226 (372)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC----
T ss_pred -CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee----
Confidence 8999999999999885443 3344444555544333221 111111122222 23345777777788
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccC--Cch-----------
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSN--FNL----------- 633 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~----------- 633 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+..+.. ++.
T Consensus 227 -------------i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~ 293 (372)
T 1db3_A 227 -------------GHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHD 293 (372)
T ss_dssp -------------EEHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSS
T ss_pred -------------eEHHHHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCccccccccccccccccccccc
Confidence 999999999999998776789999999999999999999999996543221 000
Q ss_pred ----------hHhhhhhccC--CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 634 ----------EEQAKVLVAP--RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 634 ----------~~~~~~~~~~--~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
....+...++ .....+|++|+ .++|.+..+++++|+++++++.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 294 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp CTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 0000110111 11456799999 368888889999999999877654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=271.08 Aligned_cols=273 Identities=12% Similarity=0.115 Sum_probs=192.9
Q ss_pred EEEEEcCCcchhHHHHHHHHhcC-CeEeee-----------------eccCCChhHHHHHHHhc---CCCeEEEcceecC
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKG-IAFEFG-----------------TGRLEDKNSLLDDMKRV---RPTHVLNAAGITG 431 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g-~~v~~~-----------------~~d~~d~~~~~~~~~~~---~~d~Vih~a~~~~ 431 (684)
+|||||||||||++|+++|+++| ++|..+ .+|++|.+.+..++++. ++|+|||+|+...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS 80 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECccccc
Confidence 58999999999999999999999 887432 35677778888888752 4699999999652
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
. ...++...+++|+.++.+++++|.+.++++||+||.++|+.....+ ++|+++.. |.+.|+.+|..+|
T Consensus 81 ---~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~------~~E~~~~~-p~~~Y~~sK~~~e 148 (310)
T 1eq2_A 81 ---T--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF------IESREYEK-PLNVYGYSKFLFD 148 (310)
T ss_dssp ---T--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB------CSSGGGCC-CSSHHHHHHHHHH
T ss_pred ---C--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCC------CCCCCCCC-CCChhHHHHHHHH
Confidence 1 3567788999999999999999999888999999999998655444 78888887 9999999999999
Q ss_pred hhhhHH--hhhhhhhhhhhhhhhHHHH---------HHhhhhhhccccccceecCCCC-CchHHHHhhhcccccccCCCc
Q 035631 512 FLSYLE--IFVLVICIECLINFQVEGL---------LKAYENVCTLRLRMPISSDLSN-PRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 512 ~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+.... ..+.++.+.|+..+++++. ...+...+..+.++.+++++.. .++|
T Consensus 149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------------- 211 (310)
T 1eq2_A 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF----------------- 211 (310)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCE-----------------
T ss_pred HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEcc-----------------
Confidence 885443 3356777777777665432 2223333333444556677777 7788
Q ss_pred cchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcC
Q 035631 580 TVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEF 658 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~ 658 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+ .+..++..... ....+. ...+|++|+ +++|
T Consensus 212 i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~lG~ 288 (310)
T 1eq2_A 212 VYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKL-KGRYQA-FTQADLTNLRAAGY 288 (310)
T ss_dssp EEHHHHHHHHHHHHHHCCCEEEEESCSCCBCHHHHHHHC-----------------------CCC-SCCBCCHHHHHTTC
T ss_pred EEHHHHHHHHHHHHhcCCCCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhh-hccccc-ccccchHHHHhcCC
Confidence 9999999999999987667799999999999999999999999875 22222221100 011122 567899999 6788
Q ss_pred -CCchhHHHHHHHHHhhccc
Q 035631 659 -PEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 659 -~~~~~~~~~l~~~~~~~~~ 677 (684)
.+.++++++|+++++++.+
T Consensus 289 ~~~~~~l~~~l~~~~~~~~~ 308 (310)
T 1eq2_A 289 DKPFKTVAEGVTEYMAWLNR 308 (310)
T ss_dssp CCCCCCHHHHHHHHHHHTC-
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 6889999999999998764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=278.87 Aligned_cols=307 Identities=21% Similarity=0.202 Sum_probs=221.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCC-----------CCCCCCCceEEEecCCCH
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLH-----------PSRASPNFKFLKGDITCA 75 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~-----------~~~~~~~~~~~~~Dl~d~ 75 (684)
..+.+|+|||||||||||++|+++|++. |++|++++|+..... ...+. ......+++++.+|+.|.
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~ 142 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM 142 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence 3445679999999999999999999888 899999999753110 00000 001125789999999998
Q ss_pred HHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC--CCCCCC
Q 035631 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM--ESDIGN 153 (684)
Q Consensus 76 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~ 153 (684)
+.+. .+ .++|+|||+|+.... ..++...+++|+.++.+++++|++ + +++|||+||.++ |.... ....+.
T Consensus 143 ~~l~-~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 143 DDVV-LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTF 213 (427)
T ss_dssp CCCC-CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-GSEECSSCSCCEE
T ss_pred ccCC-Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-CCCccCCCCCccc
Confidence 7776 33 799999999998653 345667889999999999999999 4 799999999999 54211 111223
Q ss_pred CCCCC---CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCceEEec
Q 035631 154 PEASQ---LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 154 ~e~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 223 (684)
+|+++ ..|.+.|+.+|+++|.+++.+.+ .+++++++||++|||+..... .++..++........++. +
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-S 291 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-H
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-c
Confidence 45444 55889999999999999998754 699999999999999976432 347778888877776665 4
Q ss_pred CCCceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec---cCC-----------
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV---QDR----------- 289 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~---~~~----------- 289 (684)
.++..++|++++|+|++++.++..+..+++||+++++++++.|+++.+.+ +|.+......|. ...
T Consensus 292 ~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~ 370 (427)
T 4f6c_A 292 MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSV 370 (427)
T ss_dssp HHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhc
Confidence 46788999999999999999998776889999999999999999999998 552110000000 000
Q ss_pred CCCCcceecCHHHH----HhcCCcccCCHHHHHHHHHHHHHhC
Q 035631 290 PFNDHRYFLDDQKL----KRLGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 290 ~~~~~~~~~d~~k~----~~lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
........+|+++. +++||.+...-++.++.+++++++.
T Consensus 371 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 371 DREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp HHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred cccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 00112345665554 4589988755577899999988765
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=274.30 Aligned_cols=276 Identities=18% Similarity=0.242 Sum_probs=205.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------eeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------FGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
.+|+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.+++++.++|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 357999999999999999999999999772 456899999999999998777999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
|+.. ....+..++...+++|+.++.+++++|.+.+ + ++||+||.+|||..... .+++|+++.. |.+.|+
T Consensus 88 A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~-----~~~~E~~~~~-~~~~Y~ 158 (357)
T 1rkx_A 88 AAQP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI-----WGYRENEAMG-GYDPYS 158 (357)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS-----SCBCTTSCBC-CSSHHH
T ss_pred CCCc---ccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC-----CCCCCCCCCC-CCCccH
Confidence 9954 3344456778899999999999999999876 4 79999999999864431 1278888777 889999
Q ss_pred hhhHhHhhhhhHHh-----------hhhhhhhhhhhhhhHHH------HHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 505 KTKAMVTFLSYLEI-----------FVLVICIECLINFQVEG------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 505 ~sK~~~E~~~~~~~-----------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
.+|..+|.+..... .+.++.+.|+..+++++ +...+...+..+..+. .+++...++|
T Consensus 159 ~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~----- 232 (357)
T 1rkx_A 159 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI-IRNPHAIRPW----- 232 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-CSCTTCEECC-----
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-ECCCCCeecc-----
Confidence 99999998854332 25566777777666543 1222222222222222 2344455666
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhc------CccceeEecCC--CcccHHHHHHHHHhhcCCcccccCCchhHhhhh
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARR------NCRGAWNFTNP--GVISHNEILELYKEYIDPQLKWSNFNLEEQAKV 639 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~------~~~g~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 639 (684)
+|++|+|++++.++++ ..+++||++++ +.+|+.|+++.+.+.+|.+..+...+...
T Consensus 233 ------------v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---- 296 (357)
T 1rkx_A 233 ------------QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---- 296 (357)
T ss_dssp ------------EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------
T ss_pred ------------EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCC----
Confidence 9999999999999874 24679999984 68999999999999999765443221110
Q ss_pred hccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 640 LVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 640 ~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
..... ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 297 ~~~~~-~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 335 (357)
T 1rkx_A 297 PHEAH-YLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 335 (357)
T ss_dssp --CCC-CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred CcCcc-cccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHH
Confidence 11123 668999999 36787778999999999987654
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=272.88 Aligned_cols=273 Identities=16% Similarity=0.212 Sum_probs=199.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCC-hhHH-----------------HHHHHhcCCCeEEEcceecC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLED-KNSL-----------------LDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d-~~~~-----------------~~~~~~~~~d~Vih~a~~~~ 431 (684)
.+|+|||||||||||++|+++|+++|++|..+..+... .+.+ +..+. ++|+|||+|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~d~vih~A~~~- 102 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI--EVDQIYHLASPA- 102 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCC--CCSEEEECCSCC-
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhc--CCCEEEECcccc-
Confidence 45699999999999999999999999988554332110 0000 01122 359999999965
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccC-----CCCCCCCChhhhh
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKED-----DEPNFTRSFYSKT 506 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~-----~~~~~p~~~Y~~s 506 (684)
.......++...+++|+.++.+++++|.+.++++||+||.++|+.....+ ++|+ ++.. |.+.|+.+
T Consensus 103 --~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~------~~E~~~~~~~~~~-~~~~Y~~s 173 (343)
T 2b69_A 103 --SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHP------QSEDYWGHVNPIG-PRACYDEG 173 (343)
T ss_dssp --SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSS------BCTTCCCBCCSSS-TTHHHHHH
T ss_pred --CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCC------CcccccccCCCCC-CCCchHHH
Confidence 23223456778899999999999999999888999999999998665545 5555 4555 77899999
Q ss_pred hHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 507 KAMVTFLSYL--EIFVLVICIECLINFQVEG-------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 507 K~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
|+.+|.+... ...+..+.+.|+..+++++ ....+...+..+.++.++|++.+.++|
T Consensus 174 K~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 238 (343)
T 2b69_A 174 KRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF--------------- 238 (343)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC---------------
T ss_pred HHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEee---------------
Confidence 9999988543 3345667777777666543 122222223333445566777777788
Q ss_pred CccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--h
Q 035631 578 SMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--K 655 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~ 655 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+..+...+... ..+. ...+|++|+ .
T Consensus 239 --v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~~~~-~~~~d~~k~~~~ 310 (343)
T 2b69_A 239 --QYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-----DDPQ-KRKPDIKKAKLM 310 (343)
T ss_dssp --EEHHHHHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT-----TCCC-CCCBCCHHHHHH
T ss_pred --EeHHHHHHHHHHHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC-----CCCc-eecCCHHHHHHH
Confidence 99999999999999877778999999999999999999999999765443322211 1123 567899999 4
Q ss_pred hcCCCchhHHHHHHHHHhhccc
Q 035631 656 KEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 656 ~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
++|.+..+++++|+++++++.+
T Consensus 311 lG~~p~~~l~e~l~~~~~~~~~ 332 (343)
T 2b69_A 311 LGWEPVVPLEEGLNKAIHYFRK 332 (343)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHH
Confidence 6787778999999999887654
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=272.17 Aligned_cols=278 Identities=15% Similarity=0.124 Sum_probs=203.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------eeeeccCCCh-hHHHHHHHhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------EFGTGRLEDK-NSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~d~~d~-~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
|+|||||||||||++|+++|+++ |++| .++.+|++|. +.+.++++++ |+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--d~vih~A~~~ 78 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVAIA 78 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHC--SEEEECBCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCC--CEEEEccccc
Confidence 68999999999999999999998 8876 4567889884 5688888877 9999999965
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCC------CCCCChhh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP------NFTRSFYS 504 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~------~~p~~~Y~ 504 (684)
.......++...+++|+.++.+++++|.+.+.++||+||.++|+.....+ ++|+++. ..|.+.|+
T Consensus 79 ---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~------~~e~~~~~~~~~~~~~~~~Y~ 149 (345)
T 2bll_A 79 ---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY------FDEDHSNLIVGPVNKPRWIYS 149 (345)
T ss_dssp ---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSS------BCTTTCCCBCCCTTCGGGHHH
T ss_pred ---CccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCC------cCCcccccccCcccCcccccH
Confidence 22223456778999999999999999999887899999999998765544 5666542 12567899
Q ss_pred hhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-------------HHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 505 KTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-------------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 505 ~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.+|..+|.+... ...+.++.+.|+..+++.+. ...+...+..+.++.+++++.+.++|
T Consensus 150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------- 222 (345)
T 2bll_A 150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCF------- 222 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEEC-------
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEE-------
Confidence 999999988544 33456777777776655431 12222223333344556667677777
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC-cccHHHHHHHHHhhcCCcccccCCchhH---------
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG-VISHNEILELYKEYIDPQLKWSNFNLEE--------- 635 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------- 635 (684)
+|++|+|++++.+++++ .+++||+++++ .+|+.|+++.+.+.+|.+.....++...
T Consensus 223 ----------i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T 2bll_A 223 ----------TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS 292 (345)
T ss_dssp ----------EEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC----
T ss_pred ----------EEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchh
Confidence 99999999999999865 24599999986 8999999999999998653322221110
Q ss_pred h-hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 636 Q-AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 636 ~-~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
. ........ ...+|++|+ .++|.+..+++++|+++++++.+.
T Consensus 293 ~~~~~~~~~~-~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~ 337 (345)
T 2bll_A 293 YYGKGYQDVE-HRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (345)
T ss_dssp --------CC-CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred hccccccchh-hhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHc
Confidence 0 00001122 567899999 467877789999999999877654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=276.83 Aligned_cols=277 Identities=17% Similarity=0.142 Sum_probs=204.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------eeeccCCChhHHHHHHHhcCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------FGTGRLEDKNSLLDDMKRVRP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------~~~~d~~d~~~~~~~~~~~~~ 420 (684)
+|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++++
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 35899999999999999999999998662 345789999999999998788
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC------eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV------LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~------~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.+|||.... + ++|++
T Consensus 108 d~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~------~~E~~ 177 (381)
T 1n7h_A 108 DEVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-P------QSETT 177 (381)
T ss_dssp SEEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-S------BCTTS
T ss_pred CEEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-C------CCCCC
Confidence 9999999965 33334567788999999999999999998653 8999999999986544 4 88988
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh--hhhhhhhhhhhhhHHHH--------HHhhhhhhccccc-cceecCCCCCchHH
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF--VLVICIECLINFQVEGL--------LKAYENVCTLRLR-MPISSDLSNPRNFV 563 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~g~~~~~~~~~ 563 (684)
+.. |.+.|+.+|+.+|.+...... +..+.+.++.++++++. ...+...+..+.. ...+|++...++|
T Consensus 178 ~~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~- 255 (381)
T 1n7h_A 178 PFH-PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW- 255 (381)
T ss_dssp CCC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC-
T ss_pred CCC-CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee-
Confidence 887 899999999999988544333 33344444444333221 1111111111211 2245666777778
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccc-cCCchhHhhhhhcc
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKW-SNFNLEEQAKVLVA 642 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~ 642 (684)
+|++|+|++++.+++++..++||+++++.+|+.|+++.+.+.+|.+... ..+..... ....
T Consensus 256 ----------------v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~ 317 (381)
T 1n7h_A 256 ----------------GFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF--RPAE 317 (381)
T ss_dssp ----------------EEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS--CSSC
T ss_pred ----------------EEHHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccC--Cccc
Confidence 9999999999999988767899999999999999999999999965321 11111100 0011
Q ss_pred CCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 643 PRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 643 ~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.. ...+|++|+ .++|.+..+++++|+++++++.+.
T Consensus 318 ~~-~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 318 VD-NLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp CC-BCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cc-cccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 12 457799999 367877789999999999876653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=275.67 Aligned_cols=281 Identities=13% Similarity=0.110 Sum_probs=206.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHH-hcCCeEe-----------------------------------------eeeccCCCh
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCK-DKGIAFE-----------------------------------------FGTGRLEDK 408 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~-~~g~~v~-----------------------------------------~~~~d~~d~ 408 (684)
.|+||||||+||||++|+++|+ ++|++|. ++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 3699999999999999999999 9998662 345688899
Q ss_pred hHHHHHHHhcC-CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCC-CCC
Q 035631 409 NSLLDDMKRVR-PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMH-PQG 485 (684)
Q Consensus 409 ~~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~-~~~ 485 (684)
+.+.++++... +|+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++||+||.++|+..... ...
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~ 158 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVST 158 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----
T ss_pred HHHHHHHHhcCCCCEEEECCCcc---CcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccc
Confidence 99999998554 79999999965 22223467788999999999999999999887 69999999999855410 001
Q ss_pred CCCCCccCCCCCCCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHH--------------HHHhhh-----hhh
Q 035631 486 SSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEG--------------LLKAYE-----NVC 544 (684)
Q Consensus 486 ~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~--------------~~~~~~-----~~~ 544 (684)
+..+++|++++. |.+.|+.+|+.+|.+.... ..+.++.+.|+.++++.+ +...+. ...
T Consensus 159 ~~~~~~E~~~~~-p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 1gy8_A 159 NAEPIDINAKKS-PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA 237 (397)
T ss_dssp CCCCBCTTSCCB-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred cccCcCccCCCC-CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence 123488998887 8999999999999885443 335667777777665442 111111 111
Q ss_pred ccc-----------cccceec------CCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC--c-----c--
Q 035631 545 TLR-----------LRMPISS------DLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN--C-----R-- 598 (684)
Q Consensus 545 ~~~-----------~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--~-----~-- 598 (684)
... ..+.++| ++.+.++| ||++|+|++++.++++. . .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~-----------------v~v~Dva~a~~~~l~~~~~~~~~~~~~~ 300 (397)
T 1gy8_A 238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDY-----------------VHVCDLASAHILALDYVEKLGPNDKSKY 300 (397)
T ss_dssp CC-----------CCCEEEECSCSSSTTSSCEECE-----------------EEHHHHHHHHHHHHHHHHTCCTTTGGGS
T ss_pred hcCccccccccccCCCceeecCcccCCCCCeeEee-----------------EeHHHHHHHHHHHHhcccccccccccCC
Confidence 111 1244455 55666777 99999999999998764 2 2
Q ss_pred -ceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCch-hHHHHHHHHHhh
Q 035631 599 -GAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVL-SIKDSIIKYVLE 674 (684)
Q Consensus 599 -g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~-~~~~~l~~~~~~ 674 (684)
++||+++++.+|+.|+++.+.+.+|.+..+...+.. ...+. ...+|++|+ .++|.+.. +++++|++++++
T Consensus 301 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~-~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~ 374 (397)
T 1gy8_A 301 FSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRR-----EGDPA-YLVAASDKAREVLGWKPKYDTLEAIMETSWKF 374 (397)
T ss_dssp EEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCC-----TTCCS-EECBCCHHHHHHTCCCCSCCSHHHHHHHHHHH
T ss_pred CcEEEeCCCCcccHHHHHHHHHHHhCCCCCeeeCCCC-----CCccc-ccccCHHHHHHHhCCCCCcCCHHHHHHHHHHH
Confidence 799999999999999999999999975443322111 11122 567899999 35777665 999999999988
Q ss_pred cccc
Q 035631 675 PNKK 678 (684)
Q Consensus 675 ~~~~ 678 (684)
+.++
T Consensus 375 ~~~~ 378 (397)
T 1gy8_A 375 QRTH 378 (397)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 7654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=267.73 Aligned_cols=275 Identities=15% Similarity=0.126 Sum_probs=200.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.+++++.++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 6899999999999999999999999773 345789999999999987667999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
||.. .......++...+++|+.++.+++++|++.++ ++|++||.++|+.....+ ++|+++...+.+.|+.
T Consensus 81 A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~------~~e~~~~~~~~~~Y~~ 151 (338)
T 1udb_A 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIP------YVESFPTGTPQSPYGK 151 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS------BCTTSCCCCCSSHHHH
T ss_pred CccC---ccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCC------cCcccCCCCCCChHHH
Confidence 9965 22223456678899999999999999998876 799999999998654444 7888776513789999
Q ss_pred hhHhHhhhhhHHh--h-hhhhhhhhhhhhhHHHH---------------HHhhhhhhc-cccccceec------CCCCCc
Q 035631 506 TKAMVTFLSYLEI--F-VLVICIECLINFQVEGL---------------LKAYENVCT-LRLRMPISS------DLSNPR 560 (684)
Q Consensus 506 sK~~~E~~~~~~~--~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~g------~~~~~~ 560 (684)
+|+.+|.+..... . +.++.+.|+.++++.+. ...+..... ....+.++| ++.+.+
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 231 (338)
T 1udb_A 152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231 (338)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceee
Confidence 9999998854432 2 45666666655543211 111111111 111122332 344555
Q ss_pred hHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---cc-ceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh
Q 035631 561 NFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CR-GAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ 636 (684)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~-g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 636 (684)
+| ||++|+|++++.++++. .+ ++||+++++.+|+.|+++.+.+.+|.+......+..
T Consensus 232 ~~-----------------i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-- 292 (338)
T 1udb_A 232 DY-----------------IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR-- 292 (338)
T ss_dssp CE-----------------EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCC--
T ss_pred ee-----------------EEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCC--
Confidence 66 99999999999998753 22 599999999999999999999999975443222111
Q ss_pred hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 637 AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 637 ~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
...+. ...+|++|+ .++|.+..+++++|+++++++.++
T Consensus 293 ---~~~~~-~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 332 (338)
T 1udb_A 293 ---EGDLP-AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp ---TTCCS-BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred ---CCchh-hhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence 11122 567899999 467877779999999999877654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=251.25 Aligned_cols=223 Identities=19% Similarity=0.190 Sum_probs=176.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
||+|||||||||||+++++.|+++ |++|++++|+.. ....+ ..+++++.+|+.|.+.+.+++ .++|+||
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~-----~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 72 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPE--KIKIE-----NEHLKVKKADVSSLDEVCEVC--KGADAVI 72 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGG--GCCCC-----CTTEEEECCCTTCHHHHHHHH--TTCSEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcc--cchhc-----cCceEEEEecCCCHHHHHHHh--cCCCEEE
Confidence 479999999999999999999999 899999999753 11111 268999999999999999999 6899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+... .++ ..+++|+.++.+++++|++.+ +++|||+||.++|+...... .++.+..|.+.|+.+|..
T Consensus 73 ~~a~~~~-----~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~----~~~~~~~p~~~Y~~sK~~ 141 (227)
T 3dhn_A 73 SAFNPGW-----NNP-DIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLR----LMDSGEVPENILPGVKAL 141 (227)
T ss_dssp ECCCC------------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEE----GGGTTCSCGGGHHHHHHH
T ss_pred EeCcCCC-----CCh-hHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCc----cccCCcchHHHHHHHHHH
Confidence 9998642 222 367889999999999999987 89999999998876543322 345567788999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-C
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-I 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~ 250 (684)
.|.+++.++++.+++++++||+++||++.....+. .+....+.. ++. ++|+|++|+|++++.+++++. .
T Consensus 142 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~ 211 (227)
T 3dhn_A 142 GEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHH 211 (227)
T ss_dssp HHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCcccc
Confidence 99999888777899999999999999976433321 222222222 222 799999999999999999875 6
Q ss_pred CcEEEecCCCccCHHH
Q 035631 251 GHVYNVGTKKERSVLD 266 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e 266 (684)
+++|+++++++.++.+
T Consensus 212 g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 212 QERFTIGYLEHHHHHH 227 (227)
T ss_dssp SEEEEEECCSCCC---
T ss_pred CcEEEEEeehhcccCC
Confidence 8999999999988753
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=271.70 Aligned_cols=285 Identities=16% Similarity=0.144 Sum_probs=210.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc-CCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK-GIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~-g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
||||||||+||||++|+++|+++ |++| .++.+|++|.+.+.++++..++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 68999999999999999999998 7766 2456799999999999985567999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc--CC--------eEEEEecceeeecCCC--C--CCCCCCCCcc
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK--NV--------LLMNFATGCIYEYDSM--H--PQGSSIGFKE 492 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~--------~~i~~SS~~vy~~~~~--~--~~~~~~~~~e 492 (684)
|+.. ....+..++...+++|+.++.+++++|.+. ++ ++||+||.+|||.... . ...+..+++|
T Consensus 81 A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E 157 (361)
T 1kew_A 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred CCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence 9965 333445677889999999999999999987 63 8999999999985431 0 0011124888
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHH-----HHhhhhhhccccccceecCCCCCchHHHH
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGL-----LKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+++.. |.+.|+.+|..+|.+.... ..+.++.+.|+..+++.+. ...+...+..+.++++++++.+.++|
T Consensus 158 ~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 233 (361)
T 1kew_A 158 TTAYA-PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW--- 233 (361)
T ss_dssp TSCCC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEE---
T ss_pred CCCCC-CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEee---
Confidence 88887 8999999999999885443 3356677777776665442 22222223333345666777777788
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcCc-cceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhh-hhhccC
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRNC-RGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQA-KVLVAP 643 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~ 643 (684)
+|++|+|++++.++++.. +++||+++++.+|+.|+++.+.+.+|.+..... +..+.. ....++
T Consensus 234 --------------i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~ 298 (361)
T 1kew_A 234 --------------LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYREQITYVADRP 298 (361)
T ss_dssp --------------EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGGGGEEEECCCT
T ss_pred --------------EEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccccceeecCCCC
Confidence 999999999999998764 459999999999999999999999985432110 000000 000011
Q ss_pred --CCCCcCCchhh-h-hcCCCchhHHHHHHHHHhhcccc
Q 035631 644 --RSNNHMDVTKL-K-KEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 644 --~~~~~~d~~kl-~-~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.....+|++|+ + ++|.+..+++++|+++++++.++
T Consensus 299 ~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 299 GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp TCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred cccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 11457899999 3 67877789999999999877543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=264.85 Aligned_cols=239 Identities=23% Similarity=0.329 Sum_probs=197.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
.+.+|+||||||||+||++++++|+++. |+ +|++++|+... ...+.......+++++.+|+.|.+.+.+++ .++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~-g~~~V~~~~r~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~--~~~ 92 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTT-NAKKIIVYSRDELK--QSEMAMEFNDPRMRFFIGDVRDLERLNYAL--EGV 92 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHC-CCSEEEEEESCHHH--HHHHHHHHCCTTEEEEECCTTCHHHHHHHT--TTC
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhC-CCCEEEEEECChhh--HHHHHHHhcCCCEEEEECCCCCHHHHHHHH--hcC
Confidence 3456899999999999999999999982 45 99999996421 111110011257899999999999999998 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+|+....+..+.++...+++|+.++.+++++|.+.+ +++||++||..++ .|.+.|+.
T Consensus 93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-----------------~p~~~Y~~ 154 (344)
T 2gn4_A 93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-----------------NPINLYGA 154 (344)
T ss_dssp SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-----------------SCCSHHHH
T ss_pred CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-----------------CCccHHHH
Confidence 99999999765444445677899999999999999999987 8999999997654 24578999
Q ss_pred HHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC-ceEEecCCCceEecccHHHHHHHHHH
Q 035631 168 TKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDV 243 (684)
Q Consensus 168 sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~ 243 (684)
+|.++|.+++.++.+ .+++++++||++|||+.. ++++.+...+..++ ++.+. ++...++|+|++|+|++++.
T Consensus 155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~---~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~ 230 (344)
T 2gn4_A 155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLK 230 (344)
T ss_dssp HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT---SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC---CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHH
Confidence 999999999887653 479999999999999874 57888888888887 77774 67788999999999999999
Q ss_pred HHhcCCCCcEEEecCCCccCHHHHHHHHHHHh
Q 035631 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLF 275 (684)
Q Consensus 244 ~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~ 275 (684)
++++...+++|++.++ .+++.|+++.+.+.+
T Consensus 231 ~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 231 SLKRMHGGEIFVPKIP-SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHCCSSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred HHhhccCCCEEecCCC-cEEHHHHHHHHHHhC
Confidence 9988777789999865 699999999998654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=274.63 Aligned_cols=274 Identities=14% Similarity=0.080 Sum_probs=201.1
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-----------------------------------------eeeccCCCh
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-----------------------------------------FGTGRLEDK 408 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-----------------------------------------~~~~d~~d~ 408 (684)
.+|+|||||||||||++|+++|+++|++|. ++.+|++|.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 346999999999999999999999998773 245689999
Q ss_pred hHHHHHHHhcCCCeEEEcceecCCCCccccccchh---hHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCC
Q 035631 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRV---ETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHP 483 (684)
Q Consensus 409 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~---~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~ 483 (684)
+.+.+++++.++|+|||+||.. .......++. ..+++|+.++.+++++|.+.++ ++||+||+++||... .+
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~---~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~ 165 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-ID 165 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SC
T ss_pred HHHHHHHhccCCCEEEECCCCC---CccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CC
Confidence 9999999986679999999965 2222223333 4789999999999999999874 799999999998543 23
Q ss_pred CCCCCCCccC--------------CCCCCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-----------
Q 035631 484 QGSSIGFKED--------------DEPNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL----------- 536 (684)
Q Consensus 484 ~~~~~~~~e~--------------~~~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~----------- 536 (684)
++|+ .+.. |.+.|+.+|+.+|.+... ...+.++.+.|+..+++++.
T Consensus 166 ------~~E~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~ 238 (404)
T 1i24_A 166 ------IEEGYITITHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN 238 (404)
T ss_dssp ------BCSSEEEEEETTEEEEEECCCC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred ------CCccccccccccccccccCCCC-CCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccc
Confidence 4443 3455 889999999999988543 33456777778777765432
Q ss_pred -----------HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCc--c--cee
Q 035631 537 -----------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNC--R--GAW 601 (684)
Q Consensus 537 -----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~--~--g~~ 601 (684)
...+...+..+.++.++|++.+.++| +|++|+|++++.+++++. + ++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~-----------------i~v~Dva~a~~~~l~~~~~~g~~~~y 301 (404)
T 1i24_A 239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGY-----------------LDIRDTVQCVEIAIANPAKAGEFRVF 301 (404)
T ss_dssp CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEE-----------------EEHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECc-----------------EEHHHHHHHHHHHHhCcccCCCceEE
Confidence 22222223333345566777777788 999999999999998762 3 499
Q ss_pred EecCCCcccHHHHHHHHHhh---cCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhcc
Q 035631 602 NFTNPGVISHNEILELYKEY---IDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 602 ni~~~~~~s~~e~~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~ 676 (684)
|+++ +.+|+.|+++.+.+. +|.+......+... ...... ...+|++|+ +++|.+..+++++++++++++.
T Consensus 302 ni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~~~---~~~~~~-~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~ 375 (404)
T 1i24_A 302 NQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVPNPR---VEAEEH-YYNAKHTKLMELGLEPHYLSDSLLDSLLNFAV 375 (404)
T ss_dssp EECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEECCSS---CSCSSC-CCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHH
T ss_pred EECC-CCCcHHHHHHHHHHHHHhhCCCccccccCccc---Cccccc-eEecCHHHHHHcCCCcCcCHHHHHHHHHHHHH
Confidence 9998 899999999999998 67654332222110 001112 567899999 7788888889999998877653
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-30 Score=274.64 Aligned_cols=259 Identities=20% Similarity=0.199 Sum_probs=199.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCC-CcEEEEEcCCCcccc-cccCCCCC--------------CCCCceEEEecCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYP-DYEIVALDKLDYCSS-LKNLHPSR--------------ASPNFKFLKGDIT 73 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~-g~~V~~~~r~~~~~~-~~~l~~~~--------------~~~~~~~~~~Dl~ 73 (684)
..+|+|||||||||||++|+++|++.++ |++|++++|+..... ...+.... ...+++++.+|+.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 4568999999999999999999999854 589999999753221 01110000 1257999999998
Q ss_pred ------CHHHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC
Q 035631 74 ------CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 74 ------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~ 147 (684)
+.+.+..++ .++|+|||+|+.... .++...+++|+.++.+++++|++.+ +++|||+||.++|+....
T Consensus 151 ~~~~gld~~~~~~~~--~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLA--ETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp SGGGGCCHHHHHHHH--HHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCT
T ss_pred CcccCCCHHHHHHHH--cCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCC
Confidence 667888888 589999999998764 3445678999999999999999987 899999999999987544
Q ss_pred CCCCCCCCCCCCCCC-----------ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC-----CCCChHHHHHH
Q 035631 148 ESDIGNPEASQLLPT-----------NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ-----FPEKLIPKFIL 211 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~-----------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~ 211 (684)
.. ..|+.+..|. +.|+.+|+++|.+++.++++.+++++++||++|||+.. ....++..++.
T Consensus 224 ~~---~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~ 300 (478)
T 4dqv_A 224 SA---FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL 300 (478)
T ss_dssp TT---CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred CC---cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence 32 2455444333 34999999999999999887899999999999999854 22346666666
Q ss_pred HHHcCCceEE--ec---C---CCceEecccHHHHHHHHHHHHhc-----CCCCcEEEecCCCc--cCHHHHHHHHHHHhC
Q 035631 212 LAMKGQQLPI--HG---N---GSNVRSYLYCADVAEAFDVILHR-----GVIGHVYNVGTKKE--RSVLDVAADICTLFK 276 (684)
Q Consensus 212 ~~~~~~~~~~--~~---~---~~~~~~~i~~~D~a~~i~~~~~~-----~~~~~~~ni~~~~~--~t~~e~~~~i~~~~g 276 (684)
.....+..+. +. + ++..++++|++|+|++++.++.+ ...+++||+++++. +|+.|+++.+.+. |
T Consensus 301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g 379 (478)
T 4dqv_A 301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G 379 (478)
T ss_dssp HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence 5554333322 11 1 25778999999999999999875 34568999999988 9999999999995 6
Q ss_pred CCC
Q 035631 277 LEP 279 (684)
Q Consensus 277 ~~~ 279 (684)
.+.
T Consensus 380 ~~~ 382 (478)
T 4dqv_A 380 YPI 382 (478)
T ss_dssp CSC
T ss_pred CCc
Confidence 543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-30 Score=264.90 Aligned_cols=267 Identities=16% Similarity=0.140 Sum_probs=196.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
.+|+|||||||||||++|+++|+++|++| .++.+|++|.+.+.+++++.++|+|||+|+.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 34799999999999999999999999876 2456799999999999998556999999996
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeee----cCCCCCCCCCCCCccCCCCCCCC-Chh
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYE----YDSMHPQGSSIGFKEDDEPNFTR-SFY 503 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~----~~~~~~~~~~~~~~e~~~~~~p~-~~Y 503 (684)
.. .. +..++. +++|+.++.+++++|.+.++ ++|++||.++|+ .... + ++|++ . |. +.|
T Consensus 100 ~~---~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~------~~E~~--~-p~~~~Y 163 (333)
T 2q1w_A 100 YK---DP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-R------LDHPR--N-PANSSY 163 (333)
T ss_dssp CS---CT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-C------TTSCC--C-CTTCHH
T ss_pred cC---CC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-C------cCCCC--C-CCCCch
Confidence 62 21 233343 89999999999999999887 799999999997 3322 3 77877 4 77 899
Q ss_pred hhhhHhHhhhhhH-HhhhhhhhhhhhhhhhHHH----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 504 SKTKAMVTFLSYL-EIFVLVICIECLINFQVEG----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 504 ~~sK~~~E~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
+.+|..+|.+... .. ++.+.|+.++++++ +...+...+..+. .+++ +...++|
T Consensus 164 ~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~---------------- 221 (333)
T 2q1w_A 164 AISKSANEDYLEYSGL---DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDF---------------- 221 (333)
T ss_dssp HHHHHHHHHHHHHHTC---CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECE----------------
T ss_pred HHHHHHHHHHHHhhhC---CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEee----------------
Confidence 9999999987654 32 55566665444433 1121211111111 2333 3344556
Q ss_pred ccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-hhc
Q 035631 579 MTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKE 657 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~ 657 (684)
+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+ .+...+... ........ ...+|++|+ +.+
T Consensus 222 -i~v~Dva~ai~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-~~~~~~~~-~~~~d~~k~~~~G 297 (333)
T 2q1w_A 222 -VFVKDLARATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRE-LGPDDAPS-ILLDPSRTIQDFG 297 (333)
T ss_dssp -EEHHHHHHHHHHHHTTCCCEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE-CCTTSCCC-CCBCCHHHHHHHC
T ss_pred -EEHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCC-cccccccc-cccCCHHHHHhcC
Confidence 9999999999999987666699999999999999999999999976 333332221 00011113 678999999 557
Q ss_pred CCCchhHHHHHHHHHhhcccc
Q 035631 658 FPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 658 ~~~~~~~~~~l~~~~~~~~~~ 678 (684)
|.+..+++++|+++++++.+.
T Consensus 298 ~~p~~~~~~~l~~~~~~~~~~ 318 (333)
T 2q1w_A 298 KIEFTPLKETVAAAVAYFREY 318 (333)
T ss_dssp CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHH
Confidence 877789999999999877643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=283.52 Aligned_cols=304 Identities=21% Similarity=0.207 Sum_probs=220.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccC----C-------CCCCCCCceEEEecCCCHHHH
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNL----H-------PSRASPNFKFLKGDITCADLM 78 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l----~-------~~~~~~~~~~~~~Dl~d~~~~ 78 (684)
.+|+|||||||||||++|+++|++. |++|++++|+..... ...+ . ......+++++.+|+.+.+.+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 4579999999999999999999887 899999999753110 0000 0 001135799999999997776
Q ss_pred HHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCC--CCCCCCCCC
Q 035631 79 NYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM--ESDIGNPEA 156 (684)
Q Consensus 79 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~~e~ 156 (684)
. + ..++|+|||+|+.... ..++....++|+.++.+++++|++ + +++|||+||.++ |.... ....+.+|.
T Consensus 227 ~-~--~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v-G~~~~~~~~~~~~~E~ 297 (508)
T 4f6l_B 227 V-L--PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFSEA 297 (508)
T ss_dssp C-C--SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT-TSEECTTCSCCEECTT
T ss_pred C-C--ccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh-ccCCccCCcCcccccc
Confidence 6 3 3799999999997653 345567789999999999999998 4 699999999999 43211 111223444
Q ss_pred CC---CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCceEEecCCC
Q 035631 157 SQ---LLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 157 ~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
++ ..|.+.|+.+|+.+|.+++.+.+ .+++++++||++|||+..... ..+..++........++. ++++
T Consensus 298 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~ 375 (508)
T 4f6l_B 298 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAE 375 (508)
T ss_dssp CSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGG
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccC
Confidence 44 45789999999999999998754 699999999999999975332 346777777777666554 4467
Q ss_pred ceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec---cC-----------CCCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV---QD-----------RPFN 292 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~---~~-----------~~~~ 292 (684)
..++|+|++|+|++++.++..+..+++||+++++++++.|+++.+.+.. .+......|. .. ....
T Consensus 376 ~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~ 454 (508)
T 4f6l_B 376 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDRE 454 (508)
T ss_dssp SEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGG
T ss_pred ceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhccccccc
Confidence 8899999999999999999887778999999999999999999998754 1110000000 00 0011
Q ss_pred CcceecCHHH----HHhcCCcccCCHHHHHHHHHHHHHhC
Q 035631 293 DHRYFLDDQK----LKRLGWKEKTPWEEGLKLTLEWYKKN 328 (684)
Q Consensus 293 ~~~~~~d~~k----~~~lg~~p~~~~~e~i~~~i~~~~~~ 328 (684)
.....+|+++ ++++||.+....++.++++++|+++.
T Consensus 455 ~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 455 QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp SEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred CcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1234566555 34589988766688899999988765
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=267.15 Aligned_cols=273 Identities=12% Similarity=0.067 Sum_probs=192.8
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
++|+|||||||||||++|+++|+++|++| +++.+|++|.+++.++++++ |+|||+|+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~a~~~- 88 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGL--DGVIFSAGYY- 88 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTC--SEEEEC-----
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCC--CEEEECCccC-
Confidence 34799999999999999999999999976 35668999999999999876 9999999965
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC----CChhhhh
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT----RSFYSKT 506 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p----~~~Y~~s 506 (684)
. ....++...+++|+.++.+++++|.+.++ ++||+||.++|+...... . .+|++++. | .+.|+.+
T Consensus 89 --~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~----~-~~E~~~~~-p~~~~~~~Y~~s 158 (342)
T 2x4g_A 89 --P--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGL----P-GHEGLFYD-SLPSGKSSYVLC 158 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSS----C-BCTTCCCS-SCCTTSCHHHHH
T ss_pred --c--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCC----C-CCCCCCCC-ccccccChHHHH
Confidence 1 23457788999999999999999999886 799999999998544310 1 37777777 8 8899999
Q ss_pred hHhHhhhhhHHhh-hhhhhhhhhhhhhHHHH----HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 507 KAMVTFLSYLEIF-VLVICIECLINFQVEGL----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 507 K~~~E~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
|..+|.+...... +.++.+.|+..+++.+. ...+...+..+..+.+ +...++ ++|
T Consensus 159 K~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~i~ 218 (342)
T 2x4g_A 159 KWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRN-----------------VID 218 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEE-----------------EEE
T ss_pred HHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcc-----------------eee
Confidence 9999988544322 56666677765544322 1111111111111111 223334 499
Q ss_pred hhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhh--------------------h-
Q 035631 582 LDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAK--------------------V- 639 (684)
Q Consensus 582 v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------------------~- 639 (684)
++|+|++++.+++++ .+++||+++++ +|+.|+++.+.+.+|.+..+ .++...... .
T Consensus 219 v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
T 2x4g_A 219 AAEAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETA 296 (342)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 999999999999876 46699999998 99999999999999976554 444321100 0
Q ss_pred hccCCCCCcCCchhh-h-hcC-CCchhHHHHHHHHHhhcccc
Q 035631 640 LVAPRSNNHMDVTKL-K-KEF-PEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 640 ~~~~~~~~~~d~~kl-~-~~~-~~~~~~~~~l~~~~~~~~~~ 678 (684)
.........+|++|+ + ++| .+ .+++++|+++++++.++
T Consensus 297 ~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 297 IEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDN 337 (342)
T ss_dssp -CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHc
Confidence 000012678899999 3 688 77 89999999999877654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=251.42 Aligned_cols=236 Identities=19% Similarity=0.220 Sum_probs=191.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
||+|||||||||||++++++|+++ |++|++++|+... .+ ..+++++.+|+.|.+.+.+++ .++|+||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~----~~-----~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 68 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLG----AA-----EAHEEIVACDLADAQAVHDLV--KDCDGII 68 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCC----CC-----CTTEEECCCCTTCHHHHHHHH--TTCSEEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCcc----cc-----CCCccEEEccCCCHHHHHHHH--cCCCEEE
Confidence 578999999999999999999999 8999999997521 11 146788999999999999998 6899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+... ..+....+++|+.++.+++++|++.+ +++|||+||..+|+..... .+.+|+++..|.+.|+.+|..
T Consensus 69 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~--~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 69 HLGGVSV----ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRT--TRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp ECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTT--SCBCTTSCCCCCSHHHHHHHH
T ss_pred ECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCC--CCCCCCCCCCCCChHHHHHHH
Confidence 9999752 35667889999999999999999877 8999999999999864322 234677888899999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC-
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI- 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~- 250 (684)
+|.+++.+..+++++++++||+++|+... ++...++++|++|+|+++..+++++..
T Consensus 142 ~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~ 198 (267)
T 3ay3_A 142 GEDLASLYYHKFDIETLNIRIGSCFPKPK-----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG 198 (267)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECBCSSSCC-----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHcCCCEEEEeceeecCCCC-----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence 99999988888899999999999995311 112346889999999999999987654
Q ss_pred CcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHH
Q 035631 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLE 323 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~ 323 (684)
.++|++.++.. ..+.|..+++.+||+|+++++++++++.+
T Consensus 199 ~~~~~~~~~~~---------------------------------~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 199 CTVVYGASANT---------------------------------ESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp EEEEEECCSCS---------------------------------SCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ceeEecCCCcc---------------------------------ccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 46787764321 12345566645999999999999887754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=252.59 Aligned_cols=260 Identities=16% Similarity=0.176 Sum_probs=199.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||+++++.|+++.+|++|++++|+... ...+. ..+++++.+|+.|.+.+.+++ .++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~l~----~~~~~~~~~D~~d~~~l~~~~--~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK--ASTLA----DQGVEVRHGDYNQPESLQKAF--AGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT--THHHH----HTTCEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH--HhHHh----hcCCeEEEeccCCHHHHHHHH--hcCCEEEE
Confidence 57999999999999999999987446899999996421 11111 246889999999999999998 68999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+... . . ++|+.++.+++++|++.+ +++|||+||.++|.. ...|+.+|..+
T Consensus 73 ~a~~~~-----~---~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~ 124 (287)
T 2jl1_A 73 ISGPHY-----D---N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEES-----------------IIPLAHVHLAT 124 (287)
T ss_dssp CCCCCS-----C---H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGGC-----------------CSTHHHHHHHH
T ss_pred cCCCCc-----C---c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------CCchHHHHHHH
Confidence 998521 1 1 579999999999999987 899999999888621 13699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~ 251 (684)
|.+++. ++++++++||+.++|+.. ..++.. ....+. .. ...++..++|+|++|+|+++..++.++ ..+
T Consensus 125 E~~~~~----~~~~~~ilrp~~~~~~~~--~~~~~~---~~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 193 (287)
T 2jl1_A 125 EYAIRT----TNIPYTFLRNALYTDFFV--NEGLRA---STESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHEN 193 (287)
T ss_dssp HHHHHH----TTCCEEEEEECCBHHHHS--SGGGHH---HHHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTT
T ss_pred HHHHHH----cCCCeEEEECCEeccccc--hhhHHH---HhhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCC
Confidence 999853 589999999999888642 122222 222332 33 355677889999999999999999875 357
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC---------CCC---------------CcceecCHHHHHh-c
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR---------PFN---------------DHRYFLDDQKLKR-L 306 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~---------~~~---------------~~~~~~d~~k~~~-l 306 (684)
++||+++++.+|+.|+++.+.+.+|.+.+ +...+.. ... ......|++|+++ |
T Consensus 194 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (287)
T 2jl1_A 194 KTYNLVSNQPWTFDELAQILSEVSGKKVV--HQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLI 271 (287)
T ss_dssp EEEEECCSSCBCHHHHHHHHHHHHSSCCE--EEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred cEEEecCCCcCCHHHHHHHHHHHHCCcce--EEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHh
Confidence 89999999999999999999999997643 2211110 000 1234567889988 9
Q ss_pred CCcccCCHHHHHHHHHH
Q 035631 307 GWKEKTPWEEGLKLTLE 323 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~ 323 (684)
| |.++++++|+++++
T Consensus 272 G--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 272 G--SLTPLKETVKQALK 286 (287)
T ss_dssp S--SCCCHHHHHHHHHT
T ss_pred C--CCCCHHHHHHHHhc
Confidence 9 77899999998875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=259.59 Aligned_cols=265 Identities=17% Similarity=0.194 Sum_probs=195.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
.|+||||||+||||++|+++|+++|++| .++.+|++|.+++.++++..++|+|||+||..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 4799999999999999999999999876 24567999999999999855569999999966
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
. .. +..++. +++|+.++.+++++|.+.++ ++|++||.++|+..... ..+++|++ . |.+.|+.+|+.
T Consensus 100 ~---~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~E~~--~-~~~~Y~~sK~~ 166 (330)
T 2pzm_A 100 K---DP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATV----PIPIDSPT--A-PFTSYGISKTA 166 (330)
T ss_dssp S---CT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSS----SBCTTCCC--C-CCSHHHHHHHH
T ss_pred C---Cc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccC----CCCcCCCC--C-CCChHHHHHHH
Confidence 2 21 233343 89999999999999999887 79999999999854332 01277777 4 77899999999
Q ss_pred HhhhhhHHhhhhhhhhhhhhhhhHHHH----HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhH
Q 035631 510 VTFLSYLEIFVLVICIECLINFQVEGL----LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEM 585 (684)
Q Consensus 510 ~E~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 585 (684)
+|.+.... +....+.|+.++++++. ...+...+..+. .+++++. .++| +|++|+
T Consensus 167 ~e~~~~~~--~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~-----------------i~~~Dv 224 (330)
T 2pzm_A 167 GEAFLMMS--DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDF-----------------LDMSDF 224 (330)
T ss_dssp HHHHHHTC--SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECE-----------------EEHHHH
T ss_pred HHHHHHHc--CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-Eecc-----------------eeHHHH
Confidence 99875544 45556666555544331 111111111111 3344444 5566 999999
Q ss_pred HH-HHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-----h-hcC
Q 035631 586 LP-IAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-----K-KEF 658 (684)
Q Consensus 586 ~~-~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-----~-~~~ 658 (684)
|+ +++.+++++.+++||+++++.+|+.|+++.+.+.+|.+ .+...+... ... ...+|++|+ + ++|
T Consensus 225 a~~a~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~------~~~-~~~~d~~k~~~~~l~~lG~ 296 (330)
T 2pzm_A 225 LAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA------PGA-DDVPSVVLDPSKTETEFGW 296 (330)
T ss_dssp HHHHHHHTSTTCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC------CCT-TSCSEECBCCHHHHHHHCC
T ss_pred HHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc------chh-hccCCHHHHhhchHHHcCC
Confidence 99 99999876556699999999999999999999999976 333332211 122 556777776 4 467
Q ss_pred CCchhHHHHHHHHHhhcccc
Q 035631 659 PEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 659 ~~~~~~~~~l~~~~~~~~~~ 678 (684)
.+..+++++|+++++++.+.
T Consensus 297 ~p~~~~~~~l~~~~~~~~~~ 316 (330)
T 2pzm_A 297 KAKVDFKDTITGQLAWYDKY 316 (330)
T ss_dssp CCCCCHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhh
Confidence 67779999999999877653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=256.57 Aligned_cols=273 Identities=15% Similarity=0.161 Sum_probs=199.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhc--CCeEe-------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDK--GIAFE-------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDW 437 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~--g~~v~-------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 437 (684)
|||||||+||||++|+++|+++ |++|. ++.+|++|.+++.++++..++|+|||+|+.. . ..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~-~~ 76 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL---S-AK 76 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC---H-HH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCccc---C-Cc
Confidence 5899999999999999999999 88773 4568999999999999865679999999965 1 22
Q ss_pred cccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhH
Q 035631 438 CESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 438 ~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~ 516 (684)
...++...+++|+.++.+++++|.+.++ ++||+||..+|+..... .+.+|+++.. |.+.|+.+|..+|.+...
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~-----~~~~e~~~~~-p~~~Y~~sK~~~e~~~~~ 150 (317)
T 3ajr_A 77 GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPK-----NKVPSITITR-PRTMFGVTKIAAELLGQY 150 (317)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCS-----SSBCSSSCCC-CCSHHHHHHHHHHHHHHH
T ss_pred cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCC-----CCccccccCC-CCchHHHHHHHHHHHHHH
Confidence 3456788999999999999999999887 79999999999854221 1267777777 899999999999988543
Q ss_pred --HhhhhhhhhhhhhhhhHHH----------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhh
Q 035631 517 --EIFVLVICIECLINFQVEG----------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDE 584 (684)
Q Consensus 517 --~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 584 (684)
...+.++.+.|+..+++.+ ....+...+ ..-++..++++...++| +|++|
T Consensus 151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------------i~v~D 212 (317)
T 3ajr_A 151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAV-KREKYKCYLAPNRALPM-----------------MYMPD 212 (317)
T ss_dssp HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHH-TTCCEEECSCTTCCEEE-----------------EEHHH
T ss_pred HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHH-hCCCceeecCccceeee-----------------eEHHH
Confidence 3334566666655444321 111111111 11123344555666677 99999
Q ss_pred HHHHHHHHHhcCc-----cceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhccCCCCCcCCchhh--hh
Q 035631 585 MLPIAIEMARRNC-----RGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KK 656 (684)
Q Consensus 585 ~~~~~~~~~~~~~-----~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~ 656 (684)
+|++++.+++++. +++||+++ +.+|+.|+++.+.+.+|. +..+.+. . ........ ...+|++|+ .+
T Consensus 213 va~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~~~~--~--~~~~~~~~-~~~~d~~k~~~~l 286 (317)
T 3ajr_A 213 ALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEYKED--F--RDKIAATW-PESLDSSEASNEW 286 (317)
T ss_dssp HHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEECCC--H--HHHHHTTS-CSCBCCHHHHHHH
T ss_pred HHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCccccccccc--c--chhhcccc-ccccCHHHHHHHc
Confidence 9999999998762 36999986 689999999999999883 2222221 1 11112222 457899999 46
Q ss_pred cCCCchhHHHHHHHHHhhccccc
Q 035631 657 EFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 657 ~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+|.+..+++++|+++++++.++.
T Consensus 287 G~~p~~~~~~~l~~~~~~~~~~~ 309 (317)
T 3ajr_A 287 GFSIEYDLDRTIDDMIDHISEKL 309 (317)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhhh
Confidence 78787899999999998776543
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=260.28 Aligned_cols=275 Identities=13% Similarity=0.055 Sum_probs=193.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC-------CeE------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG-------IAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g-------~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|+||||||+||||++|+++|+++| ++| .++.+|++|.+.+.+++++ ++|+||
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vi 91 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEA-RPDVIF 91 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHT-CCSEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhc-CCCEEE
Confidence 35799999999999999999999999 665 3466899999999988852 459999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC------CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN------VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~------~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+|+.. ...+..++...+++|+.++.+++++|.+.+ .++|++||..+|+.....+ ++|++++.
T Consensus 92 h~A~~~----~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~------~~E~~~~~- 160 (342)
T 2hrz_A 92 HLAAIV----SGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP------IPDEFHTT- 160 (342)
T ss_dssp ECCCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS------BCTTCCCC-
T ss_pred ECCccC----cccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC------cCCCCCCC-
Confidence 999965 123346778899999999999999999865 4799999999998654444 88999888
Q ss_pred CCChhhhhhHhHhhhhhHHhh--hhhhhhhhhhhhhH-HH--------HHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 499 TRSFYSKTKAMVTFLSYLEIF--VLVICIECLINFQV-EG--------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
|.+.|+.+|+.+|.+...... +....+.|+..+++ ++ +...+......+..+.+.+++...+.
T Consensus 161 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 234 (342)
T 2hrz_A 161 PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHW------ 234 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEE------
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCcccee------
Confidence 999999999999988544332 23333344433321 11 11111111111111112222222233
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC-----ccceeEecCCCcccHHHHHHHHHhhcCCccc--ccCCchhHhhhhh
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN-----CRGAWNFTNPGVISHNEILELYKEYIDPQLK--WSNFNLEEQAKVL 640 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~ 640 (684)
++|++|+|++++.+++.+ .+++||++ ++.+|+.|+++.+.+.+|.+.. +...+..... ..
T Consensus 235 -----------~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-~~ 301 (342)
T 2hrz_A 235 -----------HASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIM-RM 301 (342)
T ss_dssp -----------EECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH-HH
T ss_pred -----------eEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchh-hh
Confidence 499999999999999865 25699995 5789999999999999986431 2111211111 11
Q ss_pred ccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhcc
Q 035631 641 VAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 641 ~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~ 676 (684)
.... ...+|++|+ +++|.+..+++++|+++++++.
T Consensus 302 ~~~~-~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 302 CEGW-APGFEAKRARELGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp HTTS-CCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred hccc-ccccChHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence 1112 346899999 6677777899999999998876
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=253.52 Aligned_cols=254 Identities=11% Similarity=0.039 Sum_probs=186.9
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
.|||||||||+ ||||++|+++|+++|++| +++.+|++|.+ +.++ |+|||+|+..
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~--d~vi~~a~~~ 74 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGV--THLLISTAPD 74 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTC--CEEEECCCCB
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCC--CEEEECCCcc
Confidence 35689999998 999999999999999987 45667777644 4454 9999999965
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHH--cCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKE--KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~--~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK 507 (684)
. . .. ..+.+++++|++ .++ ++||+||++||+.....+ ++|++++. |.+.|+.+|
T Consensus 75 ~---~----~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~------~~E~~~~~-p~~~Y~~sK 131 (286)
T 3ius_A 75 S---G----GD---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAW------VDETTPLT-PTAARGRWR 131 (286)
T ss_dssp T---T----BC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCE------ECTTSCCC-CCSHHHHHH
T ss_pred c---c----cc---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCC------cCCCCCCC-CCCHHHHHH
Confidence 1 1 11 135789999998 555 699999999999765555 89999988 999999999
Q ss_pred HhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHH
Q 035631 508 AMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLP 587 (684)
Q Consensus 508 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~ 587 (684)
..+|++.... .+.++.+.|+..+++.+... ...+..+..+.+.++ ++.++| +|++|+|+
T Consensus 132 ~~~E~~~~~~-~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~-~~~~~~-----------------i~v~Dva~ 190 (286)
T 3ius_A 132 VMAEQQWQAV-PNLPLHVFRLAGIYGPGRGP--FSKLGKGGIRRIIKP-GQVFSR-----------------IHVEDIAQ 190 (286)
T ss_dssp HHHHHHHHHS-TTCCEEEEEECEEEBTTBSS--STTSSSSCCCEEECT-TCCBCE-----------------EEHHHHHH
T ss_pred HHHHHHHHhh-cCCCEEEEeccceECCCchH--HHHHhcCCccccCCC-Ccccce-----------------EEHHHHHH
Confidence 9999886555 66777888888776654211 222233333444444 467788 99999999
Q ss_pred HHHHHHhcCc-cceeEecCCCcccHHHHHHHHHhhcCCccccc-CCchhHhhhh--hccCCCCCcCCchhh-h-hcCCCc
Q 035631 588 IAIEMARRNC-RGAWNFTNPGVISHNEILELYKEYIDPQLKWS-NFNLEEQAKV--LVAPRSNNHMDVTKL-K-KEFPEV 661 (684)
Q Consensus 588 ~~~~~~~~~~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~--~~~~~~~~~~d~~kl-~-~~~~~~ 661 (684)
+++.+++++. +++||+++++.+|+.|+++.+.+.+|.+.... +.......+. ..... ...+|++|+ + ++|.+.
T Consensus 191 a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG~~p~ 269 (286)
T 3ius_A 191 VLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSE-NKRVRNDRIKEELGVRLK 269 (286)
T ss_dssp HHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSC-CCEECCHHHHHTTCCCCS
T ss_pred HHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcC-CceeehHHHHHHhCCCCC
Confidence 9999999874 55999999999999999999999999754321 1111100110 01113 678899999 4 578777
Q ss_pred h-hHHHHHHHHHhhc
Q 035631 662 L-SIKDSIIKYVLEP 675 (684)
Q Consensus 662 ~-~~~~~l~~~~~~~ 675 (684)
. +++++|+++++++
T Consensus 270 ~p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 270 YPNYRVGLEALQADA 284 (286)
T ss_dssp CSSHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHhc
Confidence 5 7999999999765
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=260.94 Aligned_cols=213 Identities=19% Similarity=0.264 Sum_probs=187.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|||||||||||||++|+++|+++ |+ +|+.++|+ .|.+.+.+++ .++|+||
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~-------------------------~d~~~l~~~~--~~~d~Vi 51 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ-------------------------TKEEELESAL--LKADFIV 51 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT-------------------------CCHHHHHHHH--HHCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC-------------------------CCHHHHHHHh--ccCCEEE
Confidence 68999999999999999999999 77 88887772 5688888888 5799999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
|+|+.... .++...++.|+.++.+|+++|++.+ ++ +|||+||..+|+ .+.|+.+|.
T Consensus 52 h~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~------------------~~~Y~~sK~ 108 (369)
T 3st7_A 52 HLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ------------------DNPYGESKL 108 (369)
T ss_dssp ECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS------------------CSHHHHHHH
T ss_pred ECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC------------------CCCchHHHH
Confidence 99997653 3445567889999999999999987 55 999999999986 357999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
++|++++.++++.+++++++||+++||++..+ .++++.++..+..+.++.+ .+++..++++|++|+|++++.++.++
T Consensus 109 ~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~ 187 (369)
T 3st7_A 109 QGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGT 187 (369)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence 99999999998889999999999999997654 3688899999988888776 57788999999999999999999987
Q ss_pred CC--CcEEEecCCCccCHHHHHHHHHHHhCCC
Q 035631 249 VI--GHVYNVGTKKERSVLDVAADICTLFKLE 278 (684)
Q Consensus 249 ~~--~~~~ni~~~~~~t~~e~~~~i~~~~g~~ 278 (684)
.. +++||+++++.+|+.|+++.+.+.+|.+
T Consensus 188 ~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp CCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred cccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 76 7899999999999999999999998864
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=248.72 Aligned_cols=259 Identities=17% Similarity=0.192 Sum_probs=192.7
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
+|||||||||||+++++.|+++.+|++|++++|++.. ...+. ..+++++.+|+.|.+.+.+++ .++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK--AQALA----AQGITVRQADYGDEAALTSAL--QGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT--CHHHH----HTTCEEEECCTTCHHHHHHHT--TTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh--hhhhh----cCCCeEEEcCCCCHHHHHHHH--hCCCEEEEe
Confidence 5899999999999999999987336899999996421 11111 136889999999999999998 689999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 173 (684)
|+... ..|+.++++++++|++.+ +++||++||..+|. ....|+.+|..+|
T Consensus 73 a~~~~------------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~-----------------~~~~y~~sK~~~e 122 (286)
T 2zcu_A 73 SSSEV------------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT-----------------SPLGLADEHIETE 122 (286)
T ss_dssp C--------------------CHHHHHHHHHHHHT-CCEEEEEEETTTTT-----------------CCSTTHHHHHHHH
T ss_pred CCCCc------------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC-----------------CcchhHHHHHHHH
Confidence 98521 147889999999999987 89999999988861 0136999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC-CCCc
Q 035631 174 MLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG-VIGH 252 (684)
Q Consensus 174 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~ 252 (684)
.+++. .+++++++||+.++++.. .++. ....++.+. .+.++..++++|++|+|+++..++.++ ..++
T Consensus 123 ~~~~~----~~~~~~ilrp~~~~~~~~---~~~~----~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~ 190 (286)
T 2zcu_A 123 KMLAD----SGIVYTLLRNGWYSENYL---ASAP----AALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGK 190 (286)
T ss_dssp HHHHH----HCSEEEEEEECCBHHHHH---TTHH----HHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTC
T ss_pred HHHHH----cCCCeEEEeChHHhhhhH---HHhH----HhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCc
Confidence 99864 489999999987666421 1222 222233444 456678899999999999999999875 4578
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC---------CCC---------------CcceecCHHHHHh-cC
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR---------PFN---------------DHRYFLDDQKLKR-LG 307 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~---------~~~---------------~~~~~~d~~k~~~-lg 307 (684)
+||+++++.+|+.|+++.+.+.+|.+.+ +...+.. ... ......|++++++ ||
T Consensus 191 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 268 (286)
T 2zcu_A 191 VYELAGDSAWTLTQLAAELTKQSGKQVT--YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIG 268 (286)
T ss_dssp EEEECCSSCBCHHHHHHHHHHHHSSCCE--EEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHT
T ss_pred eEEEeCCCcCCHHHHHHHHHHHHCCCCc--eeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhC
Confidence 9999999999999999999999997643 2111110 000 0124567889987 99
Q ss_pred CcccCCHHHHHHHHHHHH
Q 035631 308 WKEKTPWEEGLKLTLEWY 325 (684)
Q Consensus 308 ~~p~~~~~e~i~~~i~~~ 325 (684)
| |.++++++|+++++||
T Consensus 269 ~-~~~~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 269 H-PTTTLAESVSHLFNVN 285 (286)
T ss_dssp S-CCCCHHHHHHGGGC--
T ss_pred c-CCCCHHHHHHHHHhhc
Confidence 7 5569999999999886
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-29 Score=249.13 Aligned_cols=258 Identities=16% Similarity=0.144 Sum_probs=189.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee----------eeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF----------GTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESH 441 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~----------~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 441 (684)
|+||||||+||||++++++|+ +|++|.. +.+|++|.+++.+++++.++|+|||+||.. ....+..+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~ 76 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMT---DVDKCEIE 76 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHC
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCccc---ChhhhhhC
Confidence 589999999999999999999 5898854 458999999999999986679999999965 33334567
Q ss_pred hhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhh
Q 035631 442 RVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVL 521 (684)
Q Consensus 442 ~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 521 (684)
+...+++|+.++.+++++|.+.++++|++||..+|++... + ++|++++. |.+.|+.+|..+|.+... .
T Consensus 77 ~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~------~~e~~~~~-~~~~Y~~sK~~~e~~~~~----~ 144 (273)
T 2ggs_A 77 KEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-N------YKEEDIPN-PINYYGLSKLLGETFALQ----D 144 (273)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-S------BCTTSCCC-CSSHHHHHHHHHHHHHCC----T
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-C------cCCCCCCC-CCCHHHHHHHHHHHHHhC----C
Confidence 8899999999999999999998889999999999975432 3 88888887 889999999999987654 3
Q ss_pred hhhhhhhhhhhHHH-HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccce
Q 035631 522 VICIECLINFQVEG-LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGA 600 (684)
Q Consensus 522 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~ 600 (684)
...+.|+..+++.. +...+......+..+.+.++ .++| +|++|+|++++.+++++.+|+
T Consensus 145 ~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------~~~~dva~~i~~~~~~~~~g~ 204 (273)
T 2ggs_A 145 DSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG---YYSP-----------------ISARKLASAILELLELRKTGI 204 (273)
T ss_dssp TCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESC---EECC-----------------CBHHHHHHHHHHHHHHTCCEE
T ss_pred CeEEEeccccccccHHHHHHHHHHHcCCCEEeecC---CCCc-----------------eEHHHHHHHHHHHHhcCcCCe
Confidence 45556666544311 11111111112222223332 4455 999999999999998777789
Q ss_pred eEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhhh--hcCCC-chhHHHHH
Q 035631 601 WNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLK--KEFPE-VLSIKDSI 668 (684)
Q Consensus 601 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~--~~~~~-~~~~~~~l 668 (684)
||+++ +.+|+.|+++.+.+.+|.+..+....... .....++. ...+|++|++ ++|.+ ..++++++
T Consensus 205 ~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~-~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 205 IHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVR-GWIAKRPY-DSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCT-TCCSCCCS-BCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred EEECC-CcccHHHHHHHHHHHhCCChhhccccccc-ccccCCCc-ccccCHHHHHHHhCCCCCCccccccc
Confidence 99999 99999999999999999764432100000 01112334 6789999993 56765 56666543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=238.82 Aligned_cols=208 Identities=22% Similarity=0.255 Sum_probs=176.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|+||||||+|+||+++++.|+++ |++|++++|+... ....+++++.+|+.|.+++..++ .++|+|
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~v 68 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLD---------PAGPNEECVQCDLADANAVNAMV--AGCDGI 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCC---------CCCTTEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCcc---------ccCCCCEEEEcCCCCHHHHHHHH--cCCCEE
Confidence 4578999999999999999999999 8999999997421 11457899999999999999999 699999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+||.. ...++...+++|+.++.+++++|++.+ +++||++||..+||..... ...+|+.+..|.+.|+.+|.
T Consensus 69 i~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~--~~~~e~~~~~~~~~Y~~sK~ 141 (267)
T 3rft_A 69 VHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQT--ERLGPDVPARPDGLYGVSKC 141 (267)
T ss_dssp EECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTT--SCBCTTSCCCCCSHHHHHHH
T ss_pred EECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCC--CCCCCCCCCCCCChHHHHHH
Confidence 9999984 346778899999999999999999987 8999999999999754432 23467778889999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
..|.+++.++.+++++++++||+.|||+. .++...++|++++|+++++..+++.+..
T Consensus 142 ~~e~~~~~~a~~~g~~~~~vr~~~v~~~~-----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 198 (267)
T 3rft_A 142 FGENLARMYFDKFGQETALVRIGSCTPEP-----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVL 198 (267)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECBCSSSC-----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHhCCeEEEEEeecccCCC-----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCC
Confidence 99999999988889999999999999872 2234456889999999999999987664
Q ss_pred C-cEEEecCCCc
Q 035631 251 G-HVYNVGTKKE 261 (684)
Q Consensus 251 ~-~~~ni~~~~~ 261 (684)
+ .++++.++++
T Consensus 199 ~~~~~~~~s~~~ 210 (267)
T 3rft_A 199 GCPVVWGASAND 210 (267)
T ss_dssp CSCEEEECCCCT
T ss_pred CceEEEEeCCCC
Confidence 4 5788887653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-28 Score=272.85 Aligned_cols=281 Identities=15% Similarity=0.125 Sum_probs=206.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhc-CCeE-------------------eeeeccCCChhH-HHHHHHhcCCCeEEEcce
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDK-GIAF-------------------EFGTGRLEDKNS-LLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~d~~d~~~-~~~~~~~~~~d~Vih~a~ 428 (684)
++|+|||||||||||++|+++|+++ |++| .++.+|++|.++ +..+++++ |+|||+||
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~--D~Vih~Aa 391 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVA 391 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHC--SEEEECCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCC--CEEEECce
Confidence 4579999999999999999999998 7866 356678888765 77788876 99999999
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCC------CCCCCh
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP------NFTRSF 502 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~------~~p~~~ 502 (684)
.. .......++...+++|+.++.+++++|.+.+.++||+||.++|+.....+ ++|+++. ..|.+.
T Consensus 392 ~~---~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~------~~E~~~~~~~~p~~~p~~~ 462 (660)
T 1z7e_A 392 IA---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY------FDEDHSNLIVGPVNKPRWI 462 (660)
T ss_dssp CC---CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSS------BCTTTCCEEECCTTCTTHH
T ss_pred ec---CccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcc------cCCCccccccCcccCCCCC
Confidence 66 23233467788999999999999999999887799999999998765555 6666642 126778
Q ss_pred hhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHHH-------------HHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 503 YSKTKAMVTFLSYL--EIFVLVICIECLINFQVEGL-------------LKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 503 Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
|+.+|..+|.+... ...+.++.+.|+.++++.+. ...+...+..+.++.+++++.+.++|
T Consensus 463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~----- 537 (660)
T 1z7e_A 463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCF----- 537 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEEC-----
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEE-----
Confidence 99999999988544 34466777788877765432 12222223333344556666677777
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC-cccHHHHHHHHHhhcCCcccccCCchh--------
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG-VISHNEILELYKEYIDPQLKWSNFNLE-------- 634 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~-------- 634 (684)
+|++|+|++++.++++. .+++||+++++ .+|+.|+++.+.+.+|.+.....++..
T Consensus 538 ------------i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~ 605 (660)
T 1z7e_A 538 ------------TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605 (660)
T ss_dssp ------------EEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECT
T ss_pred ------------EEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhc
Confidence 99999999999999865 24599999986 899999999999998853221111110
Q ss_pred -Hh-hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 635 -EQ-AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 635 -~~-~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
.. ........ ...+|++|+ .++|.+..+++++|+++++++.++.
T Consensus 606 ~~~~~~~~~~~~-~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~ 653 (660)
T 1z7e_A 606 SSYYGKGYQDVE-HRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_dssp HHHHCTTCCCCS-CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred cccccccccchh-hcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence 00 00001122 567899999 4678777899999999998876654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-28 Score=273.61 Aligned_cols=280 Identities=16% Similarity=0.118 Sum_probs=202.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++..++|+||
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 346899999999999999999999999773 3457899999999999865679999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+|+.. ........+...+++|+.++.+++++|++.++ ++|++||.++|+..... .+..+++|+++.. |.+.|
T Consensus 90 h~A~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~--~~~~~~~E~~~~~-p~~~Y 163 (699)
T 1z45_A 90 HFAGLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRF--PNMIPIPEECPLG-PTNPY 163 (699)
T ss_dssp ECCSCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGS--TTCCSBCTTSCCC-CCSHH
T ss_pred ECCccc---CcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccc--cccCCccccCCCC-CCChH
Confidence 999965 22223456678899999999999999999886 69999999999853221 1112378888877 88999
Q ss_pred hhhhHhHhhhhhHHh----hhhhhhhhhhhhhhHHHH---------------HHhhhhhhc-cccccceec------CCC
Q 035631 504 SKTKAMVTFLSYLEI----FVLVICIECLINFQVEGL---------------LKAYENVCT-LRLRMPISS------DLS 557 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~g------~~~ 557 (684)
+.+|+++|.+..... .+.++.+.|+.++++.+. ...+..... ...++.++| ++.
T Consensus 164 ~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 243 (699)
T 1z45_A 164 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 243 (699)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCC
Confidence 999999998854432 355667777765554321 111111111 112233444 455
Q ss_pred CCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC--------ccceeEecCCCcccHHHHHHHHHhhcCCccccc
Q 035631 558 NPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN--------CRGAWNFTNPGVISHNEILELYKEYIDPQLKWS 629 (684)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--------~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 629 (684)
+.++| ||++|+|++++.++++. .+++||+++++.+|+.|+++.+++.+|.+..+.
T Consensus 244 ~~~~~-----------------i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~ 306 (699)
T 1z45_A 244 PIRDY-----------------IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK 306 (699)
T ss_dssp CEECE-----------------EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-
T ss_pred eeEee-----------------EEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce
Confidence 55666 99999999999998642 246999999999999999999999999764433
Q ss_pred CCchhHhhhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccc
Q 035631 630 NFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
..+.. ..... ...+|++|+ .++|.+..+++++|+++++++.++
T Consensus 307 ~~~~~-----~~~~~-~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~ 351 (699)
T 1z45_A 307 VTGRR-----AGDVL-NLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 351 (699)
T ss_dssp -------------CC-CCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred ecCCC-----CCccc-cccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhC
Confidence 22111 11122 567899999 467778789999999999877543
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=254.05 Aligned_cols=285 Identities=15% Similarity=0.121 Sum_probs=201.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--cccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
|.+|+|||||||||||++|++.|++. |++|++++|+... .+...+. .....+++++.+|+.|.+.+..++...++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~-~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFK-ALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHH-HHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 44579999999999999999999999 7999999997521 1111000 00125789999999999999999955599
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+++.. |+.++.+|+++|++.+.+++||+ | +||.. .+|..+..|.+.|+.
T Consensus 85 d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~-------~~e~~~~~p~~~y~~ 138 (346)
T 3i6i_A 85 DIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGHD-------VNRADPVEPGLNMYR 138 (346)
T ss_dssp CEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC-------TTTCCCCTTHHHHHH
T ss_pred CEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCCC-------CCccCcCCCcchHHH
Confidence 9999999863 67788999999999876899986 3 45532 245556677889999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
+|..+|+++++ .+++++++||++++|.... .+... ......++.+.++++++..++|+|++|+|++++.++..
T Consensus 139 sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~--~~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~ 211 (346)
T 3i6i_A 139 EKRRVRQLVEE----SGIPFTYICCNSIASWPYY--NNIHP-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD 211 (346)
T ss_dssp HHHHHHHHHHH----TTCCBEEEECCEESSCCCS--CC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH----cCCCEEEEEecccccccCc--ccccc-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhC
Confidence 99999998865 5899999999999997531 12111 11122556688889999999999999999999999987
Q ss_pred CC-CCcEEEecC-CCccCHHHHHHHHHHHhCCCCCcceeecc-------CCCCC--------------CcceecCH----
Q 035631 248 GV-IGHVYNVGT-KKERSVLDVAADICTLFKLEPEKTIHYVQ-------DRPFN--------------DHRYFLDD---- 300 (684)
Q Consensus 248 ~~-~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~~~~~~~~~-------~~~~~--------------~~~~~~d~---- 300 (684)
+. .+++|++++ ++.+|+.|+++.+.+.+|.+.+....... ..... .....++.
T Consensus 212 ~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (346)
T 3i6i_A 212 VRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE 291 (346)
T ss_dssp GGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT
T ss_pred ccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC
Confidence 64 478899974 58999999999999999987542211100 01000 00000111
Q ss_pred -HHHHh--cCCcccCCHHHHHHHHHHHHHhCCCc
Q 035631 301 -QKLKR--LGWKEKTPWEEGLKLTLEWYKKNPHW 331 (684)
Q Consensus 301 -~k~~~--lg~~p~~~~~e~i~~~i~~~~~~~~~ 331 (684)
.++++ .++++ ++++|.++++++|++.+.+.
T Consensus 292 ~~~~~~~~p~~~~-t~~~e~l~~~~~~~~~~~~~ 324 (346)
T 3i6i_A 292 DVEVTTLYPEDSF-RTVEECFGEYIVKMEEKQPT 324 (346)
T ss_dssp EEEHHHHSTTCCC-CCHHHHHHHHHCC-------
T ss_pred cccHHHhCCCCCc-CcHHHHHHHHHHHhhccccc
Confidence 12333 46666 48999999999999887654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=235.14 Aligned_cols=207 Identities=21% Similarity=0.265 Sum_probs=169.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCC-HHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC-ADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~Vi 91 (684)
||||||||||+||+++++.|+++ |++|++++|+.. .... ..+++++.+|+.| .+++.+++ .++|+||
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~--~~~~------~~~~~~~~~D~~d~~~~~~~~~--~~~d~vi 68 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVE--QVPQ------YNNVKAVHFDVDWTPEEMAKQL--HGMDAII 68 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGG--GSCC------CTTEEEEECCTTSCHHHHHTTT--TTCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCcc--chhh------cCCceEEEecccCCHHHHHHHH--cCCCEEE
Confidence 58999999999999999999999 899999999752 1111 1689999999999 99999998 6899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+..... .+++|+.++.+++++|++.+ +++||++||..+|+.... .| .+..|.+.|+.+|.+
T Consensus 69 ~~ag~~~~~--------~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~------~e-~~~~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 69 NVSGSGGKS--------LLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKW------IG-AGFDALKDYYIAKHF 132 (219)
T ss_dssp ECCCCTTSS--------CCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGC------CS-HHHHHTHHHHHHHHH
T ss_pred ECCcCCCCC--------cEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcc------cc-cccccccHHHHHHHH
Confidence 999976522 45678999999999999987 899999999877754321 23 445667899999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-C
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-I 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~ 250 (684)
+|.+++ +..+++++++||+++||+.... .+.. +...+++++++|+|++++.++.++. .
T Consensus 133 ~e~~~~---~~~~i~~~ilrp~~v~g~~~~~---------------~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~ 191 (219)
T 3dqp_A 133 ADLYLT---KETNLDYTIIQPGALTEEEATG---------------LIDI---NDEVSASNTIGDVADTIKELVMTDHSI 191 (219)
T ss_dssp HHHHHH---HSCCCEEEEEEECSEECSCCCS---------------EEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHH---hccCCcEEEEeCceEecCCCCC---------------cccc---CCCcCCcccHHHHHHHHHHHHhCcccc
Confidence 999986 4569999999999999985421 1111 2566799999999999999998764 4
Q ss_pred CcEEEecCCCccCHHHHHH
Q 035631 251 GHVYNVGTKKERSVLDVAA 269 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e~~~ 269 (684)
+++||+++++ .++.|+.+
T Consensus 192 g~~~~i~~g~-~~~~e~~~ 209 (219)
T 3dqp_A 192 GKVISMHNGK-TAIKEALE 209 (219)
T ss_dssp TEEEEEEECS-EEHHHHHH
T ss_pred CcEEEeCCCC-ccHHHHHH
Confidence 7899998775 89998876
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-28 Score=263.70 Aligned_cols=271 Identities=12% Similarity=0.041 Sum_probs=189.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeee----------ccCCChhHHHHHHHhcCCCeEEEcceecCCCCcccccc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT----------GRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCES 440 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~----------~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 440 (684)
+|+|||||||||||++|+++|+++|++|..+. +|+.+ .+.+.+.++ |+|||||+.... ..+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~--~~~~~l~~~--D~Vih~A~~~~~--~~~~~~ 220 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLN--PASDLLDGA--DVLVHLAGEPIF--GRFNDS 220 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTS--CCTTTTTTC--SEEEECCCC-------CCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccc--hhHHhcCCC--CEEEECCCCccc--cccchh
Confidence 57999999999999999999999999985543 34443 234455555 999999996521 145567
Q ss_pred chhhHhhhchhhhHHHHHH-HHHcCC-eEEEEecceeee-cCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh-hH
Q 035631 441 HRVETIRTNVMGTLTLADV-CKEKNV-LLMNFATGCIYE-YDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS-YL 516 (684)
Q Consensus 441 ~~~~~~~~nv~~~~~ll~~-~~~~~~-~~i~~SS~~vy~-~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~-~~ 516 (684)
++..++++|+.++.+|+++ ++..++ ++||+||++||| .....+ ++|+++. |.+.|+.+|..+|.+. +.
T Consensus 221 ~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~------~~E~~~~--~~~~y~~~~~~~E~~~~~~ 292 (516)
T 3oh8_A 221 HKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI------LTEESES--GDDFLAEVCRDWEHATAPA 292 (516)
T ss_dssp GHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE------ECTTSCC--CSSHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc------cCCCCCC--CcChHHHHHHHHHHHHHHH
Confidence 7888999999999999999 555566 699999999998 333344 7777765 7789999999999773 44
Q ss_pred HhhhhhhhhhhhhhhhHHH--HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHh
Q 035631 517 EIFVLVICIECLINFQVEG--LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMAR 594 (684)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~ 594 (684)
...+.++.+.|+..+++.+ ....+...+..+. ..++|++.+.++| ||++|+|++++.+++
T Consensus 293 ~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~-~~~~g~g~~~~~~-----------------i~v~Dva~ai~~~l~ 354 (516)
T 3oh8_A 293 SDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGL-GGKFGDGTSWFSW-----------------IAIDDLTDIYYRAIV 354 (516)
T ss_dssp HHTTCEEEEEEECEEEBTTBSHHHHHHHTTC----CCCCTTSCCEECE-----------------EEHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCC-CcccCCCCceEce-----------------EeHHHHHHHHHHHHh
Confidence 4557788888888777653 3333333332222 2356777888888 999999999999998
Q ss_pred cC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhh----hh--hccCCCCCcCCchhh-hhcCCCc-hhHH
Q 035631 595 RN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQA----KV--LVAPRSNNHMDVTKL-KKEFPEV-LSIK 665 (684)
Q Consensus 595 ~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----~~--~~~~~~~~~~d~~kl-~~~~~~~-~~~~ 665 (684)
++ ..|+||+++++.+|+.|+++.+++.+|.+. ..+++..... .. ......+..++++|+ +++|.+. ++|+
T Consensus 355 ~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~ 433 (516)
T 3oh8_A 355 DAQISGPINAVAPNPVSNADMTKILATSMHRPA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIG 433 (516)
T ss_dssp CTTCCEEEEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHH
T ss_pred CcccCCcEEEECCCCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHH
Confidence 76 678999999999999999999999999754 2222222111 00 000012456788999 7788855 4599
Q ss_pred HHHHHHHhh
Q 035631 666 DSIIKYVLE 674 (684)
Q Consensus 666 ~~l~~~~~~ 674 (684)
++|+++++.
T Consensus 434 e~l~~~l~~ 442 (516)
T 3oh8_A 434 AAIAHELGY 442 (516)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCc
Confidence 999999865
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=229.43 Aligned_cols=217 Identities=15% Similarity=0.213 Sum_probs=171.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCCHHHHHHhhccCC
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
..+++|+||||||||+||++++++|+++ |++|++++|+.. ....+. ..++ +++.+|+. +.+.+++ .+
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~--~~~~~~----~~~~~~~~~~Dl~--~~~~~~~--~~ 84 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEE--QGPELR----ERGASDIVVANLE--EDFSHAF--AS 84 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGG--GHHHHH----HTTCSEEEECCTT--SCCGGGG--TT
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChH--HHHHHH----hCCCceEEEcccH--HHHHHHH--cC
Confidence 4556799999999999999999999999 899999999753 221111 1367 99999998 6666777 69
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhH
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 166 (684)
+|+|||+||... ..++...+++|+.++.+++++|++.+ +++||++||...+.. +..+ .+.+.|+
T Consensus 85 ~D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~----------~~~~-~~~~~Y~ 148 (236)
T 3e8x_A 85 IDAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP----------DQGP-MNMRHYL 148 (236)
T ss_dssp CSEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG----------GGSC-GGGHHHH
T ss_pred CCEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC----------CCCh-hhhhhHH
Confidence 999999999754 25688899999999999999999987 899999999544321 1111 4567899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
.+|.++|.+++ ..+++++++||++++|+... ..+.....+...+++++++|+|+++..++.
T Consensus 149 ~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~---------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 209 (236)
T 3e8x_A 149 VAKRLADDELK----RSSLDYTIVRPGPLSNEEST---------------GKVTVSPHFSEITRSITRHDVAKVIAELVD 209 (236)
T ss_dssp HHHHHHHHHHH----HSSSEEEEEEECSEECSCCC---------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH----HCCCCEEEEeCCcccCCCCC---------------CeEEeccCCCcccCcEeHHHHHHHHHHHhc
Confidence 99999999886 56999999999999998531 123333455556899999999999999998
Q ss_pred cC-CCCcEEEecCCCccCHHHHHHHHH
Q 035631 247 RG-VIGHVYNVGTKKERSVLDVAADIC 272 (684)
Q Consensus 247 ~~-~~~~~~ni~~~~~~t~~e~~~~i~ 272 (684)
++ ..+++|+++++ ..++.|+++.+.
T Consensus 210 ~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 210 QQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp CGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred CccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 76 46789999887 599999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-27 Score=248.80 Aligned_cols=270 Identities=10% Similarity=0.076 Sum_probs=185.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------ee-eccCCChhHHHHHHHhcCCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FG-TGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~-~~d~~d~~~~~~~~~~~~~d~V 423 (684)
+.|+||||||+||||++|+++|+++|++|. ++ .+|++|.+.+.++++++ |+|
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA--AGV 87 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC--SEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC--CEE
Confidence 346999999999999999999999999772 23 68999999888888765 999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHH-cCC-eEEEEecceeeecCCCCCCCCCCCCccCCC------
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE-KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE------ 495 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~------ 495 (684)
||+|+.. .. ..++...+++|+.++.+++++|.+ .++ ++||+||.++|+..... ....+++|++.
T Consensus 88 ih~A~~~---~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 88 AHIASVV---SF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN--VEGIYLDEKSWNLESID 159 (342)
T ss_dssp EECCCCC---SC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTT--CCCCEECTTCCCHHHHH
T ss_pred EEeCCCC---CC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCC--CCCcccCccccCchhhh
Confidence 9999965 21 246778999999999999999985 454 79999999998643210 01123677662
Q ss_pred ----------CCCCCChhhhhhHhHhhhhhHHhh----hhhhhhhhhhhhhHHHH--------HHhhhhhhcccccccee
Q 035631 496 ----------PNFTRSFYSKTKAMVTFLSYLEIF----VLVICIECLINFQVEGL--------LKAYENVCTLRLRMPIS 553 (684)
Q Consensus 496 ----------~~~p~~~Y~~sK~~~E~~~~~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 553 (684)
.. |.+.|+.+|+.+|.+.+.... +..+.+.|+.++++++. ...+...+..+.++.++
T Consensus 160 ~~~~~~~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T 1y1p_A 160 KAKTLPESDPQK-SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL 238 (342)
T ss_dssp HHHHSCTTSTTH-HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred hhcccccccccc-chHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccc
Confidence 23 668899999999988544332 23344556655443321 11111222222222223
Q ss_pred cCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCc
Q 035631 554 SDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFN 632 (684)
Q Consensus 554 g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 632 (684)
+++ +.++| +|++|+|++++.+++++ ..|.+++++++.+|+.|+++.+.+.+|.. .+. ..
T Consensus 239 ~~~-~~~~~-----------------v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~~-~~ 298 (342)
T 1y1p_A 239 ALM-PPQYY-----------------VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TFP-AD 298 (342)
T ss_dssp HTC-CSEEE-----------------EEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CCC-CC
T ss_pred ccC-CcCCE-----------------eEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cCC-CC
Confidence 333 34455 99999999999999865 44544456778899999999999999864 221 11
Q ss_pred hhHhhhhhccCCCCCcCCchhhh--hcC---CCchhHHHHHHHHHhhcc
Q 035631 633 LEEQAKVLVAPRSNNHMDVTKLK--KEF---PEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 633 ~~~~~~~~~~~~~~~~~d~~kl~--~~~---~~~~~~~~~l~~~~~~~~ 676 (684)
. +. ..+. ...+|++|++ ++| ....+++++|++++++++
T Consensus 299 ~---~~--~~~~-~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 299 F---PD--QGQD-LSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp C---CC--CCCC-CCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred C---Cc--cccc-cccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 1 00 1112 3567999983 344 356799999999998764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-27 Score=245.81 Aligned_cols=275 Identities=14% Similarity=0.130 Sum_probs=178.1
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------eeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------FGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
|+|+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.++++++ |+||
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~Vi 85 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGC--DFVF 85 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTC--SEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCC--CEEE
Confidence 357999999999999999999999999762 3457888888888888877 9999
Q ss_pred EcceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHcC-C-eEEEEecce-eeecCCCCCCCCCCCCccCCCCC---
Q 035631 425 NAAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEKN-V-LLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPN--- 497 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~--- 497 (684)
|+|+.. . ....++ ..++++|+.|+.+++++|.+.+ + ++||+||++ +|+...... ..+++|+++..
T Consensus 86 h~A~~~---~--~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~---~~~~~E~~~~~~~~ 157 (338)
T 2rh8_A 86 HVATPV---H--FASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGT---GLVVDEKNWTDIEF 157 (338)
T ss_dssp EESSCC---C--C---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCS---CCCCCTTTTTCC--
T ss_pred EeCCcc---C--CCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCC---CcccChhhccchhh
Confidence 999854 1 122333 3489999999999999999985 5 699999987 454221100 01255554211
Q ss_pred ----CC-CChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 498 ----FT-RSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 498 ----~p-~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.| ...|+.||.++|.+.+.. ..+.++.+.|+.++++++.......... .+...+.+.
T Consensus 158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~----------------~~~~~~~g~ 221 (338)
T 2rh8_A 158 LTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIG----------------LAMSLITGN 221 (338)
T ss_dssp -----CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHH----------------HHHHHHHTC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHH----------------HHHHHHcCC
Confidence 02 226999999999885443 3456677777776654432111000000 000000110
Q ss_pred cc-cc--------cC-CCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhh
Q 035631 571 KV-VN--------IP-NSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKV 639 (684)
Q Consensus 571 ~~-~~--------~~-~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 639 (684)
.. .. .. .+++|++|+|++++.+++++ ..|.||+++ +.+|+.|+++.+.+.++.. .++ ......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~-~~~-~~~~~~--- 295 (338)
T 2rh8_A 222 EFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQY-KVP-TDFGDF--- 295 (338)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTS-CCC-CCCTTS---
T ss_pred ccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCC-CCC-CCCCCC---
Confidence 00 00 00 14599999999999999865 467898865 5799999999999877521 111 100000
Q ss_pred hccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 640 LVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 640 ~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
.... ...+|++|+ +++|.+..+++++|+++++++.+.
T Consensus 296 -~~~~-~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 296 -PPKS-KLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAK 333 (338)
T ss_dssp -CSSC-SCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHT
T ss_pred -CcCc-ceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHc
Confidence 1111 367899999 778887779999999999877543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=240.99 Aligned_cols=277 Identities=14% Similarity=0.061 Sum_probs=191.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC-----CeE-----------------eeeeccCCChhHHHHHHHhcC-CCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG-----IAF-----------------EFGTGRLEDKNSLLDDMKRVR-PTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g-----~~v-----------------~~~~~d~~d~~~~~~~~~~~~-~d~Vih~a~ 428 (684)
|+|||||||||||++|+++|+++| ++| +++.+|++|.+.+.+++++.+ +|+|||+|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 699999999999999999999999 766 356689999999999998855 699999999
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHc--CC-eEE-------EEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK--NV-LLM-------NFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~-~~i-------~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
.. ..++...+++|+.++.+++++|++. ++ ++| |+||.+|||.... ...+++|+++...
T Consensus 82 ~~--------~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~----~~~~~~E~~~~~~ 149 (364)
T 2v6g_A 82 AN--------RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIES----HDPPYTEDLPRLK 149 (364)
T ss_dssp CC--------CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCC----CCSSBCTTSCCCS
T ss_pred CC--------cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcccccc----CCCCCCccccCCc
Confidence 54 2457789999999999999999997 56 476 7999999986421 1123788887662
Q ss_pred CCChhhhhhHhHhhhhhHHh--hh-hhhhhhhhhhhhHHHHHH-------h-hhhhh--ccccccceecCCCCCchHHHH
Q 035631 499 TRSFYSKTKAMVTFLSYLEI--FV-LVICIECLINFQVEGLLK-------A-YENVC--TLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-------~-~~~~~--~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+.+.| +.+|.+..... .+ .++.+.|+..+++++... . +...+ ..+.++.+.|++.+.++|
T Consensus 150 ~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~--- 222 (364)
T 2v6g_A 150 YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGY--- 222 (364)
T ss_dssp SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSC---
T ss_pred cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccccc---
Confidence 26678 34676643332 33 666777777665433210 0 01111 112222333333211111
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC-c-cceeEecCCCcccHHHHHHHHHhhcCCccccc--CCchh-------
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN-C-RGAWNFTNPGVISHNEILELYKEYIDPQLKWS--NFNLE------- 634 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~------- 634 (684)
.+++|++|+|++++.+++++ . +++||+++++.+|+.|+++.+.+.+|.+.... .++..
T Consensus 223 -----------~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~ 291 (364)
T 2v6g_A 223 -----------SDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKG 291 (364)
T ss_dssp -----------BCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTT
T ss_pred -----------CCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhh
Confidence 14488899999999999876 3 44999999999999999999999999754322 22211
Q ss_pred -----Hh--------hhhhccC----------CCC-CcCCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 635 -----EQ--------AKVLVAP----------RSN-NHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 635 -----~~--------~~~~~~~----------~~~-~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
+. +....+. ... ..+|++|+ +++|.+..+++++|+++++++.+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 292 KEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp CHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 0000000 024 58899999 666767789999999999887654
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-26 Score=225.80 Aligned_cols=232 Identities=20% Similarity=0.193 Sum_probs=174.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+++|+||||||+|+||++++++|++++.|++|++++|+.. ....+ ..+++++.+|+.|.+++.+++ .++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~--~~~~~-----~~~~~~~~~D~~d~~~~~~~~--~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKI-----GGEADVFIGDITDADSINPAF--QGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH--HHHHT-----TCCTTEEECCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC--chhhc-----CCCeeEEEecCCCHHHHHHHH--cCCCE
Confidence 3568999999999999999999999965799999999642 22222 346889999999999999998 68999
Q ss_pred EEEcCccCCcC-------------CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 90 IMHFAAQTHVD-------------NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 90 Vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
|||+|+..... ..+++....+++|+.++.+++++|++.+ +++||++||..++...
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~----------- 140 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPD----------- 140 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTT-----------
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCC-----------
Confidence 99999975321 1112223567999999999999999987 8999999998875321
Q ss_pred CCCC--CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 157 SQLL--PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 157 ~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.+.. ..+.|+.+|..+|.+++. .+++++++||+.+||+......++ .+....+++. ..+++++
T Consensus 141 ~~~~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~ 205 (253)
T 1xq6_A 141 HPLNKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQT---DTKTVPR 205 (253)
T ss_dssp CGGGGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGGS---SCCEEEH
T ss_pred CccccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhh--------ccCCcCCcCC---CCcEEcH
Confidence 1111 124588899999998853 689999999999999864221111 0000011111 2468999
Q ss_pred HHHHHHHHHHHhcCC-CCcEEEecCCC---ccCHHHHHHHHHHHhCC
Q 035631 235 ADVAEAFDVILHRGV-IGHVYNVGTKK---ERSVLDVAADICTLFKL 277 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~-~~~~~ni~~~~---~~t~~e~~~~i~~~~g~ 277 (684)
+|+|++++.++.++. .+++||+++++ ++|+.|+++.+.+.+|.
T Consensus 206 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 206 ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 999999999998754 47799999864 59999999999998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-26 Score=219.45 Aligned_cols=218 Identities=17% Similarity=0.150 Sum_probs=144.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||+++++.|+++ |++|++++|+.. ....+. ++++++.+|+.|.+. +.+ .++|+|||
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~--~~~~~~-----~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAG--KITQTH-----KDINILQKDIFDLTL--SDL--SDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSH--HHHHHC-----SSSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCch--hhhhcc-----CCCeEEeccccChhh--hhh--cCCCEEEE
Confidence 58999999999999999999999 899999999752 222221 578999999999887 566 78999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+.... ....|+.++++++++|++.+ ++++|++||..+|...... ....++.+..|.+.|+.+|...
T Consensus 68 ~ag~~~~---------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~~~~~~~~~~~y~~~k~~~ 135 (221)
T 3ew7_A 68 AYGISPD---------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDG--NTLLESKGLREAPYYPTARAQA 135 (221)
T ss_dssp CCCSSTT---------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC---------------------CCCSCCHHHHH
T ss_pred CCcCCcc---------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCC--ccccccCCCCCHHHHHHHHHHH
Confidence 9997431 13458999999999999986 8999999998776443321 1224556677788899999999
Q ss_pred HHHHHHHHH-hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-C
Q 035631 173 EMLVMAYHR-SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-I 250 (684)
Q Consensus 173 E~~~~~~~~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~ 250 (684)
|.+ ..+.. ..+++++++||+++||++.....+ ...+..+.+.+++ .++++++|+|++++.+++++. .
T Consensus 136 e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~ 204 (221)
T 3ew7_A 136 KQL-EHLKSHQAEFSWTYISPSAMFEPGERTGDY-------QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHL 204 (221)
T ss_dssp HHH-HHHHTTTTTSCEEEEECSSCCCCC-------------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred HHH-HHHHhhccCccEEEEeCcceecCCCccCce-------EeccccceecCCC---CceEeHHHHHHHHHHHHhCcccc
Confidence 986 33333 679999999999999984321111 1122333333333 368999999999999998865 5
Q ss_pred CcEEEecCCCccCHHH
Q 035631 251 GHVYNVGTKKERSVLD 266 (684)
Q Consensus 251 ~~~~ni~~~~~~t~~e 266 (684)
++.||++++...+..|
T Consensus 205 g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 205 NEHFTVAGKLEHHHHH 220 (221)
T ss_dssp TSEEECCC--------
T ss_pred CCEEEECCCCcccccc
Confidence 7899999887766554
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-26 Score=221.47 Aligned_cols=220 Identities=10% Similarity=0.011 Sum_probs=161.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||++++++|+++ |++|++++|+.. ....+ ...+++++.+|+.|.+. ..+ .++|+|||
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~--~~~~~----~~~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQ--KAADR----LGATVATLVKEPLVLTE--ADL--DSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHH----TCTTSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEeccc--ccccc----cCCCceEEecccccccH--hhc--ccCCEEEE
Confidence 57999999999999999999999 899999999742 22222 12578999999999887 556 78999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+..... .....|+.++++++++|++.+ ++||++||.+.+...........++...+.|.+.|+.+|...
T Consensus 69 ~ag~~~~~-------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 139 (224)
T 3h2s_A 69 ALSVPWGS-------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY 139 (224)
T ss_dssp CCCCCTTS-------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred CCccCCCc-------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence 99975211 124679999999999999987 899999998665443322111223444455688999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-CC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-IG 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~ 251 (684)
|. +..+.+..+++++++||+++||++.... +. .....+.. +...+++++++|+|++++.+++++. .+
T Consensus 140 e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g 207 (224)
T 3h2s_A 140 YE-YQFLQMNANVNWIGISPSEAFPSGPATS-YV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR 207 (224)
T ss_dssp HH-HHHHTTCTTSCEEEEEECSBCCCCCCCC-EE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred HH-HHHHHhcCCCcEEEEcCccccCCCcccC-ce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccC
Confidence 94 4455556799999999999999854321 10 11112221 2344689999999999999998865 57
Q ss_pred cEEEecCCCccCHH
Q 035631 252 HVYNVGTKKERSVL 265 (684)
Q Consensus 252 ~~~ni~~~~~~t~~ 265 (684)
++|++++.+...+.
T Consensus 208 ~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 208 DRIVVRDADLEHHH 221 (224)
T ss_dssp SEEEEEECC-----
T ss_pred CEEEEecCcchhcc
Confidence 89999987665543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=237.71 Aligned_cols=272 Identities=14% Similarity=0.116 Sum_probs=180.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe--------------------------eeeccCCChhHHHHHHHhcCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------------------FGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
+++||||||+||||++|+++|+++|++|. ++.+|++|.+++.++++++ |+||
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC--TGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC--SEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC--CEEE
Confidence 35899999999999999999999999762 3456889999999999877 9999
Q ss_pred EcceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHcC-C-eEEEEecce-eeecCCCCCCCCCCCCccCCCCC---
Q 035631 425 NAAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEKN-V-LLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPN--- 497 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~--- 497 (684)
|+|+.. .....++ ...+++|+.++.+++++|.+.+ + ++||+||++ +|+..... .+++|+++..
T Consensus 83 h~A~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~-----~~~~E~~~~~~~~ 152 (337)
T 2c29_D 83 HVATPM-----DFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQL-----PVYDESCWSDMEF 152 (337)
T ss_dssp ECCCCC-----CSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCC-----SEECTTCCCCHHH
T ss_pred Eecccc-----CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCC-----cccCcccCCchhh
Confidence 999854 1222333 3689999999999999999876 5 699999997 55432211 1255554321
Q ss_pred -----CCCChhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 498 -----FTRSFYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 498 -----~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.|.+.|+.||.++|.+.+.. ..+.++.+.|+.++++++....+........ ..+.+.
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~----------------~~~~g~ 216 (337)
T 2c29_D 153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL----------------SPITGN 216 (337)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT----------------HHHHTC
T ss_pred hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH----------------HHHcCC
Confidence 14457999999999885443 3456666777776654432111100000000 000010
Q ss_pred ccc-c--cCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCC
Q 035631 571 KVV-N--IPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSN 646 (684)
Q Consensus 571 ~~~-~--~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 646 (684)
... . ....++|++|+|++++.+++++ ..|.|++++ +.+|+.|+++.+.+.++. ...+ ..... ...... .
T Consensus 217 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~-~~~~-~~~~~---~~~~~~-~ 289 (337)
T 2c29_D 217 EAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPE-YNIP-TEFKG---VDENLK-S 289 (337)
T ss_dssp GGGHHHHTEEEEEEHHHHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTT-SCCC-SCCTT---CCTTCC-C
T ss_pred CccccccCCCCEEEHHHHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCC-ccCC-CCCCc---ccCCCc-c
Confidence 000 0 0013599999999999999875 456887655 578999999999987742 1111 10000 001112 5
Q ss_pred CcCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 647 NHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 647 ~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
..+|++|+ .++|.+..+++++|+++++++.+
T Consensus 290 ~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~ 321 (337)
T 2c29_D 290 VCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRA 321 (337)
T ss_dssp CEECCHHHHHHTCCCCCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHcCCCcCCCHHHHHHHHHHHHHH
Confidence 67899999 67888888899999999987654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-26 Score=221.78 Aligned_cols=206 Identities=18% Similarity=0.181 Sum_probs=161.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCc--EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDY--EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
|+|+||||||||+||++++++|+++ |+ +|++++|+... ..++++++.+|+.|.+.+.+++ +|
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~----~d 67 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS----ID 67 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC----CS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh----hc
Confidence 5689999999999999999999999 66 99999997531 1346788889998877766554 99
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
+|||+|+.... ...++...+++|+.++.+++++|++.+ +++||++||..+|+. |.+.|+.+
T Consensus 68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~----------------~~~~y~~s 128 (215)
T 2a35_A 68 TAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------SSIFYNRV 128 (215)
T ss_dssp EEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHH
T ss_pred EEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC----------------CccHHHHH
Confidence 99999997542 235677889999999999999999987 889999999988852 34689999
Q ss_pred HHHHHHHHHHHHHhcCCC-EEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 169 KAGAEMLVMAYHRSYGLP-TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
|.+.|.+++. .+++ ++++||+++||+.... .++..+ . ....++ .+ ..++++|++|+|+++..++++
T Consensus 129 K~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~-~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~ 195 (215)
T 2a35_A 129 KGELEQALQE----QGWPQLTIARPSLLFGPREEF-RLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALE 195 (215)
T ss_dssp HHHHHHHHTT----SCCSEEEEEECCSEESTTSCE-EGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH----cCCCeEEEEeCceeeCCCCcc-hHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhc
Confidence 9999999864 4899 9999999999997531 222211 1 111222 22 257999999999999999988
Q ss_pred CCCCcEEEecCCCccCHH
Q 035631 248 GVIGHVYNVGTKKERSVL 265 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~ 265 (684)
+. +++||+++++..++.
T Consensus 196 ~~-~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 196 EG-KGVRFVESDELRKLG 212 (215)
T ss_dssp CC-SEEEEEEHHHHHHHH
T ss_pred CC-CCceEEcHHHHHHhh
Confidence 76 789999987665543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-26 Score=232.89 Aligned_cols=271 Identities=15% Similarity=0.159 Sum_probs=178.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee---------------------------eeccCCChhHHHHHHHhcCCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF---------------------------GTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~---------------------------~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|||||||||||++|+++|+++|++|.. +.+|++|.+.+.++++++ |+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC--VGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC--SEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC--CEEE
Confidence 58999999999999999999999998732 236888999999999877 9999
Q ss_pred EcceecCCCCccccccch-hhHhhhchhhhHHHHHHHHHc-CC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC----
Q 035631 425 NAAGITGRPNVDWCESHR-VETIRTNVMGTLTLADVCKEK-NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN---- 497 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~~~~~~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~---- 497 (684)
|+|+.. .....++ ..++++|+.++.+++++|.+. ++ ++||+||.+++...... ..+++|+++..
T Consensus 80 h~A~~~-----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~e~~~~~~~~~ 150 (322)
T 2p4h_X 80 HTASPI-----DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD----KDVLDESDWSDVDLL 150 (322)
T ss_dssp ECCCCC-------------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC----CSEECTTCCCCHHHH
T ss_pred EcCCcc-----cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC----CeecCCccccchhhh
Confidence 999732 2223333 458999999999999999987 55 69999999844322111 11256655321
Q ss_pred ---CCCC-hhhhhhHhHhhhhhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHH---Hhhh
Q 035631 498 ---FTRS-FYSKTKAMVTFLSYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVT---KLAR 568 (684)
Q Consensus 498 ---~p~~-~Y~~sK~~~E~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~ 568 (684)
.|.+ .|+.||.++|.+.... ..+.++.+.|+.++++++....+. .++. ..+.
T Consensus 151 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~-------------------~~~~~~~~~~~ 211 (322)
T 2p4h_X 151 RSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLP-------------------DSIEKALVLVL 211 (322)
T ss_dssp HHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCC-------------------HHHHHHTHHHH
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCC-------------------chHHHHHHHHh
Confidence 1333 6999999999885443 345666677776554432110000 0110 0111
Q ss_pred cccc-cccCC-CccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCC
Q 035631 569 YNKV-VNIPN-SMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRS 645 (684)
Q Consensus 569 ~~~~-~~~~~-~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 645 (684)
+... +.... +++|++|+|++++.+++++ ..|.|| ++++.+|+.|+++.+.+.++. ..++. .. .... .....
T Consensus 212 g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~-~~~~~-~~-~~~~-~~~~~- 285 (322)
T 2p4h_X 212 GKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPE-YQILT-VD-ELKE-IKGAR- 285 (322)
T ss_dssp SCGGGCCEEEEEEEEHHHHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTT-SCCCC-TT-TTTT-CCCEE-
T ss_pred CCCccCcCCCcCEEEHHHHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCC-CCCCC-Cc-cccC-CCCCc-
Confidence 1110 00011 4599999999999999765 457899 667899999999999887642 11111 00 0000 00112
Q ss_pred CCcCCchhh-hhcCCCchhHHHHHHHHHhhcccc
Q 035631 646 NNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 646 ~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
...+|++|+ +++|.+..+++++|+++++++.++
T Consensus 286 ~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 286 LPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEK 319 (322)
T ss_dssp CCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred ceecccHHHHHhCCccCCCHHHHHHHHHHHHHhc
Confidence 567899999 778877779999999999877543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=226.05 Aligned_cols=228 Identities=14% Similarity=0.153 Sum_probs=175.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+|+||||||||+||+++++.|+++ | ++|++++|++.......+. ..+++++.+|+.|.+.+..++ .++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~~--~~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELR----LQGAEVVQGDQDDQVIMELAL--NGAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHH----HTTCEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHH----HCCCEEEEecCCCHHHHHHHH--hcCCEE
Confidence 579999999999999999999999 6 9999999975321111111 246899999999999999999 789999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
||+++..... ....|+.++++++++|++.+ +++||++||..+|+.... .+...|+.+|.
T Consensus 77 i~~a~~~~~~--------~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~------------~~~~~y~~sK~ 135 (299)
T 2wm3_A 77 FIVTNYWESC--------SQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAG------------RLAAAHFDGKG 135 (299)
T ss_dssp EECCCHHHHT--------CHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTT------------SCCCHHHHHHH
T ss_pred EEeCCCCccc--------cchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCC------------cccCchhhHHH
Confidence 9999853210 13567889999999999987 899999998888763211 13467999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEE-ecCCCceEecccHHHHHHHHHHHHhcC-
Q 035631 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI-HGNGSNVRSYLYCADVAEAFDVILHRG- 248 (684)
Q Consensus 171 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~i~~~~~~~- 248 (684)
.+|.+++. .+++++++||+++||+... .+++. ....++...+ .+.++..++|+|++|+|+++..++.++
T Consensus 136 ~~e~~~~~----~gi~~~ilrp~~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~ 206 (299)
T 2wm3_A 136 EVEEYFRD----IGVPMTSVRLPCYFENLLS--HFLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE 206 (299)
T ss_dssp HHHHHHHH----HTCCEEEEECCEEGGGGGT--TTCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH
T ss_pred HHHHHHHH----CCCCEEEEeecHHhhhchh--hcCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh
Confidence 99999864 4899999999999997431 11110 0112222122 234677889999999999999999864
Q ss_pred -CCCcEEEecCCCccCHHHHHHHHHHHhCCC
Q 035631 249 -VIGHVYNVGTKKERSVLDVAADICTLFKLE 278 (684)
Q Consensus 249 -~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~ 278 (684)
..+++|++++ +.+|+.|+++.+.+.+|.+
T Consensus 207 ~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 207 KYVGQNIGLST-CRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp HHTTCEEECCS-EEECHHHHHHHHHHHHSSC
T ss_pred hhCCeEEEeee-ccCCHHHHHHHHHHHHCCC
Confidence 2578999986 6899999999999999975
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=215.86 Aligned_cols=218 Identities=20% Similarity=0.163 Sum_probs=166.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||+++++.|++.+ |++|++++|++.. ...+ ...+++++.+|+.|.+.+..++ .++|+|||
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~R~~~~--~~~~----~~~~v~~~~~D~~d~~~l~~~~--~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH-IDHFHIGVRNVEK--VPDD----WRGKVSVRQLDYFNQESMVEAF--KGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CTTEEEEESSGGG--SCGG----GBTTBEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC-CCcEEEEECCHHH--HHHh----hhCCCEEEEcCCCCHHHHHHHH--hCCCEEEE
Confidence 579999999999999999988863 6899999997531 1111 2357999999999999999999 79999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+.... ...|+.++++++++|++.+ +++|||+||.+. . +..+ ..+...+..+
T Consensus 72 ~a~~~~~----------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~---------~~~~----~~~~~~~~~~ 124 (289)
T 3e48_A 72 IPSIIHP----------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---Q---------HNNP----FHMSPYFGYA 124 (289)
T ss_dssp CCCCCCS----------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---S---------TTCC----STTHHHHHHH
T ss_pred eCCCCcc----------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---C---------CCCC----CccchhHHHH
Confidence 9986432 1347899999999999988 899999999432 1 1111 1123333445
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC-C
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI-G 251 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~-~ 251 (684)
|..+ .+.+++++++||+++||+. ... +........ ...+.++..++|++++|+|+++..++.++.. +
T Consensus 125 e~~~----~~~g~~~~ilrp~~~~~~~------~~~-~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g 192 (289)
T 3e48_A 125 SRLL----STSGIDYTYVRMAMYMDPL------KPY-LPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTWG 192 (289)
T ss_dssp HHHH----HHHCCEEEEEEECEESTTH------HHH-HHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred HHHH----HHcCCCEEEEecccccccc------HHH-HHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCC
Confidence 5444 3459999999999999862 222 222222232 3346678889999999999999999987653 7
Q ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 252 HVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 252 ~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
++||++ ++.+|+.|+++.+.+.+|.+.
T Consensus 193 ~~~~~~-~~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 193 KRYLLS-GYSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp CEEEEC-CEEEEHHHHHHHHHHHHTSCC
T ss_pred ceEEeC-CCcCCHHHHHHHHHHHHCCce
Confidence 899999 999999999999999999754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-25 Score=221.57 Aligned_cols=243 Identities=12% Similarity=0.101 Sum_probs=180.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc--CCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK--GIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~--g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
|+|||||||||||++++++|+++ |++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~- 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGV--SKLLFISGPH- 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECCCCC-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcC--CEEEEcCCCC-
Confidence 58999999999999999999999 8876 45678999999999999876 9999999842
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhH
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMV 510 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~ 510 (684)
. . .++|+.++.+++++|++.++ ++||+||.++|. . | ..|+.+|..+
T Consensus 78 ---~----~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-----------------~---~-~~y~~~K~~~ 124 (287)
T 2jl1_A 78 ---Y----D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-----------------S---I-IPLAHVHLAT 124 (287)
T ss_dssp ---S----C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-----------------C---C-STHHHHHHHH
T ss_pred ---c----C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-----------------C---C-CchHHHHHHH
Confidence 1 1 15799999999999999887 699999987762 0 1 3799999999
Q ss_pred hhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHH
Q 035631 511 TFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAI 590 (684)
Q Consensus 511 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~ 590 (684)
|.+... .+.++.+.|+..+++......+......+ ....+.+...++| +|++|+|++++
T Consensus 125 E~~~~~--~~~~~~ilrp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------------i~~~Dva~~~~ 183 (287)
T 2jl1_A 125 EYAIRT--TNIPYTFLRNALYTDFFVNEGLRASTESG--AIVTNAGSGIVNS-----------------VTRNELALAAA 183 (287)
T ss_dssp HHHHHH--TTCCEEEEEECCBHHHHSSGGGHHHHHHT--EEEESCTTCCBCC-----------------BCHHHHHHHHH
T ss_pred HHHHHH--cCCCeEEEECCEeccccchhhHHHHhhCC--ceeccCCCCccCc-----------------cCHHHHHHHHH
Confidence 987642 46677777777666543122121111111 1123445566677 99999999999
Q ss_pred HHHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh-------------------ccCCCCCcC
Q 035631 591 EMARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL-------------------VAPRSNNHM 649 (684)
Q Consensus 591 ~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 649 (684)
.+++++ .+++||+++++.+|+.|+++.+.+.+|.+..+.+++..+..... .+.. ...+
T Consensus 184 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 262 (287)
T 2jl1_A 184 TVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKG-EASK 262 (287)
T ss_dssp HHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTT-TTCC
T ss_pred HHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC-CCcC
Confidence 999875 34599999999999999999999999987666555543221100 0011 4567
Q ss_pred Cchhh-hhcCCCchhHHHHHHHHHh
Q 035631 650 DVTKL-KKEFPEVLSIKDSIIKYVL 673 (684)
Q Consensus 650 d~~kl-~~~~~~~~~~~~~l~~~~~ 673 (684)
|++|+ +... +..+++++|+++++
T Consensus 263 ~~~~~~~~lG-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 263 TSDDLQKLIG-SLTPLKETVKQALK 286 (287)
T ss_dssp CCSHHHHHHS-SCCCHHHHHHHHHT
T ss_pred CchHHHHHhC-CCCCHHHHHHHHhc
Confidence 88999 4333 88899999999875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=217.01 Aligned_cols=202 Identities=11% Similarity=0.071 Sum_probs=148.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
||+|||||||||||++|+++|+++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~--- 78 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGA--DAVISAFNPG--- 78 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTC--SEEEECCCC----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCC--CEEEEeCcCC---
Confidence 5799999999999999999999999976 56788999999999999976 9999999843
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
... ...+++|+.++.+++++|++.++ ++||+||.++|+..+.. ..|+++.. |.+.|+.+|..+|.
T Consensus 79 -----~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-------~~~~~~~~-p~~~Y~~sK~~~e~ 144 (227)
T 3dhn_A 79 -----WNN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-------RLMDSGEV-PENILPGVKALGEF 144 (227)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-------EGGGTTCS-CGGGHHHHHHHHHH
T ss_pred -----CCC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-------ccccCCcc-hHHHHHHHHHHHHH
Confidence 112 23789999999999999999987 69999999977654332 35566666 88999999999996
Q ss_pred hhh--HHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHH
Q 035631 513 LSY--LEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAI 590 (684)
Q Consensus 513 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~ 590 (684)
+.. ....+.++.+.|+..+++++.... ........++.. + ..++| +|++|+|++++
T Consensus 145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~-~-~~~~~-----------------i~~~Dva~ai~ 202 (227)
T 3dhn_A 145 YLNFLMKEKEIDWVFFSPAADMRPGVRTG---RYRLGKDDMIVD-I-VGNSH-----------------ISVEDYAAAMI 202 (227)
T ss_dssp HHHTGGGCCSSEEEEEECCSEEESCCCCC---CCEEESSBCCCC-T-TSCCE-----------------EEHHHHHHHHH
T ss_pred HHHHHhhccCccEEEEeCCcccCCCcccc---ceeecCCCcccC-C-CCCcE-----------------EeHHHHHHHHH
Confidence 632 224566777777776654432111 011111111111 1 11566 99999999999
Q ss_pred HHHhcC--ccceeEecCCCcccHHH
Q 035631 591 EMARRN--CRGAWNFTNPGVISHNE 613 (684)
Q Consensus 591 ~~~~~~--~~g~~ni~~~~~~s~~e 613 (684)
.+++++ .+++|+++++++.++++
T Consensus 203 ~~l~~~~~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 203 DELEHPKHHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp HHHHSCCCCSEEEEEECCSCCC---
T ss_pred HHHhCccccCcEEEEEeehhcccCC
Confidence 999988 45699999999988763
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=200.72 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=154.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+|+||||||||+||++++++|+++ |++|++++|+... ... ....+++++.+|+.|.+.+.+++ .++|+||
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~--~~~----~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSR--LPS----EGPRPAHVVVGDVLQAADVDKTV--AGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGG--SCS----SSCCCSEEEESCTTSHHHHHHHH--TTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhh--ccc----ccCCceEEEEecCCCHHHHHHHH--cCCCEEE
Confidence 379999999999999999999999 8999999997531 111 11357899999999999999998 6899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+..... .+ .++|+.++.+++++|++.+ +++||++||..+|+..... +.+.+.|+.+|..
T Consensus 73 ~~a~~~~~~-~~------~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~----------~~~~~~y~~~K~~ 134 (206)
T 1hdo_A 73 VLLGTRNDL-SP------TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV----------PPRLQAVTDDHIR 134 (206)
T ss_dssp ECCCCTTCC-SC------CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS----------CGGGHHHHHHHHH
T ss_pred ECccCCCCC-Cc------cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccc----------cccchhHHHHHHH
Confidence 999975431 11 2478999999999999987 8999999999998754321 1155789999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC-C
Q 035631 172 AEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV-I 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~ 250 (684)
+|.+++ +.+++++++||+.+ +++.....+ ......... .++++++|+|+++..+++++. .
T Consensus 135 ~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~-------------~~~~~~~~~-~~~i~~~Dva~~~~~~~~~~~~~ 195 (206)
T 1hdo_A 135 MHKVLR----ESGLKYVAVMPPHI-GDQPLTGAY-------------TVTLDGRGP-SRVISKHDLGHFMLRCLTTDEYD 195 (206)
T ss_dssp HHHHHH----HTCSEEEEECCSEE-ECCCCCSCC-------------EEESSSCSS-CSEEEHHHHHHHHHHTTSCSTTT
T ss_pred HHHHHH----hCCCCEEEEeCCcc-cCCCCCcce-------------EecccCCCC-CCccCHHHHHHHHHHHhcCcccc
Confidence 999884 35899999999997 433211111 000111000 489999999999999998754 5
Q ss_pred CcEEEecCCC
Q 035631 251 GHVYNVGTKK 260 (684)
Q Consensus 251 ~~~~ni~~~~ 260 (684)
+++|+++++.
T Consensus 196 g~~~~i~~g~ 205 (206)
T 1hdo_A 196 GHSTYPSHQY 205 (206)
T ss_dssp TCEEEEECCC
T ss_pred ccceeeeccc
Confidence 7899999764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=222.38 Aligned_cols=227 Identities=23% Similarity=0.266 Sum_probs=170.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEec-CCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGD-ITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~~~d~V 90 (684)
+|+|||||||||||+++++.|+++ |++|++++|+........+. ...+++++.+| +.|.+++.+++ .++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~--~~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLF--EGAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHH--TTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHH--hcCCEE
Confidence 578999999999999999999998 89999999975322111111 12468899999 99999999998 789999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc--cccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE--VYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~--vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
||+++... . ..|..+ ++++++|++.+.+++|||+||.. .|+. .+.+.|+.+
T Consensus 78 i~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---------------~~~~~y~~s 130 (352)
T 1xgk_A 78 FINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---------------WPAVPMWAP 130 (352)
T ss_dssp EECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---------------CCCCTTTHH
T ss_pred EEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---------------CCCccHHHH
Confidence 99987432 1 236666 99999999875478999999975 3321 233579999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHH-HHcCCc-eEEecCCCceEecccH-HHHHHHHHHHH
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILL-AMKGQQ-LPIHGNGSNVRSYLYC-ADVAEAFDVIL 245 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~i~~~~ 245 (684)
|..+|++++. .+++++++||+ +||++.... +.+.+... ...+.. +.+++++++.++++|+ +|+|+++..++
T Consensus 131 K~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l 204 (352)
T 1xgk_A 131 KFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSL-PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 204 (352)
T ss_dssp HHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSS-SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCCEEEEecc-eecCCchhc-ccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence 9999999865 48999999986 788864311 10000000 112222 2345667888999999 89999999999
Q ss_pred hcCC---CCcEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 246 HRGV---IGHVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 246 ~~~~---~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
.++. .+++||+++ +.+|+.|+++.+.+.+|.+.
T Consensus 205 ~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 205 KDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp HHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred hCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCC
Confidence 8752 578999995 67999999999999999764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=222.01 Aligned_cols=257 Identities=12% Similarity=0.132 Sum_probs=182.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++|+|||||||||||++|+++|+++|++| +++.+|++|.+++.++++...+|+||
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 45799999999999999999999999876 34578999999999999955569999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+|+. .|+.++.+++++|++.+ ++.++.| +||.. .+|.++.. |.+.|
T Consensus 89 ~~a~~------------------~n~~~~~~l~~aa~~~g~v~~~v~S---~~g~~----------~~e~~~~~-p~~~y 136 (346)
T 3i6i_A 89 STVGG------------------ESILDQIALVKAMKAVGTIKRFLPS---EFGHD----------VNRADPVE-PGLNM 136 (346)
T ss_dssp ECCCG------------------GGGGGHHHHHHHHHHHCCCSEEECS---CCSSC----------TTTCCCCT-THHHH
T ss_pred ECCch------------------hhHHHHHHHHHHHHHcCCceEEeec---ccCCC----------CCccCcCC-CcchH
Confidence 99982 28889999999999998 7644443 45421 45556665 88899
Q ss_pred hhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhh---hhccccccceecCCCCCchHHHHhhhcccccccCCCcc
Q 035631 504 SKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYEN---VCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
+.+|..+|.+... .+.++.+.|+..+++... +.+.. .......+.++|++...++| +
T Consensus 137 ~~sK~~~e~~l~~--~g~~~tivrpg~~~g~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~-----------------i 196 (346)
T 3i6i_A 137 YREKRRVRQLVEE--SGIPFTYICCNSIASWPY-YNNIHPSEVLPPTDFFQIYGDGNVKAYF-----------------V 196 (346)
T ss_dssp HHHHHHHHHHHHH--TTCCBEEEECCEESSCCC-SCC-----CCCCSSCEEEETTSCCCEEE-----------------E
T ss_pred HHHHHHHHHHHHH--cCCCEEEEEecccccccC-ccccccccccCCCceEEEccCCCceEEe-----------------c
Confidence 9999999987654 456777777765554221 01111 11123336677888888899 9
Q ss_pred chhhHHHHHHHHHhcC--ccceeEecC-CCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCC-------------
Q 035631 581 VLDEMLPIAIEMARRN--CRGAWNFTN-PGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPR------------- 644 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~--~~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~------------- 644 (684)
|++|+|++++.+++.+ .+++|++++ ++.+|+.|+++.+.+.+|.+..+..++..+.........
T Consensus 197 ~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 276 (346)
T 3i6i_A 197 AGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDI 276 (346)
T ss_dssp CHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHH
Confidence 9999999999999876 366899985 589999999999999999887776666554322221100
Q ss_pred ----CCCcCCc-----hhhhhcCC--CchhHHHHHHHHHhhcccc
Q 035631 645 ----SNNHMDV-----TKLKKEFP--EVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 645 ----~~~~~d~-----~kl~~~~~--~~~~~~~~l~~~~~~~~~~ 678 (684)
....++. .++...++ ..+++++.|++++.++..+
T Consensus 277 ~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~~~ 321 (346)
T 3i6i_A 277 FIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEK 321 (346)
T ss_dssp HTTCTTTSSCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHCC----
T ss_pred hccCCCcccccCCCCcccHHHhCCCCCcCcHHHHHHHHHHHhhcc
Confidence 0011111 22333333 6788999999999877654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-25 Score=235.85 Aligned_cols=231 Identities=15% Similarity=0.103 Sum_probs=153.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------------eeeccCCChhHHHH
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------------FGTGRLEDKNSLLD 413 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~d~~d~~~~~~ 413 (684)
.+|+|||||||||||++|+++|+++|++|. ++.+|++|.+.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 457999999999999999999999998773 3445676666655
Q ss_pred HHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 414 DMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 414 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
.+. ++|+|||+||.. . ...+....+++|+.++.+++++|.+.+.++||+||.++ |..... ..+..+++|+
T Consensus 147 ~~~--~~d~Vih~A~~~---~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~-~~~~~~~~E~ 216 (427)
T 4f6c_A 147 LPE--NMDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDI-DTEDVTFSEA 216 (427)
T ss_dssp CSS--CCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECS-SCSCCEECTT
T ss_pred CcC--CCCEEEECCccc---C---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccC-CCCCcccccc
Confidence 223 469999999965 2 23567789999999999999999995557999999999 432111 1223348888
Q ss_pred CC---CCCCCChhhhhhHhHhhhhhHH-hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 494 DE---PNFTRSFYSKTKAMVTFLSYLE-IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 494 ~~---~~~p~~~Y~~sK~~~E~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
++ .. |.+.|+.+|.++|.+.... ..+.++++.|+.++++............ ......++...+..
T Consensus 217 ~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 285 (427)
T 4f6c_A 217 DVYKGQL-LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIK----------TNRFSMVMNDLLQL 285 (427)
T ss_dssp CSCSSCC-CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGG----------GCHHHHHHHHHHHS
T ss_pred ccccCCC-CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcc----------hHHHHHHHHHHHhc
Confidence 87 44 7899999999999885443 2456667777765543321110000000 00000111122222
Q ss_pred ccccc----cCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcC
Q 035631 570 NKVVN----IPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 570 ~~~~~----~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
+.... ...+++|++|+|++++.++.++ .+++||+++++++++.|+++.+.+ ++
T Consensus 286 ~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 286 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp SEEEHHHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred CCCCCccccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 22111 0115599999999999999877 667999999999999999999998 55
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=226.43 Aligned_cols=203 Identities=13% Similarity=0.108 Sum_probs=163.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eEeeeeccC-CChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AFEFGTGRL-EDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTN 449 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v~~~~~d~-~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~n 449 (684)
|||||||||||||++|+++|+++|+ +| +..|+ .|.+.+.+++++. |+|||+|+... ..++...+++|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v--~~~d~~~d~~~l~~~~~~~--d~Vih~a~~~~-------~~~~~~~~~~n 69 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHI--FEVHRQTKEEELESALLKA--DFIVHLAGVNR-------PEHDKEFSLGN 69 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEE--EECCTTCCHHHHHHHHHHC--SEEEECCCSBC-------TTCSTTCSSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEE--EEECCCCCHHHHHHHhccC--CEEEECCcCCC-------CCCHHHHHHHH
Confidence 6999999999999999999999998 65 45678 8999999999986 99999999652 24677889999
Q ss_pred hhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhH--Hhhhhhhhh
Q 035631 450 VMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYL--EIFVLVICI 525 (684)
Q Consensus 450 v~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~ 525 (684)
+.++.+++++|++.++ ++||+||..+|+ .+.|+.+|..+|.+... ...+.++.+
T Consensus 70 ~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 127 (369)
T 3st7_A 70 VSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------------DNPYGESKLQGEQLLREYAEEYGNTVYI 127 (369)
T ss_dssp CBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------------CCCchHHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999999999875 699999998884 36899999999988544 344567777
Q ss_pred hhhhhhhHHH-------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-c
Q 035631 526 ECLINFQVEG-------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-C 597 (684)
Q Consensus 526 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~ 597 (684)
.|+.++++.+ +...+...+..+.++.+ +++...++| +|++|+|++++.+++++ .
T Consensus 128 ~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------i~v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 128 YRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTL-----------------NYVDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp EEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEE-----------------EEHHHHHHHHHHHHHTCCC
T ss_pred EECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEE-----------------EEHHHHHHHHHHHHhCCcc
Confidence 8887666543 22333333333333333 355666677 99999999999999887 3
Q ss_pred --cceeEecCCCcccHHHHHHHHHhhcCCc
Q 035631 598 --RGAWNFTNPGVISHNEILELYKEYIDPQ 625 (684)
Q Consensus 598 --~g~~ni~~~~~~s~~e~~~~i~~~~g~~ 625 (684)
+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 190 ~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 190 IENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp EETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred cCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999864
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=212.25 Aligned_cols=241 Identities=10% Similarity=0.026 Sum_probs=174.4
Q ss_pred EEEEEcCCcchhHHHHHHHHhc--CCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDK--GIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~--g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
+|||||||||||++++++|+++ |++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~-- 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGV--EKLLLISSSE-- 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECC-----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 5899999999999999999998 8876 35678999999999999887 9999999832
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVT 511 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E 511 (684)
. +.|+.++.+++++|++.++ ++|++||..+|. . | ..|+.+|..+|
T Consensus 77 --~-----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-----------------~---~-~~y~~sK~~~e 122 (286)
T 2zcu_A 77 --V-----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-----------------S---P-LGLADEHIETE 122 (286)
T ss_dssp ------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT-----------------C---C-STTHHHHHHHH
T ss_pred --c-----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-----------------C---c-chhHHHHHHHH
Confidence 0 1478899999999999887 699999987661 0 1 37999999999
Q ss_pred hhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 512 FLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
.+... .+.++.+.|+..+++... ..+....... .+ ..+++...++| +|++|+|++++.
T Consensus 123 ~~~~~--~~~~~~ilrp~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~-----------------i~~~Dva~~~~~ 180 (286)
T 2zcu_A 123 KMLAD--SGIVYTLLRNGWYSENYL-ASAPAALEHG-VF-IGAAGDGKIAS-----------------ATRADYAAAAAR 180 (286)
T ss_dssp HHHHH--HCSEEEEEEECCBHHHHH-TTHHHHHHHT-EE-EESCTTCCBCC-----------------BCHHHHHHHHHH
T ss_pred HHHHH--cCCCeEEEeChHHhhhhH-HHhHHhhcCC-ce-eccCCCCcccc-----------------ccHHHHHHHHHH
Confidence 87643 456677777766554322 1111111111 12 24555666778 999999999999
Q ss_pred HHhcC--ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh-------------------ccCCCCCcCC
Q 035631 592 MARRN--CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL-------------------VAPRSNNHMD 650 (684)
Q Consensus 592 ~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~d 650 (684)
+++++ .+++||+++++.+|+.|+++.+.+.+|.+..+.+++..+..... .... ....|
T Consensus 181 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 259 (286)
T 2zcu_A 181 VISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKG-GLFDD 259 (286)
T ss_dssp HHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTT-TTCCC
T ss_pred HhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC-CCccC
Confidence 99875 45699999999999999999999999987666555544321110 0011 35668
Q ss_pred chhh-h-hcCCCchhHHHHHHHHHhhc
Q 035631 651 VTKL-K-KEFPEVLSIKDSIIKYVLEP 675 (684)
Q Consensus 651 ~~kl-~-~~~~~~~~~~~~l~~~~~~~ 675 (684)
++|+ + +++ +..+++++|+++++++
T Consensus 260 ~~~~~~~lg~-~~~~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 260 SKTLSKLIGH-PTTTLAESVSHLFNVN 285 (286)
T ss_dssp CCHHHHHHTS-CCCCHHHHHHGGGC--
T ss_pred chHHHHHhCc-CCCCHHHHHHHHHhhc
Confidence 8888 3 453 7789999999988754
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=221.59 Aligned_cols=235 Identities=17% Similarity=0.154 Sum_probs=172.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc---ccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS---SLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+|+|||||||||||+++++.|+++ |++|++++|+.+.. ....+.. ....+++++.+|+.|.+++..++ .++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~--~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDAL--KQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHHH--hCCC
Confidence 478999999999999999999999 89999999975321 1111100 01347899999999999999999 6899
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChhHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYSA 167 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~ 167 (684)
+|||+++..... .|+.++++++++|++++.++|||+ | +||...... ..+..| .+.| .
T Consensus 79 ~vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~------~~~~~p~~~~y-~ 136 (313)
T 1qyd_A 79 VVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM------EHALQPGSITF-I 136 (313)
T ss_dssp EEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC------CCCCSSTTHHH-H
T ss_pred EEEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc------ccCCCCCcchH-H
Confidence 999999975421 156778999999999865899985 3 455432110 123333 4568 9
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
+|..+|++++ +.+++++++||+.++|.... .+..........++.+.++++++..+++++++|+|+++..++.+
T Consensus 137 sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 210 (313)
T 1qyd_A 137 DKRKVRRAIE----AASIPYTYVSSNMFAGYFAG--SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 210 (313)
T ss_dssp HHHHHHHHHH----HTTCCBCEEECCEEHHHHTT--TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----hcCCCeEEEEeceecccccc--ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence 9999999885 35899999999998875221 11000000012344556677888899999999999999999987
Q ss_pred CC-CCcEEEecC-CCccCHHHHHHHHHHHhCCCC
Q 035631 248 GV-IGHVYNVGT-KKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 248 ~~-~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~ 279 (684)
+. .++.|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 211 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 211 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred cccCCceEEEeCCCCccCHHHHHHHHHHhcCCCC
Confidence 53 467888875 478999999999999999754
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=232.85 Aligned_cols=225 Identities=16% Similarity=0.101 Sum_probs=162.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhc---CCeE---------------------------------------eeeeccCC-
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDK---GIAF---------------------------------------EFGTGRLE- 406 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~---g~~v---------------------------------------~~~~~d~~- 406 (684)
.+|+|||||||||||++|+++|+++ |++| .++.+|++
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 3579999999999999999999999 8765 23467887
Q ss_pred -----ChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCC
Q 035631 407 -----DKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDS 480 (684)
Q Consensus 407 -----d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~ 480 (684)
|.+.+..+++++ |+|||+||.. +. .+....+++|+.++.+++++|.+.++ ++||+||++||+...
T Consensus 152 ~~~gld~~~~~~~~~~~--D~Vih~Aa~~---~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~ 222 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETV--DLIVDSAAMV---NA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIE 222 (478)
T ss_dssp GGGGCCHHHHHHHHHHC--CEEEECCSSC---SB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSC
T ss_pred cccCCCHHHHHHHHcCC--CEEEECcccc---CC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccC
Confidence 667888888876 9999999965 22 55668899999999999999999887 699999999998655
Q ss_pred CCCCCCCCCCccCCCCCCCC-----------ChhhhhhHhHhhhhhHHh--hhhhhhhhhhhhhhHHHHHHhhhhhhccc
Q 035631 481 MHPQGSSIGFKEDDEPNFTR-----------SFYSKTKAMVTFLSYLEI--FVLVICIECLINFQVEGLLKAYENVCTLR 547 (684)
Q Consensus 481 ~~~~~~~~~~~e~~~~~~p~-----------~~Y~~sK~~~E~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (684)
..+ ++|+++.. |. +.|+.||.++|.+..... .+.++.+.|+.++++.+...
T Consensus 223 ~~~------~~E~~~~~-p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~--------- 286 (478)
T 4dqv_A 223 PSA------FTEDADIR-VISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA--------- 286 (478)
T ss_dssp TTT------CCSSSCHH-HHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSS---------
T ss_pred CCC------cCCccccc-ccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccC---------
Confidence 555 67766544 43 349999999998855443 45666777777554421100
Q ss_pred cccceecCCCCCchHHHHhhhc----ccccc-------------cCCCccchhhHHHHHHHHHhc----C--ccceeEec
Q 035631 548 LRMPISSDLSNPRNFVTKLARY----NKVVN-------------IPNSMTVLDEMLPIAIEMARR----N--CRGAWNFT 604 (684)
Q Consensus 548 ~~~~~~g~~~~~~~~~~~~~~~----~~~~~-------------~~~~~i~v~D~~~~~~~~~~~----~--~~g~~ni~ 604 (684)
......+|+.+++.. +.... ...+++|++|+|++++.++.+ + .+++||++
T Consensus 287 -------g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~ 359 (478)
T 4dqv_A 287 -------GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVM 359 (478)
T ss_dssp -------SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEES
T ss_pred -------CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEec
Confidence 000111222222211 11100 011459999999999999875 2 45699999
Q ss_pred CCCc--ccHHHHHHHHHhhcCCccc
Q 035631 605 NPGV--ISHNEILELYKEYIDPQLK 627 (684)
Q Consensus 605 ~~~~--~s~~e~~~~i~~~~g~~~~ 627 (684)
+++. +|+.|+++.+.+. |.+..
T Consensus 360 ~~~~~~~s~~el~~~l~~~-g~~~~ 383 (478)
T 4dqv_A 360 NPHDDGIGLDEYVDWLIEA-GYPIR 383 (478)
T ss_dssp CCCCSSCSHHHHHHHHHHT-TCSCE
T ss_pred CCCCCCcCHHHHHHHHHHc-CCCcc
Confidence 9988 9999999999986 65543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-24 Score=219.30 Aligned_cols=209 Identities=18% Similarity=0.243 Sum_probs=161.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhc-CC-eE----------------------eeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDK-GI-AF----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~-g~-~v----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
..|+|||||||||||++|+++|+++ |+ +| .++.+|++|.+.+.++++++ |+|||
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--D~Vih 97 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV--DICIH 97 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTC--SEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcC--CEEEE
Confidence 3479999999999999999999999 97 65 45678999999999999866 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
+||.. ....+..++...+++|+.++.+++++|.+.++ ++|++||..++. |.+.|+
T Consensus 98 ~Aa~~---~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~---------------------p~~~Y~ 153 (344)
T 2gn4_A 98 AAALK---HVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN---------------------PINLYG 153 (344)
T ss_dssp CCCCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS---------------------CCSHHH
T ss_pred CCCCC---CCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC---------------------CccHHH
Confidence 99966 33344567789999999999999999999987 699999975441 568999
Q ss_pred hhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHH--HHHhhhhhhcccc-ccceecCCCCCchHHHHhhhcccccccC
Q 035631 505 KTKAMVTFLSYLEI-----FVLVICIECLINFQVEG--LLKAYENVCTLRL-RMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 505 ~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.||+++|.+..... .+..+++.|+.++++.+ ..+.+...+..+. ++++ .++...|+|
T Consensus 154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i-~~~~~~r~~-------------- 218 (344)
T 2gn4_A 154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPI-TDIRMTRFW-------------- 218 (344)
T ss_dssp HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEE-SCTTCEEEE--------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEE-eCCCeEEee--------------
Confidence 99999998854433 34566777777666533 2222222222232 2333 355566677
Q ss_pred CCccchhhHHHHHHHHHhcCcc-ceeEecCCCcccHHHHHHHHHhhcC
Q 035631 577 NSMTVLDEMLPIAIEMARRNCR-GAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~~~-g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
+|++|+|++++.++++... .+||+.++ .+|+.|+++.+.+.++
T Consensus 219 ---i~v~D~a~~v~~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 219 ---ITLDEGVSFVLKSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp ---ECHHHHHHHHHHHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred ---EEHHHHHHHHHHHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence 9999999999999987744 49998776 6999999999987654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=204.42 Aligned_cols=209 Identities=14% Similarity=0.039 Sum_probs=159.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc--EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY--EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
+++|+||||||+|+||+++++.|+++ |+ +|++++|+... .... ...+++++.+|+.|.+.+..++ .++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~d~~~~~~~~--~~~ 85 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLT--FDEE----AYKNVNQEVVDFEKLDDYASAF--QGH 85 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCC--CCSG----GGGGCEEEECCGGGGGGGGGGG--SSC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCC--cccc----ccCCceEEecCcCCHHHHHHHh--cCC
Confidence 34589999999999999999999999 78 99999997521 1111 1236789999999999998888 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+||..... .++...+++|+.++.++++++++.+ +++||++||.++|+. +.+.|+.
T Consensus 86 d~vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----------------~~~~Y~~ 145 (242)
T 2bka_A 86 DVGFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------SNFLYLQ 145 (242)
T ss_dssp SEEEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHH
T ss_pred CEEEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC----------------CcchHHH
Confidence 9999999965322 2346788999999999999999887 789999999988752 2357999
Q ss_pred HHHHHHHHHHHHHHhcCC-CEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 168 TKAGAEMLVMAYHRSYGL-PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
+|...|.+++. .++ +++++||+.+||+.... .....+........+. .++ ...+++++|+|++++.++.
T Consensus 146 sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~-~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~ 215 (242)
T 2bka_A 146 VKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVV 215 (242)
T ss_dssp HHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh----cCCCCeEEEcCceecCCCCCC-cHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHh
Confidence 99999998854 478 59999999999996432 2333333333322211 111 1258999999999999999
Q ss_pred cCCCCcEEEecC
Q 035631 247 RGVIGHVYNVGT 258 (684)
Q Consensus 247 ~~~~~~~~ni~~ 258 (684)
++...+.|++.+
T Consensus 216 ~~~~~~~~~~~~ 227 (242)
T 2bka_A 216 RPRDKQMELLEN 227 (242)
T ss_dssp SCCCSSEEEEEH
T ss_pred CccccCeeEeeH
Confidence 877767777754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-24 Score=217.76 Aligned_cols=227 Identities=18% Similarity=0.205 Sum_probs=171.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|+++||||||||+||+++++.|+++ |++|++++|+.. .....+.. ....+++++.+|+.|.+++..++ .++|+|
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~-~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~--~~~d~v 83 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNS-SKTTLLDE-FQSLGAIIVKGELDEHEKLVELM--KKVDVV 83 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTC-SCHHHHHH-HHHTTCEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCC-chhhHHHH-hhcCCCEEEEecCCCHHHHHHHH--cCCCEE
Confidence 3468999999999999999999999 899999999753 11110000 01246899999999999999999 689999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChhHHHH
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYSATK 169 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~sK 169 (684)
||+++... +.++++++++|++.+.+++||+ | +||... ++..+..| .+.| .+|
T Consensus 84 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y-~sK 136 (318)
T 2r6j_A 84 ISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE-------DRINALPPFEALI-ERK 136 (318)
T ss_dssp EECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT-------TTCCCCHHHHHHH-HHH
T ss_pred EECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc-------ccccCCCCcchhH-HHH
Confidence 99998642 3456899999998865889985 3 455321 12223233 3468 999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
..+|.++++ .+++++++||+.+++. +++.+......++.+.++++++..+++++++|+|+++..++.++.
T Consensus 137 ~~~e~~~~~----~~~~~~~lr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~ 206 (318)
T 2r6j_A 137 RMIRRAIEE----ANIPYTYVSANCFASY------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR 206 (318)
T ss_dssp HHHHHHHHH----TTCCBEEEECCEEHHH------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHh----cCCCeEEEEcceehhh------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc
Confidence 999988853 5899999999987753 333333332345567777888889999999999999999998653
Q ss_pred -CCcEEEecC-CCccCHHHHHHHHHHHhCCCCC
Q 035631 250 -IGHVYNVGT-KKERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 250 -~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~~ 280 (684)
.++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 207 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 207 ALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp GTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred ccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 467788764 5789999999999999997643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-25 Score=238.07 Aligned_cols=223 Identities=17% Similarity=0.120 Sum_probs=155.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------------eeeccCCChhHHHHH
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------------FGTGRLEDKNSLLDD 414 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~d~~d~~~~~~~ 414 (684)
+|+|||||||||||++|+++|+++|++|. ++.+|+++.+.+. .
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 228 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 228 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence 47999999999999999999998888763 3455777666555 2
Q ss_pred HHhcCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 415 MKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 415 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+. ++|+|||+||.. + .........++|+.++.+++++|.+.+.++||+||.+| |..... ..+..+++|++
T Consensus 229 ~~--~~D~Vih~Aa~~---~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~-~~~~~~~~E~~ 298 (508)
T 4f6l_B 229 PE--NMDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDI-DTEDVTFSEAD 298 (508)
T ss_dssp SS--CCSEEEECCCC--------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECT-TCSCCEECTTC
T ss_pred cc--CCCEEEECCcee---c---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCcc-CCcCccccccc
Confidence 33 469999999965 2 23566788999999999999999996668999999999 321111 11233478887
Q ss_pred C---CCCCCChhhhhhHhHhhhhhHH-hhhhhhhhhhhhhhhHHHHHHh---------hhhhhcccccccee--cCCCCC
Q 035631 495 E---PNFTRSFYSKTKAMVTFLSYLE-IFVLVICIECLINFQVEGLLKA---------YENVCTLRLRMPIS--SDLSNP 559 (684)
Q Consensus 495 ~---~~~p~~~Y~~sK~~~E~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--g~~~~~ 559 (684)
+ .. |.+.|+.+|..+|.+.... ..+.++.+.|+..+++.+.... +...+........+ +++...
T Consensus 299 ~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~ 377 (508)
T 4f6l_B 299 VYKGQL-LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP 377 (508)
T ss_dssp SCSSBC-CCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred cccccc-CCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence 6 33 7789999999999885443 2466777777776654332110 11111111111111 223344
Q ss_pred chHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhc
Q 035631 560 RNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYI 622 (684)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~ 622 (684)
++| +|++|+|++++.++.++ .+++||+++++.+|+.|+++.+.+..
T Consensus 378 ~~~-----------------v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 378 VDF-----------------SFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp EEC-----------------EEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred EEE-----------------EcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 444 99999999999999877 67799999999999999999999764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=214.01 Aligned_cols=228 Identities=17% Similarity=0.159 Sum_probs=170.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC-cc---cccccCCCCCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD-YC---SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~-~~---~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
+||+||||||||+||+++++.|+++ |++|++++|+. .. .....+.. ....+++++.+|+.|.+++..++ .+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~~a~--~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMVSVL--KQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHHHHH--cC
Confidence 4578999999999999999999999 89999999975 11 11111100 01246899999999999999999 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChh
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPY 165 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 165 (684)
+|+|||+++... +.++++++++|++.+.++|||+ | +||... ++..+..| .+.|
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 131 (321)
T 3c1o_A 78 VDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE-------DRIKPLPPFESVL 131 (321)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG-------GGCCCCHHHHHHH
T ss_pred CCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc-------cccccCCCcchHH
Confidence 999999998642 4457899999998765789983 3 455321 12223233 4579
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHH---HHHcCCceEEecCCCceEecccHHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFIL---LAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 242 (684)
.+|..+|.+++. .+++++++||+.++|. +.+.+.. ....++.+.++++++..+++++++|+|+++.
T Consensus 132 -~sK~~~e~~~~~----~~~~~~~lrp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 132 -EKKRIIRRAIEA----AALPYTYVSANCFGAY------FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEEHHH------HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEeceeccc------cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence 999999998853 4899999999988774 2222221 1123455677788889999999999999999
Q ss_pred HHHhcCC-CCcEEEecC-CCccCHHHHHHHHHHHhCCCCC
Q 035631 243 VILHRGV-IGHVYNVGT-KKERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 243 ~~~~~~~-~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~~ 280 (684)
.++.++. .++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 201 ~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 9998754 467788875 5899999999999999997653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=208.33 Aligned_cols=203 Identities=11% Similarity=0.113 Sum_probs=156.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
++|+||||||+|+||++|+++|+++|++| .++.+|++|.+++.++++++ |+|||+||..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vi~~Ag~~---- 75 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGC--DGIVHLGGIS---- 75 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTC--SEEEECCSCC----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCC--CEEEECCCCc----
Confidence 34589999999999999999999999876 56779999999999999976 9999999964
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
........+++|+.++.+++++|++.+. ++|++||..+|+..... .+++|+.+.. |.+.|+.||..+|.+
T Consensus 76 ---~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~-----~~~~e~~~~~-~~~~Y~~sK~~~e~~ 146 (267)
T 3rft_A 76 ---VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQT-----ERLGPDVPAR-PDGLYGVSKCFGENL 146 (267)
T ss_dssp ---SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTT-----SCBCTTSCCC-CCSHHHHHHHHHHHH
T ss_pred ---CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCC-----CCCCCCCCCC-CCChHHHHHHHHHHH
Confidence 2455678999999999999999999886 79999999999743221 1278888887 999999999999988
Q ss_pred hhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 514 SYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 514 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
.... ..+..+.+.|+..+++ -.+++...++| +|++|+++++..
T Consensus 147 ~~~~a~~~g~~~~~vr~~~v~~------------------~~~~~~~~~~~-----------------~~~~d~a~~~~~ 191 (267)
T 3rft_A 147 ARMYFDKFGQETALVRIGSCTP------------------EPNNYRMLSTW-----------------FSHDDFVSLIEA 191 (267)
T ss_dssp HHHHHHHHCCCEEEEEECBCSS------------------SCCSTTHHHHB-----------------CCHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEEeecccC------------------CCCCCCceeeE-----------------EcHHHHHHHHHH
Confidence 5433 3344444455553321 12333444566 999999999999
Q ss_pred HHhcCc--cceeEecCCCcccHHHHHHHHHhhcCC
Q 035631 592 MARRNC--RGAWNFTNPGVISHNEILELYKEYIDP 624 (684)
Q Consensus 592 ~~~~~~--~g~~ni~~~~~~s~~e~~~~i~~~~g~ 624 (684)
+++.+. ..++++++++..++.++... +.+|.
T Consensus 192 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~g~ 224 (267)
T 3rft_A 192 VFRAPVLGCPVVWGASANDAGWWDNSHL--GFLGW 224 (267)
T ss_dssp HHHCSCCCSCEEEECCCCTTCCBCCGGG--GGGCC
T ss_pred HHhCCCCCceEEEEeCCCCCCcccChhH--HHCCC
Confidence 998773 34788888887777665333 45554
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=212.35 Aligned_cols=229 Identities=18% Similarity=0.203 Sum_probs=169.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc----ccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS----SLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
+|+|+||||||+||+++++.|+++ |++|++++|+.... +...+.. ....+++++.+|+.|.+.+..++ .++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~~~~--~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLES-FKASGANIVHGSIDDHASLVEAV--KNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHH-HHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHH-HHhCCCEEEEeccCCHHHHHHHH--cCC
Confidence 578999999999999999999999 89999999975311 1100000 01357899999999999999998 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChhH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYS 166 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~ 166 (684)
|+|||+++... +.++++++++|++++.++|||+ | +||... ++..+..| .+.|
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y- 131 (308)
T 1qyc_A 79 DVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-S---EFGNDV-------DNVHAVEPAKSVF- 131 (308)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TSCCCCTTHHHHH-
T ss_pred CEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-c---ccccCc-------cccccCCcchhHH-
Confidence 99999998642 3456899999999865899984 4 355321 12223334 3568
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh
Q 035631 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 167 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 246 (684)
.+|..+|.+++. .+++++++||+.++|.... .+... ......++.+.++++++..++|++++|+|+++..++.
T Consensus 132 ~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 132 EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLR--SLAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTT--TTTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHh----cCCCeEEEEeceecccccc--ccccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 999999988864 4899999999999885321 11000 0001234566777888899999999999999999997
Q ss_pred cCC-CCcEEEecC-CCccCHHHHHHHHHHHhCCCC
Q 035631 247 RGV-IGHVYNVGT-KKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 247 ~~~-~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~ 279 (684)
++. .++.|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence 653 467888865 478999999999999999764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=207.12 Aligned_cols=229 Identities=21% Similarity=0.187 Sum_probs=168.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc-----cccccCCCCCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-----SSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
||+||||||||+||+++++.|+++ |++|++++|+.+. .+...+.. ....+++++.+|+.|.+.+..++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~~~~--~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDN-YQSLGVILLEGDINDHETLVKAI--KQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHH-HHhCCCEEEEeCCCCHHHHHHHH--hC
Confidence 468999999999999999999999 8999999997510 11111100 01246899999999999999999 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC-CChh
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPY 165 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 165 (684)
+|+|||+++... +.++.+++++|++++.++|||+ | +||... ++..+..| .+.|
T Consensus 77 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 130 (307)
T 2gas_A 77 VDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV-------DRHDAVEPVRQVF 130 (307)
T ss_dssp CSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TSCCCCTTHHHHH
T ss_pred CCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc-------ccccCCCcchhHH
Confidence 999999998643 3457899999998865899983 3 455321 12223334 3578
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 245 (684)
.+|..+|.+++. .+++++++||+.+++.... .+... .......+.+.++++++..+++++++|+|+++..++
T Consensus 131 -~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 131 -EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLR--NLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEETTTTGG--GTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEcceeeccccc--ccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 999999988854 4899999999998875321 11000 000123445667788888999999999999999999
Q ss_pred hcCC-CCcEEEecC-CCccCHHHHHHHHHHHhCCCC
Q 035631 246 HRGV-IGHVYNVGT-KKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 246 ~~~~-~~~~~ni~~-~~~~t~~e~~~~i~~~~g~~~ 279 (684)
.++. .++.|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCC
Confidence 8654 467788765 478999999999999999764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.1e-23 Score=206.07 Aligned_cols=243 Identities=16% Similarity=0.150 Sum_probs=173.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
++|+||||||+|+||++++++|+++ |++|++++|+.. ....+.. ....+++++.+|+.|.+++..++...
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTE--ALDDLVA-AYPDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGG--GGHHHHH-HCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH-hccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999 899999999742 2211111 11347899999999999988777432
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHH----HHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYG----THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||.... ....+++...+++|+.+ ++.++..+++.+ ..+||++||...+.
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-------------- 143 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL-------------- 143 (281)
T ss_dssp CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--------------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC--------------
Confidence 89999999997543 22334456688999999 566666666665 68999999977653
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-----ChHHHHHHHHHcCCceEEecCCCceE
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-----KLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+..+.+.|+.+|...|.+.+.++.+ ++++++++|||++.++...+. .....+.........+. ......
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 220 (281)
T 3m1a_A 144 SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QGSDGS 220 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC----
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hhccCC
Confidence 2234568999999999999998877 689999999999988742111 01111111111100010 011224
Q ss_pred ecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhC
Q 035631 230 SYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFK 276 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g 276 (684)
.+.+++|+|++++.++..+..+..|+++++....+.+....+.+.++
T Consensus 221 ~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 221 QPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp -CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 67889999999999999888888999999887777777777766553
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=208.79 Aligned_cols=196 Identities=13% Similarity=0.114 Sum_probs=150.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNV 435 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 435 (684)
||+||||||+||||++|+++|+++|++| .++.+|++|.+.+.+++++. |+|||+|+..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~----- 74 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDC--DGIIHLGGVS----- 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTC--SEEEECCSCC-----
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCC--CEEEECCcCC-----
Confidence 4689999999999999999999999876 34568999999999999876 9999999954
Q ss_pred cccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCC-CCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 436 DWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDS-MHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 436 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~-~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
........+++|+.++.+++++|.+.++ ++||+||..+|+..+ ..+ ++|++++. |.+.|+.+|..+|.+
T Consensus 75 --~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~------~~E~~~~~-~~~~Y~~sK~~~e~~ 145 (267)
T 3ay3_A 75 --VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTR------IDTEVPRR-PDSLYGLSKCFGEDL 145 (267)
T ss_dssp --SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSC------BCTTSCCC-CCSHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCC------CCCCCCCC-CCChHHHHHHHHHHH
Confidence 2345568899999999999999999886 799999999998533 233 88998887 999999999999988
Q ss_pred hhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 514 SYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 514 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
.... ..+.++.+.|+..+++ + + .++...++| +|++|+|++++.
T Consensus 146 ~~~~~~~~gi~~~~lrp~~v~~-~---------------~--~~~~~~~~~-----------------~~~~dva~~~~~ 190 (267)
T 3ay3_A 146 ASLYYHKFDIETLNIRIGSCFP-K---------------P--KDARMMATW-----------------LSVDDFMRLMKR 190 (267)
T ss_dssp HHHHHHTTCCCEEEEEECBCSS-S---------------C--CSHHHHHHB-----------------CCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeceeecC-C---------------C--CCCCeeecc-----------------ccHHHHHHHHHH
Confidence 5432 3345555566654321 0 0 011123456 999999999999
Q ss_pred HHhcCc--cceeEecCCCcccHHHHHHH
Q 035631 592 MARRNC--RGAWNFTNPGVISHNEILEL 617 (684)
Q Consensus 592 ~~~~~~--~g~~ni~~~~~~s~~e~~~~ 617 (684)
+++++. .++||+.++...++.++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 218 (267)
T 3ay3_A 191 AFVAPKLGCTVVYGASANTESWWDNDKS 218 (267)
T ss_dssp HHHSSCCCEEEEEECCSCSSCCBCCGGG
T ss_pred HHhCCCCCceeEecCCCccccccCHHHH
Confidence 998763 45888877655555444443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.6e-23 Score=202.53 Aligned_cols=229 Identities=18% Similarity=0.083 Sum_probs=162.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC--CCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--GIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 89 (684)
||+||||||+|+||++++++|+++ |++|++++|+... .. . .+.+|+.+.+.+..++... ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~---~--------~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQAD--IE---A--------DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS--EE---C--------CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhH--cc---c--------cccCCcccHHHHHHHHHHcCCCccE
Confidence 368999999999999999999999 8999999997521 10 0 1568999988888887433 8999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCC-----CCCC-----
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIG-----NPEA----- 156 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~-----~~e~----- 156 (684)
|||+||.... ..++...+++|+.++.++++++... ...+++|++||..+|+......... .++.
T Consensus 66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 2dkn_A 66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIEL 142 (255)
T ss_dssp EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhh
Confidence 9999997542 3567889999999999999988654 2268999999999986542110000 0000
Q ss_pred --CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 157 --SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 157 --~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
....+.+.|+.+|.+.|.+++.++.+ .+++++++||+.++|+.. ..+.............. + ..+++
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~------~~~~~~~~~~~~~~~~~-~-~~~~~ 214 (255)
T 2dkn_A 143 AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL------QASKADPRYGESTRRFV-A-PLGRG 214 (255)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH------HHHHHCTTTHHHHHSCC-C-TTSSC
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh------hhcccchhhHHHHHHHH-H-HhcCC
Confidence 01134568999999999999888766 589999999999998732 11100000000000000 1 23478
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHH
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLD 266 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e 266 (684)
++++|+|++++.++..+ ..++.|+++++..++++|
T Consensus 215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 99999999999999764 357899999987766543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-21 Score=188.57 Aligned_cols=203 Identities=18% Similarity=0.208 Sum_probs=140.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCC-cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPD-YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
.++||+||||||||+||+++++.|+++ | ++|++++|+.. .... ....+++++.+|+.|.+++.+++ .++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~--~~~~----~~~~~~~~~~~Dl~d~~~~~~~~--~~~ 89 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPA--KIHK----PYPTNSQIIMGDVLNHAALKQAM--QGQ 89 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGG--GSCS----SCCTTEEEEECCTTCHHHHHHHH--TTC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChh--hhcc----cccCCcEEEEecCCCHHHHHHHh--cCC
Confidence 456788999999999999999999999 7 89999999752 2211 12357899999999999999999 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+|||+++.... ...++++++++++.+ +++||++||..+|+....... ...+.....+...|
T Consensus 90 D~vv~~a~~~~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 151 (236)
T 3qvo_A 90 DIVYANLTGEDL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFV-EWNNAVIGEPLKPF-- 151 (236)
T ss_dssp SEEEEECCSTTH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC-----------------CGGGHHH--
T ss_pred CEEEEcCCCCch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccc-cchhhcccchHHHH--
Confidence 999999985321 134678999999987 899999999999986543221 11222222223334
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc-eEecccHHHHHHHHHHHHh
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN-VRSYLYCADVAEAFDVILH 246 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i~~~~~ 246 (684)
..+|..+ +..+++++++||++++++.... ......+.. ...+++.+|+|++++.++.
T Consensus 152 --~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~----------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~ 209 (236)
T 3qvo_A 152 --RRAADAI----EASGLEYTILRPAWLTDEDIID----------------YELTSRNEPFKGTIVSRKSVAALITDIID 209 (236)
T ss_dssp --HHHHHHH----HTSCSEEEEEEECEEECCSCCC----------------CEEECTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred --HHHHHHH----HHCCCCEEEEeCCcccCCCCcc----------------eEEeccCCCCCCcEECHHHHHHHHHHHHc
Confidence 4445444 3569999999999999874321 011111111 1357999999999999998
Q ss_pred cCC--CCcEEEecCCCc
Q 035631 247 RGV--IGHVYNVGTKKE 261 (684)
Q Consensus 247 ~~~--~~~~~ni~~~~~ 261 (684)
++. .++.|++++++.
T Consensus 210 ~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 210 KPEKHIGENIGINQPGT 226 (236)
T ss_dssp STTTTTTEEEEEECSSC
T ss_pred CcccccCeeEEecCCCC
Confidence 765 678999998753
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=198.06 Aligned_cols=226 Identities=14% Similarity=0.130 Sum_probs=166.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+..... ...+. ....++.++.+|+.|.+++..++..
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQ--QLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHH--HhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 00111 0124678899999999998887742
Q ss_pred --CCCCEEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ .++||++||...+...
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------- 153 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN---------- 153 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC----------
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC----------
Confidence 2899999999976432 2233456788999999999998885 334 6899999998876421
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...|.+++.++.+. +++++++||+.++++.... ...+.+......+.++ ..+.
T Consensus 154 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~ 219 (255)
T 1fmc_A 154 ----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPI---------RRLG 219 (255)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSS---------CSCB
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh-ccChHHHHHHHhcCCc---------ccCC
Confidence 234679999999999998887664 8999999999999874211 1123333333333321 2468
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
+++|+|+++..++... ..+++|++.+|...|+
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 8999999999999653 2578999999887764
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-22 Score=198.82 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=175.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.... ..+. ......++.++.+|+.|.+++..++..
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHG--QKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHH--HHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999999 89999999864211 1110 001113688999999999998887742
Q ss_pred -CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++... ...++||++||...|....
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 161 (278)
T 2bgk_A 90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE-------- 161 (278)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--------
Confidence 279999999997532 1122345578899999999999988753 1268999999988875321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...|.+++.++.+ ++++++++||++++++..... ..............+ .....
T Consensus 162 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 229 (278)
T 2bgk_A 162 -----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGT 229 (278)
T ss_dssp -----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSC
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccc
Confidence 13457999999999999888765 589999999999999864211 111222222221111 11235
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHH
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICTL 274 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~ 274 (684)
+++++|+|++++.++... ..++.|++.++..+++.|+++.+.+.
T Consensus 230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence 789999999999999643 35789999999999999999887654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-23 Score=198.80 Aligned_cols=190 Identities=13% Similarity=0.103 Sum_probs=147.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------eeeeccCCC-hhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------EFGTGRLED-KNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------~~~~~d~~d-~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|||||||||||||++++++|+++|++| +++.+|++| .+++.++++++ |+|||+|+.. .
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~--d~vi~~ag~~---~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGM--DAIINVSGSG---G 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTC--SEEEECCCCT---T
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCC--CEEEECCcCC---C
Confidence 699999999999999999999999976 567889999 99999999876 9999999955 1
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
...+++|+.++.+++++|++.++ ++|++||.++|++. + +.| +++. |.+.|+.+|..+|.+
T Consensus 76 --------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~------~~e-~~~~-~~~~Y~~sK~~~e~~ 136 (219)
T 3dqp_A 76 --------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---K------WIG-AGFD-ALKDYYIAKHFADLY 136 (219)
T ss_dssp --------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---G------CCS-HHHH-HTHHHHHHHHHHHHH
T ss_pred --------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---c------ccc-cccc-cccHHHHHHHHHHHH
Confidence 23788999999999999999887 69999998776522 2 444 4444 788999999999987
Q ss_pred hhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 514 SYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
.. ...+.++.+.|+..+++..... .+. . +...++| +|++|+|++++.++
T Consensus 137 ~~-~~~~i~~~ilrp~~v~g~~~~~----------~~~-~--~~~~~~~-----------------i~~~Dva~~i~~~l 185 (219)
T 3dqp_A 137 LT-KETNLDYTIIQPGALTEEEATG----------LID-I--NDEVSAS-----------------NTIGDVADTIKELV 185 (219)
T ss_dssp HH-HSCCCEEEEEEECSEECSCCCS----------EEE-E--SSSCCCC-----------------EEHHHHHHHHHHHH
T ss_pred HH-hccCCcEEEEeCceEecCCCCC----------ccc-c--CCCcCCc-----------------ccHHHHHHHHHHHH
Confidence 65 4455666667766544321100 000 1 1334456 99999999999999
Q ss_pred hcC--ccceeEecCCCcccHHHHHHH
Q 035631 594 RRN--CRGAWNFTNPGVISHNEILEL 617 (684)
Q Consensus 594 ~~~--~~g~~ni~~~~~~s~~e~~~~ 617 (684)
+++ .+++||++++ ..++.|+++.
T Consensus 186 ~~~~~~g~~~~i~~g-~~~~~e~~~~ 210 (219)
T 3dqp_A 186 MTDHSIGKVISMHNG-KTAIKEALES 210 (219)
T ss_dssp TCGGGTTEEEEEEEC-SEEHHHHHHT
T ss_pred hCccccCcEEEeCCC-CccHHHHHHH
Confidence 877 3559999887 4999888654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=192.41 Aligned_cols=223 Identities=17% Similarity=0.102 Sum_probs=162.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 88 (684)
+.+|+||||||+|+||++++++|+++ |++|++++|+.. ....+... ..+++++.+|+.|.+.+.+++... ++|
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNS--DLVSLAKE--CPGIEPVCVDLGDWDATEKALGGIGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHh--ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence 35689999999999999999999999 899999999742 11111110 135678899999999999988533 589
Q ss_pred EEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||..... ...+++...+++|+.++.++++++... +..++||++||...|... .
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~ 144 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------------P 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------T
T ss_pred EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC--------------C
Confidence 999999975432 122345668899999999999887653 224799999998877532 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
+...|+.+|...|.+++.++.+ .+++++++||+.++++........+.+...+..+.+ .+++++++|+
T Consensus 145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dv 215 (244)
T 1cyd_A 145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDV 215 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHH
Confidence 2457999999999999988776 589999999999998742100011223233322221 2478999999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
|++++.++..+ ..++.+++.+|..
T Consensus 216 a~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 216 VNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp HHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred HHHHHHHhCchhhcccCCEEEECCCcc
Confidence 99999999753 3578899887754
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=182.50 Aligned_cols=202 Identities=16% Similarity=0.120 Sum_probs=147.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHH-hcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~-~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+||++||||||||+||+++++.|+ ++ |++|++++|+... ....+. ....+++++.+|+.|.+++.+++ .++|
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~-~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~--~~~d 75 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKT-RIPPEI--IDHERVTVIEGSFQNPGXLEQAV--TNAE 75 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHH-HSCHHH--HTSTTEEEEECCTTCHHHHHHHH--TTCS
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccc-cchhhc--cCCCceEEEECCCCCHHHHHHHH--cCCC
Confidence 455679999999999999999999 78 8999999997420 222110 02357899999999999999999 6999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-hhHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTN-PYSA 167 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~-~Y~~ 167 (684)
+|||+||.. |+. ++++++++++.+ +++||++||..+|+....... +... .... .|+.
T Consensus 76 ~vv~~ag~~---------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~----~~~~-~~~~~~y~~ 133 (221)
T 3r6d_A 76 VVFVGAMES---------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALE----KWTF-DNLPISYVQ 133 (221)
T ss_dssp EEEESCCCC---------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHH----HHHH-HTSCHHHHH
T ss_pred EEEEcCCCC---------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccc----cccc-cccccHHHH
Confidence 999999853 344 899999999987 899999999999874322100 0000 1123 7999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC-ceEecccHHHHHHHHHHHH-
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS-NVRSYLYCADVAEAFDVIL- 245 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~i~~~~- 245 (684)
+|...|..++ ..+++++++||++++++.... . ........ ....+++.+|+|++++.++
T Consensus 134 ~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~ 194 (221)
T 3r6d_A 134 GERQARNVLR----ESNLNYTILRLTWLYNDPEXT-D--------------YELIPEGAQFNDAQVSREAVVKAIFDILH 194 (221)
T ss_dssp HHHHHHHHHH----HSCSEEEEEEECEEECCTTCC-C--------------CEEECTTSCCCCCEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH----hCCCCEEEEechhhcCCCCCc-c--------------eeeccCCccCCCceeeHHHHHHHHHHHHH
Confidence 9999999885 359999999999999873211 1 11111111 1124799999999999999
Q ss_pred -hcCC--CCcEEEecCC
Q 035631 246 -HRGV--IGHVYNVGTK 259 (684)
Q Consensus 246 -~~~~--~~~~~ni~~~ 259 (684)
.++. .++.+.+.++
T Consensus 195 ~~~~~~~~~~~~~i~~~ 211 (221)
T 3r6d_A 195 AADETPFHRTSIGVGEP 211 (221)
T ss_dssp CSCCGGGTTEEEEEECT
T ss_pred hcChhhhhcceeeecCC
Confidence 6653 4567777754
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=196.17 Aligned_cols=216 Identities=11% Similarity=0.048 Sum_probs=158.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC-CeE--------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG-IAF--------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g-~~v--------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
+|+||||||||+||++++++|+++| ++| +++.+|++|.+++.++++++ |+|||+|+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGA--YATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcC--CEEEEeCCC
Confidence 4699999999999999999999999 876 35678999999999999987 999999984
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.. . ...+.|+.++.+++++|++.++ ++|+.||..+|+.. +.. +...|+.+|.
T Consensus 83 ~~---------~--~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~------------~~~----~~~~y~~sK~ 135 (299)
T 2wm3_A 83 WE---------S--CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT------------AGR----LAAAHFDGKG 135 (299)
T ss_dssp HH---------H--TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT------------TTS----CCCHHHHHHH
T ss_pred Cc---------c--ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC------------CCc----ccCchhhHHH
Confidence 31 0 1235678899999999999887 58998777777521 111 3468999999
Q ss_pred hHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccc-cceecCCCCCchHHHHhhhcccccccCCCccchhhHHH
Q 035631 509 MVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLR-MPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLP 587 (684)
Q Consensus 509 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~ 587 (684)
.+|.+... .+.++.+.|+..+++......+......+.. ....+.++..++| +|++|+++
T Consensus 136 ~~e~~~~~--~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------------i~~~Dva~ 196 (299)
T 2wm3_A 136 EVEEYFRD--IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG-----------------MSVSDLGP 196 (299)
T ss_dssp HHHHHHHH--HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEE-----------------ECGGGHHH
T ss_pred HHHHHHHH--CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccce-----------------ecHHHHHH
Confidence 99987543 3566777777766653221111111111111 1112234556677 99999999
Q ss_pred HHHHHHhcC---ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 588 IAIEMARRN---CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 588 ~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
+++.+++++ .++.||+++ +.+|+.|+++.+.+.+|.+..+.+++..+
T Consensus 197 ~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 246 (299)
T 2wm3_A 197 VVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPED 246 (299)
T ss_dssp HHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHH
T ss_pred HHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHH
Confidence 999999864 356999986 68999999999999999887766666544
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-22 Score=194.96 Aligned_cols=195 Identities=13% Similarity=0.124 Sum_probs=143.7
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
++.|+||||||||+||++++++|+++|++| .++.+|++ +.+.+.+.+. |+|||+||.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~--D~vi~~ag~ 94 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASI--DAVVFAAGS 94 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTC--SEEEECCCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCC--CEEEECCCC
Confidence 345799999999999999999999999976 34556766 5566666655 999999996
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
. . .......+++|+.++.+++++|++.++ ++|++||...+. .+.++ . +.+.|+.+|.
T Consensus 95 ~---~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~-------------~~~~~-~-~~~~Y~~sK~ 152 (236)
T 3e8x_A 95 G---P----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVD-------------PDQGP-M-NMRHYLVAKR 152 (236)
T ss_dssp C---T----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSC-------------GGGSC-G-GGHHHHHHHH
T ss_pred C---C----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCC-------------CCCCh-h-hhhhHHHHHH
Confidence 5 1 356778999999999999999999886 699999954432 11122 3 6789999999
Q ss_pred hHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHH
Q 035631 509 MVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588 (684)
Q Consensus 509 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~ 588 (684)
.+|.+.. ..+.++.+.|+..+++... .-.+...+.+...++| +|++|+|++
T Consensus 153 ~~e~~~~--~~gi~~~~lrpg~v~~~~~----------~~~~~~~~~~~~~~~~-----------------i~~~Dva~~ 203 (236)
T 3e8x_A 153 LADDELK--RSSLDYTIVRPGPLSNEES----------TGKVTVSPHFSEITRS-----------------ITRHDVAKV 203 (236)
T ss_dssp HHHHHHH--HSSSEEEEEEECSEECSCC----------CSEEEEESSCSCCCCC-----------------EEHHHHHHH
T ss_pred HHHHHHH--HCCCCEEEEeCCcccCCCC----------CCeEEeccCCCcccCc-----------------EeHHHHHHH
Confidence 9998754 4456666677665543211 0112222333344566 999999999
Q ss_pred HHHHHhcC--ccceeEecCCCcccHHHHHHHHH
Q 035631 589 AIEMARRN--CRGAWNFTNPGVISHNEILELYK 619 (684)
Q Consensus 589 ~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~ 619 (684)
++.+++++ .+++||++++ .+++.|+++.++
T Consensus 204 ~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 204 IAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp HHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred HHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 99999877 4559999887 699999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-22 Score=191.25 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=124.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPN 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 434 (684)
|||||||||||||++|+++|+++|++| .++.+|++|.+. +.+.++ |+|||+|+.. .
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~---~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQ--NVVVDAYGIS---P 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTC--SEEEECCCSS---T
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCC--CEEEECCcCC---c
Confidence 699999999999999999999999977 456788888887 667776 9999999954 1
Q ss_pred ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 435 VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 435 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
...+.|+.++.+++++|++.++ ++|++||+.+|.+.+... +..|+++.. |.+.|+.+|..+|.+
T Consensus 74 ---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~-----~~~~~~~~~-~~~~y~~~k~~~e~~ 138 (221)
T 3ew7_A 74 ---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN-----TLLESKGLR-EAPYYPTARAQAKQL 138 (221)
T ss_dssp ---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------------CCCSCCHHHHHHHH
T ss_pred ---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc-----cccccCCCC-CHHHHHHHHHHHHHH
Confidence 1256799999999999999865 799999998654333221 156666666 889999999999987
Q ss_pred hhHH--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 514 SYLE--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 514 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
.+.. ..+.++.+.|+..+++.+.... .+......+.+.+++. ++ +|++|+|++++.
T Consensus 139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~---~~-----------------i~~~Dva~~~~~ 196 (221)
T 3ew7_A 139 EHLKSHQAEFSWTYISPSAMFEPGERTG--DYQIGKDHLLFGSDGN---SF-----------------ISMEDYAIAVLD 196 (221)
T ss_dssp HHHHTTTTTSCEEEEECSSCCCCC--------------------------C-----------------CCHHHHHHHHHH
T ss_pred HHHHhhccCccEEEEeCcceecCCCccC--ceEeccccceecCCCC---ce-----------------EeHHHHHHHHHH
Confidence 3333 5566777777776654321110 0000011111222211 34 999999999999
Q ss_pred HHhcC--ccceeEecCCCcccHHH
Q 035631 592 MARRN--CRGAWNFTNPGVISHNE 613 (684)
Q Consensus 592 ~~~~~--~~g~~ni~~~~~~s~~e 613 (684)
+++++ .+..||++++...+.+|
T Consensus 197 ~l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 197 EIERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp HHHSCSCTTSEEECCC--------
T ss_pred HHhCccccCCEEEECCCCcccccc
Confidence 99987 45699999998877665
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=184.88 Aligned_cols=191 Identities=17% Similarity=0.126 Sum_probs=148.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~V 90 (684)
+|+||||||+|+||++++++|+ + |++|++++|+.. .+.+|+.|.+++.+++... ++|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 3589999999999999999999 8 899999999641 4689999999988887432 68999
Q ss_pred EEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 91 MHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 91 ih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
||+||...... ..++....+++|+.++.++++++...- ...+||++||...+.. ..+...|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~--------------~~~~~~Y 128 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP--------------IVQGASA 128 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC--------------CTTCHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC--------------CCccHHH
Confidence 99999654322 123345677899999999999998751 0169999999766532 2234679
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 243 (684)
+.+|...|.+++.++.+. +++++++||+.++++.. . . ++....+++++++|+|++++.
T Consensus 129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~-------~----~---------~~~~~~~~~~~~~dva~~~~~ 188 (202)
T 3d7l_A 129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD-------K----L---------EPFFEGFLPVPAAKVARAFEK 188 (202)
T ss_dssp HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-------H----H---------GGGSTTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-------h----h---------hhhccccCCCCHHHHHHHHHH
Confidence 999999999999887653 89999999999998732 0 0 111123578999999999998
Q ss_pred HHhcCCCCcEEEe
Q 035631 244 ILHRGVIGHVYNV 256 (684)
Q Consensus 244 ~~~~~~~~~~~ni 256 (684)
++.....+++||+
T Consensus 189 ~~~~~~~G~~~~v 201 (202)
T 3d7l_A 189 SVFGAQTGESYQV 201 (202)
T ss_dssp HHHSCCCSCEEEE
T ss_pred hhhccccCceEec
Confidence 8866667778886
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=192.54 Aligned_cols=207 Identities=11% Similarity=0.080 Sum_probs=149.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc-CCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK-GIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~-g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
|||||||||||||++++++|+++ |++| +++.+|++|.+++.++++++ |+|||+|+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~-- 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGM--DTVVFIPSII-- 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTC--SEEEECCCCC--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 68999999999999999999998 8866 55788999999999999987 9999999854
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH--h
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA--M 509 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~--~ 509 (684)
.. ...|+.++.+++++|++.++ ++||+||. +.... ++|..++. .
T Consensus 77 -~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~---~~~~~-------------------~~~~~~~~~~~ 123 (289)
T 3e48_A 77 -HP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYY---ADQHN-------------------NPFHMSPYFGY 123 (289)
T ss_dssp -CS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEES---CCSTT-------------------CCSTTHHHHHH
T ss_pred -cc----------chhhHHHHHHHHHHHHHcCCCEEEEEccc---CCCCC-------------------CCCccchhHHH
Confidence 11 13478899999999999987 59999984 21111 11222222 2
Q ss_pred HhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHH
Q 035631 510 VTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589 (684)
Q Consensus 510 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~ 589 (684)
+|. .....+.++.+.|+..+++... ..+....... ...++.+...++| +|++|+|+++
T Consensus 124 ~e~--~~~~~g~~~~ilrp~~~~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~-----------------i~~~Dva~~~ 181 (289)
T 3e48_A 124 ASR--LLSTSGIDYTYVRMAMYMDPLK-PYLPELMNMH--KLIYPAGDGRINY-----------------ITRNDIARGV 181 (289)
T ss_dssp HHH--HHHHHCCEEEEEEECEESTTHH-HHHHHHHHHT--EECCCCTTCEEEE-----------------ECHHHHHHHH
T ss_pred HHH--HHHHcCCCEEEEeccccccccH-HHHHHHHHCC--CEecCCCCceeee-----------------EEHHHHHHHH
Confidence 222 1233456667777776654321 1111111111 2233455566677 9999999999
Q ss_pred HHHHhcCc--cceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhh
Q 035631 590 IEMARRNC--RGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAK 638 (684)
Q Consensus 590 ~~~~~~~~--~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 638 (684)
+.++.++. +++||++ ++.+|+.|+++.+.+.+|.+..+.+++..+...
T Consensus 182 ~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 231 (289)
T 3e48_A 182 IAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAE 231 (289)
T ss_dssp HHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHH
T ss_pred HHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHH
Confidence 99998773 5699999 999999999999999999988877777665443
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=197.87 Aligned_cols=241 Identities=15% Similarity=0.093 Sum_probs=171.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhccC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
.+.+++||||||+|+||++++++|+++ |++|++++|+... ...+... ....++.++.+|+.|.+++..++...
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDV--LKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 345689999999999999999999999 8999999997421 1111000 00246889999999999888776432
Q ss_pred -----CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 86 -----GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 86 -----~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++|+|||+||.... ....+++...+++|+.++.++++++.. .....+||++||...+..
T Consensus 99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 170 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-------- 170 (302)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--------
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC--------
Confidence 68999999996543 223345667889999999999888753 223579999999876532
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-HHHHHHHHcCCceEEecCCCce
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI-PKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...|.+.+.++.+ ++++++++|||.++++........ ...........+ .
T Consensus 171 ------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p---------~ 235 (302)
T 1w6u_A 171 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---------C 235 (302)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---------T
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC---------c
Confidence 123457999999999999998877 689999999999998732111000 011112222221 1
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHHHHHHHHhC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVAADICTLFK 276 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g 276 (684)
..+.+++|+|++++.++... ..++.|++.+|...++.++++.+.+..|
T Consensus 236 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 236 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 24688999999999998643 2578999999988888888776665543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-22 Score=193.74 Aligned_cols=201 Identities=9% Similarity=0.028 Sum_probs=138.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|||||||||||||++|+++|+++|++| +++.+|++|.+. +.+.++ |+|||+|+..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~--- 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSV--DAVVDALSVP--- 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTC--SEEEECCCCC---
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccC--CEEEECCccC---
Confidence 689999999999999999999999977 567789998887 667776 9999999954
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+ .....+.|+.++.+++++|++.+.++|++||++++....... ..+.+|...+. |.+.|+.+|..+|.+
T Consensus 74 ---~----~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~---~~~~~~~~~~~-~~~~y~~sK~~~e~~ 142 (224)
T 3h2s_A 74 ---W----GSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADH---PMILDFPESAA-SQPWYDGALYQYYEY 142 (224)
T ss_dssp ---T----TSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSS---CGGGGCCGGGG-GSTTHHHHHHHHHHH
T ss_pred ---C----CcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCc---cccccCCCCCc-cchhhHHHHHHHHHH
Confidence 1 112357899999999999999887799999986544322210 01245555555 689999999999966
Q ss_pred h-hHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHH
Q 035631 514 S-YLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592 (684)
Q Consensus 514 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~ 592 (684)
. .....+.++.+.|+..+++.+.... +. .... ....+...++| +|++|+|++++.+
T Consensus 143 ~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-~~~~--~~~~~~~~~~~-----------------i~~~DvA~~~~~~ 199 (224)
T 3h2s_A 143 QFLQMNANVNWIGISPSEAFPSGPATS---YV-AGKD--TLLVGEDGQSH-----------------ITTGNMALAILDQ 199 (224)
T ss_dssp HHHTTCTTSCEEEEEECSBCCCCCCCC---EE-EESS--BCCCCTTSCCB-----------------CCHHHHHHHHHHH
T ss_pred HHHHhcCCCcEEEEcCccccCCCcccC---ce-eccc--ccccCCCCCce-----------------EeHHHHHHHHHHH
Confidence 3 2234566777777776654322111 00 0000 00112223355 9999999999999
Q ss_pred HhcC--ccceeEecCCCcccHHH
Q 035631 593 ARRN--CRGAWNFTNPGVISHNE 613 (684)
Q Consensus 593 ~~~~--~~g~~ni~~~~~~s~~e 613 (684)
++++ .+++|++++.+.-+..+
T Consensus 200 l~~~~~~g~~~~~~~~~~~~~~~ 222 (224)
T 3h2s_A 200 LEHPTAIRDRIVVRDADLEHHHH 222 (224)
T ss_dssp HHSCCCTTSEEEEEECC------
T ss_pred hcCccccCCEEEEecCcchhccc
Confidence 9987 45699999877665543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=9.1e-21 Score=189.85 Aligned_cols=238 Identities=15% Similarity=0.093 Sum_probs=159.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-----CCCCCCceEEEecCCCHHHHHHhhc
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-----SRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++.
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILS 78 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHH
Confidence 346689999999999999999999999 899999999742 1111100 1112457889999999998888774
Q ss_pred c-----CCCCEEEEcCccCCcCC--------CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCccc-ccCC
Q 035631 84 S-----EGIDTIMHFAAQTHVDN--------SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEV-YGET 145 (684)
Q Consensus 84 ~-----~~~d~Vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~v-yg~~ 145 (684)
. .++|+|||+||...... ..+++...+++|+.++.++++++... + .++|++||... +..
T Consensus 79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~- 155 (278)
T 1spx_A 79 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHA- 155 (278)
T ss_dssp HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSC-
T ss_pred HHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccC-
Confidence 2 28999999999754321 33445678899999999999888653 4 79999999766 432
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCCh-HHHH------HHHHHc
Q 035631 146 DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKL-IPKF------ILLAMK 215 (684)
Q Consensus 146 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~-~~~~------~~~~~~ 215 (684)
..+...|+.+|...+.+.+.++.+ ++++++++|||.+.++....... .... ......
T Consensus 156 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (278)
T 1spx_A 156 -------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE 222 (278)
T ss_dssp -------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh
Confidence 123457999999999999888765 58999999999999875321000 0000 111111
Q ss_pred CCceEEecCCCceEecccHHHHHHHHHHHHhcC----CCCcEEEecCCCccCHHHHHHHHHHHh
Q 035631 216 GQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTKKERSVLDVAADICTLF 275 (684)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~~~~t~~e~~~~i~~~~ 275 (684)
..+ ...+.+.+|+|++++.++..+ ..++.|++.+|...++.++++.+.+.+
T Consensus 223 ~~p---------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 223 CVP---------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HCT---------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred cCC---------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 111 124689999999999988642 468899999999999999999888754
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=187.50 Aligned_cols=198 Identities=17% Similarity=0.146 Sum_probs=149.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~Vi 91 (684)
|+||||||+|+||++++++|+++ +|++++|+.. ....+.... .. +++.+|+.|.+.+..++.. .++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~--~~~~~~~~~--~~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAG--ALAELAREV--GA-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHH--HHHHHHHHH--TC-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHH--HHHHHHHhc--cC-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 57999999999999999999976 8999999642 111111000 11 7888999999999888732 2899999
Q ss_pred EcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 92 HFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 92 h~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
|+||.... ....+++...+++|+.++.++++++++.+ .++||++||...|... .+...|+.
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~--------------~~~~~Y~~ 136 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV--------------PGFAAYAA 136 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS--------------TTBHHHHH
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC--------------CCcchHHH
Confidence 99997643 22445677889999999999999997665 7899999998887422 33467999
Q ss_pred HHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHH
Q 035631 168 TKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 168 sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
+|...|.+++.++.+ ++++++++||+.++++... +.+...+.+++++|+|++++.+
T Consensus 137 sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------------~~~~~~~~~~~~~dva~~~~~~ 195 (207)
T 2yut_A 137 AKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------------PLGGPPKGALSPEEAARKVLEG 195 (207)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------------GGTSCCTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------------ccCCCCCCCCCHHHHHHHHHHH
Confidence 999999999988776 5899999999999987410 1112235789999999999999
Q ss_pred HhcCCCCcEEE
Q 035631 245 LHRGVIGHVYN 255 (684)
Q Consensus 245 ~~~~~~~~~~n 255 (684)
+.++..+.+++
T Consensus 196 ~~~~~~~~~~~ 206 (207)
T 2yut_A 196 LFREPVPALLE 206 (207)
T ss_dssp HC--CCCSCCC
T ss_pred HhCCCCccccc
Confidence 98776555443
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-20 Score=181.83 Aligned_cols=214 Identities=18% Similarity=0.194 Sum_probs=162.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
++++||||||+|+||+++++.|+++ |++|++++|+... .....+.++.+|+.|.+++..++...
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~---------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKP---------SADPDIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCC---------CSSTTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhh---------cccCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 4578999999999999999999999 8999999996421 11236889999999999988777432
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+...
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~------------ 162 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPM------------ 162 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCB------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCC------------
Confidence 899999999976432 233445678899999999999887 3444 6899999997765322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
+..+...|+.+|...+.+.+.++.++ ++++.+++||+++++.... .. ........ ....+.++
T Consensus 163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~----~~~~~~~~---------p~~r~~~~ 228 (260)
T 3un1_A 163 VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-ET----HSTLAGLH---------PVGRMGEI 228 (260)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-GG----HHHHHTTS---------TTSSCBCH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-HH----HHHHhccC---------CCCCCcCH
Confidence 22345689999999999999998886 8999999999999985421 11 11122222 12356789
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEecCCCcc
Q 035631 235 ADVAEAFDVILHRG-VIGHVYNVGTKKER 262 (684)
Q Consensus 235 ~D~a~~i~~~~~~~-~~~~~~ni~~~~~~ 262 (684)
+|+|++++.+.... ..++++++.+|...
T Consensus 229 ~dva~av~~L~~~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 229 RDVVDAVLYLEHAGFITGEILHVDGGQNA 257 (260)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence 99999999885544 36789999988654
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=184.06 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=160.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 88 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ..+++++.+|+.|.+++.+++... ++|
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQA--DLDSLVRE--CPGIEPVCVDLGDWEATERALGSVGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH--cCCCCEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34589999999999999999999999 899999999642 11111110 125678899999999999988543 689
Q ss_pred EEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||...... ..++....+++|+.++.++++++... +...++|++||...+.. ..
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------~~ 144 (244)
T 3d3w_A 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--------------VT 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--------------CT
T ss_pred EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC--------------CC
Confidence 9999999754321 22345678899999999998888653 22479999999877642 12
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
+...|+.+|...|.+++.++.+ .+++++++||+.++++........+.......... ....+++++|+
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dv 215 (244)
T 3d3w_A 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHV 215 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHH
Confidence 3467999999999999988766 47999999999999874210000001111222211 12367899999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
|++++.++... ..++.|++.+|..
T Consensus 216 a~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 216 VNAILFLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHcCccccCCCCCEEEECCCcc
Confidence 99999999753 3578999998754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=186.17 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=161.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||++++++|+++ |++|++++|+..... ...+. ....++.++.+|+.|.+++..++..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLR--MEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4588999999999999999999999 899999999742111 01111 0124688999999999998877642
Q ss_pred -CCCCEEEEcCccCC-cC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTH-VD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||... .. ...++....+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------- 157 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN--------- 157 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC---------
Confidence 37999999999754 11 11223456789999999999988864 33 6899999997665321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
+..+...|+.+|...|.+++.++.+ ++++++++||++++++........+.+......+.+ ...+
T Consensus 158 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~ 225 (260)
T 3awd_A 158 ---RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP---------MGRV 225 (260)
T ss_dssp ---SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT---------TSSC
T ss_pred ---CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC---------cCCC
Confidence 1223468999999999999988877 689999999999999854200001223333333222 1247
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
++.+|+|+++..++... ..++.|++.+|.
T Consensus 226 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 226 GQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 89999999999998642 357899998774
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-20 Score=180.90 Aligned_cols=215 Identities=17% Similarity=0.177 Sum_probs=161.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----G 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~ 86 (684)
|+|+||||||+|+||++++++|+++ |++|++++|+.. ...+.++.+|+.|.+++.+++... +
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 66 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP 66 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc------------ccceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 3578999999999999999999999 899999999642 134688999999999988887422 8
Q ss_pred CCEEEEcCccCCcCCCC----C----ChHHHHHHHHHHHHHHHHHHHhcC---------CCcEEEEEeCcccccCCCCCC
Q 035631 87 IDTIMHFAAQTHVDNSF----G----NSFEFTNNNIYGTHVLLEACKLTG---------QVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~----~----~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~~i~~SS~~vyg~~~~~~ 149 (684)
+|+|||+||........ + +....+++|+.++.++++++...- ...+||++||...+...
T Consensus 67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 142 (242)
T 1uay_A 67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---- 142 (242)
T ss_dssp EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----
T ss_pred ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----
Confidence 99999999975432211 1 566788999999999999887531 12399999998887532
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
.+...|+.+|...|.+.+.++.+. +++++++||+.++++... .....+........++.
T Consensus 143 ----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~------ 204 (242)
T 1uay_A 143 ----------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ--GLPEKAKASLAAQVPFP------ 204 (242)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--TSCHHHHHHHHTTCCSS------
T ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh--ccchhHHHHHHhhCCCc------
Confidence 234679999999999998887663 899999999999987431 11223333333332210
Q ss_pred ceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCCccC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKERS 263 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~t 263 (684)
..+++++|+|++++.++.+. ..++.|++.+|..++
T Consensus 205 --~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 205 --PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp --CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred --ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence 24688999999999999864 357899998876543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-22 Score=191.08 Aligned_cols=191 Identities=10% Similarity=-0.049 Sum_probs=140.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC--eEe--------------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI--AFE--------------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~--~v~--------------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|+|+||||||+|+||++++++|+++|+ +|. ++.+|++|.+++.+++ +|+|||+|+..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~----~d~vi~~a~~~--- 76 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS----IDTAFCCLGTT--- 76 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC----CSEEEECCCCC---
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh----hcEEEECeeec---
Confidence 457999999999999999999999998 663 4556777777666655 69999999954
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
. .........+++|+.++.+++++|.+.++ ++|++||..+|+ .|.+.|+.+|..+|.
T Consensus 77 ~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------------------~~~~~y~~sK~~~e~ 134 (215)
T 2a35_A 77 I--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQ 134 (215)
T ss_dssp H--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHH
T ss_pred c--ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------------------CCccHHHHHHHHHHH
Confidence 1 12456778899999999999999999887 599999998874 144689999999998
Q ss_pred hhhHHhhhhh-hhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 513 LSYLEIFVLV-ICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 513 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
+... .+.+ +.+.|+..+++.+....+...+.. .....+++ .++| +|++|+|++++.
T Consensus 135 ~~~~--~~~~~~~~vrp~~v~g~~~~~~~~~~~~~--~~~~~~~~--~~~~-----------------i~~~Dva~~~~~ 191 (215)
T 2a35_A 135 ALQE--QGWPQLTIARPSLLFGPREEFRLAEILAA--PIARILPG--KYHG-----------------IEACDLARALWR 191 (215)
T ss_dssp HHTT--SCCSEEEEEECCSEESTTSCEEGGGGTTC--CCC----C--HHHH-----------------HHHHHHHHHHHH
T ss_pred HHHH--cCCCeEEEEeCceeeCCCCcchHHHHHHH--hhhhccCC--CcCc-----------------EeHHHHHHHHHH
Confidence 7544 2455 677777766654322111111111 11111221 4567 999999999999
Q ss_pred HHhcCccceeEecCCCcccHH
Q 035631 592 MARRNCRGAWNFTNPGVISHN 612 (684)
Q Consensus 592 ~~~~~~~g~~ni~~~~~~s~~ 612 (684)
+++++.++.||+++++.+++.
T Consensus 192 ~~~~~~~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 192 LALEEGKGVRFVESDELRKLG 212 (215)
T ss_dssp HHTCCCSEEEEEEHHHHHHHH
T ss_pred HHhcCCCCceEEcHHHHHHhh
Confidence 999888889999988776654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=184.00 Aligned_cols=222 Identities=15% Similarity=0.120 Sum_probs=159.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
|+++||||||+|+||++++++|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+++.+++..
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAET--LEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME 76 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999 8999999997421 111100 11134688999999999998877742
Q ss_pred --CCCCEEEEcCccCCcCC-------CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN-------SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ .+++|++||...+...
T Consensus 77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------ 149 (250)
T 2cfc_A 77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAF------ 149 (250)
T ss_dssp HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC------
Confidence 27999999999754321 223456788999999977766654 344 6899999998776421
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...|.+.+.++.+. +++++++||++++++........+.+........+ .
T Consensus 150 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~ 212 (250)
T 2cfc_A 150 --------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------Q 212 (250)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------T
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------C
Confidence 234679999999999998887765 89999999999999854210000122232332221 1
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 24678999999999999754 247889998764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-21 Score=192.79 Aligned_cols=232 Identities=16% Similarity=0.131 Sum_probs=164.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.. .....+.++.+|+.|.+++..++...
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIE--RARQAAA-EIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH-HhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34589999999999999999999999 899999999642 1111110 01246788999999999888776432
Q ss_pred -CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
++|+|||+||...... ..+++...+++|+.++.++++++... +...++|++||...+...
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 149 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE----------- 149 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------
Confidence 8999999999754322 33455677899999999999888542 213699999998765321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC---CceEEecCCCceEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG---QQLPIHGNGSNVRS 230 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...|.+.+.++.++ ++++..++||.++++... ....+....... .......+......
T Consensus 150 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 223 (259)
T 4e6p_A 150 ---ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD---GVDALFARYENRPRGEKKRLVGEAVPFGR 223 (259)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH---HHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred ---CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh---hhhhhhhhhccCChHHHHHHHhccCCCCC
Confidence 234579999999999999888764 899999999999987431 111111111111 00111112223356
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
+.+++|+|++++.++... ..+++|++.+|..+|
T Consensus 224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 889999999999888643 357899999887654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-21 Score=192.06 Aligned_cols=244 Identities=16% Similarity=0.107 Sum_probs=175.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCC-CCCCceEEEecCCCHHHHHHhhccC--
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSR-ASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.... ....+.++.+|+.|.+++..++...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999 899999999742111 11111111 1126788999999999888776432
Q ss_pred ---CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|+|||+||.... ....+++...+++|+.++.++++++... ....+||++||...+...
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 158 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH--------- 158 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC---------
Confidence 79999999997321 2233445678899999999999887543 124699999998876322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.+.++...................+ ...+
T Consensus 159 -----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~r~ 224 (281)
T 3svt_A 159 -----RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP---------LPRQ 224 (281)
T ss_dssp -----TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS---------SSSC
T ss_pred -----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC---------CCCC
Confidence 234679999999999999887764 68999999999988742100000112222222221 1245
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC-HHHHHHHHHHHhCCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKERS-VLDVAADICTLFKLEP 279 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t-~~e~~~~i~~~~g~~~ 279 (684)
.+++|+|++++.++... ..++.+++.+|...+ ..++.+.+.+.+|.+.
T Consensus 225 ~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 225 GEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred CCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 78999999999998653 358899999888777 7788888888888653
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-21 Score=189.98 Aligned_cols=214 Identities=9% Similarity=0.011 Sum_probs=147.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhc--CCeE-----------------eeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDK--GIAF-----------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~--g~~v-----------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
++|+||||||+|+||++++++|+++ |++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~ 80 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAV 80 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCC--CEEEEecccc
Confidence 4579999999999999999999999 7876 35678999999999999876 9999999965
Q ss_pred CCCC----------ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCC-C
Q 035631 431 GRPN----------VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN-F 498 (684)
Q Consensus 431 ~~~~----------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~-~ 498 (684)
.... ...........+++|+.++.+++++|++.++ ++|++||..++... .+.. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--------------~~~~~~ 146 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------------HPLNKL 146 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------------CGGGGG
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--------------Cccccc
Confidence 2100 0011122234679999999999999999886 69999999765311 1111 0
Q ss_pred CCChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 499 TRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
..+.|+.+|..+|.+... .+.++.+.|+..+++.... ..... ......+.++ .+ .
T Consensus 147 ~~~~y~~sK~~~e~~~~~--~~i~~~~vrpg~v~~~~~~--~~~~~-~~~~~~~~~~---~~-----------------~ 201 (253)
T 1xq6_A 147 GNGNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGG--VRELL-VGKDDELLQT---DT-----------------K 201 (253)
T ss_dssp GGCCHHHHHHHHHHHHHT--SSSCEEEEEECEEECSCSS--SSCEE-EESTTGGGGS---SC-----------------C
T ss_pred cchhHHHHHHHHHHHHHh--CCCceEEEecceeecCCcc--hhhhh-ccCCcCCcCC---CC-----------------c
Confidence 124577899999877543 4555666666654432210 00000 0000011110 11 3
Q ss_pred ccchhhHHHHHHHHHhcC--ccceeEecCCC---cccHHHHHHHHHhhcCC
Q 035631 579 MTVLDEMLPIAIEMARRN--CRGAWNFTNPG---VISHNEILELYKEYIDP 624 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~---~~s~~e~~~~i~~~~g~ 624 (684)
++|++|+|++++.+++++ .+++||+++++ .+|+.|+++.+.+.+|+
T Consensus 202 ~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 202 TVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp EEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred EEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 499999999999999876 34599999864 59999999999998875
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=185.55 Aligned_cols=231 Identities=19% Similarity=0.116 Sum_probs=157.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCC-----CCCCceEEEecCCCHHHHHHhh
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSR-----ASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~-----~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+..... ...+.... ...++.++.+|+.|.+.+..++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 82 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL 82 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence 35689999999999999999999999 899999999742211 01111100 0146889999999999888776
Q ss_pred ccC-----CC-CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCC
Q 035631 83 VSE-----GI-DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 83 ~~~-----~~-d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~ 148 (684)
... ++ |+|||+||..... ...+++...+++|+.++.++++++... +...+||++||...+...
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 159 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN--- 159 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---
T ss_pred HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---
Confidence 432 34 9999999976432 233456678899999999999988653 213699999997654221
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
.+...|+.+|...|.+.+.++.+ ++++++++||++++++... ...+.+........
T Consensus 160 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~-------- 218 (264)
T 2pd6_A 160 -----------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ--KVPQKVVDKITEMI-------- 218 (264)
T ss_dssp -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGC--------
T ss_pred -----------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh--hcCHHHHHHHHHhC--------
Confidence 23457999999999999888776 6899999999999998542 11111111111111
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHH
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDV 267 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~ 267 (684)
....+.+++|+|+++..++... ..++.+++.+|..++...+
T Consensus 219 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 219 -PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred -CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 1124688999999999998642 3578999998876655443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=185.86 Aligned_cols=223 Identities=14% Similarity=0.104 Sum_probs=147.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+.+..++..
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYE--LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 8999999996421 111100 00124688899999999988877743
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ .+++|++||...+...
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------- 158 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA-------- 158 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCC--------
Confidence 5799999999975432 123345567899999999999988 4444 6899999998775421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...|.+.+.++.+. +++++++||++++++..... ....+........ ....
T Consensus 159 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~ 222 (266)
T 1xq1_A 159 ------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-YDDEFKKVVISRK---------PLGR 222 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh-cCHHHHHHHHhcC---------CCCC
Confidence 234679999999999998887764 89999999999999854211 1111111111111 1124
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+++.+|+|+++..++... ..++.+++.+|..
T Consensus 223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence 688999999999998642 3578999998754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-18 Score=190.85 Aligned_cols=398 Identities=13% Similarity=0.096 Sum_probs=231.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc-------cccccCCCCCCCCCceEEEecCCCHHH----H
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-------SSLKNLHPSRASPNFKFLKGDITCADL----M 78 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-------~~~~~l~~~~~~~~~~~~~~Dl~d~~~----~ 78 (684)
+.++.++||||++.||+++++.|+++ |++|++.+|+... .....+.......+-+ ..+|+.|.++ +
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v 82 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV 82 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence 45688999999999999999999999 8999999875310 1111100000000111 2356666533 2
Q ss_pred HHhhcc-CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCC
Q 035631 79 NYLLVS-EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 79 ~~~~~~-~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
..+... .++|++||+||.... ..+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~---- 157 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGN---- 157 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC----
Confidence 222221 479999999997532 22334566788999999988887764 333 4799999997653211
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
.....|+.+|.....+.+.++.+ +++++..+.|+ +. +.. ... ..+ .
T Consensus 158 ----------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~------T~m----~~~---~~~-------~ 206 (604)
T 2et6_A 158 ----------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR------SRM----TES---IMP-------P 206 (604)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC------CHH----HHT---TSC-------H
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc------Ccc----ccc---cCC-------h
Confidence 11246999999999998888766 48899999996 21 111 100 000 0
Q ss_pred ceEecccHHHHHHHHHHHHhcC--CCCcEEEecCC------------------CccCHHHHHHHHHHHhCCCCCcceeec
Q 035631 227 NVRSYLYCADVAEAFDVILHRG--VIGHVYNVGTK------------------KERSVLDVAADICTLFKLEPEKTIHYV 286 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~--~~~~~~ni~~~------------------~~~t~~e~~~~i~~~~g~~~~~~~~~~ 286 (684)
........+|+|.++..++... ..++.+.+.+| ...+..++.+.+.+...........+.
T Consensus 207 ~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 286 (604)
T 2et6_A 207 PMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDDSRKPEYL 286 (604)
T ss_dssp HHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCCCTTSCGGG
T ss_pred hhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchhhccccccc
Confidence 0012247899999999988653 24667776554 224555555555544332211000000
Q ss_pred cCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHhCCCcccccccCCCCCCceeeccCCCCCCccccccccccc
Q 035631 287 QDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFLHNGYEI 366 (684)
Q Consensus 287 ~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (684)
. .-+ |. ...+ .....+..++.+.. ...+. .. .
T Consensus 287 ------~------------~~~-P~-~~~d-~~~l~~ka~~~~~~--------~~~~~---------------~~----~ 318 (604)
T 2et6_A 287 ------K------------NQY-PF-MLND-YATLTNEARKLPAN--------DASGA---------------PT----V 318 (604)
T ss_dssp ------S------------CBC-CS-SSCC-HHHHHHHHTTSCCC--------CCTTC---------------CC----C
T ss_pred ------c------------ccC-cc-hHHH-HHHHHHHHHhCCcc--------ccccc---------------cc----c
Confidence 0 000 00 0000 00111111111100 00000 00 0
Q ss_pred ccCCceEEEEEcCCcchhHHHHHHHHhcCCeEee----------------------eeccC-CChhH-HHHHHHhc-CCC
Q 035631 367 CGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEF----------------------GTGRL-EDKNS-LLDDMKRV-RPT 421 (684)
Q Consensus 367 ~~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~----------------------~~~d~-~d~~~-~~~~~~~~-~~d 421 (684)
. +..+.++||||++-||..+++.|+++|++|.. ..+|+ .+.+. ++.+.+.+ ++|
T Consensus 319 ~-l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD 397 (604)
T 2et6_A 319 S-LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTID 397 (604)
T ss_dssp C-CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred c-cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence 1 12247999999999999999999999998732 22333 22222 22222322 589
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||.||...... .+.+.+.....+++|+.|+.++.+++.. .+ .++|++||..-+-+. +
T Consensus 398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~---~------------ 462 (604)
T 2et6_A 398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN---F------------ 462 (604)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---T------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---C------------
Confidence 9999999762211 2334556678999999999999988864 22 479999997533100 0
Q ss_pred CCCCCChhhhhhHhHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~ 513 (684)
....|+.||.....+
T Consensus 463 ---~~~~Y~asKaal~~l 477 (604)
T 2et6_A 463 ---GQANYSSSKAGILGL 477 (604)
T ss_dssp ---TBHHHHHHHHHHHHH
T ss_pred ---CChhHHHHHHHHHHH
Confidence 235799999998766
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=182.02 Aligned_cols=224 Identities=13% Similarity=0.106 Sum_probs=158.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.... ...+ .++.+|+.|.+.+..++..
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAA--ALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence 45689999999999999999999999 899999999742 111110000 1245 7889999999988877643
Q ss_pred CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||........ ++....+++|+.++.++++++ ++.+ .++||++||...+...
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----------- 151 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN----------- 151 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC-----------
Confidence 4799999999976543222 234567889999977776665 3444 6899999998776432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
+..|...|+.+|...|.+++.++.+. +++++++||++++++........+.+........+ ...+++
T Consensus 152 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 221 (254)
T 2wsb_A 152 -RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGE 221 (254)
T ss_dssp -SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBC
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCC
Confidence 12234689999999999998887764 89999999999998742100000122222222221 135789
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
++|+|++++.++... ..++.+++.+|.
T Consensus 222 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 222 PSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 999999999998642 357899998763
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6e-20 Score=180.10 Aligned_cols=221 Identities=15% Similarity=0.113 Sum_probs=163.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
+++++|||||+|+||+++++.|+++ |++|++++|.... ....+.. .....++.++.+|+.|.+++..++...
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKE-KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999 8999998875321 1111100 011346788999999999988777432
Q ss_pred --CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 148 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGN---------- 148 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC----------
Confidence 899999999976432 223345568899999999999998 4444 5899999997765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.+.++... .+.+.+........++ ..+.
T Consensus 149 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~r~~ 213 (246)
T 3osu_A 149 ----PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD--ALSDELKEQMLTQIPL---------ARFG 213 (246)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS--CSCHHHHHHHHTTCTT---------CSCB
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc--ccCHHHHHHHHhcCCC---------CCCc
Confidence 23457999999999999888774 4899999999999987542 2334444444443322 2467
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+|+|+++..++... ..++.|++.+|.
T Consensus 214 ~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 214 QDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 7899999999998653 357899998774
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=182.89 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=160.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC-CcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~-~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
+.+|+||||||+|+||++++++|+++ |++|++++|+ .. ....+.. .....++.++.+|+.|.+++..++...
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPA--NIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV 80 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCT--THHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchh--hHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 8999999997 32 1111100 001246889999999999988877422
Q ss_pred ----CCCEEEEcCcc-CCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--------CCCcEEEEEeCcccccCCCCC
Q 035631 86 ----GIDTIMHFAAQ-THVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--------GQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 86 ----~~d~Vih~a~~-~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~i~~SS~~vyg~~~~~ 148 (684)
++|+|||+||. .... ...+.....+++|+.++.++++++... +...++|++||...+..
T Consensus 81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---- 156 (258)
T 3afn_B 81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---- 156 (258)
T ss_dssp HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----
T ss_pred HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----
Confidence 89999999996 3221 122235567899999999998876431 11279999999776531
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+..+...|+.+|...|.+.+.++.+. +++++++||+.++++.... ..+.+......+.+
T Consensus 157 ---------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~------- 218 (258)
T 3afn_B 157 ---------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD--KTQDVRDRISNGIP------- 218 (258)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT--CCHHHHHHHHTTCT-------
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc--cCHHHHHHHhccCC-------
Confidence 11234679999999999998887664 8999999999999985421 12333333333322
Q ss_pred CceEecccHHHHHHHHHHHHhcC----CCCcEEEecCCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTKK 260 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~~ 260 (684)
...+++++|+|++++.++... ..++.|++.+|.
T Consensus 219 --~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 219 --MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp --TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred --CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 136789999999999998652 357899998775
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-20 Score=185.74 Aligned_cols=224 Identities=16% Similarity=0.067 Sum_probs=159.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|... .....+.. .....++.++.+|+.|.+.+..++..
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSS-KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCch-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44589999999999999999999999 899999998321 11111100 00134678899999999998877742
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccc-cCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVY-GETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vy-g~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++...- .-.+||++||...| ...
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 164 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI----------- 164 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----------
Confidence 2899999999975431 2233456788999999999999987641 01699999998876 321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-------C---ChH-HHHHHHHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP-------E---KLI-PKFILLAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-------~---~~~-~~~~~~~~~~~~~~~~ 222 (684)
.+...|+.+|...|.+++.++.++ +++++++||+.++++.... . ... ...........
T Consensus 165 ---~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 236 (274)
T 1ja9_A 165 ---PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----- 236 (274)
T ss_dssp ---CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-----
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC-----
Confidence 223579999999999999887764 8999999999998763110 0 010 22222222221
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
....+++++|+|+++..++..+ ..+++|++.+|
T Consensus 237 ----~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 237 ----PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 2246789999999999999753 25789999876
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=175.59 Aligned_cols=225 Identities=14% Similarity=0.175 Sum_probs=157.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+... ...... .....+.++.+|+.|.+++..++...
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPA--GEEPAA-ELGAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHH--HHHHHH-HhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34589999999999999999999999 8999999997531 111111 11346889999999999988777432
Q ss_pred -CCCEEEEcCccCCcC--------CCCCChHHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCcccccCCCC
Q 035631 86 -GIDTIMHFAAQTHVD--------NSFGNSFEFTNNNIYGTHVLLEACKLT---------GQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~i~~SS~~vyg~~~~ 147 (684)
++|++||+||..... ...+++...+++|+.++.++++++... +...++|++||...+...
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-- 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-- 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC--
Confidence 899999999976432 223456678899999999999988753 124789999998776322
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.|.++... ..............+.
T Consensus 158 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~----- 218 (257)
T 3tpc_A 158 ------------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA--GMPQDVQDALAASVPF----- 218 (257)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSS-----
T ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc--cCCHHHHHHHHhcCCC-----
Confidence 23457999999999999888776 5899999999999887431 1111111111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCCccC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKERS 263 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~t 263 (684)
...+...+|+|+++..++... ..++.+++.+|..++
T Consensus 219 ---~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 219 ---PPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ---SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred ---CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 035688999999999999764 367899998876544
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=178.86 Aligned_cols=222 Identities=14% Similarity=0.004 Sum_probs=159.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++..
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVM--AAQAVVAG-LENGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHT-CTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-HhcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999742 11111111 112678899999999998877742
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+..
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 152 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG------------ 152 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC------------
Confidence 2799999999975432 222345678899999999998887642 21479999999776532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 222 (684)
..+...|+.+|...+.+.+.++.+. +++++++||+.++++... ... ...........
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----- 223 (263)
T 3ak4_A 153 --APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE--REIIWEAELRGMTPEAVRAEYVSLT----- 223 (263)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH--HHHHHHHHHHTSCHHHHHHHHHHTC-----
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh--hhccccccccccCcHHHHHHHHhcC-----
Confidence 1234579999999999998887664 899999999999886321 110 11111111111
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
....+.+++|+|++++.++..+ ..++.|++.+|..
T Consensus 224 ----p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 224 ----PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred ----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 1235789999999999998653 3578999988754
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-18 Score=171.81 Aligned_cols=223 Identities=13% Similarity=0.043 Sum_probs=150.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+... . ..++..+.+|+.|.+++..++..
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~------~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQ------E----QYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCS------S----CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhh------h----cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999997421 1 11378899999999998877742
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+..
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~------------ 139 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTP------------ 139 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC------------
Confidence 2799999999975432 123456678899999999999888 3444 589999999877532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHH-HHHcCCceEEecCCCceEecc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFIL-LAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|...|.+.+.++.+ +++++++++|++++++............. ...... ...........+.
T Consensus 140 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~ 215 (250)
T 2fwm_X 140 --RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLGKIA 215 (250)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcccccCCCCCCc
Confidence 223467999999999999888766 38999999999999875321000000000 000000 0000001112468
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 216 RPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 8999999999998653 3578899987753
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-20 Score=183.95 Aligned_cols=225 Identities=14% Similarity=0.117 Sum_probs=161.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCC--C-CCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR--A-SPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~--~-~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.... . ..++.++.+|+.|.+++..++..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVD--RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999 899999999742 111110000 0 24688899999999988877742
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...|...
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 151 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPL-------- 151 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC--------
Confidence 2799999999975432 1223456788999999999888874 334 6899999998877432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGQQL 219 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~ 219 (684)
.+...|+.+|...+.+.+.++.+ ++++++++|||+++++... ... ..+........
T Consensus 152 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (263)
T 3ai3_A 152 ------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI--KTAKELTKDNGGDWKGYLQSVADEH-- 221 (263)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH--HHHHHHTTTTTCCHHHHHHHHHHHH--
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh--hhhHhhhcccCCcHHHHHHHHHhcC--
Confidence 23457999999999999888776 5899999999999987421 111 11111111110
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.....+.+++|+|++++.++..+ ..++.|++.+|...+
T Consensus 222 ------~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 ------APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp ------CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred ------CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 01135789999999999998753 257899999886654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=179.31 Aligned_cols=220 Identities=17% Similarity=0.169 Sum_probs=149.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||++++++|+++ |++|+++ +|+.. ....+.. .....++.++.+|+.|.+.+..++..
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPAST--SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAM 78 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCS--HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34589999999999999999999999 8999999 55432 1111100 00134688999999999998877643
Q ss_pred ---CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccc-ccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEV-YGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~v-yg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++.. .+ ..+||++||... |+.
T Consensus 79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------- 149 (247)
T 2hq1_A 79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGN-------- 149 (247)
T ss_dssp HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC--------
Confidence 289999999997542 224456778999999998888887753 34 689999999743 432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.+...|+.+|...|.+.+.++.+. ++++++++|+.+.++... .+............+ ..
T Consensus 150 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~ 211 (247)
T 2hq1_A 150 -------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD--VLPDKVKEMYLNNIP---------LK 211 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHTTST---------TS
T ss_pred -------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh--hcchHHHHHHHhhCC---------CC
Confidence 123579999999999998887664 789999999999775211 111222222222221 13
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+++++|+|+++..++..+ ..++.|++.+|.
T Consensus 212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 212 RFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 5789999999999888653 357899998774
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=181.05 Aligned_cols=234 Identities=17% Similarity=0.130 Sum_probs=159.6
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
+..+++++||||||+|+||+++++.|+++ |++|++++|+... ....+. .......+.++.+|+.|.+++..++.
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 96 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPD-EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMA 96 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHH-HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence 44556789999999999999999999999 8999999985321 111110 01123568889999999999887764
Q ss_pred c-----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCC
Q 035631 84 S-----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 84 ~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
. .++|+|||+||...... ..+++...+++|+.++.++++++ ++.+ ..++|++||...+...
T Consensus 97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----- 170 (281)
T 3v2h_A 97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVAS----- 170 (281)
T ss_dssp HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----
T ss_pred HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCC-----
Confidence 3 28999999999764322 33445678899999999999987 3434 5799999997765321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHH--HHcCCc-eEEecC
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILL--AMKGQQ-LPIHGN 224 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ 224 (684)
.....|+.+|...+.+.+.++.++ ++++..++||.+.++... ...+..... ...... ......
T Consensus 171 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
T 3v2h_A 171 ---------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE--KQIPDQARTRGITEEQVINEVMLK 239 (281)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchh--hhcchhhhhcCCCHHHHHHHHHHh
Confidence 223579999999999998887764 799999999999987431 111110000 000000 011223
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.....+.+++|+|++++.++... ..|+.+++.+|.
T Consensus 240 ~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 240 GQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred cCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 334457899999999999998653 368899998774
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=185.55 Aligned_cols=214 Identities=15% Similarity=0.177 Sum_probs=155.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
+|+|||||||||||++++++|+++|++| +++.+|++|.+++.++++++ |+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC--CEEE
Confidence 5699999999999999999999999876 23567889999999999987 9999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-Ce-EEEEecceeeecCCCCCCCCCCCCccCCCCCCC-CC
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT-RS 501 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p-~~ 501 (684)
|+|+.. .. ..|+.++.+++++|++.+ ++ +|+ | +||..... . +.+.. | .+
T Consensus 82 ~~a~~~---~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~-------~--~~~~~-p~~~ 133 (313)
T 1qyd_A 82 SALAGG---VL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDI-------M--EHALQ-PGSI 133 (313)
T ss_dssp ECCCCS---SS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTS-------C--CCCCS-STTH
T ss_pred ECCccc---cc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCccc-------c--ccCCC-CCcc
Confidence 999954 11 137889999999999998 75 653 2 46532211 1 12222 4 45
Q ss_pred hhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhh----ccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 502 FYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVC----TLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
.| .+|..+|.+.. ..+.++.+.|+..+++... ..+.... .....+.+++++...++|
T Consensus 134 ~y-~sK~~~e~~~~--~~g~~~~ilrp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--------------- 194 (313)
T 1qyd_A 134 TF-IDKRKVRRAIE--AASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDKVLIYGDGNVKGIW--------------- 194 (313)
T ss_dssp HH-HHHHHHHHHHH--HTTCCBCEEECCEEHHHHT-TTSSCTTCCSSCCSSEECCBTTSCSEEEE---------------
T ss_pred hH-HHHHHHHHHHH--hcCCCeEEEEeceeccccc-cccccccccccCCCCeEEEeCCCCceEEE---------------
Confidence 68 99999998754 3456677777776654322 2111110 112234556777777888
Q ss_pred CccchhhHHHHHHHHHhcC--ccceeEecCC-CcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 578 SMTVLDEMLPIAIEMARRN--CRGAWNFTNP-GVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
+|++|++++++.+++++ .++.|+++++ +.+|+.|+++.+.+.+|.+.....++..+
T Consensus 195 --i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 253 (313)
T 1qyd_A 195 --VDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 253 (313)
T ss_dssp --ECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred --EEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHHH
Confidence 99999999999999876 3567888765 68999999999999999887776666543
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=185.77 Aligned_cols=240 Identities=17% Similarity=0.155 Sum_probs=164.9
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc----------cccCCC--CCCCCCceEEEecCCC
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS----------LKNLHP--SRASPNFKFLKGDITC 74 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~l~~--~~~~~~~~~~~~Dl~d 74 (684)
|..+.++++|||||+|+||+++++.|+++ |++|++++|+..... ...... .....++.++.+|+.|
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD 82 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 44556789999999999999999999999 899999999642110 000000 0123468899999999
Q ss_pred HHHHHHhhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCccc
Q 035631 75 ADLMNYLLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEV 141 (684)
Q Consensus 75 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~v 141 (684)
.+++..++.. .++|++||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 161 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLG 161 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhh
Confidence 9998877643 2899999999976532 2334456788999999999999863 333 579999999877
Q ss_pred ccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCc
Q 035631 142 YGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ 218 (684)
Q Consensus 142 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 218 (684)
+.. ..+...|+.+|...+.+.+.++.+ +++++..++||+|+++..........+.........
T Consensus 162 ~~~--------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 227 (281)
T 3s55_A 162 HSA--------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTL 227 (281)
T ss_dssp GSC--------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCH
T ss_pred cCC--------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccch
Confidence 532 223457999999999999988876 489999999999999864211000000000000000
Q ss_pred ----eEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 219 ----LPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 219 ----~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
..+.........+.+++|+|++++.++... ..++++++.+|...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 228 KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 000000112246889999999999999753 357899999886544
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-19 Score=176.45 Aligned_cols=220 Identities=17% Similarity=0.104 Sum_probs=163.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+... ....... ...++.++.+|+.|.+++..++...
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETD--LAGAAAS-VGRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSC--HHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 8999999997521 1111100 1346788999999999988777432
Q ss_pred -CCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 -~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|++||+||.... ....+++...+++|+.++.++++++ ++.+ ..++|++||...+..
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---------- 152 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAA---------- 152 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSB----------
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCC----------
Confidence 89999999997632 2233445678899999999999998 5554 689999999877632
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.++++.... ..............+. ..+
T Consensus 153 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~---------~r~ 218 (271)
T 3tzq_B 153 ----YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV-GLPQPIVDIFATHHLA---------GRI 218 (271)
T ss_dssp ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT---------SSC
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc-cCCHHHHHHHHhcCCC---------CCC
Confidence 223457999999999999988877 58999999999999986431 1112233333322211 245
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+|+|++++.++... ..++.+++.+|
T Consensus 219 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 219 GEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 78999999999998653 36789999887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=181.67 Aligned_cols=238 Identities=17% Similarity=0.139 Sum_probs=166.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc----------ccccCCC--CCCCCCceEEEecCCCHH
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS----------SLKNLHP--SRASPNFKFLKGDITCAD 76 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~~~l~~--~~~~~~~~~~~~Dl~d~~ 76 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+.... ....... .....++.++.+|+.|.+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE 87 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 445689999999999999999999999 89999999863211 0000000 011346889999999999
Q ss_pred HHHHhhcc-----CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCC
Q 035631 77 LMNYLLVS-----EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 77 ~~~~~~~~-----~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~ 147 (684)
++..++.. .++|+|||+||........+++...+++|+.++.++++++.. .+...++|++||...+.....
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 167 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS 167 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc
Confidence 98887743 289999999998765544556778899999999999998743 222479999999876532210
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHH-HHHHcCCceEEec
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFI-LLAMKGQQLPIHG 223 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (684)
+..+...|+.+|...+.+.+.++.++ ++++..++||.|.++.... ....... .............
T Consensus 168 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (278)
T 3sx2_A 168 ----------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN-EFTREWLAKMAAATDTPGAMG 236 (278)
T ss_dssp ----------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS-HHHHHHHHHHHHHCC--CTTS
T ss_pred ----------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh-hhHHHHHhhccchhhhhhhhh
Confidence 11233579999999999998887664 6999999999999885421 1222222 1222222111122
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.... ..+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 237 ~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 237 NAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp CSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 2222 57889999999999998643 467899998774
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.3e-20 Score=183.07 Aligned_cols=231 Identities=13% Similarity=0.095 Sum_probs=163.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+..... ...+.. ....++.++.+|+.|.+++..++..
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGK-EFGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHH-HHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHH-hcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 44578999999999999999999999 899999999642111 001100 0134688999999999988777642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...++....+++|+.++.++++++... +...+||++||...+......
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------ 162 (265)
T 1h5q_A 89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------ 162 (265)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc------
Confidence 3599999999975432 123345567899999999999988543 324799999998775432110
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+..+...|+.+|...|.+++.++.+. +++++++||++++++.... ..+..........+ ...+
T Consensus 163 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~ 230 (265)
T 1h5q_A 163 -LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH--MDKKIRDHQASNIP---------LNRF 230 (265)
T ss_dssp -TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCT---------TSSC
T ss_pred -ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc--cchhHHHHHHhcCc---------ccCC
Confidence 1223456789999999999998887663 8999999999999875321 11222222222221 1246
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+.+|+|++++.++..+ ..++.|++.+|..
T Consensus 231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 231 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 78999999999998653 4678999998753
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=180.14 Aligned_cols=225 Identities=10% Similarity=0.016 Sum_probs=159.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|+||||||+|+||++++++|+++ |++|++++|+..... ...+.. ...++.++.+|+.|.+++..++..
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRS--KGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999742111 011110 123578899999999988877643
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------- 152 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA--------- 152 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC---------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC---------
Confidence 4799999999975421 2233456788999999999999884 334 689999999876532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCceEEecCCCc
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF---PEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
..+...|+.+|...|.+.+.++.+. ++++++++||.+.++... ...-....+....... .
T Consensus 153 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~ 218 (260)
T 2ae2_A 153 -----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------A 218 (260)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------T
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------C
Confidence 1234579999999999999888764 799999999999875210 0000001001111111 1
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
...+.+.+|+|++++.++... ..++.+++.+|...
T Consensus 219 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 219 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 135789999999999988643 35789999887543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=178.95 Aligned_cols=228 Identities=14% Similarity=0.077 Sum_probs=163.3
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+ |+||+++++.|+++ |++|++++|+.... ....+... ...+.++.+|+.|.+++..++..
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEA--LGGALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHH--TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEECCCCCHHHHHHHHHHHH
Confidence 346899999999 99999999999999 89999999975210 11111110 12378899999999988877643
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------- 153 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-------- 153 (261)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB--------
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC--------
Confidence 279999999997542 22334566788999999999999998641 0259999999766532
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|...+.+.+.++.+. ++++++++||+++++........+.+........++ .
T Consensus 154 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~ 218 (261)
T 2wyu_A 154 ------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------R 218 (261)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------S
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------C
Confidence 1223579999999999998887764 899999999999987532111223333333222211 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
.+.+++|+|++++.++... ..++.|++.+|...+.
T Consensus 219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 3568999999999998642 3578999998865543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-20 Score=190.28 Aligned_cols=205 Identities=11% Similarity=0.027 Sum_probs=149.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeecc-CCChhHHHHHHHhcCCCeEEEcce
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGR-LEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d-~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
+|+|||||||||||++|+++|+++|++| .++.+| ++|.+++.++++++ |+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~--d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcC--CEEEEcCC
Confidence 4799999999999999999999999876 244579 99999999999887 99999987
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecce--eeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGC--IYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~--vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
.. . ...|..+ .+++++|++.+ + ++||+||.. .|+ . . +.+.|+
T Consensus 83 ~~---~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~-----------------~-~-~~~~y~ 128 (352)
T 1xgk_A 83 SQ---A-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG-----------------P-W-PAVPMW 128 (352)
T ss_dssp ST---T-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS-----------------S-C-CCCTTT
T ss_pred CC---C-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC-----------------C-C-CCccHH
Confidence 32 1 1236666 99999999998 6 699999985 221 1 1 346899
Q ss_pred hhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhh-----ccccc-cceecCCCCCchHHHHhhhcccccccCCC
Q 035631 505 KTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVC-----TLRLR-MPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 505 ~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
.+|..+|++.... +.++.+.|+..+ +.+........+ ..+.. +.+.+++++.++|
T Consensus 129 ~sK~~~E~~~~~~--gi~~~ivrpg~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------- 189 (352)
T 1xgk_A 129 APKFTVENYVRQL--GLPSTFVYAGIY-NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPW---------------- 189 (352)
T ss_dssp HHHHHHHHHHHTS--SSCEEEEEECEE-GGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEE----------------
T ss_pred HHHHHHHHHHHHc--CCCEEEEeccee-cCCchhcccccccccccCCCceEEeeccCCCCceee----------------
Confidence 9999999876442 556666665533 333211111111 01110 1234556666677
Q ss_pred ccch-hhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCc
Q 035631 579 MTVL-DEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFN 632 (684)
Q Consensus 579 ~i~v-~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 632 (684)
+|+ +|+|++++.+++++ .+++||+++ +.+|+.|+++.+.+.+|.+..+.+++
T Consensus 190 -i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 190 -LDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp -ECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred -EecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence 999 89999999999875 367999985 68999999999999999876665554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=175.57 Aligned_cols=201 Identities=15% Similarity=0.112 Sum_probs=144.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCC--cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPD--YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
++++||||||+|+||+++++.|+++ | ++|++++|+... ...+... ...++.++.+|+.|.+.+..++...
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~--~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEK--ATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGG--CHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHH--HHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999 7 999999997432 2222211 2457899999999999888777422
Q ss_pred ----CCCEEEEcCccCC-c----CCCCCChHHHHHHHHHHHHHHHHHHHhc----------CC----CcEEEEEeCcccc
Q 035631 86 ----GIDTIMHFAAQTH-V----DNSFGNSFEFTNNNIYGTHVLLEACKLT----------GQ----VKRFIHVSTDEVY 142 (684)
Q Consensus 86 ----~~d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~----~~~~i~~SS~~vy 142 (684)
++|+|||+||... . ....++....+++|+.++.++++++... +. ..+||++||...+
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 7999999999765 2 1222345568899999999998887542 21 4799999998775
Q ss_pred cCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCce
Q 035631 143 GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQL 219 (684)
Q Consensus 143 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 219 (684)
..... ...+..+...|+.+|...|.+++.++.++ ++++++++||++.++....
T Consensus 157 ~~~~~-------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------- 212 (250)
T 1yo6_A 157 ITDNT-------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------- 212 (250)
T ss_dssp STTCC-------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------
T ss_pred cCCcc-------cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------
Confidence 43211 11222456689999999999999888775 8999999999987653210
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
..+++.+|+|++++.++....
T Consensus 213 ---------~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 213 ---------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp ---------------HHHHHHHHHHHTTCC
T ss_pred ---------CCCCCHHHHHHHHHHHHhccc
Confidence 134778999999999997653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-20 Score=186.73 Aligned_cols=210 Identities=14% Similarity=0.147 Sum_probs=152.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
+++||||||||+||++++++|+++|++| +++.+|++|.+++.++++++ |+|||+|+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~--d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKV--DVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCC--CEEEECCc
Confidence 3489999999999999999999999866 35678899999999999987 99999998
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC-CChhhhh
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT-RSFYSKT 506 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p-~~~Y~~s 506 (684)
.. ++.++.+++++|++.+ ++.++.| +||.. .+|.++.. | ...| .+
T Consensus 89 ~~------------------~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~----------~~~~~~~~-p~~~~y-~s 135 (318)
T 2r6j_A 89 FP------------------QILDQFKILEAIKVAGNIKRFLPS---DFGVE----------EDRINALP-PFEALI-ER 135 (318)
T ss_dssp GG------------------GSTTHHHHHHHHHHHCCCCEEECS---CCSSC----------TTTCCCCH-HHHHHH-HH
T ss_pred hh------------------hhHHHHHHHHHHHhcCCCCEEEee---ccccC----------cccccCCC-CcchhH-HH
Confidence 33 1567899999999998 7533333 35521 12223333 4 3568 99
Q ss_pred hHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHH
Q 035631 507 KAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEML 586 (684)
Q Consensus 507 K~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~ 586 (684)
|..+|.+... .+.++.+.|+..+++.. ...+.........+.+++++...++| +|++|++
T Consensus 136 K~~~e~~~~~--~~~~~~~lr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------i~~~Dva 195 (318)
T 2r6j_A 136 KRMIRRAIEE--ANIPYTYVSANCFASYF-INYLLRPYDPKDEITVYGTGEAKFAM-----------------NYEQDIG 195 (318)
T ss_dssp HHHHHHHHHH--TTCCBEEEECCEEHHHH-HHHHHCTTCCCSEEEEETTSCCEEEE-----------------ECHHHHH
T ss_pred HHHHHHHHHh--cCCCeEEEEcceehhhh-hhhhccccCCCCceEEecCCCceeeE-----------------eeHHHHH
Confidence 9999877543 45566667776555432 22222222222335566777778888 9999999
Q ss_pred HHHHHHHhcC--ccceeEecC-CCcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 587 PIAIEMARRN--CRGAWNFTN-PGVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 587 ~~~~~~~~~~--~~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
++++.+++++ .++.|++.+ ++.+|+.|+++.+.+.+|.+..+..++..+
T Consensus 196 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (318)
T 2r6j_A 196 LYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEE 247 (318)
T ss_dssp HHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred HHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 9999999876 355788765 478999999999999999877666655443
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=177.40 Aligned_cols=228 Identities=13% Similarity=0.074 Sum_probs=164.3
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
|..+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ....++.++.+|+.|.+++..++..
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQ-LGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHT-TSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh-hCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 44456789999999999999999999999 899999999742111 011111 1124688999999999998877642
Q ss_pred -----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|++||+||...... ..+++...+++|+.++.++++++... + ..++|++||...+-
T Consensus 82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-------- 152 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPI-------- 152 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTT--------
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcc--------
Confidence 28999999999764322 23345567899999999998887653 4 58999999965421
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+..+...|+.+|...+.+.+.++.+ +++++..++||.++++.... .............+.
T Consensus 153 -----~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~--------- 216 (262)
T 3pk0_A 153 -----TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE--NGEEYIASMARSIPA--------- 216 (262)
T ss_dssp -----BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT--TCHHHHHHHHTTSTT---------
T ss_pred -----CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc--cCHHHHHHHHhcCCC---------
Confidence 01223467999999999999998877 58999999999999873211 112333333332221
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
..+...+|+|+++..++... ..++.+++.+|..+
T Consensus 217 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 217 GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 23578899999999998653 46789999887643
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-20 Score=179.87 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=156.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-C--CCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-R--ASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~--~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++||||||+|+||++++++|+++ |++|++++|+.. ....+... . ....+.++.+|+.|.+++..++..
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGE--RAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999 899999999642 11111000 0 124688899999999998887742
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ .++||++||...+...
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------- 151 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGN--------- 151 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCC---------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCC---------
Confidence 2799999999976432 223345678899999997666655 3444 6899999997654221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...|.+.+.++.+ .+++++++||+.++++... .+...+........+ ...+
T Consensus 152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~~~ 215 (248)
T 2pnf_A 152 -----VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA--VLSEEIKQKYKEQIP---------LGRF 215 (248)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG--GSCHHHHHHHHHTCT---------TSSC
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh--hccHHHHHHHHhcCC---------CCCc
Confidence 12357999999999999888765 3789999999999987532 111222222222211 1257
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
++++|+|+++..++... ..++.|++.+|
T Consensus 216 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 216 GSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 89999999999998652 35789999876
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-20 Score=182.60 Aligned_cols=225 Identities=15% Similarity=0.094 Sum_probs=160.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+. .....+..+.+|+.|.+++..++..
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQ--GEGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999742111 01111 1124678899999999988777642
Q ss_pred ---CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..+||++||...|...
T Consensus 87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------- 158 (260)
T 2zat_A 87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPF------- 158 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCC-------
Confidence 279999999996431 12233456788999999998888874 344 6899999998877421
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.+.++... ... ........... .
T Consensus 159 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~---------~ 220 (260)
T 2zat_A 159 -------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ--VLWMDKARKEYMKESL---------R 220 (260)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH--HHHSSHHHHHHHHHHH---------T
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch--hcccChHHHHHHHhcC---------C
Confidence 234579999999999998887764 899999999999876421 000 00011111100 1
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
...+.+.+|+|+++..++..+ ..++++++.+|...+
T Consensus 221 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 221 IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 125788999999999998653 257899999887665
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=174.18 Aligned_cols=227 Identities=15% Similarity=0.101 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+... ..+.... .. .++.+|+.|.+++..++..
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~--~~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG---KEVAEAI--GG-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH---HHHHHHH--TC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH---HHHHHHh--hC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 345689999999999999999999999 8999999997532 1110000 13 7889999999988777643
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~---------- 143 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE---------- 143 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC----------
Confidence 27999999999764322 1223457889999999999888753 33 6899999998765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHH-cCCceEEecCCCceEec
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAM-KGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...|.+.+.++.+. ++++++++||.+.++. ...+..... ................+
T Consensus 144 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
T 2d1y_A 144 ----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA------VLEAIALSPDPERTRRDWEDLHALRRL 213 (256)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH------HHHHHC--------CHHHHTTSTTSSC
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch------hhhccccccCCHHHHHHHHhcCCCCCC
Confidence 223579999999999998887663 7899999999987642 111100000 00000001111122467
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
++++|+|++++.++..+ ..++.|++.+|...+.
T Consensus 214 ~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 214 GKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred cCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 89999999999998753 3578999998865443
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=179.91 Aligned_cols=223 Identities=14% Similarity=0.101 Sum_probs=158.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC-CCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK-LDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++| +.. ....+.. .....++.++.+|+.|.+.+.+++..
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKED--EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999 421 1111100 00124578899999999988877642
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...+||++||...+.
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 150 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI---------- 150 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----------
Confidence 2799999999975432 223345678899999999888877542 2147999999976542
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
+..+...|+.+|...|.+.+.++.+. +++++++||++++++... ... +..........+ .
T Consensus 151 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~---------~ 215 (261)
T 1gee_A 151 ----PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA--EKFADPEQRADVESMIP---------M 215 (261)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH--HHHHSHHHHHHHHTTCT---------T
T ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh--hcccChhHHHHHHhcCC---------C
Confidence 22345689999999999988887664 899999999999987431 110 122222222111 1
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+++.+|+|++++.++... ..++.+++.+|..
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 25789999999999998642 3578999988754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=178.84 Aligned_cols=224 Identities=16% Similarity=0.219 Sum_probs=160.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
++++||||||+|+||++++++|+++ |++|++++|+.... ...+.. .....++.++.+|+.|.+++.+++...
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTA-METMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4588999999999999999999999 89999997764211 111110 111246889999999999988877432
Q ss_pred --CCCEEEEcCccC--Cc----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQT--HV----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 --~~d~Vih~a~~~--~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|+|||+||.. .. ....++....+++|+.++.++++++ ++.+ ..++|++||...++..
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-------- 153 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAP-------- 153 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCC--------
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccC--------
Confidence 899999999942 11 2223445678899999999999988 4544 6899999997554221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
+..+...|+.+|+..+.+.+.++.+ .++++..++||.++++... .............. ....
T Consensus 154 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~---------p~~r 218 (264)
T 3i4f_A 154 ----GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE--ATIQEARQLKEHNT---------PIGR 218 (264)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS--CCHHHHHHC-----------------C
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch--hccHHHHHHHhhcC---------CCCC
Confidence 2234468999999999999888776 5899999999999988542 23333222221111 1234
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+.+.+|+|+++..++... ..++++++.+|-.
T Consensus 219 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~ 252 (264)
T 3i4f_A 219 SGTGEDIARTISFLCEDDSDMITGTIIEVTGAVD 252 (264)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCcEEEEcCcee
Confidence 678999999999999753 3588999988754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.1e-20 Score=179.85 Aligned_cols=219 Identities=17% Similarity=0.149 Sum_probs=153.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceE-EEecCCCHHHHHHhhcc---
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKF-LKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~-~~~Dl~d~~~~~~~~~~--- 84 (684)
+++||||||+|+||++++++|+++ |++|+++ +|+.. ....+.. .....++.. +.+|+.|.+.+..++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNRE--KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHH--HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999 8999998 77632 1111100 001234566 89999999988877532
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHH----HHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVL----LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...++....+++|+.++.++ +..+++.+ .++||++||...+...
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------- 146 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGN--------- 146 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC---------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCC---------
Confidence 3799999999976421 22334567889999995554 45555555 6899999997654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...|.+.+.++.+. +++++++||+.++++... ...+.+........+ ...+
T Consensus 147 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~~~ 210 (245)
T 2ph3_A 147 -----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE--RLPQEVKEAYLKQIP---------AGRF 210 (245)
T ss_dssp -----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHHTCT---------TCSC
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh--hcCHHHHHHHHhcCC---------CCCC
Confidence 123579999999999998887664 899999999999987421 111222222222221 1357
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
++++|+|+++..++..+ ..++.|++.+|.
T Consensus 211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 89999999999998653 357899998764
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=179.42 Aligned_cols=226 Identities=14% Similarity=0.080 Sum_probs=162.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. .....+.++.+|+.|.+++..++..
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGE-LGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTT-SSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh-hCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999753211 111111 1124788999999999987776643
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+-.
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~--------- 184 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVT--------- 184 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTB---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccC---------
Confidence 27999999999764322 334456788999999999999883 444 589999999764210
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
+..+...|+.+|...+.+.+.++.+ +++++..++||+|+++... .....+........++ ..
T Consensus 185 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~r 249 (293)
T 3rih_A 185 ----GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV--DMGEEYISGMARSIPM---------GM 249 (293)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH--HTCHHHHHHHHTTSTT---------SS
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh--hccHHHHHHHHhcCCC---------CC
Confidence 1123467999999999999988776 4899999999999987421 1112333333333322 13
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
+...+|+|+++..++... ..|+.+++.+|..+
T Consensus 250 ~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 250 LGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 457899999999998643 36789999887643
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=184.61 Aligned_cols=210 Identities=20% Similarity=0.224 Sum_probs=151.9
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe---------------------------eeeccCCChhHHHHHHHhcCCCeE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------------FGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
||+|+|||||||||++++++|+++|++|. ++.+|++|.+++.++++++ |+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC--CEE
Confidence 46899999999999999999999998762 3557888999999999987 999
Q ss_pred EEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC-CC
Q 035631 424 LNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT-RS 501 (684)
Q Consensus 424 ih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p-~~ 501 (684)
||+|+.. ++.++.+++++|++.+ ++.++.| +||.. .+|.++.. | .+
T Consensus 82 i~~a~~~------------------~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~----------~~~~~~~~-p~~~ 129 (308)
T 1qyc_A 82 ISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPS---EFGND----------VDNVHAVE-PAKS 129 (308)
T ss_dssp EECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECS---CCSSC----------TTSCCCCT-THHH
T ss_pred EECCcch------------------hhhhHHHHHHHHHhcCCCceEeec---ccccC----------ccccccCC-cchh
Confidence 9999843 1557889999999998 7533333 35421 12233333 4 35
Q ss_pred hhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhh---hccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 502 FYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENV---CTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
.| .+|..+|.+... .+.++.+.|+..+++... ..+... ......+.+++++...++|
T Consensus 130 ~y-~sK~~~e~~~~~--~~~~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 189 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA--EGIPYTYVSSNCFAGYFL-RSLAQAGLTAPPRDKVVILGDGNARVVF---------------- 189 (308)
T ss_dssp HH-HHHHHHHHHHHH--HTCCBEEEECCEEHHHHT-TTTTCTTCSSCCSSEEEEETTSCCEEEE----------------
T ss_pred HH-HHHHHHHHHHHh--cCCCeEEEEeceeccccc-cccccccccCCCCCceEEecCCCceEEE----------------
Confidence 68 999999876542 355666667766654322 111111 1122235566777778888
Q ss_pred ccchhhHHHHHHHHHhcC--ccceeEecCC-CcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 579 MTVLDEMLPIAIEMARRN--CRGAWNFTNP-GVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
+|++|++++++.+++++ .++.|+++++ +.+|+.|+++.+.+.+|.+.....++..+
T Consensus 190 -i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 248 (308)
T 1qyc_A 190 -VKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE 248 (308)
T ss_dssp -ECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred -ecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHHH
Confidence 99999999999999866 3457888764 68999999999999999877766665443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=185.21 Aligned_cols=209 Identities=14% Similarity=0.147 Sum_probs=152.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEe---------------------------eeeccCCChhHHHHHHHhcCCCe
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------------FGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
+||+|+||||||+||++++++|+++|++|. ++.+|++|.+++.++++++ |+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~--d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV--DI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC--CE
Confidence 356999999999999999999999998762 3457888999999999987 99
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-Ce-EEEEecceeeecCCCCCCCCCCCCccCCCCCCC-
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT- 499 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p- 499 (684)
|||+|+.. ++.++.+++++|.+.+ ++ +| . | +||.. .+|.++.. |
T Consensus 81 vi~~a~~~------------------~~~~~~~l~~aa~~~g~v~~~v-~-S--~~g~~----------~~~~~~~~-p~ 127 (321)
T 3c1o_A 81 VISALPFP------------------MISSQIHIINAIKAAGNIKRFL-P-S--DFGCE----------EDRIKPLP-PF 127 (321)
T ss_dssp EEECCCGG------------------GSGGGHHHHHHHHHHCCCCEEE-C-S--CCSSC----------GGGCCCCH-HH
T ss_pred EEECCCcc------------------chhhHHHHHHHHHHhCCccEEe-c-c--ccccC----------ccccccCC-Cc
Confidence 99999843 1567899999999998 75 55 2 2 45521 12333333 4
Q ss_pred CChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhh---hccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 500 RSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENV---CTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.+.| .+|..+|.+.. ..+.++.+.|+..+++... ..+... ......+.+++++...++|
T Consensus 128 ~~~y-~sK~~~e~~~~--~~~~~~~~lrp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 189 (321)
T 3c1o_A 128 ESVL-EKKRIIRRAIE--AAALPYTYVSANCFGAYFV-NYLLHPSPHPNRNDDIVIYGTGETKFVL-------------- 189 (321)
T ss_dssp HHHH-HHHHHHHHHHH--HHTCCBEEEECCEEHHHHH-HHHHCCCSSCCTTSCEEEETTSCCEEEE--------------
T ss_pred chHH-HHHHHHHHHHH--HcCCCeEEEEeceeccccc-cccccccccccccCceEEecCCCcceeE--------------
Confidence 4679 99999998764 3456666777776655432 222221 1122235566777777888
Q ss_pred CCccchhhHHHHHHHHHhcC--ccceeEecC-CCcccHHHHHHHHHhhcCCcccccCCchh
Q 035631 577 NSMTVLDEMLPIAIEMARRN--CRGAWNFTN-PGVISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
+|++|++++++.++.++ .++.|++++ ++.+|+.|+++.+.+.+|.+..+..++..
T Consensus 190 ---i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 247 (321)
T 3c1o_A 190 ---NYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDE 247 (321)
T ss_dssp ---ECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHH
T ss_pred ---eeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHH
Confidence 99999999999999876 345788876 47999999999999999987766655543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-19 Score=176.19 Aligned_cols=228 Identities=14% Similarity=0.113 Sum_probs=161.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+. ....++.++.+|+.|.+++..++...
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIE--QFPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC--CSTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 346689999999999999999999999 899999999742111 01111 12346889999999999988776432
Q ss_pred ----CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|+|||+||.... ....+++...+++|+.++.++.+++. +.+...++|++||...+...
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 150 (257)
T 3imf_A 79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-------- 150 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC--------
Confidence 79999999996543 22334456788999999999998883 22235799999997765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCCh-HHHHHHHHHcCCceEEecCCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGPNQFPEKL-IPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.+.++....... ...+........ ..
T Consensus 151 ------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~ 215 (257)
T 3imf_A 151 ------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PL 215 (257)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TT
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CC
Confidence 23457999999999988877643 48999999999999875421111 011111111111 11
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
..+...+|+|++++.++... ..++.+++.+|..++
T Consensus 216 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 216 GRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 24678999999999998653 367899999886543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.4e-19 Score=176.21 Aligned_cols=235 Identities=13% Similarity=0.018 Sum_probs=164.2
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
+..+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+... ...+++++.+|+.|.+++.+++...
T Consensus 11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 85 (291)
T 3rd5_A 11 LPSFAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRK--GEAAART-MAGQVEVRELDLQDLSSVRRFADGVS 85 (291)
T ss_dssp CCCCTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHTT-SSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHH-hcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence 33455689999999999999999999999 8999999997422 1111111 1356899999999999999988554
Q ss_pred CCCEEEEcCccCCc--CCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV--DNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 86 ~~d~Vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
++|+|||+||.... ....++.+..+++|+.++.++++++.... .+|+|++||...+........ ...+..+..+..
T Consensus 86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~-~~~~~~~~~~~~ 163 (291)
T 3rd5_A 86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLED-LNWRSRRYSPWL 163 (291)
T ss_dssp CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSC-TTCSSSCCCHHH
T ss_pred CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCccc-ccccccCCCCcc
Confidence 78999999997643 23456677899999999999999998876 679999999888754322111 112223445567
Q ss_pred hhHHHHHHHHHHHHHHHHhc---C--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 164 PYSATKAGAEMLVMAYHRSY---G--LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
.|+.+|.+.+.+.+.++.++ + ++++.++||.|..+... .....+...... . + ..+-....+|+|
T Consensus 164 ~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~--~~~~~~~~~~~~-~--~------~~~~~~~~~~~A 232 (291)
T 3rd5_A 164 AYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQG--ASGRKLGDALMS-A--A------TRVVATDADFGA 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------CHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccc--ccchHHHHHHHH-H--H------HHHHhCCHHHHH
Confidence 89999999999998887664 4 89999999999876431 111111111100 0 0 112234589999
Q ss_pred HHHHHHHhcCC-CCcEEEecCC
Q 035631 239 EAFDVILHRGV-IGHVYNVGTK 259 (684)
Q Consensus 239 ~~i~~~~~~~~-~~~~~ni~~~ 259 (684)
++++.++..+. .++.+++.+|
T Consensus 233 ~~~~~l~~~~~~~G~~~~vdgG 254 (291)
T 3rd5_A 233 RQTLYAASQDLPGDSFVGPRFG 254 (291)
T ss_dssp HHHHHHHHSCCCTTCEEEETTS
T ss_pred HHHHHHHcCCCCCCceeCCccc
Confidence 99999988754 4566776544
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=173.31 Aligned_cols=223 Identities=18% Similarity=0.125 Sum_probs=157.3
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-C
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-G 86 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~ 86 (684)
....+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....+.++.+|+.+.+.+.+++... +
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEE--KLKSLGN-ALKDNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHH-HhccCccEEEcCCCCHHHHHHHHHhcCC
Confidence 3456789999999999999999999999 899999999642 2111111 01246788999999999998888544 7
Q ss_pred CCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||+||.... ....+++...+++|+.++.++++++.. .+ ..+||++||...+...
T Consensus 85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~------------- 150 (249)
T 3f9i_A 85 LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGN------------- 150 (249)
T ss_dssp CSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CC-------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCC-------------
Confidence 9999999997542 234567788999999999999887742 33 5799999998766322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.+...|+.+|++.+.+.+.++.+ .++++.+++||.+.++... .............. ....+.+++
T Consensus 151 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~ 218 (249)
T 3f9i_A 151 -PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD--KLNEKQREAIVQKI---------PLGTYGIPE 218 (249)
T ss_dssp -SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC--------CCHHHHHHHHHHC---------TTCSCBCHH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc--ccCHHHHHHHHhcC---------CCCCCcCHH
Confidence 23457999999999999888766 4799999999999887432 12222222222211 123578899
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
|+|+++..++... ..++.+++.+|..
T Consensus 219 dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 219 DVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 9999999999753 3578999988754
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=177.97 Aligned_cols=227 Identities=14% Similarity=0.104 Sum_probs=164.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.++++|||||+|+||++++++|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+++..++..
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEG--AEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 445689999999999999999999999 8999999996421 111110 01235688999999999998877643
Q ss_pred ---CCCCEEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------- 153 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENT---------- 153 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCC----------
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCC----------
Confidence 2899999999976542 2334556788999999999999874 333 579999999876532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|...+.+.+.++.++ ++++..++||.+.++.... ...+..........+ ...+
T Consensus 154 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~p---------~~r~ 219 (256)
T 3gaf_A 154 ----NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-VLTPEIERAMLKHTP---------LGRL 219 (256)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-HCCHHHHHHHHTTCT---------TSSC
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-ccCHHHHHHHHhcCC---------CCCC
Confidence 2234679999999999999887764 7999999999998763100 001122222222221 1356
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
.+.+|+|++++.++... ..++.+++.+|...++
T Consensus 220 ~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 220 GEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred CCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 78999999999998643 3688999998876654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.9e-19 Score=174.68 Aligned_cols=223 Identities=15% Similarity=0.085 Sum_probs=162.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|+||||||+|+||++++++|+++ |++|++++|+... ...+.. ......+.++.+|+.|.+++..++..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQAS--AEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999997421 111110 01134688999999999988877643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~--------- 148 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGN--------- 148 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC---------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC---------
Confidence 2699999999976432 23345567889999999999988753 33 4799999997765322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+.+.++.+ .++++..++||.+..+... ...+.......... ....+
T Consensus 149 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~---------~~~~~ 212 (247)
T 3lyl_A 149 -----PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD--KLTDEQKSFIATKI---------PSGQI 212 (247)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT--TSCHHHHHHHHTTS---------TTCCC
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccch--hccHHHHHHHhhcC---------CCCCC
Confidence 23457999999999999888765 4899999999999887542 22222222222222 22357
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
.+++|+|+++..++... ..++.+++.+|..+
T Consensus 213 ~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 213 GEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred cCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 89999999999998643 35789999887654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=178.54 Aligned_cols=221 Identities=13% Similarity=0.115 Sum_probs=156.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ...++.++.+|+.|.+++..++..
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHh--cCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 44589999999999999999999999 899999988642111 011111 134688899999999998877642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--------- 187 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN--------- 187 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC---------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC---------
Confidence 3799999999976432 2223456788999999888777765 334 6899999998665321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...|.+.+.++.+. +++++++|||.+.++... ...+.+........+ ...+
T Consensus 188 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~~~ 251 (285)
T 2c07_A 188 -----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD--KISEQIKKNIISNIP---------AGRM 251 (285)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCT---------TSSC
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh--hcCHHHHHHHHhhCC---------CCCC
Confidence 123579999999999998887663 899999999999887432 111223232222211 1247
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
++++|+|++++.++..+ ..++.+++.+|.
T Consensus 252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 252 GTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 89999999999998653 357899998764
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-20 Score=179.71 Aligned_cols=222 Identities=15% Similarity=0.129 Sum_probs=135.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
.+.+++||||||+|+||++++++|+++ |++|++++|+... ...+.. ......+.++.+|+.|.+++..++...
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEA--AEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 8999999996421 111110 011346788999999999988776432
Q ss_pred ----CCCEEEEcCccCC---c----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTH---V----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 86 ----~~d~Vih~a~~~~---~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
++|+|||+||... . ....+++...+++|+.++.++.+++ ++.+ ..+||++||...|.
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------- 153 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL------- 153 (253)
T ss_dssp HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC-------
Confidence 8999999999732 1 1233445678899999966665554 4444 58999999987762
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
+...|+.+|...+.+.+.++.++ ++++..++||.++++..... ....+...+....+
T Consensus 154 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~--------- 213 (253)
T 3qiv_A 154 ----------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT-TPKEMVDDIVKGLP--------- 213 (253)
T ss_dssp ----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc-CcHHHHHHHhccCC---------
Confidence 12459999999999999998875 78999999999998753211 11111222222111
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
...+..++|+|+++..++... ..++.|++.+|..+
T Consensus 214 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 214 LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII 251 (253)
T ss_dssp ------CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence 124456799999999998653 25889999988654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=178.79 Aligned_cols=235 Identities=19% Similarity=0.157 Sum_probs=161.7
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc-----------cccccCCC--CCCCCCceEEEecCCC
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-----------SSLKNLHP--SRASPNFKFLKGDITC 74 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----------~~~~~l~~--~~~~~~~~~~~~Dl~d 74 (684)
..+.+++||||||+|+||+++++.|+++ |++|++++|+... .....+.. ......+.++.+|+.|
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD 88 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 3455689999999999999999999999 8999999984211 11111000 0123467889999999
Q ss_pred HHHHHHhhcc-----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccc
Q 035631 75 ADLMNYLLVS-----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEV 141 (684)
Q Consensus 75 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~v 141 (684)
.+++.+++.. .++|++||+||...... ..+++...+++|+.++.++++++.. .+...++|++||...
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence 9998877643 28999999999765322 3344556889999999999988743 222478999999876
Q ss_pred ccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCc
Q 035631 142 YGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ 218 (684)
Q Consensus 142 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 218 (684)
+... .....|+.+|...+.+.+.++.+ +++++..++||.+.++..........+.........
T Consensus 169 ~~~~--------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 234 (280)
T 3pgx_A 169 LKAT--------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHS 234 (280)
T ss_dssp TSCC--------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGG
T ss_pred ccCC--------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhh
Confidence 5321 22457999999999999988876 589999999999999864211111111100000111
Q ss_pred eEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 219 LPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 219 ~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.... . ....+.+++|+|++++.++... ..++.+++.+|.
T Consensus 235 ~~~~~-~-~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 235 FPPMP-V-QPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp SCCBT-T-BCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhcc-c-CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 11111 1 1114789999999999998643 357899998764
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=171.63 Aligned_cols=213 Identities=17% Similarity=0.173 Sum_probs=156.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+... ..++.++.+|+.|.+++..++..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999996421 24688999999999988877642
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++... ....++|++||...+...
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 140 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT------------ 140 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC------------
Confidence 27999999999754321 23356678899999998888887542 125899999998776321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChH-------H----HHHHHHHcCCceEEecC
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYG--LPTITTRGNNVYGPNQFPEKLI-------P----KFILLAMKGQQLPIHGN 224 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~ 224 (684)
.+...|+.+|...+.+.+.++.+++ +++++++||.+.++... ... . ..........
T Consensus 141 --~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------- 209 (264)
T 2dtx_A 141 --KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR--KAAELEVGSDPMRIEKKISEWGHEH------- 209 (264)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH--HHHHHHHCSCHHHHHHHHHHHHHHS-------
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh--hhhhcccccCchhhHHHHHHHHhcC-------
Confidence 2345799999999999998887754 88999999999765210 000 0 1111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+++++|+|++++.++... ..++.+++.+|.
T Consensus 210 --p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 210 --PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 1125789999999999998653 357889998764
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=174.37 Aligned_cols=223 Identities=13% Similarity=0.073 Sum_probs=160.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
.+++||||||+|+||+++++.|+++ |++|++. +|+.. ....+.. .....++.++.+|+.|.+++.+++...
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKK--AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE 78 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8999987 77532 1111100 012346889999999999988776432
Q ss_pred ---CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~---------- 147 (258)
T 3oid_A 79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRY---------- 147 (258)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSB----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCC----------
Confidence 789999999965432 2223455678999999999998884 333 579999999776532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|...+.+.+.++.++ ++++..++||.+..+..........+........+ ...+
T Consensus 148 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~ 214 (258)
T 3oid_A 148 ----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP---------AGRM 214 (258)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT---------TSSC
T ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC---------CCCC
Confidence 2234679999999999999988774 79999999999988743211111222333222221 1246
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+.+|+|++++.++... ..++.+++.+|..
T Consensus 215 ~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp BCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence 78999999999999753 3578999988754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=173.23 Aligned_cols=223 Identities=17% Similarity=0.148 Sum_probs=158.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+... ...+... ...++.++.+|+.|.+++.+++...
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSG--GEAQAKK-LGNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSS--HHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHh--HHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 45689999999999999999999999 8999999997521 1111000 0246889999999999988877422
Q ss_pred -CCCEEEEcCccCCcC----------CCCCChHHHHHHHHHHHHHHHHHHHhc----------CCCcEEEEEeCcccccC
Q 035631 86 -GIDTIMHFAAQTHVD----------NSFGNSFEFTNNNIYGTHVLLEACKLT----------GQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~~~i~~SS~~vyg~ 144 (684)
++|+|||+||..... ...+++...+++|+.++.++++++... + ..+||++||...+..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~ 163 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEG 163 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCC
Confidence 899999999976432 223345678899999999999988754 3 579999999877642
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEE
Q 035631 145 TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 145 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 221 (684)
. .+...|+.+|...+.+.+.++.+ .++++++++||++.++... ..............+.
T Consensus 164 ~--------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~-- 225 (265)
T 2o23_A 164 Q--------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT--SLPEKVCNFLASQVPF-- 225 (265)
T ss_dssp C--------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSS--
T ss_pred C--------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccc--ccCHHHHHHHHHcCCC--
Confidence 2 23457999999999999888766 4899999999999887431 1111111111111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCCcc
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKER 262 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~ 262 (684)
...+++.+|+|++++.++..+ ..++.+++.+|..+
T Consensus 226 ------~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 226 ------PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp ------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred ------cCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 024678999999999998764 36788999877543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-19 Score=171.48 Aligned_cols=221 Identities=17% Similarity=0.106 Sum_probs=158.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 88 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+.. ....+.. ..++.++.+|+.|.+++.+++.. .++|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINES--KLQELEK---YPGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHGGGGG---STTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHh---ccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45689999999999999999999999 899999999742 2222221 12688899999999998876543 3799
Q ss_pred EEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+.... .
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------~ 142 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV-------------V 142 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-------------T
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC-------------C
Confidence 999999976432 12234556789999999999988753 34 58999999977653211 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
+...|+.+|...|.+.+.++.+. +++++++||++++++.... ...............+ ...+..
T Consensus 143 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 213 (246)
T 2ag5_A 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFAT 213 (246)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEE
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCC
Confidence 34579999999999998887664 8999999999999873210 0000111222221111 114678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+|+|++++.++... ..++.+++.+|.
T Consensus 214 ~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 214 AEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 999999999998643 357889988764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-19 Score=176.13 Aligned_cols=227 Identities=14% Similarity=0.074 Sum_probs=161.7
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+ |+||+++++.|+++ |++|++++|+.... ....+... .....++.+|+.|.+++..++..
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHh--cCCcEEEEccCCCHHHHHHHHHHHH
Confidence 345789999999 99999999999999 89999999964110 11111100 12347889999999988777642
Q ss_pred ---CCCCEEEEcCccCCc--------C-CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------D-NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||.... . ...+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------- 155 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA------- 155 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-------
Confidence 279999999997542 1 2334566789999999999999997642 0259999999776532
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...+.+.+.++.+. ++++++++||+++++........+.+........++
T Consensus 156 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 219 (265)
T 1qsg_A 156 -------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------- 219 (265)
T ss_dssp -------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------
Confidence 1234579999999999999887764 799999999999988532111223333333222211
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
..+.+++|+|++++.++... ..++.|++.+|...+
T Consensus 220 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 220 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 13578999999999998643 257899999876543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=172.43 Aligned_cols=228 Identities=16% Similarity=0.102 Sum_probs=157.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+........+.. ...++.++.+|+.|.+++..++.. .
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIAR--HGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHT--TSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHh--cCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 899999999753111111211 124678889999999998887742 2
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------------ 145 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGS------------ 145 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCC------------
Confidence 899999999975432 123345678899999776666554 5555 6899999998776421
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCc---eEEe-cCCCceEe
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ---LPIH-GNGSNVRS 230 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~ 230 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.++++... ...... ... .... ...+ ........
T Consensus 146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~-~~~-~~~~~~~~~~~~~~~~p~~~ 219 (255)
T 2q2v_A 146 --TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ--KQIDDR-AAN-GGDPLQAQHDLLAEKQPSLA 219 (255)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH--HHHHHH-HHH-TCCHHHHHHHHHTTTCTTCC
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh--hhcccc-ccc-ccchHHHHHHHHhccCCCCC
Confidence 123579999999999999888774 789999999999886321 111000 000 0000 0000 11112235
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+++++|+|++++.++..+ ..++.|++.+|..
T Consensus 220 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 220 FVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 789999999999998653 3578999987743
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.3e-20 Score=183.90 Aligned_cols=251 Identities=12% Similarity=0.047 Sum_probs=168.4
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc----------cCC--CCCCCCCceEEEecCCC
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK----------NLH--PSRASPNFKFLKGDITC 74 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----------~l~--~~~~~~~~~~~~~Dl~d 74 (684)
|..+.+++||||||+|+||+++++.|+++ |++|++++|+....... ... ......++.++.+|+.|
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD 82 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence 44556789999999999999999999999 89999999863211100 000 00123468899999999
Q ss_pred HHHHHHhhcc-----CCCCEEEEcCccCCcC--CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCC
Q 035631 75 ADLMNYLLVS-----EGIDTIMHFAAQTHVD--NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 75 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~ 146 (684)
.+++.+++.. .++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 162 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA 162 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence 9998877643 2899999999986543 3345567889999999999999997642 246999999987764332
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCc----e
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ----L 219 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~----~ 219 (684)
..+ ..+..+..+...|+.+|...+.+.+.++.++ ++++..++||+|.++..........+......... .
T Consensus 163 ~~~---~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T 3pxx_A 163 QPP---GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL 239 (287)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred ccc---cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHh
Confidence 211 1222222344679999999999999888775 89999999999998754211000000000000000 0
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
...........+.+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 240 ~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~ 285 (287)
T 3pxx_A 240 AFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285 (287)
T ss_dssp HGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence 00000111146789999999999998643 46889999988654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=179.29 Aligned_cols=222 Identities=18% Similarity=0.181 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ...++.++.+|+.|.+++..++..
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELRE--AGVEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 445689999999999999999999999 899999999742111 011110 124678899999999988777642
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc------CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT------GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... + ..+||++||...+..
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~------- 166 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG------- 166 (277)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSC-------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccC-------
Confidence 2799999999975432 122345678899999999999987654 3 589999999766421
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCC
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGQ 217 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~ 217 (684)
..+...|+.+|...+.+.+.++.+. ++++++++||++.++... ... ...........
T Consensus 167 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T 2rhc_B 167 -------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA--SVREHYSDIWEVSTEEAFDRITARV 237 (277)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH--HHHHHHHHHHTCCHHHHHHHHHHHS
T ss_pred -------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh--hhhhhcccccccchHHHHHHHHhcC
Confidence 1234579999999999998887663 789999999999876320 111 01111111111
Q ss_pred ceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 218 QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 218 ~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+++.+|+|++++.++..+ ..++.+++.+|.
T Consensus 238 ---------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 238 ---------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp ---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 1135789999999999998653 367899998764
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=175.47 Aligned_cols=218 Identities=15% Similarity=0.134 Sum_probs=156.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcE-EEEEcCCCcccccccCCCCCCCCCceEEEecCCCH-HHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYE-IVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA-DLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~--- 84 (684)
+.+++|+||||+|+||++++++|+++ |++ |++++|+........+.......++.++.+|+.|. +++..++..
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 45689999999999999999999999 785 99999875322222221111124678899999997 777666532
Q ss_pred --CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC------CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG------QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~------~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||... .++....+++|+.++.++++++...- ...++|++||...+...
T Consensus 81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 145 (254)
T 1sby_A 81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------- 145 (254)
T ss_dssp HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------
T ss_pred hcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------
Confidence 27999999999753 46788999999999999999886421 13689999998876421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-CChH--HHHHHHHHcCCceEEecCCCceEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP-EKLI--PKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...|.+.+.++.+ .++++++++||.+.++.... .... .......... ..
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------------~~ 210 (254)
T 1sby_A 146 ---HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS------------HP 210 (254)
T ss_dssp ---TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT------------SC
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc------------CC
Confidence 22457999999999999888765 58999999999998863110 0000 0000111111 12
Q ss_pred cccHHHHHHHHHHHHhcCCCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRGVIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~~~~~~ni~~~ 259 (684)
+.+++|+|++++.++.....++.|++.+|
T Consensus 211 ~~~~~dvA~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 211 TQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp CEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred CCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence 34789999999999987777889999877
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-20 Score=174.43 Aligned_cols=180 Identities=9% Similarity=0.005 Sum_probs=131.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|+|+||||+|+||++++++|+++|++| .++.+|++|.+++.++++++ |+|||+|+...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~a~~~~-- 79 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTRN-- 79 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCTT--
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCC--CEEEECccCCC--
Confidence 799999999999999999999999876 45678999999999999876 99999999651
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
. .+ ..++|+.++.+++++|.+.++ ++|++||..+|+.....+ . +.+.|+.+|..+|.
T Consensus 80 -~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------------~-~~~~y~~~K~~~e~ 137 (206)
T 1hdo_A 80 -D----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------------P-RLQAVTDDHIRMHK 137 (206)
T ss_dssp -C----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------------G-GGHHHHHHHHHHHH
T ss_pred -C----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------------c-cchhHHHHHHHHHH
Confidence 1 11 235899999999999999887 699999999987433211 1 55789999999987
Q ss_pred hhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCC-chHHHHhhhcccccccCCCccchhhHHHHHHH
Q 035631 513 LSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNP-RNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591 (684)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 591 (684)
+.. ..+.++.+.|+..++ ++... . ...... ++ .+ ++| +|++|+|++++.
T Consensus 138 ~~~--~~~i~~~~lrp~~~~-~~~~~---~----~~~~~~-~~--~~~~~~-----------------i~~~Dva~~~~~ 187 (206)
T 1hdo_A 138 VLR--ESGLKYVAVMPPHIG-DQPLT---G----AYTVTL-DG--RGPSRV-----------------ISKHDLGHFMLR 187 (206)
T ss_dssp HHH--HTCSEEEEECCSEEE-CCCCC---S----CCEEES-SS--CSSCSE-----------------EEHHHHHHHHHH
T ss_pred HHH--hCCCCEEEEeCCccc-CCCCC---c----ceEecc-cC--CCCCCc-----------------cCHHHHHHHHHH
Confidence 753 234555566665431 11000 0 000000 00 01 244 999999999999
Q ss_pred HHhcC--ccceeEecCCC
Q 035631 592 MARRN--CRGAWNFTNPG 607 (684)
Q Consensus 592 ~~~~~--~~g~~ni~~~~ 607 (684)
+++++ .+++||++++.
T Consensus 188 ~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 188 CLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp TTSCSTTTTCEEEEECCC
T ss_pred HhcCccccccceeeeccc
Confidence 99876 35599998874
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=176.55 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC-CCcccccccCCCC---CCCCCceEEEecCCCH----HHHHH
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK-LDYCSSLKNLHPS---RASPNFKFLKGDITCA----DLMNY 80 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~----~~~~~ 80 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++| +.. ....+... ....++.++.+|+.|. +.+..
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED 83 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChH--HHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHH
Confidence 345689999999999999999999999 899999999 531 11111000 0024688899999999 88777
Q ss_pred hhcc-----CCCCEEEEcCccCCcCCC----C-----------CChHHHHHHHHHHHHHHHHHHHhcC--CC------cE
Q 035631 81 LLVS-----EGIDTIMHFAAQTHVDNS----F-----------GNSFEFTNNNIYGTHVLLEACKLTG--QV------KR 132 (684)
Q Consensus 81 ~~~~-----~~~d~Vih~a~~~~~~~~----~-----------~~~~~~~~~n~~~~~~ll~~~~~~~--~~------~~ 132 (684)
++.. .++|+|||+||....... . ++....+++|+.++.++++++...- .. .+
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~ 163 (276)
T 1mxh_A 84 IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS 163 (276)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEE
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcE
Confidence 6632 279999999997543211 1 3345688999999999999998631 13 79
Q ss_pred EEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHH
Q 035631 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKF 209 (684)
Q Consensus 133 ~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~ 209 (684)
||++||...+.. ..+...|+.+|...+.+.+.++.+. ++++++++||.++++ . .+.+..
T Consensus 164 iv~isS~~~~~~--------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~---~~~~~~ 225 (276)
T 1mxh_A 164 VVNLCDAMTDLP--------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P---AMPQET 225 (276)
T ss_dssp EEEECCGGGGSC--------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S---SSCHHH
T ss_pred EEEECchhhcCC--------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c---cCCHHH
Confidence 999999877632 1234579999999999998887664 899999999999998 2 122233
Q ss_pred HHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 210 ILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
........+. .+++.+.+|+|++++.++... ..++.+++.+|..
T Consensus 226 ~~~~~~~~p~--------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 226 QEEYRRKVPL--------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp HHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 3333322211 123789999999999998643 3578999987743
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=175.05 Aligned_cols=224 Identities=14% Similarity=0.052 Sum_probs=159.9
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+ |+||+++++.|+++ |++|++++|+.... ....+... ...+.++.+|+.|.+++..++..
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKG--FGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999999 99999999999999 89999999975210 11111110 12367899999999988877642
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||.... ....++....+++|+.++.++++++...- ...+||++||...+...
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------ 168 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV------ 168 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC------
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC------
Confidence 279999999997642 22334456788999999999999997642 13799999997665321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.++++........+.+........++
T Consensus 169 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 231 (285)
T 2p91_A 169 --------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF--------- 231 (285)
T ss_dssp --------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------
Confidence 234579999999999998887663 899999999999998542211223333333222211
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+.+++|+|++++.++... ..++.|++.++.
T Consensus 232 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 232 GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 13578999999999998642 357889998774
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.6e-19 Score=174.73 Aligned_cols=222 Identities=14% Similarity=0.116 Sum_probs=156.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+..... ...+. ...++.++.+|+.|.+.+..++..
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVG---TPDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC---CTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhh---ccCceEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 01111 114688999999999988877643
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCC-cEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQV-KRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~-~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||...... ..+++...+++|+.++.++.+++ ++.+ . ++||++||...+...
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~-------- 149 (251)
T 1zk4_A 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGD-------- 149 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCC--------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCC--------
Confidence 26999999999754321 22334568899999777666554 4444 5 799999998776432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHH-----hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHR-----SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...|.+.+.++. ..+++++++||++++++.... ........ .... ....
T Consensus 150 ------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~~~~-~~~~-------~~~~ 213 (251)
T 1zk4_A 150 ------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD--LPGAEEAM-SQRT-------KTPM 213 (251)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT--STTHHHHH-TSTT-------TCTT
T ss_pred ------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh--cCchhhhH-HHhh-------cCCC
Confidence 2345799999999999987765 457899999999999873211 10011100 0011 1111
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+++.+|+|+++..++... ..++.+++.+|..
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 35789999999999999653 3578999988753
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-19 Score=175.82 Aligned_cols=220 Identities=14% Similarity=0.098 Sum_probs=156.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+|+||||||+|+||++++++|+++ |++|+++ +|+.. ....+... ....++.++.+|+.|.+++..++..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAK--AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999 8999995 77532 11111000 0123578899999999998887742
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....+||++||...+...
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 145 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------- 145 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------
Confidence 2799999999976432 222345678899999999999888652 126899999997654221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.+ .+++++++||++++++... .....+........+ ...+++
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~~~~~ 211 (244)
T 1edo_A 146 ---IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA--KLGEDMEKKILGTIP---------LGRTGQ 211 (244)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH--TTCHHHHHHHHTSCT---------TCSCBC
T ss_pred ---CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh--hcChHHHHHHhhcCC---------CCCCCC
Confidence 12457999999999998888766 4899999999999986321 111222222222211 124789
Q ss_pred HHHHHHHHHHHHhcC----CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG----VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~----~~~~~~ni~~~~ 260 (684)
.+|+|+++..++..+ ..++.|++.+|.
T Consensus 212 ~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 212 PENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 999999999998432 357899998764
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=173.40 Aligned_cols=224 Identities=11% Similarity=0.034 Sum_probs=157.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++..
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEK--ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 899999999742 1111100 00134688899999999988877642
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------- 165 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL-------- 165 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC--------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCC--------
Confidence 4799999999975432 1223455678899999999999884 334 5899999998876432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCceEEecCCC
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKL----IPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 226 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.++++......- ............+
T Consensus 166 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-------- 231 (273)
T 1ae1_A 166 ------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-------- 231 (273)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST--------
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC--------
Confidence 234579999999999998887664 8999999999999875311000 0111112211111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+.+.+|+|+++..++... ..++.+++.+|..
T Consensus 232 -~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 232 -MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 124678999999999988642 3578999987743
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=172.25 Aligned_cols=216 Identities=16% Similarity=0.141 Sum_probs=156.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+... ....+.++.+|+.|.+++.+++..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEE--GKAMAAE-LADAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHH-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHH-hhcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 8999999997421 1111000 012478899999999998877742
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 147 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT----------- 147 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCC-----------
Confidence 2799999999976432 223345678899999996555544 4444 6899999998776421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...|.+.+.++.+ ++++++++|||.++++... + ....+. ......+.+
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~---------~~~~~~----~~~~~~~~~ 208 (260)
T 1nff_A 148 ---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---W---------VPEDIF----QTALGRAAE 208 (260)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---T---------SCTTCS----CCSSSSCBC
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc---c---------chhhHH----hCccCCCCC
Confidence 12357999999999999888766 5899999999999987431 0 000010 011135688
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+|+|+++..++... ..++.|++.+|..
T Consensus 209 ~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~ 239 (260)
T 1nff_A 209 PVEVSNLVVYLASDESSYSTGAEFVVDGGTV 239 (260)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence 999999999998653 3578999988754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=171.85 Aligned_cols=217 Identities=17% Similarity=0.089 Sum_probs=157.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... + .....+.+|+.|.+.+..++..
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~-----~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 92 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAG-----I------AADLHLPGDLREAAYADGLPGAVAAGL 92 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTT-----S------CCSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH-----H------HhhhccCcCCCCHHHHHHHHHHHHHhc
Confidence 44689999999999999999999999 8999999996421 0 1123457899999887766532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+..
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~------------ 159 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRP------------ 159 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC------------
Confidence 3799999999986532 233445677899999999999998 4444 589999999776532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC-----CCChHHHHHHHHHcCCceEEecCCCce
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF-----PEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...+.+.+.++.++ ++++.+++||.+.++... ................ ..
T Consensus 160 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~ 228 (266)
T 3uxy_A 160 --GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PL 228 (266)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TT
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CC
Confidence 2234579999999999998887764 899999999999876310 0001111112222221 22
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
..+.+++|+|++++.++... ..++.+++.+|..++
T Consensus 229 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 229 GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 35688999999999999753 357899999886543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-19 Score=180.21 Aligned_cols=209 Identities=20% Similarity=0.227 Sum_probs=150.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe----------------------------eeeccCCChhHHHHHHHhcCCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE----------------------------FGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~----------------------------~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
||+|||||||||||++++++|+++|++|. ++.+|++|.+++.++++++ |+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQV--DI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCC--CE
Confidence 46899999999999999999999998762 3457888999999999987 99
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-Ce-EEEEecceeeecCCCCCCCCCCCCccCCCCCCC-
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT- 499 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p- 499 (684)
|||+|+.. . +.++.+++++|++.+ ++ +| .| +||.. .+|.++.. |
T Consensus 80 vi~~a~~~---~---------------~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~----------~~~~~~~~-p~ 126 (307)
T 2gas_A 80 VICAAGRL---L---------------IEDQVKIIKAIKEAGNVKKFF-PS---EFGLD----------VDRHDAVE-PV 126 (307)
T ss_dssp EEECSSSS---C---------------GGGHHHHHHHHHHHCCCSEEE-CS---CCSSC----------TTSCCCCT-TH
T ss_pred EEECCccc---c---------------cccHHHHHHHHHhcCCceEEe-ec---ccccC----------cccccCCC-cc
Confidence 99999843 1 457889999999998 75 55 32 45522 12223333 4
Q ss_pred CChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhh---hccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 500 RSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENV---CTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.+.| .+|..+|.+.. ..+.++.+.|+..+++... +.+... ......+.+++++...++|
T Consensus 127 ~~~y-~sK~~~e~~~~--~~~i~~~~lrp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 188 (307)
T 2gas_A 127 RQVF-EEKASIRRVIE--AEGVPYTYLCCHAFTGYFL-RNLAQLDATDPPRDKVVILGDGNVKGAY-------------- 188 (307)
T ss_dssp HHHH-HHHHHHHHHHH--HHTCCBEEEECCEETTTTG-GGTTCTTCSSCCSSEEEEETTSCSEEEE--------------
T ss_pred hhHH-HHHHHHHHHHH--HcCCCeEEEEcceeecccc-ccccccccccCCCCeEEEecCCCcceEE--------------
Confidence 4678 99999987653 2456666667765554321 111111 0111234556777777788
Q ss_pred CCccchhhHHHHHHHHHhcC--ccceeEecCC-CcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 577 NSMTVLDEMLPIAIEMARRN--CRGAWNFTNP-GVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
+|++|++++++.+++++ .++.|++.++ +.+|+.|+++.+.+.+|.+.....++..+
T Consensus 189 ---i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (307)
T 2gas_A 189 ---VTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQ 247 (307)
T ss_dssp ---ECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred ---eeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 99999999999999876 3457887764 68999999999999999877766665443
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=173.56 Aligned_cols=229 Identities=18% Similarity=0.139 Sum_probs=164.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+++..++..
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNA--LAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHH--HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 8999999997421 111110 11235688899999999998877642
Q ss_pred ---CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ..+.+++...+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-------- 151 (280)
T 3tox_A 81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTA-------- 151 (280)
T ss_dssp HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTB--------
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcC--------
Confidence 279999999996532 223345667899999999999988753 23 479999999776521
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
+..+...|+.+|...+.+.+.++.++ ++++..++||.+.++.... ....+..........+
T Consensus 152 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p--------- 217 (280)
T 3tox_A 152 -----GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA--------- 217 (280)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------
Confidence 12234579999999999998887764 8999999999999875321 0011222222222221
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
...+...+|+|++++.++... ..|+.+++.+|..++.
T Consensus 218 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 218 LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 124678999999999999753 3678999998865543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.79 E-value=6e-18 Score=166.12 Aligned_cols=215 Identities=15% Similarity=0.107 Sum_probs=154.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
..+++++||||||+|+||+++++.|+++ |++|++++|+.. . .+.+.++.+|+.|.+++..++..
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~---------~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGE--P---------PEGFLAVKCDITDTEQVEQAYKEIEE 83 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSC--C---------CTTSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChH--h---------hccceEEEecCCCHHHHHHHHHHHHH
Confidence 3445689999999999999999999999 899999999641 1 12378899999999988777643
Q ss_pred --CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~--------- 153 (253)
T 2nm0_A 84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS--------- 153 (253)
T ss_dssp HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC---------
Confidence 368999999997542 234567888999999999999987753 24 5899999997654211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.+..+... .+............+ ...+
T Consensus 154 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~p---------~~~~ 217 (253)
T 2nm0_A 154 -----AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK--VLTDEQRANIVSQVP---------LGRY 217 (253)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCT---------TCSC
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh--hcCHHHHHHHHhcCC---------CCCC
Confidence 123479999999999998887763 789999999998766321 111111111111111 1246
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+..+|+|++++.++..+ ..++.+.+.+|..
T Consensus 218 ~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 218 ARPEEIAATVRFLASDDASYITGAVIPVDGGLG 250 (253)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred cCHHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence 88999999999998653 3578899987754
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-19 Score=176.66 Aligned_cols=223 Identities=13% Similarity=0.044 Sum_probs=158.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.... ..+... ....++.++.+|+.|.+.+.+++..
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPAD--EKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCH--HHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 89999999975311 111000 0124678899999999988877643
Q ss_pred --CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHH----HHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYG----THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....++....+++|+.+ ++++++.+++.+ .++||++||...+...
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------- 179 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN------- 179 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC--------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC-------
Confidence 259999999997643 22223345688999999 567777777765 6899999997764220
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+..+...|+.+|...|.+++.++.++ + ++.+++|+.+.++.... .............+ ..
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~p---------~~ 242 (279)
T 3ctm_A 180 -----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF--ASKDMKAKWWQLTP---------LG 242 (279)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS--CCHHHHHHHHHHST---------TC
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc--cChHHHHHHHHhCC---------cc
Confidence 12334679999999999999988774 5 89999999998874321 11222222211111 12
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+++.+|+|+++..++... ..++.+++.+|..
T Consensus 243 ~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 243 REGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp SCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 4688999999999998753 4678999987753
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-19 Score=175.34 Aligned_cols=225 Identities=14% Similarity=0.100 Sum_probs=160.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc-ccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL-KNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|....... ..+. .....+.++.+|+.|.+++..+...
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIA--DGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHH--TTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 8999999975421111 1111 1234688999999999887766421
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~------------ 171 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQG------------ 171 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------------
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCC------------
Confidence 38999999999765322 334456788999999999998873 334 589999999877632
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|.++...................+ ...+..
T Consensus 172 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ 240 (273)
T 3uf0_A 172 --GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP---------AGRWAT 240 (273)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST---------TSSCBC
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC---------CCCCCC
Confidence 223457999999999999988877 589999999999998743100000111222222111 124577
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
.+|+|++++.++... ..|+.+++.+|...
T Consensus 241 pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 899999999998653 36889999987654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=175.43 Aligned_cols=221 Identities=15% Similarity=0.138 Sum_probs=151.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
+++||||||+|+||++++++|+++ |++|+++ .|+.. ....+.. .....++.++.+|+.|.+++..++...
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANRE--AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999 8999887 55421 1111100 011346889999999999988776432
Q ss_pred --CCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhc------CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLT------GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++|+|||+||..... .+.+++...+++|+.++.++++++... +...+||++||...+....
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 175 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA------ 175 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT------
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC------
Confidence 799999999976431 133455678899999999999887643 1247899999977653211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|...+.+.+.++.+. +++++.++||.|.++.... ...+.......... ...
T Consensus 176 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~ 238 (272)
T 4e3z_A 176 -------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS-GGLPDRAREMAPSV---------PMQ 238 (272)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CC---------TTS
T ss_pred -------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc-cCChHHHHHHhhcC---------CcC
Confidence 123469999999999998887765 8999999999999874321 11111111111111 122
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+.+++|+|++++.++... ..++.|++.+|
T Consensus 239 ~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 239 RAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 4567999999999998643 35789999876
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=169.99 Aligned_cols=221 Identities=16% Similarity=0.104 Sum_probs=155.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+.. ....+.... ..++.++.+|+.|.+++..+++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDE--EGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999742 111111111 23578899999999988877642
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHH----HHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVL----LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++..+ +..+++.+ ..+||++||...+...
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 145 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL----------- 145 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-----------
Confidence 2799999999975431 22344567889999998754 44455555 6899999998775321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc-
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL- 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i- 232 (684)
.+...|+.+|...+.+.+.++.+ .+++++++|||+++++.. .. .. ...............+.
T Consensus 146 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~----~~-~~~~~~~~~~~p~~~~~~ 211 (254)
T 1hdc_A 146 ---ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT------AE----TG-IRQGEGNYPNTPMGRVGN 211 (254)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HH----HT-CCCSTTSCTTSTTSSCB-
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc------cc----cc-hhHHHHHHhcCCCCCCCC
Confidence 23457999999999999888766 379999999999987621 11 10 00000000000112357
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 8999999999998653 3578899987753
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=170.15 Aligned_cols=210 Identities=16% Similarity=0.087 Sum_probs=150.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+. ...+.++.+|+.|.+++..++..
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVE--RLKALN----LPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHH--HHHTTC----CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHhh----cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 45688999999999999999999999 899999999642 222221 23688999999999988877642
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~------------ 152 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT------------ 152 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC------------
Confidence 27999999999764322 223445678999999999777764 444 589999999877532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|.++......- .......... ..+ ...+++
T Consensus 153 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~-~~~-------~~r~~~ 221 (266)
T 3p19_A 153 --FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAW-RVD-------MGGVLA 221 (266)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHH-HHH-------TTCCBC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-hhhhHHHHhh-ccc-------ccCCCC
Confidence 123457999999999999888776 48999999999998874311110 1111111100 001 124688
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 035631 234 CADVAEAFDVILHRGVIG 251 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~~~ 251 (684)
.+|+|++++.++.++...
T Consensus 222 pedvA~av~~l~~~~~~~ 239 (266)
T 3p19_A 222 ADDVARAVLFAYQQPQNV 239 (266)
T ss_dssp HHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 999999999999876643
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=172.87 Aligned_cols=227 Identities=14% Similarity=0.113 Sum_probs=157.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.......++.++.+|+.|.+++..++..
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 00110000134688899999999988877642
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 159 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI-------- 159 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC--------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCC--------
Confidence 279999999997543 1222345678899998887665554 4444 6899999998765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC------CCChHHHHHHHHHcCCceEEecC
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF------PEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.++++... ................
T Consensus 160 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------- 226 (267)
T 1iy8_A 160 ------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN------- 226 (267)
T ss_dssp ------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC-------
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC-------
Confidence 23457999999999999888765 4899999999999876310 0011111111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
....+.+.+|+|++++.++..+ ..++.+++.+|...
T Consensus 227 --p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 265 (267)
T 1iy8_A 227 --PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA 265 (267)
T ss_dssp --TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred --CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 1124678999999999998653 36789999887544
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=170.14 Aligned_cols=224 Identities=15% Similarity=0.098 Sum_probs=157.2
Q ss_pred CCCCEEEEEcCCch-hHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 10 YKPKKILITGAAGF-IGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~-iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
+.+++||||||+|+ ||++++++|+++ |++|++++|+..... ...+. .....++.++.+|+.|.+++..++...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLA-DLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-TTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHH-hcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 45689999999985 999999999999 899999999742111 11111 112357899999999999988776432
Q ss_pred ----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|+|||+||...... ..++....+++|+.++.++++++... +...++|++||...+..
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 167 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA--------- 167 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC---------
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC---------
Confidence 7999999999754322 23345678899999999999888653 23578999999776522
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
..+...|+.+|...+.+.+.++.+ .++++..++||.+..+..... ......... ........
T Consensus 168 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~---------~~~~~~~r 232 (266)
T 3o38_A 168 -----QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT-SSSELLDRL---------ASDEAFGR 232 (266)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------------CCTTSS
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc-CcHHHHHHH---------HhcCCcCC
Confidence 224467999999999999888776 589999999999987643110 001111111 11122245
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 233 ~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 233 AAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred CCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 688999999999998653 367899998764
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=164.83 Aligned_cols=208 Identities=11% Similarity=-0.008 Sum_probs=155.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 88 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+.. +|+.|.+++.++++. .++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g~id 61 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG--------------------LDISDEKSVYHYFETIGAFD 61 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT--------------------CCTTCHHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc--------------------cCCCCHHHHHHHHHHhCCCC
Confidence 45678999999999999999999999 899999998531 899999998888754 3799
Q ss_pred EEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT 162 (684)
Q Consensus 89 ~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 162 (684)
++||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+.. ..+.
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------~~~~ 127 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV--------------VANT 127 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC--------------CTTC
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC--------------CCCc
Confidence 99999997621 22334456678999999999999997642 1258999999876542 2234
Q ss_pred ChhHHHHHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCCCCC--hHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 163 NPYSATKAGAEMLVMAYHRSYG-LPTITTRGNNVYGPNQFPEK--LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 163 ~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
..|+.+|...+.+.+.++.++. +++..++||.+.++...... ....+........+ ...+.+++|+|+
T Consensus 128 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~ 198 (223)
T 3uce_A 128 YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASDIAM 198 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHHHHH
Confidence 5799999999999999988865 89999999999987432111 11122222222221 125678999999
Q ss_pred HHHHHHhcCC-CCcEEEecCCCcc
Q 035631 240 AFDVILHRGV-IGHVYNVGTKKER 262 (684)
Q Consensus 240 ~i~~~~~~~~-~~~~~ni~~~~~~ 262 (684)
+++.++.... .++.+++.+|..+
T Consensus 199 ~~~~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 199 AYLFAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHccCCCCCCcEEEecCCeec
Confidence 9999997643 6789999887654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=170.55 Aligned_cols=228 Identities=15% Similarity=0.103 Sum_probs=165.0
Q ss_pred CCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 7 PASYKPKKILITGAAGF--IGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~--iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
|..+.+++||||||+|+ ||+++++.|+++ |++|++++|+........+... ...+.++.+|+.|.+++..++..
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAE--FNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGG--GCCSEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHh--cCCceEEEeecCCHHHHHHHHHH
Confidence 44455689999999987 999999999999 8999999997521222222111 23588999999999998877643
Q ss_pred -----CCCCEEEEcCccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~ 148 (684)
.++|+|||+||..... ...++....+++|+.++.++++++... ....++|++||...+..
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---- 172 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA---- 172 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC----
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC----
Confidence 2789999999976531 333455668899999999999988653 11479999999876532
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
..+...|+.+|.+.+.+.+.++.+ .++++..++||.|..+...................+.
T Consensus 173 ----------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------ 236 (280)
T 3nrc_A 173 ----------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------ 236 (280)
T ss_dssp ----------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------
T ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------
Confidence 223457999999999999888766 4899999999999987432222223333333322211
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+...+|+|++++.++... ..++++++.+|..
T Consensus 237 ---~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 237 ---KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp ---CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred ---CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence 23577899999999998643 4678999988754
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.7e-18 Score=166.71 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=159.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
...+++||||||+|+||+++++.|+++ |++|++++|+... .......+++|+.|.+++..++...
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKS----------DVNVSDHFKIDVTNEEEVKEAVEKTTKK 78 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC------------CTTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchh----------ccCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 446789999999999999999999999 8999999996421 1235778899999999988776432
Q ss_pred --CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ ..++|++||...|...
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 147 (269)
T 3vtz_A 79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAAT---------- 147 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC----------
Confidence 8999999999764322 2233456788999999999888653 33 5799999998876432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCceEEecC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQF---------PEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.|.++... ................
T Consensus 148 ----~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 216 (269)
T 3vtz_A 148 ----KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH------- 216 (269)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS-------
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC-------
Confidence 224579999999999999988776 788999999999875310 0011122222222211
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
....+.+.+|+|++++.++... ..|+.+++.+|..
T Consensus 217 --p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 217 --PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 1135678999999999998653 3678999998753
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=169.89 Aligned_cols=221 Identities=10% Similarity=0.067 Sum_probs=156.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ..++.++.+|+.|.+++..++..
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSA---YGDCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTT---SSCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh---cCceEEEEeeCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999 899999999742111 111111 12678889999999988777642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCC---CcEEEEEeCcccccCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQ---VKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~---~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+. ..+||++||...+....
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~----- 176 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG----- 176 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-----
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-----
Confidence 2799999999975432 2334456788999999988877764 3331 27999999987764321
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc--CCceEEecCC
Q 035631 152 GNPEASQLLPTN-PYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK--GQQLPIHGNG 225 (684)
Q Consensus 152 ~~~e~~~~~p~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 225 (684)
... .|+.+|...+.+.+.++.+ .++++++++||.+..+... ............ ..+
T Consensus 177 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p------- 238 (276)
T 2b4q_A 177 ---------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR--HIANDPQALEADSASIP------- 238 (276)
T ss_dssp ---------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH--HHHHCHHHHHHHHHTST-------
T ss_pred ---------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh--hcchhHHHHHHhhcCCC-------
Confidence 123 6999999999999888766 3899999999999876421 111111111111 111
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 239 --~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 239 --MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp --TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred --CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 124678999999999998653 357889998764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=172.04 Aligned_cols=229 Identities=15% Similarity=0.139 Sum_probs=165.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+.++++|||||+|+||++++++|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++..
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNES--NIARIREE-FGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 446689999999999999999999999 899999999742 11111110 124678999999999988766532
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|++||+||...... ..+++...+++|+.++.++++++...- ...++|++||...+...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 146 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH------------- 146 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-------------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-------------
Confidence 37999999999765322 334566789999999999999997631 13589999998765422
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCceEEecCCCceEec
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKL----IPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.+..+....... ...+........+ ...+
T Consensus 147 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~ 216 (255)
T 4eso_A 147 -PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MKRN 216 (255)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TSSC
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CCCC
Confidence 234579999999999999888774 8999999999999875321111 1122222222111 1245
Q ss_pred ccHHHHHHHHHHHHhcC--CCCcEEEecCCCccCHH
Q 035631 232 LYCADVAEAFDVILHRG--VIGHVYNVGTKKERSVL 265 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~--~~~~~~ni~~~~~~t~~ 265 (684)
...+|+|++++.++... ..++.+++.+|...++.
T Consensus 217 ~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 217 GTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp BCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred cCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence 68999999999888642 35789999988766543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-19 Score=179.43 Aligned_cols=228 Identities=14% Similarity=0.124 Sum_probs=161.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++.+|+........+.. .....++.++.+|+.|.+++..++..
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999988632221111110 01234688899999999988776642
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||.... ....+++...+++|+.++.++++++...- .-.+||++||...+...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~----------- 193 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS----------- 193 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------
Confidence 389999999997532 12334556789999999999999997653 12499999998876432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.|+++.............. .........+..
T Consensus 194 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~p~~r~~~ 261 (294)
T 3r3s_A 194 ---PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ---------FGQQTPMKRAGQ 261 (294)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTT---------TTTTSTTSSCBC
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHH---------HHhcCCCCCCcC
Confidence 234579999999999998887765 89999999999988631000000000000 011112234678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
.+|+|++++.++... ..++++++.+|..+
T Consensus 262 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 262 PAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 899999999998643 36789999988654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=173.12 Aligned_cols=222 Identities=13% Similarity=0.162 Sum_probs=160.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.++++|||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++.+++..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVE--RLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999 899999999642 1111110 01135688999999999998877643
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 153 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS------------ 153 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC------------
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC------------
Confidence 279999999987422 22334556788999999999998875321 0269999999876532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 222 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|+++... ... ..+........
T Consensus 154 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (264)
T 3ucx_A 154 --QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLK--SYFEHQAGKYGTSVEDIYNAAAAGS----- 224 (264)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHH--HHHHHHHHHTTCCHHHHHHHHHTTS-----
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHH--HHHHhhhhhcCCCHHHHHHHHhccC-----
Confidence 223457999999999999888776 5899999999999886321 111 11222222222
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
....+.+.+|+|++++.++... ..++.+++.+|..
T Consensus 225 ----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 225 ----DLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp ----SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred ----CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 2235688999999999998643 3688999988764
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-19 Score=178.25 Aligned_cols=227 Identities=14% Similarity=0.140 Sum_probs=158.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCC---CCCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLH---PSRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+..... ...+. ......++.++.+|+.|.+.+..++..
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 44589999999999999999999999 899999999742111 00010 001235788999999999998887743
Q ss_pred -----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||..... ...++....+++|+.++.++++++... ....++|++||...++
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--------- 164 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG--------- 164 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC---------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC---------
Confidence 2699999999964322 222345667899999999999997652 1147899999976221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCC--CCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPN--QFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
..+...|+.+|...+.+.+.++.+. +++++++||++++|+. .........+........ .
T Consensus 165 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------p 229 (303)
T 1yxm_A 165 ------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI---------P 229 (303)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS---------T
T ss_pred ------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC---------c
Confidence 1123579999999999998887764 8999999999999983 211100011111111100 1
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
...+.+++|+|++++.++... ..++.+++.+|...
T Consensus 230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~ 267 (303)
T 1yxm_A 230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL 267 (303)
T ss_dssp TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence 124688999999999998643 35789999988654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=169.56 Aligned_cols=220 Identities=17% Similarity=0.210 Sum_probs=154.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.... ...+. ..++.++.+|+.|.+++..++..
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHAS-VTELR----QAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHH-HHHHH----HHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHH-HHHHH----hcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 34578999999999999999999999 89999999975321 11111 12478899999999988877643
Q ss_pred CCCCEEEEcCccCCcCCCC---CChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNSF---GNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|+|||+||........ +++...+++|+.++.++++++... ....++|++||...+...
T Consensus 98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------- 164 (260)
T 3gem_A 98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS------------- 164 (260)
T ss_dssp SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-------------
T ss_pred CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-------------
Confidence 3799999999976543222 234468899999999999887532 225799999998765321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.+..+..... ..........++ ..+...+|
T Consensus 165 -~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~----~~~~~~~~~~p~---------~r~~~~ed 230 (260)
T 3gem_A 165 -SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA----AYRANALAKSAL---------GIEPGAEV 230 (260)
T ss_dssp -SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCS---------CCCCCTHH
T ss_pred -CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH----HHHHHHHhcCCC---------CCCCCHHH
Confidence 234579999999999999888775 48899999999987643211 111111111111 23456899
Q ss_pred HHHHHHHHHhcC-CCCcEEEecCCCccC
Q 035631 237 VAEAFDVILHRG-VIGHVYNVGTKKERS 263 (684)
Q Consensus 237 ~a~~i~~~~~~~-~~~~~~ni~~~~~~t 263 (684)
+|++++.++... ..++.+++.+|..++
T Consensus 231 va~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 231 IYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp HHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred HHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 999999998654 367899999886654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=172.43 Aligned_cols=224 Identities=15% Similarity=0.022 Sum_probs=159.6
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+ |+||+++++.|+++ |++|++++|+.... ....+... ...+.++.+|+.|.+++..++..
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK 79 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEcCCCCHHHHHHHHHHHH
Confidence 456899999999 99999999999999 89999999975210 11111110 12378899999999988877642
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------- 151 (275)
T 2pd4_A 80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-------- 151 (275)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------
T ss_pred HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC--------
Confidence 278999999997642 22334566788999999999999998651 0269999999766422
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|...+.+.+.++.+. +++++.++||.+.++........+.+........++ .
T Consensus 152 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 216 (275)
T 2pd4_A 152 ------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------R 216 (275)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------C
Confidence 1234579999999999998887664 899999999999987432111122333322222111 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+...+|+|++++.++... ..++.+++.++.
T Consensus 217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 3467899999999998642 357788888764
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-19 Score=174.00 Aligned_cols=222 Identities=15% Similarity=0.085 Sum_probs=155.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
..+.+++||||||+|+||+++++.|+++ |++|++.+|+.. ....+.. .....+.++.+|+.|.+++..++..
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTRED--KLKEIAA-DLGKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH-HhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 3445689999999999999999999999 899999998642 2111111 1134688999999999998877643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~--------- 167 (266)
T 3grp_A 98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGN--------- 167 (266)
T ss_dssp HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC---------------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCC---------
Confidence 3899999999976432 223345678899999966666555 3444 5799999997664221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.+.++... ..............+ ...+
T Consensus 168 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p---------~~r~ 231 (266)
T 3grp_A 168 -----PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD--KLNEKQKEAIMAMIP---------MKRM 231 (266)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--TCCHHHHHHHHTTCT---------TCSC
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh--ccCHHHHHHHHhcCC---------CCCC
Confidence 234579999999999998887763 799999999999876321 111223333333322 2356
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+.+|+|++++.++... ..++.+++.+|.
T Consensus 232 ~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 232 GIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 78999999999998653 367899998774
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-18 Score=170.41 Aligned_cols=230 Identities=18% Similarity=0.069 Sum_probs=159.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+. .....+.++.+|+.|.+++..++...
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIV--GAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHT--TTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999 899999999742111 11111 12356889999999999888777432
Q ss_pred ---CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|++||+||.... ....+++...+++|+.++.++++++ ++.+ ..++|++||...+...
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-------- 172 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTF-------- 172 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC--------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCC--------
Confidence 89999999997532 2223345678899999999999988 4444 5899999997654211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce--
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV-- 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (684)
+..+...|+.+|...+.+.+.++.+ +++++..++||.+..+.......... .....+..........
T Consensus 173 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~ 244 (283)
T 3v8b_A 173 ----TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE----EETAIPVEWPKGQVPITD 244 (283)
T ss_dssp ----CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH----HHHSCCCBCTTCSCGGGT
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc----hhhhhhhhhhhhcCcccc
Confidence 1223467999999999999998877 37889999999998875321110000 0000111111111111
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+...+|+|++++.++... ..|+.+++.+|.
T Consensus 245 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 245 GQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp TCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 24578899999999998643 357889998763
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=174.65 Aligned_cols=225 Identities=16% Similarity=0.126 Sum_probs=161.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+..... ..+.. .....++.++.+|+.|.+++..++..
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDA-NETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 899999998753111 11000 11235688999999999988877643
Q ss_pred --CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+...
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 190 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN----------- 190 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------
Confidence 2799999999975432 1334566789999999999999997642 23699999998876432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.|+++.... ..-....... ........+.+
T Consensus 191 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~---------~~~~p~~r~~~ 257 (291)
T 3ijr_A 191 ---ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS-SFDEKKVSQF---------GSNVPMQRPGQ 257 (291)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH-HSCHHHHHHT---------TTTSTTSSCBC
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc-cCCHHHHHHH---------HccCCCCCCcC
Confidence 123579999999999998887764 8999999999998863100 0001111111 11112235678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+|+|++++.++... ..++.+++.+|..
T Consensus 258 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 258 PYELAPAYVYLASSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp GGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred HHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence 999999999998653 3678999987754
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=169.24 Aligned_cols=210 Identities=15% Similarity=0.089 Sum_probs=152.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCc-------EEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhh
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDY-------EIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+++||||||+|+||++++++|+++ |+ +|++++|+.. ....+.. .....++.++.+|+.|.+.+..++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAA--DLEKISLECRAEGALTDTITADISDMADVRRLT 77 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHH--HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHH--HHHHHHHHHHccCCeeeEEEecCCCHHHHHHHH
Confidence 478999999999999999999999 77 9999999642 1111110 011346788999999999888776
Q ss_pred cc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCC
Q 035631 83 VS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 83 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
.. .++|+|||+||..... ...++....+++|+.++.++++++.. .+ ..+||++||...+..
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~----- 151 (244)
T 2bd0_A 78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA----- 151 (244)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----
T ss_pred HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCC-----
Confidence 42 2799999999976432 22345667889999999999988743 33 689999999887642
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
..+...|+.+|...|.+.+.++.+ ++++++++|||+++++...... .. .
T Consensus 152 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~-------~- 203 (244)
T 2bd0_A 152 ---------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------DE-------M- 203 (244)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------ST-------T-
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------cc-------c-
Confidence 223467999999999999777654 4899999999999998542110 00 0
Q ss_pred ceEecccHHHHHHHHHHHHhcCCC---CcEEEecCCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRGVI---GHVYNVGTKK 260 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~~~---~~~~ni~~~~ 260 (684)
...+++.+|+|++++.++..+.. ++++....++
T Consensus 204 -~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~ 239 (244)
T 2bd0_A 204 -QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSG 239 (244)
T ss_dssp -GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred -cccCCCHHHHHHHHHHHHhCCccccchheEEecccc
Confidence 12578999999999999976532 3444444433
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=170.30 Aligned_cols=221 Identities=15% Similarity=0.108 Sum_probs=154.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|... .....+.. .....++.++.+|+.|.+++..++..
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNE-QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999 899999998321 11111100 00124678899999999998877742
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++. +.+ ..++|++||...+...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 148 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGN---------- 148 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCC----------
Confidence 2799999999975432 2233456788999999777666553 444 6899999998664321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.+.++...... ...........+ ...+.
T Consensus 149 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p---------~~~~~ 213 (246)
T 2uvd_A 149 ----PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIP---------AAQFG 213 (246)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCT---------TCSCB
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCC---------CCCCc
Confidence 12357999999999998877665 4899999999999876432110 111111211111 12478
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 214 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 214 EAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 9999999999998643 357889998764
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=168.53 Aligned_cols=221 Identities=16% Similarity=0.103 Sum_probs=160.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+.++++|||||+|+||+++++.|+++ |++|++++|+... ...+... .......+.+|+.|.+++..+++.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESG--AQAISDY-LGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHH-hcccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 345689999999999999999999999 8999999997421 1111100 112467889999999998877643
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~----------- 148 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMG----------- 148 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC-----------
Confidence 2899999999976432 23345667889999999999988753 33 579999999776532
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.+..+... ..............+ ...+.
T Consensus 149 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~p---------~~r~~ 214 (248)
T 3op4_A 149 ---NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK--ALNDEQRTATLAQVP---------AGRLG 214 (248)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTT--TSCHHHHHHHHHTCT---------TCSCB
T ss_pred ---CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhh--hcCHHHHHHHHhcCC---------CCCCc
Confidence 123457999999999999888766 3899999999999887432 111222222222221 12567
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+|+|+++..++... ..++.+++.+|.
T Consensus 215 ~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 215 DPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 8999999999998643 357899998774
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-18 Score=170.27 Aligned_cols=232 Identities=9% Similarity=0.001 Sum_probs=154.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+...... ..+.......++.++.+|+.|.+++..++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999996421110 001000001268889999999998877764
Q ss_pred cCCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 84 SEGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+...
T Consensus 83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 151 (260)
T 2z1n_A 83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPW---------- 151 (260)
T ss_dssp TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----------
T ss_pred hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC----------
Confidence 12499999999965432 223355678899999996666655 3444 6899999998876421
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHH--HHHcCCceEEecCCCceEe
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFIL--LAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...+.+.+.++.++ ++++++++||+++++.... ....... ...................
T Consensus 152 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r 225 (260)
T 2z1n_A 152 ----QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRS--LAEERARRSGITVEEALKSMASRIPMGR 225 (260)
T ss_dssp ----TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------------CCTTSS
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhh--hhhhhhcccCCcHHHHHHHHHhcCCCCC
Confidence 224579999999999998887664 8999999999999875320 0000000 0000000000000011124
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 226 ~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 226 VGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred ccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 678999999999998642 357889998763
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-19 Score=174.45 Aligned_cols=222 Identities=14% Similarity=0.066 Sum_probs=159.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. ......+..+.+|+.|.+++..++..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAG--AEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8999999996421 111100 01124678899999999988877643
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 171 (270)
T 3ftp_A 103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGN---------- 171 (270)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC----------
Confidence 2799999999976432 23344567889999999999988752 23 4799999997765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+ .++++..++||.|..+... .+............+ ...+.
T Consensus 172 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~p---------~~r~~ 236 (270)
T 3ftp_A 172 ----PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK--GLPQEQQTALKTQIP---------LGRLG 236 (270)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--HSCHHHHHHHHTTCT---------TCSCB
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh--hcCHHHHHHHHhcCC---------CCCCC
Confidence 23357999999999999888776 4899999999999875210 011122222222221 23567
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 237 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 237 SPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence 8999999999998542 36789999987654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-19 Score=175.87 Aligned_cols=215 Identities=11% Similarity=-0.039 Sum_probs=142.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeee-----------eccCCChhHHHHHHHhc--CCCeEEEcceecCCCCcccc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFG-----------TGRLEDKNSLLDDMKRV--RPTHVLNAAGITGRPNVDWC 438 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~-----------~~d~~d~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~ 438 (684)
++||||||+|+||++++++|+++|++|... .+|++|.+++.++++.+ ++|+|||+||.. . .
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~---~---~ 75 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG---V---T 75 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC---T---T
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC---C---c
Confidence 489999999999999999999999998543 46778888888888855 679999999965 1 1
Q ss_pred ccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCC-CCC-CCCccC-------CCCCCCCChhh
Q 035631 439 ESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQ-GSS-IGFKED-------DEPNFTRSFYS 504 (684)
Q Consensus 439 ~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~-~~~-~~~~e~-------~~~~~p~~~Y~ 504 (684)
.......+++|+.++.+++++|... + .++|++||..+|++....+. .+. ...+|+ ..+. +.+.|+
T Consensus 76 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~ 154 (255)
T 2dkn_A 76 AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ-THLAYA 154 (255)
T ss_dssp SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC-HHHHHH
T ss_pred chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC-cchhHH
Confidence 3456789999999999999988764 3 47999999999864321110 000 000011 0112 557899
Q ss_pred hhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 505 KTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 505 ~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+|...|.+..... .+..+.+.++..+.+......+..... ......+. + ..+.|
T Consensus 155 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~----------------- 214 (255)
T 2dkn_A 155 GSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY-GESTRRFV-A-PLGRG----------------- 214 (255)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT-HHHHHSCC-C-TTSSC-----------------
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh-HHHHHHHH-H-HhcCC-----------------
Confidence 99999998743322 344555666665544432211111000 00000000 1 22345
Q ss_pred cchhhHHHHHHHHHhcC---c-cceeEecCCCcccHHH
Q 035631 580 TVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISHNE 613 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~~e 613 (684)
+|++|+|++++.+++.+ . +..||++++..++++|
T Consensus 215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 99999999999999765 3 4499999988777654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.8e-19 Score=176.88 Aligned_cols=240 Identities=13% Similarity=0.076 Sum_probs=165.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCC-CCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSR-ASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.... ...++.++.+|+.|.+++..++..
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 00111000 011578899999999988877642
Q ss_pred ---CCCCEEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... .. .++|++||...+...
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~------- 173 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------- 173 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-------
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-------
Confidence 2799999999975432 123345678899999999999888643 22 799999998775422
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--Ch-----HHHHHHHHHcCCceEEe
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE--KL-----IPKFILLAMKGQQLPIH 222 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~-----~~~~~~~~~~~~~~~~~ 222 (684)
..+...|+.+|...+.+.+.++.+ +++++++++||++.++..... .- ........ ....
T Consensus 174 ------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 242 (297)
T 1xhl_A 174 ------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR--KECI--- 242 (297)
T ss_dssp ------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC--TTTC---
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH--HhcC---
Confidence 022357999999999999888754 589999999999988632100 00 00111111 1111
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC----CCCcEEEecCCCccCHHHHHHHHHHH
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTKKERSVLDVAADICTL 274 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~~~~t~~e~~~~i~~~ 274 (684)
....+...+|+|++++.++... ..++.+++.+|......+.+..+.+.
T Consensus 243 ----p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 243 ----PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred ----CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence 1124688999999999998643 46789999988776666554444443
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=169.21 Aligned_cols=222 Identities=17% Similarity=0.146 Sum_probs=160.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||+++++.|+++ |++|++++|+.. ....+.... ..++.++.+|+.|.+++..++..
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREER--LLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999742 111111111 14678899999999988877643
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
.++|+|||+||...... ..++....+++|+.++.++++++...- ...++|++||...++ .
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~-------------- 143 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-A-------------- 143 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-H--------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-C--------------
Confidence 26899999999764322 122345678999999999999987642 136999999987762 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.+.++.... ..+..........+. ..+.+.+|
T Consensus 144 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~~~~~p~d 212 (263)
T 2a4k_A 144 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--LPPWAWEQEVGASPL---------GRAGRPEE 212 (263)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT--SCHHHHHHHHHTSTT---------CSCBCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh--cCHHHHHHHHhcCCC---------CCCcCHHH
Confidence 11346999999999998887765 38999999999999874321 112222222222211 24678999
Q ss_pred HHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 237 VAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 237 ~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
+|++++.++... ..++.+++.+|...
T Consensus 213 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 213 VAQAALFLLSEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHhCccccCCcCCEEEECCCccc
Confidence 999999998653 35788999877543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=167.79 Aligned_cols=214 Identities=16% Similarity=0.169 Sum_probs=153.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc-----cCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV-----SEG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~~ 86 (684)
+|+||||||+|+||+++++.|+++ |++|++++|+... ....+ ++..+.+|+.| +++..++. ..+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~-~~~~~-------~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEE-AAQSL-------GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHH-------TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH-HHHhh-------CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 578999999999999999999999 8999999997532 11111 27788999998 65554432 137
Q ss_pred CCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 87 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
+|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 137 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG------------ 137 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC------------
Confidence 99999999975432 2233456788999999999988874 334 68999999988764321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCceEeccc
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|...+.+.+.++.+. +++++++|||++.++... ... +.+........+ ...+..
T Consensus 138 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~p---------~~~~~~ 206 (239)
T 2ekp_A 138 PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL--PLRQNPELYEPITARIP---------MGRWAR 206 (239)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--HHHTCHHHHHHHHTTCT---------TSSCBC
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh--ccccCHHHHHHHHhcCC---------CCCCcC
Confidence 1234689999999999998887764 899999999999886421 000 122222222111 124678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+|+|++++.++... ..++.+++.+|.
T Consensus 207 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 207 PEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 999999999998642 357888888763
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-18 Score=165.88 Aligned_cols=214 Identities=15% Similarity=0.138 Sum_probs=156.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHh-cCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---CC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIK-NYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---EG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~ 86 (684)
.+++||||||+|+||+++++.|++ . +++|++.+|+.. .....+.++.+|+.|.+++..++.. .+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~--g~~v~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNK--NHTVINIDIQQS----------FSAENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTST--TEEEEEEESSCC----------CCCTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcC--CcEEEEeccccc----------cccccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 457899999999999999999999 5 899999988641 1224678999999999998877632 27
Q ss_pred CCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 87 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
+|++||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+.. ..+
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------~~~ 136 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA--------------KPN 136 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC--------------CTT
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC--------------CCC
Confidence 99999999975432 2334456788999999999999987642 1148999999877532 122
Q ss_pred CChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHH-----------HHHHHHcCCceEEecCCCc
Q 035631 162 TNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPK-----------FILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 227 (684)
...|+.+|...+.+.+.++.+ +++++..++||.+.++... ..... ......... .
T Consensus 137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------p 205 (244)
T 4e4y_A 137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR--NLIQKYANNVGISFDEAQKQEEKEF---------P 205 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH--HHHHHHHHHHTCCHHHHHHHHHTTS---------T
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH--HHHHhhhhhcCCCHHHHHHHHhhcC---------C
Confidence 357999999999999888764 4899999999999875320 11111 111111111 1
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+.+.+|+|++++.++... ..++.+++.+|..
T Consensus 206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 235678999999999999643 3578999987743
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-18 Score=166.54 Aligned_cols=223 Identities=15% Similarity=0.122 Sum_probs=153.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+........+. ....++.++.+|+.|.+++..++..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIR--NLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHH--hcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 89999999975111111111 1124688899999999988777532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++.++ +++.+ ..++|++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 148 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI----------- 148 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-----------
Confidence 3799999999975432 22334567889999998888777 44444 6899999998776421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.+.++.... ...... ...... +. .....+.+
T Consensus 149 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~-~~~~~~--~~-----~~~~~~~~ 216 (249)
T 2ew8_A 149 ---EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA-SALSAM-FDVLPN--ML-----QAIPRLQV 216 (249)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C--TT-----SSSCSCCC
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh-ccccch-hhHHHH--hh-----CccCCCCC
Confidence 234579999999999998887763 8999999999998874310 110000 000000 00 01124688
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+|+|++++.++... ..++.+++.+|.
T Consensus 217 p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 217 PLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred HHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 999999999998643 357889998764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=169.08 Aligned_cols=222 Identities=16% Similarity=0.120 Sum_probs=157.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+++||||||+|+||+++++.|+++ |++|++++|+........+.. .....++.++.+|+.|.+++..++..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999 899999999653200111100 01134688899999999988777642
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCC-cEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQV-KRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~-~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... + . .++|++||...+..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----------- 147 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQG----------- 147 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccC-----------
Confidence 2799999999975432 223345678899999999999888652 4 4 79999999876532
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH-----------HHHHHHHcCCceEE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP-----------KFILLAMKGQQLPI 221 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~ 221 (684)
..+...|+.+|...+.+.+.++.+ +++++.+++||.+..+... .... ..........
T Consensus 148 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---- 218 (258)
T 3a28_C 148 ---FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE--QIDAELSKINGKPIGENFKEYSSSI---- 218 (258)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH--HHHHHHHHHHCCCTTHHHHHHHTTC----
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh--hhhhhhccccCCchHHHHHHHHhcC----
Confidence 123457999999999999888766 3899999999998765210 0000 0111111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
....+...+|+|++++.++... ..++.+++.+|..
T Consensus 219 -----p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 256 (258)
T 3a28_C 219 -----ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML 256 (258)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred -----CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence 1124688999999999998653 3678999987754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.4e-18 Score=169.89 Aligned_cols=222 Identities=16% Similarity=0.079 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++++||||||+|+||++++++|+++ |++|+++.+............ .....++.++.+|+.|.+++.+++..
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 446689999999999999999999999 899977654321111100000 01235788999999999998877643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH-----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK-----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...++....+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 171 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGN-------- 171 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCC--------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCC--------
Confidence 2899999999976532 2334566788999999999998873 333 5899999997765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...+.+.+.++.+. ++++..++||.+.++..... ...........+. ..
T Consensus 172 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~---------~~ 233 (267)
T 4iiu_A 172 ------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPM---------KR 233 (267)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTT---------CS
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCC---------CC
Confidence 234579999999998888877664 79999999999998754221 3333333332221 24
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|+++..++... ..|+.+++.+|
T Consensus 234 ~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 234 MGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 578999999999998653 46789999866
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=172.62 Aligned_cols=233 Identities=15% Similarity=0.059 Sum_probs=164.9
Q ss_pred CCCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 9 SYKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 9 ~~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
...+++||||||+ |+||+++++.|+++ |++|++++|+..... ...+.. ....+.++.+|+.|.+++..++...
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAA--EFGSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHH--HcCCcEEEECCCCCHHHHHHHHHHH
Confidence 4457899999999 99999999999999 899999998742111 111111 1234789999999999988777432
Q ss_pred -----CCCEEEEcCccCCc---------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCC
Q 035631 86 -----GIDTIMHFAAQTHV---------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 86 -----~~d~Vih~a~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
++|+|||+||.... ....++....+++|+.++.++++++...- ...++|++||...+..
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------ 160 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA------ 160 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC------
Confidence 79999999997643 13334566788999999999999997641 1358999999776532
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
..+...|+.+|+..+.+.+.++.+. ++++..++||.|..+........+.+........++
T Consensus 161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-------- 224 (271)
T 3ek2_A 161 --------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL-------- 224 (271)
T ss_dssp --------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT--------
T ss_pred --------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc--------
Confidence 2234679999999999998887664 899999999999887542211223333333322221
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHHHHH
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVLDVA 268 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~e~~ 268 (684)
..+...+|+|++++.++... ..++.+++.+|...++.++.
T Consensus 225 -~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~ 267 (271)
T 3ek2_A 225 -KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA 267 (271)
T ss_dssp -SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred -CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence 23567899999999999742 36789999998877665543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-18 Score=165.96 Aligned_cols=213 Identities=14% Similarity=0.106 Sum_probs=152.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. .. ..+..+.+|+.|.+++..++..
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSG--AP---------KGLFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSC--CC---------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChH--HH---------HHhcCeeccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999642 11 1222478999999988777643
Q ss_pred CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||.... ....+++...+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 147 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI----------- 147 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-----------
Confidence 278999999997542 223345667889999999999988753 33 6899999997654211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.+.++... .+............ ....+.+
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~---------p~~~~~~ 213 (247)
T 1uzm_A 148 ---GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR--ALDERIQQGALQFI---------PAKRVGT 213 (247)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HSCHHHHHHHGGGC---------TTCSCBC
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh--hcCHHHHHHHHhcC---------CCCCCcC
Confidence 12457999999999999888766 4899999999999765210 00011111111111 1124689
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+|+|++++.++... ..++.+++.+|..
T Consensus 214 ~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 214 PAEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 999999999998643 3678999987754
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=172.28 Aligned_cols=222 Identities=14% Similarity=0.120 Sum_probs=158.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+. .....+.++.+|+.|.+++..++..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLR--AAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--TTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 899999999742111 01111 1235688999999999988777643
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh------cCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL------TGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~------~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...++....+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~--------- 168 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQG--------- 168 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSC---------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccC---------
Confidence 2799999999976432 22234556788999999999998754 33 579999999876532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---------CChHHHHHHHHHcCCceEE
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP---------EKLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~ 221 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|.++.... ...............
T Consensus 169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (279)
T 3sju_A 169 -----VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---- 239 (279)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC----
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC----
Confidence 223457999999999999988877 47999999999997752100 001122222222222
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
....+..++|+|++++.++... ..|+.+++.+|.
T Consensus 240 -----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 240 -----PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp -----TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred -----CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 1235678999999999998643 468899998774
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.8e-18 Score=168.17 Aligned_cols=225 Identities=14% Similarity=0.095 Sum_probs=160.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ....+..+.+|+.|.+++..++...
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNED--AAVRVANE-IGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999642 11111110 1346888999999999988777432
Q ss_pred -CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------------ 166 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSA------------ 166 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcC------------
Confidence 8999999999764322 223455678899999998888874 333 579999999877632
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|...+.+.+.++.++ ++++..++||.+.++... ................ ...
T Consensus 167 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 235 (277)
T 4dqx_A 167 --IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMD 235 (277)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTC
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------ccc
Confidence 2234579999999999998887764 799999999999765200 0000111111122211 123
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.+...+|+|++++.++... ..|+.+++.+|..++
T Consensus 236 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 236 RMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 5678999999999998653 368899999886543
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=171.71 Aligned_cols=226 Identities=15% Similarity=0.127 Sum_probs=158.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
...+++||||||+|+||++++++|+++ |++|++.++.........+.. ......+.++.+|+.|.+++..++...
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 445689999999999999999999999 899999884322111110000 012346889999999999887776432
Q ss_pred ---CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+..
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------- 156 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKG---------- 156 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGS----------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccC----------
Confidence 799999999976532 223445678899999988887666 4444 589999999766532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|.+.+.+.+.++.+ .++++..++||.+.++... ...+..........+. ..+
T Consensus 157 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~---------~~~ 221 (256)
T 3ezl_A 157 ----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIPV---------RRL 221 (256)
T ss_dssp ----CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHHHSTT---------SSC
T ss_pred ----CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc--ccCHHHHHHHHhcCCC---------CCC
Confidence 223467999999999999888766 4799999999999876321 1122333333322211 245
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
...+|+|+++..++... ..++.+++.+|..+
T Consensus 222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 222 GSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred cCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 78999999999988642 46789999887543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=173.41 Aligned_cols=227 Identities=12% Similarity=0.092 Sum_probs=158.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCC-CCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSR-ASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.... ...++.++.+|+.|.+++..++..
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 01111110 011678899999999988877642
Q ss_pred ---CCCCEEEEcCccCCcC--------CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD--------NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... .. .++|++||...+...
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----- 155 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA----- 155 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-----
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-----
Confidence 2799999999975432 122345678899999999999888642 11 799999998775322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--Ch-----HHHHHHHHHcCCceE
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE--KL-----IPKFILLAMKGQQLP 220 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~-----~~~~~~~~~~~~~~~ 220 (684)
..+...|+.+|...+.+.+.++.+ +++++++++||++.++..... .- ...+..... ...
T Consensus 156 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 224 (280)
T 1xkq_A 156 --------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK--ECI- 224 (280)
T ss_dssp --------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTC-
T ss_pred --------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH--cCC-
Confidence 023457999999999999888754 589999999999998732100 00 001111111 111
Q ss_pred EecCCCceEecccHHHHHHHHHHHHhcC----CCCcEEEecCCCc
Q 035631 221 IHGNGSNVRSYLYCADVAEAFDVILHRG----VIGHVYNVGTKKE 261 (684)
Q Consensus 221 ~~~~~~~~~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~~~ 261 (684)
....+.+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 225 ------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 225 ------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp ------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred ------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 1124789999999999988643 4678999988754
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=170.07 Aligned_cols=224 Identities=14% Similarity=0.094 Sum_probs=160.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++.+++...
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSD--ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGG--GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 899999999642 1111110 012346889999999999988877432
Q ss_pred ---CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
++|+|||+||...... ..++....+++|+.++.++++++.. .+...++|++||...+...
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~--------- 176 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN--------- 176 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------
Confidence 8999999999765432 2234556778999999999988753 2213789999997664321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
...+...|+.+|...+.+.+.++.+ +++++..++||.|..+.... ............+ ...+
T Consensus 177 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---~~~~~~~~~~~~p---------~~r~ 241 (276)
T 3r1i_A 177 ---IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP---LADYHALWEPKIP---------LGRM 241 (276)
T ss_dssp ---CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG---GGGGHHHHGGGST---------TSSC
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---chHHHHHHHhcCC---------CCCC
Confidence 1123467999999999999988877 58999999999998875321 1111222221111 1245
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+|+|++++.++... ..++.+++.+|..
T Consensus 242 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 242 GRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp BCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence 77899999999998643 3678999987743
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=162.83 Aligned_cols=219 Identities=20% Similarity=0.160 Sum_probs=156.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.... ++.++.+|+.|.+++..++..
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEG--PLREAAEAV---GAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHc---CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 899999999642 221111111 378899999999988877643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||..... ...++....+++|+.++.++.+++... ....++|++||...++.
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------- 142 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------- 142 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC-------------
Confidence 2699999999975432 122345578899999999998887542 12689999999874332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.+..+... .+............+. ..+...
T Consensus 143 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~~~~~~ 209 (245)
T 1uls_A 143 --LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA--KVPEKVREKAIAATPL---------GRAGKP 209 (245)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--SSCHHHHHHHHHTCTT---------CSCBCH
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh--hcCHHHHHHHHhhCCC---------CCCcCH
Confidence 12357999999999998887765 4899999999999877432 1112222222222111 136789
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+|+|++++.++... ..++.+.+.+|..
T Consensus 210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 99999999998653 3578899887643
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=168.86 Aligned_cols=229 Identities=14% Similarity=0.054 Sum_probs=153.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE---- 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (684)
+.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.. .....+.++.+|+.|.+++.+++...
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKA--GAERVAG-EIGDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 899999999742 1111111 11346889999999999988776432
Q ss_pred -CCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhcC-------CCcEEEEEeCcccccCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLTG-------QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-------~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++|+|||+||..... ...++....+++|+.++.++++++...- ...++|++||...+..
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 153 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-------- 153 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC--------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC--------
Confidence 799999999976421 1233455688999999998888774321 1357999999766522
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|+..+.+.+.++.+ +++++..++|+.+.++... .+........ ...........
T Consensus 154 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~-----~~~~~~~~~~~ 220 (261)
T 3n74_A 154 ------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT--TFMGEDSEEI-----RKKFRDSIPMG 220 (261)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CTTS
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh--hhcccCcHHH-----HHHHhhcCCcC
Confidence 223456999999999999888776 4899999999999887431 1110000000 00111112223
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
.+++.+|+|++++.++... ..++.+++.+|..++-
T Consensus 221 ~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 221 RLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred CCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 6789999999999998643 3688999998876643
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=171.98 Aligned_cols=224 Identities=15% Similarity=0.104 Sum_probs=148.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.++++|||||+|+||+++++.|+++ |++|++++|+... ....+.. .....++.++++|+.|.+++..++..
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAE-GVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHH-HHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8999999874321 1111100 01235688999999999887777642
Q ss_pred -CCCCEEEEcCccCC--c----CCCCCChHHHHHHHHHHHHHHHHHHHhc----C--CCcEEEEEeCcccccCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTH--V----DNSFGNSFEFTNNNIYGTHVLLEACKLT----G--QVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 -~~~d~Vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~--~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|+|||+||... . ....+++...+++|+.++.++++++... + ...++|++||...+..
T Consensus 105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------- 177 (280)
T 4da9_A 105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT------- 177 (280)
T ss_dssp HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-------
Confidence 28999999999732 1 1233455677899999999888887542 1 1368999999776522
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|.++... ............ . ....
T Consensus 178 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~-~-------~~p~ 240 (280)
T 4da9_A 178 -------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA--AVSGKYDGLIES-G-------LVPM 240 (280)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh--hcchhHHHHHhh-c-------CCCc
Confidence 122357999999999999988877 4789999999999887431 111111111111 0 1112
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+...+|+|++++.++... ..++.+++.+|..
T Consensus 241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (280)
T 4da9_A 241 RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276 (280)
T ss_dssp -CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 35678999999999999754 3578999988754
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.5e-18 Score=167.62 Aligned_cols=230 Identities=14% Similarity=0.081 Sum_probs=155.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCC--C-CCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR--A-SPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~--~-~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+.... ...+.... . ..++.++.+|+.|.+++..++..
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAE-IEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHH-HHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchH-HHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999 89999999975320 11110000 0 23578889999999988877642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..+||++||...+...
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--------- 149 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS--------- 149 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---------
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCC---------
Confidence 2799999999975432 22334567889999999998888743 34 5899999998775321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHH-c-CCceEEe-cCCCce
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAM-K-GQQLPIH-GNGSNV 228 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~ 228 (684)
.+...|+.+|...+.+.+.++.+. +++++.++||++.++... ........... . ....... ......
T Consensus 150 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 222 (260)
T 1x1t_A 150 -----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE--KQISALAEKNGVDQETAARELLSEKQPS 222 (260)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCTT
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHH--HhhhhhccccCCchHHHHHHHhhccCCC
Confidence 234579999999999998887664 789999999999987431 11110000000 0 0000000 000011
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 223 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 35789999999999998643 357899998774
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=168.42 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=153.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|+||||||+|+||++++++|+++ |++|++++|+.. ....+.... ..++.++.+|+.|.+++..++..
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEA--AGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999642 111111000 24678899999999988777643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ .++|++||...+...
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~----------- 145 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI----------- 145 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCC-----------
Confidence 2689999999976432 122345667899988777666554 4444 899999998776321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---c--CCCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCceEEecCCCce
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---Y--GLPTITTRGNNVYGPNQF---PEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.+...|+.+|...|.+.+.++.+ + +++++++||++++++... +.... ........ .....
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~-----~~~p~ 213 (253)
T 1hxh_A 146 ---EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDP-----KLNRA 213 (253)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBT-----TTBTT
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhh----HHHHhhhh-----ccCcc
Confidence 23457999999999999888765 3 899999999999986310 00000 00001100 00011
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 214 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 214 GRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred CCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 24688999999999998753 357889998764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.4e-18 Score=169.70 Aligned_cols=220 Identities=16% Similarity=0.105 Sum_probs=159.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++|.... ....+.. ......+.++.+|+.|.+++..++...
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAG-AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8999999884321 1111100 011346888999999999988776432
Q ss_pred --CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------- 172 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGN---------- 172 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC----------
Confidence 899999999976432 2334566788999999999998873 333 5799999997765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.|.++... .... .......+ ...+.
T Consensus 173 ----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~---~~~~~~~p---------~~r~~ 234 (269)
T 4dmm_A 173 ----PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS--ELAA---EKLLEVIP---------LGRYG 234 (269)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC--HHHH---HHHGGGCT---------TSSCB
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc--cccH---HHHHhcCC---------CCCCC
Confidence 22457999999999998888765 4899999999999887531 1111 11111111 12467
Q ss_pred cHHHHHHHHHHHHhcC----CCCcEEEecCCCcc
Q 035631 233 YCADVAEAFDVILHRG----VIGHVYNVGTKKER 262 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~----~~~~~~ni~~~~~~ 262 (684)
..+|+|++++.++..+ ..|+.+++.+|..+
T Consensus 235 ~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 235 EAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp CHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred CHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence 8999999999999762 35889999887654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-19 Score=176.22 Aligned_cols=224 Identities=13% Similarity=0.118 Sum_probs=160.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+++.+++..
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSR--VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHH--HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 8999999996421 111100 01234688899999999998877743
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++.. .+ ..++|++||...+..
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~---------- 168 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELA---------- 168 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB----------
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCC----------
Confidence 2799999999976432 23345567899999999999877653 23 579999999765422
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.+.++... ... +.+........+. .
T Consensus 169 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p~---------~ 233 (271)
T 4ibo_A 169 ----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ--ALIDNPEFDAWVKARTPA---------K 233 (271)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--HHHHCHHHHHHHHHHSTT---------C
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh--hcccCHHHHHHHHhcCCC---------C
Confidence 223457999999999999888776 4899999999999886421 111 1222222222211 2
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.+...+|+|++++.++... ..|+.+++.+|...+
T Consensus 234 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 234 RWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 4567899999999988643 367899999886543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.9e-18 Score=165.31 Aligned_cols=196 Identities=17% Similarity=0.088 Sum_probs=137.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|+++||||||+|+||++++++|+++ |++|++++|+.. ....+... ..++.++.+|+.|.+++..++.. .
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEK--RLQALAAE--LEGALPLPGDVREEGDWARAVAAMEEAFG 77 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH--hhhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999 899999999642 11111110 12678899999999988777642 2
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||...... ..++....+++|+.++.++++. +++.+ .++||++||...+..
T Consensus 78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~------------- 143 (234)
T 2ehd_A 78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNP------------- 143 (234)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSC-------------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCC-------------
Confidence 7999999999754321 2234567889999999755554 44544 689999999876532
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
..+...|+.+|...+.+.+.++.+ .+++++++|||.+..+... . . . .. ..++..
T Consensus 144 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~--------~-~-~~----------~~~~~~ 200 (234)
T 2ehd_A 144 -FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG--N--------T-P-GQ----------AWKLKP 200 (234)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------------------------------------CCH
T ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc--c--------c-c-cc----------cCCCCH
Confidence 223467999999999998877655 4899999999998765321 0 0 0 00 014789
Q ss_pred HHHHHHHHHHHhcCC
Q 035631 235 ADVAEAFDVILHRGV 249 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~ 249 (684)
+|+|++++.++..+.
T Consensus 201 ~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 201 EDVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999997643
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=174.55 Aligned_cols=231 Identities=17% Similarity=0.118 Sum_probs=150.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc---ccCCC--CCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL---KNLHP--SRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++..|+...... ..+.. .....++.++.+|+.|.+++..+++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 34578999999999999999999999 8999998886321111 11100 01134688999999999998887743
Q ss_pred C-----CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 E-----GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ~-----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
. ++|+|||+||..... ...++....+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~----- 154 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTP----- 154 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCC-----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCC-----
Confidence 2 899999999975322 223345567899999999999998 5545 68999999987753211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCceEEec
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP-----EKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.....|+.+|...|.+.+.++.+ +++++++++||.+.++.... ........... .........
T Consensus 155 --------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (324)
T 3u9l_A 155 --------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYE-AGPNAGLGE 225 (324)
T ss_dssp --------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHH-HTTTTTHHH
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhc-cccccCCHH
Confidence 12357999999999999888776 58999999999998653210 00011111111 000000000
Q ss_pred CCC-----ceEecccHHHHHHHHHHHHhcCC--CCcEEEec
Q 035631 224 NGS-----NVRSYLYCADVAEAFDVILHRGV--IGHVYNVG 257 (684)
Q Consensus 224 ~~~-----~~~~~i~~~D~a~~i~~~~~~~~--~~~~~ni~ 257 (684)
.-. ...+..+++|+|++++.++..+. ....+.++
T Consensus 226 ~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g 266 (324)
T 3u9l_A 226 EIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD 266 (324)
T ss_dssp HHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence 000 00012578999999999998763 23456665
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-18 Score=166.06 Aligned_cols=213 Identities=13% Similarity=0.095 Sum_probs=148.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCC-CHHHHHHhhccCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT-CADLMNYLLVSEGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~ 87 (684)
...+++||||||+|+||+++++.|+++ |++|++++|+. .....+ ..+.++ +|+. +.+.+.+.+ .++
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~--~~~~~~------~~~~~~-~D~~~~~~~~~~~~--~~i 82 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNE--ELLKRS------GHRYVV-CDLRKDLDLLFEKV--KEV 82 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHT------CSEEEE-CCTTTCHHHHHHHS--CCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCH--HHHHhh------CCeEEE-eeHHHHHHHHHHHh--cCC
Confidence 445689999999999999999999999 89999999974 112221 245666 9983 233333333 389
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHH----HHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLE----ACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
|+|||+||..... ...++....+++|+.++.++.+ .+++.+ ..+||++||...|...
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------------- 147 (249)
T 1o5i_A 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI-------------- 147 (249)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCC--------------
Confidence 9999999975432 1223456778999998776654 444555 6899999998887432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHH-HHHcCCceEEecCCCceEecccHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFIL-LAMKGQQLPIHGNGSNVRSYLYCA 235 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~ 235 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||.+.++... ........ ......+ ...+.+.+
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~p---------~~~~~~~~ 216 (249)
T 1o5i_A 148 ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK--ELLSEEKKKQVESQIP---------MRRMAKPE 216 (249)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH--HHSCHHHHHHHHTTST---------TSSCBCHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc--ccchhhHHHHHHhcCC---------CCCCcCHH
Confidence 22457999999999999888765 4899999999999987421 00011111 1222111 12568999
Q ss_pred HHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 236 DVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 236 D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
|+|++++.++... ..++.|++.+|.
T Consensus 217 dvA~~i~~l~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 217 EIASVVAFLCSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 9999999988643 357899998774
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=170.08 Aligned_cols=227 Identities=15% Similarity=0.052 Sum_probs=156.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.......++.++.+|+.|.+++..++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999 899999999742111 11121111124578899999999988877643
Q ss_pred -CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHH----HHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV----LLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||... .+++...+++|+.++.. ++..+++.+ ...++|++||...+...
T Consensus 84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 147 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------ 147 (267)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------
T ss_pred cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC------------
Confidence 26899999999753 36678899999886554 455554432 24799999998776431
Q ss_pred CCCCCChhHHHHHHHHHHHHHHH-----HhcCCCEEEEeeCceeCCCCCCCChHHH------HHHHHHcCCceEEecCCC
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYH-----RSYGLPTITTRGNNVYGPNQFPEKLIPK------FILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 226 (684)
.+...|+.+|...+.+.+.++ ...++++++++||.+.++......-... +..... .+ .
T Consensus 148 --~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~-------~ 216 (267)
T 2gdz_A 148 --AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK--DM-------I 216 (267)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH--HH-------H
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH--HH-------h
Confidence 123579999999999987642 2358999999999997752100000000 000000 00 0
Q ss_pred ceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCCccCHHH
Q 035631 227 NVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKERSVLD 266 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~t~~e 266 (684)
....+++.+|+|++++.++... ..++++++.+++..++.|
T Consensus 217 ~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 217 KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 1124689999999999999764 467899999887766544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.9e-18 Score=167.13 Aligned_cols=222 Identities=15% Similarity=0.132 Sum_probs=157.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----C
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----E 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 85 (684)
+.++++|||||+|+||++++++|+++ |++|++++|+.. .....+ ...+.++.+|+.|.+++..+++. .
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~-~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGE-DVVADL-----GDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCH-HHHHHT-----CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchH-HHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 34688999999999999999999999 899999998532 111111 35688999999999998877632 2
Q ss_pred CCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-----------CCCcEEEEEeCcccccCCC
Q 035631 86 GIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-----------GQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 86 ~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----------~~~~~~i~~SS~~vyg~~~ 146 (684)
++|++||+||.... ....+++...+++|+.++.++++++... ....++|++||...+...
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 157 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ- 157 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH-
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC-
Confidence 89999999997532 1334556788999999999999988642 124689999997765321
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEec
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.|..+... ..............+.
T Consensus 158 -------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~---- 218 (257)
T 3tl3_A 158 -------------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA--SLPEEARASLGKQVPH---- 218 (257)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSS----
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh--hccHHHHHHHHhcCCC----
Confidence 12347999999999999888766 4799999999999887432 1222223332222211
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC-CCCcEEEecCCCccC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKERS 263 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~~t 263 (684)
...+.+.+|+|++++.++.++ ..++.+++.+|..++
T Consensus 219 ----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 219 ----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp ----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred ----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 024678999999999999864 367899998876544
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.3e-18 Score=166.71 Aligned_cols=227 Identities=11% Similarity=0.047 Sum_probs=163.0
Q ss_pred CCCCEEEEEcCCch--hHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGF--IGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~--iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+ ||++++++|+++ |++|++++|+..... ...+.......++.++.+|+.|.+++.+++..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 35689999999999 999999999999 899999998742111 11111112223789999999999988877643
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
..+|+|||+||.... ....++....+++|+.++.++++++...- ...++|++||...+..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------- 154 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-------- 154 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC--------
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc--------
Confidence 279999999997641 12233455688999999999999997642 1369999999776532
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|+..+.+.+.++.+. ++++..++||.+..+...................+. .
T Consensus 155 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~ 219 (266)
T 3oig_A 155 ------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------R 219 (266)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------S
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------C
Confidence 2234579999999999998887664 799999999999886432222223333333322211 2
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+...+|+|++++.++... ..++.+++.+|-.
T Consensus 220 ~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 220 RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 3578899999999999753 4678999987743
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=169.88 Aligned_cols=223 Identities=18% Similarity=0.185 Sum_probs=157.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
|++++|||||+|+||++++++|++++.++.|+..+|+.. ....+... ...++.++.+|+.|.+++..++...
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA--PLKKLKEK-YGDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHH--HHHHHHHH-HGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHH--HHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999966789999998642 11111110 1246788999999999988776432
Q ss_pred CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
++|++||+||.... ..+.+++...+++|+.++.++++++ ++.+ .++|++||...+..
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~------------ 143 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY------------ 143 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS------------
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC------------
Confidence 89999999997532 2233445678899999999999988 4444 79999999776532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCceEEecCCCce
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...+.+.+.++.+. ++++..++||.+..+..... ..............+ .
T Consensus 144 --~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 212 (254)
T 3kzv_A 144 --FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------N 212 (254)
T ss_dssp --SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------T
T ss_pred --CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------c
Confidence 2234579999999999999988775 89999999999988743210 011222222221111 1
Q ss_pred EecccHHHHHHHHHHHHhcC----CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG----VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~----~~~~~~ni~~~~~ 261 (684)
..+...+|+|++++.++... ..|+.+++.+++.
T Consensus 213 ~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 213 NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp C----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred CCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence 24567899999999998765 3578888876653
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=169.22 Aligned_cols=222 Identities=18% Similarity=0.105 Sum_probs=154.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
|+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ....++.++.+|+.|.+++.+++..
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDA--TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 899999999742 11111000 0124678899999999988877642
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+...
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 146 (256)
T 1geg_A 77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------- 146 (256)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC----------
Confidence 2799999999975422 122345568899999998888777542 214799999997654221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH-----------HHHHHHHcCCceEE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP-----------KFILLAMKGQQLPI 221 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~ 221 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||++.++... .... ..........
T Consensus 147 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---- 216 (256)
T 1geg_A 147 ----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA--EIDRQVSEAAGKPLGYGTAEFAKRI---- 216 (256)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH--HHHHHHHHHHTCCTTHHHHHHHTTC----
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh--hhhhhccccccCChHHHHHHHHhcC----
Confidence 12357999999999999888765 4899999999999876310 0100 0011111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
....+.+.+|+|+++..++..+ ..++.+++.+|..
T Consensus 217 -----p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 217 -----TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp -----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred -----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 1124689999999999998653 3678899987743
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-18 Score=169.14 Aligned_cols=224 Identities=15% Similarity=0.096 Sum_probs=158.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++..
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGD--AADAAATK-IGCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-cCCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 34588999999999999999999999 899999999642 11111110 134688999999999988777643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~------------ 168 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVA------------ 168 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC------------
Confidence 2899999999976432 23345667889999999999888753 33 579999999766432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC------CCc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN------GSN 227 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 227 (684)
..+...|+.+|...+.+.+.++.+ +++++.+++||.++++.. ... .....-..... ...
T Consensus 169 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~------~~~----~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3gvc_A 169 --VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ------QTA----MAMFDGALGAGGARSMIARL 236 (277)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HHH----HTCC------CCHHHHHHHH
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH------HHh----hhcchhhHHHHhhhhhhhcc
Confidence 223457999999999999888766 589999999999987621 000 00000000000 000
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
...+...+|+|++++.++... ..++.+++.+|...+
T Consensus 237 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 237 QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 124678999999999999643 367899998876543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=169.67 Aligned_cols=223 Identities=14% Similarity=0.055 Sum_probs=149.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC--CCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--GIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 89 (684)
||+||||||+|+||+++++.|+++ |++|++++|+... ... . +.+|+.|.+++..++... ++|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~--~~~----------~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE--VIA----------D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS--EEC----------C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchh--hcc----------c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 368999999999999999999999 8999999997421 110 1 568999999998888543 6799
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC-----C------
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN-----P------ 154 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~-----~------ 154 (684)
|||+||.... ....+..+++|+.++.++++++. +.+ ..++|++||...+........... +
T Consensus 66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (257)
T 1fjh_A 66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141 (257)
T ss_dssp EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence 9999997541 24578899999999999999886 333 589999999988732111100000 0
Q ss_pred ---CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 155 ---EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 155 ---e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
+..+..+...|+.+|...+.+.+.++.+ .++++++++||.+.++..... ............ + .. ..
T Consensus 142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~--~---~~--~~ 213 (257)
T 1fjh_A 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG-LQDPRYGESIAK--F---VP--PM 213 (257)
T ss_dssp HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C---CC--ST
T ss_pred hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh-ccchhHHHHHHh--c---cc--cc
Confidence 0012224468999999999999887765 589999999999988743110 000000000000 0 00 11
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+.+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~ 249 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 24688999999999998753 3578899887743
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-18 Score=167.77 Aligned_cols=222 Identities=14% Similarity=0.138 Sum_probs=156.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. ......+.++.+|+.|.+++..++..
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLE--EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999742 1111100 00124578899999999988877642
Q ss_pred ----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCccc-ccCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEV-YGETDMESDI 151 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~v-yg~~~~~~~~ 151 (684)
.++|+|||+||...... ..++....+++|+.++.++++++. +.+ ..++|++||..+ +.
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-------- 164 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV-------- 164 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC--------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc--------
Confidence 27999999999764321 223445688999999999988774 333 689999999763 21
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCC
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 226 (684)
+..+...|+.+|...+.+.+.++.+ +++++++++||++.++... ... +..........+
T Consensus 165 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p-------- 228 (267)
T 1vl8_A 165 ------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE--AVFSDPEKLDYMLKRIP-------- 228 (267)
T ss_dssp ------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH--HHHTCHHHHHHHHHTCT--------
T ss_pred ------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc--ccccChHHHHHHHhhCC--------
Confidence 1123457999999999999888766 4899999999999876421 111 112222222211
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+...+|+|++++.++... ..++.+.+.+|.
T Consensus 229 -~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 229 -LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp -TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence 113678899999999998653 357888888764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-19 Score=173.24 Aligned_cols=186 Identities=10% Similarity=0.006 Sum_probs=130.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCC--eE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGI--AF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~--~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
.|+||||||+|+||++++++|+++|+ +| .++.+|++|.+++.++++++ |+|||+||..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGH--DVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSC--SEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCC--CEEEECCCcc
Confidence 46899999999999999999999999 77 34568899999998888765 9999999954
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
. ........+++|+.++.+++++|.+.++ ++|++||..+|+ + +.+.|+.+|..
T Consensus 96 ---~---~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-----~---------------~~~~Y~~sK~~ 149 (242)
T 2bka_A 96 ---R---GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-----S---------------SNFLYLQVKGE 149 (242)
T ss_dssp ---H---HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-----T---------------CSSHHHHHHHH
T ss_pred ---c---ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-----C---------------CcchHHHHHHH
Confidence 1 1234567899999999999999999876 699999998874 1 33689999999
Q ss_pred HhhhhhHHhhhh-hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc-CCCccchhhHHH
Q 035631 510 VTFLSYLEIFVL-VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI-PNSMTVLDEMLP 587 (684)
Q Consensus 510 ~E~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~~~ 587 (684)
+|.+.... .. .+.+.|+..+++++...... .++...+........ ...++|++|+|+
T Consensus 150 ~e~~~~~~--~~~~~~~vrpg~v~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~dva~ 208 (242)
T 2bka_A 150 VEAKVEEL--KFDRYSVFRPGVLLCDRQESRPG-------------------EWLVRKFFGSLPDSWASGHSVPVVTVVR 208 (242)
T ss_dssp HHHHHHTT--CCSEEEEEECCEEECTTGGGSHH-------------------HHHHHHHHCSCCTTGGGGTEEEHHHHHH
T ss_pred HHHHHHhc--CCCCeEEEcCceecCCCCCCcHH-------------------HHHHHHhhcccCccccCCcccCHHHHHH
Confidence 98775432 33 35556666554332111000 010000000000000 113499999999
Q ss_pred HHHHHHhcCc-cceeEecC
Q 035631 588 IAIEMARRNC-RGAWNFTN 605 (684)
Q Consensus 588 ~~~~~~~~~~-~g~~ni~~ 605 (684)
+++.+++++. .|.|++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 209 AMLNNVVRPRDKQMELLEN 227 (242)
T ss_dssp HHHHHHTSCCCSSEEEEEH
T ss_pred HHHHHHhCccccCeeEeeH
Confidence 9999998774 46666644
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=163.87 Aligned_cols=206 Identities=15% Similarity=0.124 Sum_probs=153.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
.|+++||||||+|+||+++++.|+++ |++|++++|+... .....+.+|+.|.+++..++..
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~------------~~~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENP------------NADHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCT------------TSSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccc------------ccccceEEEeCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 8999999997521 1124578899999988777643
Q ss_pred CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|+|||+||.... ....++....+++|+.++.++++++...- ...++|++||...+..
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------- 151 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-------------- 151 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--------------
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC--------------
Confidence 268999999997532 22234456788999999999999987642 1258999999877532
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|...+.+.+.++.+ .++++.+++||+|.++. ....... .....++.
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----------~~~~~~~---------~~~~~~~~ 212 (251)
T 3orf_A 152 TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----------NRKYMSD---------ANFDDWTP 212 (251)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----------HHHHCTT---------SCGGGSBC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----------hhhhccc---------ccccccCC
Confidence 223457999999999999998877 47899999999987642 1111111 12235788
Q ss_pred HHHHHHHHHHHHhc---C-CCCcEEEecCCCcc
Q 035631 234 CADVAEAFDVILHR---G-VIGHVYNVGTKKER 262 (684)
Q Consensus 234 ~~D~a~~i~~~~~~---~-~~~~~~ni~~~~~~ 262 (684)
.+|+|++++.++.. . ..|+.+++..++..
T Consensus 213 ~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 213 LSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp HHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred HHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence 99999999999976 2 35788998776543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=165.20 Aligned_cols=230 Identities=12% Similarity=0.089 Sum_probs=155.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|+++.+............ .....++.++.+|+.|.+++..+++.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999844322111100000 01234688999999999998877643
Q ss_pred --CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 150 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG------------ 150 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC------------
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC------------
Confidence 279999999996522 11223346788999999999999997652 1248999999877611
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChH-HHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYG--LPTITTRGNNVYGPNQFPEKLI-PKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
+..+...|+.+|...+.+.+.++.+.+ +++..++||.+..+... .+. +...... ........+.+
T Consensus 151 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~--~~~~~~~~~~~---------~~~~p~~r~~~ 218 (259)
T 3edm_A 151 -GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD--TFTKPEVRERV---------AGATSLKREGS 218 (259)
T ss_dssp -CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------CCBC
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccc--cccChHHHHHH---------HhcCCCCCCcC
Confidence 112345799999999999998887753 88899999999876421 111 1111111 11112235678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCccCH
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKERSV 264 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~ 264 (684)
.+|+|++++.++... ..|+.+++.+|...+.
T Consensus 219 pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 219 SEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred HHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 999999999998653 3688999988765443
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=170.25 Aligned_cols=223 Identities=13% Similarity=0.095 Sum_probs=157.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||++++++|+++ |++|++++|+.... ...+.. .....++.++.+|+.|.+++.+++..
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEV-ADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 89999999953211 111100 01234688999999999988877643
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||..... ...++....+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--------- 172 (271)
T 4iin_A 103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERG--------- 172 (271)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC---------
T ss_pred HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCC---------
Confidence 2899999999976532 22344567889999999988887743 33 589999999776532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
..+...|+.+|...+.+.+.++.+ .++++..++||.+..+... ......... .........
T Consensus 173 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~---------~~~~~~~~~ 236 (271)
T 4iin_A 173 -----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA--NLKDELKAD---------YVKNIPLNR 236 (271)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------------CGGGCTTCS
T ss_pred -----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh--hhcHHHHHH---------HHhcCCcCC
Confidence 223467999999999999888776 5889999999999876421 111111100 111112235
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+...+|+|+++..++... ..|+.+++.+|-
T Consensus 237 ~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 237 LGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 788999999999998653 367899998774
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=170.46 Aligned_cols=226 Identities=12% Similarity=0.085 Sum_probs=158.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
.+++||||||+|+||++++++|+++ |++|++++++.......... ......++.++.+|+.|.+++..++..
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999 89999998543211111000 011235789999999999988877643
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||...... ..++....+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 169 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGA----------- 169 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----------
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCC-----------
Confidence 28999999999764322 2334566889999999999888743 33 5799999997765321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.+...|+.+|...+.+.+.++.++ ++++..++||.+..+... ....... ... .........+..
T Consensus 170 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~----~~~----~~~~~~~~~~~~ 236 (269)
T 3gk3_A 170 ---FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE--AVPQDVL----EAK----ILPQIPVGRLGR 236 (269)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT--C-----------CC----SGGGCTTSSCBC
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhh--hhchhHH----HHH----hhhcCCcCCccC
Confidence 234579999999999998887663 799999999999877432 1111110 000 001111235678
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.+|+|++++.++... ..++.+++.+|..++
T Consensus 237 p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 237 PDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp HHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred HHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 999999999998754 357899999886543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-18 Score=173.36 Aligned_cols=216 Identities=14% Similarity=0.068 Sum_probs=148.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. ......+.++.+|+.|.+++.+++..
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPA--LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999 8999999997421 111110 01134688999999999998877643
Q ss_pred --CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||.... ....++....+++|+.++.++++++.. .+...++|++||...+..
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 174 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP---------- 174 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC----------
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----------
Confidence 289999999997643 223345567889999999999998743 232479999999876532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHH-----HHcCCceEEecCCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILL-----AMKGQQLPIHGNGS 226 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 226 (684)
..+...|+.+|...+.+.+.++.+. +++++.++||.|..+. ....... .....+...++...
T Consensus 175 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
T 3tjr_A 175 ----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL------VSNSERIRGADYGMSATPEGAFGPLP 244 (301)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH------HHHHHHHC------------------
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc------ccccccccchhhccccChhhhccccc
Confidence 2234579999999999998887664 7999999999987652 1111100 00111111122222
Q ss_pred ceEecccHHHHHHHHHHHHhcCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
....+++++|+|++++.++..+.
T Consensus 245 ~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 245 TQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred cccCCCCHHHHHHHHHHHHhcCC
Confidence 34568999999999999998754
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=172.57 Aligned_cols=226 Identities=16% Similarity=0.089 Sum_probs=159.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... ....... ....++.++.+|+.|.+++..+++.
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSE--LDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 8999999996421 1111000 0134688999999999888777642
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+||..... ...+++...+++|+.++.++++++... +...++|++||...+..
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 164 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--------- 164 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC---------
Confidence 2899999999976532 223345568899999999998887532 22369999999877532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|..+...................+ ...
T Consensus 165 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r 230 (266)
T 4egf_A 165 -----LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP---------LGR 230 (266)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT---------TSS
T ss_pred -----CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC---------CCC
Confidence 223457999999999999888776 489999999999987631000000111222222221 124
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
+...+|+|++++.++... ..++.+++.+|..+
T Consensus 231 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 578999999999998653 36789999887543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=167.35 Aligned_cols=199 Identities=13% Similarity=0.069 Sum_probs=147.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCC---cEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPD---YEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
.+.+++||||||+|+||++++++|+++ | ++|++++|+..... ...+.. ...++.++.+|+.|.+.+..++..
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~ 93 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLVAD 93 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhc--cCCceEEEEecCCChHHHHHHHHH
Confidence 445689999999999999999999999 7 99999999753211 111100 124688999999999888777642
Q ss_pred C-------CCCEEEEcCccCC-----cCCCCCChHHHHHHHHHHHHHHHHHHHhc----------CC----CcEEEEEeC
Q 035631 85 E-------GIDTIMHFAAQTH-----VDNSFGNSFEFTNNNIYGTHVLLEACKLT----------GQ----VKRFIHVST 138 (684)
Q Consensus 85 ~-------~~d~Vih~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~----~~~~i~~SS 138 (684)
. ++|+|||+||... .....++....+++|+.++.++++++... +. ..+||++||
T Consensus 94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS 173 (267)
T 1sny_A 94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 173 (267)
T ss_dssp HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence 2 7999999999765 12223445568899999999999988643 10 378999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc
Q 035631 139 DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK 215 (684)
Q Consensus 139 ~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 215 (684)
...+.... +..+...|+.+|...|.+++.++.+ ++++++++|||+|..+....
T Consensus 174 ~~~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------- 229 (267)
T 1sny_A 174 ILGSIQGN-----------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------- 229 (267)
T ss_dssp GGGCSTTC-----------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------
T ss_pred ccccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------
Confidence 87764321 1124567999999999999888766 58999999999997653210
Q ss_pred CCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 216 GQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
..++..+|+|+.++.++...
T Consensus 230 -------------~~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 230 -------------SAPLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp -------------TCSBCHHHHHHHHHHHHHHC
T ss_pred -------------CCCCCHHHHHHHHHHHHHhc
Confidence 02367899999999999753
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.9e-18 Score=167.37 Aligned_cols=227 Identities=13% Similarity=0.082 Sum_probs=159.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 85 (684)
.+.++++|||||+|+||++++++|+++ |++|++++++... ....+.. .....++.++.+|+.|.+++.+++...
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTK-DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 8999998775321 1111100 012356889999999999988777432
Q ss_pred ----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
++|++||+||...... ..+++...+++|+.++.++++++...- ...++|++||.....
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------- 158 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD------------- 158 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-------------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-------------
Confidence 7999999999764322 334566788999999999999987642 135999999965210
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC----------CChHHHHHHHHHcCCceEEec
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP----------EKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.+..+...|+.+|...+.+.+.++.+ +++++..++||.+..+.... ...............+
T Consensus 159 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 233 (270)
T 3is3_A 159 FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP----- 233 (270)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST-----
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC-----
Confidence 12234567999999999999988776 48999999999998764210 0011112222221111
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 234 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 234 ----LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp ----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred ----CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 124577999999999998643 367899998763
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=167.10 Aligned_cols=226 Identities=14% Similarity=0.049 Sum_probs=163.0
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+| +||+++++.|+++ |++|++++|+..... ...+. .....+.++.+|+.|.+++..++..
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLA--ESLGVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHH--HHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHH--HhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 3458999999998 9999999999999 899999999742111 11110 0113467899999999998887743
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|++||+||.... ..+.+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-------- 175 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-------- 175 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC--------
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC--------
Confidence 279999999997642 23344566789999999999999997642 1369999999776532
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|...+.+.+.++.++ ++++..++||.|..+...................++ .
T Consensus 176 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 240 (296)
T 3k31_A 176 ------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------R 240 (296)
T ss_dssp ------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------S
T ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------C
Confidence 2234679999999999998887664 799999999999987542211122222322222221 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
.+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 3567899999999999742 46789999887543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-18 Score=177.69 Aligned_cols=239 Identities=15% Similarity=0.118 Sum_probs=167.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc--------cccccCCC--CCCCCCceEEEecCCCHHHH
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHP--SRASPNFKFLKGDITCADLM 78 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--------~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~ 78 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+... .....+.. ......+.++.+|+.|.+++
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 101 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA 101 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 344688999999999999999999999 8999999986210 00000000 01124578889999999998
Q ss_pred HHhhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC---------CCcEEEEEeCcc
Q 035631 79 NYLLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG---------QVKRFIHVSTDE 140 (684)
Q Consensus 79 ~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~~i~~SS~~ 140 (684)
..++.. .++|+|||+||..... ...+++...+++|+.++.++++++...- .-.+||++||..
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~ 181 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA 181 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence 877643 2899999999976532 2334566788999999999998875321 015999999977
Q ss_pred cccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC
Q 035631 141 VYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQ 217 (684)
Q Consensus 141 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~ 217 (684)
.+... .+...|+.+|...+.+.+.++.+ +++++..++|| +..+... .......
T Consensus 182 ~~~~~--------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~--~~~~~~~------- 237 (322)
T 3qlj_A 182 GLQGS--------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTE--TVFAEMM------- 237 (322)
T ss_dssp HHHCB--------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSC--CSCCC---------
T ss_pred HccCC--------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccch--hhhhhhh-------
Confidence 65321 12357999999999999988877 58999999999 6544221 1100000
Q ss_pred ceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc-----------------CHHHHHHHHHHHhCC
Q 035631 218 QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER-----------------SVLDVAADICTLFKL 277 (684)
Q Consensus 218 ~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~-----------------t~~e~~~~i~~~~g~ 277 (684)
......+.++..+|+|++++.++... ..|+.+++.+|... ++.|+++.+.+.+|.
T Consensus 238 -----~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 312 (322)
T 3qlj_A 238 -----ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK 312 (322)
T ss_dssp -----------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred -----hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence 01112234578899999999998643 36789999887654 779999999998875
Q ss_pred C
Q 035631 278 E 278 (684)
Q Consensus 278 ~ 278 (684)
+
T Consensus 313 ~ 313 (322)
T 3qlj_A 313 A 313 (322)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-18 Score=170.61 Aligned_cols=208 Identities=16% Similarity=0.056 Sum_probs=148.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHh-cCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIK-NYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
.+++||||||+|+||+++++.|++ . |++|++++|+..... ...+.. ...++.++.+|+.|.+.+..++...
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQA--EGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHh--cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 457999999999999999999999 8 899999999642111 011110 1246889999999999888777422
Q ss_pred ---CCCEEEEcCccCCcCCC----CCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCC-CC-------
Q 035631 86 ---GIDTIMHFAAQTHVDNS----FGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDM-ES------- 149 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~-~~------- 149 (684)
++|+|||+||....... .++....+++|+.++.++++++.... ...+||++||...+..... .+
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~ 158 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence 89999999997643222 13345678999999999999998752 1259999999877632100 00
Q ss_pred CCCCCC-------------------CCCCCCCChhHHHHHHHHHHHHHHHHh-------cCCCEEEEeeCceeCCCCCCC
Q 035631 150 DIGNPE-------------------ASQLLPTNPYSATKAGAEMLVMAYHRS-------YGLPTITTRGNNVYGPNQFPE 203 (684)
Q Consensus 150 ~~~~~e-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~G~~~~~~ 203 (684)
.....| ..+..|...|+.+|.+.|.+++.++.+ .++++++++||+|.++....
T Consensus 159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~- 237 (276)
T 1wma_A 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP- 237 (276)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence 000001 112234578999999999998887665 48999999999998764311
Q ss_pred ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 204 KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
..+.+.+|+|++++.++..+
T Consensus 238 -------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 -------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp -------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred -------------------------cccCChhHhhhhHhhhhcCc
Confidence 13578999999999999744
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=175.66 Aligned_cols=225 Identities=11% Similarity=0.056 Sum_probs=143.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+........+.++.+|+.|.+++..++..
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999742111 01111111122688999999999988877643
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC---------CCcEEEEEeCcccccCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG---------QVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~~i~~SS~~vyg~~~~~ 148 (684)
.++|+|||+||..... ...++....+++|+.++.++++++.... ...+||++||...+...
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~--- 159 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA--- 159 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---
Confidence 3789999999975432 2234456788999999999998886431 14689999998776432
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC-
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN- 224 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (684)
.....|+.||...+.+.+.++.+ .++++++++||.|.++........+..+..............
T Consensus 160 -----------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (319)
T 3ioy_A 160 -----------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL 228 (319)
T ss_dssp -----------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH
Confidence 12357999999777776666544 489999999999988743221111111111000000000000
Q ss_pred CCceEecccHHHHHHHHHHHHhcCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
.......+..+|+|++++.+++.+.
T Consensus 229 ~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 229 AGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 0111122789999999999998643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.3e-18 Score=169.16 Aligned_cols=214 Identities=19% Similarity=0.152 Sum_probs=147.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+........+.++.+|+.|.+++..++..
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999642111 00111111123578889999999998877642
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHH----HHHHHHHHHhcCC-CcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYG----THVLLEACKLTGQ-VKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~----~~~ll~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|+|||+||...... ..+++...+++|+.+ +++++.++++.+. ..+||++||...+...
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~------- 179 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------- 179 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC-------
Confidence 27999999999754322 223455688999999 7777777777651 2799999998876321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCceEEecCC
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+..+...|+.+|...+.+.+.++.+ .++++++++|+.+.++... .......+ ...
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~------------ 241 (279)
T 1xg5_A 180 -----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA-AAT------------ 241 (279)
T ss_dssp -----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH-HHH------------
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH-hhh------------
Confidence 2223457999999999988877654 4799999999999876310 00000000 000
Q ss_pred CceEecccHHHHHHHHHHHHhcCC
Q 035631 226 SNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
.....+++.+|+|++++.++..+.
T Consensus 242 ~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 242 YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HC---CBCHHHHHHHHHHHHHSCT
T ss_pred cccccCCCHHHHHHHHHHHhcCCc
Confidence 011246889999999999998654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.8e-19 Score=175.33 Aligned_cols=223 Identities=15% Similarity=0.032 Sum_probs=144.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
++++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+||
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv 84 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLV 84 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 3589999999999999999999999976 56778999999999888765 689999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhh----HHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGT----LTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~----~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...+.....+++|+.++ +.++..+++.+. ++|++||...+. +..
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~- 146 (281)
T 3m1a_A 85 NNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------------SFA- 146 (281)
T ss_dssp ECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------------CCT-
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------------CCC-
Confidence 9999762111 1334456678899999994 445555555554 799999986552 122
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+.+.|+.||...|.+..... .+..+...++..+.+..... . .... ......+...........
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------~--~~~~--~~~~~~~~~~~~~~~~~~ 214 (281)
T 3m1a_A 147 GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK--------G--AAYF--SEENPAYAEKVGPTRQLV 214 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC--------C--CEEE--CCBCTTTHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc--------c--cccc--CCcchhhHHHhHHHHHHH
Confidence 56789999999998843322 22334444443222111000 0 0000 000112222111111111
Q ss_pred --ccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcC
Q 035631 574 --NIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYID 623 (684)
Q Consensus 574 --~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 623 (684)
.....+.+++|+|++++.+++++ .++.|+++++....+.+.+..+.+.++
T Consensus 215 ~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 215 QGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 11225699999999999999887 556899999877777888877776654
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=161.89 Aligned_cols=205 Identities=13% Similarity=0.118 Sum_probs=149.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc------
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS------ 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+.... .....++.+|+.|.+++..++..
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCcccc----------ccccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999 89999999974210 12356778999999888776642
Q ss_pred -CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------- 136 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------- 136 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------------
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-------------
Confidence 3899999999975422 1223456788999999999999987631 1259999999877632
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY-----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|...+.+.+.++.+. ++++++++||++.++. ........ ....++
T Consensus 137 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~----------~~~~~~~~---------~~~~~~ 196 (236)
T 1ooe_A 137 -TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM----------NRKWMPNA---------DHSSWT 196 (236)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH----------HHHHSTTC---------CGGGCB
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc----------hhhcCCCc---------cccccC
Confidence 2234579999999999999988765 4899999999987652 11110110 112356
Q ss_pred cHHHHHHHHHHHHhc----CCCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHR----GVIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~----~~~~~~~ni~~~~ 260 (684)
..+|+|++++.++.. ...++.+++.++.
T Consensus 197 ~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 197 PLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp CHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred CHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 789999999866632 2357788886654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-17 Score=165.12 Aligned_cols=231 Identities=17% Similarity=0.134 Sum_probs=160.4
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC------------CCCCCCceEEEecCCCH
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP------------SRASPNFKFLKGDITCA 75 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~------------~~~~~~~~~~~~Dl~d~ 75 (684)
..+.+++||||||+|+||+++++.|+++ |++|++++|+........... ......+.++.+|+.|.
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL 119 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 3445689999999999999999999999 899999988632111100000 01234688999999999
Q ss_pred HHHHHhhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccc
Q 035631 76 DLMNYLLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVY 142 (684)
Q Consensus 76 ~~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vy 142 (684)
+++..++.. .++|+|||+||..... ...+++...+++|+.++.++++++.. .+...+||++||...+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~ 199 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL 199 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence 998877643 2899999999976532 23344567889999999999988743 2224789999998765
Q ss_pred cCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHH----------
Q 035631 143 GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKF---------- 209 (684)
Q Consensus 143 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~---------- 209 (684)
... .+...|+.+|...+.+.+.++.++ ++++..++||+|.++..........+
T Consensus 200 ~~~--------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 265 (317)
T 3oec_A 200 RGA--------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRE 265 (317)
T ss_dssp SCC--------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHH
T ss_pred CCC--------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchh
Confidence 321 224579999999999999888774 89999999999987632100000000
Q ss_pred -HHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 210 -ILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
........ ......+++++|+|++++.++... ..|+++++.+|..
T Consensus 266 ~~~~~~~~~-------~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 266 DAAELFSQL-------TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp HHHHHHTTT-------CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhhh-------ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 00000000 011146789999999999998643 3678999988754
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=168.32 Aligned_cols=225 Identities=13% Similarity=0.029 Sum_probs=160.0
Q ss_pred CCCCEEEEEcCCch--hHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGF--IGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~--iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+++||||||+|+ ||+++++.|+++ |++|++++|+.... ....+.. ....+.++.+|+.|.+++..++..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAE--ELGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHH--HHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHH--hcCCceEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999 999999999999 89999999863211 0111110 113578899999999998877643
Q ss_pred ---CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|++||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+..
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-------- 176 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-------- 176 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB--------
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC--------
Confidence 279999999997641 23334566788999999999999987532 1369999999876532
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|...+.+.+.++.+ +++++..++||.+..+...................+. .
T Consensus 177 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 241 (293)
T 3grk_A 177 ------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------R 241 (293)
T ss_dssp ------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------S
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------C
Confidence 123467999999999999888776 3899999999999887432112222333332222211 2
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.+...+|+|++++.++... ..++.+++.+|..
T Consensus 242 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence 3567899999999998643 4678999988754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=165.03 Aligned_cols=205 Identities=14% Similarity=0.082 Sum_probs=145.3
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
|+.+.+++||||||+|+||++++++|+++ |++|++++|+... ...+.. ......+.++.+|+.|.+++..++..
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEK--LRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 44455689999999999999999999999 8999999997421 111110 01134688999999999998877643
Q ss_pred -----CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
.++|+|||+||.... ....++....+++|+.++.++++++.. .+ ..+||++||...+..
T Consensus 100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~------ 172 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNP------ 172 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCC------
T ss_pred HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCC------
Confidence 379999999997321 223344567889999999999988743 33 689999999776522
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
..+...|+.+|+..+.+.+.++.+ .++++..++||.+..+... .. ... ..
T Consensus 173 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~--------~~~---------~~ 225 (262)
T 3rkr_A 173 --------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV--GL--------SAK---------KS 225 (262)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc--cc--------ccc---------cc
Confidence 233467999999999999888766 4899999999998765321 00 000 01
Q ss_pred eEecccHHHHHHHHHHHHhcCC
Q 035631 228 VRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
...++..+|+|+++..++....
T Consensus 226 ~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 226 ALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp ---CCCHHHHHHHHHHHHTCCT
T ss_pred cccCCCHHHHHHHHHHHhcCcc
Confidence 2346789999999999997654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=171.39 Aligned_cols=201 Identities=13% Similarity=-0.001 Sum_probs=147.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+.+..++..
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHG--LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHH--HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 355689999999999999999999999 8999999996421 111100 00124688999999999988777642
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||...... ..++....+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------- 174 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV-------- 174 (272)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH--------
T ss_pred HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC--------
Confidence 27999999999764322 123445688999999887777664 344 6899999998776421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc------CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY------GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.+...|+.+|...|.+++.++.+. +++++++||+++.++.... .. ..
T Consensus 175 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-~~--------------------~~ 227 (272)
T 1yb1_A 175 ------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-PS--------------------TS 227 (272)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-TH--------------------HH
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-cc--------------------cc
Confidence 123569999999999998887664 7999999999998874311 00 00
Q ss_pred eEecccHHHHHHHHHHHHhcCC
Q 035631 228 VRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
...+++.+|+|++++.++..+.
T Consensus 228 ~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 228 LGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHHHHHHcCC
Confidence 1246889999999999998654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=166.41 Aligned_cols=233 Identities=16% Similarity=0.061 Sum_probs=160.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcc-----------cccccCCC--CCCCCCceEEEecCCCHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-----------SSLKNLHP--SRASPNFKFLKGDITCAD 76 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----------~~~~~l~~--~~~~~~~~~~~~Dl~d~~ 76 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+... ........ ......+.++.+|+.|.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 34689999999999999999999999 8999999985211 11100000 012346888999999999
Q ss_pred HHHHhhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCccccc
Q 035631 77 LMNYLLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYG 143 (684)
Q Consensus 77 ~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg 143 (684)
++..++.. .++|++||+||..... .+.+++...+++|+.++.++++++.. .+...++|++||...+.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 98877643 3799999999976542 23345667889999999999888643 22246999999987653
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCce-
Q 035631 144 ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQL- 219 (684)
Q Consensus 144 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~- 219 (684)
.. .....|+.+|...+.+.+.++.++ ++++..++||.+..+.... ................
T Consensus 167 ~~--------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~ 231 (277)
T 3tsc_A 167 MQ--------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG-DMVTAVGQAMETNPQLS 231 (277)
T ss_dssp CC--------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH-HHHHHHHHHHHTCGGGT
T ss_pred CC--------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc-hhhhhhhhcccccHHHH
Confidence 21 224579999999999999887764 7999999999998764311 1111111111111110
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...... ....+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 232 ~~~~~~-~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 232 HVLTPF-LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp TTTCCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhhhc-cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 001111 1124789999999999999653 367899998774
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.4e-18 Score=164.72 Aligned_cols=221 Identities=19% Similarity=0.242 Sum_probs=158.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+.++++|||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++..
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAE--GAKAAAAS-IGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHHH-HCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 899999999742 11111100 134678899999999998877643
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEA----CKLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||..... ...+++...+++|+.++.++.++ +++.+...++|++||...+...
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 147 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT---------- 147 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----------
Confidence 2799999999976432 23344567889999999999888 4444435799999997765322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.+..+... +......+.... .+ ...
T Consensus 148 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r 211 (247)
T 3rwb_A 148 ----PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKG 211 (247)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCS
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCC
Confidence 22457999999999999888776 5899999999999875211 001111111110 11 123
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+...+|+|+++..++... ..++.+++.+|-
T Consensus 212 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 212 KGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 467899999999998653 367899998764
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-17 Score=163.69 Aligned_cols=229 Identities=17% Similarity=0.099 Sum_probs=160.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc--------------ccccCCC--CCCCCCceEEEecCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--------------SLKNLHP--SRASPNFKFLKGDIT 73 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~l~~--~~~~~~~~~~~~Dl~ 73 (684)
+.++++|||||+|.||+++++.|+++ |++|++++|+.... ....+.. .....++.++.+|+.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 34689999999999999999999999 89999999863211 0000000 012346889999999
Q ss_pred CHHHHHHhhcc-----CCCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCc
Q 035631 74 CADLMNYLLVS-----EGIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTD 139 (684)
Q Consensus 74 d~~~~~~~~~~-----~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~ 139 (684)
|.+++..++.. .++|++||+||...... +.+++...+++|+.++.++++++... +...++|++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 99998877642 27999999999754322 33456678899999999999887532 224699999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH---------
Q 035631 140 EVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP--------- 207 (684)
Q Consensus 140 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~--------- 207 (684)
..+.. ......|+.+|...+.+.+.++.+ +++++..++||+|..+.........
T Consensus 167 ~~~~~--------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 232 (286)
T 3uve_A 167 GGLKA--------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENP 232 (286)
T ss_dssp GGTSC--------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC
T ss_pred hhccC--------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccccc
Confidence 76532 123457999999999999888776 4899999999999987542110000
Q ss_pred ---HHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 208 ---KFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 208 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
........... ....+.+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 233 ~~~~~~~~~~~~~~--------~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 233 GPDDMAPICQMFHT--------LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp CHHHHHHHHHTTCS--------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred chhhHHHHHHhhhc--------cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 00000011111 1135789999999999999643 36789999887543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=164.39 Aligned_cols=226 Identities=20% Similarity=0.161 Sum_probs=157.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ..++.++.+|+.|.+++..++..
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDES--GGRALEQE--LPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH--hcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999642 11111110 12478899999999998877643
Q ss_pred CCCCEEEEcCccCCcC-----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD-----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... + ..++|++||...+...
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 148 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ----------- 148 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC-----------
Confidence 2799999999975321 122335678899999999999888531 2 3799999997653211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC-----CCChHHHHHHHHHcCCceEEecCCCce
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF-----PEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|...+.+.+.++.+ +++++++++||+++++... ....... ........++
T Consensus 149 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~p~--------- 215 (270)
T 1yde_A 149 ---AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS-IREGMLAQPL--------- 215 (270)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHH-HHHHHHTSTT---------
T ss_pred ---CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHH-HHHHhhcCCC---------
Confidence 12357999999999999888765 5899999999999986310 0011111 1111111111
Q ss_pred EecccHHHHHHHHHHHHhcC--CCCcEEEecCCCccCHHH
Q 035631 229 RSYLYCADVAEAFDVILHRG--VIGHVYNVGTKKERSVLD 266 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~--~~~~~~ni~~~~~~t~~e 266 (684)
..+...+|+|+++..++... ..++.+++.+|..+....
T Consensus 216 ~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~ 255 (270)
T 1yde_A 216 GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC 255 (270)
T ss_dssp SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence 13578999999999888652 357899999887655433
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.2e-17 Score=165.49 Aligned_cols=224 Identities=12% Similarity=0.081 Sum_probs=158.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc---cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS---LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+..... ...+. ....++.++.+|+.|.+++..++..
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIK--KNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHH--HhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999 899999998742110 01111 1134688899999999988776642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+...
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------ 171 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------------ 171 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS------------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC------------
Confidence 3799999999976432 223455678999999999999999875 225799999997654221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC-------CC--ChHHHHHHHHHc--CCceEEec
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF-------PE--KLIPKFILLAMK--GQQLPIHG 223 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~-------~~--~~~~~~~~~~~~--~~~~~~~~ 223 (684)
..+...|+.+|...+.+.+.++.+ +++++++++||.+.++... +. ..-......... ..+
T Consensus 172 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 245 (283)
T 1g0o_A 172 -VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP----- 245 (283)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-----
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC-----
Confidence 112457999999999999888765 4899999999999876210 00 000111111111 111
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 246 ----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 ----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 124678999999999999753 357889988764
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-18 Score=161.39 Aligned_cols=183 Identities=10% Similarity=0.012 Sum_probs=130.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEee-------eeccCCChhHHHHHHHhc-CCCeEEEcceecCCCC-cccccc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEF-------GTGRLEDKNSLLDDMKRV-RPTHVLNAAGITGRPN-VDWCES 440 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~-------~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~-~~~~~~ 440 (684)
++||+|||||+|+||++++++|+ +|++|.. +.+|++|.++++++++.. ++|+|||+||...... .+...+
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 80 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPE 80 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHH
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHH
Confidence 35799999999999999999999 9999843 578999999999999874 5699999999652111 112234
Q ss_pred chhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHH
Q 035631 441 HRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLE 517 (684)
Q Consensus 441 ~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~ 517 (684)
.....+++|+.++.++++++... +.++|++||...+. +.. +...|+.+|...|.+....
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~-~~~~Y~~sK~~~~~~~~~~ 142 (202)
T 3d7l_A 81 KNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED-----------------PIV-QGASAAMANGAVTAFAKSA 142 (202)
T ss_dssp HHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS-----------------CCT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC-----------------CCC-ccHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999876 55799999986542 111 4578999999999874332
Q ss_pred h----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHH
Q 035631 518 I----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593 (684)
Q Consensus 518 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 593 (684)
. .+..+...++..+.+.... .++....+.+ ++++|+|++++.++
T Consensus 143 ~~e~~~gi~v~~v~pg~v~~~~~~---------------~~~~~~~~~~-----------------~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 143 AIEMPRGIRINTVSPNVLEESWDK---------------LEPFFEGFLP-----------------VPAAKVARAFEKSV 190 (202)
T ss_dssp TTSCSTTCEEEEEEECCBGGGHHH---------------HGGGSTTCCC-----------------BCHHHHHHHHHHHH
T ss_pred HHHccCCeEEEEEecCccCCchhh---------------hhhhccccCC-----------------CCHHHHHHHHHHhh
Confidence 2 2344445555544332210 0111123355 99999999999888
Q ss_pred hcCccc-eeEe
Q 035631 594 RRNCRG-AWNF 603 (684)
Q Consensus 594 ~~~~~g-~~ni 603 (684)
.+...| .||+
T Consensus 191 ~~~~~G~~~~v 201 (202)
T 3d7l_A 191 FGAQTGESYQV 201 (202)
T ss_dssp HSCCCSCEEEE
T ss_pred hccccCceEec
Confidence 655444 7876
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-18 Score=172.41 Aligned_cols=228 Identities=11% Similarity=0.049 Sum_probs=161.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
.+.++++|||||+|+||+++++.|+++ |++|++++|+..... ...+. .....++.++.+|+.|.+++..++..
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLA-GATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 355689999999999999999999999 899999999742110 00010 01134688999999999988777643
Q ss_pred ---CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||.... ....+++...+++|+.++.++.+++.. .+ ..++|++||...+...
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 171 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQ-------- 171 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTC--------
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC--------
Confidence 289999999996532 223345667889999999999998742 22 4799999997765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceE
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|...+.+.+.++.++ ++++..++||+|.++..... ..............++ .
T Consensus 172 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~ 236 (277)
T 4fc7_A 172 ------ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------Q 236 (277)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------S
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------C
Confidence 223579999999999998887764 89999999999987631000 0001222222222221 2
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.+...+|+|++++.++... ..|+.+++.+|..++
T Consensus 237 r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 237 RLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence 4578999999999999742 468899998875443
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=4e-17 Score=164.71 Aligned_cols=228 Identities=16% Similarity=0.116 Sum_probs=160.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc----------ccccCCC--CCCCCCceEEEecCCCHHHH
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS----------SLKNLHP--SRASPNFKFLKGDITCADLM 78 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~~~l~~--~~~~~~~~~~~~Dl~d~~~~ 78 (684)
.++++|||||+|.||+++++.|+++ |++|++++|+.... ....... .....++.++.+|+.|.+++
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4589999999999999999999999 89999999863211 0000000 01235688999999999998
Q ss_pred HHhhcc-----CCCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccC
Q 035631 79 NYLLVS-----EGIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 79 ~~~~~~-----~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~ 144 (684)
..++.. .++|+|||+||...... ..+++...+++|+.++.++++++... +...+||++||...+..
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 877642 37999999999764322 33445678899999999999887532 22579999999876532
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC------------hHHHH
Q 035631 145 TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEK------------LIPKF 209 (684)
Q Consensus 145 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~------------~~~~~ 209 (684)
......|+.+|...+.+.+.++.+. ++++..++||.|..+...... ....+
T Consensus 185 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 250 (299)
T 3t7c_A 185 --------------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF 250 (299)
T ss_dssp --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred --------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHH
Confidence 1234579999999999998887764 899999999999987532100 00010
Q ss_pred HHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCcc
Q 035631 210 ILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKER 262 (684)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~ 262 (684)
.......... . ..+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 251 ~~~~~~~~~~-------p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 251 QVASRQMHVL-------P-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHHHHHHSSS-------S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHhhhhccc-------C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 0000000000 1 24678999999999999653 36889999887543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=165.81 Aligned_cols=210 Identities=17% Similarity=0.129 Sum_probs=142.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
.+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++...
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLD--ALQETAAE-IGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 345688999999999999999999999 899999999642 11111110 1246889999999999988877432
Q ss_pred --CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHhc----C-CCcEEEEEeCcccccCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKLT----G-QVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 86 --~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
++|+|||+||.... ....+++...+++|+.++.++.+++... + +..++|++||...+..
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--------- 170 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP--------- 170 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC---------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC---------
Confidence 89999999997533 1233445678899999988888776532 2 1369999999766522
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|..+... ....... ... .......
T Consensus 171 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~-~~~---------~~~~~~~ 233 (272)
T 4dyv_A 171 -----RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ--KMKAGVP-QAD---------LSIKVEP 233 (272)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh--hhcccch-hhh---------hcccccC
Confidence 223467999999999999888776 4899999999999876321 1110000 000 0011234
Q ss_pred cccHHHHHHHHHHHHhcCC
Q 035631 231 YLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~ 249 (684)
+..++|+|++++.++..+.
T Consensus 234 ~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 234 VMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp --CHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHhCCCC
Confidence 6899999999999998754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.8e-17 Score=161.43 Aligned_cols=221 Identities=15% Similarity=0.115 Sum_probs=157.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++++... ....+.. ......+.++.+|+.|.+++.+++...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAE-RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 8999998765321 1111100 012346889999999999888776432
Q ss_pred --CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
++|+|||+||..... .+.+++...+++|+.++.++++++... ....++|++||....-. +
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-------------~ 173 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-------------P 173 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-------------C
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-------------C
Confidence 899999999975432 233456678899999999999998754 22479999998543211 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
..+...|+.+|...+.+.+.++.++ ++++..++||.|.++..... .... ......+. ..+...
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~---------~r~~~p 240 (271)
T 3v2g_A 174 WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAE----AQRERIAT---------GSYGEP 240 (271)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHH----HHHHTCTT---------SSCBCH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHH----HHHhcCCC---------CCCCCH
Confidence 2334679999999999998887764 89999999999998753211 1111 11222111 135678
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+|+|++++.++... ..|+.+++.+|.
T Consensus 241 edvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 241 QDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 99999999998542 467899998764
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=164.58 Aligned_cols=209 Identities=10% Similarity=0.044 Sum_probs=140.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+... ...+... ....++.++.+|+.|.+++..++..
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEK--LAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGG--GHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 35689999999999999999999999 8999999997421 1111100 1134688999999999998887743
Q ss_pred -CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||.... ....++....+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------- 148 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRG----------- 148 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCC-----------
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCC-----------
Confidence 279999999997643 22334456788999999998888773 334 579999999776532
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCE-EEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPT-ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
......|+.+|...+.+.+.++.+. ++++ .++.||.+..+... ...+...... ....... +
T Consensus 149 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~--~~~~~~~~~~---------~~~~~~~-~ 213 (252)
T 3h7a_A 149 ---GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR--ERREQMFGKD---------ALANPDL-L 213 (252)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------
T ss_pred ---CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh--ccchhhhhhh---------hhcCCcc-C
Confidence 1234579999999999998887664 7888 78999988765321 1111111100 1111123 7
Q ss_pred ccHHHHHHHHHHHHhcCC
Q 035631 232 LYCADVAEAFDVILHRGV 249 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~ 249 (684)
...+|+|++++.++..+.
T Consensus 214 ~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 214 MPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp CCHHHHHHHHHHHHHCCG
T ss_pred CCHHHHHHHHHHHHhCch
Confidence 899999999999998654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=166.07 Aligned_cols=224 Identities=16% Similarity=0.170 Sum_probs=159.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----CC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----EG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~ 86 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..+++. .+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAE--KGKALADE-LGNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999 899999999742 11111111 134688999999999998877643 37
Q ss_pred CCEEEEc-CccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCcccccCCCC
Q 035631 87 IDTIMHF-AAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLT---------GQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 87 ~d~Vih~-a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~i~~SS~~vyg~~~~ 147 (684)
+|+|||+ |+..... ...+++...+++|+.++.++++++... +...++|++||...+..
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--- 180 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG--- 180 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC---
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC---
Confidence 8999999 5543321 122235678899999999999887631 12469999999877632
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
..+...|+.+|.+.+.+.+.++.++ ++++..++||.|..+... ..............+..
T Consensus 181 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~---- 243 (281)
T 3ppi_A 181 -----------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME--SVGEEALAKFAANIPFP---- 243 (281)
T ss_dssp -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TTCHHHHHHHHHTCCSS----
T ss_pred -----------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh--cccHHHHHHHHhcCCCC----
Confidence 2234679999999999988887664 799999999999765211 11122233333322211
Q ss_pred CCceEecccHHHHHHHHHHHHhcCC-CCcEEEecCCCccC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGV-IGHVYNVGTKKERS 263 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~ni~~~~~~t 263 (684)
..+.+.+|+|++++.++.... .|+.+++.+|..++
T Consensus 244 ----~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 244 ----KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp ----SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred ----CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 256889999999999998643 67899998886553
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=165.54 Aligned_cols=231 Identities=14% Similarity=0.093 Sum_probs=158.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 87 (684)
.+++||||||+|+||++++++|+++ |++|++++|+..... ...+........+..+.+|+.+.+.+.++++.. ++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 4589999999999999999999999 899999999742111 011111111235678899999999988887544 79
Q ss_pred CEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 88 d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
|++||+||...... ..+++...+++|+.++.++.+++. +.+ ..++|++||...+.. .
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------------~ 151 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMP--------------S 151 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSC--------------C
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccC--------------C
Confidence 99999999765322 223445678999999777766653 344 579999999877532 2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCceEEecCCCc
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF---------PEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.+...|+.+|...+.+.+.++.+. ++++..++||.+..+... ................ .....
T Consensus 152 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 226 (267)
T 3t4x_A 152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTSI 226 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTCS
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCccc
Confidence 234679999999999999988775 688899999998765210 0000111111111000 00011
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
...+.+.+|+|++++.++... ..|+.+++.+|...+
T Consensus 227 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 227 IQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp SCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred ccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 235788999999999998643 367899999886554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=162.42 Aligned_cols=220 Identities=13% Similarity=0.135 Sum_probs=153.9
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecC--CCHHHHHHhh
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDI--TCADLMNYLL 82 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl--~d~~~~~~~~ 82 (684)
..+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. ......+.++.+|+ .|.+.+.+++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEE--KLRQVASHINEETGRQPQWFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHH
Confidence 3456789999999999999999999999 899999999742 1111110 00123678899999 8888877665
Q ss_pred cc-----CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCC
Q 035631 83 VS-----EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 83 ~~-----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~ 148 (684)
.. .++|+|||+||.... ....+++...+++|+.++.++++++ ++.+ ..++|++||...+..
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~---- 158 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQG---- 158 (252)
T ss_dssp HHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSC----
T ss_pred HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccC----
Confidence 32 279999999997432 1222334568899999999999988 3444 689999999776532
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG--LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
..+...|+.+|...+.+.+.++.+++ +++..+.||.+..+. ........
T Consensus 159 ----------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~----------~~~~~~~~--------- 209 (252)
T 3f1l_A 159 ----------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM----------RASAFPTE--------- 209 (252)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH----------HHHHCTTC---------
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch----------hhhhCCcc---------
Confidence 12345799999999999999988764 788889999875431 11111111
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccCHH
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERSVL 265 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t~~ 265 (684)
....+...+|+|.+++.++... ..++.+++.+|...++.
T Consensus 210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 1124577899999999998653 36789999988766554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=164.58 Aligned_cols=201 Identities=12% Similarity=0.060 Sum_probs=136.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 90 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999999999999876 34568999999999888743 679
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+|||+||.......+...+.....+++|+.++.++++++. +.+ .++|++||...+.+ .
T Consensus 91 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~ 153 (255)
T 1fmc_A 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------------N 153 (255)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------------C
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------------C
Confidence 9999999763222233455667899999999999999886 334 36999999876631 1
Q ss_pred CCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK 571 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 571 (684)
. +...|+.+|...|.+...... +..+...++..+.+......... .+........
T Consensus 154 ~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~------------------~~~~~~~~~~- 213 (255)
T 1fmc_A 154 I-NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP------------------EIEQKMLQHT- 213 (255)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH------------------HHHHHHHHTC-
T ss_pred C-CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh------------------HHHHHHHhcC-
Confidence 1 557899999999987433222 33344445544433221110000 1111111100
Q ss_pred ccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccH
Q 035631 572 VVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISH 611 (684)
Q Consensus 572 ~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~ 611 (684)
....+++++|+|++++.++... .+..||+++|..+|+
T Consensus 214 ---~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 214 ---PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp ---SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred ---CcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 0013489999999999999754 244999999887764
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=162.09 Aligned_cols=210 Identities=16% Similarity=0.088 Sum_probs=144.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+++++||||||+|+||+++++.|+++ |++|++++|+.. ....+... .....+.++.+|+.|.+++..++..
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVA--GAKILLGARRQA--RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999742 11111100 1134578889999999988877643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||..... ...+++...+++|+.++.++.+++.. .+ ..++|++||...+...
T Consensus 78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~--------- 147 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVV--------- 147 (264)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccC---------
Confidence 2799999999976432 23344567889999999988887743 33 5799999998765321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|...+.+.+.++.+. ++++..++||.|..+... ..... ........ ....+..
T Consensus 148 -----~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~--~~~~~--------~~~~~~~~--~~~~~~~ 210 (264)
T 3tfo_A 148 -----PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAG--TITHE--------ETMAAMDT--YRAIALQ 210 (264)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------------------CCC
T ss_pred -----CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccc--cccch--------hHHHHHHh--hhccCCC
Confidence 223579999999999999888775 788999999998765321 11000 00000000 0112468
Q ss_pred HHHHHHHHHHHHhcCCC
Q 035631 234 CADVAEAFDVILHRGVI 250 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~~ 250 (684)
.+|+|++++.++..+..
T Consensus 211 pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 211 PADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhcCCcc
Confidence 99999999999987653
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.3e-17 Score=160.90 Aligned_cols=228 Identities=14% Similarity=0.057 Sum_probs=157.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+.+++||||||+|+||++++++|+++ |++|+++.++........... ......+.++.+|+.|.+.+..++..
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 81 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999 899988644321111100000 01134678889999999887766532
Q ss_pred --------CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 --------EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 --------~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
..+|+|||+||...... ..+.....+++|+.++.++++++... ....++|++||...+...
T Consensus 82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~------ 155 (255)
T 3icc_A 82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL------ 155 (255)
T ss_dssp HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC------
T ss_pred HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC------
Confidence 23999999999754322 22334567899999999999998764 113689999998765321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|+..+.+.+.++.+. ++++..++||.+..+......--+.+........+ .
T Consensus 156 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~ 218 (255)
T 3icc_A 156 --------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------F 218 (255)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------T
T ss_pred --------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------c
Confidence 223579999999999998887763 89999999999988743211111111222222221 1
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+...+|+|+++..++... ..|+++++.+|..
T Consensus 219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 219 NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence 24578999999999988643 4678999987753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=163.67 Aligned_cols=229 Identities=13% Similarity=0.000 Sum_probs=158.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|.||+++++.|+++ |++|++++|+..... ...+.......++.++.+|+.|.+++..++..
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999742111 00111101123588999999999988777643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||..... ...+++...+++|+.++.++++++... ....++|++||...+..
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 152 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP----------- 152 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------
Confidence 2799999999976432 223445678899999999999988531 12578999999776532
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC------CC--ChHHHHHHHHHcCCceEEecC
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF------PE--KLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~------~~--~~~~~~~~~~~~~~~~~~~~~ 224 (684)
......|+.+|...+.+.+.++.++ ++++..++||.+.++... .. .-...+..........+
T Consensus 153 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 225 (265)
T 3lf2_A 153 ---EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP---- 225 (265)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT----
T ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC----
Confidence 1234579999999999998887764 799999999999875210 00 00111111111111111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+...+|+|++++.++... ..|+.+++.+|..
T Consensus 226 ---~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 226 ---LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred ---cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 124678999999999998643 3678899987743
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.5e-17 Score=157.92 Aligned_cols=205 Identities=14% Similarity=0.142 Sum_probs=150.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc------
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS------ 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 84 (684)
++|+||||||+|+||+++++.|+++ |++|++++|+.... .....++.+|+.|.+++..++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhc----------cCCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999 89999999974210 12356778999999988877643
Q ss_pred -CCCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|+|||+||...... ..++....+++|+.++.++++++...- ...++|++||...+...
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 141 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------ 141 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC------------
Confidence 37999999999754221 223345678999999999999987631 12699999998776321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY-----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.+...|+.+|...+.+.+.++.+. +++++.++||++-.+. ........ ....++
T Consensus 142 --~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~----------~~~~~~~~---------~~~~~~ 200 (241)
T 1dhr_A 142 --PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------NRKSMPEA---------DFSSWT 200 (241)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------HHHHSTTS---------CGGGSE
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc----------ccccCcch---------hhccCC
Confidence 234579999999999999887653 5899999999886541 11110111 112346
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+|+|+++..++... ..++.+.+.++.
T Consensus 201 ~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 201 PLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp EHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred CHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 7899999999998653 346788886544
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=159.65 Aligned_cols=201 Identities=11% Similarity=0.060 Sum_probs=143.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+++||||||+|+||++++++|+++ |++|++++|+.. ....+.... ..++.++.+|+.|.+++..++.. .
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQ--RLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999 899999999742 111111111 12588899999999988877643 2
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+...
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 142 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK-------------- 142 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC--------------
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC--------------
Confidence 799999999975432 233456678899999999888887432 112499999997664321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
.....|+.+|...+.+.+.++.+. ++++..++||.+-.+... ... . . ....+...+|
T Consensus 143 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~------~~~----~-~---------~~~~~~~ped 202 (235)
T 3l6e_A 143 ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD------NTD----H-V---------DPSGFMTPED 202 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------------CBCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh------ccC----C-C---------CCcCCCCHHH
Confidence 123579999999999999888764 788999999998765321 000 0 0 0115688999
Q ss_pred HHHHHHHHHhcCCC
Q 035631 237 VAEAFDVILHRGVI 250 (684)
Q Consensus 237 ~a~~i~~~~~~~~~ 250 (684)
+|++++.++..+..
T Consensus 203 vA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 203 AAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHTCCCSS
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999976543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=161.15 Aligned_cols=200 Identities=13% Similarity=0.053 Sum_probs=134.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEccee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGI 429 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~ 429 (684)
.|++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|+|||+||.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence 4689999999999999999999999977 34578999999999998864 47999999996
Q ss_pred cCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 430 TGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 430 ~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
..... .+...+.....+++|+.++.++++++... + .++|++||...|.+ .. +...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~-~~~~ 148 (244)
T 1cyd_A 87 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------------FP-NLIT 148 (244)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CT-TBHH
T ss_pred cCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----------------CC-Ccch
Confidence 62111 12234556788999999999999988764 3 47999999877641 11 4568
Q ss_pred hhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 503 YSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 503 Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
|+.+|...|.+..... .+..+...++..+.+......... ..++..+..+. ...
T Consensus 149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~~~~~~----~~~ 207 (244)
T 1cyd_A 149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-----------------PEFARKLKERH----PLR 207 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-----------------HHHHHHHHHHS----TTS
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-----------------HHHHHHHHhcC----Ccc
Confidence 9999999998843322 233444455554443322111000 01111111110 002
Q ss_pred CccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 578 SMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
.++|++|+|++++.+++.+ .+..+++.++..+
T Consensus 208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 208 KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA 243 (244)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence 3499999999999999754 2447888776543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=155.90 Aligned_cols=216 Identities=17% Similarity=0.103 Sum_probs=148.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----CC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-----GI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 87 (684)
|++|||||+|+||+++++.|+++ |++|++++|+.. ....+... ...++.++.+|+.|.+++..++... ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQE--RLQELKDE-LGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 57999999999999999999999 899999999642 11111110 0136888999999999988887532 79
Q ss_pred CEEEEcCccCC-c----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTH-V----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 88 d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
|+|||+||... . ..+.+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-------------- 140 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP-------------- 140 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccC--------------
Confidence 99999999752 1 22334566788999999999888875 334 589999999876532
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeC-CCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYG-PNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
..+...|+.+|...+.+.+.++.+. ++++..++||.+.| +... ..+ ..-.... . ... ....++..
T Consensus 141 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~-~~~-~~~~~~~---~--~~~----~~~~~~~p 209 (248)
T 3asu_A 141 YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-VRF-KGDDGKA---E--KTY----QNTVALTP 209 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh-hcc-cCchHHH---H--HHH----hccCCCCH
Confidence 1234579999999999999887764 79999999999985 4211 000 0000000 0 000 01134689
Q ss_pred HHHHHHHHHHHhcCC--CCcEEEecCC
Q 035631 235 ADVAEAFDVILHRGV--IGHVYNVGTK 259 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~--~~~~~ni~~~ 259 (684)
+|+|++++.++..+. .++.+.+...
T Consensus 210 ~dvA~~v~~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 210 EDVSEAVWWVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp HHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred HHHHHHHHHHhcCCccceeeEEEEccc
Confidence 999999999997642 4556666543
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.8e-17 Score=159.81 Aligned_cols=226 Identities=12% Similarity=0.017 Sum_probs=160.2
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhccC
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
+.+++||||||+ |+||++++++|+++ |++|++++|+........+... ....++.++.+|+.|.+++..++...
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 346899999999 99999999999999 8999999886432111111100 11346888999999999988776432
Q ss_pred -----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 86 -----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 86 -----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++|+|||+||...... ..+++...+++|+.++.++++++ ++.+ ..++|++||...+...
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~------- 167 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIAN------- 167 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccC-------
Confidence 7899999999765332 23345678899999999999888 3444 5799999997664321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSYG--LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
...+...|+.+|+..+.+.+.++.+++ +++..+.||.+..+... .............. ....
T Consensus 168 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~---------~~~r 231 (267)
T 3gdg_A 168 -----FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD--FVPKETQQLWHSMI---------PMGR 231 (267)
T ss_dssp -----SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG--GSCHHHHHHHHTTS---------TTSS
T ss_pred -----CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh--hCCHHHHHHHHhcC---------CCCC
Confidence 112345799999999999999988764 67889999999876431 11122222222222 1234
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+.+.+|+|++++.++... ..++.+++.+|..
T Consensus 232 ~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 232 DGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp CEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred CcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 577899999999998653 3578999987753
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=9e-17 Score=161.44 Aligned_cols=222 Identities=14% Similarity=0.066 Sum_probs=156.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCC----HHHHHHhh
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITC----ADLMNYLL 82 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d----~~~~~~~~ 82 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+.. .....+... ....++.++.+|+.| .+.+..++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSA-EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCH-HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCch-HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 45689999999999999999999999 899999999741 111111000 113468899999999 88877766
Q ss_pred cc-----CCCCEEEEcCccCCcCCC--------------CCChHHHHHHHHHHHHHHHHHHHhcC---C------CcEEE
Q 035631 83 VS-----EGIDTIMHFAAQTHVDNS--------------FGNSFEFTNNNIYGTHVLLEACKLTG---Q------VKRFI 134 (684)
Q Consensus 83 ~~-----~~~d~Vih~a~~~~~~~~--------------~~~~~~~~~~n~~~~~~ll~~~~~~~---~------~~~~i 134 (684)
.. .++|+|||+||....... .++....+++|+.++.++++++...- . ..++|
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 32 379999999997543211 12344678999999999998886431 1 36999
Q ss_pred EEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHH
Q 035631 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFIL 211 (684)
Q Consensus 135 ~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~ 211 (684)
++||...+.. ..+...|+.+|+..+.+.+.++.+. ++++++++||.++++. . . . +....
T Consensus 178 ~isS~~~~~~--------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~ 239 (288)
T 2x9g_A 178 NLCDAMVDQP--------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKD 239 (288)
T ss_dssp EECCTTTTSC--------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHH
T ss_pred EEecccccCC--------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHH
Confidence 9999776532 2234579999999999998887664 8999999999999886 2 1 1 22222
Q ss_pred HHHcCCceEEecCCCceEec-ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 212 LAMKGQQLPIHGNGSNVRSY-LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
......+. ..+ ...+|+|++++.++... ..++.+++.+|..
T Consensus 240 ~~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 240 KWRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp HHHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 22222111 123 67899999999999642 3577888887643
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=8e-17 Score=161.06 Aligned_cols=219 Identities=15% Similarity=0.106 Sum_probs=156.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCc---EEEEEcCCCcccccccCC----CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDY---EIVALDKLDYCSSLKNLH----PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~l~----~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+++||||||+|+||+++++.|+++ |+ +|++.+|+.. ....+. ......++.++.+|+.|.+++..+++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEA--SNGDMKLILAARRLE--KLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEEESCHH--HHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred CCCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEEECCHH--HHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 4689999999999999999999999 55 9999999742 111111 00113467889999999999888875
Q ss_pred cC-----CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCC
Q 035631 84 SE-----GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 84 ~~-----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
.. ++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~----- 181 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDA----- 181 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCC-----
Confidence 43 79999999997541 12334466788999999999999883 334 589999999776522
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCceEEecC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF--PEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|..+... ........... ....
T Consensus 182 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~------- 244 (287)
T 3rku_A 182 ---------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNV-YKDT------- 244 (287)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHH-HTTS-------
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHh-hccc-------
Confidence 223457999999999999999877 4899999999999876210 00001111111 1111
Q ss_pred CCceEecccHHHHHHHHHHHHhcCC---CCcEEEecCCCc
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKE 261 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~~ 261 (684)
..+..+|+|++++.++..+. .++++.+.+++.
T Consensus 245 -----~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 245 -----TPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp -----CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred -----CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 12378999999999998654 357788876654
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=157.49 Aligned_cols=221 Identities=17% Similarity=0.117 Sum_probs=152.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
++++|||||+|+||+++++.|+++ |++|++.+++.. .....+.. ......+.++.+|+.|.+++..++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKA-AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCS-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999 899998855321 11111110 01234688899999999998877643
Q ss_pred CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
.++|++||+||...... ..+.....+++|+.++.++++++... ....++|++||...+...
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 169 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-------------- 169 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC--------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC--------------
Confidence 28999999999764322 22234567789999999999888653 113589999997765322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
.....|+.+|...+.+.+.++.+. ++++..++||.+..+.... .............. ....+...+|
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---------p~~r~~~ped 239 (267)
T 3u5t_A 170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE-GKSDEVRDRFAKLA---------PLERLGTPQD 239 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSS---------TTCSCBCHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc-cCCHHHHHHHHhcC---------CCCCCcCHHH
Confidence 223579999999999999998875 7999999999998763211 01111112222211 1224678999
Q ss_pred HHHHHHHHHhcC---CCCcEEEecCC
Q 035631 237 VAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 237 ~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+|++++.++... ..|+.+++.+|
T Consensus 240 vA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 240 IAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHHhCccccCccCCEEEeCCC
Confidence 999999998653 25778888765
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.8e-17 Score=165.40 Aligned_cols=222 Identities=14% Similarity=0.059 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc-CCCcccccccCCCC---CCCCCceEEEecCCCHH---------
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPS---RASPNFKFLKGDITCAD--------- 76 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~--------- 76 (684)
+.+++||||||+|+||+++++.|+++ |++|++++ |+.. ....+... ....++.++.+|+.|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 119 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAA--EANALSATLNARRPNSAITVQADLSNVATAPVSGADG 119 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence 44588999999999999999999999 89999999 7632 11111000 11246889999999988
Q ss_pred --------HHHHhhcc-----CCCCEEEEcCccCCcCCC------------------CCChHHHHHHHHHHHHHHHHHHH
Q 035631 77 --------LMNYLLVS-----EGIDTIMHFAAQTHVDNS------------------FGNSFEFTNNNIYGTHVLLEACK 125 (684)
Q Consensus 77 --------~~~~~~~~-----~~~d~Vih~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~ll~~~~ 125 (684)
.+..++.. .++|+|||+||....... .++....+++|+.++.++++++.
T Consensus 120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 199 (328)
T 2qhx_A 120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 199 (328)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766632 279999999997543221 22344678999999999998876
Q ss_pred hc---CC------CcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeC
Q 035631 126 LT---GQ------VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGN 193 (684)
Q Consensus 126 ~~---~~------~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~ 193 (684)
.. .. ..+||++||...+.. ..+...|+.+|...+.+.+.++.+. ++++..++||
T Consensus 200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~--------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG 265 (328)
T 2qhx_A 200 HRVAGTPAKHRGTNYSIINMVDAMTNQP--------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG 265 (328)
T ss_dssp HHHHHSCGGGSCSCEEEEEECCTTTTSC--------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred HHHHhcCCcCCCCCcEEEEECchhhccC--------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence 31 11 479999999776532 2234579999999999998887764 8999999999
Q ss_pred ceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 194 NVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 194 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
++..+. . .. +..........++. ..+...+|+|++++.++... ..++.+++.+|..
T Consensus 266 ~v~T~~-~--~~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 266 LSVLVD-D--MP-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp SBSCCC-C--SC-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cccCCc-c--cc-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 999876 2 22 33333333222110 03567899999999999642 3578899987754
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-17 Score=163.30 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=154.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.++++|||||+|+||+++++.|+++ |++|++++|+.... ..+.. ......+.++.+|+.|.+.+..++..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGST--AAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTT--HHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHH--HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999 89999999965211 11100 01235688999999999887776632
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~------------- 173 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR------------- 173 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC-------------
Confidence 3799999999975432 2334456678999999999998873 333 57999999987653
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCC-ceEEecCCCceEec
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEK-LIPKFILLAMKGQ-QLPIHGNGSNVRSY 231 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (684)
+..+...|+.+|...+.+.+.++.++ ++++..++||.+..+...... ..+.......... ++ ..+
T Consensus 174 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~ 243 (275)
T 4imr_A 174 -PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRA 243 (275)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSC
T ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCC
Confidence 12234569999999999998887774 799999999999765210000 0001111111100 11 124
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...+|+|++++.++... ..|+.+++.+|
T Consensus 244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 244 GRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred cCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 56899999999998653 36788988765
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-17 Score=162.13 Aligned_cols=220 Identities=16% Similarity=0.154 Sum_probs=151.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNRE--ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 899999999742 1111100 01134688899999999988776642
Q ss_pred --CCCCEEEEcCccC-Cc----CCCCCChHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQT-HV----DNSFGNSFEFTNNNIYGTHVLLEACKLT----GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+||.. .. ....+++...+++|+.++.++++++... + ..++|++||...+...
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 151 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-------- 151 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC--------
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC--------
Confidence 2799999999975 21 1223345678899999999999887642 3 5799999998765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH---------------HH-HHHHHH
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI---------------PK-FILLAM 214 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~---------------~~-~~~~~~ 214 (684)
.+...|+.+|...+.+.+.++.+ +++++.+++||++..+... ... +. ......
T Consensus 152 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T 1zem_A 152 ------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW--ERQVELQAKVGSQYFSTDPKVVAQQMI 223 (262)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH--HHHHHHHHHHTCTTSCSSHHHHHHHHH
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhh--hhccchhhhccccccccCHHHHHHHHH
Confidence 12357999999999998887755 4899999999988654210 000 01 111111
Q ss_pred cCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 215 KGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 215 ~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
...++ ..+...+|+|++++.++... ..++.+.+.+|
T Consensus 224 ~~~p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 224 GSVPM---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HTSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred hcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 11111 13567899999999988642 35677777643
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.5e-17 Score=156.25 Aligned_cols=212 Identities=17% Similarity=0.121 Sum_probs=149.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhccC---
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVSE--- 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (684)
+++||||||+|+||++++++|+++ |++|++++|+.. ....+... ....++.++.+|+.|.+++.+++...
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVD--RLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999 899999999742 11111000 11346889999999999998887432
Q ss_pred --CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 --GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||...... ..+++...+++|+.++.++++++... ....++|++||...+..
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------- 144 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL------------- 144 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-------------
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-------------
Confidence 7999999999765432 33455678899999999999988542 01257777777554321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
......|+.+|+..+.+.+.+..+ .++++..++||.+-.+...... .......++..+|
T Consensus 145 -~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-------------------~~~~~~~~~~p~d 204 (235)
T 3l77_A 145 -IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP-------------------GKPKEKGYLKPDE 204 (235)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS-------------------CCCGGGTCBCHHH
T ss_pred -CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC-------------------CcccccCCCCHHH
Confidence 112357999999999999887444 4899999999999765321100 0011125678999
Q ss_pred HHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 237 VAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 237 ~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+|+++..++..+. .+++.....++
T Consensus 205 va~~v~~l~~~~~~~~~~~~~~~~~~~ 231 (235)
T 3l77_A 205 IAEAVRCLLKLPKDVRVEELMLRSVYQ 231 (235)
T ss_dssp HHHHHHHHHTSCTTCCCCEEEECCTTS
T ss_pred HHHHHHHHHcCCCCCccceEEEeeccc
Confidence 9999999998754 33444444333
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.3e-17 Score=156.03 Aligned_cols=200 Identities=14% Similarity=0.081 Sum_probs=142.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC--CCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE--GIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 89 (684)
||+||||||+|+||++++++|+++ |++|++++|+.. ....+... ...++.++.+|+.+.+++..++... ..|+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSES--KLSTVTNC-LSNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHH--HHHHHHHT-CSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-HhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 367999999999999999999999 899999999742 22211111 1356889999999999999887533 3599
Q ss_pred EEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 90 IMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 90 Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
|||+||..... ...++....+++|+.++.++++++...- ...++|++||...+.. ..+..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~--------------~~~~~ 141 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP--------------KAQES 141 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC--------------CTTCH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC--------------CCCCc
Confidence 99999975432 2233455688999999999999886531 1239999999877532 22345
Q ss_pred hhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 164 PYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
.|+.+|...+.+.+.++.+. ++++..++||.+..+... . .. ... ....+...+|+|++
T Consensus 142 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------~----~~--~~~-------~~~~~~~~~dvA~~ 202 (230)
T 3guy_A 142 TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE------T----SG--KSL-------DTSSFMSAEDAALM 202 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------------------CCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH------h----cC--CCC-------CcccCCCHHHHHHH
Confidence 79999999999999988775 799999999988765321 0 00 001 12366889999999
Q ss_pred HHHHHhcCC
Q 035631 241 FDVILHRGV 249 (684)
Q Consensus 241 i~~~~~~~~ 249 (684)
+..++.++.
T Consensus 203 i~~l~~~~~ 211 (230)
T 3guy_A 203 IHGALANIG 211 (230)
T ss_dssp HHHHCCEET
T ss_pred HHHHHhCcC
Confidence 999987544
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=161.27 Aligned_cols=209 Identities=21% Similarity=0.220 Sum_probs=133.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHH---Hhhcc-C
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMN---YLLVS-E 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~-~ 85 (684)
+.+++||||||+|+||+++++.|++ |+.|++++|+.. ....+.. ..++.++.+|+.+.+... +.+.. .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPE--HLAALAE---IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHH--HHHHHHT---STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHH--HHHHHHh---hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 3568999999999999999999975 578999999642 2222211 246888999998875421 22221 2
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|+|||+||...... ..++....+++|+.++.++.+++. +.+ .++|++||...+...
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~------------ 140 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPH------------ 140 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC--------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCC------------
Confidence 7999999999765332 223355678999999888877764 333 799999998776432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+.++... .... .. .. ......+++.
T Consensus 141 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~----~~--~~-------~~~~~~~~~p 203 (245)
T 3e9n_A 141 --PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ--GLMD----SQ--GT-------NFRPEIYIEP 203 (245)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCGGGSCH
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh--hhhh----hh--hc-------ccccccCCCH
Confidence 23457999999999999988776 4899999999999886421 1100 00 00 0112357899
Q ss_pred HHHHHHHHHHHhcCCCCcEEEec
Q 035631 235 ADVAEAFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 235 ~D~a~~i~~~~~~~~~~~~~ni~ 257 (684)
+|+|++++.++..+..+.++|+.
T Consensus 204 ~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 204 KEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCccceeeeE
Confidence 99999999999988777788875
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=159.79 Aligned_cols=183 Identities=13% Similarity=0.103 Sum_probs=116.6
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcC-CeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKG-IAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g-~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
+|||+||||||+|+||++++++|+++| ++| .++.+|++|.+++.++++++ |+|||+|+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQ--DIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTC--SEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCC--CEEEEcCCC
Confidence 345689999999999999999999999 766 56788999999999999987 999999983
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
. .. ...+.+++++|++.++ ++|++||..+|+..+... .+..+..... +...|+.+|.
T Consensus 99 ~---~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~ 156 (236)
T 3qvo_A 99 E---DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF----VEWNNAVIGE-PLKPFRRAAD 156 (236)
T ss_dssp T---TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC--------------------CG-GGHHHHHHHH
T ss_pred C---ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCccc----ccchhhcccc-hHHHHHHHHH
Confidence 2 11 1246789999999887 699999999998544322 0133333333 4555665544
Q ss_pred hHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHH
Q 035631 509 MVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPI 588 (684)
Q Consensus 509 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~ 588 (684)
.. ...+.++.+.|+..+.+... .. ......+.. ....+++.+|+|++
T Consensus 157 ~l------~~~gi~~~~vrPg~i~~~~~---------~~--~~~~~~~~~----------------~~~~~i~~~DvA~~ 203 (236)
T 3qvo_A 157 AI------EASGLEYTILRPAWLTDEDI---------ID--YELTSRNEP----------------FKGTIVSRKSVAAL 203 (236)
T ss_dssp HH------HTSCSEEEEEEECEEECCSC---------CC--CEEECTTSC----------------CSCSEEEHHHHHHH
T ss_pred HH------HHCCCCEEEEeCCcccCCCC---------cc--eEEeccCCC----------------CCCcEECHHHHHHH
Confidence 33 33455555565553321100 00 000001100 11234999999999
Q ss_pred HHHHHhcC---ccceeEecCCCc
Q 035631 589 AIEMARRN---CRGAWNFTNPGV 608 (684)
Q Consensus 589 ~~~~~~~~---~~g~~ni~~~~~ 608 (684)
++.+++++ .++.|++++++.
T Consensus 204 i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 204 ITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp HHHHHHSTTTTTTEEEEEECSSC
T ss_pred HHHHHcCcccccCeeEEecCCCC
Confidence 99999876 456999988754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.3e-17 Score=162.06 Aligned_cols=215 Identities=14% Similarity=0.109 Sum_probs=147.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
.+++||||||+|+||+++++.|+++ |++|++++|+... ...+... .....+.++.+|+.|.+++..++...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDV--LDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999 8999999997421 1111000 01123588999999999888776432
Q ss_pred ---CCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHHh----cC-CCcEEEEEeCcccccCCCCCCCCC
Q 035631 86 ---GIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACKL----TG-QVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 86 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++|+|||+||.... ....++....+++|+.++.++.+++.. .+ ...++|++||...+..
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------- 179 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-------- 179 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC--------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC--------
Confidence 78999999997532 123345567889999998888777643 22 1369999999766422
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
..+...|+.+|...+.+.+.++.+ +++++..++||.|..+... . ... ............
T Consensus 180 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------~----~~~--~~~~~~~~~~~~ 241 (281)
T 4dry_A 180 ------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA------R----MST--GVLQANGEVAAE 241 (281)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------------C--EEECTTSCEEEC
T ss_pred ------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh------h----hcc--hhhhhhhccccc
Confidence 233467999999999999888766 4899999999998765321 0 000 000000001112
Q ss_pred ecccHHHHHHHHHHHHhcCCCCcEEE
Q 035631 230 SYLYCADVAEAFDVILHRGVIGHVYN 255 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~~~~~n 255 (684)
.++..+|+|++++.++.++....+.+
T Consensus 242 ~~~~pedvA~~v~fL~s~~~~~~i~~ 267 (281)
T 4dry_A 242 PTIPIEHIAEAVVYMASLPLSANVLT 267 (281)
T ss_dssp CCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCccCcccc
Confidence 46889999999999998776544433
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-17 Score=161.03 Aligned_cols=204 Identities=15% Similarity=0.062 Sum_probs=136.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++||
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 88 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVN 88 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999976 46778999999999888755 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
+||...... .+...+.....+++|+.++.++++++... +.++|++||...+.+ ..
T Consensus 89 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~- 150 (259)
T 4e6p_A 89 NAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------------EA- 150 (259)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------CT-
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------------CC-
Confidence 999762211 12334566788899999999999998753 347999999865521 11
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHh--hhhhhc---cccccceecCCCCCchHHHHhhh
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKA--YENVCT---LRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+...|+.||...+.+..... .+..+...++..+.++..... ...... ........++....+
T Consensus 151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------- 222 (259)
T 4e6p_A 151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFG-------- 222 (259)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS--------
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCC--------
Confidence 44689999999998743322 233444455544433221110 000000 000011111122222
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
.+.+++|+|++++.++... .+.+|++.+|..+|
T Consensus 223 ---------r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 223 ---------RMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp ---------SCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred ---------CCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 3499999999999998643 34599999887654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.5e-17 Score=163.03 Aligned_cols=217 Identities=12% Similarity=0.073 Sum_probs=147.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 95 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3589999999999999999999999876 35678999999999888753 6799
Q ss_pred EEEcceecCC---CCccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 423 VLNAAGITGR---PNVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 423 Vih~a~~~~~---~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|||+||.... +-.+...+.....+++|+.++.++++++... + .++|++||...|.+.+
T Consensus 96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------- 161 (278)
T 2bgk_A 96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE-------------- 161 (278)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------------
T ss_pred EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--------------
Confidence 9999996521 1112334566789999999999999998863 3 3799999998774211
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
. +...|+.+|...|.+..... .+..+...++..+.+...... ......++..+...
T Consensus 162 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------------~~~~~~~~~~~~~~ 222 (278)
T 2bgk_A 162 --G-VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV----------------FGVDSSRVEELAHQ 222 (278)
T ss_dssp --T-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS----------------SSCCHHHHHHHHHH
T ss_pred --C-CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh----------------cccchhHHHHhhhc
Confidence 1 44689999999988743322 233344444443321110000 00001111111111
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccHHHHHHHHHhhc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISHNEILELYKEYI 622 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~~e~~~~i~~~~ 622 (684)
. ......+++++|+|++++.++... . +..|++.+|..+++.|+++.+.+.+
T Consensus 223 ~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 223 A--ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp T--CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred c--cccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 0 011125699999999999998653 3 4489999999999999999887654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=144.82 Aligned_cols=218 Identities=17% Similarity=0.166 Sum_probs=157.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 87 (684)
.+.+|++|||||++-||+++++.|.++ |.+|++.+|+.. .. . .....++..+.+|+.|.++++++++.. ++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~--~~---~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDAD--GV---H-APRHPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTT--ST---T-SCCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HH---h-hhhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 346899999999999999999999999 899999999742 11 1 123457889999999999998887554 69
Q ss_pred CEEEEcCccCCc--CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHV--DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 88 d~Vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
|++||+||...+ ..+.++++..+++|+.++..+.+++. +.+ .++|++||...+-.. ..
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~--------------~~ 143 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGS--------------AD 143 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCC--------------SS
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCC--------------CC
Confidence 999999997543 22334566788999999988877764 333 799999997654211 12
Q ss_pred CChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 238 (684)
...|+.+|.....+.+.++.++ ++++..+.||.+-.+......--+...+...+..|+. -+...+|+|
T Consensus 144 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA 214 (242)
T 4b79_A 144 RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVA 214 (242)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence 3479999999999988887664 8999999999997763211111123333444433322 245679999
Q ss_pred HHHHHHHhcC---CCCcEEEecCC
Q 035631 239 EAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 239 ~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+++.++... ..++.+.+-+|
T Consensus 215 ~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 215 SAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhcCccCceEEECcc
Confidence 9999998543 35778888765
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.5e-17 Score=160.33 Aligned_cols=230 Identities=12% Similarity=0.083 Sum_probs=153.8
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 8 ~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
..+.+++||||||+|+||+++++.|+++ |++|++++|..... ....+.. .....++.++.+|+.|.+++..++..
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 3456689999999999999999999999 89999998753211 1111110 01134688899999999998877643
Q ss_pred -----CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||...... ..++....+++|+.++.++++++... ....++|++||...+....
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-------- 156 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG-------- 156 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC--------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC--------
Confidence 27999999999764322 23345567899999999999999763 1247999999987764321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
....|+.+|...+.+.+.++.+. ++++..++||.|..+..... ...... ...........+
T Consensus 157 ------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~---------~~~~~~~~~~r~ 220 (262)
T 3ksu_A 157 ------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ-ETKEST---------AFHKSQAMGNQL 220 (262)
T ss_dssp ------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC-C---------------------CCCCS
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc-CchHHH---------HHHHhcCcccCC
Confidence 23469999999999999988775 79999999999865421000 000000 000111112346
Q ss_pred ccHHHHHHHHHHHHhcC--CCCcEEEecCCCccC
Q 035631 232 LYCADVAEAFDVILHRG--VIGHVYNVGTKKERS 263 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~--~~~~~~ni~~~~~~t 263 (684)
...+|+|++++.++... ..|+.+++.+|....
T Consensus 221 ~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 221 TKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR 254 (262)
T ss_dssp CCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred CCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence 78899999999998752 357889998775433
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=155.44 Aligned_cols=204 Identities=16% Similarity=0.122 Sum_probs=144.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCC-CCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSR-ASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++++++|||||+|+||+++++.|+++ |++|++++|+...... ..+.... ...++.++.+|+.|.+++..++..
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999997421110 0010000 125688999999999988877643
Q ss_pred ---CCCCEEEEcCccCCcCC---CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN---SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------- 151 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYG---------- 151 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC----------------
T ss_pred HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCC----------
Confidence 37999999999754322 223445688999999999998873 334 579999999765421
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
..+...|+.+|...+.+.+.++.++ ++++..++||.+..+. .... .... ....+
T Consensus 152 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~----------~~~~--~~~~-------~~~~~ 208 (250)
T 3nyw_A 152 ----FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM----------AKKA--GTPF-------KDEEM 208 (250)
T ss_dssp -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH----------HHHT--TCCS-------CGGGS
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch----------hhhc--CCCc-------ccccC
Confidence 1234689999999999998887764 8999999999886531 1111 1111 11347
Q ss_pred ccHHHHHHHHHHHHhcCC
Q 035631 232 LYCADVAEAFDVILHRGV 249 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~~ 249 (684)
+..+|+|+++..++..+.
T Consensus 209 ~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 209 IQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp BCHHHHHHHHHHHHTSCT
T ss_pred CCHHHHHHHHHHHHcCCC
Confidence 889999999999998654
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.5e-17 Score=165.93 Aligned_cols=216 Identities=10% Similarity=0.013 Sum_probs=146.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 105 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 105 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999866 35678999999999888776 68
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----C-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----N-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|+|||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+
T Consensus 106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------- 170 (302)
T 1w6u_A 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--------------- 170 (302)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC---------------
Confidence 99999999652111 13344566789999999999999888642 2 47999999866531
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. +...|+.+|...|.+..... .+..+...++..+.+.+....... ...+...+..
T Consensus 171 --~~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------------~~~~~~~~~~ 231 (302)
T 1w6u_A 171 --SG-FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP----------------TGTFEKEMIG 231 (302)
T ss_dssp --CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT----------------TSHHHHHHHT
T ss_pred --CC-CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc----------------chhhHHHHHh
Confidence 11 45789999999998743322 233344455543332211111000 0000001110
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDP 624 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~ 624 (684)
.. ....+++++|+|++++.++... .+..|++.+|..+++.++++.+.+..|.
T Consensus 232 ~~----p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 232 RI----PCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp TC----TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred cC----CcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 00 0013489999999999998654 2448999999899999998888877664
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=155.15 Aligned_cols=216 Identities=13% Similarity=0.060 Sum_probs=145.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhccC-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLVSE-----G 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 86 (684)
++||||||+|+||+++++.|+++ |++|++++|+.. ....+.. .....++.++.+|+.|.+++..++... +
T Consensus 22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 97 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA--GWSLVLTGRREE--RLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT 97 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999 899999999742 1111110 001146889999999999998887543 5
Q ss_pred CCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCc-EEEEEeCcccccCCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVK-RFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 87 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~-~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
+|+|||+||.... ....+++...+++|+.++.++.+++. +.+ .. ++|++||...+..
T Consensus 98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~------------ 164 (272)
T 2nwq_A 98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWP------------ 164 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSC------------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccC------------
Confidence 7999999997532 12234456788999999887776664 444 46 9999999876532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
..+...|+.+|...+.+.+.++.+ +++++++++||.+.++... .....-.... . ..... ..++.
T Consensus 165 --~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~--~~~~~~~~~~---~--~~~~~----~~~~~ 231 (272)
T 2nwq_A 165 --YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSL--VRFGGDQARY---D--KTYAG----AHPIQ 231 (272)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------C----CCCBC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchh--cccccchHHH---H--Hhhcc----CCCCC
Confidence 123457999999999999888765 4799999999999876421 0000000000 0 00000 12478
Q ss_pred HHHHHHHHHHHHhcCC--CCcEEEecC
Q 035631 234 CADVAEAFDVILHRGV--IGHVYNVGT 258 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~~--~~~~~ni~~ 258 (684)
.+|+|++++.++..+. .++.+.+..
T Consensus 232 pedvA~~v~~l~s~~~~~~g~~i~v~~ 258 (272)
T 2nwq_A 232 PEDIAETIFWIMNQPAHLNINSLEIMP 258 (272)
T ss_dssp HHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCccCccceEEEee
Confidence 9999999999997543 234555543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=159.81 Aligned_cols=203 Identities=14% Similarity=0.088 Sum_probs=144.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---CCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---RASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+.+++||||||+|+||+++++.|+++ |++|++++|+.. ....+... .....+.++.+|+.|.+.+..++..
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKE--TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 345689999999999999999999999 899999999742 11111000 0113578899999999888777642
Q ss_pred ----CCCCEEEEc-CccCCcCC---CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ----EGIDTIMHF-AAQTHVDN---SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ----~~~d~Vih~-a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|+|||+ |+...... ..++....+++|+.++.++++++... + ..++|++||...+..
T Consensus 101 ~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--------- 170 (286)
T 1xu9_A 101 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVA--------- 170 (286)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSC---------
T ss_pred HHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccC---------
Confidence 379999999 56543221 22334567899999999999887542 2 369999999876532
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY-----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
..+...|+.+|...|.+.+.++.+. ++++++++||.+..+. .. ....+ ...
T Consensus 171 -----~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~------~~----~~~~~---------~~~ 226 (286)
T 1xu9_A 171 -----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET------AM----KAVSG---------IVH 226 (286)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH------HH----HHSCG---------GGG
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh------HH----Hhccc---------ccc
Confidence 1234679999999999988776554 7899999999886541 11 10000 011
Q ss_pred EecccHHHHHHHHHHHHhcCC
Q 035631 229 RSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~ 249 (684)
..+++.+|+|+.++.++..+.
T Consensus 227 ~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 227 MQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp GGCBCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcCC
Confidence 246889999999999997654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6e-16 Score=152.30 Aligned_cols=219 Identities=12% Similarity=0.095 Sum_probs=145.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhh-cc-CCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLL-VS-EGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~-~~-~~~d 88 (684)
|++||||||+|+||+++++.|+++ |++|++++|+... ...+... .....+..+ |..+.+.+.+.+ .. .++|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQ--KDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGS--HHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999 8999999996421 1111000 001223333 655554433222 11 3799
Q ss_pred EEEEcCccC-CcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQT-HVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 89 ~Vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
+|||+||.. ... ...++....+++|+.++.++++++. +.+ ..++|++||...+.. .
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------------~ 139 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP--------------W 139 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC--------------C
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC--------------C
Confidence 999999976 321 2223456788999999999988874 333 579999999776532 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH------HHHHHHHcCCceEEecCCCceEe
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIP------KFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.+...|+.+|...+.+.+.++.+. ++++++++||.++|+........+ ..........+ ...
T Consensus 140 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~ 210 (254)
T 1zmt_A 140 KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQR 210 (254)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCC
Confidence 234579999999999998887663 899999999999887532111111 11111111111 113
Q ss_pred cccHHHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+...+|+|++++.++.... .++.+++.+|.
T Consensus 211 ~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 243 (254)
T 1zmt_A 211 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 243 (254)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 5789999999999987543 57889998764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=155.96 Aligned_cols=197 Identities=11% Similarity=0.051 Sum_probs=132.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++||+||...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 108 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL 108 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
Confidence 489999999999999999999999977 46788999999999888754 6899999999763
Q ss_pred CCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 432 RPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 432 ~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
... .+...+.....+++|+.++.++++++. +.+ .++|++||+..+... +.. +...|+.
T Consensus 109 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------~~~-~~~~Y~~ 172 (260)
T 3un1_A 109 AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------------VGM-PSALASL 172 (260)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------------TTC-CCHHHHH
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------------CCC-ccHHHHH
Confidence 211 123445667889999999999999884 334 379999998654311 111 5578999
Q ss_pred hhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCcc
Q 035631 506 TKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 506 sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
||...+.+...... +..+...++..+.++...... ..........+ .+.
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~p~~-----------------r~~ 226 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET---------HSTLAGLHPVG-----------------RMG 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG---------HHHHHTTSTTS-----------------SCB
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH---------HHHHhccCCCC-----------------CCc
Confidence 99999877433222 233333333322211100000 00001111112 348
Q ss_pred chhhHHHHHHHHHhcC--ccceeEecCCCccc
Q 035631 581 VLDEMLPIAIEMARRN--CRGAWNFTNPGVIS 610 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s 610 (684)
+++|+|++++.+.+.. .+.+|++.+|...+
T Consensus 227 ~~~dva~av~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 227 EIRDVVDAVLYLEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp CHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred CHHHHHHHHHHhcccCCCCCcEEEECCCeecc
Confidence 9999999999996554 34589998876543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-16 Score=157.67 Aligned_cols=225 Identities=13% Similarity=0.062 Sum_probs=155.6
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc-CCCcccccccCCCC---CCCCCceEEEecCCCHH------
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPS---RASPNFKFLKGDITCAD------ 76 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~------ 76 (684)
|..+.++++|||||+|+||+++++.|+++ |++|++++ |+.. ....+... ....++.++.+|+.|.+
T Consensus 4 m~~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (291)
T 1e7w_A 4 MTAPTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAA--EANALSATLNARRPNSAITVQADLSNVATAPVSG 79 (291)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHH--HHHHHHHHHhhhcCCeeEEEEeecCCcccccccc
Confidence 33455689999999999999999999999 89999999 8642 11111000 11346889999999988
Q ss_pred -----------HHHHhhcc-----CCCCEEEEcCccCCcCCC------------------CCChHHHHHHHHHHHHHHHH
Q 035631 77 -----------LMNYLLVS-----EGIDTIMHFAAQTHVDNS------------------FGNSFEFTNNNIYGTHVLLE 122 (684)
Q Consensus 77 -----------~~~~~~~~-----~~~d~Vih~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~ll~ 122 (684)
.+..++.. .++|+|||+||....... .++....+++|+.++.++++
T Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 159 (291)
T 1e7w_A 80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 159 (291)
T ss_dssp ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence 77776642 279999999997543211 23345678999999999998
Q ss_pred HHHhc---CC------CcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEE
Q 035631 123 ACKLT---GQ------VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITT 190 (684)
Q Consensus 123 ~~~~~---~~------~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~il 190 (684)
++... .+ ..++|++||...+.. ..+...|+.+|...+.+.+.++.+ +++++..+
T Consensus 160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~--------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v 225 (291)
T 1e7w_A 160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGV 225 (291)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTSC--------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEEechhhcCC--------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 87631 11 479999999776532 123457999999999999888766 37999999
Q ss_pred eeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 191 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+||.+..+. . ..+..........++ + ..+...+|+|++++.++... ..++.+++.+|..
T Consensus 226 ~PG~v~T~~-~---~~~~~~~~~~~~~p~-----~---~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 226 GPGLSVLVD-D---MPPAVWEGHRSKVPL-----Y---QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287 (291)
T ss_dssp EESSBCCGG-G---SCHHHHHHHHTTCTT-----T---TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred eeCCccCCc-c---CCHHHHHHHHhhCCC-----C---CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence 999987654 1 112222222222111 0 02467899999999998642 3577888887754
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=153.66 Aligned_cols=199 Identities=10% Similarity=0.055 Sum_probs=132.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~ 430 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|+|||+||..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~ 87 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVA 87 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccC
Confidence 489999999999999999999999977 34568999999999998754 579999999965
Q ss_pred CCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 431 GRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 431 ~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
... ..+...+.....+++|+.++.++++++... + .++|++||...+.+ .. +.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~-~~~~Y 149 (244)
T 3d3w_A 88 LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------------VT-NHSVY 149 (244)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CT-TBHHH
T ss_pred CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------------CC-CCchH
Confidence 211 112234556789999999999999988753 3 47999999866531 11 45789
Q ss_pred hhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 504 SKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
+.||...|.+..... .+..+...++..+.+......... . .++..+... .....
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------------~----~~~~~~~~~----~~~~~ 208 (244)
T 3d3w_A 150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-------------P----HKAKTMLNR----IPLGK 208 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-------------T----THHHHHHHT----CTTCS
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-------------h----HHHHHHHhh----CCCCC
Confidence 999999998843322 223344444443332211110000 0 010111000 00123
Q ss_pred ccchhhHHHHHHHHHhcC---ccc-eeEecCCCcc
Q 035631 579 MTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVI 609 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~ 609 (684)
+++++|+|++++.++... ..| .|++.+|...
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 209 FAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 499999999999999754 234 8999887543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=155.40 Aligned_cols=211 Identities=16% Similarity=0.116 Sum_probs=147.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
++++++|||||+|+||+++++.|+++ |++|++++|+.. ....+... ....++.++.+|+.|.+++..++..
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVE--KLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999642 11111100 0124688899999999988877642
Q ss_pred --CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|+|||+||...... ..++....+++|+.++.++++++... .. .++|++||...+..
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~----------- 148 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN----------- 148 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------
Confidence 37999999999754321 22345567899999999999887532 12 79999999776532
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
..+...|+.+|...+.+.+.++.+ +++++++++||.+..+....... ......... . + + ...++
T Consensus 149 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~---~--~--~--~~~~~ 215 (247)
T 2jah_A 149 ---VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQ---R--I--S--QIRKL 215 (247)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHH---H--T--T--TSCCB
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHHh---c--c--c--ccCCC
Confidence 123457999999999998887765 48999999999998764211000 111111110 0 0 1 01147
Q ss_pred cHHHHHHHHHHHHhcCC
Q 035631 233 YCADVAEAFDVILHRGV 249 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~~ 249 (684)
..+|+|++++.++..+.
T Consensus 216 ~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 216 QAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp CHHHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHhCCCc
Confidence 89999999999997643
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=6.5e-16 Score=154.34 Aligned_cols=224 Identities=15% Similarity=0.084 Sum_probs=155.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+.. ....+.. ....++.++.+|+.|.+++..++..
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAE--RLRELEV-AHGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HTBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHH--HHHHHHH-HcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 899999999642 2221111 1134688999999999987776643
Q ss_pred CCCCEEEEcCccCCcCCC-----CC----ChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDNS-----FG----NSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~~-----~~----~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+||....... .+ .....+++|+.++.++++++...- ...++|++||...+...
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 149 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-------- 149 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS--------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC--------
Confidence 279999999997532111 11 245678999999999998875421 12699999997765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC--ChHH------HHHHHHHcCCceEEec
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPE--KLIP------KFILLAMKGQQLPIHG 223 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~--~~~~------~~~~~~~~~~~~~~~~ 223 (684)
.+...|+.+|...+.+.+.++.+. .+++..++||.+..+..... .... .+........+
T Consensus 150 ------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 218 (281)
T 3zv4_A 150 ------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP----- 218 (281)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-----
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-----
Confidence 223579999999999999888774 38899999999987632110 0000 01111222211
Q ss_pred CCCceEecccHHHHHHHHHHHHh-cC---CCCcEEEecCCCc
Q 035631 224 NGSNVRSYLYCADVAEAFDVILH-RG---VIGHVYNVGTKKE 261 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~-~~---~~~~~~ni~~~~~ 261 (684)
...+...+|+|++++.++. .. ..|+.+++.+|..
T Consensus 219 ----~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 219 ----IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp ----TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred ----CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 1245678999999999987 33 3678999987743
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.2e-18 Score=172.07 Aligned_cols=171 Identities=16% Similarity=0.119 Sum_probs=124.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCc-------EEEEEcCCCccccc----ccCCCCCCCCCceEEEecCCCHHHHHH
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDY-------EIVALDKLDYCSSL----KNLHPSRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~-------~V~~~~r~~~~~~~----~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
+|||+||||+||||++++..|+++ |+ +|+++++....... ..+.. ..+.++ +|+.+.+.+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~----~~~~~~-~di~~~~~~~~ 76 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELED----CAFPLL-AGLEATDDPKV 76 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT----TTCTTE-EEEEEESCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhc----cccccc-CCeEeccChHH
Confidence 468999999999999999999998 54 89999985311111 11111 111222 56665555666
Q ss_pred hhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcc-cccCCCCCCCCCCCCCC-
Q 035631 81 LLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDE-VYGETDMESDIGNPEAS- 157 (684)
Q Consensus 81 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~-vyg~~~~~~~~~~~e~~- 157 (684)
++ .++|+|||+||....+ ..++.+.++.|+.+++++++++++.+ +..+++++|+.. +..... .+..
T Consensus 77 a~--~~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~-------~~~~~ 145 (327)
T 1y7t_A 77 AF--KDADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA-------YKNAP 145 (327)
T ss_dssp HT--TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH-------HHTCT
T ss_pred Hh--CCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHH-------HHHcC
Confidence 67 6899999999976533 35678899999999999999999974 445888877643 111000 0111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ 200 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~ 200 (684)
...|.++|+.+|...|++...+++.++++.+++|+++|||+..
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 3456678999999999999999888899999999999999865
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=5.9e-16 Score=153.77 Aligned_cols=224 Identities=13% Similarity=0.071 Sum_probs=153.3
Q ss_pred CCCCEEEEEcC--CchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC--
Q 035631 10 YKPKKILITGA--AGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-- 85 (684)
Q Consensus 10 ~~~~~VlItGa--tG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (684)
+.+++|||||| +|+||+++++.|+++ |++|++++|+.... ...+... ...++.++.+|+.|.+++..++...
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRL-IQRITDR-LPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHH-HHHHHTT-SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHH-HHHHHHh-cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999 999999999999999 89999999975221 1111111 1246788999999999888776432
Q ss_pred ------CCCEEEEcCccCCc---------CCCCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCC
Q 035631 86 ------GIDTIMHFAAQTHV---------DNSFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 86 ------~~d~Vih~a~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~ 149 (684)
++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...++
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~------ 154 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA------ 154 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC------
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc------
Confidence 79999999997541 12233455678999999999999997531 125999999865432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC-------CCCh---HHHHHHHHHcC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF-------PEKL---IPKFILLAMKG 216 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~-------~~~~---~~~~~~~~~~~ 216 (684)
......|+.+|...+.+.+.++.+. ++++..++||.+..+... +... ...+.......
T Consensus 155 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (269)
T 2h7i_A 155 ---------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR 225 (269)
T ss_dssp ---------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred ---------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc
Confidence 1223579999999999998887663 899999999988654110 0000 00011111111
Q ss_pred CceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 217 QQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 217 ~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.++ + +.+...+|+|++++.++... ..++.+.+.+|.
T Consensus 226 ~p~-----~---rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 226 API-----G---WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp CTT-----C---CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred CCc-----c---cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 111 0 12566799999999999653 256788887663
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=153.80 Aligned_cols=200 Identities=13% Similarity=0.070 Sum_probs=135.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 92 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV 92 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999876 45779999999999888754 6899
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+||+||.......+...+.....+++|+.++.++++++.. .+ .++|++||...+. +..
T Consensus 93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~ 155 (256)
T 3gaf_A 93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------------TNV 155 (256)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------------CCT
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------------CCC
Confidence 9999997743333445567778999999999999999853 23 4799999986552 111
Q ss_pred CCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
+...|+.||...+.+...... +..+...++..+.++.......... ..........+.
T Consensus 156 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~p~~r----------- 218 (256)
T 3gaf_A 156 -RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEI-----ERAMLKHTPLGR----------- 218 (256)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHH-----HHHHHTTCTTSS-----------
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHH-----HHHHHhcCCCCC-----------
Confidence 457899999999887433222 2333334444333222111100000 000001111123
Q ss_pred cccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccH
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISH 611 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~ 611 (684)
+.+.+|+++++++++... .+..+++.+|...++
T Consensus 219 ------~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 219 ------LGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp ------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred ------CCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 389999999999998643 345999988877664
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.2e-15 Score=146.63 Aligned_cols=214 Identities=16% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---------CCCCCCceEEEecCCCHHHHHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---------SRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---------~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
+.++++|||||+|.||++++++|+++ |++|++++|+... ...+.. .....++.++.+|+.|.+++..
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEP--HPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSC--CSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhh--hhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 45689999999999999999999999 8999999997531 111100 0012468899999999999887
Q ss_pred hhccC-----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCC
Q 035631 81 LLVSE-----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 81 ~~~~~-----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~ 148 (684)
++... ++|++||+||...... ..++....+++|+.++.++++++... .+..++|++||...+...
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--- 159 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK--- 159 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---
Confidence 76432 8999999999765322 22344567789999999999988654 125799999997654321
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
..+...|+.+|+..+.+.+.++.+ +++++..++||++... .+........ .+
T Consensus 160 ----------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t---------~~~~~~~~~~-~~----- 214 (285)
T 3sc4_A 160 ----------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT---------AAVQNLLGGD-EA----- 214 (285)
T ss_dssp ----------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC---------HHHHHHHTSC-CC-----
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc---------HHHHhhcccc-cc-----
Confidence 022357999999999999988876 4899999999853321 1122222211 11
Q ss_pred CceEecccHHHHHHHHHHHHhcCC--CCcEEEec
Q 035631 226 SNVRSYLYCADVAEAFDVILHRGV--IGHVYNVG 257 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~~--~~~~~ni~ 257 (684)
...+...+|+|++++.++..+. .++.+.+.
T Consensus 215 --~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~d 246 (285)
T 3sc4_A 215 --MARSRKPEVYADAAYVVLNKPSSYTGNTLLCE 246 (285)
T ss_dssp --CTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred --ccCCCCHHHHHHHHHHHhCCcccccceEEEEc
Confidence 1245678999999999997653 34444443
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=157.92 Aligned_cols=207 Identities=9% Similarity=0.009 Sum_probs=133.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 100 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 100 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999876 24668999999998888743 56
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceee-ecCCCCCCCCCCCCccCCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIY-EYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy-~~~~~~~~~~~~~~~e~~~ 495 (684)
|+|||+||...... .+...+.....+++|+.++.++++++... +.++|++||...+ .+.
T Consensus 101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------- 164 (274)
T 1ja9_A 101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---------------- 164 (274)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC----------------
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC----------------
Confidence 99999999652111 12334556789999999999999999875 4579999998766 311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCC-chHHHHhhhc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNP-RNFVTKLARY 569 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~ 569 (684)
. +...|+.+|...|.+...... +..+...++..+.+................ ... ..+.......
T Consensus 165 -~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 235 (274)
T 1ja9_A 165 -P-NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYK-------GMPQEKIDEGLANM 235 (274)
T ss_dssp -C-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCT-------TCCHHHHHHHHHHT
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccc-------cCchHHHHHHHHhc
Confidence 1 346899999999988433222 333444555444333221111110000000 000 0111110000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCC
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNP 606 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~ 606 (684)
.....+++++|+|++++.++... .+..|++.+|
T Consensus 236 ----~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 236 ----NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp ----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 00124599999999999999754 2448999876
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=156.26 Aligned_cols=215 Identities=12% Similarity=0.085 Sum_probs=145.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. +
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR 91 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999999866 35668999999999888765 6
Q ss_pred CCeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 420 PTHVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 420 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+|++||+||.... +..+...+.....+++|+.++.++++++... +.++|++||...+.+
T Consensus 92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 157 (281)
T 3svt_A 92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-------------- 157 (281)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--------------
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC--------------
Confidence 8999999996311 1223344566789999999999999988753 237999999876631
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
.. +...|+.||...+.+...... +..+...++..+.++........ ..+.....
T Consensus 158 ---~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----------------~~~~~~~~ 216 (281)
T 3svt_A 158 ---HR-WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-----------------AELSSDYA 216 (281)
T ss_dssp ---CT-TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-----------------HHHHHHHH
T ss_pred ---CC-CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-----------------HHHHHHHH
Confidence 11 456899999999988433222 22333344433322211100000 00100000
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc-HHHHHHHHHhhcCCc
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS-HNEILELYKEYIDPQ 625 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s-~~e~~~~i~~~~g~~ 625 (684)
.. ..-..+.+++|++++++.++... .+..|++.+|..++ ..++++.+.+.+|.+
T Consensus 217 ~~----~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 217 MC----TPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp HH----CSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred hc----CCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 00 00013488999999999998754 34599998888777 778888888887754
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=150.83 Aligned_cols=206 Identities=15% Similarity=0.092 Sum_probs=132.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe------------------eeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------FGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
.+++|||||+|+||.+++++|+++|++|. ++.+|++|.++++.+++.. ++|++||+|
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A 85 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA 85 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35899999999999999999999999872 4568999999998888754 689999999
Q ss_pred eecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 428 GITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 428 ~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. . +..
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------------~-~~~ 147 (256)
T 2d1y_A 86 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------------Q-ENA 147 (256)
T ss_dssp CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------------T-TBH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------------C-CCh
Confidence 9762111 1223345568899999999999998864 23 379999998654211 1 446
Q ss_pred hhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 502 FYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.|+.||...+.+...... +..+...++..+.+......+............+......+
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 211 (256)
T 2d1y_A 148 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR---------------- 211 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC----------------
Confidence 899999999877433222 23333344443332211110000000000000001111112
Q ss_pred CCccchhhHHHHHHHHHhcC---ccc-eeEecCCCcccH
Q 035631 577 NSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVISH 611 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~s~ 611 (684)
.+++.+|+|++++.++... ..| .|++.+|..++.
T Consensus 212 -~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 212 -RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred -CCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 3499999999999998754 344 899988866544
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-15 Score=151.61 Aligned_cols=203 Identities=16% Similarity=0.120 Sum_probs=146.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---------CCCCCCceEEEecCCCHHHHHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---------SRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---------~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
+.+++||||||+|.||+++++.|+++ |++|++++|+.... ..+.. ......+.++.+|+.|.+++..
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~--~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPH--PKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCC--SSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhh--hhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 34689999999999999999999999 89999999975321 11100 0113467889999999999887
Q ss_pred hhccC-----CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCC
Q 035631 81 LLVSE-----GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 81 ~~~~~-----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~ 147 (684)
+++.. ++|+|||+||...... ..++....+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~-- 195 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV-- 195 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC--
Confidence 77432 8999999999764322 223456788999999999999984 333 5799999997765321
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+..+...|+.+|...+.+.+.++.+. ++++..+.|+++.... +........
T Consensus 196 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~---------~~~~~~~~~-------- 248 (346)
T 3kvo_A 196 ----------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA---------AMDMLGGPG-------- 248 (346)
T ss_dssp ----------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH---------HHHHHCC----------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH---------HHHhhcccc--------
Confidence 12234579999999999999888775 7889999999644321 111111111
Q ss_pred CceEecccHHHHHHHHHHHHhc
Q 035631 226 SNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
....+...+|+|++++.++..
T Consensus 249 -~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 249 -IESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp -CGGGCBCTHHHHHHHHHHHTS
T ss_pred -ccccCCCHHHHHHHHHHHHhc
Confidence 112356789999999999976
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-16 Score=151.65 Aligned_cols=174 Identities=14% Similarity=0.064 Sum_probs=122.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHh-cCCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKR-VRPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~-~~~d~Vih~a~~~~ 431 (684)
|++|||||+|+||.+++++|+++ +| .++.+|++|.+++.++++. .++|+|||+||...
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG 78 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 58999999999999999999988 55 3566899999999998882 13499999999662
Q ss_pred CCC-ccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 432 RPN-VDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 432 ~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
... .+...+.....+++|+.++.++++++.+.+. ++|++||...|.+ .. +...|+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-----------------~~-~~~~Y~~sK~a 140 (207)
T 2yut_A 79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-----------------VP-GFAAYAAAKGA 140 (207)
T ss_dssp CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-----------------ST-TBHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------------CC-CcchHHHHHHH
Confidence 111 1234566778999999999999999976554 6999999987741 11 55789999999
Q ss_pred HhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhh
Q 035631 510 VTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDE 584 (684)
Q Consensus 510 ~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 584 (684)
.|.+..... .+..+...++..+.+.. ..+.+...+.+ ++++|
T Consensus 141 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~----------------~~~~~~~~~~~-----------------~~~~d 187 (207)
T 2yut_A 141 LEAYLEAARKELLREGVHLVLVRLPAVATGL----------------WAPLGGPPKGA-----------------LSPEE 187 (207)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEECCCCBCSGG----------------GGGGTSCCTTC-----------------BCHHH
T ss_pred HHHHHHHHHHHHhhhCCEEEEEecCcccCCC----------------ccccCCCCCCC-----------------CCHHH
Confidence 998743322 23344445554332221 01122233456 99999
Q ss_pred HHHHHHHHHhcCcc
Q 035631 585 MLPIAIEMARRNCR 598 (684)
Q Consensus 585 ~~~~~~~~~~~~~~ 598 (684)
+|++++.+++++..
T Consensus 188 va~~~~~~~~~~~~ 201 (207)
T 2yut_A 188 AARKVLEGLFREPV 201 (207)
T ss_dssp HHHHHHHHHC--CC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999987643
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-15 Score=143.70 Aligned_cols=215 Identities=12% Similarity=0.149 Sum_probs=153.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|+|+||||||++.||+++++.|+++ |.+|++.+|+.. ....+.. ...++..+++|+.|.+++..++.. .
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~--~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEK--RSADFAK--ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHT--TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH--hcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999 899999999742 2222221 235688899999999987766532 3
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
++|++||+||.... ....++++..+++|+.++..+.+++... ..-.++|++||...+...
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~-------------- 140 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE-------------- 140 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC--------------
Confidence 79999999997543 2233456778899999998888777432 013799999997664221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
.....|+.+|.....+.+.++.+. ++++..+.||++--+... .+.. .....-|+. -+...+|+
T Consensus 141 ~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~--~~~~----~~~~~~Pl~---------R~g~pedi 205 (247)
T 3ged_A 141 PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ--EFTQ----EDCAAIPAG---------KVGTPKDI 205 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----CCH----HHHHTSTTS---------SCBCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH--HHHH----HHHhcCCCC---------CCcCHHHH
Confidence 123479999999999988887765 788999999998655321 1212 222222211 24568999
Q ss_pred HHHHHHHHhcC-CCCcEEEecCCC
Q 035631 238 AEAFDVILHRG-VIGHVYNVGTKK 260 (684)
Q Consensus 238 a~~i~~~~~~~-~~~~~~ni~~~~ 260 (684)
|.+++.++... ..|+.+.+-+|-
T Consensus 206 A~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 206 SNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHHHHhCCCCCCCeEEECcCH
Confidence 99999998754 357888887763
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.65 E-value=9e-16 Score=146.90 Aligned_cols=227 Identities=17% Similarity=0.141 Sum_probs=160.3
Q ss_pred CCCCCCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHH
Q 035631 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 1 m~~~~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
|+..++ ..+|++|||||++-||+++++.|.+. |.+|++.+|+........+. ....++..+.+|+.|.+.+..
T Consensus 1 M~n~f~---L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~--~~g~~~~~~~~Dv~d~~~v~~ 73 (247)
T 4hp8_A 1 MKNPFS---LEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIA--KDGGNASALLIDFADPLAAKD 73 (247)
T ss_dssp --CTTC---CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTTSTTTTTT
T ss_pred CcCCcC---CCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHH--HhCCcEEEEEccCCCHHHHHH
Confidence 555443 46799999999999999999999999 89999999974322222221 123467889999999999888
Q ss_pred hhccCCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 81 LLVSEGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 81 ~~~~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
++...++|++||+||.... +.+.++++..+++|+.++..+.+++. +.+.-.++|++||...+-..
T Consensus 74 ~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------- 146 (247)
T 4hp8_A 74 SFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------- 146 (247)
T ss_dssp SSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------
T ss_pred HHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-------
Confidence 8877789999999997543 23344577789999999988887653 33334799999997654221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.....|+.+|.....+.+.++.++ ++++..+-||.+-.+... ... +...+...+..|+.
T Consensus 147 -------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~--~~~~~~~~~~~~~~~~Plg------- 210 (247)
T 4hp8_A 147 -------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE--ALRADAARNKAILERIPAG------- 210 (247)
T ss_dssp -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--HHHTSHHHHHHHHTTCTTS-------
T ss_pred -------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh--hcccCHHHHHHHHhCCCCC-------
Confidence 123469999999999988887664 899999999998765320 010 11222333333322
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+-..+|+|.+++.++... ..++.+.+-+|
T Consensus 211 --R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 211 --RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp --SCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 2345699999999988643 35778888765
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.6e-16 Score=151.74 Aligned_cols=197 Identities=13% Similarity=0.043 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34589999999999999999999999876 35678999999999888765 6
Q ss_pred CCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 420 PTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+|++||+||...... .+...+.....+++|+.++.++++++. +.+. ++|++||...+.+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 148 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-------------- 148 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC--------------
Confidence 899999999762211 123445667899999999999999994 3443 79999998655311
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
. +...|+.||...+.+..... .+..+...++..+.++.. . . ....+...+..
T Consensus 149 ---~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~-----~----~----------~~~~~~~~~~~ 205 (246)
T 3osu_A 149 ---P-GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-----D----A----------LSDELKEQMLT 205 (246)
T ss_dssp ---T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCC-----S----C----------SCHHHHHHHHT
T ss_pred ---C-CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcc-----c----c----------cCHHHHHHHHh
Confidence 1 45689999999987743322 223333333332221110 0 0 00011111111
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
.. ....+.+.+|++++++.++... .+..|++.+|.
T Consensus 206 ~~----p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 206 QI----PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp TC----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred cC----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 00 0113488999999999998754 24589998764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=150.68 Aligned_cols=203 Identities=12% Similarity=0.029 Sum_probs=133.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+||
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv 91 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLC 91 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999977 24678999999999888754 679999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||...... .+...+.....+++|+.++.++++++... ..++|++||...+.+ ..
T Consensus 92 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~ 154 (263)
T 3ak4_A 92 ANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------------AP 154 (263)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------------CT
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------------CC
Confidence 9999662111 12334566788999999999999988753 357999999865421 11
Q ss_pred CCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhh-ccc----cccceecCCCCCchHHHHhh
Q 035631 498 FTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVC-TLR----LRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~g~~~~~~~~~~~~~ 567 (684)
+...|+.+|...+.+..... .+..+...++..+.++.......... ... .....+......+
T Consensus 155 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------- 226 (263)
T 3ak4_A 155 -LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLG------- 226 (263)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTC-------
T ss_pred -CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCC-------
Confidence 44689999999987733221 23444555555544332211100000 000 0000000001112
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCCc
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGV 608 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~ 608 (684)
.+++.+|+|++++.++... ..| .|++.+|..
T Consensus 227 ----------~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 227 ----------RIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp ----------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred ----------CCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 3499999999999998754 344 899988754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=8.2e-16 Score=150.44 Aligned_cols=200 Identities=14% Similarity=0.142 Sum_probs=134.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------eeeeccCCChhHHHHHHHhc----CCCeEEEcceecCCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------EFGTGRLEDKNSLLDDMKRV----RPTHVLNAAGITGRPN 434 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------~~~~~d~~d~~~~~~~~~~~----~~d~Vih~a~~~~~~~ 434 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+||......
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~ 81 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEK 81 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCccc
Confidence 3589999999999999999999999987 34678999999999988754 5699999999762111
Q ss_pred c-ccccc----chhhHhhhchhhhHHHHHHHHHc----C----C---eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 435 V-DWCES----HRVETIRTNVMGTLTLADVCKEK----N----V---LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 435 ~-~~~~~----~~~~~~~~nv~~~~~ll~~~~~~----~----~---~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
. +.... .....+++|+.++.++++++... + . ++|++||...+.+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~- 143 (242)
T 1uay_A 82 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-----------------I- 143 (242)
T ss_dssp SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-----------------T-
T ss_pred ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------------C-
Confidence 1 11112 56788999999999999999753 1 1 79999999877421 1
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+...|+.+|...+.+..... .+..+...++..+.+...... .. .+...+.. . .
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------------~~~~~~~~-~--~ 201 (242)
T 1uay_A 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PE------------------KAKASLAA-Q--V 201 (242)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CH------------------HHHHHHHT-T--C
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc-ch------------------hHHHHHHh-h--C
Confidence 45789999999987732221 234444555554443322110 00 00000000 0 0
Q ss_pred ccCCCccchhhHHHHHHHHHhcC--ccceeEecCCCccc
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGVIS 610 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s 610 (684)
+.+..+++++|+|++++.++... .+..|++.+|..++
T Consensus 202 ~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 202 PFPPRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp CSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred CCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence 11123489999999999999865 34489998876543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-15 Score=148.96 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=130.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999876 45678999999998888753 6799
Q ss_pred EEEcceecC-C-CCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITG-R-PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~-~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+||... . +..+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. +
T Consensus 94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~ 158 (260)
T 3awd_A 94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------------R 158 (260)
T ss_dssp EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------S
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------------C
Confidence 999999652 1 111223445578899999999999999875 23 469999998554211 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. |...|+.+|...|.+..... .+..+...++..+.+......... -.+...+....
T Consensus 159 ~~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~~~~~~ 220 (260)
T 3awd_A 159 PQ-QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-----------------PELYDAWIAGT 220 (260)
T ss_dssp SS-CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-----------------HHHHHHHHHTC
T ss_pred CC-CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-----------------hHHHHHHHhcC
Confidence 11 44789999999998743322 233444455543332211100000 01111111100
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPG 607 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~ 607 (684)
....+++.+|++++++.++... ..| .|++.+|.
T Consensus 221 ----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 221 ----PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred ----CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 0013489999999999998653 334 89988764
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-15 Score=162.54 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=153.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCccc-ccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCS-SLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~-~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
..+++||||||+|+||.+++++|+++ |+ +|++++|+.... ....+.. .....++.++.+|+.|.+++..++...
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 34689999999999999999999999 77 599999975311 1111100 011346789999999999998888543
Q ss_pred ----CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccc-ccCCCCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEV-YGETDMESDIGNPEA 156 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~ 156 (684)
.+|+|||+||..... .+.+.....+++|+.++.+|.++++..+ .++||++||... +|..
T Consensus 302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~----------- 369 (486)
T 2fr1_A 302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP----------- 369 (486)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT-----------
T ss_pred HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCC-----------
Confidence 579999999976432 2233455677899999999999999876 799999999755 3321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
....|+.+|...+.+.+.+. ..++++++++||.+.+.+..... .. .... .....+++.+|
T Consensus 370 ----g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~----~~---------~~~~--~~g~~~i~~e~ 429 (486)
T 2fr1_A 370 ----GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGP----VA---------DRFR--RHGVIEMPPET 429 (486)
T ss_dssp ----TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CT--TTTEECBCHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchh----HH---------HHHH--hcCCCCCCHHH
Confidence 13569999999998887664 45999999999999876431110 00 0000 11246799999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHH
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADI 271 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i 271 (684)
+++++..++...... +.+. .+.|..+...+
T Consensus 430 ~a~~l~~~l~~~~~~--~~v~---~~d~~~~~~~~ 459 (486)
T 2fr1_A 430 ACRALQNALDRAEVC--PIVI---DVRWDRFLLAY 459 (486)
T ss_dssp HHHHHHHHHHTTCSS--CEEC---EECHHHHHHHH
T ss_pred HHHHHHHHHhCCCCe--EEEE---eCCHHHHhhhh
Confidence 999999999865432 2233 25666665543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=150.38 Aligned_cols=204 Identities=12% Similarity=0.039 Sum_probs=133.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 107 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVN 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 489999999999999999999999976 45779999999999888765 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+. +.. +
T Consensus 108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~-~ 169 (277)
T 4dqx_A 108 NAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-----------------AIA-D 169 (277)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------------CCT-T
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------------CCC-C
Confidence 999762211 1233455667888999999999998864 22 3799999986653 111 4
Q ss_pred CChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
...|+.||...+.+...... +..+...++..+.++..................+......+
T Consensus 170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 235 (277)
T 4dqx_A 170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMD-------------- 235 (277)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTC--------------
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCccc--------------
Confidence 57899999999877433222 23333344443332221111100000000000011111112
Q ss_pred cCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
.+.+.+|+|++++.++... .+..+++.+|..++
T Consensus 236 ---r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 236 ---RMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp ---SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred ---CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 3389999999999998754 34489998876554
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=8.1e-16 Score=156.66 Aligned_cols=227 Identities=14% Similarity=0.033 Sum_probs=146.3
Q ss_pred CCCCCCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCH-HH
Q 035631 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCA-DL 77 (684)
Q Consensus 1 m~~~~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~-~~ 77 (684)
|.....+....+++||||||+|+||+++++.|+++ |++|++++|+..... ...+.. ....++.++.+|+.|. +.
T Consensus 1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~ 77 (311)
T 3o26_A 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKN-SNHENVVFHQLDVTDPIAT 77 (311)
T ss_dssp -----------CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHT-TTCCSEEEEECCTTSCHHH
T ss_pred CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEccCCCcHHH
Confidence 44333344455689999999999999999999999 899999999743211 111111 1234689999999997 76
Q ss_pred HHHhhcc-----CCCCEEEEcCccCCc----------------------------------CCCCCChHHHHHHHHHHHH
Q 035631 78 MNYLLVS-----EGIDTIMHFAAQTHV----------------------------------DNSFGNSFEFTNNNIYGTH 118 (684)
Q Consensus 78 ~~~~~~~-----~~~d~Vih~a~~~~~----------------------------------~~~~~~~~~~~~~n~~~~~ 118 (684)
+..++.. .++|+|||+||.... ....+.....+++|+.++.
T Consensus 78 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 157 (311)
T 3o26_A 78 MSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVK 157 (311)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHH
Confidence 6655431 389999999997632 1122334567899999988
Q ss_pred HHHHHHHh----cCCCcEEEEEeCcccccCCCCC-----------------------------CCCCCCCCCCCCCCChh
Q 035631 119 VLLEACKL----TGQVKRFIHVSTDEVYGETDME-----------------------------SDIGNPEASQLLPTNPY 165 (684)
Q Consensus 119 ~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~-----------------------------~~~~~~e~~~~~p~~~Y 165 (684)
++++++.. .+ ..++|++||...+...... ............+...|
T Consensus 158 ~l~~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 236 (311)
T 3o26_A 158 SVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY 236 (311)
T ss_dssp HHHHHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHH
T ss_pred HHHHHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhh
Confidence 88888743 33 5799999997665322100 00000111112344679
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
+.+|++.+.+.+.++.++ ++++..++||+|..+.... ......++.++.++.+
T Consensus 237 ~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~--------------------------~~~~~~~~~a~~~~~~ 290 (311)
T 3o26_A 237 TTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG--------------------------IGNYTAEEGAEHVVRI 290 (311)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT--------------------------CCSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC--------------------------CCCCCHHHHHHHHHHH
Confidence 999999999999998886 6889999999987653210 0114578888888888
Q ss_pred HhcCC--CCcEEEec
Q 035631 245 LHRGV--IGHVYNVG 257 (684)
Q Consensus 245 ~~~~~--~~~~~ni~ 257 (684)
+..+. .++.|...
T Consensus 291 ~~~~~~~~~g~~~~~ 305 (311)
T 3o26_A 291 ALFPDDGPSGFFYDC 305 (311)
T ss_dssp HTCCSSCCCSCEETC
T ss_pred HhCCCCCCCceEecc
Confidence 76542 33444444
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=6e-16 Score=154.70 Aligned_cols=220 Identities=9% Similarity=-0.008 Sum_probs=131.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG 85 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999876 23568999999998888744
Q ss_pred CCCeEEEcceecCCCC-ccc----cccchhhHhhhchhhhHHHHHHHHHc----CCeEEEEeccee-eecCCCCCCCCCC
Q 035631 419 RPTHVLNAAGITGRPN-VDW----CESHRVETIRTNVMGTLTLADVCKEK----NVLLMNFATGCI-YEYDSMHPQGSSI 488 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~-~~~----~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~i~~SS~~v-y~~~~~~~~~~~~ 488 (684)
++|++||+||...... .+. ..+.....+++|+.++.++++++... +.++|++||... +.+
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 155 (278)
T 1spx_A 86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA---------- 155 (278)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC----------
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC----------
Confidence 6799999999652111 112 34556688999999999999998764 568999999865 421
Q ss_pred CCccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHH
Q 035631 489 GFKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFV 563 (684)
Q Consensus 489 ~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 563 (684)
.. +...|+.+|...+.+..... .+..+...++..+.+......... . .......++.
T Consensus 156 -------~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~---~~~~~~~~~~ 217 (278)
T 1spx_A 156 -------TP-DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMP-------E---ETSKKFYSTM 217 (278)
T ss_dssp -------CT-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC------------------------HHHH
T ss_pred -------CC-CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccC-------c---hhhhhhhHHH
Confidence 11 44689999999987743322 233344444443321110000000 0 0000000001
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhcC----c-cceeEecCCCcccHHHHHHHHHhhc
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----C-RGAWNFTNPGVISHNEILELYKEYI 622 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~-~g~~ni~~~~~~s~~e~~~~i~~~~ 622 (684)
..+.. .. ....+++.+|+|++++.++..+ . +..|++.+|..+++.++++.+.+.+
T Consensus 218 ~~~~~---~~-p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 218 ATMKE---CV-PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHH---HC-TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred HHHHh---cC-CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 11110 00 0124689999999999998643 2 4489999999999999999988754
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=151.46 Aligned_cols=197 Identities=12% Similarity=0.049 Sum_probs=128.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 3479999999999999999999999876 46778999999999888765 78
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEecceeeecCCCCCCCCCCCC
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
|+|||+||.... +..+.+.+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 174 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----------- 174 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-----------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-----------
Confidence 999999997631 1112345667789999999999999998753 2369999998765311
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+. ....|+.+|...+.+...... +..+...++..+.++......... ............
T Consensus 175 -----~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~----- 238 (272)
T 4e3z_A 175 -----AT-QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD-----RAREMAPSVPMQ----- 238 (272)
T ss_dssp -----TT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------CCTTS-----
T ss_pred -----CC-CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH-----HHHHHhhcCCcC-----
Confidence 11 235799999999977332222 233333444433222110000000 000000000111
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCC
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNP 606 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~ 606 (684)
.+.+.+|+|++++.++... . +..|++.+|
T Consensus 239 ------------~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 239 ------------RAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp ------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ------------CCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 3378999999999998654 3 448898776
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=148.57 Aligned_cols=213 Identities=16% Similarity=0.135 Sum_probs=148.9
Q ss_pred CCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecC--CCHHHHHH
Q 035631 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDI--TCADLMNY 80 (684)
Q Consensus 6 ~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl--~d~~~~~~ 80 (684)
.+..+.+++||||||+|+||++++++|+++ |++|++++|+... ...+.. ........++.+|+ .+.+.+..
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~ 83 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEAS--LAEVSDQIKSAGQPQPLIIALNLENATAQQYRE 83 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHH
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHH--HHHHHHHHHhcCCCCceEEEeccccCCHHHHHH
Confidence 344556789999999999999999999999 8999999997421 111100 01124567788877 88887776
Q ss_pred hhcc-----CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCC
Q 035631 81 LLVS-----EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 81 ~~~~-----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~ 146 (684)
++.. .++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-- 160 (247)
T 3i1j_A 84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKG-- 160 (247)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSC--
T ss_pred HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCC--
Confidence 6532 289999999997532 12334566788999999999999883 433 579999999766432
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEe
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (684)
..+...|+.+|...+.+.+.++.+. ++++..++||.+..+. ........
T Consensus 161 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~----------~~~~~~~~----- 213 (247)
T 3i1j_A 161 ------------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM----------RAQAYPDE----- 213 (247)
T ss_dssp ------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH----------HHHHSTTS-----
T ss_pred ------------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc----------chhccccc-----
Confidence 2234579999999999998887763 6788899999875431 11111111
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEe
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNV 256 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni 256 (684)
....+...+|+|++++.++... ..|+.+++
T Consensus 214 ----~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 214 ----NPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp ----CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred ----CccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 1123467899999999998643 24566654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-15 Score=148.12 Aligned_cols=196 Identities=13% Similarity=0.050 Sum_probs=111.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY 89 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999876 46789999999999888755 6899
Q ss_pred EEEcceecCCCC----ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 423 VLNAAGITGRPN----VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 423 Vih~a~~~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+||+||..+... .+...+.....+++|+.++.++++++. +.+ .++|++||...|.
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 153 (253)
T 3qiv_A 90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---------------- 153 (253)
T ss_dssp EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC----------------
Confidence 999999731101 123345667899999999777777664 333 4799999987662
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+...|+.||...+.+...... +..+...++..+.++.......... ............+
T Consensus 154 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~------ 217 (253)
T 3qiv_A 154 -----YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEM-----VDDIVKGLPLSRM------ 217 (253)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHH-----HHHHhccCCCCCC------
Confidence 335799999999887433222 2333334443332221110000000 0000001111233
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
.+.+|++++++.++... .+..|++.+|..++
T Consensus 218 -----------~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 218 -----------GTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp -------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred -----------CCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 78999999999998654 34599998876543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=150.83 Aligned_cols=203 Identities=15% Similarity=0.091 Sum_probs=129.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------------eeeeccCCChhHHHHHHHhc-
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------------EFGTGRLEDKNSLLDDMKRV- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------------~~~~~d~~d~~~~~~~~~~~- 418 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ 86 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence 3589999999999999999999999876 23567999999999888775
Q ss_pred ----CC-CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCC
Q 035631 419 ----RP-THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGS 486 (684)
Q Consensus 419 ----~~-d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~ 486 (684)
++ |+|||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+
T Consensus 87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 158 (264)
T 2pd6_A 87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-------- 158 (264)
T ss_dssp HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC--------
T ss_pred HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC--------
Confidence 34 99999999762111 12344567789999999999999998764 3 47999999864421
Q ss_pred CCCCccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCch
Q 035631 487 SIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 487 ~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 561 (684)
.. +...|+.+|...|.+..... .+..+...++..+.+...... .. .
T Consensus 159 ---------~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------------~ 209 (264)
T 2pd6_A 159 ---------NV-GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-PQ------------------K 209 (264)
T ss_dssp ---------CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------------
T ss_pred ---------CC-CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-CH------------------H
Confidence 11 45789999999987743322 233344444443322111000 00 0
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHH
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEI 614 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~ 614 (684)
+....... . ....+++.+|+|++++.++... .+..+++.+|..++.+.+
T Consensus 210 ~~~~~~~~---~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 210 VVDKITEM---I-PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp ---CTGGG---C-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHh---C-CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 00000000 0 0013489999999999998753 344899988877665544
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=149.23 Aligned_cols=203 Identities=13% Similarity=0.087 Sum_probs=130.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
+.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 34589999999999999999999999876 34668999999999888754
Q ss_pred CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 419 RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
++|++||+||....... +.+.+.....+++|+.++.++++++. +.+ .++|++||...+.+
T Consensus 104 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 169 (281)
T 3v2h_A 104 GADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-------------- 169 (281)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC--------------
Confidence 68999999997622111 22345667889999999999999984 333 47999999865521
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhcc-ccc-----cceecCCCCCch
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTL-RLR-----MPISSDLSNPRN 561 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~g~~~~~~~ 561 (684)
.. ....|+.||...+.+..... .+..+...++..+.++............ ... ...+..+...+.
T Consensus 170 ---~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 245 (281)
T 3v2h_A 170 ---SP-FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKK 245 (281)
T ss_dssp ---CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCS
T ss_pred ---CC-CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCC
Confidence 11 34689999999988743322 2233344444433322211111100000 000 001122222234
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
| ++++|+|++++.++... . +..+++.+|.
T Consensus 246 ~-----------------~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 246 F-----------------ITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp C-----------------BCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred c-----------------cCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 4 99999999999998754 3 4488887763
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-15 Score=146.52 Aligned_cols=209 Identities=18% Similarity=0.202 Sum_probs=146.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC---------CCCCCceEEEecCCCHHHHHH
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS---------RASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~---------~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
+.++++|||||+|.||+++++.|+++ |++|++++|+... ...+... ....++.++.+|+.|.+++..
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVA--NPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSC--CTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchh--hhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 45689999999999999999999999 8999999997521 1111100 013457889999999998877
Q ss_pred hhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCC
Q 035631 81 LLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 81 ~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~ 147 (684)
++.. .++|++||+||..... ...++....+++|+.++.++.+++.. .+ ..++|++||...+....
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~- 157 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW- 157 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH-
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC-
Confidence 7643 2799999999976432 22234556889999999999988753 33 57999999976653210
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
..+...|+.+|...+.+.+.++.+. ++++..++||++..... . .. ....
T Consensus 158 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~-----~----~~-~~~~------- 209 (274)
T 3e03_A 158 -----------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA-----I----NM-LPGV------- 209 (274)
T ss_dssp -----------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CC-------
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch-----h----hh-cccc-------
Confidence 1123469999999999998887663 79999999995443221 0 00 0111
Q ss_pred CCceEecccHHHHHHHHHHHHhcCC---CCcEE
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGV---IGHVY 254 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~ 254 (684)
....+...+|+|++++.++.... .|+.+
T Consensus 210 --~~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 210 --DAAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp --CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred --cccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 11235678999999999997543 34555
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=147.86 Aligned_cols=204 Identities=14% Similarity=0.096 Sum_probs=133.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------eeeccCCChhHHHHHHHhc-----CCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------FGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~~~ 433 (684)
+++|||||+|+||.+++++|+++|++|. .+.+|++|.+++..+++.. ++|++||+||.....
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~ 108 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG 108 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 4899999999999999999999999882 3467899999888877654 689999999976321
Q ss_pred C-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhh
Q 035631 434 N-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507 (684)
Q Consensus 434 ~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK 507 (684)
. .+...+.....+++|+.++.++++++. +.+ .++|++||...+. +.. +...|+.||
T Consensus 109 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~~~-~~~~Y~asK 170 (266)
T 3uxy_A 109 RITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------------PGP-GHALYCLTK 170 (266)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------------CCT-TBHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------------CCC-CChHHHHHH
Confidence 1 123345667888999999999999984 333 4799999986552 111 456899999
Q ss_pred HhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhcccc-ccceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 508 AMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRL-RMPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 508 ~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
...+.+..... .+..+...++..+.++.............. ...........+. +.+
T Consensus 171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r-----------------~~~ 233 (266)
T 3uxy_A 171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGR-----------------IAE 233 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSS-----------------CBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCC-----------------CcC
Confidence 99998743222 233444445544433322111111000000 0000111111223 389
Q ss_pred hhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 582 LDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 582 v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
.+|+|++++.++... . +..+++.+|..++
T Consensus 234 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 234 PEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 999999999998754 3 4489998876543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=149.36 Aligned_cols=210 Identities=12% Similarity=0.050 Sum_probs=136.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD 87 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999876 23568999999999888754 679
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...|.+.
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 151 (263)
T 3ai3_A 88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL---------------- 151 (263)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------------
Confidence 9999999752111 1223455678899999999999998863 34 479999999776411
Q ss_pred CCCCCChhhhhhHhHhhhhhH---H--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYL---E--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...+.+... + ..+..+...++..+.++............ . + .....+...+....
T Consensus 152 -~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~ 221 (263)
T 3ai3_A 152 -W-YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKD-N-----G--GDWKGYLQSVADEH 221 (263)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTT-T-----T--CCHHHHHHHHHHHH
T ss_pred -C-CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcc-c-----C--CcHHHHHHHHHhcC
Confidence 1 446899999999887332 2 12344555666555444322111100000 0 0 00001111111100
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
. ....+++.+|+|++++.++... .+..|++.+|..+|
T Consensus 222 --~-p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 --A-PIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp --C-TTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred --C-CCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 0 0124599999999999998754 24489998886654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.7e-14 Score=142.30 Aligned_cols=226 Identities=14% Similarity=0.024 Sum_probs=146.1
Q ss_pred CCCCEEEEEcCC--chhHHHHHHHHHhcCCCcEEEEEcCCCc---------ccccccCCCCCCC---CCceEEEecC---
Q 035631 10 YKPKKILITGAA--GFIGSHVTNRLIKNYPDYEIVALDKLDY---------CSSLKNLHPSRAS---PNFKFLKGDI--- 72 (684)
Q Consensus 10 ~~~~~VlItGat--G~iG~~l~~~L~~~~~g~~V~~~~r~~~---------~~~~~~l~~~~~~---~~~~~~~~Dl--- 72 (684)
+.++++|||||+ |+||+++++.|+++ |++|++++|++. ......+...... .....+.+|+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence 356899999999 99999999999999 899999875310 0111111111000 0123344432
Q ss_pred -----CC------------HHHHHHhhc----c-CCCCEEEEcCccCC------cCCCCCChHHHHHHHHHHHHHHHHHH
Q 035631 73 -----TC------------ADLMNYLLV----S-EGIDTIMHFAAQTH------VDNSFGNSFEFTNNNIYGTHVLLEAC 124 (684)
Q Consensus 73 -----~d------------~~~~~~~~~----~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~ 124 (684)
.+ .+++..++. . .++|++||+||... .....+++...+++|+.++.++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 21 222222221 1 37999999998532 12233456678899999999999999
Q ss_pred HhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 035631 125 KLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT-NPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVYGP 198 (684)
Q Consensus 125 ~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 198 (684)
...- ...++|++||...+... ... ..|+.+|...+.+.+.++.+ +++++..++||++.++
T Consensus 164 ~~~m~~~g~iv~isS~~~~~~~--------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~ 229 (297)
T 1d7o_A 164 LPIMNPGGASISLTYIASERII--------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCC--------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred HHHhccCceEEEEeccccccCC--------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccc
Confidence 7631 02699999997664321 112 36999999999998877654 5899999999999988
Q ss_pred CCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 199 NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
........+.+........++ ..+...+|+|++++.++... ..++.+++.+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 230 AAKAIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp CSSCCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhhhccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 643222333333333222211 13467899999999988642 357889998774
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-15 Score=147.34 Aligned_cols=191 Identities=13% Similarity=0.053 Sum_probs=125.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC--CeE---------------------eeeeccCCChhHHHHHHHhc-------CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG--IAF---------------------EFGTGRLEDKNSLLDDMKRV-------RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g--~~v---------------------~~~~~d~~d~~~~~~~~~~~-------~~ 420 (684)
++++|||||+|+||.+++++|+++| ++| .++.+|++|.+++.++++.+ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 4589999999999999999999999 765 45678999999998888754 67
Q ss_pred CeEEEcceecC-C-CCccccccchhhHhhhchhhhHHHHHHHHHc----------------CCeEEEEecceeeecCCCC
Q 035631 421 THVLNAAGITG-R-PNVDWCESHRVETIRTNVMGTLTLADVCKEK----------------NVLLMNFATGCIYEYDSMH 482 (684)
Q Consensus 421 d~Vih~a~~~~-~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------------~~~~i~~SS~~vy~~~~~~ 482 (684)
|+|||+||... . +..+...+.....+++|+.++.++++++... ..++|++||...+.+...
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~- 161 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT- 161 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc-
Confidence 99999999762 1 1122334566788999999999999988653 357999999876542211
Q ss_pred CCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhh-----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCC
Q 035631 483 PQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFV-----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLS 557 (684)
Q Consensus 483 ~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 557 (684)
+.+++. +...|+.+|+..+.+....... ..+...++..+. ++..
T Consensus 162 ---------~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~---------------------t~~~ 210 (250)
T 1yo6_A 162 ---------SGSAQF-PVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ---------------------TNLG 210 (250)
T ss_dssp ---------STTSSS-CBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred ---------cccccC-CccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCcee---------------------cCCC
Confidence 112223 6678999999998774332222 222222222111 1110
Q ss_pred CCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCCccc
Q 035631 558 NPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVIS 610 (684)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s 610 (684)
....+ ++.+|+|++++.++... ..|.|....++.++
T Consensus 211 ~~~~~-----------------~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~ 249 (250)
T 1yo6_A 211 GKNAA-----------------LTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE 249 (250)
T ss_dssp -------------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred CCCCC-----------------CCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence 11134 89999999999999765 45666555554443
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=150.99 Aligned_cols=201 Identities=8% Similarity=-0.039 Sum_probs=131.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 93 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVD 93 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999876 34568999999988887743 679
Q ss_pred eEEEcceecC--CCCccccccchhhHhhhchhhhHHHHHHHHH----cCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITG--RPNVDWCESHRVETIRTNVMGTLTLADVCKE----KNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+||... .+..+...+.....+++|+.++.++++++.. .+. ++|++||...|.+
T Consensus 94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 157 (260)
T 2zat_A 94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP---------------- 157 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC----------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC----------------
Confidence 9999999641 1112333455678899999999999998763 343 7999999877631
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.. +...|+.+|...+.+...... +..+...++..+.++........ ..... .+..
T Consensus 158 -~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~-~~~~ 217 (260)
T 2zat_A 158 -FP-NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD-----------------KARKE-YMKE 217 (260)
T ss_dssp -CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS-----------------HHHHH-HHHH
T ss_pred -CC-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC-----------------hHHHH-HHHh
Confidence 11 456899999999877433222 22333333332221110000000 00000 0000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
.. ....+++.+|+|++++.++... .+.+|++.+|...|
T Consensus 218 --~~-~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 218 --SL-RIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp --HH-TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred --cC-CCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 00 0113489999999999998754 24489999887665
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-15 Score=149.47 Aligned_cols=198 Identities=16% Similarity=0.067 Sum_probs=124.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999876 45778999999999888755 689
Q ss_pred eEEEcceecC---CCCccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEecceeeecCCCCCCCCCCCC
Q 035631 422 HVLNAAGITG---RPNVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 422 ~Vih~a~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
++||+||..+ .+-.+.+.+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 110 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------- 178 (280)
T 4da9_A 110 CLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS----------- 178 (280)
T ss_dssp EEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------
T ss_pred EEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----------
Confidence 9999999731 11123345667789999999999999988753 2379999998665311
Q ss_pred ccCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
. +...|+.||...+.+...... +..+...++..+.++......... ...........+
T Consensus 179 ------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~p~~----- 241 (280)
T 4da9_A 179 ------P-ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY-----DGLIESGLVPMR----- 241 (280)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------
T ss_pred ------C-CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH-----HHHHhhcCCCcC-----
Confidence 1 346799999999877433222 223333333322211110000000 000000000111
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
.+.+.+|+|++++.++... . +.++++.+|..+
T Consensus 242 ------------r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 242 ------------RWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp ------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred ------------CcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence 3488999999999998754 3 448898877543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=151.38 Aligned_cols=204 Identities=11% Similarity=0.077 Sum_probs=132.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 93 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 93 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 3589999999999999999999999866 34668999999998888763 37
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|+|||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+... ..
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~ 163 (265)
T 1h5q_A 94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----------SL 163 (265)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----------ET
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----------cc
Confidence 99999999762111 12234556678999999999999998753 2 47999999876532111 01
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
++.. |...|+.+|...|.+...... +..+...++..+.+....... ..+.....
T Consensus 164 ~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~~~- 222 (265)
T 1h5q_A 164 NGSL-TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-------------------KKIRDHQA- 222 (265)
T ss_dssp TEEC-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-------------------HHHHHHHH-
T ss_pred cccc-cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-------------------hhHHHHHH-
Confidence 1222 567899999999977433221 333444444433222110000 00000000
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
.. . ....+++.+|+|++++.++... .+..|++.+|..
T Consensus 223 ~~--~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 223 SN--I-PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HT--C-TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred hc--C-cccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 00 0 0013489999999999998754 344899888753
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=148.07 Aligned_cols=221 Identities=14% Similarity=0.125 Sum_probs=154.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
..+|++|||||++.||+++++.|+++ |.+|++.+|+.. ....... .....++..+++|+.|.+++..+++.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~--~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRAT--LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHH--HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999 899999999742 1111100 01234678889999999987766532
Q ss_pred --CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||.... +.+.++++..+++|+.++..+.+++. +.+.-.++|++||...+...
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~--------- 153 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR--------- 153 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC---------
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC---------
Confidence 379999999997643 23344566788999999988887663 22224799999997664321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|.....+.+.++.+ +++++..+.||.|..+... ... +.+........|+.
T Consensus 154 -----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~Pl~--------- 217 (255)
T 4g81_D 154 -----PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT--ALIEDKQFDSWVKSSTPSQ--------- 217 (255)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH--HHHTCHHHHHHHHHHSTTC---------
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh--cccCCHHHHHHHHhCCCCC---------
Confidence 12346999999999998888766 4899999999998765320 000 12222222222222
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|+|.+++.++... ..|+.+.+-+|
T Consensus 218 R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 218 RWGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 2345689999999988542 36788888765
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.2e-15 Score=148.39 Aligned_cols=199 Identities=11% Similarity=0.066 Sum_probs=131.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999876 45678999999999988776 789
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||..... ..+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------------- 147 (258)
T 3oid_A 85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY----------------- 147 (258)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------------
Confidence 999999965211 12333455667899999999999999854 23 37999999865521
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.||...+.+...... +..+...++..+.++..... ....++.......
T Consensus 148 ~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----------------~~~~~~~~~~~~~- 208 (258)
T 3oid_A 148 LE-NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF-----------------PNREDLLEDARQN- 208 (258)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC-----------------TTHHHHHHHHHHH-
T ss_pred CC-CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc-----------------ccCHHHHHHHHhc-
Confidence 11 457899999999887433222 22233333332221110000 0000111100000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
.....+.+.+|+|+++++++... .+..+++.+|...
T Consensus 209 ---~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 209 ---TPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp ---CTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred ---CCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 00124589999999999998754 3448999887543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.3e-15 Score=158.38 Aligned_cols=226 Identities=15% Similarity=0.110 Sum_probs=158.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCccc-ccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCS-SLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~-~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
..+++||||||+|+||.+++++|.++ |+ +|++++|+.... ....+.. .....++.++.+|+.|.+.+..++...
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 34689999999999999999999998 77 688899874211 1111100 011345888999999999999998656
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCccc-ccCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEV-YGETDMESDIGNPEASQLL 160 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~e~~~~~ 160 (684)
.+|+|||+||..... ...+.....+++|+.++.+|.+++......++||++||... +|..
T Consensus 335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~--------------- 399 (511)
T 2z5l_A 335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA--------------- 399 (511)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT---------------
T ss_pred CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC---------------
Confidence 799999999976532 12233456789999999999999887623789999999744 4422
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
....|+.+|...|.+.+.+ +..++++++++||.+-+.+... .... ..... ....+++.+|++++
T Consensus 400 g~~~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~tgm~~-~~~~---~~~~~-----------~g~~~l~~e~~a~~ 463 (511)
T 2z5l_A 400 GQGAYAAANAALDALAERR-RAAGLPATSVAWGLWGGGGMAA-GAGE---ESLSR-----------RGLRAMDPDAAVDA 463 (511)
T ss_dssp TBHHHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCSTTCCC-CHHH---HHHHH-----------HTBCCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCCcccc-cccH---HHHHh-----------cCCCCCCHHHHHHH
Confidence 2357999999999999866 4569999999999885433321 2111 11111 01245889999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHH
Q 035631 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICT 273 (684)
Q Consensus 241 i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~ 273 (684)
+..++..+.. .+.+. ...|..+...+..
T Consensus 464 l~~al~~~~~--~v~v~---~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 464 LLGAMGRNDV--CVTVV---DVDWERFAPATNA 491 (511)
T ss_dssp HHHHHHHTCS--EEEEC---CBCHHHHHHHHHH
T ss_pred HHHHHhCCCC--EEEEE---eCCHHHHHhhhcc
Confidence 9999987543 33344 2567766665544
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=147.11 Aligned_cols=195 Identities=11% Similarity=0.072 Sum_probs=119.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3589999999999999999999999876 34567999999998888754 67
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecce-eeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGC-IYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~-vy~~~~~~~~~~~~~~~e~ 493 (684)
|+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||.. .|+.
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 149 (247)
T 2hq1_A 85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN--------------- 149 (247)
T ss_dssp CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------
Confidence 99999999762111 1234456678999999999998888764 34 3799999974 4431
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
. +...|+.+|...|.+...... +..+...++..+.+... ..+.... ...+......+
T Consensus 150 ---~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-~~~~~~~-----~~~~~~~~~~~-------- 211 (247)
T 2hq1_A 150 ---A-GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT-DVLPDKV-----KEMYLNNIPLK-------- 211 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-HTSCHHH-----HHHHHTTSTTS--------
T ss_pred ---C-CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccch-hhcchHH-----HHHHHhhCCCC--------
Confidence 1 346899999999877433222 22233333332221110 0000000 00000001111
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
.+++++|++++++.++... . +..||+.+|.
T Consensus 212 ---------~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 212 ---------RFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------CCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 3499999999999998753 2 3489998774
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=147.29 Aligned_cols=178 Identities=10% Similarity=0.050 Sum_probs=118.9
Q ss_pred EEEEEcCCcchhHHHHHHHH-hcCCeE---------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 373 KFLIYGKTGWIGGLLGKYCK-DKGIAF---------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~-~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
+||||||+|+||++++++|+ ++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vv~~ag~~ 84 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVGAMES 84 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTC--SEEEESCCCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCC--CEEEEcCCCC
Confidence 49999999999999999999 899876 24567899999999999877 9999999832
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHh
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
|+. +.++++++++.++ ++|++||..+|+..+.. ..+..... ..+.|+.+|..
T Consensus 85 ------------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-------~~~~~~~~-~~~~y~~~K~~ 137 (221)
T 3r6d_A 85 ------------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-------LEKWTFDN-LPISYVQGERQ 137 (221)
T ss_dssp ------------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-------HHHHHHHT-SCHHHHHHHHH
T ss_pred ------------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-------cccccccc-cccHHHHHHHH
Confidence 333 8899999999886 69999999988633221 11111111 22389999999
Q ss_pred HhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHH
Q 035631 510 VTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589 (684)
Q Consensus 510 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~ 589 (684)
+|.+... .+..+.+.++..+++... .. ......... .....+++.+|+|+++
T Consensus 138 ~e~~~~~--~~i~~~~vrpg~v~~~~~--------~~--~~~~~~~~~----------------~~~~~~~~~~dvA~~~ 189 (221)
T 3r6d_A 138 ARNVLRE--SNLNYTILRLTWLYNDPE--------XT--DYELIPEGA----------------QFNDAQVSREAVVKAI 189 (221)
T ss_dssp HHHHHHH--SCSEEEEEEECEEECCTT--------CC--CCEEECTTS----------------CCCCCEEEHHHHHHHH
T ss_pred HHHHHHh--CCCCEEEEechhhcCCCC--------Cc--ceeeccCCc----------------cCCCceeeHHHHHHHH
Confidence 9876532 344455555553321100 00 000000000 0111349999999999
Q ss_pred HHHH--hcC---ccceeEecCCC
Q 035631 590 IEMA--RRN---CRGAWNFTNPG 607 (684)
Q Consensus 590 ~~~~--~~~---~~g~~ni~~~~ 607 (684)
+.++ ..+ .++.+.++++.
T Consensus 190 ~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 190 FDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp HHHHTCSCCGGGTTEEEEEECTT
T ss_pred HHHHHhcChhhhhcceeeecCCC
Confidence 9999 655 35577777654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.8e-15 Score=147.85 Aligned_cols=197 Identities=12% Similarity=0.005 Sum_probs=122.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHh------cCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKR------VRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~------~~~d 421 (684)
++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++. -++|
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 94 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 94 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 589999999999999999999999866 3466899999998888764 3689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 158 (266)
T 1xq1_A 95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------------- 158 (266)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC----------------
Confidence 9999999652111 123345667889999999999999984 444 479999998766311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...|.+..... .+..+...++..+.++.......... ............+
T Consensus 159 -~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~-------- 223 (266)
T 1xq1_A 159 -S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF-----KKVVISRKPLGRF-------- 223 (266)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------------
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHH-----HHHHHhcCCCCCC--------
Confidence 1 44689999999998743322 23444455555444332111000000 0000000011123
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
++.+|++++++.++... . +..|++.+|..
T Consensus 224 ---------~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 224 ---------GEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp ---------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred ---------cCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence 89999999999998643 2 44889888754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-15 Score=147.38 Aligned_cols=213 Identities=12% Similarity=0.049 Sum_probs=140.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.++++|||||+|+||+++++.|+++ |++|++++|+.. ....+... ....++.++.+|+.|.+++..++..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLD--TLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 899999999642 11111000 0123578899999999887776532
Q ss_pred ---CCCCEEEEcCc--cC-------C--cCCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCC
Q 035631 85 ---EGIDTIMHFAA--QT-------H--VDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 85 ---~~~d~Vih~a~--~~-------~--~~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~ 146 (684)
.++|+|||+|| .. . .....+.+...+++|+.++.++.+++. +.+ ..++|++||...+..
T Consensus 79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-- 155 (260)
T 2qq5_A 79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY-- 155 (260)
T ss_dssp HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC--
T ss_pred hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC--
Confidence 46899999994 21 1 122334566778889888877666553 444 589999999876531
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEec
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.+...|+.+|...+.+.+.++.+ +++++++++||++..+... .....- ............
T Consensus 156 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~--~~~~~~~~~~~~ 218 (260)
T 2qq5_A 156 -------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLK--EHMAKE--EVLQDPVLKQFK 218 (260)
T ss_dssp -------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------
T ss_pred -------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHH--Hhhccc--cccchhHHHHHH
Confidence 12357999999999999888765 4899999999999876421 110000 000000000000
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
.+ ...+...+|+|++++.++..+
T Consensus 219 ~~--~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 219 SA--FSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCT
T ss_pred hh--hccCCCHHHHHHHHHHHhcCc
Confidence 00 012357899999999998754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-15 Score=147.74 Aligned_cols=127 Identities=14% Similarity=0.140 Sum_probs=99.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 432 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|++||+||....
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~ 87 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESY 87 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 3589999999999999999999999987 34678999999998888754 57999999997621
Q ss_pred CC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 433 PN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 433 ~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
.. .+...+.....+++|+.++.++++++... + .++|++||...+.+ .. +...|+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~-~~~~Y~~s 149 (264)
T 2dtx_A 88 GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------------TK-NASAYVTS 149 (264)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------------CT-TBHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------------CC-CchhHHHH
Confidence 11 12244566789999999999999998753 2 47999999876531 11 45789999
Q ss_pred hHhHhhhhh
Q 035631 507 KAMVTFLSY 515 (684)
Q Consensus 507 K~~~E~~~~ 515 (684)
|...+.+..
T Consensus 150 K~a~~~~~~ 158 (264)
T 2dtx_A 150 KHAVIGLTK 158 (264)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998743
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-15 Score=148.48 Aligned_cols=199 Identities=14% Similarity=0.109 Sum_probs=130.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 87 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKID 87 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 479999999999999999999999876 46778999999999988865 789
Q ss_pred eEEEcceec--C-CCCccccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGIT--G-RPNVDWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~--~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
++||+||.. . .+..+...+.....+++|+.++.++++++ ++.+ .++|++||.+.++..
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------- 153 (264)
T 3i4f_A 88 FLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP-------------- 153 (264)
T ss_dssp EEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC--------------
T ss_pred EEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC--------------
Confidence 999999942 1 11123344566788999999999999998 4444 479999987544211
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+.. +...|+.+|...+.+..... .+..+...++..+.++......... ..........+
T Consensus 154 -~~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~p~~-------- 217 (264)
T 3i4f_A 154 -GWI-YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEA------RQLKEHNTPIG-------- 217 (264)
T ss_dssp -CCT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHH------HHC----------------
T ss_pred -CCC-CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHH------HHHHhhcCCCC--------
Confidence 111 45789999999987743222 2233333444433222110000000 00000000111
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
.+.+.+|+|++++.++... .+.++++.+|-..
T Consensus 218 ---------r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 218 ---------RSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp ---------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred ---------CCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence 3389999999999999754 3458998877543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-15 Score=146.78 Aligned_cols=202 Identities=12% Similarity=0.012 Sum_probs=130.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHh------cCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKR------VRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~------~~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++. -++|
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 589999999999999999999999876 3467899999998888764 3689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 152 (260)
T 2ae2_A 90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA----------------- 152 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------------
Confidence 9999999652111 1233456678899999999999999853 34 37999999865521
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.||...+.+...... +..+...++..+.+.......... .....+..+...
T Consensus 153 ~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------~~~~~~~~~~~~- 216 (260)
T 2ae2_A 153 VP-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP--------------EQKENLNKLIDR- 216 (260)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH--------------HHHHHHHHHHHT-
T ss_pred CC-CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccCh--------------hhHHHHHHHHhc-
Confidence 11 446899999999987433222 233444444433322111100000 000000000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
. ....+++.+|+|++++.++... . +..+++.+|...
T Consensus 217 --~-~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 217 --C-ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp --S-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --C-CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 0 0013499999999999998643 3 448888877544
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.60 E-value=8.6e-15 Score=144.81 Aligned_cols=203 Identities=13% Similarity=0.057 Sum_probs=128.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 89 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVN 89 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 489999999999999999999999876 56789999999999888765 7899999
Q ss_pred cceecCCCC--ccccccchhhHhhhchhhhHHHHHHHHHc---------CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 426 AAGITGRPN--VDWCESHRVETIRTNVMGTLTLADVCKEK---------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 426 ~a~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
+||....+. .....+.....+++|+.++.++++++... ..++|++||...+.
T Consensus 90 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------- 152 (261)
T 3n74_A 90 NAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----------------- 152 (261)
T ss_dssp CCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----------------
T ss_pred CCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----------------
Confidence 999762111 11234566788999999999999888643 23599999985542
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
+.. ....|+.+|...+.+...... +..+...++..+.+.......... .... ...+......+
T Consensus 153 ~~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~-~~~~~~~~~~~--------- 220 (261)
T 3n74_A 153 PRP-NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED-SEEI-RKKFRDSIPMG--------- 220 (261)
T ss_dssp CCT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CTTS---------
T ss_pred CCC-CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC-cHHH-HHHHhhcCCcC---------
Confidence 111 346799999999887433222 222333333322211110000000 0000 00000111111
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccH
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISH 611 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~ 611 (684)
.+++.+|++++++.++... .+..+++.+|..++.
T Consensus 221 --------~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 221 --------RLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp --------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred --------CCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 3499999999999998643 345899988877654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.5e-15 Score=157.43 Aligned_cols=220 Identities=19% Similarity=0.107 Sum_probs=152.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE----- 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (684)
.++++|||||+|.||.+++++|+++ |.+|++++|+........+. ...++.++.+|+.|.+++..++...
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~---~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g 286 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVA---DKVGGTALTLDVTADDAVDKITAHVTEHHG 286 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHH---HHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHH---HHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 89999999864222221111 1124678999999998887776421
Q ss_pred -CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 -GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLTG---QVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.+|+|||+||..... .+.+.....+++|+.++.++.+++.... ...+||++||...+-..
T Consensus 287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~------------ 354 (454)
T 3u0b_A 287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN------------ 354 (454)
T ss_dssp TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC------------
T ss_pred CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC------------
Confidence 499999999976432 2334456788999999999999997641 25799999997765322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.+ .+++++.+.||.+..+... ..............+ ...+...
T Consensus 355 --~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~---------l~r~g~p 421 (454)
T 3u0b_A 355 --RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE--AIPLATREVGRRLNS---------LFQGGQP 421 (454)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBT---------TSSCBCH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhh--hcchhhHHHHHhhcc---------ccCCCCH
Confidence 12357999999888888777654 4899999999999876421 110000011111111 1134578
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+|+|+++..++... ..++++++.++.
T Consensus 422 edvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 422 VDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred HHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 99999999988643 367889888664
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.9e-15 Score=145.97 Aligned_cols=198 Identities=13% Similarity=0.063 Sum_probs=130.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999876 55778999999999888765 689
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||....... +...+.....+++|+.++.++++++.. .+ .++|++||...+.+.
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 148 (247)
T 3lyl_A 85 ILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN---------------- 148 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------------
Confidence 99999997622111 234556678999999999999998764 23 379999998655311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...+.+...... +..+...++..+.+... . ....-....+..
T Consensus 149 -~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----~---------------~~~~~~~~~~~~- 205 (247)
T 3lyl_A 149 -P-GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT-----D---------------KLTDEQKSFIAT- 205 (247)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT-----T---------------TSCHHHHHHHHT-
T ss_pred -C-CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccc-----h---------------hccHHHHHHHhh-
Confidence 1 446899999988877433222 22222233321111000 0 000000000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
......+.+.+|+|++++.++... .+..|++.+|..+
T Consensus 206 --~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 206 --KIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp --TSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred --cCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 001124489999999999998654 3458999877544
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-15 Score=146.80 Aligned_cols=197 Identities=12% Similarity=0.063 Sum_probs=125.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcce
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAG 428 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~ 428 (684)
.++||||||+|+||.++++.|+++|++| .+..+|+++.+++.++++.. ++|++||+||
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag 93 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAG 93 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3589999999999999999999999976 46678999999999999865 5899999999
Q ss_pred ecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 429 ITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. . +...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~-~~~~ 155 (249)
T 3f9i_A 94 ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------------P-GQAN 155 (249)
T ss_dssp -------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------------S-CSHH
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------------C-CCch
Confidence 762111 1334567789999999999999998853 23 479999998766311 1 4468
Q ss_pred hhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 503 YSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 503 Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
|+.||...+.+...... +..+...++..+.+...... . ..+...... .....
T Consensus 156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~------------------~~~~~~~~~----~~~~~ 212 (249)
T 3f9i_A 156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL-N------------------EKQREAIVQ----KIPLG 212 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-C------------------HHHHHHHHH----HCTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-C------------------HHHHHHHHh----cCCCC
Confidence 99999999877332222 22233333332221110000 0 000000000 00012
Q ss_pred CccchhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 578 SMTVLDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
.+.+.+|++++++.++... .+..|++.+|..
T Consensus 213 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 213 TYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 4489999999999999754 245899887653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.3e-15 Score=143.58 Aligned_cols=216 Identities=15% Similarity=0.128 Sum_probs=140.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-c--CCCcccccccCCCCCCCCCceEEEecCCCHHHH-HHhhcc-CC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-D--KLDYCSSLKNLHPSRASPNFKFLKGDITCADLM-NYLLVS-EG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~--r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~-~~~~~~-~~ 86 (684)
+|+||||||+|+||+++++.|+++ |++|+++ + |+.. ....+.... .+.++. |..+.+.+ ..+... .+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~--~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAA--ERQRFESEN--PGTIAL--AEQKPERLVDATLQHGEA 72 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHH--HHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHH--HHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999 8999999 6 8642 111111100 122222 44443332 222222 37
Q ss_pred CCEEEEcCccCCc---C----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 87 IDTIMHFAAQTHV---D----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 87 ~d~Vih~a~~~~~---~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
+|+|||+||.... . ...++....+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~---------- 141 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL---------- 141 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC----------
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC----------
Confidence 9999999997543 1 1223455688999999999988875 333 5899999998776421
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-CChH-HHHHHHHHc-CCceEEecCCCceE
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP-EKLI-PKFILLAMK-GQQLPIHGNGSNVR 229 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ 229 (684)
.+...|+.+|...+.+.+.++.+ +++++..++||.+..+.... .... ......... ..+ ..
T Consensus 142 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p---------~~ 208 (244)
T 1zmo_A 142 ----AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP---------LG 208 (244)
T ss_dssp ----TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT---------TC
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC---------CC
Confidence 22357999999999999888766 38999999999987653200 0000 011111111 111 01
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+...+|+|++++.++... ..++.+.+.+|
T Consensus 209 r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 209 RLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp SCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 3578899999999998753 24678888765
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.6e-15 Score=145.03 Aligned_cols=196 Identities=7% Similarity=-0.025 Sum_probs=129.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
+++|||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|++||+|
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 379999999999999999999999977 45778999999999888764 689999999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
|.......+...+.....+++|+.++.++++++... + .++|++||...+.+ .. +...
T Consensus 108 g~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~~-~~~~ 169 (260)
T 3gem_A 108 SEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------------SS-KHIA 169 (260)
T ss_dssp CCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------------CS-SCHH
T ss_pred CccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------------CC-CcHh
Confidence 976322223334455679999999999999998652 3 47999999865521 11 4568
Q ss_pred hhhhhHhHhhhhhHHhhh----hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCC
Q 035631 503 YSKTKAMVTFLSYLEIFV----LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNS 578 (684)
Q Consensus 503 Y~~sK~~~E~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 578 (684)
|+.||...+.+....... ..+...++..+.+... ....+....... .....
T Consensus 170 Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~---------------------~~~~~~~~~~~~----~p~~r 224 (260)
T 3gem_A 170 YCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPK---------------------DDAAYRANALAK----SALGI 224 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------------------------CCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCC---------------------CCHHHHHHHHhc----CCCCC
Confidence 999999998774332222 2222222322211100 000010000000 00013
Q ss_pred ccchhhHHHHHHHHHhcC-c-cceeEecCCCccc
Q 035631 579 MTVLDEMLPIAIEMARRN-C-RGAWNFTNPGVIS 610 (684)
Q Consensus 579 ~i~v~D~~~~~~~~~~~~-~-~g~~ni~~~~~~s 610 (684)
+...+|++++++++++.. . +.++++.+|..++
T Consensus 225 ~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 225 EPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred CCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 367899999999999755 3 4589998886654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.6e-15 Score=148.27 Aligned_cols=197 Identities=13% Similarity=0.065 Sum_probs=133.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 127 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999876 45778999999998888754 689
Q ss_pred eEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
++||+||.... +-.+...+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 128 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 190 (291)
T 3ijr_A 128 ILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN----------------- 190 (291)
T ss_dssp EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------------
T ss_pred EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------------
Confidence 99999996521 1112245667789999999999999999864 3479999998776421
Q ss_pred CCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK 571 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 571 (684)
. +...|+.+|...+.+...... +..+...++..+.++........ .....+......+.+
T Consensus 191 ~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~p~~r~--------- 255 (291)
T 3ijr_A 191 E-TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE-----KKVSQFGSNVPMQRP--------- 255 (291)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH-----HHHHHTTTTSTTSSC---------
T ss_pred C-CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH-----HHHHHHHccCCCCCC---------
Confidence 1 346899999999977433222 23333344443332221111000 000011111122234
Q ss_pred ccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 572 VVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 572 ~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
.+.+|+|+++++++... . +..+++.+|..
T Consensus 256 --------~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 256 --------GQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp --------BCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred --------cCHHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence 89999999999998654 3 44888877644
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.4e-15 Score=148.29 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=130.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKV 104 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3479999999999999999999999876 45678999999999888754 68
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 168 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG---------------- 168 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----------------
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC----------------
Confidence 99999999762111 1234456678899999999999998864 33 47999999865531
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.. +...|+.+|...+.+...... +..+...++..+.+... +.+.......
T Consensus 169 -~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----------------------~~~~~~~~~~ 223 (269)
T 3gk3_A 169 -AF-GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV-----------------------EAVPQDVLEA 223 (269)
T ss_dssp -CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT-----------------------TC-------C
T ss_pred -CC-CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh-----------------------hhhchhHHHH
Confidence 11 446899999998877332222 22222232221111100 0000000000
Q ss_pred ccccccC-CCccchhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 570 NKVVNIP-NSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 570 ~~~~~~~-~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
.-....+ ..+.+.+|++++++.++... . +..+++.+|..+|
T Consensus 224 ~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 224 KILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp CSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred HhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 0000011 13478999999999998754 3 4489998886553
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.3e-15 Score=146.42 Aligned_cols=199 Identities=9% Similarity=0.006 Sum_probs=130.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999876 34567999999988888754 67
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|+|||+||...... .+...+.....+++|+.++.++++++... ..++|++||...+.
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~---------------- 150 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI---------------- 150 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----------------
Confidence 99999999762111 12334566788999999999998887753 34899999975442
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
+.. +...|+.+|...+.+..... .+..+...++..+.+......... ..+...+..
T Consensus 151 -~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~~~~ 211 (261)
T 1gee_A 151 -PWP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD-----------------PEQRADVES 211 (261)
T ss_dssp -CCT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS-----------------HHHHHHHHT
T ss_pred -CCC-CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC-----------------hhHHHHHHh
Confidence 112 55789999999887733222 133344444443332211100000 000000000
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
. . ....+++.+|+|++++.++... . +..+++.++..
T Consensus 212 ~---~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 212 M---I-PMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp T---C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred c---C-CCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 0 0 0013489999999999998643 3 34888887754
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.9e-16 Score=152.05 Aligned_cols=205 Identities=14% Similarity=0.103 Sum_probs=143.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHh---cCCCcEEEEEcCCCcccccccCCC----CCCCCCceEEEecCCCHHHHHHhh
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIK---NYPDYEIVALDKLDYCSSLKNLHP----SRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~---~~~g~~V~~~~r~~~~~~~~~l~~----~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+.++++|||||+|+||+++++.|++ + |++|++++|+.. ....+.. ......+.++.+|+.|.+++..++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 79 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSES--MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHH--HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHH--HHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHH
Confidence 3567899999999999999999999 7 899999999642 1111110 001235788999999999887765
Q ss_pred cc-------CCCC--EEEEcCccCCc--C-----CCCCChHHHHHHHHHHHHHHHHHHHhcC-----CCcEEEEEeCccc
Q 035631 83 VS-------EGID--TIMHFAAQTHV--D-----NSFGNSFEFTNNNIYGTHVLLEACKLTG-----QVKRFIHVSTDEV 141 (684)
Q Consensus 83 ~~-------~~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-----~~~~~i~~SS~~v 141 (684)
.. .++| +|||+||.... . ...+++...+++|+.++.++++++...- ...++|++||...
T Consensus 80 ~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~ 159 (259)
T 1oaa_A 80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA 159 (259)
T ss_dssp HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred HHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh
Confidence 32 1467 99999997532 1 2334566788999999999999986431 2468999999877
Q ss_pred ccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHH---------H
Q 035631 142 YGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY-GLPTITTRGNNVYGPNQFPEKLIPKFI---------L 211 (684)
Q Consensus 142 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~---------~ 211 (684)
+.. ..+...|+.+|...+.+.+.++.+. ++++..++||.+-.+. ...+. .
T Consensus 160 ~~~--------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~------~~~~~~~~~~~~~~~ 219 (259)
T 1oaa_A 160 LQP--------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM------QQLARETSKDPELRS 219 (259)
T ss_dssp TSC--------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH------HHHHHHHCSCHHHHH
T ss_pred cCC--------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch------HHHHhhccCChhHHH
Confidence 532 2234579999999999999998876 4778888898775431 11111 1
Q ss_pred HHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 212 LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
..... .+ ...+...+|+|++++.++..
T Consensus 220 ~~~~~--~p-------~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 220 KLQKL--KS-------DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHH--HH-------TTCSBCHHHHHHHHHHHHHH
T ss_pred HHHHh--hh-------cCCcCCHHHHHHHHHHHHhh
Confidence 11000 00 11357899999999998864
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.3e-15 Score=146.61 Aligned_cols=198 Identities=11% Similarity=0.018 Sum_probs=132.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++.+++.. ++|+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV 108 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999976 45678999999999888754 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH-----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE-----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~-----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+||...... .+...+.....+++|+.++.++++++.. .+.++|++||...+.+.
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 171 (270)
T 3ftp_A 109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN----------------- 171 (270)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------------
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------------
Confidence 999999762111 1234456678999999999999999863 23479999998665311
Q ss_pred CCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK 571 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 571 (684)
. +...|+.+|...+.+..... .+..+...++..+.+..... .... ...........+.+
T Consensus 172 ~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~-----~~~~~~~~~p~~r~--------- 235 (270)
T 3ftp_A 172 P-GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQE-----QQTALKTQIPLGRL--------- 235 (270)
T ss_dssp T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHH-----HHHHHHTTCTTCSC---------
T ss_pred C-CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHH-----HHHHHHhcCCCCCC---------
Confidence 1 44689999998887733222 22333444444332221110 0000 00000011111233
Q ss_pred ccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 572 VVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 572 ~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
.+.+|+|+++++++... .+.++++.+|..+|
T Consensus 236 --------~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 236 --------GSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp --------BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred --------CCHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence 89999999999998643 34489998876543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.6e-15 Score=141.63 Aligned_cols=224 Identities=17% Similarity=0.131 Sum_probs=155.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++.+|.+|||||++-||+++++.|.++ |.+|++.+|+.. ..+.+.. .....++..+++|+.|.+++..++..
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~--~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLED--RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999 899999999742 2211111 11235688899999999998776532
Q ss_pred ---CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|++||+||.... +.+.++++..+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~------- 151 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGG------- 151 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSS-------
T ss_pred HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCC-------
Confidence 379999999996432 23334567789999999988877764 334 4799999997654211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHc-CCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE-KLIPKFILLAMK-GQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 227 (684)
.....|+.+|.....+.+.++.++ ++++..+.||.|-.+..... ..-....+.... ..+.
T Consensus 152 -------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-------- 216 (254)
T 4fn4_A 152 -------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS-------- 216 (254)
T ss_dssp -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC--------
T ss_pred -------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC--------
Confidence 123479999999999988887664 89999999999976532111 000111111111 1111
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.-+...+|+|.+++.++... ..|+.+.+-+|-
T Consensus 217 -~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 217 -SRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp -CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence 12356799999999998643 367888887663
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=143.55 Aligned_cols=198 Identities=13% Similarity=0.056 Sum_probs=129.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~ 91 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVN 91 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 489999999999999999999999865 34678999999998887652 6799999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+. +.. |
T Consensus 92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------~~~-~ 155 (254)
T 2wsb_A 92 SAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------------RPQ-F 155 (254)
T ss_dssp CCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------SSS-C
T ss_pred CCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------------CCC-c
Confidence 999762111 112234456788999999888777764 344 479999998765311 111 4
Q ss_pred CChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
.+.|+.+|...|.+..... .+..+...++..+.+......... -.+........
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~~~~~~---- 214 (254)
T 2wsb_A 156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER-----------------PELFETWLDMT---- 214 (254)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC-----------------HHHHHHHHHTS----
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC-----------------hHHHHHHHhcC----
Confidence 5789999999998743322 234445555554443322111000 01111111000
Q ss_pred cCCCccchhhHHHHHHHHHhcC---c-cceeEecCC
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNP 606 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~ 606 (684)
....+++++|+|++++.++... . +..+++.+|
T Consensus 215 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 215 PMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 0013499999999999998653 3 348888766
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.59 E-value=9e-15 Score=147.03 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=107.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-CCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~ 429 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|++||+||.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGI 96 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcC
Confidence 589999999999999999999999876 56779999999999999876 67999999997
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.. +....+.+.....+++|+.++.++++++..... ++|++||...+.+..... ....+..+.. +...|+.||+
T Consensus 97 ~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~----~~~~~~~~~~-~~~~Y~~sK~ 170 (291)
T 3rd5_A 97 MA-VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE----DLNWRSRRYS-PWLAYSQSKL 170 (291)
T ss_dssp CS-CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS----CTTCSSSCCC-HHHHHHHHHH
T ss_pred CC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc----cccccccCCC-CcchHHHHHH
Confidence 63 223445667788999999999999999998754 699999988764332211 0012223333 6678999999
Q ss_pred hHhhhh
Q 035631 509 MVTFLS 514 (684)
Q Consensus 509 ~~E~~~ 514 (684)
..+.+.
T Consensus 171 a~~~~~ 176 (291)
T 3rd5_A 171 ANLLFT 176 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998774
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-14 Score=140.10 Aligned_cols=228 Identities=13% Similarity=0.043 Sum_probs=156.9
Q ss_pred CCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 7 PASYKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 7 ~~~~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
|..+.+|++|||||+| -||.++++.|.++ |.+|++.+|+.... ............++..+++|+.|.+++..+++
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence 3455779999999987 8999999999999 89999999974211 11111111223468899999999988776653
Q ss_pred c-----CCCCEEEEcCccCCcC--------CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCC
Q 035631 84 S-----EGIDTIMHFAAQTHVD--------NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMES 149 (684)
Q Consensus 84 ~-----~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~ 149 (684)
. .++|++||+||..... ..++++...+++|+.++..+..++... ..-.++|++||....-
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~------ 152 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF------ 152 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS------
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc------
Confidence 2 3799999999965421 111223456688888888888777543 1236899999966532
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCC
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
+......|+.+|...+.+.+.++.+ +++++..+.||.+-.+......-.+...+......|+.
T Consensus 153 --------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------ 218 (256)
T 4fs3_A 153 --------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK------ 218 (256)
T ss_dssp --------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS------
T ss_pred --------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC------
Confidence 1222457999999999998888766 48999999999987664322222344444444433322
Q ss_pred ceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 227 NVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|+|++++.++... ..|+.+.+-+|
T Consensus 219 ---R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 219 ---RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp ---SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 2356799999999998643 35788888765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-15 Score=146.45 Aligned_cols=192 Identities=14% Similarity=0.063 Sum_probs=131.8
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeE------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
.|.+++|||||+|+||.+++++|+++|++| ..+..|++|.+++..+++.. ++|+|||+||...
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 345689999999999999999999999988 34567899999999888765 6899999999752
Q ss_pred CC--CccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 432 RP--NVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 432 ~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
.. ..+...+.....+++|+.++.++++++... +.++|++||...+. +.. +...|+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~-~~~~Y~~s 161 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------------RTS-GMIAYGAT 161 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------------CCT-TBHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------------CCC-CCchhHHH
Confidence 11 123345666788999999999999999874 23799999987652 111 45689999
Q ss_pred hHhHhhhhhHHhh-------hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 507 KAMVTFLSYLEIF-------VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 507 K~~~E~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
|...+.+...... +..+...++..+.+...... ........+
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------------~~~~~~~~~----------------- 210 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------------MSDANFDDW----------------- 210 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------------CTTSCGGGS-----------------
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------------ccccccccc-----------------
Confidence 9999877433222 22233333332221111000 001122344
Q ss_pred cchhhHHHHHHHHHhc-C----ccceeEecCCCcc
Q 035631 580 TVLDEMLPIAIEMARR-N----CRGAWNFTNPGVI 609 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~-~----~~g~~ni~~~~~~ 609 (684)
++.+|+|++++.++.. . .+..+++.+++..
T Consensus 211 ~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 211 TPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred CCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence 8999999999999987 3 3447888766543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.8e-15 Score=146.00 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=129.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 92 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 92 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 589999999999999999999999876 45678999999999888754 6799999
Q ss_pred cceecCCCCc-------cccccchhhHhhhchhhhHHHHHHHHHc----------C-CeEEEEecceeeecCCCCCCCCC
Q 035631 426 AAGITGRPNV-------DWCESHRVETIRTNVMGTLTLADVCKEK----------N-VLLMNFATGCIYEYDSMHPQGSS 487 (684)
Q Consensus 426 ~a~~~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------~-~~~i~~SS~~vy~~~~~~~~~~~ 487 (684)
+||....+.. ....+.....+++|+.++.++++++... + .++|++||...+.+.
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 164 (265)
T 2o23_A 93 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-------- 164 (265)
T ss_dssp CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--------
T ss_pred CCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC--------
Confidence 9997622111 1234556788999999999999999864 3 369999998766311
Q ss_pred CCCccCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchH
Q 035631 488 IGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNF 562 (684)
Q Consensus 488 ~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 562 (684)
. +...|+.+|...+.+...... +..+...++..+.+.... ... ...+..
T Consensus 165 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~---------------~~~~~~ 218 (265)
T 2o23_A 165 ---------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT-SLP---------------EKVCNF 218 (265)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------------CH
T ss_pred ---------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccc-ccC---------------HHHHHH
Confidence 1 446899999998877432222 222333333322111000 000 000000
Q ss_pred HHHhhhcccccccCCCccchhhHHHHHHHHHhcC-c-cceeEecCCCcc
Q 035631 563 VTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-C-RGAWNFTNPGVI 609 (684)
Q Consensus 563 ~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~-~g~~ni~~~~~~ 609 (684)
+ . ...+.+..+++.+|+|++++.++++. . +..+++.+|..+
T Consensus 219 ~----~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 219 L----A--SQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp H----H--HTCSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred H----H--HcCCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 0 0 00111124589999999999999765 3 448888776543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.2e-15 Score=144.46 Aligned_cols=198 Identities=12% Similarity=0.044 Sum_probs=129.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 3589999999999999999999999876 34568999999998888754 67
Q ss_pred CeEEEcceecCCCC----ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 421 THVLNAAGITGRPN----VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 421 d~Vih~a~~~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
|+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------- 148 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA------------- 148 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------------
Confidence 99999999762111 1223456678899999999887777653 34 47999999866531
Q ss_pred cCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
.. +...|+.+|...|.+...... +..+...++..+.+......... ..+...+
T Consensus 149 ----~~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~~ 206 (250)
T 2cfc_A 149 ----FP-GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-----------------PELRDQV 206 (250)
T ss_dssp ----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS-----------------HHHHHHH
T ss_pred ----CC-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC-----------------HHHHHHH
Confidence 11 457899999999977433221 33444445443332211110000 0111111
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
.... ....+.+.+|++++++.++..+ . +..+++.+|.
T Consensus 207 ~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 207 LARI----PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HTTC----TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HhcC----CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 1000 0013489999999999999754 2 3488887764
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=143.88 Aligned_cols=198 Identities=16% Similarity=0.081 Sum_probs=132.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 489999999999999999999999866 45778999999999888754 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||...... .+.+.+.....+++|+.++.++++++... + .++|++||...+. .+
T Consensus 91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~ 154 (262)
T 3pk0_A 91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------------TG 154 (262)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------------BC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------------CC
Confidence 9999999762111 23344566788999999999999998764 4 4799999975320 01
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.||...+.+..... ++..+...++..+.++....... ++...+.+..
T Consensus 155 ~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------------------~~~~~~~~~~ 214 (262)
T 3pk0_A 155 YP-GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE-------------------EYIASMARSI 214 (262)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH-------------------HHHHHHHTTS
T ss_pred CC-CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH-------------------HHHHHHHhcC
Confidence 11 45689999999998743322 23344445554443332211000 1111111000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
....+.+.+|+++++++++... . +..+++.+|..+
T Consensus 215 ----p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 215 ----PAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred ----CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 0013388999999999998654 3 448888877644
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=145.06 Aligned_cols=201 Identities=9% Similarity=-0.007 Sum_probs=132.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee----ccCCChhHHHHHHHhc-CCCeEEEcceecC--CCCccccccchhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT----GRLEDKNSLLDDMKRV-RPTHVLNAAGITG--RPNVDWCESHRVE 444 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~----~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~--~~~~~~~~~~~~~ 444 (684)
+++|||||+|+||.+++++|+++|++|.... +|++|.++++++++.+ ++|++||+||... .+..+...+....
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 86 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKY 86 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHh
Confidence 4799999999999999999999999986544 7999999999998865 5799999999652 1122344566778
Q ss_pred HhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhh-
Q 035631 445 TIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFV- 520 (684)
Q Consensus 445 ~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~- 520 (684)
.+++|+.++.++++++... +.++|++||...+.+ .. +...|+.+|...+.+.......
T Consensus 87 ~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------------~~-~~~~Y~asK~a~~~~~~~la~e~ 148 (223)
T 3uce_A 87 AFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------------VA-NTYVKAAINAAIEATTKVLAKEL 148 (223)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------------CT-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------------CC-CchHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999875 337999999865531 11 4568999999998874333222
Q ss_pred --hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-c
Q 035631 521 --LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-C 597 (684)
Q Consensus 521 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~ 597 (684)
..+...++..+.++.... ...+.................+.+.+|+|++++.+++.. .
T Consensus 149 ~~i~vn~v~PG~v~t~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~ 209 (223)
T 3uce_A 149 APIRVNAISPGLTKTEAYKG-------------------MNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYM 209 (223)
T ss_dssp TTSEEEEEEECSBCSGGGTT-------------------SCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTC
T ss_pred cCcEEEEEEeCCCcchhhhh-------------------cchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCC
Confidence 222222222221110000 000000000000000001124589999999999999865 3
Q ss_pred -cceeEecCCCcc
Q 035631 598 -RGAWNFTNPGVI 609 (684)
Q Consensus 598 -~g~~ni~~~~~~ 609 (684)
+..+++.+|..+
T Consensus 210 tG~~i~vdgG~~~ 222 (223)
T 3uce_A 210 TGTVIDVDGGALL 222 (223)
T ss_dssp CSCEEEESTTGGG
T ss_pred CCcEEEecCCeec
Confidence 448998887654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=143.95 Aligned_cols=130 Identities=15% Similarity=0.082 Sum_probs=100.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC---CeE-----------------------eeeeccCCChhHHHHHHHhc-----
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG---IAF-----------------------EFGTGRLEDKNSLLDDMKRV----- 418 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g---~~v-----------------------~~~~~d~~d~~~~~~~~~~~----- 418 (684)
+++++|||||+|+||.+++++|+++| ++| .++.+|++|.+++..+++.+
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 99 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 99 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence 34589999999999999999999999 765 45678999999998888744
Q ss_pred --CCCeEEEcceecC-C-CCccccccchhhHhhhchhhhHHHHHHHHHc----------------CCeEEEEecceeeec
Q 035631 419 --RPTHVLNAAGITG-R-PNVDWCESHRVETIRTNVMGTLTLADVCKEK----------------NVLLMNFATGCIYEY 478 (684)
Q Consensus 419 --~~d~Vih~a~~~~-~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------------~~~~i~~SS~~vy~~ 478 (684)
++|+|||+||... . +......+.....+++|+.++.++++++... +.++|++||...+.+
T Consensus 100 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 179 (267)
T 1sny_A 100 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 179 (267)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred CCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccccc
Confidence 5799999999752 0 1122334566788999999999999998754 357999999877642
Q ss_pred CCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 479 DSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 479 ~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
... .. +...|+.+|...+.+.
T Consensus 180 ~~~--------------~~-~~~~Y~~sK~a~~~~~ 200 (267)
T 1sny_A 180 GNT--------------DG-GMYAYRTSKSALNAAT 200 (267)
T ss_dssp TCC--------------SC-CCHHHHHHHHHHHHHH
T ss_pred CCC--------------CC-CchHHHHHHHHHHHHH
Confidence 211 11 4568999999998774
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.58 E-value=6.4e-15 Score=144.24 Aligned_cols=195 Identities=15% Similarity=0.074 Sum_probs=128.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999876 23567999999999888754 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+.
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 145 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------- 145 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------------
Confidence 9999999762111 12234566788999999999999998753 3 379999998654211
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...+.+..... .+..+...++..+.+...... .. .+.......
T Consensus 146 -~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------------~~~~~~~~~- 203 (244)
T 1edo_A 146 -I-GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-GE------------------DMEKKILGT- 203 (244)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CH------------------HHHHHHHTS-
T ss_pred -C-CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-Ch------------------HHHHHHhhc-
Confidence 1 44689999999887733221 233444444444332221100 00 000000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC-----ccceeEecCCC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN-----CRGAWNFTNPG 607 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~-----~~g~~ni~~~~ 607 (684)
. ....+++.+|++++++.++.++ .+..|++.+|.
T Consensus 204 --~-~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 204 --I-PLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp --C-TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred --C-CCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 0 0012389999999999998433 24488887764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.7e-15 Score=145.20 Aligned_cols=127 Identities=17% Similarity=0.194 Sum_probs=99.7
Q ss_pred ceEEEEEcCCcc-hhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 371 RLKFLIYGKTGW-IGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 371 ~m~ilItG~~G~-iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
.+++|||||+|+ ||.+++++|+++|++| .++.+|++|.++++++++.+ +
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 358999999985 9999999999999866 56778999999999888765 7
Q ss_pred CCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----C-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 420 PTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----N-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+|++||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.
T Consensus 102 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--------------- 166 (266)
T 3o38_A 102 LDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR--------------- 166 (266)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC---------------
T ss_pred CcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC---------------
Confidence 899999999763211 12344566788999999999999998863 2 3699999886542
Q ss_pred CCCCCCCCChhhhhhHhHhhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
+.. +...|+.+|...+.+..
T Consensus 167 --~~~-~~~~Y~~sKaa~~~~~~ 186 (266)
T 3o38_A 167 --AQH-SQSHYAAAKAGVMALTR 186 (266)
T ss_dssp --CCT-TCHHHHHHHHHHHHHHH
T ss_pred --CCC-CCchHHHHHHHHHHHHH
Confidence 111 45789999999988743
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-15 Score=148.13 Aligned_cols=197 Identities=12% Similarity=0.059 Sum_probs=128.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI 86 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999876 34567899999998888754 57
Q ss_pred CeEEEccee-cCC-CCccccccchhhHhhhchhhhHHHHHHHHH----cC------CeEEEEecceeeecCCCCCCCCCC
Q 035631 421 THVLNAAGI-TGR-PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN------VLLMNFATGCIYEYDSMHPQGSSI 488 (684)
Q Consensus 421 d~Vih~a~~-~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~------~~~i~~SS~~vy~~~~~~~~~~~~ 488 (684)
|+|||+||. ... +..+...+.....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------- 156 (258)
T 3afn_B 87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---------- 156 (258)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------
T ss_pred CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------
Confidence 999999996 311 111223345667889999999999997753 22 47999998865531
Q ss_pred CCccCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHH
Q 035631 489 GFKEDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFV 563 (684)
Q Consensus 489 ~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 563 (684)
+.. +...|+.+|...|.+...... +..+...++..+.+...... ...+.
T Consensus 157 ------~~~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------~~~~~ 210 (258)
T 3afn_B 157 ------GGP-GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-------------------TQDVR 210 (258)
T ss_dssp ------CCT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-------------------CHHHH
T ss_pred ------CCC-CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-------------------CHHHH
Confidence 011 457899999999987433221 33344444443322211000 00111
Q ss_pred HHhhhcccccccCCCccchhhHHHHHHHHHhcC-----ccceeEecCCC
Q 035631 564 TKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-----CRGAWNFTNPG 607 (684)
Q Consensus 564 ~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-----~~g~~ni~~~~ 607 (684)
..+.... ....+++++|+|++++.++... .+..|++.++.
T Consensus 211 ~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 211 DRISNGI----PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp HHHHTTC----TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHhccC----CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 1111100 0013499999999999998753 23489988764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=7.9e-15 Score=145.58 Aligned_cols=199 Identities=12% Similarity=0.052 Sum_probs=130.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~----~~d~Vi 424 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+.+.. ++|++|
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv 111 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLV 111 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEE
Confidence 489999999999999999999999876 45778999999988775432 689999
Q ss_pred EcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||....... +...+.....+++|+.++.++++++.. .+ .++|++||...+.+ ..
T Consensus 112 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------------~~- 173 (273)
T 3uf0_A 112 NNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----------------GR- 173 (273)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------CS-
T ss_pred ECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----------------CC-
Confidence 99997632111 234456678999999999999998843 33 47999999866521 11
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+...|+.+|...+.+..... .+..+...++..+.++........ ..+...+...
T Consensus 174 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~~~---- 232 (273)
T 3uf0_A 174 NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD-----------------DERAAEITAR---- 232 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-----------------HHHHHHHHHH----
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-----------------HHHHHHHHhc----
Confidence 45689999999987743322 223333344443322211100000 0000000000
Q ss_pred ccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
.....+.+.+|+|+++++++... .+..+++.+|..+
T Consensus 233 ~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 233 IPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 00113489999999999998754 3448999887654
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.9e-15 Score=143.89 Aligned_cols=199 Identities=12% Similarity=0.181 Sum_probs=131.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++||
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 87 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVN 87 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999876 45678999999999888754 6899999
Q ss_pred cceecCCCCc-----cccccchhhHhhhchhhhHHHHHHHHHc-----------CCeEEEEecceeeecCCCCCCCCCCC
Q 035631 426 AAGITGRPNV-----DWCESHRVETIRTNVMGTLTLADVCKEK-----------NVLLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 426 ~a~~~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----------~~~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
+||....... +...+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 88 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~---------- 157 (257)
T 3tpc_A 88 CAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ---------- 157 (257)
T ss_dssp CCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----------
T ss_pred CCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC----------
Confidence 9997621111 2334566788999999999999999863 2369999998766311
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHH
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 564 (684)
. +...|+.||...+.+..... .+..+...++..+.++..... .. ++.
T Consensus 158 -------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~------------------~~~- 209 (257)
T 3tpc_A 158 -------I-GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM-PQ------------------DVQ- 209 (257)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------------------
T ss_pred -------C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-CH------------------HHH-
Confidence 1 44689999999987733222 223333344432221111000 00 000
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcC-c-cceeEecCCCccc
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-C-RGAWNFTNPGVIS 610 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~-~g~~ni~~~~~~s 610 (684)
..+ ....+.+..+.+.+|++++++.+++.. . +..+++.+|..++
T Consensus 210 ~~~--~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 210 DAL--AASVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHH--HhcCCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 000 001111124489999999999999765 3 4488888776554
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.58 E-value=8.4e-15 Score=144.22 Aligned_cols=203 Identities=14% Similarity=0.044 Sum_probs=130.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 83 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL 83 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3589999999999999999999999876 34568999999999888744 57999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
||+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+. .
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~ 146 (255)
T 2q2v_A 84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------------T 146 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------------T
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------------C
Confidence 99999762111 123345567889999998887777663 444 379999998765311 1
Q ss_pred CCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhh---hhhhcccc-cccee-cCCCCCchHHHHhh
Q 035631 498 FTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAY---ENVCTLRL-RMPIS-SDLSNPRNFVTKLA 567 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~-g~~~~~~~~~~~~~ 567 (684)
+...|+.+|...+.+..... .+..+...++..+.++...... ........ ....+ ......+.|
T Consensus 147 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----- 220 (255)
T 2q2v_A 147 -GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF----- 220 (255)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCC-----
T ss_pred -CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCC-----
Confidence 34689999999987743322 2344445555544433221110 00000000 00000 111112234
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
++.+|+|++++.++... . +..|++.+|..
T Consensus 221 ------------~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 221 ------------VTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp ------------BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred ------------cCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 99999999999998654 2 44888887743
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=142.84 Aligned_cols=207 Identities=13% Similarity=0.053 Sum_probs=130.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 489999999999999999999999876 34678999999998888753 6799
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C--CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 145 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG----------------- 145 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------------
Confidence 999999652111 12334556678999999999988887652 3 47999999864421
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.+|...+.+..... .+..+...++..+.++.......... . ..+.. ...+...+...
T Consensus 146 ~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~-----~~~~~--~~~~~~~~~~~- 215 (256)
T 1geg_A 146 NP-ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVS-E-----AAGKP--LGYGTAEFAKR- 215 (256)
T ss_dssp CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHH-H-----HHTCC--TTHHHHHHHTT-
T ss_pred CC-CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhcc-c-----cccCC--hHHHHHHHHhc-
Confidence 11 34689999999987733221 23344445555443322111000000 0 00000 00110000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCCc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGV 608 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~ 608 (684)
. ....+.+.+|+|+++++++... ..| .+++.+|..
T Consensus 216 --~-p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 216 --I-TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp --C-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred --C-CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 0 0113589999999999998654 344 788777643
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=144.97 Aligned_cols=199 Identities=13% Similarity=0.048 Sum_probs=134.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 129 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGL 129 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999876 35678999999998887654 68
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|++||+||.... +-.+...+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 130 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~---------------- 193 (294)
T 3r3s_A 130 DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS---------------- 193 (294)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC----------------
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC----------------
Confidence 999999997521 1123345666789999999999999999875 3479999998766411
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. ....|+.+|...+.+..... .+..+...++..+.+......... ......+......+.+
T Consensus 194 -~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~p~~r~-------- 259 (294)
T 3r3s_A 194 -P-HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT----QDKIPQFGQQTPMKRA-------- 259 (294)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC----GGGSTTTTTTSTTSSC--------
T ss_pred -C-CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC----HHHHHHHHhcCCCCCC--------
Confidence 1 44689999999988733222 233444444444333221100000 0000011111112233
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~ 609 (684)
...+|+++++++++... .+.++++.+|..+
T Consensus 260 ---------~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 260 ---------GQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp ---------BCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred ---------cCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 89999999999998644 3458999887654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.5e-15 Score=145.50 Aligned_cols=208 Identities=13% Similarity=0.063 Sum_probs=132.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
.++||||||+|+||.+++++|+++|++| ..+.+|++|.+++.++++.. ++|++||+||...
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ 93 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 3589999999999999999999999987 45678999999999888765 6899999999762
Q ss_pred CCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 432 RPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 432 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
.... +...+.....+++|+.++.++++++.. .+ .++|++||...|.+. . +...|+.
T Consensus 94 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~-~~~~Y~a 155 (269)
T 3vtz_A 94 YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----------------K-NAAAYVT 155 (269)
T ss_dssp CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------------T-TCHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------------C-CChhHHH
Confidence 2111 223344567888999999999998764 23 479999998776411 1 4468999
Q ss_pred hhHhHhhhhhHHhh----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 506 TKAMVTFLSYLEIF----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 506 sK~~~E~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
||...+.+...... +..+...++..+.+............. .......++..... ......+.+
T Consensus 156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~--------~~~~~~~~~~~~~~----~~p~~r~~~ 223 (269)
T 3vtz_A 156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGE--------DENAVERKIEEWGR----QHPMGRIGR 223 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCC--------STTHHHHHHHHHHH----HSTTSSCBC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccc--------cchhhHHHHHHHHh----cCCCCCCcC
Confidence 99999987433222 233333444433322211111000000 00000001000000 000113489
Q ss_pred hhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 582 LDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 582 v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
.+|+|++++.++... .+..+++.+|..
T Consensus 224 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 224 PEEVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 999999999998754 344899887743
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=142.93 Aligned_cols=202 Identities=15% Similarity=0.079 Sum_probs=134.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 489999999999999999999999876 46788999999999888765 6899
Q ss_pred EEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+||.... +..+.+.+.....+++|+.++.++++++.. .+.++|++||...+.+ .
T Consensus 92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~ 154 (264)
T 3ucx_A 92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-----------------Q 154 (264)
T ss_dssp EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-----------------C
T ss_pred EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-----------------C
Confidence 9999986411 112334566678899999999999998764 3458999999865531 1
Q ss_pred CCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhcc-ccc----cceecCCCCCchHHHHh
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTL-RLR----MPISSDLSNPRNFVTKL 566 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~g~~~~~~~~~~~~ 566 (684)
. +...|+.||...+.+..... ++..+...++..+.++............ ... ..........+
T Consensus 155 ~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------ 227 (264)
T 3ucx_A 155 A-KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLK------ 227 (264)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSS------
T ss_pred C-ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcc------
Confidence 1 44689999999987733222 2334444555544333221111110000 000 00001111122
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
.+.+.+|+|+++++++... .+..+++.+|..
T Consensus 228 -----------r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 228 -----------RLPTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp -----------SCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred -----------cCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 3489999999999998643 344889887754
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-15 Score=150.34 Aligned_cols=210 Identities=10% Similarity=-0.017 Sum_probs=128.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee-----------eeccCCChhHHHHHHHhc--CCCeEEEcceecCCCCcccc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF-----------GTGRLEDKNSLLDDMKRV--RPTHVLNAAGITGRPNVDWC 438 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~-----------~~~d~~d~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~ 438 (684)
+++|||||+|+||.+++++|+++|++|.. +.+|++|.++++++++.+ ++|++||+||... .
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~------~ 75 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP------Q 75 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT------T
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC------C
Confidence 47999999999999999999999999844 346888888999888765 6899999999651 0
Q ss_pred ccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC-----------CCCCCCCh
Q 035631 439 ESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD-----------EPNFTRSF 502 (684)
Q Consensus 439 ~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~-----------~~~~p~~~ 502 (684)
.......+++|+.++.++++++.. .+ .++|++||...+......+..+. .+.+.+ .+..+...
T Consensus 76 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 1fjh_A 76 TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL-ALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH-HHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhh-hhcccchhhhhhhhhcccCCCCccH
Confidence 234678999999999999999974 23 47999999988732211110000 000000 11114567
Q ss_pred hhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC-
Q 035631 503 YSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP- 576 (684)
Q Consensus 503 Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 576 (684)
|+.||...+.+..... .+..+...++..+.+............ ..++ .. ...+
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--------------~~~~----~~---~~~~~ 213 (257)
T 1fjh_A 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY--------------GESI----AK---FVPPM 213 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------------------------CCCST
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH--------------HHHH----Hh---ccccc
Confidence 9999999987743321 233344444443332211100000000 0000 00 0001
Q ss_pred CCccchhhHHHHHHHHHhcC---ccc-eeEecCCCcc
Q 035631 577 NSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVI 609 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~ 609 (684)
..+++.+|+|++++.++..+ ..| .|++.+|...
T Consensus 214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence 13489999999999998754 334 7777776443
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=145.64 Aligned_cols=195 Identities=12% Similarity=0.055 Sum_probs=126.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 86 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI 86 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3589999999999999999999999876 23567999999999888754 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||...... .+...+.....+++|+.++.++++++. +.+. ++|++||...+.+.
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 151 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN--------------- 151 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC---------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC---------------
Confidence 99999999662111 123345667889999999977777654 3444 79999998644211
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
. +...|+.+|...+.+...... +..+...++..+.+.... .+. ..+. ..+..
T Consensus 152 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-~~~------------------~~~~-~~~~~ 208 (248)
T 2pnf_A 152 --V-GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-VLS------------------EEIK-QKYKE 208 (248)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-GSC------------------HHHH-HHHHH
T ss_pred --C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-hcc------------------HHHH-HHHHh
Confidence 1 346899999999877433222 223333333322211100 000 0010 00000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCC
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNP 606 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~ 606 (684)
. .....+++++|++++++.++... .+..|++.+|
T Consensus 209 ~---~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 209 Q---IPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp T---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c---CCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 0 00123599999999999998753 2448998776
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=6.5e-15 Score=147.33 Aligned_cols=213 Identities=12% Similarity=0.015 Sum_probs=133.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------------eeeccCCChhHHHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------------FGTGRLEDKNSLLDDM 415 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~d~~d~~~~~~~~ 415 (684)
+++|||||+|+||.+++++|+++|++|. ++.+|++|.+++.+++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5899999999999999999999998762 3467999999999888
Q ss_pred Hhc-----CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCC
Q 035631 416 KRV-----RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQ 484 (684)
Q Consensus 416 ~~~-----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~ 484 (684)
+.. ++|++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 164 (281)
T 3s55_A 91 AEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA------ 164 (281)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC------
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC------
Confidence 754 6899999999762111 2334556678899999999999999743 33 47999999866531
Q ss_pred CCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCC
Q 035631 485 GSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNP 559 (684)
Q Consensus 485 ~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 559 (684)
.. +...|+.+|...+.+..... ++..+...++..+.++........ ....... . ...
T Consensus 165 -----------~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~-~--~~~ 226 (281)
T 3s55_A 165 -----------NF-AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVF---GTMRPDL-E--KPT 226 (281)
T ss_dssp -----------CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHH---HC----------CC
T ss_pred -----------CC-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhh---ccccccc-c--ccc
Confidence 11 45689999999987743322 233344444443332211000000 0000000 0 000
Q ss_pred chHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 560 RNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
..-........ ...+..+.+.+|+|+++++++... . +..+++.+|..++
T Consensus 227 ~~~~~~~~~~~--~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 227 LKDVESVFASL--HLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHHHHH--CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhHHHHHHHhh--hccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 00000000000 011134599999999999999754 2 4589998886654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-15 Score=152.08 Aligned_cols=171 Identities=17% Similarity=0.098 Sum_probs=126.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccC-CC----CCCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNL-HP----SRASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l-~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
+++||||||+|+||++++++|+++ |++|+.+.|+.... ..... .. .....++.++.+|+.|.+++..++..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 468999999999999999999999 78888777643211 11000 00 01124688999999999999888753
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|+|||+||..... ...++....+++|+.++.++++++ ++.+ ..+||++||...+...
T Consensus 80 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~--------- 149 (327)
T 1jtv_A 80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL--------- 149 (327)
T ss_dssp TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC---------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCC---------
Confidence 2699999999975422 122345678899999999999986 3334 6899999997765321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPN 199 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 199 (684)
.....|+.+|...|.+.+.++.+ +++++++++||.|..+.
T Consensus 150 -----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 -----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 12357999999999999888765 58999999999998764
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=9.6e-15 Score=145.04 Aligned_cols=195 Identities=14% Similarity=0.066 Sum_probs=129.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++||
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 91 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDN 91 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 489999999999999999999999977 45678999999999888754 6899999
Q ss_pred cceecCCCC---ccccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 426 AAGITGRPN---VDWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 426 ~a~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+||...... .+.+.+.....+++|+.++.++++++ .+.+ .++|++||...+.+ ..
T Consensus 92 nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~~ 154 (271)
T 3tzq_B 92 NAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------------YD 154 (271)
T ss_dssp CCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------------CS
T ss_pred CCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------------CC
Confidence 999762101 13344566789999999999999999 4444 37999999866531 11
Q ss_pred CCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
+...|+.||...+.+...... +..+...++..+.++...... ...+..... ..
T Consensus 155 -~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~------------------~~~~~~~~~-~~-- 212 (271)
T 3tzq_B 155 -MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL------------------PQPIVDIFA-TH-- 212 (271)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---------------------CHHHHHHHH-TT--
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC------------------CHHHHHHHH-hc--
Confidence 456899999999877433222 233333333322211100000 001100000 00
Q ss_pred cccCCCccchhhHHHHHHHHHhcC---c-cceeEecCC
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNP 606 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~ 606 (684)
.....+.+.+|+|+++++++... . +..+++.+|
T Consensus 213 -~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 213 -HLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp -STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 00113488999999999998754 3 448888777
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.2e-15 Score=146.48 Aligned_cols=207 Identities=14% Similarity=0.058 Sum_probs=131.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++.+++.. ++|
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 101 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999876 34678999999998888753 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------C-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------N-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
++||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+.+
T Consensus 102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------- 166 (277)
T 2rhc_B 102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG--------------- 166 (277)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC---------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC---------------
Confidence 9999999752111 12234455788999999999999998654 3 47999999864421
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. +...|+.+|...+.+..... .+..+...++..+.+........... . ..+. ....+......
T Consensus 167 --~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~-----~~~~--~~~~~~~~~~~ 235 (277)
T 2rhc_B 167 --VV-HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYS-D-----IWEV--STEEAFDRITA 235 (277)
T ss_dssp --CT-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHH-H-----HHTC--CHHHHHHHHHH
T ss_pred --CC-CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcc-c-----cccc--chHHHHHHHHh
Confidence 11 44689999999987743321 23344445555443332111100000 0 0000 00000000000
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPG 607 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~ 607 (684)
. . ....+++.+|+|++++.++... ..| .|++.+|.
T Consensus 236 ~---~-p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 236 R---V-PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp H---S-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred c---C-CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 0 0 0113499999999999998754 334 88887763
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.3e-15 Score=145.76 Aligned_cols=207 Identities=12% Similarity=0.052 Sum_probs=131.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3479999999999999999999999876 46778999999998888765 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH------cC-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE------KN-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~------~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~--------------- 168 (279)
T 3sju_A 104 ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG--------------- 168 (279)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC---------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC---------------
Confidence 9999999763211 1233445567889999999999998865 33 37999999865521
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. +...|+.+|...+.+..... .+..+...++..+.++.......... ..++. ...+....+..
T Consensus 169 --~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~------~~~~~--~~~~~~~~~~~ 237 (279)
T 3sju_A 169 --VM-YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYA------RHWGV--TEQEVHERFNA 237 (279)
T ss_dssp --CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCC------SSSCC--CHHHHHHHHHT
T ss_pred --CC-CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhh------hcccC--ChHHHHHHHHh
Confidence 11 44689999999887733222 23334444444333222111100000 00000 00011000000
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
. .....+.+.+|+|++++.++... . +..+++.+|.
T Consensus 238 -~---~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 238 -K---IPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp -T---CTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred -c---CCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 0 00113489999999999998754 3 4488887764
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.57 E-value=7.8e-15 Score=143.64 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=99.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 89 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVN 89 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 489999999999999999999999977 45778999999999888754 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+ .. +
T Consensus 90 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~~-~ 151 (248)
T 3op4_A 90 NAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-----------------NA-G 151 (248)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------------CT-T
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------------CC-C
Confidence 999763211 1234556678999999999999999864 33 47999999865521 11 4
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.||...+.+.
T Consensus 152 ~~~Y~asK~a~~~l~ 166 (248)
T 3op4_A 152 QANYAAAKAGVIGFT 166 (248)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 578999999888773
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.8e-15 Score=148.96 Aligned_cols=222 Identities=9% Similarity=0.047 Sum_probs=137.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------------eeeccCCChhHHHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------------FGTGRLEDKNSLLDDM 415 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~d~~d~~~~~~~~ 415 (684)
+++|||||+|+||.+++++|+++|++|. ++.+|++|.+++.+++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 4899999999999999999999998773 3567999999998888
Q ss_pred Hhc-----CCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCC
Q 035631 416 KRV-----RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSS 487 (684)
Q Consensus 416 ~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~ 487 (684)
+.. ++|++||+||..... ...+.+.....+++|+.++.++++++... +.++|++||...+.+....+
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~---- 165 (287)
T 3pxx_A 91 ANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP---- 165 (287)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred HHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc----
Confidence 754 689999999976322 22445677889999999999999999875 34799999987665332222
Q ss_pred CCCccCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhh-hhhhccccccceecCCCCCch
Q 035631 488 IGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAY-ENVCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 488 ~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 561 (684)
..+..+.. +...|+.+|...+.+...... +..+...++..+.++...... ........ ......+
T Consensus 166 --~~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~------~~~~~~~ 236 (287)
T 3pxx_A 166 --GAGGPQGP-GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDL------EAPSRAD 236 (287)
T ss_dssp -------CHH-HHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTS------SSCCHHH
T ss_pred --cccccCCC-ccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhcccc------ccchhHH
Confidence 22222222 456799999999887433222 233333444433221110000 00000000 0000000
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
..... ......+..+.+.+|+|+++++++... . +.++++.+|..++
T Consensus 237 ~~~~~---~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 237 ALLAF---PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHHHG---GGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHhhh---hhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 00000 000011134599999999999998643 3 4489998876543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=141.14 Aligned_cols=193 Identities=12% Similarity=0.062 Sum_probs=126.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccC--CChhHHHHHHHhc-----
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRL--EDKNSLLDDMKRV----- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~--~d~~~~~~~~~~~----- 418 (684)
.+++|||||+|+||.++++.|+++|++| .++.+|+ +|.+++.++++..
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999976 3566888 8888888887754
Q ss_pred CCCeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 419 RPTHVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 419 ~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
++|++||+||.... +..+...+.....+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------- 157 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-------------- 157 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS--------------
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc--------------
Confidence 68999999997421 222334455578899999999999999853 33 4799999986542
Q ss_pred cCCCCCCCCChhhhhhHhHhhhhhHHhhhh----hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLSYLEIFVL----VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
+.. +...|+.||...+.+........ .+....+..+.+...... ........+
T Consensus 158 ---~~~-~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~--------------~~~~~~~~~----- 214 (252)
T 3f1l_A 158 ---GRA-NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA--------------FPTEDPQKL----- 214 (252)
T ss_dssp ---CCT-TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHH--------------CTTCCGGGS-----
T ss_pred ---CCC-CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhh--------------CCccchhcc-----
Confidence 111 44689999999987743322221 111122221111100000 000111234
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccHH
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISHN 612 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~~ 612 (684)
...+|+++++++++... . +..+++.+|...++.
T Consensus 215 ------------~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 215 ------------KTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp ------------BCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred ------------CCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 88999999999998754 3 448999888766654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.57 E-value=9.5e-15 Score=143.66 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=129.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3589999999999999999999999876 35678999999999888763 5799
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC--CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
|||+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 149 (251)
T 1zk4_A 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------------- 149 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC----------------
Confidence 999999652111 122345557889999998887777654 344 369999998766311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-------hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-------FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
. +...|+.+|...|.+..... .+..+...++..+.+..... ..... ...........+.+
T Consensus 150 -~-~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~----~~~~~~~~~~~~~~------ 216 (251)
T 1zk4_A 150 -P-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAE----EAMSQRTKTPMGHI------ 216 (251)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHH----HHHTSTTTCTTSSC------
T ss_pred -C-CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchh----hhHHHhhcCCCCCC------
Confidence 1 45689999999987743221 23344445554443322111 00000 00000000111233
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
++.+|++++++.++... . +..|++.+|..
T Consensus 217 -----------~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 217 -----------GEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp -----------BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -----------cCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 99999999999998754 2 44888887753
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=144.17 Aligned_cols=194 Identities=14% Similarity=0.045 Sum_probs=130.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999876 45778999999999888765 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----c-CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----K-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||...... .+...+.....+++|+.++.++++++.. . ..++|++||...+.+.
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 172 (269)
T 4dmm_A 109 VLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN---------------- 172 (269)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------------
Confidence 9999999763211 1233456678999999999999999853 2 3479999998655311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. ....|+.||...+.+...... +..+...++..+.+... .......+..
T Consensus 173 -~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------------------~~~~~~~~~~- 226 (269)
T 4dmm_A 173 -P-GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT-----------------------SELAAEKLLE- 226 (269)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS-----------------------CHHHHHHHGG-
T ss_pred -C-CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc-----------------------ccccHHHHHh-
Confidence 1 346899999988877333222 22333333332221110 0110000000
Q ss_pred cccccC-CCccchhhHHHHHHHHHhcC----c-cceeEecCCCccc
Q 035631 571 KVVNIP-NSMTVLDEMLPIAIEMARRN----C-RGAWNFTNPGVIS 610 (684)
Q Consensus 571 ~~~~~~-~~~i~v~D~~~~~~~~~~~~----~-~g~~ni~~~~~~s 610 (684)
..+ ..+.+.+|+|++++.++..+ . +..+++.+|..+|
T Consensus 227 ---~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 227 ---VIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp ---GCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred ---cCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 001 13489999999999999762 2 4489998876543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=145.07 Aligned_cols=204 Identities=12% Similarity=-0.020 Sum_probs=133.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 88 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT 88 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999876 45778999999999888754 6899
Q ss_pred EEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||..+. +..+.+.+.....+++|+.++.++++++... +.++|++||...+.. +
T Consensus 89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~ 152 (280)
T 3tox_A 89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------------G 152 (280)
T ss_dssp EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------------C
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------------C
Confidence 9999996521 1123345667789999999999999998643 237999999865510 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.||...+.+...... +..+...++..+.++....... +. ...... .+...
T Consensus 153 ~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------------~~---~~~~~~-~~~~~ 215 (280)
T 3tox_A 153 FA-GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLP------------GA---APETRG-FVEGL 215 (280)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGST------------TC---CTHHHH-HHHTT
T ss_pred CC-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcc------------cc---CHHHHH-HHhcc
Confidence 11 456899999999877433222 2233333333222111000000 00 001100 00000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccH
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISH 611 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~ 611 (684)
.....+.+.+|+|++++.++... .+.++++.+|..++.
T Consensus 216 ---~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 216 ---HALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp ---STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred ---CccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 00113489999999999999754 345899988876654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.9e-15 Score=146.12 Aligned_cols=126 Identities=16% Similarity=0.071 Sum_probs=98.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------------eeeccCCChhHHHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------------FGTGRLEDKNSLLDDM 415 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~d~~d~~~~~~~~ 415 (684)
+++|||||+|+||.+++++|+++|++|. ++.+|++|.+++.+++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 4899999999999999999999998763 3568999999999888
Q ss_pred Hhc-----CCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCC
Q 035631 416 KRV-----RPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQ 484 (684)
Q Consensus 416 ~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~ 484 (684)
+.. ++|++||+||... .....+.....+++|+.++.++++++... +.++|++||...+.+...
T Consensus 94 ~~~~~~~g~id~lv~nAg~~~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--- 167 (278)
T 3sx2_A 94 QAGLDELGRLDIVVANAGIAP---MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS--- 167 (278)
T ss_dssp HHHHHHHCCCCEEEECCCCCC---CSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC---
T ss_pred HHHHHHcCCCCEEEECCCCCC---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc---
Confidence 754 6899999999762 22245677789999999999999998642 347999999875531110
Q ss_pred CCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 485 GSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 485 ~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. +...|+.||...+.+.
T Consensus 168 ----------~~~-~~~~Y~asKaa~~~~~ 186 (278)
T 3sx2_A 168 ----------ADP-GSVGYVAAKHGVVGLM 186 (278)
T ss_dssp ----------SSH-HHHHHHHHHHHHHHHH
T ss_pred ----------CCC-CchHhHHHHHHHHHHH
Confidence 111 3467999999998774
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-14 Score=139.21 Aligned_cols=222 Identities=13% Similarity=0.065 Sum_probs=154.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+|.+|||||++-||+++++.|+++ |.+|++.+|+.. .+..... ....+...+++|+.|.++++++++. .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~--~l~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKD--VLDAAIA-EIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-HcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999 899999999742 2221111 1134678899999999988776532 3
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||...+-.. .
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~--------------~ 168 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT--------------P 168 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC--------------T
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC--------------C
Confidence 79999999997543 2233456778899999999999888642 123589999997654211 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC---CC--hHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP---EK--LIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
....|+.+|.....+.+.++.++ ++++..+.||.+-.+.... .. --..+.......-|+. -+.
T Consensus 169 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g 239 (273)
T 4fgs_A 169 AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RVG 239 (273)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SCB
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CCc
Confidence 23479999999999999888775 7889999999987653210 00 0112223332222221 235
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+|+|.+++.++... ..|+.+.+-+|-
T Consensus 240 ~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 240 RAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 6799999999999643 367888887664
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.5e-15 Score=143.43 Aligned_cols=195 Identities=11% Similarity=0.027 Sum_probs=125.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe-------------------------e-eeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE-------------------------F-GTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~-------------------------~-~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
++||||||+|+||.+++++|+++|++|. . +.+|++|.++++++++.. ++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 4899999999999999999999998762 2 667999999998887643 57
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHH----HHcCC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVC----KEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|+|||+||...... .+...+.....+++|+.++.++++++ ++.+. ++|++||...+.+.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 146 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN--------------- 146 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC---------------
Confidence 99999999662111 12334566788999999966665554 44554 79999998644211
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
. +...|+.+|...+.+..... .+..+...++..+.+..... ... .+.......
T Consensus 147 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~------------------~~~~~~~~~ 204 (245)
T 2ph3_A 147 --P-GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQ------------------EVKEAYLKQ 204 (245)
T ss_dssp --S-SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCH------------------HHHHHHHHT
T ss_pred --C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCH------------------HHHHHHHhc
Confidence 1 34689999999887733221 13344445554443222110 000 010000000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
. ....+++++|+|++++.++..+ . +..|++.++.
T Consensus 205 ~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 205 I----PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp C----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred C----CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 0 0113489999999999998754 2 4488887763
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.2e-15 Score=144.88 Aligned_cols=128 Identities=12% Similarity=0.053 Sum_probs=99.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 88 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIH 88 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 489999999999999999999999876 45678999999999888754 679
Q ss_pred eEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
++||+||.... +-.+...+.....+++|+.++.++++++... +.++|++||...+.. +.
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~ 152 (259)
T 3edm_A 89 GLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------------GG 152 (259)
T ss_dssp EEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------------CS
T ss_pred EEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------------CC
Confidence 99999985511 1112334555788999999999999999875 337999999876510 11
Q ss_pred CCCCChhhhhhHhHhhhhhH
Q 035631 497 NFTRSFYSKTKAMVTFLSYL 516 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~ 516 (684)
. +...|+.||...+.+...
T Consensus 153 ~-~~~~Y~asKaa~~~l~~~ 171 (259)
T 3edm_A 153 P-GALAYATSKGAVMTFTRG 171 (259)
T ss_dssp T-TCHHHHHHHHHHHHHHHH
T ss_pred C-CcHHHHHHHHHHHHHHHH
Confidence 1 446899999999887433
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-13 Score=134.97 Aligned_cols=214 Identities=16% Similarity=0.204 Sum_probs=148.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++-||+++++.|+++ |.+|++.+|+.. ........+++|+.+.+++..+++.
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~----------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARP----------EGLPEELFVEADLTTKEGCAIVAEATRQRL 76 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCC----------TTSCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCch----------hCCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 899999999642 1112345789999999987766532
Q ss_pred CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~--------- 146 (261)
T 4h15_A 77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPL--------- 146 (261)
T ss_dssp SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---------
T ss_pred CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCC---------
Confidence 379999999996432 22334566788999999988877664 334 5799999997653211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH--------------HHHHHHHcCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIP--------------KFILLAMKGQ 217 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~--------------~~~~~~~~~~ 217 (684)
+.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ..+.. .+.......-
T Consensus 147 ----~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (261)
T 4h15_A 147 ----PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEAS--VRLAERLAKQAGTDLEGGKKIIMDGLGGI 220 (261)
T ss_dssp ----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcch--hhhhHHHHHhhccchhhHHHHHHHHhcCC
Confidence 112356999999999998888766 489999999998864421 00110 1111111111
Q ss_pred ceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 218 QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 218 ~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
++ .-+...+|+|++++.++... ..|+.+.+-+|-
T Consensus 221 --Pl-------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 221 --PL-------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp --TT-------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --CC-------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 11 13467899999999988542 367888887663
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=140.63 Aligned_cols=193 Identities=11% Similarity=-0.013 Sum_probs=130.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv 86 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLV 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999976 35678999999999888743 579999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+. .
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~- 148 (260)
T 1nff_A 87 NNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------------V- 148 (260)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------------T-
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------------C-
Confidence 9999762111 123345667899999999977666654 344 479999998766311 1
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+...|+.+|...+.+..... .+..+...++..+.++... ... . .+ . ....+.+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~---~--~~--~--~~~~~~~----------- 206 (260)
T 1nff_A 149 ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP---E--DI--F--QTALGRA----------- 206 (260)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC---T--TC--S--CCSSSSC-----------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch---h--hH--H--hCccCCC-----------
Confidence 44689999999988743321 2334444555433322110 000 0 00 0 0011233
Q ss_pred ccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
++.+|+|++++.++... . +..|++.+|...
T Consensus 207 ------~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 207 ------AEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp ------BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ------CCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 89999999999998654 2 448998887543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.3e-15 Score=142.86 Aligned_cols=207 Identities=10% Similarity=0.083 Sum_probs=132.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHh-cCCeE--------------eeeeccCCChhHHHHHHHhc---CCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKD-KGIAF--------------EFGTGRLEDKNSLLDDMKRV---RPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~-~g~~v--------------~~~~~d~~d~~~~~~~~~~~---~~d~Vih~a~~~~~ 432 (684)
++++|||||+|+||.+++++|++ .|+.| .++.+|++|.+++.++++.. ++|++||+||....
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~ 83 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIK 83 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCC
Confidence 35899999999999999999999 78765 56788999999999888643 57999999997621
Q ss_pred -CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 433 -PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 433 -~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
+..+...+.....+++|+.++.++++++... +.++|++||...+.+ .. +...|+.||.
T Consensus 84 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------------~~-~~~~Y~asKa 145 (244)
T 4e4y_A 84 GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------------KP-NSFAYTLSKG 145 (244)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------------CT-TBHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------------CC-CCchhHHHHH
Confidence 1123345566788999999999999999865 236999999866531 11 4468999999
Q ss_pred hHhhhhhHH-----hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC-CCccch
Q 035631 509 MVTFLSYLE-----IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP-NSMTVL 582 (684)
Q Consensus 509 ~~E~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~i~v 582 (684)
..+.+.... ..+..+...++..+.++........... .. +....++.... ....+ ..+.+.
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~-------~~~~~~~~~~~-----~~~~p~~r~~~p 212 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYAN-NV-------GISFDEAQKQE-----EKEFPLNRIAQP 212 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHH-HH-------TCCHHHHHHHH-----HTTSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhh-hc-------CCCHHHHHHHH-----hhcCCCCCCcCH
Confidence 999874322 2233444444444433221111110000 00 00000000000 00001 134899
Q ss_pred hhHHHHHHHHHhcC----ccceeEecCCCc
Q 035631 583 DEMLPIAIEMARRN----CRGAWNFTNPGV 608 (684)
Q Consensus 583 ~D~~~~~~~~~~~~----~~g~~ni~~~~~ 608 (684)
+|+|+++++++... .+..+++.+|..
T Consensus 213 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 213 QEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 99999999999754 344888877643
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-14 Score=143.56 Aligned_cols=198 Identities=18% Similarity=0.071 Sum_probs=132.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999866 45778999999998888765 789
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||...... .+.+.+.....+++|+.++.++++++. +.+ .++|++||...+. . +
T Consensus 122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~--~--------------~ 185 (293)
T 3rih_A 122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV--T--------------G 185 (293)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT--B--------------B
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc--C--------------C
Confidence 9999999762211 133456667899999999999999984 333 4799999975320 0 0
Q ss_pred CCCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
.. +...|+.||...+.+..... .+..+...++..+.++....... ++...+....
T Consensus 186 ~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-------------------~~~~~~~~~~ 245 (293)
T 3rih_A 186 YP-GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE-------------------EYISGMARSI 245 (293)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH-------------------HHHHHHHTTS
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH-------------------HHHHHHHhcC
Confidence 11 44689999999987733221 23344445555443332211110 1111111000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
.-..+...+|+++++++++... . +.++++.+|..+
T Consensus 246 ----p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 246 ----PMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred ----CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 0012378899999999998644 3 448888877654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=144.89 Aligned_cols=126 Identities=14% Similarity=0.106 Sum_probs=98.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 109 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLS 109 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999999866 46778999999998888754 689
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||....... +...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 110 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 172 (271)
T 4iin_A 110 YLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG----------------- 172 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------------
T ss_pred EEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------------
Confidence 99999997632111 233456678899999999999888864 23 47999999865531
Q ss_pred CCCCCChhhhhhHhHhhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~ 515 (684)
.. +...|+.+|...+.+..
T Consensus 173 ~~-~~~~Y~asK~a~~~~~~ 191 (271)
T 4iin_A 173 NM-GQTNYSASKGGMIAMSK 191 (271)
T ss_dssp CT-TCHHHHHHHHHHHHHHH
T ss_pred CC-CchHhHHHHHHHHHHHH
Confidence 11 45789999999987743
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-14 Score=139.54 Aligned_cols=206 Identities=13% Similarity=0.048 Sum_probs=127.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEe--------------eeeccCCChhHHHHHHHhc-----CCCeEEEcceecC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------FGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG 431 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 431 (684)
.+++|||||+|+||.+++++|+++|++|. ++.+|++|.+++.++++.. ++|++||+||...
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR 86 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 35899999999999999999999999873 3568999999999888754 6799999999752
Q ss_pred CC-CccccccchhhHhhhchhhhHHHHHHHH----Hc-CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 432 RP-NVDWCESHRVETIRTNVMGTLTLADVCK----EK-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 432 ~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
.. ..+...+.....+++|+.++.++++++. +. ..++|++||...+. +.. +...|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~~~-~~~~Y~~ 148 (250)
T 2fwm_X 87 MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------------PRI-GMSAYGA 148 (250)
T ss_dssp CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------------CCT-TCHHHHH
T ss_pred CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------------CCC-CCchHHH
Confidence 11 1123445677899999999999999984 33 35799999986652 111 4568999
Q ss_pred hhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC-CCc
Q 035631 506 TKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP-NSM 579 (684)
Q Consensus 506 sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 579 (684)
+|...+.+..... .+..+...++..+.++........ ... .. ..+ ...... .....+ ..+
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~-~~--------~~~-~~~~~~-~~~~~p~~~~ 214 (250)
T 2fwm_X 149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS---DDA-EE--------QRI-RGFGEQ-FKLGIPLGKI 214 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC---hhH-HH--------HHH-hhhhhc-ccccCCCCCC
Confidence 9999998743321 234444455554433221110000 000 00 000 000000 000001 134
Q ss_pred cchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 580 TVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
.+.+|+|++++.++... . +..+++.+|..
T Consensus 215 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 215 ARPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp -CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 89999999999998754 3 44788877643
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=143.27 Aligned_cols=195 Identities=15% Similarity=0.065 Sum_probs=125.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 107 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN 107 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 589999999999999999999999866 56779999999999888754 6799999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+ .. +
T Consensus 108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------------~~-~ 169 (266)
T 3grp_A 108 NAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-----------------NP-G 169 (266)
T ss_dssp CCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------------C
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-----------------CC-C
Confidence 999762111 1233456678899999997777776653 33 37999999865521 11 4
Q ss_pred CChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
...|+.+|...+.+..... .+..+...++..+.+.......... ...+......+.
T Consensus 170 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~------~~~~~~~~p~~r------------- 230 (266)
T 3grp_A 170 QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQ------KEAIMAMIPMKR------------- 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHH------HHHHHTTCTTCS-------------
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHH------HHHHHhcCCCCC-------------
Confidence 4689999998887733222 2233333444433222111000000 000001111123
Q ss_pred cCCCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
+.+.+|+|+++++++... .+..+++.+|.
T Consensus 231 ----~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 231 ----MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp ----CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ----CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 388999999999998654 34488887764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-15 Score=147.64 Aligned_cols=207 Identities=10% Similarity=-0.064 Sum_probs=133.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++.+++.. ++|++||
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHI 88 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 589999999999999999999999876 56788999999998887654 6799999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
+||...... .+...+.....+++|+.++.++++++... +.++|++||...+.+ .. +..
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~-~~~ 150 (255)
T 4eso_A 89 NAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------------HP-GMS 150 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------------CT-TBH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------------CC-Cch
Confidence 999762111 12345566788999999999999999864 347999999865531 11 456
Q ss_pred hhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccC
Q 035631 502 FYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIP 576 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (684)
.|+.||...+.+...... +..+...++..+.++.. .......................
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------------~~~~~~~~~~~~~~~~~~~~~p~ 213 (255)
T 4eso_A 151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTK-----------------GVAGITEAERAEFKTLGDNITPM 213 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSST-----------------TCTTSCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccc-----------------ccccCChhhHHHHHHHHhccCCC
Confidence 899999999877433222 22233333332211100 00000000000000000000111
Q ss_pred CCccchhhHHHHHHHHHhcC--c-cceeEecCCCcccHHH
Q 035631 577 NSMTVLDEMLPIAIEMARRN--C-RGAWNFTNPGVISHNE 613 (684)
Q Consensus 577 ~~~i~v~D~~~~~~~~~~~~--~-~g~~ni~~~~~~s~~e 613 (684)
..+.+.+|+|+++++++... . +..+++.+|...++.+
T Consensus 214 ~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 214 KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence 24478999999999988643 3 4489998887665543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=143.75 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=99.9
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++|++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34579999999999999999999999977 45778999999999988755 68999
Q ss_pred EEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc-------CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 424 LNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK-------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 424 ih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
||+||.... +-.+...+.....+++|+.++.++++++... +.++|++||...+.
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------------- 169 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----------------- 169 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------------
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------------
Confidence 999997521 1223345566789999999999998887643 24799999986542
Q ss_pred CCCCCCChhhhhhHhHhhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLSY 515 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~ 515 (684)
+.. +...|+.||...+.+..
T Consensus 170 ~~~-~~~~Y~asKaa~~~l~~ 189 (272)
T 4dyv_A 170 PRP-YSAPYTATKHAITGLTK 189 (272)
T ss_dssp CCT-TCHHHHHHHHHHHHHHH
T ss_pred CCC-CchHHHHHHHHHHHHHH
Confidence 111 45689999999988743
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=145.75 Aligned_cols=199 Identities=12% Similarity=0.033 Sum_probs=126.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 113 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTID 113 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999876 35678999999998888763 479
Q ss_pred eEEEcceecCC-CC-c-cccccchhhHhhhchhh----hHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGITGR-PN-V-DWCESHRVETIRTNVMG----TLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~~~-~~-~-~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
+|||+||.... .. . ....+.....+++|+.+ ++.+++.+.+.+ .++|++||...+.+.
T Consensus 114 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 179 (279)
T 3ctm_A 114 VFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN-------------- 179 (279)
T ss_dssp EEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---------------
T ss_pred EEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC--------------
Confidence 99999997621 11 1 23345566789999999 556667776655 479999998654210
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhhhh----hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIFVL----VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
... +...|+.+|...|.+........ .+...++..+.+... . . ....+.......
T Consensus 180 -~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~-----~------------~--~~~~~~~~~~~~ 238 (279)
T 3ctm_A 180 -IPQ-LQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDIT-----D------------F--ASKDMKAKWWQL 238 (279)
T ss_dssp ---C-CHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTT-----S------------S--CCHHHHHHHHHH
T ss_pred -CCC-CcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccc-----c------------c--cChHHHHHHHHh
Confidence 112 55789999999998743322221 222233321111100 0 0 000111111000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
. ....+++.+|+|++++.++... . +..+++.+|..
T Consensus 239 ---~-p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 239 ---T-PLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp ---S-TTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred ---C-CccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 0 0124599999999999998753 3 34888877643
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=9.8e-15 Score=145.50 Aligned_cols=203 Identities=10% Similarity=-0.015 Sum_probs=133.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 106 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRI 106 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999866 46778999999998888755 68
Q ss_pred CeEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH-----cCCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE-----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~-----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||+||..... ..+...+.....+++|+.++.++++++.. .+.++|++||...+.+.
T Consensus 107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 171 (277)
T 4fc7_A 107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ--------------- 171 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC---------------
T ss_pred CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------------
Confidence 9999999965211 12334566778999999999999999853 23479999998655311
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
. ....|+.||...+.+...... +..+...++..+.+......... ...........
T Consensus 172 --~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------------~~~~~~~~~~~ 232 (277)
T 4fc7_A 172 --A-LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG----------------PQASLSTKVTA 232 (277)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC----------------CHHHHHHHHHT
T ss_pred --C-CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC----------------CHHHHHHHhcc
Confidence 1 346899999999877433222 23333344433322111110000 00110000000
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccH
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISH 611 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~ 611 (684)
..-..+.+.+|+++++++++... . +..+++.+|..+++
T Consensus 233 ----~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 233 ----SPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp ----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred ----CCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence 00013489999999999999743 3 44888888765543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=147.98 Aligned_cols=264 Identities=16% Similarity=0.098 Sum_probs=166.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCc-------ccccccCCCCCCCCCceEEEecCCCHHHHHHhh
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY-------CSSLKNLHPSRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~-------~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+.+++||||||+|+||+++++.|+++ |++|++.++... ......+.......+ ....+|+.+.+.+..++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVEAGEKLV 83 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGGGHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHHHHHHHH
Confidence 45689999999999999999999999 899999876321 011100000000001 12358999987655443
Q ss_pred c----c-CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCccc-ccCCCCC
Q 035631 83 V----S-EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEV-YGETDME 148 (684)
Q Consensus 83 ~----~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~v-yg~~~~~ 148 (684)
. . .++|+|||+||..... ...++++..+++|+.++.++.+++ ++.+ ..+||++||... ++..
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~--- 159 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF--- 159 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC---
Confidence 2 1 3799999999976432 233456678899999999888887 3344 589999999644 4321
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCC
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
+...|+.+|...+.+.+.++.+ +++++.+++||.+ .+.. ....+.
T Consensus 160 ------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~--~~~~~~----------------- 207 (319)
T 1gz6_A 160 ------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT--ETVMPE----------------- 207 (319)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT--GGGSCH-----------------
T ss_pred ------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc--cccCCh-----------------
Confidence 2357999999999999888766 4899999999986 3211 000000
Q ss_pred CceEecccHHHHHHHHHHHHhcC--CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHH
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG--VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL 303 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~ 303 (684)
....++..+|+|.+++.++..+ ..++.|++.++...... +...............|.+..
T Consensus 208 -~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 269 (319)
T 1gz6_A 208 -DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR-----------------WERTLGAIVRKRNQPMTPEAV 269 (319)
T ss_dssp -HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEE-----------------EEECCCEECCBTTBCCCHHHH
T ss_pred -hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEe-----------------eeeccceeccCCCCCCCHHHH
Confidence 1113467899999999888653 35778888766321100 000000000001112333332
Q ss_pred H-------h-cCCcccCCHHHHHHHHHHHHHhCCC
Q 035631 304 K-------R-LGWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 304 ~-------~-lg~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
+ + .|+....++.+.++++++++.+.+.
T Consensus 270 ~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (319)
T 1gz6_A 270 RDNWVKICDFSNASKPKSIQESTGGIIEVLHKIDS 304 (319)
T ss_dssp HHTHHHHTCCTTCBCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhhccccccCCCchHHHHHHHHHHHhhccc
Confidence 2 2 4665557899999999998877663
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-15 Score=146.15 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=99.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. +
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 44589999999999999999999999876 45778999999998888754 6
Q ss_pred CCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH-----H-cCCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 420 PTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK-----E-KNVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~-~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
+|++||+||...... .+...+.....+++|+.++.++++++. + .+.++|++||...+.+.
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 171 (267)
T 4iiu_A 105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN------------- 171 (267)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-------------
T ss_pred ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-------------
Confidence 899999999763211 123456677899999999999999874 2 33479999998655311
Q ss_pred CCCCCCCCChhhhhhHhHhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. +...|+.+|...+.+.
T Consensus 172 ----~-~~~~Y~asKaa~~~~~ 188 (267)
T 4iiu_A 172 ----R-GQVNYSAAKAGIIGAT 188 (267)
T ss_dssp ----T-TCHHHHHHHHHHHHHH
T ss_pred ----C-CCchhHHHHHHHHHHH
Confidence 1 4468999999887663
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=142.43 Aligned_cols=199 Identities=15% Similarity=0.055 Sum_probs=131.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999866 46778999999998888754 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+||...... .+...+.....+++|+.++.++++++... +.++|++||...+.+
T Consensus 101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 164 (266)
T 4egf_A 101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP---------------- 164 (266)
T ss_dssp EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------------
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC----------------
Confidence 9999999763211 12334556688999999999999998643 347999999866531
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.. +...|+.+|...+.+...... +..+...++..+.++......... ............+
T Consensus 165 -~~-~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~p~~--------- 229 (266)
T 4egf_A 165 -LP-DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE----AKSAPMIARIPLG--------- 229 (266)
T ss_dssp -CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH----HHHHHHHTTCTTS---------
T ss_pred -CC-CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh----HHHHHHHhcCCCC---------
Confidence 11 446899999999877332222 233333444433322211100000 0000000000111
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
.+.+.+|+|+++++++... . +..+++.+|..+
T Consensus 230 --------r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 230 --------RFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --------CCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 3388999999999998754 3 448998877543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=144.46 Aligned_cols=200 Identities=12% Similarity=0.071 Sum_probs=131.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI 106 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 489999999999999999999999876 46778999999999888754 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+||...... .+...+.....+++|+.++.++++++... + .++|++||...+. +.
T Consensus 107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------------~~ 169 (271)
T 4ibo_A 107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------------AR 169 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------BC
T ss_pred EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------------CC
Confidence 999999762211 12344566788999999999998887653 3 3799999975442 11
Q ss_pred CCCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK 571 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 571 (684)
. +...|+.+|...+.+..... .+..+...++..+.++........ ..+.......
T Consensus 170 ~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~~~-- 229 (271)
T 4ibo_A 170 A-TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN-----------------PEFDAWVKAR-- 229 (271)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC-----------------HHHHHHHHHH--
T ss_pred C-CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC-----------------HHHHHHHHhc--
Confidence 1 45689999999987743322 223333333333322111000000 0000000000
Q ss_pred ccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 572 VVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 572 ~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
.....+.+.+|+++++++++... . +..+++.+|...+
T Consensus 230 --~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 230 --TPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp --STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred --CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 00113488999999999998744 3 4489998876544
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.9e-15 Score=148.82 Aligned_cols=209 Identities=11% Similarity=0.083 Sum_probs=139.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe----------------------------------eeeccCCChhHHHHHHHh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE----------------------------------FGTGRLEDKNSLLDDMKR 417 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~----------------------------------~~~~d~~d~~~~~~~~~~ 417 (684)
+++|||||+|+||.++++.|+++|++|. ++.+|++|.+++.++++.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 107 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT 107 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4799999999999999999999998763 345789999999888875
Q ss_pred c-----CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----------CCeEEEEecceeeecCC
Q 035631 418 V-----RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----------NVLLMNFATGCIYEYDS 480 (684)
Q Consensus 418 ~-----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----------~~~~i~~SS~~vy~~~~ 480 (684)
. ++|++||+||...... .+...+.....+++|+.++.++++++... +.++|++||...+.+.
T Consensus 108 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~- 186 (322)
T 3qlj_A 108 AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS- 186 (322)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB-
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC-
Confidence 4 6899999999763211 12344566789999999999999988643 1479999998665311
Q ss_pred CCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhh---hhhh--hhhhhhhhHHHHHHhhhhhhccccccceecC
Q 035631 481 MHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFV---LVIC--IECLINFQVEGLLKAYENVCTLRLRMPISSD 555 (684)
Q Consensus 481 ~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 555 (684)
. ....|+.||...+.+....... .++. ..++. +. .... ..........
T Consensus 187 ----------------~-~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~--------t~~~-~~~~~~~~~~ 239 (322)
T 3qlj_A 187 ----------------V-GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-AR--------TRMT-ETVFAEMMAT 239 (322)
T ss_dssp ----------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TT--------SCCS-CCSCCC----
T ss_pred ----------------C-CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CC--------Cccc-hhhhhhhhhc
Confidence 1 3468999999998774332222 2222 22221 10 0000 0000000000
Q ss_pred CCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcc-----------------cHHHH
Q 035631 556 LSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVI-----------------SHNEI 614 (684)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~-----------------s~~e~ 614 (684)
..... .++..+|+++++++++... .+..|++.+|... ++.|+
T Consensus 240 ~~~~~-----------------~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el 302 (322)
T 3qlj_A 240 QDQDF-----------------DAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAEL 302 (322)
T ss_dssp ----C-----------------CTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGH
T ss_pred ccccc-----------------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHH
Confidence 00111 2378999999999998644 3448888877654 77999
Q ss_pred HHHHHhhcCCc
Q 035631 615 LELYKEYIDPQ 625 (684)
Q Consensus 615 ~~~i~~~~g~~ 625 (684)
++.+.+.++.+
T Consensus 303 ~~~~~~~~~~~ 313 (322)
T 3qlj_A 303 GPVVADLLGKA 313 (322)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHhhcc
Confidence 99999988743
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=143.66 Aligned_cols=196 Identities=13% Similarity=0.069 Sum_probs=127.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.++||||||+|+||.++++.|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999999999999866 35668999999999888653 579
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+.
T Consensus 124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 187 (285)
T 2c07_A 124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------- 187 (285)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------------
Confidence 9999999762111 1234456678899999998888888763 34 479999998655311
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...+.+...... +..+...++..+.+..... .. ..+.......
T Consensus 188 -~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~------------------~~~~~~~~~~- 245 (285)
T 2c07_A 188 -V-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-IS------------------EQIKKNIISN- 245 (285)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CC------------------HHHHHHHHTT-
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cC------------------HHHHHHHHhh-
Confidence 1 346899999999877332221 2333334443322111000 00 0010000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG 607 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~ 607 (684)
.+ ...+++.+|+|++++.++... .+..|++.+|.
T Consensus 246 --~~-~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 246 --IP-AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp --CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred --CC-CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 00 013499999999999998754 23488887764
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=5e-15 Score=146.96 Aligned_cols=202 Identities=14% Similarity=0.109 Sum_probs=130.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 87 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999876 24568999999999888764 68
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHH----HHHc----CCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADV----CKEK----NVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
|++||+||.. ........+++|+.++..+.++ +++. +.++|++||...+.+.
T Consensus 88 d~lv~~Ag~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 147 (267)
T 2gdz_A 88 DILVNNAGVN-------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------- 147 (267)
T ss_dssp CEEEECCCCC-------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-------------
T ss_pred CEEEECCCCC-------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-------------
Confidence 9999999965 1345678899999976655544 4443 2469999998766311
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhH-----Hh--hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYL-----EI--FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
. +...|+.+|...+.+... +. .+..+...++..+.++.... .... ...+. ...+...
T Consensus 148 ----~-~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~-------~~~~~---~~~~~~~ 211 (267)
T 2gdz_A 148 ----A-QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE-------ENMGQ---YIEYKDH 211 (267)
T ss_dssp ----T-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH-------HHHGG---GGGGHHH
T ss_pred ----C-CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc-------cccch---hhhHHHH
Confidence 1 346899999999877432 11 22334444444333221110 0000 00000 0000000
Q ss_pred hhhcccccccC-CCccchhhHHHHHHHHHhcC--ccceeEecCCCcccHHHH
Q 035631 566 LARYNKVVNIP-NSMTVLDEMLPIAIEMARRN--CRGAWNFTNPGVISHNEI 614 (684)
Q Consensus 566 ~~~~~~~~~~~-~~~i~v~D~~~~~~~~~~~~--~~g~~ni~~~~~~s~~e~ 614 (684)
.. ...+ ..+++.+|+|++++.++... .+.+|++.+++.+++.|+
T Consensus 212 ~~-----~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 212 IK-----DMIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp HH-----HHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred HH-----HHhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 00 0001 13489999999999999865 445999999888777654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.9e-14 Score=140.84 Aligned_cols=201 Identities=9% Similarity=-0.019 Sum_probs=132.2
Q ss_pred eEEEEEcCC--cchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKT--GWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~--G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+ |+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999 999999999999999876 24567999999998888754 579
Q ss_pred eEEEcceecCC-----CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGITGR-----PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
++||+||.... +-.+...+.....+++|+.++.++++++... +.++|++||...+.+
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------- 153 (261)
T 2wyu_A 89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------------- 153 (261)
T ss_dssp EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------------
T ss_pred EEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC---------------
Confidence 99999996521 1113345566789999999999999999875 347999999765421
Q ss_pred CCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. +...|+.||...+.+...... +..+...++..+.+..... . .....+...+..
T Consensus 154 --~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~----------------~~~~~~~~~~~~ 213 (261)
T 2wyu_A 154 --VP-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS-I----------------PGFTKMYDRVAQ 213 (261)
T ss_dssp --CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG-C----------------TTHHHHHHHHHH
T ss_pred --CC-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh-c----------------cccHHHHHHHHh
Confidence 11 346799999999877433221 2333334444332211000 0 000011111110
Q ss_pred cccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccH
Q 035631 569 YNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISH 611 (684)
Q Consensus 569 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~ 611 (684)
. . ....+.+.+|+|++++.++... . +..|++.+|..++.
T Consensus 214 ~---~-p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 214 T---A-PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp H---S-TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred c---C-CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 0 0 0113489999999999998643 2 44899988766553
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=5.6e-14 Score=137.47 Aligned_cols=126 Identities=17% Similarity=0.108 Sum_probs=98.7
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCC-------eE------------------------eeeeccCCChhHHHHHHHhc-
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGI-------AF------------------------EFGTGRLEDKNSLLDDMKRV- 418 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~-------~v------------------------~~~~~d~~d~~~~~~~~~~~- 418 (684)
.++||||||+|+||.+++++|+++|+ +| .++.+|++|.+++..+++..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 35899999999999999999999998 65 35678999999998888753
Q ss_pred ----CCCeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCC
Q 035631 419 ----RPTHVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSI 488 (684)
Q Consensus 419 ----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~ 488 (684)
++|+|||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------- 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC----------
Confidence 5799999999762111 1233456678899999999999999854 33 47999999876631
Q ss_pred CCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 489 GFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 489 ~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. +...|+.+|...+.+.
T Consensus 152 -------~~-~~~~Y~~sK~a~~~~~ 169 (244)
T 2bd0_A 152 -------FR-HSSIYCMSKFGQRGLV 169 (244)
T ss_dssp -------CT-TCHHHHHHHHHHHHHH
T ss_pred -------CC-CCchhHHHHHHHHHHH
Confidence 11 4578999999998774
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=142.71 Aligned_cols=206 Identities=8% Similarity=-0.041 Sum_probs=136.4
Q ss_pred ceEEEEEcCC--cchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKT--GWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~--G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++||||||+ |+||.+++++|+++|++| .++.+|++|.+++..+++.+ ++
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 93 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL 93 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4589999998 999999999999999976 45789999999999988765 68
Q ss_pred CeEEEcceecCC-----CCcc-ccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 421 THVLNAAGITGR-----PNVD-WCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 421 d~Vih~a~~~~~-----~~~~-~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
|++||+||.... +..+ ...++....+++|+.++.++++++... +.++|++||...+.+
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------- 160 (271)
T 3ek2_A 94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA------------- 160 (271)
T ss_dssp EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------------
T ss_pred CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-------------
Confidence 999999997621 1112 445667789999999999999999875 347999999865531
Q ss_pred cCCCCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
.. +...|+.+|...+.+...... +..+...++..+.+..... ... ...+....
T Consensus 161 ----~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~----------------~~~~~~~~ 218 (271)
T 3ek2_A 161 ----IP-NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG-IKS----------------FGKILDFV 218 (271)
T ss_dssp ----CT-TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC-CHH----------------HHHHHHHH
T ss_pred ----CC-CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc-ccc----------------hHHHHHHH
Confidence 11 456899999999877433222 2223333333222110000 000 00000000
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcccHHHHH
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVISHNEIL 615 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s~~e~~ 615 (684)
.. ......+...+|+|+++++++... . +..+++.+|..+++.+++
T Consensus 219 ~~----~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~ 267 (271)
T 3ek2_A 219 ES----NSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA 267 (271)
T ss_dssp HH----HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred Hh----cCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence 00 000113488999999999999753 3 448999998877766554
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=145.26 Aligned_cols=126 Identities=12% Similarity=0.014 Sum_probs=99.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 3589999999999999999999999876 46779999999999888754 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 111 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 173 (301)
T 3tjr_A 111 VVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV----------------- 173 (301)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------------
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------------
Confidence 9999999762111 1334556678999999999999999854 23 4799999986552
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. +...|+.||...+.+.
T Consensus 174 ~~~-~~~~Y~asKaa~~~~~ 192 (301)
T 3tjr_A 174 PNA-GLGTYGVAKYGVVGLA 192 (301)
T ss_dssp CCT-TBHHHHHHHHHHHHHH
T ss_pred CCC-CchHHHHHHHHHHHHH
Confidence 111 4568999999988773
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.2e-14 Score=137.80 Aligned_cols=196 Identities=11% Similarity=-0.034 Sum_probs=128.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++|
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 84 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV 84 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999976 34668999999998888743 679999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHH----HHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVC----KEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|+||...... .+...+.....+++|+.++..+++++ ++.+ .++|++||...+.+ ..
T Consensus 85 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~- 146 (254)
T 1hdc_A 85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------------LA- 146 (254)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------CT-
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------------CC-
Confidence 9999762111 12334566788999999998655554 4444 47999999866531 11
Q ss_pred CCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 499 TRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+...|+.+|...+.+..... .+..+...++..+.++.... ... .....+. .......+
T Consensus 147 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~----~~~~~~~-~~~p~~~~----------- 209 (254)
T 1hdc_A 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-TGI----RQGEGNY-PNTPMGRV----------- 209 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-HTC----CCSTTSC-TTSTTSSC-----------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-cch----hHHHHHH-hcCCCCCC-----------
Confidence 44689999999987743322 23344445555443332111 000 0000000 00001123
Q ss_pred ccCCCcc-chhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 574 NIPNSMT-VLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 574 ~~~~~~i-~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
. +.+|+|++++.++... . +..+++.+|.
T Consensus 210 ------~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 242 (254)
T 1hdc_A 210 ------GNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp ------B-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred ------CCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence 7 9999999999998754 3 3478887764
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-14 Score=137.47 Aligned_cols=201 Identities=9% Similarity=0.049 Sum_probs=131.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999876 45779999999999888765 689
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH-----c-CCeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE-----K-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~-----~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+||..... ..+...+.....+++|+.++.++++++.. . +.++|++||...+.+
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 149 (257)
T 3imf_A 86 ILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA---------------- 149 (257)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC----------------
Confidence 999999965211 12333456678999999999999999843 2 347999999865521
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHh------hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEI------FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
.. ....|+.||...+.+..... .+..+...++..+.+...... ..........+
T Consensus 150 -~~-~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~------------~~~~~~~~~~~------ 209 (257)
T 3imf_A 150 -GP-GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK------------LWISEEMAKRT------ 209 (257)
T ss_dssp -CT-TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------------------CCSHHH------
T ss_pred -CC-CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh------------cccCHHHHHHH------
Confidence 11 44689999999987733221 123333333332211100000 00000000000
Q ss_pred cccccccC-CCccchhhHHHHHHHHHhcC----ccceeEecCCCccc
Q 035631 569 YNKVVNIP-NSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVIS 610 (684)
Q Consensus 569 ~~~~~~~~-~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s 610 (684)
....+ ..+.+.+|+|++++.++... .+..+++.+|..++
T Consensus 210 ---~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 210 ---IQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp ---HTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred ---HhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 00011 14589999999999998754 34488888876543
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=141.46 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=99.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 479999999999999999999999876 45778999999998888754 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
++||+||...... .+.+.+.....+++|+.++.++++++... +.++|++||+.... .+..
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------------~~~~ 175 (271)
T 3v2g_A 112 ILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------------VPWP 175 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------------CCST
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------------CCCC
Confidence 9999999762211 12344566788999999999999999875 44799998863321 0111
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.+|...+.+.
T Consensus 176 -~~~~Y~asKaa~~~l~ 191 (271)
T 3v2g_A 176 -GISLYSASKAALAGLT 191 (271)
T ss_dssp -TCHHHHHHHHHHHHHH
T ss_pred -CchHHHHHHHHHHHHH
Confidence 4578999999998774
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-14 Score=140.96 Aligned_cols=196 Identities=14% Similarity=0.070 Sum_probs=128.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999976 45778999999999988855 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||+||...... .+...+.....+++|+.++.++++++... +.++|++||...+... .
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------------~ 177 (276)
T 3r1i_A 113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------------I 177 (276)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------C
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------------C
Confidence 999999763211 12234455677899999999999998753 2469999998644211 1
Q ss_pred CCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
+. +...|+.||...+.+...... +..+...++..+.++.... .. ++......
T Consensus 178 ~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~~-------------------~~~~~~~~-- 234 (276)
T 3r1i_A 178 PQ-QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-LA-------------------DYHALWEP-- 234 (276)
T ss_dssp SS-CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-GG-------------------GGHHHHGG--
T ss_pred CC-CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-ch-------------------HHHHHHHh--
Confidence 11 456899999999887433222 2233333333222111000 00 00000000
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCC
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPG 607 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~ 607 (684)
.. ....+.+.+|+|+++++++... ..| ++++.+|.
T Consensus 235 -~~-p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 235 -KI-PLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp -GS-TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -cC-CCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence 00 0013489999999999998754 344 88887764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=141.61 Aligned_cols=198 Identities=14% Similarity=0.085 Sum_probs=130.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++..+++.. ++
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 92 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEI 92 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4589999999999999999999999876 45678999999998888755 67
Q ss_pred CeEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||+||...... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 156 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG---------------- 156 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS----------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC----------------
Confidence 99999999762111 1234456678999999998888887743 34 47999999865521
Q ss_pred CCCCCCChhhhhhHhHhhhhhHHhh-----hhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 495 EPNFTRSFYSKTKAMVTFLSYLEIF-----VLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
.. +...|+.+|...+.+...... +..+...++..+.+....... .++...+...
T Consensus 157 -~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~~~ 215 (256)
T 3ezl_A 157 -QF-GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-------------------PDVLEKIVAT 215 (256)
T ss_dssp -CS-CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-------------------HHHHHHHHHH
T ss_pred -CC-CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC-------------------HHHHHHHHhc
Confidence 11 457899999998877433222 222333333322211110000 0111111110
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCcc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVI 609 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~ 609 (684)
. ....+.+.+|+++++++++... . +..+++.+|..+
T Consensus 216 ~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 216 I----PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp S----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred C----CCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 0 0113488999999999998643 3 448998877543
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=144.11 Aligned_cols=205 Identities=12% Similarity=0.041 Sum_probs=133.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++||
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 109 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVA 109 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999976 45778999999998888765 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+.+.+.....+++|+.++.++++++.. .+ .++|++||...+. +.. +
T Consensus 110 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------------~~~-~ 171 (277)
T 3gvc_A 110 NAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------------AVG-G 171 (277)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------------CCT-T
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------------CCC-C
Confidence 999762111 1334566778999999999999999864 22 3699999985542 111 4
Q ss_pred CChhhhhhHhHhhhhhH---Hh--hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYL---EI--FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
...|+.+|...+.+... +. .+..+...++..+.++.......... . .. ......... ..
T Consensus 172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~-~-----~~--~~~~~~~~~--------~~ 235 (277)
T 3gvc_A 172 TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFD-G-----AL--GAGGARSMI--------AR 235 (277)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC--------------CCHHHHH--------HH
T ss_pred chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcch-h-----hH--HHHhhhhhh--------hc
Confidence 57899999999877432 21 23344445554443332211110000 0 00 000000000 00
Q ss_pred cCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCccc
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGVIS 610 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~~s 610 (684)
....+.+.+|+|++++.++... . +.++++.+|...+
T Consensus 236 ~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 236 LQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred cccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 0013489999999999998654 3 4489988876543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.1e-14 Score=138.49 Aligned_cols=203 Identities=14% Similarity=0.082 Sum_probs=131.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGIT 430 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~ 430 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.+ ++|++||+||..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~ 85 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFV 85 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccC
Confidence 3589999999999999999999999876 24568999999998877665 689999999976
Q ss_pred CCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhh
Q 035631 431 GRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYS 504 (684)
Q Consensus 431 ~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~ 504 (684)
.... .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. +. +...|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~-~~~~Y~ 148 (246)
T 2ag5_A 86 HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------------VV-NRCVYS 148 (246)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------------CT-TBHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------------CC-CCccHH
Confidence 2111 1223455667889999999999999863 33 479999998654211 11 346899
Q ss_pred hhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 505 KTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 505 ~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+|...+.+..... .+..+...++..+.++......... .....+...+... . ....+
T Consensus 149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~~~~~~---~-~~~~~ 211 (246)
T 2ag5_A 149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR-------------GNPEEARNDFLKR---Q-KTGRF 211 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS-------------SSHHHHHHHHHHT---C-TTSSC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcc-------------cCcHHHHHHHHhc---C-CCCCC
Confidence 99999987743322 2344555555544433221111000 0000110011000 0 00134
Q ss_pred cchhhHHHHHHHHHhcC---c-cceeEecCCC
Q 035631 580 TVLDEMLPIAIEMARRN---C-RGAWNFTNPG 607 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~ 607 (684)
.+.+|+|+++++++... . +..+++.+|.
T Consensus 212 ~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 212 ATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp EEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 89999999999998643 3 3478887663
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.5e-14 Score=141.19 Aligned_cols=202 Identities=11% Similarity=-0.009 Sum_probs=129.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHh------cCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKR------VRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~------~~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++. -++|
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 589999999999999999999999876 3467899999999888753 3689
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||..... ..+...+.....+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------- 165 (273)
T 1ae1_A 102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------------- 165 (273)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC----------------
Confidence 999999975211 1123345667888999999999999985 333 479999998776411
Q ss_pred CCCCCChhhhhhHhHhhhhhHH---h--hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcc
Q 035631 496 PNFTRSFYSKTKAMVTFLSYLE---I--FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYN 570 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 570 (684)
. +...|+.+|...+.+.... . .+..+...++..+.++........ .+ ....+.......
T Consensus 166 -~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------------~~-~~~~~~~~~~~~- 229 (273)
T 1ae1_A 166 -P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKK------------NP-HQKEEIDNFIVK- 229 (273)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CHHHHHHHHHH-
T ss_pred -C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhc------------cc-CcHHHHHHHHhc-
Confidence 1 4468999999998773322 1 233444445443332211100000 00 000111111110
Q ss_pred cccccCCCccchhhHHHHHHHHHhcC---c-cceeEecCCCc
Q 035631 571 KVVNIPNSMTVLDEMLPIAIEMARRN---C-RGAWNFTNPGV 608 (684)
Q Consensus 571 ~~~~~~~~~i~v~D~~~~~~~~~~~~---~-~g~~ni~~~~~ 608 (684)
.+ -..+.+.+|+|++++.++... . +..+++.+|..
T Consensus 230 --~p-~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 230 --TP-MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp --ST-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CC-CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 00 113589999999999998643 3 44888877643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-14 Score=140.97 Aligned_cols=207 Identities=15% Similarity=0.091 Sum_probs=134.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 88 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 88 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3589999999999999999999999976 35678999999999888754 6899999
Q ss_pred cceecCC--CCccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||.... +..+...+.....+++|+.++.++++++.. .+.++|++||...+.+. . .
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~-~ 150 (270)
T 1yde_A 89 NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------------A-Q 150 (270)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------------T-T
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----------------C-C
Confidence 9996521 111223345678899999999999999864 34589999998543211 1 3
Q ss_pred CChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
...|+.+|...+.+..... .+..+...++..+.++.... .... .......+.... ...+
T Consensus 151 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~-~~~~------------~~~~~~~~~~~~---~~~p 214 (270)
T 1yde_A 151 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE-LAAL------------MPDPRASIREGM---LAQP 214 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-HHTT------------SSSHHHHHHHHH---HTST
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh-hhhc------------ccchHHHHHHHh---hcCC
Confidence 3689999999998743322 23444455555444332111 0000 000000000000 0000
Q ss_pred cCCCccchhhHHHHHHHHHhcC--ccc-eeEecCCCcccHH
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN--CRG-AWNFTNPGVISHN 612 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~--~~g-~~ni~~~~~~s~~ 612 (684)
-..+...+|++++++.++... ..| .+++.+|..+...
T Consensus 215 -~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~ 254 (270)
T 1yde_A 215 -LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG 254 (270)
T ss_dssp -TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred -CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence 013488999999999988643 344 8898888666543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.2e-14 Score=136.92 Aligned_cols=198 Identities=13% Similarity=0.046 Sum_probs=126.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL 86 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3589999999999999999999999876 23567999999998887643 67999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
||+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+ ..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~ 149 (249)
T 2ew8_A 87 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------------IE 149 (249)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------------CS
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------------CC
Confidence 99999762111 123345567889999999988888853 444 47999999876631 11
Q ss_pred CCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
+...|+.+|...+.+..... .+..+...++..+.+.......... . . ++....
T Consensus 150 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~-----~----~~~~~~------ 207 (249)
T 2ew8_A 150 -AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA------M-----F----DVLPNM------ 207 (249)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------------------CT------
T ss_pred -CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc------h-----h----hHHHHh------
Confidence 44689999999987743322 2333444444433322111000000 0 0 000000
Q ss_pred cccCCCccchhhHHHHHHHHHhcC---ccc-eeEecCCC
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPG 607 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~ 607 (684)
......+.+.+|+|+++++++... ..| .+++.+|.
T Consensus 208 ~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 208 LQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp TSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred hCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 000013489999999999998643 334 78877663
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.8e-14 Score=136.95 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=96.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
.++||||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3479999999999999999999999976 35678999999998888754 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++.++++.+. +.+. ++|++||...+.+ .. +
T Consensus 85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------~~-~ 146 (234)
T 2ehd_A 85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------------FK-G 146 (234)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------------CT-T
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------------CC-C
Confidence 999652111 122345667889999999987666654 4443 6999999865531 11 4
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...+.+.
T Consensus 147 ~~~Y~~sK~a~~~~~ 161 (234)
T 2ehd_A 147 GAAYNASKFGLLGLA 161 (234)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHH
Confidence 568999999888773
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=139.63 Aligned_cols=197 Identities=14% Similarity=0.087 Sum_probs=129.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
.+++|||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|++|
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 85 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILV 85 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3589999999999999999999999876 46778999999999888754 689999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHH----HcC--CeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCK----EKN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
|+||...... .+...+.....+++|+.++.++++++. +.+ .++|++||...+.+. .
T Consensus 86 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~ 148 (247)
T 3rwb_A 86 NNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----------------P 148 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----------------T
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----------------C
Confidence 9999762111 123345667899999999999999854 434 479999998765311 1
Q ss_pred CCCChhhhhhHhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 498 FTRSFYSKTKAMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
+...|+.+|...+.+..... .+..+...++..+.++......... ...+....
T Consensus 149 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---------------~~~~~~~~------ 206 (247)
T 3rwb_A 149 -NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE---------------AFGFVEML------ 206 (247)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG---------------GHHHHHHH------
T ss_pred -CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH---------------HHHHHhcc------
Confidence 34689999999887733222 2333334444433322211100000 00000000
Q ss_pred cccCCCccchhhHHHHHHHHHhcC---cc-ceeEecCCC
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN---CR-GAWNFTNPG 607 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~---~~-g~~ni~~~~ 607 (684)
..-..+...+|+++++.+++... .. ..+++.+|.
T Consensus 207 -~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 207 -QAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp -SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred -cccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 00012378999999999998754 33 488887663
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.7e-14 Score=138.79 Aligned_cols=196 Identities=11% Similarity=0.060 Sum_probs=128.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee-------------eeccCCChhHHHHHHHhc-----CCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF-------------GTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~-------------~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~~~ 433 (684)
+++|||||+|+||.+++++|+++|++|.. +.+|++|.++++++++.. ++|++||+||.....
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~ 95 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA 95 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC--
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 58999999999999999999999998832 568999999998888754 679999999975211
Q ss_pred C-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhh
Q 035631 434 N-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507 (684)
Q Consensus 434 ~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK 507 (684)
. .+...+.....+++|+.++.++++++.. .+ .++|++||...+.+. . +...|+.+|
T Consensus 96 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~-~~~~Y~~sK 157 (247)
T 1uzm_A 96 FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------------G-NQANYAASK 157 (247)
T ss_dssp ---CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------------C-CChhHHHHH
Confidence 1 1334456778999999999999998864 33 479999998654210 1 346899999
Q ss_pred HhHhhhhhHHh-----hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccch
Q 035631 508 AMVTFLSYLEI-----FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVL 582 (684)
Q Consensus 508 ~~~E~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v 582 (684)
...+.+..... .+..+...++..+.+.... .... .+...... ..+ ...+++.
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~------------------~~~~~~~~---~~p-~~~~~~~ 214 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDE------------------RIQQGALQ---FIP-AKRVGTP 214 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCH------------------HHHHHHGG---GCT-TCSCBCH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-hcCH------------------HHHHHHHh---cCC-CCCCcCH
Confidence 98887733221 2333444444433222111 0000 00000000 000 0134899
Q ss_pred hhHHHHHHHHHhcC---ccc-eeEecCCCc
Q 035631 583 DEMLPIAIEMARRN---CRG-AWNFTNPGV 608 (684)
Q Consensus 583 ~D~~~~~~~~~~~~---~~g-~~ni~~~~~ 608 (684)
+|+|+++++++... ..| .+++.+|..
T Consensus 215 ~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 215 AEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 99999999998753 334 888877654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=141.81 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=99.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 98 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLD 98 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999876 45678999999999888765 789
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
++||+||...... .+...+.....+++|+.++.++++++... +.++|++||..... .+..
T Consensus 99 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~ 162 (270)
T 3is3_A 99 IAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------------FSVP 162 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------------CCCT
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------------CCCC
Confidence 9999999762211 12345667789999999999999999875 34799999974110 0111
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
+...|+.||...+.+.
T Consensus 163 -~~~~Y~asKaa~~~~~ 178 (270)
T 3is3_A 163 -KHSLYSGSKGAVDSFV 178 (270)
T ss_dssp -TCHHHHHHHHHHHHHH
T ss_pred -CCchhHHHHHHHHHHH
Confidence 4578999999998874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 684 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-99 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-12 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-85 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-82 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 4e-11 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-70 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-12 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-70 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-07 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-64 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-62 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 3e-59 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-04 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-58 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-57 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 3e-10 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-55 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-52 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 6e-52 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 4e-04 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 2e-51 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 2e-05 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 3e-48 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-42 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 3e-33 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 7e-29 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 2e-25 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-24 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 2e-18 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 2e-17 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-17 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 3e-16 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 4e-13 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 5e-12 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 5e-12 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-10 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 5e-07 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-06 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 3e-06 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 4e-06 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-05 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 4e-04 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 7e-04 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.001 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.001 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 0.001 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 0.002 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.002 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 0.002 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 0.002 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.004 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 0.004 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 308 bits (789), Expect = 1e-99
Identities = 137/345 (39%), Positives = 185/345 (53%), Gaps = 23/345 (6%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITG AGFIGS V +IKN D +V +DKL Y +L++L S + F DI
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG----- 128
+ + + D +MH AA++HVD S F NI GT+ LLE +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 129 ---QVKRFIHVSTDEVYGET-------DMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
RF H+STDEVYG+ + + E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTL------FKLEPEKTIHYVQDRPFN 292
A +++ G G YN+G E+ LDV IC L + I YV DRP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
D RY +D K+ R LGWK +E G++ T+EWY N W +V
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVK 345
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 65.5 bits (159), Expect = 5e-12
Identities = 51/352 (14%), Positives = 107/352 (30%), Gaps = 74/352 (21%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKG-------------------------IAFEFGTGRLED 407
K LI G G+IG + ++ + F + D
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 408 KNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE----- 462
+ ++ +P V++ A + VD + I TN++GT L +V ++
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESH---VDRSITGPAAFIETNIVGTYALLEVARKYWSAL 118
Query: 463 -----KNVLLMNFATGCIY---EYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL- 513
N + +T +Y + ++ + S YS +KA L
Sbjct: 119 GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178
Query: 514 -SYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLR-------MPISSDLSNPRNFVTK 565
++ + L + G E + L + +PI R++
Sbjct: 179 RAWRRTYGLPTIV--TNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW--- 233
Query: 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQ 625
+ V D + + + +N + +++ + +D
Sbjct: 234 -------------LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEI 280
Query: 626 LKWSNFNLEEQAKVLVAPRSNNH--MDVTKLKKEF---PEVLSIKDSIIKYV 672
+ + E+ V P + +D K+ +E P + + I K V
Sbjct: 281 VPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLE-TFESGIRKTV 331
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 268 bits (687), Expect = 3e-85
Identities = 121/324 (37%), Positives = 181/324 (55%), Gaps = 12/324 (3%)
Query: 14 KILITGAAGFIGSHVTNRLIKN----YPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
++L+TG AGFIGSH +L+ P E++ LD L Y + NL P A P +F+
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI D G+D I+HFAA++HVD S + FT N+ GT LL+ G
Sbjct: 62 GDIR--DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
R +HVST++VYG D E+S L P +PY+A+KAG++++ AYHR+YGL
Sbjct: 120 -GRVVHVSTNQVYGSID---SGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249
TR N YGP Q PEKLIP F+ + G LP++G+G+NVR +++ D ++L G
Sbjct: 176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235
Query: 250 IGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGW 308
G +Y++G E + ++ + + + V DR +D RY LD K++R LG+
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDSLGADWSS-VRKVADRKGHDLRYSLDGGKIERELGY 294
Query: 309 KEKTPWEEGLKLTLEWYKKNPHWW 332
+ + + +GL T+ WY++N WW
Sbjct: 295 RPQVSFADGLARTVRWYRENRGWW 318
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 262 bits (670), Expect = 1e-82
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 20/324 (6%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 58
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ +D I H A+ N N + N GT +L K G R
Sbjct: 59 VEPLYIE-------VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--AR 109
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 110 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 169
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 170 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS- 228
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LG 307
+ N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 286
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHW 331
W+ P EEGL + +++K +
Sbjct: 287 WEPVVPLEEGLNKAIHYFRKELEY 310
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 4e-11
Identities = 52/331 (15%), Positives = 112/331 (33%), Gaps = 63/331 (19%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKG----IAFEFGTGRLEDKNSLLD------------DMK 416
+ LI G G++G L G + F TGR + + +
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62
Query: 417 RVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIY 476
+ + + A + ++T++TN +GTL + + K L+ +T +Y
Sbjct: 63 YIEVDQIYHLASPAS---PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVY 119
Query: 477 EYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINFQVE 534
+HPQ S + P R+ Y + K + + +Y++ + + + F
Sbjct: 120 GDPEVHPQ--SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV--ARIFNTF 175
Query: 535 GLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA----- 589
G R+ M +S NF+ + + + + + S + ++
Sbjct: 176 G----------PRMHMNDGRVVS---NFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNG 221
Query: 590 -IEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNN- 647
+ + N N NP + E +L K + + ++ ++
Sbjct: 222 LVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI----------QFLSEAQDDP 271
Query: 648 ---HMDVTKLKKEF---PEVLSIKDSIIKYV 672
D+ K K P V +++ + K +
Sbjct: 272 QKRKPDIKKAKLMLGWEPVV-PLEEGLNKAI 301
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 231 bits (589), Expect = 2e-70
Identities = 78/361 (21%), Positives = 132/361 (36%), Gaps = 51/361 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-----HPSRASPNFKF 67
K LITG G GS++ L++ YE+ + + + + + P +P F
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 59
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
GD++ + +L D + + A +HV SF + + + GT LLEA +
Sbjct: 60 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119
Query: 128 G--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G + RF ST E+YG +I E + P +PY+ K A + + Y SYG+
Sbjct: 120 GLEKKTRFYQASTSELYGLVQ---EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176
Query: 186 PTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAF 241
N P + F + I + I +G + ++ GN ++R + + D +
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236
Query: 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-------------------------- 275
++L + + + T + SV
Sbjct: 237 WMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAP 295
Query: 276 KLEPEKTIHYV---QDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT----LEWYKK 327
++P I V RP D K LGWK + E + LE KK
Sbjct: 296 GVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 355
Query: 328 N 328
+
Sbjct: 356 H 356
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 66.0 bits (160), Expect = 3e-12
Identities = 63/361 (17%), Positives = 120/361 (33%), Gaps = 60/361 (16%)
Query: 358 FFLHNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKR 417
F L GYE+ G R T + + + F G L D ++L ++
Sbjct: 20 FLLEKGYEVHGIKRRAS--SFNTERVDHIY-QDPHTCNPKFHLHYGDLSDTSNLTRILRE 76
Query: 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCK----EKNVLLMNFATG 473
V+P V N ++ V T + MGTL L + + EK +T
Sbjct: 77 VQPDEVYNLGAMSH---VAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS 133
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINF 531
+Y P KE RS Y+ K ++ +Y E + + C I F
Sbjct: 134 ELYGLVQEIP------QKETTPFY-PRSPYAVAKLYAYWITVNYRESYGMYACN--GILF 184
Query: 532 QVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
E + V T ++ I++ + + + + + +
Sbjct: 185 NHESPRRGETFV-TRKITRAIANIAQGLESCLYLGNMDSLR-----DWGHAKDYVKMQWM 238
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL----------- 640
M ++ + S + +E+ + +L++ +EE+ V+
Sbjct: 239 MLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVK 298
Query: 641 -------VAPR-------SNNHMDVTKLKKEF---PEVLSIKDSI---IKYVLEPNKKKN 680
V PR D TK ++ PE+ ++++ + + LE KK+
Sbjct: 299 PGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEI-TLREMVSEMVANDLE-AAKKH 356
Query: 681 N 681
+
Sbjct: 357 S 357
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 229 bits (584), Expect = 8e-70
Identities = 115/331 (34%), Positives = 182/331 (54%), Gaps = 17/331 (5%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K I++TG AGFIGS+ + + N+PD + LDKL Y + NL + + + GDI
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDI 61
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A+L++ L + D I+H+AA++H DNS + F + N GT+ LLEA + R
Sbjct: 62 ADAELVDKL--AAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--KYDIR 117
Query: 133 FIHVSTDEVYGETDMESDIGNP---------EASQLLPTNPYSATKAGAEMLVMAYHRSY 183
F HVSTDEVYG+ + D+ + P++PYS+TKA ++++V A+ RS+
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
G+ + +N YGP Q EK IP+ I + G + ++G G NVR +++ D +
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL 303
IL +G +G Y +G E++ +V ++ +P+ +V DR +D RY +D KL
Sbjct: 238 ILTKGRMGETYLIGADGEKNNKEV-LELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKL 296
Query: 304 KR-LGWKEK-TPWEEGLKLTLEWYKKNPHWW 332
+ LGW + T + EGL+ T++WY N WW
Sbjct: 297 RDELGWTPQFTDFSEGLEETIQWYTDNQDWW 327
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 49/326 (15%), Positives = 103/326 (31%), Gaps = 40/326 (12%)
Query: 358 FFLHNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKR 417
+ +N ++ K G + +LG E G + D + +
Sbjct: 21 YVYNNHPDVHVTVLDKLTYAGNKANLEAILGDR-------VELVVGDIADAELVDKLAAK 73
Query: 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIY- 476
+ D + I TN +GT TL + ++ ++ + +T +Y
Sbjct: 74 ADAIVHY-----AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYG 128
Query: 477 -----EYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLI 529
E H +G F + N S YS TKA + +++ F + I
Sbjct: 129 DLPLREDLPGHGEGPGEKFTAETNYN-PSSPYSSTKAASDLIVKAWVRSFGVKATI--SN 185
Query: 530 NFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589
G + E ++ ++ K Y + N+ + + D +
Sbjct: 186 CSNNYGPYQHIEKFIPRQITNILAGI---------KPKLYGEGKNVRDWIHTNDHSTGVW 236
Query: 590 IEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHM 649
+ + + G ++ E+LEL E + + + L +
Sbjct: 237 AILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDL-----RYAI 291
Query: 650 DVTKLKKEF---PEVLSIKDSIIKYV 672
D +KL+ E P+ + + + +
Sbjct: 292 DASKLRDELGWTPQFTDFSEGLEETI 317
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 215 bits (547), Expect = 1e-64
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 30/344 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDI 72
++L+TG +G+IGSH +L++N ++++ LD L S+ + + F++GDI
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
LM +L IDT++HFA V S E+ +NN+ GT L+ A + VK
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKN 118
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT-TR 191
FI S+ VYG D P +PY +K E ++ ++ +I R
Sbjct: 119 FIFSSSATVYG--DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176
Query: 192 GNNVYGPN----------QFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYC 234
N G + P L+P +A+ + L I GN G+ VR Y++
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236
Query: 235 ADVAEAFDVILHRGVI---GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF 291
D+A+ V + + H+YN+G SVLDV H+ R
Sbjct: 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREG 294
Query: 292 NDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGD 334
+ Y+ D K R L W+ +E + T W ++P + D
Sbjct: 295 DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (533), Expect = 2e-62
Identities = 77/352 (21%), Positives = 131/352 (37%), Gaps = 41/352 (11%)
Query: 13 KKI-LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL------HPSRASPNF 65
+ + LITG G GS++ L++ YE+ + + + + + N
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 58
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
K GD+T + + ++ I + AQ+HV SF + + + GT LL+A K
Sbjct: 59 KLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 126 LTG--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
G +F ST E+YG+ +I E + P +PY A K A +V+ + +Y
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAM----KGQQLPIHGNGSNVRSYLYCADVAE 239
L + N P + + K + GN R + + D E
Sbjct: 176 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235
Query: 240 AFDVILHRGVIG-------HVYNVGTKKERSVLDVAADICTLFKLEPEK----------- 281
A ++L V++V E+S L + I K E E
Sbjct: 236 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 295
Query: 282 TIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT----LEWYKKN 328
T+ RP D K K+ L WK + ++E ++ +E + N
Sbjct: 296 TVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN 347
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (115), Expect = 1e-06
Identities = 62/349 (17%), Positives = 106/349 (30%), Gaps = 47/349 (13%)
Query: 358 FFLHNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKR 417
F L GYE+ G R TG I L + G L D L+ +
Sbjct: 20 FLLEKGYEVHGIVRRSS--SFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE 77
Query: 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATG 473
V+PT + N + + +V T + +GTL L D K +V +T
Sbjct: 78 VKPTEIYN---LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS 134
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINF 531
+Y P KE RS Y K ++ ++ E + L I F
Sbjct: 135 ELYGKVQEIP------QKETTPFY-PRSPYGAAKLYAYWIVVNFREAYNLFAVN--GILF 185
Query: 532 QVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
E + V R ++ + + + D + +
Sbjct: 186 NHESPRRGANFVTRKISRS-----VAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM-WL 239
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNN---- 647
M + + + V S E +E +I + W N E + + +
Sbjct: 240 MLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDL 299
Query: 648 -----------HMDVTKLKKEF---PEVLSIKDSIIKYVLEPNK--KKN 680
D TK K++ P V + + + + V + + N
Sbjct: 300 KYYRPTEVDFLQGDCTKAKQKLNWKPRV-AFDELVREMVHADVELMRTN 347
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 200 bits (510), Expect = 3e-59
Identities = 86/333 (25%), Positives = 138/333 (41%), Gaps = 23/333 (6%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-----LKNLHPSRASPNF 65
+PK LITG AGFIGS++ L+K D ++V LD +++L + NF
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF++GDI D N G+D ++H AA V S + NI G +L A +
Sbjct: 73 KFIQGDIRNLDDCNN--ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+ F + ++ YG+ + E + P +PY+ TK E+ + R YG
Sbjct: 131 DAKV-QSFTYAASSSTYGDHP---GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGF 186
Query: 186 PTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241
TI R NV+G Q P +IPK+ ++G + I+G+G R + Y + +A
Sbjct: 187 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 246
Query: 242 DVIL--HRGVIGHVYNVGTKKERSVLDVAADICTLF---KLEPEKTIHYVQDRPFNDHRY 296
+ VYN+ S+ + + + + Y R +
Sbjct: 247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHS 306
Query: 297 FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
D K + LG+ K G+ L + WY
Sbjct: 307 LADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 339
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 48/353 (13%), Positives = 100/353 (28%), Gaps = 50/353 (14%)
Query: 339 LCPHPSVILLTDSCG----NDDAFFLHNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDK 394
L P V L+T G N L ++ G L G + + + +
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVG---LDNFATGHQRNLDEVRSLVSEKQ 68
Query: 395 GIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTL 454
F+F G + + + + V A G +V + + + TN+ G L
Sbjct: 69 WSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALG-----SVPRSINDPITSNATNIDGFL 123
Query: 455 TLADVCKEKNVLLMNFA-TGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513
+ ++ V +A + Y P ED S Y+ TK +
Sbjct: 124 NMLIAARDAKVQSFTYAASSSTYGDHPGLP------KVEDTIGK-PLSPYAVTKYVNELY 176
Query: 514 --SYLEIFVL---------VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNF 562
+ + V N ++ + + + I+ D R+F
Sbjct: 177 ADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF 236
Query: 563 VTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYI 622
+ + +A +N G S N++ ++ +
Sbjct: 237 CY--------------IENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL 282
Query: 623 DPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEF---PEVLSIKDSIIKYV 672
+ + R ++ D++K K P+ + + +
Sbjct: 283 AENGVSYHREPVYRDFREGDVR-HSLADISKAAKLLGYAPKY-DVSAGVALAM 333
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 198 bits (504), Expect = 2e-58
Identities = 84/349 (24%), Positives = 134/349 (38%), Gaps = 34/349 (9%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-ASPNFKFLKGD 71
K +L+TG AG+IGSH LI+N Y+ V D L + + F + D
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVD 59
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ + + ID+++HFA V S + +NNI GT VLLE + V
Sbjct: 60 LCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVS 118
Query: 132 RFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS--YGLPTI 188
+F+ S+ VYG+ T + I PE L PTNPY TK E ++ + S
Sbjct: 119 KFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFA 178
Query: 189 TTRGNNVY----------GPNQFPEKLIPKFILLAM-KGQQLPIHGNGSNVRSYLYCADV 237
R N P P L+P +A+ + ++L I G+ + R D
Sbjct: 179 ILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238
Query: 238 AEAFDVILH-------------RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH 284
D+ + +N+G+ K +V +V C ++
Sbjct: 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP--YK 296
Query: 285 YVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
R + + KR L W+ + E+ K +W +NP +
Sbjct: 297 VTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGY 345
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 195 bits (497), Expect = 1e-57
Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 46/337 (13%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+++ I G G +GS + +L + + L D + ++
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNL 40
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQT-HVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ ++ SE ID + AA+ + + +F N+ ++ A V
Sbjct: 41 LDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VN 99
Query: 132 RFIHVSTDEVYGETD-MESDIGNPEASQLLPTN-PYSATKAGAEMLVMAYHRSYGLPTIT 189
+ + + + +Y + L PTN PY+ K L +Y+R YG +
Sbjct: 100 KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS 159
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAM---------KGQQLPIHGNGSNVRSYLYCADVAEA 240
N+YGP+ I + K + + G+G+ +R +L+ D+A A
Sbjct: 160 VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 219
Query: 241 FDVILHRG---------VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPF 291
++ + NVGT + ++ ++A I + + + + +P
Sbjct: 220 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPD 277
Query: 292 NDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
R LD +L +LGW + E GL T +W+ +N
Sbjct: 278 GTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 314
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 59.5 bits (143), Expect = 3e-10
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 370 SRLKFLIYGKTGWIGGLLGKYCKDKG----IAFEFGTGRLEDKNSLLDDMKRVRPTHVLN 425
++ + I G G +G + + + +G + L D ++ D R V
Sbjct: 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYL 60
Query: 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQ 484
AA G + ++ + I N+M + + +V L+ + CIY + P
Sbjct: 61 AAAKVG--GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPM 118
Query: 485 GSSIGFKEDDEPNFTRSFYSKTKAM 509
S + EP T Y+ K
Sbjct: 119 AESELLQGTLEP--TNEPYAIAKIA 141
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 190 bits (482), Expect = 2e-55
Identities = 68/323 (21%), Positives = 121/323 (37%), Gaps = 13/323 (4%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ L+TG G G+++ L++ Y + L + L + ++ GD+
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM 58
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A + ++ + + AAQ+ V S+ + G LLEA + R
Sbjct: 59 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 118
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F ST E++G E E + P +PY K + + Y S+GL +
Sbjct: 119 FYQASTSEMFGLIQAER---QDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175
Query: 193 NNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHRG 248
N P + F + + + G+Q + GN R + + D EA ++L +
Sbjct: 176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEK--TIHYVQDRPFNDHRYFLDDQKLKR- 305
Y V T +V D+ L+ I RP + K +R
Sbjct: 236 KADD-YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRV 294
Query: 306 LGWKEKTPWEEGLKLTLEWYKKN 328
LGWK +T +E +++ +E +
Sbjct: 295 LGWKPRTSLDELIRMMVEADLRR 317
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (460), Expect = 4e-52
Identities = 76/350 (21%), Positives = 125/350 (35%), Gaps = 36/350 (10%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-------ASPNF 65
+K+L+TG AG+IGSH L++ Y V +D P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
+F + DI + L ++HFA V S ++ N+ GT LLE K
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY-G 184
G S + D +P TNPY +K E ++ ++
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHP---TGGCTNPYGKSKFFIEEMIRDLCQADKT 177
Query: 185 LPTITTRGNNVYGPN----------QFPEKLIPKFILLAM-KGQQLPIHGN------GSN 227
+ R N G + P L+P +A+ + + L + GN G+
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 228 VRSYLYCADVAE---AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH 284
VR Y++ D+A+ A L +YN+GT SVL + + +
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YK 295
Query: 285 YVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
V R + + + + LGW + + W K+NP +G
Sbjct: 296 VVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 181 bits (458), Expect = 6e-52
Identities = 76/340 (22%), Positives = 135/340 (39%), Gaps = 30/340 (8%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+LITG GF+GS++ + + +++ D L + NLH + NF+F+ GDI
Sbjct: 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 59
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + L+ D+ H A Q + S N N+ GT LLEA +
Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 119
Query: 134 IHVSTDEVYG-------------ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH 180
I+ ST++VYG T ++ G E++QL +PY +K A+ ++ Y
Sbjct: 120 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179
Query: 181 RSYGLPTITTRGNNVYGPNQ--------FPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232
R +GL T+ R +++YG Q + + I GNG VR L
Sbjct: 180 RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 239
Query: 233 YCADVAEAFDVILHRG----VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD 288
+ D+ + L S+L++ + ++ +
Sbjct: 240 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPV 297
Query: 289 RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327
R + + D +K+ + W K ++G++ +W
Sbjct: 298 RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 40.9 bits (94), Expect = 4e-04
Identities = 47/341 (13%), Positives = 96/341 (28%), Gaps = 51/341 (14%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGI------------------------AFEFGTGRLEDK 408
K LI G G++G L + +GI FEF G + +K
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61
Query: 409 NSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVC--KEKNVL 466
N + + + P + AG + + + NV GTL L + N
Sbjct: 62 NDVTRLITKYMPDSCFHLAG---QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 467 LMNFATGCIYEYDSMHPQ----------GSSIGFKEDD--EPNFTRSFYSKTKAMVTFLS 514
++ +T +Y + G+ E + +
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 515 YLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574
+ + + + + + + F
Sbjct: 179 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238
Query: 575 IPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLE 634
+ + +A R T +S E+ +L ++Y + ++++N +
Sbjct: 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR 298
Query: 635 EQAKVLVAPRSNNHMDVTKLKKEF---PEVLSIKDSIIKYV 672
E + + D+ K+ P+V S KD + K
Sbjct: 299 E------SDQRVFVADIKKITNAIDWSPKV-SAKDGVQKMY 332
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 180 bits (457), Expect = 2e-51
Identities = 77/333 (23%), Positives = 135/333 (40%), Gaps = 26/333 (7%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ KI ITGA GFI SH+ RL + ++A D KN H + +F
Sbjct: 14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASD------WKKNEHMTEDMFCDEFHLV 65
Query: 71 DITCADLMNYLLVSEGIDTIM-HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+ + N L V+EG+D + A + N NN + ++EA ++ G
Sbjct: 66 DLR--VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING- 122
Query: 130 VKRFIHVSTDEVYGETD----MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+KRF + S+ +Y E + +A P + + K E L Y++ +G+
Sbjct: 123 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI 182
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH-----GNGSNVRSYLYCADVAEA 240
R +N+YGP + K + Q G+G RS+ + + E
Sbjct: 183 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300
+ L + N+G+ + S+ ++A + + + + IH++ R D+
Sbjct: 243 V-LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPGPEGVRGRN-SDN 298
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
+K LGW +EGL++T W K+
Sbjct: 299 NLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKE 331
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 48/341 (14%), Positives = 102/341 (29%), Gaps = 49/341 (14%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKG------------------IAFEFGTGRLEDKNSLLDD 414
K I G G+I + + K +G EF L + L
Sbjct: 17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV 76
Query: 415 MKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATG 473
+ V L A + + +S+ + N M + + + + + ++
Sbjct: 77 TEGVDHVFNLAAD----MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL--SYLEIFVLVICIECLINF 531
CIY + + D P + + K L Y + F + I N
Sbjct: 133 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNI 192
Query: 532 QVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
+ ++ S T +DE + +
Sbjct: 193 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG-------LQTRSFTFIDECVEGVLR 245
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651
+ + + R N + ++S NE+ E+ + + +L + E + + D
Sbjct: 246 LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNS-------DN 298
Query: 652 TKLKKEF---PEVLSIKDSIIKYV------LEPNKKKNNDM 683
+K++ P + +K+ + +E K K +D+
Sbjct: 299 NLIKEKLGWAPNM-RLKEGLRITYFWIKEQIEKEKAKGSDV 338
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 171 bits (432), Expect = 3e-48
Identities = 69/332 (20%), Positives = 114/332 (34%), Gaps = 14/332 (4%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP------NFK 66
K LITG G GS++T L+ YE+ L + + + ++ P K
Sbjct: 2 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK 59
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
D+T A + + D + + AAQ+HV SF + G LLEA +
Sbjct: 60 LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 119
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
E + E + P +PY+A+K A + Y +YGL
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 179
Query: 187 TITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPI-HGNGSNVRSYLYCADVAEAFD 242
N P + F + I + + G Q + GN R + + D EA
Sbjct: 180 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 239
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKTIHYVQDRPFNDHRYFLDDQ 301
++L + + + L + I RP D
Sbjct: 240 LMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDAS 299
Query: 302 KLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
K K LGWK + +E+ +K+ ++ +
Sbjct: 300 KAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 331
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 155 bits (391), Expect = 4e-42
Identities = 78/380 (20%), Positives = 135/380 (35%), Gaps = 66/380 (17%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR------------- 60
++L+ G AG+IGSH L+++ ++ +V +D L + +R
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 61 ----ASPNFKFLKGDITCADLMNYL-LVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY 115
A GD+ D +N + ID ++H A V S + ++ +NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 116 GTHVLLEACKLTGQVKRFIHVSTDEVYGET---DMESDIGNPEASQLLPTNPYSATKAGA 172
G LL+A L K S T + ++ P +PY +K A
Sbjct: 123 GILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIA 182
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ---------FPEKLIPKFI------------- 210
E ++ +YG+ I R N G ++ LIP +
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 211 ---LLAMKGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHRGV---------IGH 252
A +++PI G G+ VR Y++ D+A A + L
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311
V+N+GT + SV +V + R + K + LGWK K
Sbjct: 303 VFNLGTSRGYSVREVIEVARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPK 360
Query: 312 TPWEEGLKLT-LEWYKKNPH 330
E + T ++ + +P+
Sbjct: 361 YDTLEAIMETSWKFQRTHPN 380
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 129 bits (323), Expect = 3e-33
Identities = 68/335 (20%), Positives = 120/335 (35%), Gaps = 21/335 (6%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
++ K++ +TG GF G ++ L + +L S + R + +
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---RVADGMQSEI 62
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI + + + + + H AAQ V S+ E + N+ GT LLEA + G
Sbjct: 63 GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG 122
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR-------- 181
VK +++++D+ Y + EA +PYS +K AE++ +Y
Sbjct: 123 VKAVVNITSDKCYDNKEWIWGYRENEAMG--GYDPYSNSKGCAELVTSSYRNSFFNPANY 180
Query: 182 -SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
+G T R NV G + I IL A + Q I N +R + + +
Sbjct: 181 GQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT------IHYVQDRPFNDH 294
+ ++ + A + + + + P H
Sbjct: 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAH 300
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
LD K K LGW + L+ + W+K
Sbjct: 301 YLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 335
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 116 bits (289), Expect = 7e-29
Identities = 62/339 (18%), Positives = 101/339 (29%), Gaps = 28/339 (8%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
+ +L+TGA GF+ SHV +L+++ Y++ S L NL +
Sbjct: 6 AVLPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTA--RSASKLANLQKRWDAKYPG 61
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
+ + D++ E I A V + E I GT L A
Sbjct: 62 RFETAVV-EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAA 120
Query: 127 TGQVKRFIHVSTDEVYG-----------------ETDMESDIGNPEASQLLPTNPYSATK 169
T VKRF+ S+ ++ PE+ Y+A+K
Sbjct: 121 TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASK 180
Query: 170 AGAEMLVMAYHRSYGLPTI--TTRGNNVYGPNQFPEKL---IPKFILLAMKGQQLPIHGN 224
AE+ + N G PE +++ G+ P
Sbjct: 181 TEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LA 239
Query: 225 GSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIH 284
+ Y+ D+ L I GT V A L+ +
Sbjct: 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADF 299
Query: 285 YVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLE 323
Q + + + LK LG EE +K +
Sbjct: 300 PDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 106 bits (264), Expect = 2e-25
Identities = 55/371 (14%), Positives = 116/371 (31%), Gaps = 54/371 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP--------- 63
++++ G G+ G L K +YE+ +D L L +P
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59
Query: 64 --------NFKFLKGDITCADLMNYLL---VSEGIDTIMHFAAQTHVDNSFGNSFEFTNN 112
+ + GDI + + + + + + + +N
Sbjct: 60 RWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHN 119
Query: 113 NIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIG----------NPEASQLLPT 162
N+ GT +L A K G+ + + T YG +++ + G + +
Sbjct: 120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 179
Query: 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL----------------- 205
+ Y +K + +++G+ VYG ++
Sbjct: 180 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239
Query: 206 IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYN--VGTKKERS 263
+ +F + A G L ++G G R YL D + ++ + + ++ S
Sbjct: 240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 299
Query: 264 VLDVA---ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKL 320
V ++A + L+ +K +H Y KL LG + + L
Sbjct: 300 VNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDS 359
Query: 321 TLEWYKKNPHW 331
L + +
Sbjct: 360 LLNFAVQFKDR 370
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 103 bits (256), Expect = 1e-24
Identities = 61/343 (17%), Positives = 114/343 (33%), Gaps = 35/343 (10%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++LI G GFIG+H+T RL++ YE+ LD + P+F F++GDI+
Sbjct: 2 RVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSD-----AISRFLNHPHFHFVEGDIS 55
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
V + D ++ A N + ++ C + F
Sbjct: 56 IHSEWIEYHV-KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 114
Query: 134 IHV--STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT-- 189
+ E P YS +K + ++ AY GL
Sbjct: 115 PSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 174
Query: 190 ------TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-- 241
R +N+ + I + IL ++G + + G R + D EA
Sbjct: 175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234
Query: 242 -DVILHRGVIGHVYNVGTKKERS-VLDVAADICTLFKLEPEKT-------IHYVQDRPFN 292
G + N+G + + + ++ + F+ P + V+ +
Sbjct: 235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY 294
Query: 293 DHRY------FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
Y + R L W+ K +E + TL+++ +
Sbjct: 295 GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 84.1 bits (206), Expect = 2e-18
Identities = 51/318 (16%), Positives = 90/318 (28%), Gaps = 45/318 (14%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITGA G +G + +L + E++ D DIT
Sbjct: 3 KILITGANGQLGREIQKQLKGK--NVEVIPTD---------------------VQDLDIT 39
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+N + + +++ AA T VD N G
Sbjct: 40 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPK-----NLAAAAYSVG 94
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ D E+ E ++ P + Y TK E + ++ R
Sbjct: 95 AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN----FVKALNPKYYIVRTA 150
Query: 194 NVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHV 253
+YG K + +L + + V + D+A ++ G
Sbjct: 151 WLYGDGNNFVKTMINLG---KTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEKNYGTF 205
Query: 254 YNVGTKKERSVLDVAADICTL---FKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKRLGW 308
+ K+ P T + + RP L + L+
Sbjct: 206 HCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSV---LRNYMLELTTG 262
Query: 309 KEKTPWEEGLKLTLEWYK 326
W+E LK ++ +
Sbjct: 263 DITREWKESLKEYIDLLQ 280
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 81.6 bits (199), Expect = 2e-17
Identities = 49/314 (15%), Positives = 91/314 (28%), Gaps = 12/314 (3%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
I++TG AGFIGS++ L +I+ +D L + NL + +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLN-------IADYMDK 53
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
D + ++ E + + ++ ++ +N Y L L ++
Sbjct: 54 EDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLY 113
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
S G T + E + ++ +
Sbjct: 114 ASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 173
Query: 195 VYGPNQFPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHRGVIGHV 253
G + G+ + G+ + R ++Y DVA+ L GV G
Sbjct: 174 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIF 233
Query: 254 YNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRY-FLDDQKLKR-LGWKEK 311
T + S VA K + I + + D L+ K
Sbjct: 234 NLG-TGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 292
Query: 312 TPWEEGLKLTLEWY 325
EG+ + W
Sbjct: 293 KTVAEGVTEYMAWL 306
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 79.1 bits (193), Expect = 5e-17
Identities = 41/265 (15%), Positives = 72/265 (27%), Gaps = 23/265 (8%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+L+TGA+G G V +L + + L + + GDI
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-------SAQGKEKIGGEADVFIGDI 56
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
T AD +N +GID ++ + + + K
Sbjct: 57 TDADSINP--AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 114
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
I + + +G + + Y G P R
Sbjct: 115 QIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILHRGVIG 251
+ +L+ K +L + ADVAE +L
Sbjct: 174 GGLLDKEGGVRELLVG------KDDELLQTDTK-----TVPRADVAEVCIQALLFEEAKN 222
Query: 252 HVYNVGTKKERSVLDVAADICTLFK 276
+++G+K E + D LF
Sbjct: 223 KAFDLGSKPEGTSTPT-KDFKALFS 246
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 77.9 bits (190), Expect = 3e-16
Identities = 38/276 (13%), Positives = 83/276 (30%), Gaps = 35/276 (12%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH--PSRASPNFKFL 68
K ++LI G G+IG + N I + L + + S++ + K +
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 59
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
+ + + + +D ++ + +++I L+EA K G
Sbjct: 60 EASLDDH--QRLVDALKQVDVVISAL-----------AGGVLSHHILEQLKLVEAIKEAG 106
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+KRF+ + + + V + +P
Sbjct: 107 NIKRFLPSEFGMDPDIMEH--------------ALQPGSITFIDKRKVRRAIEAASIPYT 152
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH-- 246
N G F L + ++ I+G+G+ ++ DV +
Sbjct: 153 YVSSNMFAGY--FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT 282
+ + +Y S +V L + +K
Sbjct: 211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKI 246
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 68.4 bits (165), Expect = 4e-13
Identities = 53/323 (16%), Positives = 80/323 (24%), Gaps = 36/323 (11%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
IL+ G G +G + L ++ALD + K GD +
Sbjct: 2 NILLFGKTGQVGWELQRSLAPV---GNLIALDV-----------------HSKEFCGDFS 41
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + D I++ AA T VD E + +
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAANETG 96
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY-HRSYGLPTITTRG 192
V DI E P N Y TK E + + T
Sbjct: 97 AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYA 156
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN----VRSYLYCADVAEAFDVILHRG 248
+ +L + L++ Q + A + H
Sbjct: 157 GKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV 216
Query: 249 VIGHVYNVGTKKERS-VLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRYFLDDQKLKR 305
G A L +L T Y RP N L+ +K +R
Sbjct: 217 AGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGN---SRLNTEKFQR 273
Query: 306 LGWKEKTPWEEGLKLTLEWYKKN 328
WE G+K L
Sbjct: 274 NFDLILPQWELGVKRMLTEMFTT 296
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (153), Expect = 5e-12
Identities = 28/248 (11%), Positives = 57/248 (22%), Gaps = 48/248 (19%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
KKI I GA G G + ++ YE+ L ++ +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLV--------RDSSRLPSEGPRPAHVV 51
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ G D ++ N T G ++ A K G V
Sbjct: 52 VGDVLQAADVDKTVAGQDAVIVLLG-------TRNDLSPTTVMSEGARNIVAAMKAHG-V 103
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ + ++ + +P ++L + +
Sbjct: 104 DKVVACTSAFLL---------WDPTKVPPRLQAVTDDHIRMHKVLRESGLKYV------- 147
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-DVILHRGV 249
++P I + +G + D+ +
Sbjct: 148 -------------AVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
Query: 250 IGHVYNVG 257
GH
Sbjct: 195 DGHSTYPS 202
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 65.2 bits (157), Expect = 5e-12
Identities = 42/272 (15%), Positives = 81/272 (29%), Gaps = 36/272 (13%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+IL+ GA G+IG HV + + L + ++ N ++ +FK +I
Sbjct: 4 SRILLIGATGYIGRHVAKASLDL--GHPTFLLVRES--TASSNSEKAQLLESFKASGANI 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ H + V N + I +++A K G VKR
Sbjct: 60 VHGSID------------DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKR 107
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F + + + V + G+P
Sbjct: 108 FFPSEFGNDVDNVHA---------------VEPAKSVFEVKAKVRRAIEAEGIPYTYVSS 152
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL--HRGVI 250
N G + + + L A ++ I G+G+ ++ D+ + R +
Sbjct: 153 NCFAGYFL---RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN 209
Query: 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKT 282
+Y S+ ++ A EK
Sbjct: 210 KTLYLRLPANTLSLNELVALWEKKIDKTLEKA 241
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 60.4 bits (145), Expect = 2e-10
Identities = 38/264 (14%), Positives = 67/264 (25%), Gaps = 38/264 (14%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ K I + GA G G+ + + + A +L A
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQV--------HSLKGLIAEELQAIPNV 51
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ L+N + + +F N+ + I L +A K G +
Sbjct: 52 TLFQGPLLN--------NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTI 103
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ +I+ S + + P P A K E V
Sbjct: 104 QHYIY-------------SSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 150
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL---HR 247
NN L ++ + + DV A I +
Sbjct: 151 YNNNFTSLPYP---LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ 207
Query: 248 GVIGHVYNVGTKKERSVLDVAADI 271
GH + + S + V A
Sbjct: 208 KWNGHRIALTFET-LSPVQVCAAF 230
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 49.0 bits (115), Expect = 5e-07
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46
PK++L+ GA G G H+ +R++ +++A +
Sbjct: 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 36
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (113), Expect = 1e-06
Identities = 6/48 (12%), Positives = 18/48 (37%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP 58
+ K + I GA+G G + +++ ++ + + +
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN 60
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 24/199 (12%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLK 69
P +++TGA IG + +L+K+ I+A ++ + LK++ SR L
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRV----HVLP 57
Query: 70 GDITCADLMNYL-------LVSEGIDTIMHFAAQTHVDNSFGNSF-----EFTNNNIYGT 117
+TC ++ + S+G+ +++ A + E + N
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 118 HVLLEAC-------KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170
+L + + + + + S N S P Y +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 171 GAEMLVMAYHRSYGLPTIT 189
M +
Sbjct: 178 AINMFGRTLAVDLKDDNVL 196
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 46.6 bits (110), Expect = 4e-06
Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 21/184 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K ++ A G IG + L+K V LD+++ ++L L N F D+
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRNLKN-FVILDRVENPTALAELKAINPKVNITFHTYDV 64
Query: 73 T-----CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTN--NNIYGTHVLLEACK 125
T L+ + I+ A D+ + N + T +L+
Sbjct: 65 TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIA-INFTGLVNTTTAILDFWD 123
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
I + V G + YSA+KA + + +
Sbjct: 124 KRKGGPGGIIANICSVTGF------NAIHQVP------VYSASKAAVVSFTNSLAKLAPI 171
Query: 186 PTIT 189
+T
Sbjct: 172 TGVT 175
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (99), Expect = 8e-05
Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 10/198 (5%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK---LDYCSSLKNLH 57
++ EF P + KK+++TGA+ IG + L K + A K S L
Sbjct: 3 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 58 PSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGT 117
+ A ++ + G ++ T+ + +
Sbjct: 63 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 118 HVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM 177
+ L LT + S + + + + P + YSA+K +
Sbjct: 123 N-FLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVA------AYSASKFALDGFFS 175
Query: 178 AYHRSYGLPTITTRGNNV 195
+ + Y + +
Sbjct: 176 SIRKEYSVSRVNVSITLC 193
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 40.9 bits (95), Expect = 3e-04
Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 12/185 (6%)
Query: 5 FEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASP 63
P S++ K ITG +G +T L + V K+D + S+
Sbjct: 18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGN 75
Query: 64 NFKFLKGDIT----CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV 119
++ D+ + ++ L+ G I+ A + + I +
Sbjct: 76 KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVL 135
Query: 120 LLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
A ++ + + + I S P ++ KAG E + +
Sbjct: 136 NGTAFV---TLEIGKQLIKAQKGAAFLSITTIYAETGSG--FVVPSASAKAGVEAMSKSL 190
Query: 180 HRSYG 184
+G
Sbjct: 191 AAEWG 195
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 40.4 bits (94), Expect = 4e-04
Identities = 31/177 (17%), Positives = 51/177 (28%), Gaps = 20/177 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K +LITGAA IG K +VA D L + + + D+
Sbjct: 6 KAVLITGAAHGIGRATLELFAKE--GARLVACDI-----EEGPLREAAEAVGAHPVVMDV 58
Query: 73 T----CADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
L G +D ++H+A T + + E + + +
Sbjct: 59 ADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL--TGSFLVA 116
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
+ T +GN + Y+A+ AG L G
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQA------NYAASMAGVVGLTRTLALELG 167
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.6 bits (92), Expect = 7e-04
Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 21/177 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ L+TGA IG L + ++VA+ + + S L +L ++ P + + D+
Sbjct: 6 LRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTN--SDLVSL--AKECPGIEPVCVDL 59
Query: 73 TCADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFT----NNNIYGTHVLLEACKLT 127
D L G +D +++ AA + + E + N+ + +
Sbjct: 60 GDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD 119
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
+ + + M + + P YS+TK ML A G
Sbjct: 120 MINRGVPG----SIVNVSSMVAHVTFPNLI------TYSSTKGAMTMLTKAMAMELG 166
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 39.3 bits (91), Expect = 0.001
Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 19/193 (9%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
S+ K I++TG IG T + + ++ D + + K
Sbjct: 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAY 64
Query: 69 KGDIT----CADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEF----TNNNIYGTHV 119
+ D++ + + G I ++ A + V + + E + N++G
Sbjct: 65 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124
Query: 120 LLEAC---KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLV 176
A L Q K I V++ + S G+ Y+++KA LV
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV------FYNSSKAACSNLV 178
Query: 177 MAYHRSYGLPTIT 189
+ I
Sbjct: 179 KGLAAEWASAGIR 191
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 38.9 bits (90), Expect = 0.001
Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 13/186 (6%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
S K L+TG + IG + L + ++ + L+ N +
Sbjct: 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGS 60
Query: 69 KGDITCADLMNYLL-----VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEA 123
D+ + L+ V +G I+ A + + E N I GT+
Sbjct: 61 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
V + + P S YSA+K + + +
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSL------YSASKGAINQMTKSLACEW 174
Query: 184 GLPTIT 189
I
Sbjct: 175 AKDNIR 180
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (90), Expect = 0.001
Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 21/177 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+++L+TGA IG L +VA+ + + L +L R P + + D+
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQ--ADLDSL--VRECPGIEPVCVDL 61
Query: 73 TCADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFT----NNNIYGTHVLLEACKLT 127
+ L S G +D +++ AA + + E N+ + +
Sbjct: 62 GDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV-AR 120
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
G + R + + + + S + Y +TK +ML G
Sbjct: 121 GLIARGVPGA---IVNVSSQCSQRAVT------NHSVYCSTKGALDMLTKVMALELG 168
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 38.0 bits (87), Expect = 0.002
Identities = 18/185 (9%), Positives = 39/185 (21%), Gaps = 26/185 (14%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
S K KK ++ G +G L + + +
Sbjct: 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVL---CGRKLDKAQAAADSVNKRFKVNVT 76
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAA---QTHVDNSFGNSFE--FTNNNIYGTHVLLEA 123
+ + +G + A + ++ N + + +
Sbjct: 77 AAETADDASRAEAV--KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGG 134
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
T + K + G IG +A L + +
Sbjct: 135 IDATDKGKEYGGKRAFGALG-------IGGL---------KLKLHRACIAKLFESSEGVF 178
Query: 184 GLPTI 188
I
Sbjct: 179 DAEEI 183
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 38.4 bits (89), Expect = 0.002
Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 28/196 (14%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLKGD 71
K +ITG IG + + ++ +++ D +F + D
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSV--GTPDQIQFFQHD 62
Query: 72 IT----CADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEF----TNNNIYGTHVLLE 122
+ L + + G + T+++ A + + N+ G
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 123 AC--KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH 180
++ + ++ + G +G+P Y+A+K ++ +
Sbjct: 123 LGIQRMKNKGLGASIINMSSIEGF------VGDPSLG------AYNASKGAVRIMSKSAA 170
Query: 181 RSYGLPTITTRGNNVY 196
L R N V+
Sbjct: 171 LDCALKDYDVRVNTVH 186
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (89), Expect = 0.002
Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 26/199 (13%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
+ + L+TGA+G IG+ V L++ A + + +
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 68
Query: 71 DIT----CADLMNYLLVSEG-IDTIMHFAAQTH----VDNSFGNSFEFTNNNIYG----T 117
D++ + + + +D ++ A + S + N N+ T
Sbjct: 69 DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 128
Query: 118 HVLLEACKLTGQVK-RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLV 176
++ K I++++ M P + + YSATK L
Sbjct: 129 REAYQSMKERNVDDGHIININS--------MSGHRVLPLSVT----HFYSATKYAVTALT 176
Query: 177 MAYHRSYGLPTITTRGNNV 195
+ R +
Sbjct: 177 EGLRQELREAQTHIRATCI 195
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 38.1 bits (88), Expect = 0.002
Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 14/177 (7%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLKGD 71
K L+TGA IG + L K+ ++ + C S+ + S GD
Sbjct: 11 KVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGD 67
Query: 72 IT----CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
++ ++++N +L I+ A DN F ++ T++
Sbjct: 68 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
KR I+ + + + GN + YS++KAG + +
Sbjct: 128 PISKRMINNRYGRIINISSIVGLTGNVGQA------NYSSSKAGVIGFTKSLAKELA 178
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 37.2 bits (85), Expect = 0.004
Identities = 21/187 (11%), Positives = 51/187 (27%), Gaps = 21/187 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+++ G G +GS + KN Y ++ +D L + + + + G+
Sbjct: 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNID----------LSANDQADSNILVDGNK 50
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ ++ + VD F + + + + A + Q
Sbjct: 51 NWTE-----QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVW 105
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLL----PTNPYSATKAGAEMLVMAYHRSYGLPTI 188
++ + A+ + Y KA L +
Sbjct: 106 SSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD 165
Query: 189 TTRGNNV 195
+ +
Sbjct: 166 NSAVLTI 172
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 37.0 bits (85), Expect = 0.004
Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 20/177 (11%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K IL+TGAA IG + + +VA+D+ + L + + D+
Sbjct: 6 KTILVTGAASGIGRAALDLFARE--GASLVAVDREE--RLLAEAV-AALEAEAIAVVADV 60
Query: 73 T----CADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ + L G + + HFA H S+ E + LT
Sbjct: 61 SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEK--------VLRVNLT 112
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
G G+ Y+A K G L
Sbjct: 113 GSFLVARKAGEVLEE--GGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELA 167
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 684 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.98 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.97 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.97 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.97 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.94 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.94 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.92 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.92 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.9 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.89 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.86 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.86 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.85 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.81 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.81 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.8 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.78 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.74 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.72 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.67 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.67 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.65 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.65 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.64 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.64 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.63 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.62 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.62 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.61 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.61 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.61 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.61 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.6 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.6 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.6 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.59 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.59 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.58 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.58 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.58 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.57 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.57 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.57 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.57 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.57 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.56 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.56 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.55 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.55 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.55 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.54 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.54 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.53 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.53 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.53 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.52 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.51 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.51 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.49 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.49 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.47 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.47 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.47 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.46 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.45 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.44 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.42 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.41 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.41 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.41 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.39 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.39 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.39 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.38 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.38 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.36 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.36 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.35 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.33 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.33 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.32 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.32 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.32 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.31 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.31 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.31 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.3 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.29 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.29 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.29 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.29 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.29 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.28 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.28 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.28 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.28 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.28 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.27 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.27 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.26 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.26 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.25 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.24 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.24 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.22 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.21 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.21 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.21 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.2 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.19 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.19 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.18 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.18 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.16 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.16 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.16 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.15 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.15 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.13 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.12 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.11 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.11 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.11 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.11 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.1 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.1 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.09 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.09 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.09 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.09 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.07 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.05 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.05 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.04 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.98 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.97 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.91 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.91 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.89 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.84 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.77 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.76 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.74 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.7 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.67 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.64 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.6 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.6 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.45 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.4 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.4 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.25 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.24 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.21 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.93 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.8 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.71 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.7 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.67 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.65 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.56 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.5 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.49 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.46 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.36 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.36 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.29 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.28 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.23 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.23 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.18 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.17 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.16 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.12 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.1 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.07 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.04 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.01 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.99 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.95 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.94 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.92 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.9 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.89 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.88 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.87 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.86 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.83 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.82 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.79 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.72 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.72 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.72 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.68 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.68 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.62 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.61 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.59 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.59 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.55 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.54 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.53 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.49 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.44 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.4 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.39 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.22 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.22 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.22 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.12 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.07 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.04 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.99 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.91 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.9 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.84 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.72 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.63 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.61 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.6 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.59 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.52 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.41 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 95.4 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.37 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.37 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.37 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.33 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 95.25 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.19 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.19 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 95.11 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.05 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.98 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 94.96 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.9 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.9 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 94.89 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 94.85 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.84 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.71 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 94.7 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 94.68 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 94.61 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.59 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 94.55 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 94.44 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 94.43 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 94.42 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.4 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 94.39 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 94.35 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.29 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.22 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.18 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.05 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.89 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 93.88 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.88 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.67 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 93.63 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.59 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 93.55 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.31 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.31 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 92.86 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.85 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 92.85 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.77 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 92.54 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 92.53 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 92.52 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 92.31 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 92.25 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 92.2 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 92.16 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 92.11 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 92.03 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 92.03 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 91.95 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 91.82 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 91.77 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 91.74 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.73 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.68 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 91.65 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 91.63 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 91.44 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 90.74 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 90.61 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 90.43 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 90.37 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 90.27 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 90.23 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.1 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 90.03 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 89.89 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 89.77 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.74 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 89.61 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 89.56 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.47 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 89.12 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 89.09 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 88.92 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 88.84 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 88.72 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.62 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 88.58 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.57 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.5 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 88.5 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 88.43 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 88.42 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 88.37 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 88.36 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.34 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.32 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 88.22 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 88.16 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 88.13 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 87.98 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 87.97 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 87.94 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.89 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 87.83 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 87.63 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 87.59 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.27 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 87.24 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 87.23 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.2 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 87.09 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.04 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 86.97 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 86.82 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.77 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 86.72 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 86.68 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.45 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 86.33 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 86.18 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 86.12 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 86.09 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 86.08 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 85.78 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 85.73 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 85.51 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 85.41 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 85.25 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 85.19 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.88 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 84.83 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 84.77 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 84.43 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 84.41 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 84.39 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 84.39 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 84.26 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 84.03 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 84.0 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 83.96 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 83.77 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 83.67 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 83.63 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 83.62 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 83.62 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 83.59 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 83.54 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 83.49 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 83.47 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 83.37 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 83.33 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 83.14 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 83.13 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 82.98 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 82.93 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 82.87 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 82.74 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 82.72 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 82.67 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 82.56 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.27 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 82.13 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 82.03 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 81.97 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 81.95 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 81.92 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 81.83 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 81.76 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 81.75 | |
| d1sc6a2 | 132 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 81.68 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 81.51 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.48 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 81.47 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 81.29 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 80.97 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 80.95 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 80.88 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 80.78 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 80.76 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 80.69 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 80.63 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 80.59 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 80.59 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 80.55 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 80.43 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 80.42 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 80.38 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 80.32 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 80.21 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 80.2 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 80.02 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.1e-46 Score=385.20 Aligned_cols=316 Identities=39% Similarity=0.702 Sum_probs=274.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCC----cEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPD----YEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
|||||||||||||++|++.|+++++. .+|+.+++.........+.......+++++.+|+.+........ ..+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc--cccc
Confidence 68999999999999999999999432 25666665543333333444445578999999999999888776 8999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
.|+|+|+.........++...+++|+.++.+|+++|++.+ +++|||+||+++||.....+ .+|+++..|.++|+.+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~---~~E~~~~~p~~~Y~~s 154 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGS---WTESSPLEPNSPYAAS 154 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSC---BCTTSCCCCCSHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCC---CCCCCCCCCCCHHHHH
Confidence 9999999877666667788899999999999999999987 89999999999999876543 4788899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|.++|.+++.++++++++++++||++||||++.+..+++.++.++..++++.+++++++.|+|+|++|+|+++..+++++
T Consensus 155 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998778899999999999999999999999999999999999999999998
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHHh
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~~ 327 (684)
..+++||++++++.++.|+++.+.+.+|.+.+. +......+.....+.+|++|+++ |||+|+++++|+|+++++||++
T Consensus 235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~ 313 (322)
T d1r6da_ 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSS-VRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (322)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGG-EEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCeeEEeecccchhHHHHHHHHHHhCCCccc-eeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Confidence 888999999999999999999999999976543 33334455555667899999987 9999999999999999999999
Q ss_pred CCCccccc
Q 035631 328 NPHWWGDV 335 (684)
Q Consensus 328 ~~~~~~~~ 335 (684)
++.||+.+
T Consensus 314 n~~~~~~~ 321 (322)
T d1r6da_ 314 NRGWWEPL 321 (322)
T ss_dssp CHHHHGGG
T ss_pred hHHhHhhC
Confidence 99998754
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.1e-46 Score=390.47 Aligned_cols=320 Identities=42% Similarity=0.722 Sum_probs=271.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcE-EEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYE-IVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|||||||||||||++|+++|+++ |++ |+++++.........+......++++++++|++|.+.+..++...++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 68999999999999999999999 665 566666544444445555555678999999999999999998777999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEEeCcccccCCCCCCCC-------CCCCC
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG--------QVKRFIHVSTDEVYGETDMESDI-------GNPEA 156 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--------~~~~~i~~SS~~vyg~~~~~~~~-------~~~e~ 156 (684)
|||+......++.++...+++|+.++.+++++|++.+ .+++|||+||..+||........ ...|.
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 9999877766777889999999999999999998753 24699999999999976543221 12356
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
++..|.+.||.+|.++|.+++.++++++++++++||++||||+....++++.++.++..++++.+++++++.|+|+|++|
T Consensus 159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D 238 (361)
T d1kewa_ 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence 67789999999999999999999999999999999999999988777899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCC------cceeeccCCCCCCcceecCHHHHHh-cCCc
Q 035631 237 VAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE------KTIHYVQDRPFNDHRYFLDDQKLKR-LGWK 309 (684)
Q Consensus 237 ~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~------~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~ 309 (684)
+|+++..++++...+++|||+++++.++.|+++.+.+.++...+ ..+...+..+.....+.+|++|+++ |||+
T Consensus 239 ~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~ 318 (361)
T d1kewa_ 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCC
Confidence 99999999998888889999999999999999999987643221 2334444555556677899999987 9999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCcccc
Q 035631 310 EKTPWEEGLKLTLEWYKKNPHWWGD 334 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~~~~~~ 334 (684)
|+++++++|+++++||+++++|+..
T Consensus 319 P~~~l~e~i~~ti~w~~~n~~~~~~ 343 (361)
T d1kewa_ 319 PLETFESGIRKTVEWYLANTQWVNN 343 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999876543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-44 Score=361.85 Aligned_cols=304 Identities=28% Similarity=0.479 Sum_probs=251.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+|||||||||||||++|+++|+++ |++|++++|..+ .....+........+++...|+. ..++ .++|+||
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~-~~~~~~~~~~~~~~~d~~~~~~~-----~~~~--~~~d~Vi 70 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFT-GRKRNVEHWIGHENFELINHDVV-----EPLY--IEVDQIY 70 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSS-CCGGGTGGGTTCTTEEEEECCTT-----SCCC--CCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCc-CCHHHHHHhcCCCceEEEehHHH-----HHHH--cCCCEEE
Confidence 589999999999999999999999 899999987532 22222222223344556555553 3344 5899999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCC--CCCCCCCCCCCChhHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDI--GNPEASQLLPTNPYSATK 169 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~--~~~e~~~~~p~~~Y~~sK 169 (684)
|||+......+..++...+++|+.++.+|+++|++.+ .|+||+||++|||.....+.. ...+.++..|.++|+.+|
T Consensus 71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK 148 (312)
T d2b69a1 71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK 148 (312)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHH
T ss_pred ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHH
Confidence 9999877666678899999999999999999999987 489999999999975543321 123456778999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.++|.+++.++++++++++++||++||||+... ..+++.++.++..++++.+++++.+.++|+|++|+++++..+++.
T Consensus 149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~ 228 (312)
T d2b69a1 149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 228 (312)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence 999999999999999999999999999997643 358899999999999999999999999999999999999999876
Q ss_pred CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHH
Q 035631 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 248 ~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~ 326 (684)
.. +++||+++++.+++.++++.+.+.+|.+.+ +.+.+..+.......+|++|+++ |||+|+++++++|+++++||+
T Consensus 229 ~~-~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~ 305 (312)
T d2b69a1 229 NV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305 (312)
T ss_dssp SC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred cc-CCceEecCCcccchhhHHHHHHHHhCCCCc--eEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 54 568999999999999999999999998765 44445555555567789999987 999999999999999999998
Q ss_pred hCCC
Q 035631 327 KNPH 330 (684)
Q Consensus 327 ~~~~ 330 (684)
++.+
T Consensus 306 ~~~~ 309 (312)
T d2b69a1 306 KELE 309 (312)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.6e-43 Score=365.46 Aligned_cols=318 Identities=36% Similarity=0.602 Sum_probs=269.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+||||||||||||||++|+++|+++++.++|+++++.........+. .....+++++.+|+.|.+.+..++ .+++.|
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~Di~d~~~~~~~~--~~~~~v 77 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVDKLA--AKADAI 77 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH-HhhcCCeEEEEccCCCHHHHHHHH--hhhhhh
Confidence 46899999999999999999999996667788877643322222221 123468999999999999999998 789999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCC---------CCCCCCCCCCCCCCC
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETD---------MESDIGNPEASQLLP 161 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~---------~~~~~~~~e~~~~~p 161 (684)
+|+|+......+..++...+++|+.++.+++++|+..+ .++|++||..+||... ........|.++..|
T Consensus 78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p 155 (346)
T d1oc2a_ 78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP 155 (346)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCC
Confidence 99999877666667888999999999999999999987 6899999999998531 111223456678889
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
.+.|+.+|.++|.+++.+++.++++++++||+.||||.......+..++.....+.++.+++++.+.++|+|++|+|+++
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 99999999999999999999899999999999999998777788888888888899899999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccC-CHHHHHH
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKT-PWEEGLK 319 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~-~~~e~i~ 319 (684)
+.++.++..++.||+++++..++.++++.+.+.++.... .+...+.++.....+.+|++|+++ |||+|++ +++++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~ 314 (346)
T d1oc2a_ 236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLE 314 (346)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHH
T ss_pred HHHHhhcccCccccccccccccchHHHHHHHHHhCCCCc-ceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHH
Confidence 999999888999999999999999999999999987543 244444555555567789999987 9999986 6999999
Q ss_pred HHHHHHHhCCCcccc
Q 035631 320 LTLEWYKKNPHWWGD 334 (684)
Q Consensus 320 ~~i~~~~~~~~~~~~ 334 (684)
++++||+++++||+.
T Consensus 315 ~ti~w~~~n~~~~~~ 329 (346)
T d1oc2a_ 315 ETIQWYTDNQDWWKA 329 (346)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988854
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-43 Score=367.78 Aligned_cols=307 Identities=22% Similarity=0.282 Sum_probs=243.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-----CCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-----PSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
|+|||||||||||++|+++|+++ |++|++++|..+......+. .....++++++++|+.|.+.+.+++...++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 68999999999999999999999 89999999964322211111 122346799999999999999999987789
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
|+|||+|+..+...++.++...+++|+.++.+|+++|++.+ +++||||+||++|||..... +.+|+++..|.++|
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~---~~~E~~~~~P~~~Y 156 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI---PQKETTPFYPRSPY 156 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS---SBCTTSCCCCCSHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCC---CcCCCCCCCCCChH
Confidence 99999999988888889999999999999999999999875 34589999999999875543 34788899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCC-ceEEecCCCceEecccHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEK---LIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
+.+|.++|.+++.++++++++++++||+++|||...+.. .+...+..+..++ ....++++.+.++|+|++|+|+++
T Consensus 157 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~ 236 (357)
T d1db3a_ 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence 999999999999999999999999999999999754332 3334444444444 355568899999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcce----------eec-c------------------CCCCC
Q 035631 242 DVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTI----------HYV-Q------------------DRPFN 292 (684)
Q Consensus 242 ~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~----------~~~-~------------------~~~~~ 292 (684)
..+++.. .++.||+++++.+|+.|+++.+.+.+|....... ... . .++..
T Consensus 237 ~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 315 (357)
T d1db3a_ 237 WMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAE 315 (357)
T ss_dssp HHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC
T ss_pred HHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcc
Confidence 9998865 4679999999999999999999999885322100 000 0 01122
Q ss_pred CcceecCHHHHHh-cCCcccCCHHHHHHHHHHHH
Q 035631 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325 (684)
Q Consensus 293 ~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~ 325 (684)
.....+|++|+++ |||+|+++++|+|+++++++
T Consensus 316 ~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~ 349 (357)
T d1db3a_ 316 VETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349 (357)
T ss_dssp -CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 2345679999988 99999999999999998653
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-42 Score=357.54 Aligned_cols=314 Identities=28% Similarity=0.437 Sum_probs=255.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccC-CCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-HPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|||||||||||||++|++.|+++ |++|++++|..+....... .......+++++++|+.|.+.+.+++...++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 68999999999999999999999 8999999875432111000 00112357999999999999999999877999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|+|+....+.+..++...+++|+.++++++++|++.+ +++||++||.++|+....... .++.....|.++|+.+|..
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~--~e~~~~~~p~~~Y~~sK~~ 155 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPY--VESFPTGTPQSPYGKSKLM 155 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSB--CTTSCCCCCSSHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEcccccccc--ccccccCCCcchHHHHHhh
Confidence 9999877666667889999999999999999999987 999999999999987665432 2344566789999999999
Q ss_pred HHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHc-CCceEEecC------CCceEeccc
Q 035631 172 AEMLVMAYHRS-YGLPTITTRGNNVYGPNQF----------PEKLIPKFILLAMK-GQQLPIHGN------GSNVRSYLY 233 (684)
Q Consensus 172 ~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~i~ 233 (684)
+|.++.++... .+++++++|++++||+... ...+++.++..+.. ++++.++++ +++.|+|+|
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~ 235 (338)
T d1udca_ 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence 99999877665 4889999999999998532 13467777766654 456766654 778899999
Q ss_pred HHHHHHHHHHHHhc---CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCc
Q 035631 234 CADVAEAFDVILHR---GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWK 309 (684)
Q Consensus 234 ~~D~a~~i~~~~~~---~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~ 309 (684)
+.|++.++..+... ...+++||+++++++|+.|+++.+.+.+|.+.+ +.+.+.++.......+|++|+++ |||+
T Consensus 236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgwk 313 (338)
T d1udca_ 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELNWR 313 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCc--eEECCCCCCCCCEeeECHHHHHHHHCCC
Confidence 99999988877753 234578999999999999999999999997665 44445555555667899999998 9999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccc
Q 035631 310 EKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 310 p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
|+++++++|+++++|++++++|+.
T Consensus 314 p~~~l~egi~~ti~w~~~~~~~~~ 337 (338)
T d1udca_ 314 VTRTLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred cCCCHHHHHHHHHHHHHhchhhCC
Confidence 999999999999999999998764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.7e-42 Score=355.66 Aligned_cols=309 Identities=28% Similarity=0.422 Sum_probs=259.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-----cccCCCCCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-----LKNLHPSRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
++|+|||||||||||++|+++|+++ |++|++++|...... ...+........++++.+|+.|...+.... .
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--~ 90 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--A 90 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--T
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc--c
Confidence 4579999999999999999999999 899999997532111 111112222357899999999999888877 8
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChh
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPY 165 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 165 (684)
.++.|+|+++......+..++...+++|+.++.+|+++|++.+ +++|||+||.++||.....+ .+|+++..|.+.|
T Consensus 91 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y 166 (341)
T d1sb8a_ 91 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLP---KVEDTIGKPLSPY 166 (341)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSS---BCTTCCCCCCSHH
T ss_pred cccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCC---ccCCCCCCCCCcc
Confidence 9999999999877666778889999999999999999999987 89999999999999765543 4788899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF 241 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 241 (684)
+.+|.++|.+++.++++++++++++||++|||++..+. .+++.++..+..++++.+++++.+.++|+|++|++.++
T Consensus 167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~ 246 (341)
T d1sb8a_ 167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 246 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence 99999999999999999999999999999999975433 57888889999999999999999999999999999999
Q ss_pred HHHHhcC--CCCcEEEecCCCccCHHHHHHHHHHHhCCCCC---cceeeccCCCCCCcceecCHHHHHh-cCCcccCCHH
Q 035631 242 DVILHRG--VIGHVYNVGTKKERSVLDVAADICTLFKLEPE---KTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWE 315 (684)
Q Consensus 242 ~~~~~~~--~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~ 315 (684)
..++... ..+++||+++++..|+.|+++.+.+.++.+.. ........++........|++|+++ |||+|+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~ 326 (341)
T d1sb8a_ 247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVS 326 (341)
T ss_dssp HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHH
T ss_pred hhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHH
Confidence 9998754 35679999999999999999999998875421 1122222333344456789999998 9999999999
Q ss_pred HHHHHHHHHHHh
Q 035631 316 EGLKLTLEWYKK 327 (684)
Q Consensus 316 e~i~~~i~~~~~ 327 (684)
++|+++++||++
T Consensus 327 ~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 327 AGVALAMPWYIM 338 (341)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.7e-41 Score=345.43 Aligned_cols=310 Identities=22% Similarity=0.270 Sum_probs=258.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|||||||||||++|+++|+++ ||+|++++|..+......+......++++++++|+.|.+.+...+....+++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 68999999999999999999999 8999999997543333333333344678999999999999999988789999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+.........++...++.|+.++.+++++|++.+..++|++.||..+||...... .+|+++..|.+.|+.+|.++
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~---~~E~~~~~p~~~Y~~sK~~~ 155 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER---QDENTPFYPRSPYGVAKLYG 155 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC---CCCCCCccccChhHHHHHHH
Confidence 999888777778899999999999999999999988777999999999998766543 36888999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHc-CCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL---IPKFILLAMK-GQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|.++..++++++++++++||+++|||....... +..++.++.. +.+...++++++.|+|+|++|+|+++..+++++
T Consensus 156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence 999999999999999999999999997544432 3333444444 445556799999999999999999999999876
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeecc--CCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHHHHHH
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~ 325 (684)
. ++.||+++++..++.++++.+.+.+|...+......+ .++.....+..|++|+++ |||+|+++++|+|+++++|+
T Consensus 236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~ 314 (321)
T d1rpna_ 236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEAD 314 (321)
T ss_dssp S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 5 4689999999999999999999999876543333322 233444567789999998 89999999999999999998
Q ss_pred HhC
Q 035631 326 KKN 328 (684)
Q Consensus 326 ~~~ 328 (684)
.++
T Consensus 315 l~~ 317 (321)
T d1rpna_ 315 LRR 317 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3e-40 Score=343.39 Aligned_cols=305 Identities=23% Similarity=0.302 Sum_probs=249.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
++|||||||||||||++|+++|+++ |++|+++++....... ......++..+|+.+.+.+..++ .++|+|
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~--~~~d~V 83 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMT------EDMFCDEFHLVDLRVMENCLKVT--EGVDHV 83 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSC------GGGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchh------hhcccCcEEEeechhHHHHHHHh--hcCCeE
Confidence 5689999999999999999999999 8999999886432111 11235678889999999998888 789999
Q ss_pred EEcCccCCcCC-CCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCC----CCCCCCCCCCCChh
Q 035631 91 MHFAAQTHVDN-SFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDI----GNPEASQLLPTNPY 165 (684)
Q Consensus 91 ih~a~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~----~~~e~~~~~p~~~Y 165 (684)
||+|+...... ...++......|+.++.+++++|++.+ +++||++||..+|+.....+.. ...+..+..|.++|
T Consensus 84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 162 (363)
T d2c5aa1 84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 162 (363)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHH
Confidence 99998765422 246777889999999999999999988 9999999999999976544322 12355677899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----C-hHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----K-LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
+.+|.++|.+++.+.++++++++++||+++||+..... . ....+........+...++++.+.|+|+|++|++++
T Consensus 163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~ 242 (363)
T d2c5aa1 163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence 99999999999999999999999999999999975322 2 233444555667778888999999999999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHH
Q 035631 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLK 319 (684)
Q Consensus 241 i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~ 319 (684)
+..+++.+ .+++||+++++.+|+.|+++.+.+..|.+.+ +...+.. .......+|++|+++ |||+|+++++++|+
T Consensus 243 ~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~--i~~~~~~-~~~~~~~~d~ska~~~LGw~p~~sleegi~ 318 (363)
T d2c5aa1 243 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPGP-EGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 318 (363)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC--EEEECCC-CCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCc--eEeCCCC-CCccccccCHHHHHHHhCCCCCCCHHHHHH
Confidence 99998765 4679999999999999999999999998655 3333332 233456689999988 99999999999999
Q ss_pred HHHHHHHhCCC
Q 035631 320 LTLEWYKKNPH 330 (684)
Q Consensus 320 ~~i~~~~~~~~ 330 (684)
++++||+++.+
T Consensus 319 ~ti~w~~~~~~ 329 (363)
T d2c5aa1 319 ITYFWIKEQIE 329 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987754
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-40 Score=340.26 Aligned_cols=316 Identities=24% Similarity=0.350 Sum_probs=256.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc-CC------CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN-LH------PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-l~------~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
|.+||||||||||||++|+++|+++ |++|+++++......... +. ......+++++++|+.|.+.+.+++.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 78 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccc
Confidence 4579999999999999999999999 899999986432111100 00 01124678999999999999999998
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
..++++|+|+|+......+..++...++.|+.++.+++++|++.+ +++|||+||..+||....... ..+.....+.+
T Consensus 79 ~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~--~~~~~~~~~~~ 155 (346)
T d1ek6a_ 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPL--DEAHPTGGCTN 155 (346)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSB--CTTSCCCCCSS
T ss_pred ccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccc--cccccccccCC
Confidence 889999999999887776777888999999999999999999988 999999999999998765432 23344566788
Q ss_pred hhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHH-cCCceEEec------CC
Q 035631 164 PYSATKAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQF----------PEKLIPKFILLAM-KGQQLPIHG------NG 225 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~-~~~~~~~~~------~~ 225 (684)
+|+.+|..+|..+..+++. .+++++++|++.+||+... ...+++.+...+. ++.++.+++ ++
T Consensus 156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g 235 (346)
T d1ek6a_ 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence 9999999999999988775 4899999999999998531 2345666665554 455555544 46
Q ss_pred CceEecccHHHHHHHHHHHHhc---CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHH
Q 035631 226 SNVRSYLYCADVAEAFDVILHR---GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQK 302 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~---~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k 302 (684)
.+.|+|+|++|+|.++..++.. ...+++||+++++.+++.|+++.+.+.+|.+.+ +.+.+.++.......+|++|
T Consensus 236 ~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~--~~~~~~~~~e~~~~~~d~~k 313 (346)
T d1ek6a_ 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANPSL 313 (346)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHH
T ss_pred CeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC--eEECCCCCCCCCEeeECHHH
Confidence 7789999999999999887654 334579999999999999999999999998665 45555566666677889999
Q ss_pred HHh-cCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 303 LKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 303 ~~~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+++ |||+|+++++|+|+++++||++++.|+.
T Consensus 314 ~~~~lgw~p~~slee~I~~~i~w~~~n~~~~~ 345 (346)
T d1ek6a_ 314 AQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345 (346)
T ss_dssp HHHTTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHCCCcCCCHHHHHHHHHHHHHhCHhhcC
Confidence 988 9999999999999999999999998865
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.1e-40 Score=338.27 Aligned_cols=310 Identities=23% Similarity=0.316 Sum_probs=245.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||++|+++|++++ .++|+++++... ....+ ...++++++++|+++.+.+.+.+. .++|+|||
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~--~~~~~---~~~~~~~~i~~Di~~~~~~~~~~~-~~~d~Vih 73 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSD--AISRF---LNHPHFHFVEGDISIHSEWIEYHV-KKCDVVLP 73 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCG--GGGGG---TTCTTEEEEECCTTTCSHHHHHHH-HHCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCc--chhhh---ccCCCeEEEECccCChHHHHHHHH-hCCCcccc
Confidence 689999999999999999999993 269999988542 11111 224689999999988766655432 58999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCC----CCCCCCCCCChhHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN----PEASQLLPTNPYSAT 168 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~----~e~~~~~p~~~Y~~s 168 (684)
+|+.........++...+..|+.++.+++++|.+.+ .+++++||..+|+.......... .+.....|.+.|+.+
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~s 151 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred ccccccccccccCCcccccccccccccccccccccc--ccccccccccccccccccccccccccccccccCCCcchhhhc
Confidence 999887766667888899999999999999999977 67789999999987655433211 223344577889999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHH
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP--------EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 240 (684)
|.++|.+++.++++++++++++|++.+||+.... ...+..++..+..++++.+++++++.++|+|++|+|++
T Consensus 152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a 231 (342)
T d2blla1 152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 231 (342)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence 9999999999999999999999999999985422 23678888999999999999999999999999999999
Q ss_pred HHHHHhcC---CCCcEEEecCCC-ccCHHHHHHHHHHHhCCCCCcceee-------c------cCCCCCCcceecCHHHH
Q 035631 241 FDVILHRG---VIGHVYNVGTKK-ERSVLDVAADICTLFKLEPEKTIHY-------V------QDRPFNDHRYFLDDQKL 303 (684)
Q Consensus 241 i~~~~~~~---~~~~~~ni~~~~-~~t~~e~~~~i~~~~g~~~~~~~~~-------~------~~~~~~~~~~~~d~~k~ 303 (684)
+..+++++ ..+++||+++++ .+|+.|+++.+.+.+|......... . ...........+|++|+
T Consensus 232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 311 (342)
T d2blla1 232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 311 (342)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHH
T ss_pred eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHH
Confidence 99999863 356899998775 5899999999999988654321110 0 00011122345799999
Q ss_pred Hh-cCCcccCCHHHHHHHHHHHHHhCCCc
Q 035631 304 KR-LGWKEKTPWEEGLKLTLEWYKKNPHW 331 (684)
Q Consensus 304 ~~-lg~~p~~~~~e~i~~~i~~~~~~~~~ 331 (684)
++ |||+|+++++|+|+++++||+++.+.
T Consensus 312 ~~~lgw~P~~sleegl~~ti~~y~~~~~~ 340 (342)
T d2blla1 312 HRCLDWEPKIDMQETIDETLDFFLRTVDL 340 (342)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred HHHHCCCcCCCHHHHHHHHHHHHHhCcCC
Confidence 88 99999999999999999999987653
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.3e-40 Score=339.07 Aligned_cols=316 Identities=27% Similarity=0.401 Sum_probs=247.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccC-CCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-HPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|.|||||||||||++|+++|+++ |++|+++++..+....... .......+++++++|+.|.+.+..++...++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 46999999999999999999999 8999999875321110000 01112357899999999999999998778999999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC-CCCCCCCCCCCCCChhHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES-DIGNPEASQLLPTNPYSATKA 170 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~-~~~~~e~~~~~p~~~Y~~sK~ 170 (684)
|+|+.........++.....+|+.++.+|+++|++.+ +++||++||.++||.....+ ..+.+|+.+..|.++|+.+|.
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 158 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHH
Confidence 9999887666667888999999999999999999987 89999999999999765432 334567788889999999999
Q ss_pred HHHHHHHHHHHh--cCCCEEEEeeCceeCCCC----------CCCChHHHHHHHHH-cCCceEEecC------CCceEec
Q 035631 171 GAEMLVMAYHRS--YGLPTITTRGNNVYGPNQ----------FPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSY 231 (684)
Q Consensus 171 ~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~ 231 (684)
++|++++.+.+. .+++++++|++++||+.. .+..+++.+...+. .++++.++++ +...+|+
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 999999998764 478899999999999743 12246666665554 3455665554 4567889
Q ss_pred ccHHHHHHHHHHHHhc-------CCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHH
Q 035631 232 LYCADVAEAFDVILHR-------GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK 304 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~-------~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 304 (684)
+++.|.+.++..+++. ...+++||+++++++|+.|+++.+.+.+|.+.+. ...+.++.......+|++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~d~sk~~ 316 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY--KVTGRRAGDVLNLTAKPDRAK 316 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------CCCCCBCCHHHH
T ss_pred eeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCce--EeCCCCCCCCCEeeECHHHHH
Confidence 9999999998888753 1235789999999999999999999999987653 333333444455678999998
Q ss_pred h-cCCcccCCHHHHHHHHHHHHHhCCCccc
Q 035631 305 R-LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333 (684)
Q Consensus 305 ~-lg~~p~~~~~e~i~~~i~~~~~~~~~~~ 333 (684)
+ |||+|+++++|+|+++++|+++++.+++
T Consensus 317 ~~lGw~p~~~lee~i~~ti~w~~~np~~~~ 346 (347)
T d1z45a2 317 RELKWQTELQVEDSCKDLWKWTTENPFGYQ 346 (347)
T ss_dssp HHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhChhcCc
Confidence 8 9999999999999999999999987754
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.5e-39 Score=341.86 Aligned_cols=317 Identities=20% Similarity=0.272 Sum_probs=247.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-----ccccCCCC------------CCCCCceEEEecCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-----SLKNLHPS------------RASPNFKFLKGDITC 74 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~l~~~------------~~~~~~~~~~~Dl~d 74 (684)
+|||||||||||||++|+++|+++ ||+|+++|...... ....+.+. ...++++++++|+.|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence 489999999999999999999999 89999997311000 00111111 113578999999999
Q ss_pred HHHHHHhhccCCCCEEEEcCccCCcCCCCCC---hHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGN---SFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 75 ~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.+.+..++...++|+|||+|+......+..+ +...++.|+.++.+++++|++.+..++++++||..+|+........
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~ 158 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 158 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence 9999999987899999999998765544444 4467899999999999999998867789999999999865543221
Q ss_pred C----------CCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-----------------CC
Q 035631 152 G----------NPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP-----------------EK 204 (684)
Q Consensus 152 ~----------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~-----------------~~ 204 (684)
. .++..+..|.++|+.+|.++|.+++.++++++++++++||++|||++... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 238 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence 1 11234677889999999999999999999999999999999999987532 23
Q ss_pred hHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCcEEEe--cCCCccCHHHHHHHHHHHhC---CCC
Q 035631 205 LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNV--GTKKERSVLDVAADICTLFK---LEP 279 (684)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni--~~~~~~t~~e~~~~i~~~~g---~~~ 279 (684)
++..++.....++++.+++++.+.|+|+|++|+++++..++++....+.|++ ++++.+|+.|+++.+.+..+ .+.
T Consensus 239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~ 318 (393)
T d1i24a_ 239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV 318 (393)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence 5788888899999999999999999999999999999999998765555444 44678999999999988754 332
Q ss_pred CcceeeccCCCCCCcceecCHHHHHhcCCcccCCHHHHHHHHHHHHHhCCC
Q 035631 280 EKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPH 330 (684)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~e~i~~~i~~~~~~~~ 330 (684)
.......+..+.....+..|++|+++|||+|+++++++++++++|++++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~ 369 (393)
T d1i24a_ 319 KKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKD 369 (393)
T ss_dssp CEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred ceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHHH
Confidence 221111222333445567889999999999999999999999999988764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-39 Score=333.57 Aligned_cols=307 Identities=21% Similarity=0.230 Sum_probs=246.8
Q ss_pred CEE-EEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC------CCCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 13 KKI-LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH------PSRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 13 ~~V-lItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
||| ||||||||||++|+++|+++ |++|++++|..+......+. ......+++++.+|+.|.+.+..++...
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99999999999999999999 89999999965322211111 1122357899999999999999999888
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG--QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTN 163 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 163 (684)
++++|+|+++......++.++...+++|+.++.+|+++|++.+ +.++|||+||++|||..... +.+|+++..|.+
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~---~~~E~~~~~P~~ 155 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEI---PQKETTPFYPRS 155 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSS---SBCTTSCCCCCS
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCC---CCCCCCCCCCCC
Confidence 9999999999877666677888889999999999999999876 24589999999999975543 347888999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL----IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 164 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
+|+.+|.++|++++.+++.++++++++||+++|||....... ...+........+...++++.+.++|+|++|+++
T Consensus 156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~ 235 (347)
T d1t2aa_ 156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence 999999999999999999999999999999999997544433 3334445556777888899999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcce------ee-------------ccCCCCCCcceecCH
Q 035631 240 AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTI------HY-------------VQDRPFNDHRYFLDD 300 (684)
Q Consensus 240 ~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~------~~-------------~~~~~~~~~~~~~d~ 300 (684)
++..++++... +.|+++.+...++.+....+....+....... .. ...++.....+.+|+
T Consensus 236 a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~ 314 (347)
T d1t2aa_ 236 AMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 314 (347)
T ss_dssp HHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred HHHHHhhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECH
Confidence 99999987653 57999999999999999999998886532100 00 011223334567899
Q ss_pred HHHHh-cCCcccCCHHHHHHHHHHHH
Q 035631 301 QKLKR-LGWKEKTPWEEGLKLTLEWY 325 (684)
Q Consensus 301 ~k~~~-lg~~p~~~~~e~i~~~i~~~ 325 (684)
+|+++ |||+|+++++|+|++++++.
T Consensus 315 skak~~Lgw~P~~sl~e~i~~~I~~~ 340 (347)
T d1t2aa_ 315 TKAKQKLNWKPRVAFDELVREMVHAD 340 (347)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 99988 99999999999999998654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1.8e-38 Score=332.21 Aligned_cols=317 Identities=25% Similarity=0.368 Sum_probs=249.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc-----------------cCCCCCCCCCceEEEecCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK-----------------NLHPSRASPNFKFLKGDITC 74 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-----------------~l~~~~~~~~~~~~~~Dl~d 74 (684)
.|||||||||||||++|+++|+++. +++|+++|+..+..... ..........+.++.+|+.|
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~-~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhC-CCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence 3699999999999999999999743 89999997532111100 01111233568899999999
Q ss_pred HHHHHHhhccC-CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCC----
Q 035631 75 ADLMNYLLVSE-GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMES---- 149 (684)
Q Consensus 75 ~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~---- 149 (684)
.+.+.+++... ++|+|||+|+.........++...++.|+.++.++++++++.+ +++++++||..+|+......
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~ 159 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccc
Confidence 99999988554 5799999999877665666778889999999999999999987 89999999999998654432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---------CChHHHHHHHH-------
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP---------EKLIPKFILLA------- 213 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~------- 213 (684)
..+..|+++..|.++|+.+|..+|.+++.+.+.++++++++||+++|||+... ..+++.++..+
T Consensus 160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 12345677888999999999999999999999999999999999999997642 23455544333
Q ss_pred ---------HcCCceEEec------CCCceEecccHHHHHHHHHHHHhc---------CCCCcEEEecCCCccCHHHHHH
Q 035631 214 ---------MKGQQLPIHG------NGSNVRSYLYCADVAEAFDVILHR---------GVIGHVYNVGTKKERSVLDVAA 269 (684)
Q Consensus 214 ---------~~~~~~~~~~------~~~~~~~~i~~~D~a~~i~~~~~~---------~~~~~~~ni~~~~~~t~~e~~~ 269 (684)
..++++.+++ +|.+.|+|+|++|+|+++..+++. ...+++||+++++++++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 2344555554 477889999999999999999863 1234799999999999999999
Q ss_pred HHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCcccCCHHHHHHHH-HHHHHhCCCcc
Q 035631 270 DICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLT-LEWYKKNPHWW 332 (684)
Q Consensus 270 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~-i~~~~~~~~~~ 332 (684)
.+.+.+|.+.+ +.....++........|++|+++ |||+|+++++|+|+++ +.|+++++..+
T Consensus 320 ~i~~~~~~~~~--~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~ 382 (383)
T d1gy8a_ 320 VARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGY 382 (383)
T ss_dssp HHHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTT
T ss_pred HHHHHhCCCCc--eEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCcccC
Confidence 99999998765 34444444445567789999998 9999999999999887 59999998765
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.4e-39 Score=326.19 Aligned_cols=290 Identities=22% Similarity=0.357 Sum_probs=237.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+|||||||||||||++|+++|+++ |+.|+++++.. ++|+.+.+.+.+++...++|.|+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~d~v~ 59 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVY 59 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCch--------------------hccccCHHHHHHHHhhcCCCEEE
Confidence 579999999999999999999999 88988876532 25889999999998878999999
Q ss_pred EcCccCCc-CCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCC-----CCCCCCChh
Q 035631 92 HFAAQTHV-DNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-----SQLLPTNPY 165 (684)
Q Consensus 92 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~Y 165 (684)
|+|+.... .....++.+.++.|+.++.+|+++|++.+ ++||||+||+++||.....+. +|+ .+..|.++|
T Consensus 60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~---~E~~~~~~~~~~~~~~Y 135 (315)
T d1e6ua_ 60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPM---AESELLQGTLEPTNEPY 135 (315)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSB---CGGGTTSSCCCGGGHHH
T ss_pred EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCc---cCCccccCCCCCCCCHH
Confidence 99986542 12234566788999999999999999987 999999999999997654332 332 233345679
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHH-----HHHHHHHcCCceEEecCCCceEecccHHH
Q 035631 166 SATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE----KLIP-----KFILLAMKGQQLPIHGNGSNVRSYLYCAD 236 (684)
Q Consensus 166 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 236 (684)
+.+|.++|++++.++++++++++++||++||||++... .+.. ........+..+.+.+++...++|+|++|
T Consensus 136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d 215 (315)
T d1e6ua_ 136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD 215 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeeh
Confidence 99999999999999999999999999999999965322 2222 23455567888888999999999999999
Q ss_pred HHHHHHHHHhcC---------CCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHhcC
Q 035631 237 VAEAFDVILHRG---------VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307 (684)
Q Consensus 237 ~a~~i~~~~~~~---------~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg 307 (684)
+++++..++... .....++++.+...++.++++.+.+.+|.+.. +.+.+.++.......+|++|+++||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~--i~~~~~~~~~~~~~~~d~sk~k~Lg 293 (315)
T d1e6ua_ 216 MAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPDGTPRKLLDVTRLHQLG 293 (315)
T ss_dssp HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEETTSCCCCSBCCBCCHHHHHTT
T ss_pred hHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc--eEECCCCCCCCceeccCHHHHHHcC
Confidence 999999988643 23468999999999999999999999998754 4555555555556678999999999
Q ss_pred CcccCCHHHHHHHHHHHHHhCC
Q 035631 308 WKEKTPWEEGLKLTLEWYKKNP 329 (684)
Q Consensus 308 ~~p~~~~~e~i~~~i~~~~~~~ 329 (684)
|+|+++++|+|+++++||++++
T Consensus 294 ~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 294 WYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999764
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.4e-38 Score=324.96 Aligned_cols=310 Identities=23% Similarity=0.245 Sum_probs=248.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc---CCC---CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN---LHP---SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
+|++||||||||||++|++.|+++ ||+|++++|..+...... +.. ......++++.+|+.+.+.+...+...
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 478999999999999999999999 899999999643211111 111 112356789999999999999998778
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcC----CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG----QVKRFIHVSTDEVYGETDMESDIGNPEASQLLP 161 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p 161 (684)
++|+|||+|+.........++...+..|+.++.++++++++.. ...++++.||..+|+..... .+|+++..|
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~----~~E~~~~~p 154 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHP 154 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS----BCTTSCCCC
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCC----CCCCCCCCC
Confidence 9999999999877666667888999999999999999997542 24578899998888766533 378889999
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHH----HHHHHcCCceEEecCCCceEecccHHHH
Q 035631 162 TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKF----ILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
.+.|+.+|..+|.++..+++.++++++++||++||||..........+ ........+..+.+++.+.|+|+|++|+
T Consensus 155 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~ 234 (339)
T d1n7ha_ 155 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234 (339)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence 999999999999999999999999999999999999976544332222 2333445556667889999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeec--cCCCCCCcceecCHHHHHh-cCCcccCCH
Q 035631 238 AEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV--QDRPFNDHRYFLDDQKLKR-LGWKEKTPW 314 (684)
Q Consensus 238 a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~-lg~~p~~~~ 314 (684)
++++..+++++..+ .++++.+...++.++++.+.+.++......+... ..++.....+..|++|+++ |||+|++++
T Consensus 235 a~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~l 313 (339)
T d1n7ha_ 235 VEAMWLMLQQEKPD-DYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF 313 (339)
T ss_dssp HHHHHHHHTSSSCC-EEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred HHHHHHHHhcCCCC-ccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCH
Confidence 99999999987654 6777778899999999999999997654333322 2344445566789999988 999999999
Q ss_pred HHHHHHHHHHHHhC
Q 035631 315 EEGLKLTLEWYKKN 328 (684)
Q Consensus 315 ~e~i~~~i~~~~~~ 328 (684)
+++|+++++|+.+.
T Consensus 314 e~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 314 EKLVKMMVDEDLEL 327 (339)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999754
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=5.8e-38 Score=323.09 Aligned_cols=309 Identities=26% Similarity=0.418 Sum_probs=245.1
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
||||||||||||++|+++|+++ |++|+++++.........+.......+++++.+|+.|.+.+.+++...++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999999999999999999999 89999998643222222222222346899999999999999999987789999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC-cccccCCCCCCC-------------CCCCCCCCC
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST-DEVYGETDMESD-------------IGNPEASQL 159 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS-~~vyg~~~~~~~-------------~~~~e~~~~ 159 (684)
|+.........++...+++|+.|+.+|+++|.+.+ ++++|+.|| ..+|+.....+. ....+..+.
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 99887666667888999999999999999999988 555555555 444443322110 112344566
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC---CCChHHHHHHHHH-----cCCceEEecCCCceEec
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQF---PEKLIPKFILLAM-----KGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 231 (684)
.|.+.|+.+|...|.++..+.+.+++..+++|++.+||+... ....++.++..+. .++++.+++++.+.++|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 788999999999999999999999999999999999987542 2345666655543 36789999999999999
Q ss_pred ccHHHHHHHHHHHHhcC--CCCcEEEecC--CCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-c
Q 035631 232 LYCADVAEAFDVILHRG--VIGHVYNVGT--KKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~--~~~~~~ni~~--~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l 306 (684)
+|++|+++++..++++. ..+++|++.. +..+++.|+++.+.+..+.+.+ +...+.++.....+..|++|+++ |
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~L 316 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKKITNAI 316 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHHHHHHH
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce--eEeCCCCCCCcCeeeECHHHHHHHH
Confidence 99999999999999753 3578999944 5678999999999999998765 44444445555567789999998 9
Q ss_pred CCcccCCHHHHHHHHHHHHHh
Q 035631 307 GWKEKTPWEEGLKLTLEWYKK 327 (684)
Q Consensus 307 g~~p~~~~~e~i~~~i~~~~~ 327 (684)
||+|+++++++|+++++|+++
T Consensus 317 g~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 317 DWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp CCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHc
Confidence 999999999999999999985
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-37 Score=319.00 Aligned_cols=277 Identities=19% Similarity=0.236 Sum_probs=216.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------------eeeeccCCChhHHHHHHHhcCCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------------EFGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
+++||||||||||++|+++|+++|++| .++.+|++|.+++.+++++++||+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 378999999999999999999999876 456789999999999999999999
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC----eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV----LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|||||+.. ....+..++..++++|+.||.+||++|++.++ ++||+||++|||.+...| ++|+++..
T Consensus 82 v~h~aa~~---~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~------~~E~~~~~- 151 (357)
T d1db3a_ 82 VYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP------QKETTPFY- 151 (357)
T ss_dssp EEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS------BCTTSCCC-
T ss_pred EEEeeccc---ccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCC------cCCCCCCC-
Confidence 99999977 45566788999999999999999999998754 599999999998665555 89999998
Q ss_pred CCChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHH---------HHHhhhhhhccccccceecCCCCCchHHHHhh
Q 035631 499 TRSFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEG---------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLA 567 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 567 (684)
|.++||.||+++|.++. ....+.++++.|+.++++++ +...+............+|++.+.|+|
T Consensus 152 P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~----- 226 (357)
T d1db3a_ 152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW----- 226 (357)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC-----
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecc-----
Confidence 99999999999998854 44456777788877666542 112222222222334566889999999
Q ss_pred hcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH-----------h
Q 035631 568 RYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE-----------Q 636 (684)
Q Consensus 568 ~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------~ 636 (684)
+|++|+|++++.+++++.++.||+++++.+|+.|+++.+.+.+|....+....... .
T Consensus 227 ------------~~v~D~~~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (357)
T d1db3a_ 227 ------------GHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDA 294 (357)
T ss_dssp ------------EEHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSC
T ss_pred ------------eeechHHHHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccc
Confidence 99999999999999988888999999999999999999999998432221111000 0
Q ss_pred ------------hhhhccCC--CCCcCCchhh--hhcCCCchhHHHHHHHHHhhc
Q 035631 637 ------------AKVLVAPR--SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEP 675 (684)
Q Consensus 637 ------------~~~~~~~~--~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~ 675 (684)
.....|+. ....+|++|+ .++|.+..+++++|++++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~ 349 (357)
T d1db3a_ 295 PGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349 (357)
T ss_dssp TTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred cccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 00001110 1446799999 458888899999999998753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=3.7e-37 Score=318.45 Aligned_cols=284 Identities=17% Similarity=0.147 Sum_probs=222.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|||||||||||||++|+++|+++|++| +++.+|++|.+.+..++++.+||+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 699999999999999999999999864 4567899999999999999999999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC----------CeEEEEecceeeecCCCCCCCCC---CC-Ccc
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN----------VLLMNFATGCIYEYDSMHPQGSS---IG-FKE 492 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~----------~~~i~~SS~~vy~~~~~~~~~~~---~~-~~e 492 (684)
||.+ ....+..++..++++|+.|+.+++++|.+.+ .++||+||+.|||.....+..+. .+ ..|
T Consensus 81 Aa~~---~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e 157 (361)
T d1kewa_ 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred cccc---chhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence 9976 4566678899999999999999999998753 26999999999996654432221 22 345
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
.++.. |.+.||.+|+++|.++.. ...+.++++.|+.+++|++ +.+.+...+..+.++.++|+|.+.|+|
T Consensus 158 ~~~~~-p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~--- 233 (361)
T d1kewa_ 158 TTAYA-PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW--- 233 (361)
T ss_dssp TSCCC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEE---
T ss_pred CCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeC---
Confidence 66666 999999999999998544 4556677788888777654 345555556666677888999999999
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh---c
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL---V 641 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~---~ 641 (684)
+|++|+|++++.++++. .+++||+++++.+|+.|+++.+.+.++................. .
T Consensus 234 --------------i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (361)
T d1kewa_ 234 --------------LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPG 299 (361)
T ss_dssp --------------EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTT
T ss_pred --------------EEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCC
Confidence 99999999999999987 55699999999999999999998877643221111111111111 1
Q ss_pred cCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 642 APRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 642 ~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.+. ...+|++|+ .++|.+..+++++|++++++..+
T Consensus 300 ~~~-~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~ 336 (361)
T d1kewa_ 300 HDR-RYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336 (361)
T ss_dssp CCC-BCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHH
T ss_pred CCc-eeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Confidence 122 567899999 36898999999999999987644
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=314.54 Aligned_cols=278 Identities=16% Similarity=0.198 Sum_probs=218.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeee------------------ccCCChhHHHHHHHhcCCCeEEEcceecCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT------------------GRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~------------------~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~ 432 (684)
++||||||||||||++|+++|+++|++|..+. .|+.+.+.++.++. ++|+||||||..
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~VihlAa~~-- 76 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI--EVDQIYHLASPA-- 76 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCC--CCSEEEECCSCC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHc--CCCEEEECcccC--
Confidence 35899999999999999999999999985432 22333333333333 479999999976
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
....+..++...+++|+.|+.+|+++|++.++|+||+||++||+.....|..|.. +.|.++.. |.+.||.+|+++|.
T Consensus 77 -~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~-~~~~~~~~-p~~~Y~~sK~~~E~ 153 (312)
T d2b69a1 77 -SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDY-WGHVNPIG-PRACYDEGKRVAET 153 (312)
T ss_dssp -SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTC-CCBCCSSS-TTHHHHHHHHHHHH
T ss_pred -CchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccc-cCCCCCCC-CccHHHHHHHHHHH
Confidence 3444567888999999999999999999999999999999999976666644432 56666777 99999999999998
Q ss_pred hhhH--HhhhhhhhhhhhhhhhHHH-------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchh
Q 035631 513 LSYL--EIFVLVICIECLINFQVEG-------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLD 583 (684)
Q Consensus 513 ~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 583 (684)
++.. ...+..+.+.|+.+++|++ +.+.+...+..+.++.++|++.+.|+| +|++
T Consensus 154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~-----------------i~v~ 216 (312)
T d2b69a1 154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF-----------------QYVS 216 (312)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC-----------------EEHH
T ss_pred HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEcc-----------------EEHH
Confidence 8544 4556677888888887654 334444555566667888999999999 9999
Q ss_pred hHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--hhcCCCc
Q 035631 584 EMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKEFPEV 661 (684)
Q Consensus 584 D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~~~~~ 661 (684)
|+|++++.++++..++.||++++..+++.++++.+++.+|....+...+.. ...+. ...+|++|+ .++|.+.
T Consensus 217 D~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~-~~~~d~~k~~~~lgw~p~ 290 (312)
T d2b69a1 217 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA-----QDDPQ-KRKPDIKKAKLMLGWEPV 290 (312)
T ss_dssp HHHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC-----TTCCC-CCCBCCHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhhccCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCC-----CCCCC-eeeECHHHHHHHHCCCCC
Confidence 999999999988888999999999999999999999999976554332221 11223 567899999 4578889
Q ss_pred hhHHHHHHHHHhhcccc
Q 035631 662 LSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 662 ~~~~~~l~~~~~~~~~~ 678 (684)
.+++++|+++++++++.
T Consensus 291 ~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 291 VPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999887654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1e-36 Score=310.84 Aligned_cols=275 Identities=16% Similarity=0.157 Sum_probs=224.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------------eeeeccCCChhHHHHHHHhcCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------------EFGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~d~~d~~~~~~~~~~~~~d 421 (684)
|||||||||||||++|+++|+++||+| +++.+|+.+........... |
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGV--D 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTC--C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccccc--c
Confidence 799999999999999999999999743 56778888888777665554 9
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
.|+|+|+.. .......++...+++|+.|+.+++++|.+.++ ++||+||+++||.....+ ++|+++.. |.
T Consensus 79 ~vi~~a~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~------~~E~~~~~-p~ 148 (322)
T d1r6da_ 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS------WTESSPLE-PN 148 (322)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC------BCTTSCCC-CC
T ss_pred eEEeecccc---cccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCC------CCCCCCCC-CC
Confidence 999999866 55666788889999999999999999999987 599999999999776666 89999998 99
Q ss_pred ChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhccccc
Q 035631 501 SFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVV 573 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (684)
+.||.+|..+|.++.. ...+.++++.|+.+++|++ +.+.+...+..+.++.++|+|.+.|+|
T Consensus 149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~----------- 217 (322)
T d1r6da_ 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREW----------- 217 (322)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEE-----------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEcc-----------
Confidence 9999999999988443 4556777888888887644 345555556666678889999999999
Q ss_pred ccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCch
Q 035631 574 NIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652 (684)
Q Consensus 574 ~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 652 (684)
+|++|+|+++..+++++ .+++||+++++.+|+.|+++.+.+.+|.+......... ....+. ...+|++
T Consensus 218 ------i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----~~~~~~-~~~~d~~ 286 (322)
T d1r6da_ 218 ------VHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----RKGHDL-RYSLDGG 286 (322)
T ss_dssp ------EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----CTTCCC-BCCBCCH
T ss_pred ------EEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCC----CCCCCc-eeeeCHH
Confidence 99999999999999988 45699999999999999999999999976443221111 011122 4578999
Q ss_pred hh--hhcCCCchhHHHHHHHHHhhcccccc
Q 035631 653 KL--KKEFPEVLSIKDSIIKYVLEPNKKKN 680 (684)
Q Consensus 653 kl--~~~~~~~~~~~~~l~~~~~~~~~~~~ 680 (684)
|+ .++|.+..+++++|++++++++++++
T Consensus 287 k~~~~lg~~p~~~~eegI~~~i~w~~~n~~ 316 (322)
T d1r6da_ 287 KIERELGYRPQVSFADGLARTVRWYRENRG 316 (322)
T ss_dssp HHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 99 46888888999999999998776543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=4.4e-35 Score=303.65 Aligned_cols=311 Identities=21% Similarity=0.325 Sum_probs=243.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
..+|||||||||||||++|++.|+++ |++|++++|+..... ..+......++++++.+|+.|.+.+.+++....+|+
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVP-SLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI 82 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSS-CHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccH-HHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence 46799999999999999999999999 899999999753211 111111234579999999999999999988789999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|+|+|+......++.++...+.+|+.++.+++++|++.+....+++.||..+|...... .+.+++.+..|.++|+.+|
T Consensus 83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI--WGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS--SCBCTTSCBCCSSHHHHHH
T ss_pred hhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccc--cccccccccCCCCcccccc
Confidence 99999988776677888999999999999999999998756677777766666544432 3346677888999999999
Q ss_pred HHHHHHHHHHHHh---------cCCCEEEEeeCceeCCCCCC-CChHHHHHHHHHcCCceEEecCCCceEecccHHHHHH
Q 035631 170 AGAEMLVMAYHRS---------YGLPTITTRGNNVYGPNQFP-EKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239 (684)
Q Consensus 170 ~~~E~~~~~~~~~---------~~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 239 (684)
...|..+..+..+ +++.++++||+.+|||++.. ..+++.+++....+.+ .+++.+.+.++++|++|++.
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHHH
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccccccccc
Confidence 9999999877653 46789999999999998643 4577777877766555 45688889999999999999
Q ss_pred HHHHHHhcCC-----CCc--EEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCCCcceecCHHHHHh-cCCccc
Q 035631 240 AFDVILHRGV-----IGH--VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311 (684)
Q Consensus 240 ~i~~~~~~~~-----~~~--~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~ 311 (684)
++..++.+.. .+. .++...+...++.++++.+.+.++....... ....++.......+|++|+++ |||+|+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~d~skak~~LGw~P~ 318 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL-DGNAHPHEAHYLKLDCSKAKMQLGWHPR 318 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHHHHHCCCCC
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEE-cCCCCCCCcCeeeEcHHHHHHHHCCCcC
Confidence 9998887532 122 3344456779999999999999997654222 122233344556789999988 999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 035631 312 TPWEEGLKLTLEWYKK 327 (684)
Q Consensus 312 ~~~~e~i~~~i~~~~~ 327 (684)
++++++|+++++||++
T Consensus 319 ~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 319 WNLNTTLEYIVGWHKN 334 (356)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999986
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=2.1e-34 Score=288.02 Aligned_cols=273 Identities=23% Similarity=0.276 Sum_probs=232.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||++|+++|.++ |++|++++|+. +|+.|.+.+.+++...++|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence 68999999999999999999999 89999999852 48999999999997779999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
+|+......+...+......|+....++.+.++... .+++++||..+|+.....+ ..|.++..|.+.|+.+|...
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~---~~e~~~~~~~~~~~~~k~~~ 133 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEP---ITEFDEVNPQSAYGKTKLEG 133 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSC---BCTTSCCCCCSHHHHHHHHH
T ss_pred eccccccccccccchhhccccccccccccccccccc--ccccccccceeeecccccc---ccccccccchhhhhhhhhHH
Confidence 999887766777788889999999999999998865 7899999999998766544 36777888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCCCc
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 252 (684)
|.+++++ +.+++++||+++||++. ++...++..+..++++.+.+ ++.++++|++|+++++..++++... +
T Consensus 134 e~~~~~~----~~~~~i~R~~~vyG~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~-g 203 (281)
T d1vl0a_ 134 ENFVKAL----NPKYYIVRTAWLYGDGN---NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY-G 203 (281)
T ss_dssp HHHHHHH----CSSEEEEEECSEESSSS---CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC-E
T ss_pred HHHHHHh----CCCccccceeEEeCCCc---ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc-C
Confidence 9888544 78899999999999975 67888888888888887765 4789999999999999999988664 5
Q ss_pred EEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCCCCC-----CcceecCHHHHHh-cCCcccCCHHHHHHHHHHHHH
Q 035631 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN-----DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYK 326 (684)
Q Consensus 253 ~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i~~~~ 326 (684)
+||+++++.+|+.|+++.+.+.+|.+.. +...+...+. +....+|++|+++ +||+|. +|+++|++++++++
T Consensus 204 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~--i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 204 TFHCTCKGICSWYDFAVEIFRLTGIDVK--VTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHCCCCE--EEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred ceeEeCCCccchHHHHHHHHHHhCCCce--EEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 9999999999999999999999998764 3322222221 1223589999998 999997 99999999999985
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.6e-35 Score=298.89 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=212.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
|||||||||||||++|++.|+++|++| .++++|++|.+.+.++++..+||+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 799999999999999999999999876 5678999999999999998889999999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
||.. .+..+..++...+++|+.||.++|++|++.++ ++|++||++||++....+ ..|+++...|.+.|+.
T Consensus 81 Aa~~---~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~------~~e~~~~~~p~~~Y~~ 151 (338)
T d1udca_ 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIP------YVESFPTGTPQSPYGK 151 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS------BCTTSCCCCCSSHHHH
T ss_pred CCcc---chhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccc------cccccccCCCcchHHH
Confidence 9966 45666778999999999999999999999998 599999999998766655 5555555448999999
Q ss_pred hhHhHhhhhhH---HhhhhhhhhhhhhhhhHHHH---------------HHhhhhhh-ccccccceecC------CCCCc
Q 035631 506 TKAMVTFLSYL---EIFVLVICIECLINFQVEGL---------------LKAYENVC-TLRLRMPISSD------LSNPR 560 (684)
Q Consensus 506 sK~~~E~~~~~---~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-~~~~~~~~~g~------~~~~~ 560 (684)
+|..+|.++.. +..+.++.+.|+.++++.+. .+.+.... .....+.++|+ +.+.|
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~r 231 (338)
T d1udca_ 152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231 (338)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEE
T ss_pred HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCcee
Confidence 99999987432 22355666777776664321 22222211 12223445553 55667
Q ss_pred hHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHh
Q 035631 561 NFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQ 636 (684)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 636 (684)
+| +|++|+++++..+.... ..++||+++++++|+.|+++.+.+.+|.+......+..
T Consensus 232 d~-----------------i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~-- 292 (338)
T d1udca_ 232 DY-----------------IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR-- 292 (338)
T ss_dssp CE-----------------EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCC--
T ss_pred eE-----------------EEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCC--
Confidence 77 99999999888776533 34689999999999999999999999976554322211
Q ss_pred hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 637 AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 637 ~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
..... ...+|++|+ .++|.+..+++++|++++++.++++
T Consensus 293 ---~~~~~-~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~ 333 (338)
T d1udca_ 293 ---EGDLP-AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp ---TTCCS-BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred ---CCCCC-EeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhch
Confidence 01112 567899999 3688889999999999999887754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6.9e-35 Score=302.72 Aligned_cols=279 Identities=18% Similarity=0.189 Sum_probs=220.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
++|||||||||||||++|+++|+++||+| .+..+|+++.+.+..+++++ |+|||+|+...
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~Vih~a~~~~ 91 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADMG 91 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcC--CeEeecccccc
Confidence 56899999999999999999999999987 55668899999998888876 99999998662
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCC-CCccCCCCCCCCChhhhhhHh
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSI-GFKEDDEPNFTRSFYSKTKAM 509 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~-~~~e~~~~~~p~~~Y~~sK~~ 509 (684)
........+......|+.++.+++++|.+.++ ++|++||+.+|+.....+..+.. +..|.++.. |.+.||.+|++
T Consensus 92 --~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~-p~~~Yg~sK~~ 168 (363)
T d2c5aa1 92 --GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAE-PQDAFGLEKLA 168 (363)
T ss_dssp --CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBC-CSSHHHHHHHH
T ss_pred --cccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCC-CCCHHHHHHHH
Confidence 22333577788999999999999999999998 59999999999976665543332 345666666 99999999999
Q ss_pred HhhhhhH--HhhhhhhhhhhhhhhhHHH----------HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 510 VTFLSYL--EIFVLVICIECLINFQVEG----------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 510 ~E~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
+|.+++. ...+.++++.|+.++++.+ .................+|+|.+.|+|
T Consensus 169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~--------------- 233 (363)
T d2c5aa1 169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSF--------------- 233 (363)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECC---------------
T ss_pred HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEE---------------
Confidence 9988544 4556677888888777543 122222233334446677899999999
Q ss_pred CccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh--h
Q 035631 578 SMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--K 655 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~ 655 (684)
+|++|++++++.+++++.+++||++++..+|+.|+++.+.+.+|.+..+...+... ... ...+|++|+ .
T Consensus 234 --i~v~D~~~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~------~~~-~~~~d~ska~~~ 304 (363)
T d2c5aa1 234 --TFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE------GVR-GRNSDNNLIKEK 304 (363)
T ss_dssp --EEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC------CCS-BCEECCHHHHHH
T ss_pred --eehhHHHHHHHHHHhCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCC------Ccc-ccccCHHHHHHH
Confidence 99999999999999988888999999999999999999999999766554333221 112 345799999 4
Q ss_pred hcCCCchhHHHHHHHHHhhccc
Q 035631 656 KEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 656 ~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
++|.+..+|+++|+++++++++
T Consensus 305 LGw~p~~sleegi~~ti~w~~~ 326 (363)
T d2c5aa1 305 LGWAPNMRLKEGLRITYFWIKE 326 (363)
T ss_dssp HSCCCCCCHHHHHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHH
Confidence 6888889999999999987654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=6.3e-34 Score=292.39 Aligned_cols=307 Identities=18% Similarity=0.137 Sum_probs=225.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCC-CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHP-SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
.+.+++|||||||||||++|+++|+++ |++|+++.|+..... ...... .........+.+|+.|.+.+.+++ .+
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~ 83 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--KG 83 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--TT
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--cc
Confidence 345689999999999999999999999 899999998642111 111100 111223455778999999998888 79
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCC-C--------------
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESD-I-------------- 151 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~-------------- 151 (684)
+|+|+|+++.... ..++...+..|+.++.+++++|.+.+.+++|||+||+.+++....... .
T Consensus 84 ~~~v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 160 (342)
T d1y1pa1 84 AAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDK 160 (342)
T ss_dssp CSEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred chhhhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccc
Confidence 9999999997653 356778889999999999999999766999999999876432221110 0
Q ss_pred --CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCceEEecC
Q 035631 152 --GNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG--LPTITTRGNNVYGPNQF---PEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 152 --~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
...|..+..|.++|+.+|..+|.+++.+.++++ ++++++||+.+|||... ....+..++..+.+++.... ..
T Consensus 161 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~ 239 (342)
T d1y1pa1 161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LA 239 (342)
T ss_dssp HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HH
T ss_pred cccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cC
Confidence 012445566778899999999999999988764 66888999999998532 23467777777777775544 33
Q ss_pred CCceEecccHHHHHHHHHHHHhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CCCCcceecCHHHH
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PFNDHRYFLDDQKL 303 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~~k~ 303 (684)
+...++|+|++|+|++++.+++++..++.|++++++.+++.|+++.|.+.++.... ........ .........+.+++
T Consensus 240 ~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~-~~~~~~~~~~~~~~~~~~s~~~~ 318 (342)
T d1y1pa1 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF-PADFPDQGQDLSKFDTAPSLEIL 318 (342)
T ss_dssp TCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCC-CCCCCCCCCCCCEECCHHHHHHH
T ss_pred CccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcC-CccCCccCcccccccchHHHHHH
Confidence 45668999999999999999998777777889999999999999999998743211 11111111 11111122345556
Q ss_pred HhcCCcccCCHHHHHHHHHHH
Q 035631 304 KRLGWKEKTPWEEGLKLTLEW 324 (684)
Q Consensus 304 ~~lg~~p~~~~~e~i~~~i~~ 324 (684)
+.|||.|.++++++|+++++.
T Consensus 319 k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 319 KSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp HHTTCCSCCCHHHHHHHHHCC
T ss_pred HHcCCCCCcCHHHHHHHHHHh
Confidence 779999999999999999864
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.2e-34 Score=296.10 Aligned_cols=281 Identities=15% Similarity=0.095 Sum_probs=220.6
Q ss_pred ccCCceEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------------eeeeccCCChhHHHHHHHh
Q 035631 367 CGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------------EFGTGRLEDKNSLLDDMKR 417 (684)
Q Consensus 367 ~~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~d~~d~~~~~~~~~~ 417 (684)
..+++++|||||||||||++|+++|+++||+| .++.+|+.|...+......
T Consensus 12 ~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 91 (341)
T d1sb8a_ 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 91 (341)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc
Confidence 33445689999999999999999999999987 3456788888887776665
Q ss_pred cCCCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 418 VRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 418 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
. +.|+|+++.. .+..+..++...+++|+.|+.+|+++|.+.++ ++||+||+.|||..+..| ++|+++.
T Consensus 92 ~--~~v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~------~~E~~~~ 160 (341)
T d1sb8a_ 92 V--DYVLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP------KVEDTIG 160 (341)
T ss_dssp C--SEEEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS------BCTTCCC
T ss_pred c--cccccccccc---cccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCC------ccCCCCC
Confidence 5 9999999866 45667788899999999999999999999998 699999999999776666 8999998
Q ss_pred CCCCChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHH---------HHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 497 NFTRSFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEG---------LLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
. |.+.|+.+|.++|.++. ....+.++++.|+.++++++ +.......+..+.++.++|+|.+.|+|
T Consensus 161 ~-p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~--- 236 (341)
T d1sb8a_ 161 K-PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF--- 236 (341)
T ss_dssp C-CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC---
T ss_pred C-CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEE---
Confidence 8 99999999999998854 34445677788877666543 333444455556668888999999999
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC---ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhcc
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVA 642 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 642 (684)
+|++|+|+++..++... .++.||++++..+|+.|+++.+.+.++.+.................
T Consensus 237 --------------i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 302 (341)
T d1sb8a_ 237 --------------CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGD 302 (341)
T ss_dssp --------------EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTC
T ss_pred --------------EEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCC
Confidence 99999999999998765 4569999999999999999999998884322111111100001111
Q ss_pred CCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 643 PRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 643 ~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
.. ...+|++|+ .++|.+..+++++|+++++++.+
T Consensus 303 ~~-~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 303 VR-HSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp CS-BCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred cC-eeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 22 457899999 35888889999999999987664
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.1e-33 Score=288.64 Aligned_cols=278 Identities=14% Similarity=0.111 Sum_probs=218.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
+||||||||||||++|+++|+++||+| +++.+|++|.+.+...+....+++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 389999999999999999999999987 45788999999999999999899999999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
+.. .......++..+++.|+.|+.++|++|++.++ ++++.||+.+|+.....+ .+|+++.. |.+.|+.
T Consensus 81 ~~~---~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~------~~E~~~~~-p~~~Y~~ 150 (321)
T d1rpna_ 81 AQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER------QDENTPFY-PRSPYGV 150 (321)
T ss_dssp SCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS------BCTTSCCC-CCSHHHH
T ss_pred ccc---cccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC------CCCCCCcc-ccChhHH
Confidence 866 45666788899999999999999999999885 488888888888666555 78888888 9999999
Q ss_pred hhHhHhhhh--hHHhhhhhhhhhhhhhhhHHH-----HHHhhhh----hhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 506 TKAMVTFLS--YLEIFVLVICIECLINFQVEG-----LLKAYEN----VCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 506 sK~~~E~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
+|+++|.+. +....+..+++.|+.+++++. ....+.. ..........+|++.+.|+|
T Consensus 151 sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~------------ 218 (321)
T d1rpna_ 151 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW------------ 218 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC------------
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEcc------------
Confidence 999999885 445556677777777666542 1112222 12222234467899999999
Q ss_pred cCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCccccc-CCchhHhhhhhccCCCCCcCCchh
Q 035631 575 IPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWS-NFNLEEQAKVLVAPRSNNHMDVTK 653 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k 653 (684)
+|++|+|++++.+++++..+.||+++++..|+.++++.+.+.+|...+.. .+..... ...... ...+|++|
T Consensus 219 -----i~v~D~~~~~~~~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--rp~~~~-~~~~d~~k 290 (321)
T d1rpna_ 219 -----GFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF--RPAEVD-VLLGNPAK 290 (321)
T ss_dssp -----EEHHHHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC--CSSCCC-BCCBCTHH
T ss_pred -----EEeHHHHHHHHHHHhcCCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCCC--CCCccC-CccCCHHH
Confidence 99999999999999998889999999999999999999999998654322 1111100 001112 56779999
Q ss_pred h--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 654 L--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 654 l--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
+ .++|.+..+|+++|++++++..++.
T Consensus 291 ~~k~lG~~P~~~l~e~i~~tv~~~l~~~ 318 (321)
T d1rpna_ 291 AQRVLGWKPRTSLDELIRMMVEADLRRV 318 (321)
T ss_dssp HHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCcCCCHHHHHHHHHHHHHHHh
Confidence 9 3588888899999999998866543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-33 Score=290.59 Aligned_cols=286 Identities=13% Similarity=0.088 Sum_probs=212.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eE-------------------eeeeccCCChhHHHH-HHHhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AF-------------------EFGTGRLEDKNSLLD-DMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v-------------------~~~~~d~~d~~~~~~-~~~~~~~d~Vih~a~~~ 430 (684)
|||||||||||||++|+++|+++|+ +| +++.+|+++.+.+.+ .+++ +|+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~--~d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK--CDVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHH--CSEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhC--CCccccccccc
Confidence 6999999999999999999999995 44 578899998877665 4554 59999999976
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhH
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMV 510 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~ 510 (684)
.......++..++++|+.|+.+++++|.+.+++++|+||+.+|+........+..+.....+...|.+.|+.||.++
T Consensus 79 ---~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~ 155 (342)
T d2blla1 79 ---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL 155 (342)
T ss_dssp ---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred ---cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccch
Confidence 44556678889999999999999999999999999999999999776655444333333333334889999999999
Q ss_pred hhhhhH--HhhhhhhhhhhhhhhhHHH-------------HHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc
Q 035631 511 TFLSYL--EIFVLVICIECLINFQVEG-------------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI 575 (684)
Q Consensus 511 E~~~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (684)
|.+... +..+.++.+.|+..+++.. ....+...+..+.++.++|++.+.|+|
T Consensus 156 E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~------------- 222 (342)
T d2blla1 156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCF------------- 222 (342)
T ss_dssp HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEEC-------------
T ss_pred hhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeee-------------
Confidence 998544 4445666666666555332 233333344445556777888888888
Q ss_pred CCCccchhhHHHHHHHHHhcC----ccceeEecCCC-cccHHHHHHHHHhhcCCcccccCCchhHh----------hhhh
Q 035631 576 PNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPG-VISHNEILELYKEYIDPQLKWSNFNLEEQ----------AKVL 640 (684)
Q Consensus 576 ~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~ 640 (684)
+|++|+|+++..+++++ .+++||+++++ .+|+.|+++.+.+.+|.......++.... ....
T Consensus 223 ----i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (342)
T d2blla1 223 ----TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGY 298 (342)
T ss_dssp ----EEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC----------
T ss_pred ----cccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccccc
Confidence 99999999999999874 34599998875 58999999999999986544433321110 0011
Q ss_pred ccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcccccc
Q 035631 641 VAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKKN 680 (684)
Q Consensus 641 ~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~~ 680 (684)
..+. ...+|++|+ .++|.+..+++++|++++++++++.+
T Consensus 299 ~~~~-~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 299 QDVE-HRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp --CC-CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred cccc-ccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence 1122 446799999 46788888999999999998766543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.8e-34 Score=291.69 Aligned_cols=280 Identities=15% Similarity=0.152 Sum_probs=218.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
||||||||||||||++|+++|+++|++| +++.+|+.|.+.+..++..+ +.|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~--~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhh--hhhhh
Confidence 5799999999999999999999999854 45678999999999999887 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCC---C---CCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSM---H---PQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~---~---~~~~~~~~~e~~~~~~p 499 (684)
+|+.. ....+..++..++++|+.|+.+++++|.+.+.++|++||+++||.... . .......++|+++.. |
T Consensus 80 ~a~~~---~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~-p 155 (346)
T d1oc2a_ 80 YAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN-P 155 (346)
T ss_dssp CCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC-C
T ss_pred hhhcc---cccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCC-C
Confidence 99966 455567888999999999999999999999999999999999984211 1 112223477888887 9
Q ss_pred CChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH-----HHHhhhhhhccccccceecCCCCCchHHHHhhhcccc
Q 035631 500 RSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG-----LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKV 572 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (684)
.+.||.+|+++|.++.. ...+.++++.|+.+++|++ ...........+..+.++|++.+.|+|
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~---------- 225 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDW---------- 225 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEEC----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccc----------
Confidence 99999999999988544 4455677778888777643 233333334455567788999999999
Q ss_pred cccCCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCc
Q 035631 573 VNIPNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651 (684)
Q Consensus 573 ~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 651 (684)
+|++|+|++++.+++++ .++.||+++++..++.++++.+.+.++........... ...... ...+|+
T Consensus 226 -------i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~-~~~~d~ 293 (346)
T d1oc2a_ 226 -------IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAGHDL-RYAIDA 293 (346)
T ss_dssp -------EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTTCCC-BCCBCC
T ss_pred -------cchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCC----CCCCCc-eeeeCH
Confidence 99999999999998877 66799999999999999999999999864332221111 011112 456799
Q ss_pred hhh--hhcCCCc-hhHHHHHHHHHhhcccc
Q 035631 652 TKL--KKEFPEV-LSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 652 ~kl--~~~~~~~-~~~~~~l~~~~~~~~~~ 678 (684)
+|+ .++|.+. ++++++|++++++.+++
T Consensus 294 ~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 294 SKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp HHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 999 4578764 57999999999876653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.4e-33 Score=282.04 Aligned_cols=273 Identities=18% Similarity=0.185 Sum_probs=220.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeee---eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFG---TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRT 448 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~---~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 448 (684)
|||||||||||||++|+++|+++||+|... ..|++|.+.+++++++.++|+|||+|+.. ..+.+...+......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~---~~~~~~~~~~~~~~~ 78 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAYKI 78 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccc---ccccccccchhhccc
Confidence 799999999999999999999999998543 45789999999999999999999999976 566777888899999
Q ss_pred chhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhhhhh
Q 035631 449 NVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECL 528 (684)
Q Consensus 449 nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~ 528 (684)
|+..+..+++.+.....+++++||+.||+.....+ .+|.+++. |.+.|+.+|..+|.+... .+.+..+.|+
T Consensus 79 n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~------~~e~~~~~-~~~~~~~~k~~~e~~~~~--~~~~~~i~R~ 149 (281)
T d1vl0a_ 79 NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP------ITEFDEVN-PQSAYGKTKLEGENFVKA--LNPKYYIVRT 149 (281)
T ss_dssp HTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC------BCTTSCCC-CCSHHHHHHHHHHHHHHH--HCSSEEEEEE
T ss_pred ccccccccccccccccccccccccceeeecccccc------cccccccc-chhhhhhhhhHHHHHHHH--hCCCccccce
Confidence 99999999999999999999999999998776666 88999988 999999999999876432 3345566666
Q ss_pred hhhhHHH--HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCC
Q 035631 529 INFQVEG--LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNP 606 (684)
Q Consensus 529 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~ 606 (684)
..+++.+ ....+...+.....+.+++ .+.++| +|++|+|+++..++++...|+||++++
T Consensus 150 ~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------i~v~D~~~~~~~~~~~~~~g~~~~~~~ 210 (281)
T d1vl0a_ 150 AWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTP-----------------TSTVDLARVVLKVIDEKNYGTFHCTCK 210 (281)
T ss_dssp CSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECC-----------------EEHHHHHHHHHHHHHHTCCEEEECCCB
T ss_pred eEEeCCCcccccchhhhhccCCceeecC--Cceecc-----------------chhhhhhhhhhhhhhhcccCceeEeCC
Confidence 6555433 2222222222222233333 244555 999999999999999988899999999
Q ss_pred CcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhhhhcCC-CchhHHHHHHHHHhhcc
Q 035631 607 GVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFP-EVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 607 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl~~~~~-~~~~~~~~l~~~~~~~~ 676 (684)
+.+|+.|+++.+++.+|.+..+.+++..+.+..+.||. +.++|++|++..++ .+++|+++|+++++.++
T Consensus 211 ~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~-~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 211 GICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPK-YSVLRNYMLELTTGDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp SCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCS-BCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCcc-ccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999999988888777666665566777 77899999943333 55699999999998764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-33 Score=287.14 Aligned_cols=276 Identities=20% Similarity=0.218 Sum_probs=218.3
Q ss_pred EE-EEEcCCcchhHHHHHHHHhcCCeE------------------------------eeeeccCCChhHHHHHHHhcCCC
Q 035631 373 KF-LIYGKTGWIGGLLGKYCKDKGIAF------------------------------EFGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 373 ~i-lItG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~d~~d~~~~~~~~~~~~~d 421 (684)
|| ||||||||||++|+++|+++||+| .++.+|++|.+.+..++.+.+++
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 81 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccc
Confidence 78 999999999999999999999976 36778999999999999999999
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC----eEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV----LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+|+|+|+.. .+.....++..++++|+.||.+++++|+++++ ++||+||++|||.....+ ++|+++..
T Consensus 82 ~v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~------~~E~~~~~ 152 (347)
T d1t2aa_ 82 EIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP------QKETTPFY 152 (347)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS------BCTTSCCC
T ss_pred eeeeeeecc---ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCC------CCCCCCCC
Confidence 999999866 56666788889999999999999999998764 699999999999665555 89999998
Q ss_pred CCCChhhhhhHhHhhhhhH--HhhhhhhhhhhhhhhhHHH---------HHHhhhhhhccccccceecCCCCCchHHHHh
Q 035631 498 FTRSFYSKTKAMVTFLSYL--EIFVLVICIECLINFQVEG---------LLKAYENVCTLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
|.++||.||+++|++++. +..+....+.|+.++++++ ....+.........+..+|++.+.|+|
T Consensus 153 -P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~---- 227 (347)
T d1t2aa_ 153 -PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW---- 227 (347)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC----
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee----
Confidence 999999999999998544 5556667777776665532 222233333344456778899999999
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhh---------
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQA--------- 637 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------- 637 (684)
+|++|+|+++..++++...+.|+++.....++.+....+...++..............
T Consensus 228 -------------i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
T d1t2aa_ 228 -------------GHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVH 294 (347)
T ss_dssp -------------EEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEE
T ss_pred -------------eEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCce
Confidence 9999999999999998877899999999999999999999888865433222111000
Q ss_pred ----hhhccCC--CCCcCCchhh--hhcCCCchhHHHHHHHHHhhc
Q 035631 638 ----KVLVAPR--SNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEP 675 (684)
Q Consensus 638 ----~~~~~~~--~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~ 675 (684)
....+|. ....+|++|+ .++|.+..+++++|++++++.
T Consensus 295 ~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~ 340 (347)
T d1t2aa_ 295 VTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 340 (347)
T ss_dssp EEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred eeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 0111111 1346799999 458889999999999998753
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-33 Score=286.67 Aligned_cols=284 Identities=16% Similarity=0.120 Sum_probs=205.3
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
.|||||||||||++|+++|+++|++| +++.+|++|.+.+..++...+||+|||||
T Consensus 3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 82 (347)
T d1z45a2 3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA 82 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence 49999999999999999999999977 45778999999999999999999999999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
|.. .......++..+..+|+.++.+|+++|++.++ ++|++||++|||.....+ ...+++|+++.. |.+.||.+
T Consensus 83 a~~---~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~--~~~~~~e~~~~~-p~~~Y~~s 156 (347)
T d1z45a2 83 GLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFP--NMIPIPEECPLG-PTNPYGHT 156 (347)
T ss_dssp SCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGST--TCCSBCTTSCCC-CCSHHHHH
T ss_pred ccc---cccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCC--CCCccccccCCC-CCChhHhH
Confidence 976 34556778889999999999999999999997 699999999998654432 233478888887 99999999
Q ss_pred hHhHhhhhhHH----hhhhhhhhhhhhhhhHHH---------------HHHhhhhhh-ccccccceecCCCCCchHHHHh
Q 035631 507 KAMVTFLSYLE----IFVLVICIECLINFQVEG---------------LLKAYENVC-TLRLRMPISSDLSNPRNFVTKL 566 (684)
Q Consensus 507 K~~~E~~~~~~----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~ 566 (684)
|.++|++.... ..+.++.+.|+.++++.. +.+.+.... ....++.++|++.+.++|
T Consensus 157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~---- 232 (347)
T d1z45a2 157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG---- 232 (347)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS----
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC----
Confidence 99999885433 234455666666554321 121211111 123335556655444333
Q ss_pred hhcccccccCCCccchhhHHHHHHHHHhcC--------ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhh
Q 035631 567 ARYNKVVNIPNSMTVLDEMLPIAIEMARRN--------CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAK 638 (684)
Q Consensus 567 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--------~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 638 (684)
....+++|+.|++.+++.+++.. ..++||+++++++|+.|+++.+.+.+|.+......+..
T Consensus 233 -------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---- 301 (347)
T d1z45a2 233 -------TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR---- 301 (347)
T ss_dssp -------SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------
T ss_pred -------ceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC----
Confidence 00012377777888888877632 34689999999999999999999999976554322211
Q ss_pred hhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccccc
Q 035631 639 VLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNKKK 679 (684)
Q Consensus 639 ~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~~~ 679 (684)
...+. ...+|++|+ .++|.+..+++++|++++++..+++
T Consensus 302 -~~~~~-~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~np 342 (347)
T d1z45a2 302 -AGDVL-NLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP 342 (347)
T ss_dssp ----CC-CCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred -CCCCC-EeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence 11122 557899999 3678888999999999999887764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.5e-33 Score=294.11 Aligned_cols=280 Identities=14% Similarity=0.079 Sum_probs=205.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------------------------eeeeccCCChhH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------------------------EFGTGRLEDKNS 410 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------------------------~~~~~d~~d~~~ 410 (684)
|||||||||||||++|+++|+++||+| +++.+|++|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 699999999999999999999999987 356789999999
Q ss_pred HHHHHHhcCCCeEEEcceecCCCCcccc---ccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCC
Q 035631 411 LLDDMKRVRPTHVLNAAGITGRPNVDWC---ESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQG 485 (684)
Q Consensus 411 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~ 485 (684)
++.++++++||+|||+||.. ....+ ...+..++++|+.||.++|++|++.++ ++++.||..+|+.... +..
T Consensus 82 l~~~~~~~~~d~ViHlAa~~---~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~ 157 (393)
T d1i24a_ 82 LAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIE 157 (393)
T ss_dssp HHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBC
T ss_pred HHHHHHhhcchheecccccc---ccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccc
Confidence 99999999999999999966 33332 345667899999999999999999876 3777777777764332 111
Q ss_pred CCCC-C-------ccCCCCCCCCChhhhhhHhHhhhh--hHHhhhhhhhhhhhhhhhHHH--------------------
Q 035631 486 SSIG-F-------KEDDEPNFTRSFYSKTKAMVTFLS--YLEIFVLVICIECLINFQVEG-------------------- 535 (684)
Q Consensus 486 ~~~~-~-------~e~~~~~~p~~~Y~~sK~~~E~~~--~~~~~~~~~~~~~~~~~~~~~-------------------- 535 (684)
+... . ++..+.. |.+.||.+|+++|.++ +....+.+..+.|+.++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~-p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T d1i24a_ 158 EGYITITHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF 236 (393)
T ss_dssp SSEEEEEETTEEEEEECCCC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred cccccccccccccccccccc-cccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence 1110 1 1223455 8899999999999884 445556777788888777543
Q ss_pred --HHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC-ccceeEe--cCCCccc
Q 035631 536 --LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRGAWNF--TNPGVIS 610 (684)
Q Consensus 536 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g~~ni--~~~~~~s 610 (684)
....+......+.++.++|++.+.|+| +|++|+|+++..++++. ..|.|++ ++++.+|
T Consensus 237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~-----------------v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~s 299 (393)
T d1i24a_ 237 GTALNRFCVQAAVGHPLTVYGKGGQTRGY-----------------LDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 299 (393)
T ss_dssp CCHHHHHHHHHHHTCCEEEETTSCCEEEE-----------------EEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEE
T ss_pred ccchhhhhHHhhcCCeeEEeeeccccccc-----------------ccccchHHHHHHHHHhhcccceeeeecCCCCeeE
Confidence 123333344455567888999999999 99999999999999876 5565554 4567899
Q ss_pred HHHHHHHHHhhcCC---cccccCCchhHhhhhhccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhhccc
Q 035631 611 HNEILELYKEYIDP---QLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 611 ~~e~~~~i~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
+.|+++.+.+..+. .......... ....... ....|++|+ +++|.+..++++++++++++..+
T Consensus 300 i~el~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~ 366 (393)
T d1i24a_ 300 VNELASLVTKAGSKLGLDVKKMTVPNP---RVEAEEH-YYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQ 366 (393)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEECCS---SCSCSSC-CCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCcceeeccCC---CCCCCcc-EecCCHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence 99999999876542 2222211111 1111223 567899999 78999999999999998876544
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.4e-32 Score=281.42 Aligned_cols=278 Identities=15% Similarity=0.115 Sum_probs=207.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------------eeeeccCCChhHHHHHHHhcC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------------EFGTGRLEDKNSLLDDMKRVR 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------------~~~~~d~~d~~~~~~~~~~~~ 419 (684)
..||||||||||||++|+++|+++|++| .++.+|++|.+.+.+.+.+.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 3599999999999999999999999976 356789999999999999998
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
+++|+|+||.. ....+..+|...+++|+.|+.+++++|.+.++ +++|+||+.+|+...... ..++.+...
T Consensus 82 ~~~i~h~Aa~~---~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~------~~~~~~~~~ 152 (346)
T d1ek6a_ 82 FMAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP------LDEAHPTGG 152 (346)
T ss_dssp EEEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS------BCTTSCCCC
T ss_pred ccccccccccc---CcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccc------ccccccccc
Confidence 89999999976 46667788999999999999999999999998 599999999998655443 233333333
Q ss_pred CCChhhhhhHhHhhhhhHH---hhhhhhhhhhhhhhhHHHH---------------HHhhhhh-hccccccceec-----
Q 035631 499 TRSFYSKTKAMVTFLSYLE---IFVLVICIECLINFQVEGL---------------LKAYENV-CTLRLRMPISS----- 554 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~~~~---~~~~~~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~g----- 554 (684)
|.++|+.+|..+|...... ..+....+.|+.++++... .+.+... ......+.++|
T Consensus 153 ~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~ 232 (346)
T d1ek6a_ 153 CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT 232 (346)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred cCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccC
Confidence 8899999999999885432 2345556666665554221 1111111 11122233333
Q ss_pred -CCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCccccc
Q 035631 555 -DLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWS 629 (684)
Q Consensus 555 -~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 629 (684)
++.+.|+| +|++|+|+++..++... ..++||++++..+|+.|+++.+.+.+|.+....
T Consensus 233 ~~g~~~Rdf-----------------i~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~ 295 (346)
T d1ek6a_ 233 EDGTGVRDY-----------------IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK 295 (346)
T ss_dssp SSSSCEECE-----------------EEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE
T ss_pred CCCCeeEeE-----------------EEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeE
Confidence 34555677 99999999998876543 345899999999999999999999999765543
Q ss_pred CCchhHhhhhhccCCCCCcCCchhhh--hcCCCchhHHHHHHHHHhhcccccc
Q 035631 630 NFNLEEQAKVLVAPRSNNHMDVTKLK--KEFPEVLSIKDSIIKYVLEPNKKKN 680 (684)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~d~~kl~--~~~~~~~~~~~~l~~~~~~~~~~~~ 680 (684)
..+..+ .... ...+|++|++ ++|.+..+++++|++++++++++++
T Consensus 296 ~~~~~~-----~e~~-~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~ 342 (346)
T d1ek6a_ 296 VVARRE-----GDVA-ACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342 (346)
T ss_dssp EECCCT-----TCCS-EECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred ECCCCC-----CCCC-EeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHh
Confidence 322211 0112 4567999993 5788888999999999999887643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.8e-31 Score=267.79 Aligned_cols=293 Identities=22% Similarity=0.236 Sum_probs=200.5
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH-HHHhh---ccCCCCE
Q 035631 15 ILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL-MNYLL---VSEGIDT 89 (684)
Q Consensus 15 VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~-~~~~~---~~~~~d~ 89 (684)
|||||||||||++|+++|+++ |+ +|+++++.........+... . ..|..+.+. ..... ....+++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDL---N-----IADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTS---C-----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhccccc---c-----hhhhccchHHHHHHhhhhcccchhh
Confidence 899999999999999999999 64 79998754332222221111 1 112222222 22222 2247889
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|+|+|+..... ..+.......|+.++.+++++++..+ + ++++.||..+|+...... ..+..+..|.+.|+.+|
T Consensus 72 i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~---~~~~~~~~~~~~Y~~~K 144 (307)
T d1eq2a_ 72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDF---IESREYEKPLNVYGYSK 144 (307)
T ss_dssp EEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCB---CSSGGGCCCSSHHHHHH
T ss_pred hhhhccccccc--cccccccccccccccccccccccccc-c-cccccccccccccccccc---ccccccccccccccccc
Confidence 99999865543 35666778899999999999999987 4 577777777766554433 24555677889999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCceEE-ecCCCceEecccHHHHHHHHHHH
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFP----EKLIPKFILLAMKGQQLPI-HGNGSNVRSYLYCADVAEAFDVI 244 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~i~~~ 244 (684)
..+|.+++.++++++++++++||+++|||.... ..++..+...+..++...+ .+++...++|+|++|++.++..+
T Consensus 145 ~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~ 224 (307)
T d1eq2a_ 145 FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 224 (307)
T ss_dssp HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHH
T ss_pred chhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHH
Confidence 999999999999999999999999999996532 2456677777777765544 47778889999999999999999
Q ss_pred HhcCCCCcEEEecCCCccCHHHHHHHHHHHhCCCCCcceeeccCC-CCCCcceecCHHHHHh-cCCcccCCHHHHHHHHH
Q 035631 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR-PFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTL 322 (684)
Q Consensus 245 ~~~~~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~-lg~~p~~~~~e~i~~~i 322 (684)
+.++. .+.||+++++..|+.|+++.+.+..+............. .........|++|+++ +||+|.++++|+|++++
T Consensus 225 ~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i 303 (307)
T d1eq2a_ 225 LENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYM 303 (307)
T ss_dssp HHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHH
T ss_pred hhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 98765 469999999999999999999887653211111111111 1112223469999998 89999999999999999
Q ss_pred HHH
Q 035631 323 EWY 325 (684)
Q Consensus 323 ~~~ 325 (684)
+|+
T Consensus 304 ~w~ 306 (307)
T d1eq2a_ 304 AWL 306 (307)
T ss_dssp HHT
T ss_pred HhC
Confidence 996
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.5e-32 Score=275.66 Aligned_cols=277 Identities=15% Similarity=0.089 Sum_probs=214.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeee----eccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHh
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFG----TGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETI 446 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~----~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 446 (684)
++||||||||||||++|+++|+++|+.|... ..|+.|.+.+.++++..++|.|||+|+..+ ........+..++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~--~~~~~~~~~~~~~ 79 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADFI 79 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhcc--ccccchhhHHHHH
Confidence 5699999999999999999999999988443 567889999999999999999999998652 2223356677889
Q ss_pred hhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCC----CCCCCChhhhhhHhHhhhhh--HHhh
Q 035631 447 RTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDE----PNFTRSFYSKTKAMVTFLSY--LEIF 519 (684)
Q Consensus 447 ~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~----~~~p~~~Y~~sK~~~E~~~~--~~~~ 519 (684)
++|+.+|.+||++|++.++ ++||+||++|||+....+ ++|+.+ +..|.+.||.||+++|+++. ....
T Consensus 80 ~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~------~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 153 (315)
T d1e6ua_ 80 YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP------MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 153 (315)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS------BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCC------ccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998 699999999999777666 444432 23255689999999999854 4555
Q ss_pred hhhhhhhhhhhhhHHHH--------------HHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhH
Q 035631 520 VLVICIECLINFQVEGL--------------LKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEM 585 (684)
Q Consensus 520 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 585 (684)
+.++++.|+.+++|++. .............+.+.|++.+.|+| +|++|+
T Consensus 154 gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~-----------------~~v~d~ 216 (315)
T d1e6ua_ 154 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF-----------------LHVDDM 216 (315)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE-----------------EEHHHH
T ss_pred CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEE-----------------EEeehh
Confidence 67888888887776431 11112222333446677888888899 999999
Q ss_pred HHHHHHHHhcC----------ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-
Q 035631 586 LPIAIEMARRN----------CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL- 654 (684)
Q Consensus 586 ~~~~~~~~~~~----------~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl- 654 (684)
++++..++++. ..+.+|++++...++.++++.+.+.+|....+...+.. + .... ...+|++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~--~---~~~~-~~~~d~sk~k 290 (315)
T d1e6ua_ 217 AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK--P---DGTP-RKLLDVTRLH 290 (315)
T ss_dssp HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS--C---CCCS-BCCBCCHHHH
T ss_pred HHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCC--C---CCCc-eeccCHHHHH
Confidence 99999998654 34689999999999999999999999976554322111 0 1112 346899999
Q ss_pred hhcCCCchhHHHHHHHHHhhcccc
Q 035631 655 KKEFPEVLSIKDSIIKYVLEPNKK 678 (684)
Q Consensus 655 ~~~~~~~~~~~~~l~~~~~~~~~~ 678 (684)
+++|.+..+++++|+++++++.++
T Consensus 291 ~Lg~~p~~~l~e~i~~ti~w~~~N 314 (315)
T d1e6ua_ 291 QLGWYHEISLEAGLASTYQWFLEN 314 (315)
T ss_dssp HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHc
Confidence 778888899999999999987754
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=6.3e-32 Score=272.35 Aligned_cols=273 Identities=16% Similarity=0.188 Sum_probs=203.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------eeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------FGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVET 445 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 445 (684)
|||||||||||||++|+++|.++|+.|. .+.+|++|.+.+++++++.+||+||||||.+ ..+.+..++...
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~---~~~~~~~~~~~~ 77 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPELA 77 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccc---cccccccCcccc
Confidence 7999999999999999999999998772 3557999999999999999999999999977 567788999999
Q ss_pred hhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHHhhhhhhhh
Q 035631 446 IRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICI 525 (684)
Q Consensus 446 ~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~ 525 (684)
+++|+.++.+|+++|++.+++++++||+++|+.....| ++|++++. |.+.|+.+|..+|......... ....
T Consensus 78 ~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~------~~E~~~~~-p~~~y~~~k~~~e~~~~~~~~~-~~~~ 149 (298)
T d1n2sa_ 78 QLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP------WQETDATS-PLNVYGKTKLAGEKALQDNCPK-HLIF 149 (298)
T ss_dssp HHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC------BCTTSCCC-CSSHHHHHHHHHHHHHHHHCSS-EEEE
T ss_pred ccccccccccchhhhhccccccccccccccccCCCCCC------CccccccC-CCchHhhhhhhhhhhHHhhhcc-cccc
Confidence 99999999999999999999999999999998766666 88999988 9999999999998764332211 1111
Q ss_pred hhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccccccc-C---CCccchhhHHHHHHHHHhc----C-
Q 035631 526 ECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNI-P---NSMTVLDEMLPIAIEMARR----N- 596 (684)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~---~~~i~v~D~~~~~~~~~~~----~- 596 (684)
++.. ...+.+.....++.+.+..+..+.. . .+++|++|+++++..++.. .
T Consensus 150 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~ 208 (298)
T d1n2sa_ 150 RTSW---------------------VYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPE 208 (298)
T ss_dssp EECS---------------------EECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGG
T ss_pred cccc---------------------eeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhcccc
Confidence 1111 1222233333333333333332222 1 1669999999999888752 2
Q ss_pred ccceeEecCCCcccHHHHHHHHHhhcCCc---cc---ccCCchhHhhhhhccCCCCCcCCchhhh--hcCCCchhHHHHH
Q 035631 597 CRGAWNFTNPGVISHNEILELYKEYIDPQ---LK---WSNFNLEEQAKVLVAPRSNNHMDVTKLK--KEFPEVLSIKDSI 668 (684)
Q Consensus 597 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~---~~---~~~~~~~~~~~~~~~~~~~~~~d~~kl~--~~~~~~~~~~~~l 668 (684)
..++||+++++.++..++++.+.+..+.. .. +.+++..+.+..+.||. +.++|++|++ .+| .+++|+++|
T Consensus 209 ~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~-~~~ld~~K~~~~~~~-~~~~~~~gl 286 (298)
T d1n2sa_ 209 VAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPG-NSRLNTEKFQRNFDL-ILPQWELGV 286 (298)
T ss_dssp GCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCS-BCCBCCHHHHHHHTC-CCCBHHHHH
T ss_pred ccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCcc-ccccCHHHHHHHHCC-CCCcHHHHH
Confidence 56899999999999999999987766531 11 11223333333445666 7789999993 344 445999999
Q ss_pred HHHHhhcccc
Q 035631 669 IKYVLEPNKK 678 (684)
Q Consensus 669 ~~~~~~~~~~ 678 (684)
+++++++...
T Consensus 287 ~~~i~~~~~~ 296 (298)
T d1n2sa_ 287 KRMLTEMFTT 296 (298)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhh
Confidence 9999998753
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=1e-29 Score=255.98 Aligned_cols=282 Identities=20% Similarity=0.182 Sum_probs=218.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||||||||||||++|++.|.++ |+ ++.+++... .+.+|+.|.+.+.+++...++|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~-~v~~~~~~~-----------------~~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GN-LIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SE-EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CC-EEEEECCCc-----------------cccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 68999999999999999999988 55 455555321 02479999999999997779999999
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHH
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (684)
|||......++.++...+..|+.++.+|+++|++.+ .+++++||+.+|+..... +.+|..+..|.+.|+.+|..+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~~---~~~E~~~~~p~~~y~~~k~~~ 135 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGDI---PWQETDATSPLNVYGKTKLAG 135 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTTC---CBCTTSCCCCSSHHHHHHHHH
T ss_pred ecccccccccccCccccccccccccccchhhhhccc--cccccccccccccCCCCC---CCccccccCCCchHhhhhhhh
Confidence 999888777888999999999999999999999876 789999999998766543 347888889999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHh----cC
Q 035631 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH----RG 248 (684)
Q Consensus 173 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~----~~ 248 (684)
|..++.+ .....++|++..++... .+....+...+.....+...+ ...++++|+.|+++++..++. .+
T Consensus 136 e~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~ 207 (298)
T d1n2sa_ 136 EKALQDN----CPKHLIFRTSWVYAGKG--NNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKP 207 (298)
T ss_dssp HHHHHHH----CSSEEEEEECSEECSSS--CCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred hhhHHhh----hcccccccccceeeccC--Cccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccc
Confidence 9998765 34467777777765433 245556666677777666643 467899999999999988775 33
Q ss_pred CCCcEEEecCCCccCHHHHHHHHHHHhCC---CCCcc-eeeccCCCCC-----CcceecCHHHHHh-cCCcccCCHHHHH
Q 035631 249 VIGHVYNVGTKKERSVLDVAADICTLFKL---EPEKT-IHYVQDRPFN-----DHRYFLDDQKLKR-LGWKEKTPWEEGL 318 (684)
Q Consensus 249 ~~~~~~ni~~~~~~t~~e~~~~i~~~~g~---~~~~~-~~~~~~~~~~-----~~~~~~d~~k~~~-lg~~p~~~~~e~i 318 (684)
...++||+++++.+++.++++.+.+..+. ..... +...+...+. +....+|++|+++ +||+|+ +|+++|
T Consensus 208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl 286 (298)
T d1n2sa_ 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (298)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred cccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHH
Confidence 45789999999999999999988776532 22111 1111111111 1223689999988 999997 999999
Q ss_pred HHHHHHHHhC
Q 035631 319 KLTLEWYKKN 328 (684)
Q Consensus 319 ~~~i~~~~~~ 328 (684)
+++++++.+.
T Consensus 287 ~~~i~~~~~~ 296 (298)
T d1n2sa_ 287 KRMLTEMFTT 296 (298)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhh
Confidence 9999988764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=3.4e-31 Score=276.53 Aligned_cols=280 Identities=13% Similarity=0.115 Sum_probs=209.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHh-cCCeEe-----------------------------------------eeeccCCChh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKD-KGIAFE-----------------------------------------FGTGRLEDKN 409 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~-~g~~v~-----------------------------------------~~~~d~~d~~ 409 (684)
|||||||||||||++|+++|++ .||+|. ++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 6999999999999999999986 677763 4578999999
Q ss_pred HHHHHHHhcCC-CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCC-CCC
Q 035631 410 SLLDDMKRVRP-THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHP-QGS 486 (684)
Q Consensus 410 ~~~~~~~~~~~-d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~-~~~ 486 (684)
.++++++..++ |+|||+|+.. ........+....+.|+.++.++|++|++.+++ ++++||+++|+...... ..+
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~---~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 159 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred Hhhhhhhccceeehhhcccccc---cccccccccccccccccccccccchhhhccCCccccccccccccccccccccccc
Confidence 99999987654 9999999976 455566788899999999999999999999875 99999999998654433 334
Q ss_pred CCCCccCCCCCCCCChhhhhhHhHhhhhh--HHhhhhhhhhhhhhhhhHHHHH--------------Hhhhh--------
Q 035631 487 SIGFKEDDEPNFTRSFYSKTKAMVTFLSY--LEIFVLVICIECLINFQVEGLL--------------KAYEN-------- 542 (684)
Q Consensus 487 ~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~--~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-------- 542 (684)
..++.|+++.. |.+.|+.+|+.+|.++. ....+.++++.|+.+++|++.. +.+..
T Consensus 160 ~~~~~e~~~~~-p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~ 238 (383)
T d1gy8a_ 160 AEPIDINAKKS-PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (383)
T ss_dssp CCCBCTTSCCB-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred ccccccccCCC-CCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccc
Confidence 56688888888 99999999999999854 4455677777888777654321 11111
Q ss_pred --------hhccccccceec------CCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC----------cc
Q 035631 543 --------VCTLRLRMPISS------DLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN----------CR 598 (684)
Q Consensus 543 --------~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----------~~ 598 (684)
......++.++| +|.+.|+| +|++|+|++++.+++.. ..
T Consensus 239 ~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdf-----------------i~v~D~~~a~~~~~~~~~~~~~~~~~~~~ 301 (383)
T d1gy8a_ 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDY-----------------VHVCDLASAHILALDYVEKLGPNDKSKYF 301 (383)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECE-----------------EEHHHHHHHHHHHHHHHHTCCTTTGGGSE
T ss_pred cccchhhhhhhcCCceEEeCCccccCCCCeEEee-----------------EEHHHHHHHHHHHHhhhccccccccccCc
Confidence 111222234443 46677788 99999999999998632 34
Q ss_pred ceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhccCCCCCcCCchhh-h-hcCCCchhHHHHHHHHH-hhc
Q 035631 599 GAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKL-K-KEFPEVLSIKDSIIKYV-LEP 675 (684)
Q Consensus 599 g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl-~-~~~~~~~~~~~~l~~~~-~~~ 675 (684)
++||+++++++|+.|+++.+.+.+|.+......... ...+. ...+|++|+ + ++|.+..+++++|++.. +++
T Consensus 302 ~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~~~-----~~d~~-~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~ 375 (383)
T d1gy8a_ 302 SVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRR-----EGDPA-YLVAASDKAREVLGWKPKYDTLEAIMETSWKFQ 375 (383)
T ss_dssp EEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCC-----TTCCS-EECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHH
T ss_pred cEEEeCCCCceeHHHHHHHHHHHhCCCCceEECCCC-----CCCcC-EeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999976554332211 01123 567799999 3 57888889999999975 444
Q ss_pred ccc
Q 035631 676 NKK 678 (684)
Q Consensus 676 ~~~ 678 (684)
.++
T Consensus 376 ~~~ 378 (383)
T d1gy8a_ 376 RTH 378 (383)
T ss_dssp HTC
T ss_pred HhC
Confidence 443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=3.3e-31 Score=272.21 Aligned_cols=275 Identities=17% Similarity=0.163 Sum_probs=211.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe------------------------------eeeccCCChhHHHHHHHhcCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE------------------------------FGTGRLEDKNSLLDDMKRVRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~------------------------------~~~~d~~d~~~~~~~~~~~~~d 421 (684)
+++||||||||||+||+++|+++||+|. +..+|+++.+.+...++..++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 5899999999999999999999999872 4558999999999999999999
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC------CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN------VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~------~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+|||+|+.. .......++....+.|+.++.++++++++.. .++++.||+.+|+... .+ ++|+++
T Consensus 82 ~Vih~Aa~~---~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~------~~E~~~ 151 (339)
T d1n7ha_ 82 EVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PP------QSETTP 151 (339)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SS------BCTTSC
T ss_pred hhhhccccc---cccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CC------CCCCCC
Confidence 999999976 4555567889999999999999999998642 2477777777775433 33 789998
Q ss_pred CCCCCChhhhhhHhHhhhh--hHHhhhhhhhhhhhhhhhHHH-----HHHhhh----hhhccccccceecCCCCCchHHH
Q 035631 496 PNFTRSFYSKTKAMVTFLS--YLEIFVLVICIECLINFQVEG-----LLKAYE----NVCTLRLRMPISSDLSNPRNFVT 564 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~ 564 (684)
.. |.+.||.+|+.+|.+. +.+..+.++++.|+.+++|++ ....+. ..........+.|++.+.|+|
T Consensus 152 ~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~-- 228 (339)
T d1n7ha_ 152 FH-PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW-- 228 (339)
T ss_dssp CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC--
T ss_pred CC-CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc--
Confidence 88 9999999999999884 445556677788887776543 111121 112222334566889999999
Q ss_pred HhhhcccccccCCCccchhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCCcccccC-CchhHhhhhhccC
Q 035631 565 KLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSN-FNLEEQAKVLVAP 643 (684)
Q Consensus 565 ~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~ 643 (684)
+|++|+|+++..+++++..+.+++..+...+..++++.+.+.++....... +.... ......
T Consensus 229 ---------------~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~ 291 (339)
T d1n7ha_ 229 ---------------GFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY--FRPAEV 291 (339)
T ss_dssp ---------------EEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG--SCSSCC
T ss_pred ---------------eeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCC--CCCCCC
Confidence 999999999999999987778888888999999999999999986543321 11110 000111
Q ss_pred CCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 644 RSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 644 ~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
. ...+|++|+ .++|.+..+|+++|++++++..+
T Consensus 292 ~-~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~ 326 (339)
T d1n7ha_ 292 D-NLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 326 (339)
T ss_dssp C-BCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred C-eeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 2 456799999 45888889999999999987544
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.97 E-value=2.6e-30 Score=265.48 Aligned_cols=277 Identities=18% Similarity=0.230 Sum_probs=201.4
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
||||||||||||++|+++|+++||+| +++.+|++|.+.+.+++++++||+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 89999999999999999999999987 355799999999999999999999999999
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceee-ecCCCCCCCC----------CCCCccCCCC
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIY-EYDSMHPQGS----------SIGFKEDDEP 496 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy-~~~~~~~~~~----------~~~~~e~~~~ 496 (684)
.. .......++....++|+.||.+||++|.+.++ ++|++||++++ +.....+..+ .....+.++.
T Consensus 82 ~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 82 QV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cc---cccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 76 44555678899999999999999999999987 46666666544 4322222110 1123445555
Q ss_pred CCCCChhhhhhHhHhhhhhHHhh--hhhhhhhhhhhhhH-H-------HHHHhhhh-----hhccccccceecCCCCCch
Q 035631 497 NFTRSFYSKTKAMVTFLSYLEIF--VLVICIECLINFQV-E-------GLLKAYEN-----VCTLRLRMPISSDLSNPRN 561 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~~~~~~~-~-------~~~~~~~~-----~~~~~~~~~~~g~~~~~~~ 561 (684)
. |.+.|+.+|...|.+...... +......++..+++ . +....+.. ......++.++|+|.+.|+
T Consensus 159 ~-~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~ 237 (338)
T d1orra_ 159 D-FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237 (338)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred c-cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEe
Confidence 5 889999999999988544333 33333333332221 1 11122221 1123445778899999999
Q ss_pred HHHHhhhcccccccCCCccchhhHHHHHHHHHhcC---ccceeEecC--CCcccHHHHHHHHHhhcCCcccccCCchhHh
Q 035631 562 FVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN---CRGAWNFTN--PGVISHNEILELYKEYIDPQLKWSNFNLEEQ 636 (684)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~---~~g~~ni~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 636 (684)
| +|++|+|++++.++++. .+++||+.. +..+++.|+++.+.+.++.+..+...+...
T Consensus 238 ~-----------------~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~- 299 (338)
T d1orra_ 238 V-----------------LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRE- 299 (338)
T ss_dssp C-----------------EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCS-
T ss_pred e-----------------ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCC-
Confidence 9 99999999999999765 456899854 557899999999999998765544322210
Q ss_pred hhhhccCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhcc
Q 035631 637 AKVLVAPRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 637 ~~~~~~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~ 676 (684)
.... ...+|++|+ .++|.+..+++++|++++++.+
T Consensus 300 ----~~~~-~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k 336 (338)
T d1orra_ 300 ----SDQR-VFVADIKKITNAIDWSPKVSAKDGVQKMYDWTS 336 (338)
T ss_dssp ----SCCS-EECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred ----CCcC-eeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 1112 456799999 3688888899999999998764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.94 E-value=1.5e-26 Score=238.81 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=187.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
+||||||||||||++|+++|+++|++| +++.+|++|.+.+.++++...||+|+|+|+
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa 88 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA 88 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhc
Confidence 699999999999999999999999987 466789999999999999999999999999
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecce-eeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGC-IYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~-vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
.. ....+..++..+..+|+.++.+++++|.+.+. ++++.||++ +|....... +..|+++.. |.++|+.+
T Consensus 89 ~~---~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~~~~~~~~-p~~~y~~~ 159 (356)
T d1rkxa_ 89 QP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIW-----GYRENEAMG-GYDPYSNS 159 (356)
T ss_dssp CC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSS-----CBCTTSCBC-CSSHHHHH
T ss_pred cc---cccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccc-----ccccccccC-CCCccccc
Confidence 76 45556788899999999999999999999765 444444444 443332221 256666666 99999999
Q ss_pred hHhHhhhhhHHhhh-----------hhhhhhhhhhhhHHH------HHHhhhhhhccccccceecCCCCCchHHHHhhhc
Q 035631 507 KAMVTFLSYLEIFV-----------LVICIECLINFQVEG------LLKAYENVCTLRLRMPISSDLSNPRNFVTKLARY 569 (684)
Q Consensus 507 K~~~E~~~~~~~~~-----------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (684)
|..+|......... ..+.+.++.++++++ +...+.+... ...+.+++.+.+.++|
T Consensus 160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~------- 231 (356)
T d1rkxa_ 160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFE-QSQPVIIRNPHAIRPW------- 231 (356)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHH-TTCCEECSCTTCEECC-------
T ss_pred cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHh-CCCceEEeeccccccc-------
Confidence 99999774332221 122233333232221 1111111111 1112233444444444
Q ss_pred ccccccCCCccchhhHHHHHHHHHhcC--c----cc--eeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhhc
Q 035631 570 NKVVNIPNSMTVLDEMLPIAIEMARRN--C----RG--AWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLV 641 (684)
Q Consensus 570 ~~~~~~~~~~i~v~D~~~~~~~~~~~~--~----~g--~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 641 (684)
+|++|+|+++..++++. . .+ .++...+..+++.++++.+.+.++....+....... + .
T Consensus 232 ----------~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~ 297 (356)
T d1rkxa_ 232 ----------QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH-P---H 297 (356)
T ss_dssp ----------EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-----------
T ss_pred ----------cccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC-C---C
Confidence 99999999999988764 1 12 233344567899999999999998765543322111 1 1
Q ss_pred cCCCCCcCCchhh--hhcCCCchhHHHHHHHHHhhccc
Q 035631 642 APRSNNHMDVTKL--KKEFPEVLSIKDSIIKYVLEPNK 677 (684)
Q Consensus 642 ~~~~~~~~d~~kl--~~~~~~~~~~~~~l~~~~~~~~~ 677 (684)
..+ ...+|++|+ .++|.+..+++++|++++++++.
T Consensus 298 ~~~-~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 298 EAH-YLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp CCC-CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred CcC-eeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 123 557899999 46888889999999999876543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.5e-26 Score=233.69 Aligned_cols=270 Identities=14% Similarity=0.127 Sum_probs=178.7
Q ss_pred EEEEcCCcchhHHHHHHHHhcCC-eEeeee-------------ccCC---ChhHH-HHHHHh---cCCCeEEEcceecCC
Q 035631 374 FLIYGKTGWIGGLLGKYCKDKGI-AFEFGT-------------GRLE---DKNSL-LDDMKR---VRPTHVLNAAGITGR 432 (684)
Q Consensus 374 ilItG~~G~iG~~l~~~L~~~g~-~v~~~~-------------~d~~---d~~~~-~~~~~~---~~~d~Vih~a~~~~~ 432 (684)
|||||||||||++|+++|+++|+ +|..+. .++. +.+.+ ...... ..+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~-- 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS-- 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC--
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc--
Confidence 89999999999999999999996 564431 1122 22222 222221 1367899999854
Q ss_pred CCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhh
Q 035631 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTF 512 (684)
Q Consensus 433 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~ 512 (684)
.............|+.++.+++++++..+++++++||+.+|++..... ..|+.+.. |.+.|+.+|+.+|.
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~------~~~~~~~~-~~~~Y~~~K~~~e~ 149 (307)
T d1eq2a_ 80 ---STTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF------IESREYEK-PLNVYGYSKFLFDE 149 (307)
T ss_dssp ---CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB------CSSGGGCC-CSSHHHHHHHHHHH
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccc------cccccccc-cccccccccchhhh
Confidence 233566778889999999999999999999999999999987665544 44555555 88999999999998
Q ss_pred hh--hHHhhhhhhhhhhhhhhhHHHH---------HHhhhhhhccccccc-eecCCCCCchHHHHhhhcccccccCCCcc
Q 035631 513 LS--YLEIFVLVICIECLINFQVEGL---------LKAYENVCTLRLRMP-ISSDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 513 ~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
+. +....+.++.+.|+.++++++. ...+...+..+.... ..|++...|+| +
T Consensus 150 ~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~-----------------~ 212 (307)
T d1eq2a_ 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF-----------------V 212 (307)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCE-----------------E
T ss_pred hccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeee-----------------e
Confidence 84 4455566777778887765431 222223333333333 34777778888 9
Q ss_pred chhhHHHHHHHHHhcCccceeEecCCCcccHHHHHHHHHhhcCC-cccccCCchhHhhhhhccCCCCCcCCchhh--hhc
Q 035631 581 VLDEMLPIAIEMARRNCRGAWNFTNPGVISHNEILELYKEYIDP-QLKWSNFNLEEQAKVLVAPRSNNHMDVTKL--KKE 657 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~kl--~~~ 657 (684)
|++|+++++..++++...+.||+++++..|+.|+++.+.+..+. .....+.+.. .. .+.......|++|+ ..+
T Consensus 213 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~--~~--~~~~~~~~~d~~k~~~~~~ 288 (307)
T d1eq2a_ 213 YVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDK--LK--GRYQAFTQADLTNLRAAGY 288 (307)
T ss_dssp EHHHHHHHHHHHHHHCCCEEEEESCSCCBCHHHHHHHC-------------------------CCCSCCBCCHHHHHTTC
T ss_pred ecccHHHHHHHHhhhccccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCcc--CC--CCCceeeecCHHHHHHHHC
Confidence 99999999999999888889999999999999999999877653 2222222111 11 11111345689999 334
Q ss_pred CCCchhHHHHHHHHHhhcc
Q 035631 658 FPEVLSIKDSIIKYVLEPN 676 (684)
Q Consensus 658 ~~~~~~~~~~l~~~~~~~~ 676 (684)
|.+..+++++|+++++++.
T Consensus 289 ~~p~~sl~egi~~~i~w~~ 307 (307)
T d1eq2a_ 289 DKPFKTVAEGVTEYMAWLN 307 (307)
T ss_dssp CCCCCCHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHhCC
Confidence 5678999999999999863
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.93 E-value=1.8e-26 Score=236.33 Aligned_cols=276 Identities=11% Similarity=0.053 Sum_probs=177.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe--------------------------eeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE--------------------------FGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
.+|||||||||||++|+++|+++|++|. .+.+|+.|.+.+.+++.++ |+|+|
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~v~~ 89 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA--AGVAH 89 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccc--hhhhh
Confidence 4899999999999999999999999872 3567999999999999888 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-C-eEEEEecceeeecCCC-CC---CCCCC----------C
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-V-LLMNFATGCIYEYDSM-HP---QGSSI----------G 489 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-~~i~~SS~~vy~~~~~-~~---~~~~~----------~ 489 (684)
+|+.. . ....+..+++.|+.||.++|++|.+.+ + ++||+||+.+++...+ .. ..+.. .
T Consensus 90 ~a~~~---~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 163 (342)
T d1y1pa1 90 IASVV---S---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp CCCCC---S---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred hcccc---c---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccc
Confidence 99955 2 235566788999999999999999874 4 5999999875432221 11 11111 1
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhhhHH--hhhhhhhh--hhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLSYLE--IFVLVICI--ECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+.|+++.. |.+.|+.+|..+|++++.. ..+.++.+ .++.+++|+...+.. .....-.++..
T Consensus 164 ~~e~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~--------------~~~~~~~~~~~ 228 (342)
T d1y1pa1 164 LPESDPQK-SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET--------------QSGSTSGWMMS 228 (342)
T ss_dssp SCTTSTTH-HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT--------------CCCHHHHHHHH
T ss_pred ccccCCCC-CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc--------------cccchHHHHHH
Confidence 34555555 7888999999999885443 33333322 222222211100000 00000122223
Q ss_pred hhhccccccc----CCCccchhhHHHHHHHHHhcC-ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCchhHhhhhh
Q 035631 566 LARYNKVVNI----PNSMTVLDEMLPIAIEMARRN-CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVL 640 (684)
Q Consensus 566 ~~~~~~~~~~----~~~~i~v~D~~~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~ 640 (684)
++.+...... +.+++|++|+|++++.+++++ ..|.|++++++.+|++|+++.+.+.++.......++.. ..
T Consensus 229 l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~--~~-- 304 (342)
T d1y1pa1 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQ--GQ-- 304 (342)
T ss_dssp HHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCC--CC--
T ss_pred HHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCcc--Cc--
Confidence 3332221111 114599999999999999876 67788899999999999999999987421111111111 00
Q ss_pred ccCCCCCcCCchhh-hhcCCCchhHHHHHHHHHhh
Q 035631 641 VAPRSNNHMDVTKL-KKEFPEVLSIKDSIIKYVLE 674 (684)
Q Consensus 641 ~~~~~~~~~d~~kl-~~~~~~~~~~~~~l~~~~~~ 674 (684)
.........+.+++ .++|.+..+++++|+++++.
T Consensus 305 ~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 305 DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp CCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred ccccccchHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence 00011122234445 56777888999999999864
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.7e-25 Score=210.46 Aligned_cols=211 Identities=14% Similarity=0.013 Sum_probs=160.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
|++++|||||||||||++|+++|++++.-++|++++|++... .......++...+|+.+.+.+..++ .++|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~------~~~~~~~i~~~~~D~~~~~~~~~~~--~~~d~ 83 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF------DEEAYKNVNQEVVDFEKLDDYASAF--QGHDV 83 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC------CSGGGGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhh------cccccceeeeeeecccccccccccc--ccccc
Confidence 456899999999999999999999994335999999965211 1122356788889999988888888 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|||++|.... ..+.....++|+.++.+++++|++.+ +++|||+||..+++. +.+.|+.+|
T Consensus 84 vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~----------------~~~~Y~~~K 143 (232)
T d2bkaa1 84 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------SNFLYLQVK 143 (232)
T ss_dssp EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHHH
T ss_pred cccccccccc---ccchhhhhhhcccccceeeecccccC-ccccccCCccccccC----------------ccchhHHHH
Confidence 9999986532 23455678999999999999999988 999999999877532 235799999
Q ss_pred HHHHHHHHHHHHhcCCC-EEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 170 AGAEMLVMAYHRSYGLP-TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
..+|+.+.+ .+++ ++|+||+.+||++.. .+....+........ .........|+++|+|++++.++..+
T Consensus 144 ~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 144 GEVEAKVEE----LKFDRYSVFRPGVLLCDRQE-SRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRP 213 (232)
T ss_dssp HHHHHHHHT----TCCSEEEEEECCEEECTTGG-GSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred HHhhhcccc----ccccceEEecCceeecCCCc-CcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcC
Confidence 999988854 3665 899999999998653 234444444443322 22223345699999999999999888
Q ss_pred CCCcEEEecC
Q 035631 249 VIGHVYNVGT 258 (684)
Q Consensus 249 ~~~~~~ni~~ 258 (684)
..++.+.+.+
T Consensus 214 ~~~~~~i~~~ 223 (232)
T d2bkaa1 214 RDKQMELLEN 223 (232)
T ss_dssp CCSSEEEEEH
T ss_pred ccCCeEEEcH
Confidence 7777777764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5.3e-24 Score=200.44 Aligned_cols=202 Identities=15% Similarity=0.139 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
|.|+||+||||||+||++++++|+++ |++|++++|++.. .. .....+++++.+|+.|.+++.+++ .++|+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~--~~----~~~~~~~~~~~gD~~d~~~l~~al--~~~d~ 70 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSR--LP----SEGPRPAHVVVGDVLQAADVDKTV--AGQDA 70 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGG--SC----SSSCCCSEEEESCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhh--cc----cccccccccccccccchhhHHHHh--cCCCE
Confidence 46789999999999999999999999 8999999997532 11 123467999999999999999999 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
|||++|....... ...+..+++++++++++++ ++|||++||..+|+..... ......|...|
T Consensus 71 vi~~~g~~~~~~~-------~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~----------~~~~~~~~~~~ 132 (205)
T d1hdoa_ 71 VIVLLGTRNDLSP-------TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV----------PPRLQAVTDDH 132 (205)
T ss_dssp EEECCCCTTCCSC-------CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS----------CGGGHHHHHHH
T ss_pred EEEEeccCCchhh-------hhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccc----------cccccccchHH
Confidence 9999986543211 1356788999999999998 9999999999887643321 11234588889
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
..+|++++ +.+++|+++||+.+++.... ....+..++.....+++++|+|++++.+++++.
T Consensus 133 ~~~e~~l~----~~~~~~tiirp~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 133 IRMHKVLR----ESGLKYVAVMPPHIGDQPLT---------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp HHHHHHHH----HTCSEEEEECCSEEECCCCC---------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred HHHHHHHH----hcCCceEEEecceecCCCCc---------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 88888774 45999999999999875321 123444566667789999999999999998765
Q ss_pred -CCcEEEecC
Q 035631 250 -IGHVYNVGT 258 (684)
Q Consensus 250 -~~~~~ni~~ 258 (684)
.++.+.++.
T Consensus 194 ~~g~~~~~s~ 203 (205)
T d1hdoa_ 194 YDGHSTYPSH 203 (205)
T ss_dssp TTTCEEEEEC
T ss_pred CCCEEEecCC
Confidence 567776653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.90 E-value=6.4e-24 Score=213.82 Aligned_cols=233 Identities=16% Similarity=0.136 Sum_probs=170.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
.+|||||||||||||++++++|+++ |++|++++|+.......... ......+++++.+|+.+.......+ .++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~ 77 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV--KNV 77 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh--hhc
Confidence 4689999999999999999999999 89999999975321110000 0011346889999999999998888 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHH
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSA 167 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 167 (684)
+.|+|+++... ..++.++++++..++ ++++++.||...+.. +.....+...+..
T Consensus 78 ~~vi~~~~~~~---------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~----------~~~~~~~~~~~~~ 131 (307)
T d1qyca_ 78 DVVISTVGSLQ---------------IESQVNIIKAIKEVG-TVKRFFPSEFGNDVD----------NVHAVEPAKSVFE 131 (307)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHC-CCSEEECSCCSSCTT----------SCCCCTTHHHHHH
T ss_pred eeeeecccccc---------------cchhhHHHHHHHHhc-cccceeeeccccccc----------ccccccccccccc
Confidence 99999987543 234567888888887 788888887544321 1112222334555
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhc
Q 035631 168 TKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247 (684)
Q Consensus 168 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 247 (684)
.+...+..+ .+.+++++++||+++||+... .+..+.....++....+++++++.++|+|++|+|++++.++.+
T Consensus 132 ~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 204 (307)
T d1qyca_ 132 VKAKVRRAI----EAEGIPYTYVSSNCFAGYFLR---SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 204 (307)
T ss_dssp HHHHHHHHH----HHHTCCBEEEECCEEHHHHTT---TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred ccccccchh----hccCCCceecccceecCCCcc---chhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence 555555544 455999999999999997542 1222233344566777888999999999999999999999987
Q ss_pred CC-CCc-EEEecCCCccCHHHHHHHHHHHhCCCCC
Q 035631 248 GV-IGH-VYNVGTKKERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 248 ~~-~~~-~~ni~~~~~~t~~e~~~~i~~~~g~~~~ 280 (684)
+. .++ .|++++++.+|+.|+++.+.+.+|.+..
T Consensus 205 ~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 205 PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred hhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence 54 344 5677888999999999999999998654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.89 E-value=3.7e-24 Score=216.33 Aligned_cols=239 Identities=16% Similarity=0.106 Sum_probs=176.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC--CCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH--PSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.++||||||||||||++|+++|+++ |++|++++|+.......... ......+++++.+|+.|.+.+...+ .+++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~--~~~~ 77 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL--KQVD 77 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc--cCcc
Confidence 4678999999999999999999999 89999999975322111100 0112357899999999999999998 7899
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHH
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSAT 168 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 168 (684)
.++|+++..... .|..+..+++++|++.+ ..++++.||.++++.. +..+..|...|...
T Consensus 78 ~~~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~---------~~~~~~~~~~~~~~ 136 (312)
T d1qyda_ 78 VVISALAGGVLS-----------HHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI---------MEHALQPGSITFID 136 (312)
T ss_dssp EEEECCCCSSSS-----------TTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS---------CCCCCSSTTHHHHH
T ss_pred hhhhhhhhcccc-----------cchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC---------cccccchhhhhhHH
Confidence 999999865432 23445678888898887 6777888876554322 23344566677777
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC
Q 035631 169 KAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 169 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 248 (684)
|..++... ...+++++++||+.+||+.... +...+.......+.+.+++++++.++|+|++|+|++++.++.++
T Consensus 137 ~~~~~~~~----~~~~~~~~i~r~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~ 210 (312)
T d1qyda_ 137 KRKVRRAI----EAASIPYTYVSSNMFAGYFAGS--LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210 (312)
T ss_dssp HHHHHHHH----HHTTCCBCEEECCEEHHHHTTT--SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHHhh----cccccceEEeccceeecCCccc--hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence 77766554 5568999999999999974321 11111111234566777899999999999999999999999875
Q ss_pred C-CCc-EEEecCCCccCHHHHHHHHHHHhCCCCC
Q 035631 249 V-IGH-VYNVGTKKERSVLDVAADICTLFKLEPE 280 (684)
Q Consensus 249 ~-~~~-~~ni~~~~~~t~~e~~~~i~~~~g~~~~ 280 (684)
. .++ .|++++++.+|++|+++.+.+.+|.+.+
T Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
T d1qyda_ 211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 244 (312)
T ss_dssp GGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred cccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCe
Confidence 4 344 4677777889999999999999997653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.86 E-value=1.1e-21 Score=185.64 Aligned_cols=199 Identities=19% Similarity=0.224 Sum_probs=140.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+|||||||||||||++|+++|+++++-.+|+++.|++. ...+. +..+..|...+...+ ...+|+||
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~----------~~~~~---~~~~~~d~~~~~~~~-~~~~d~vi 67 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL----------AEHPR---LDNPVGPLAELLPQL-DGSIDTAF 67 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC----------CCCTT---EECCBSCHHHHGGGC-CSCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch----------hhccc---ccccccchhhhhhcc-ccchheee
Confidence 48999999999999999999999943348888887531 11112 344555555554443 25689999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG 171 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (684)
|++|..... ..+.....+.|+.++.+++++|++.+ +++|+++||..+++. +.+.|+.+|..
T Consensus 68 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~----------------~~~~y~~~K~~ 128 (212)
T d2a35a1 68 CCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------SSIFYNRVKGE 128 (212)
T ss_dssp ECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHHHHH
T ss_pred eeeeeeccc--cccccccccchhhhhhhccccccccc-ccccccccccccccc----------------cccchhHHHHH
Confidence 999865322 24556788999999999999999987 999999999887643 23579999999
Q ss_pred HHHHHHHHHHhcCCC-EEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcCCC
Q 035631 172 AEMLVMAYHRSYGLP-TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250 (684)
Q Consensus 172 ~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 250 (684)
+|+.+++ .+++ ++|+||+.|||+.... ++ ..++ ..++..... ..+.++|++|+|++++.+++++..
T Consensus 129 ~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~-~~-~~~~-----~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 129 LEQALQE----QGWPQLTIARPSLLFGPREEF-RL-AEIL-----AAPIARILP--GKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp HHHHHTT----SCCSEEEEEECCSEESTTSCE-EG-GGGT-----TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred Hhhhccc----cccccceeeCCcceeCCcccc-cH-HHHH-----HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCCC
Confidence 9998853 3664 9999999999987532 11 1110 111111111 224569999999999999988765
Q ss_pred CcEEEec
Q 035631 251 GHVYNVG 257 (684)
Q Consensus 251 ~~~~ni~ 257 (684)
+ ...+.
T Consensus 196 g-~~~~~ 201 (212)
T d2a35a1 196 G-VRFVE 201 (212)
T ss_dssp E-EEEEE
T ss_pred C-CEEEE
Confidence 5 43343
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.86 E-value=2.2e-22 Score=195.86 Aligned_cols=231 Identities=20% Similarity=0.197 Sum_probs=163.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.|++|||||||||||+++++.|+++++.+.|+.++|++. +...+ ..+++++.+|+.+.+.+.+++ .++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~--~~~~~-----~~~~~~~~~d~~~~~~~~~~~--~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKI-----GGEADVFIGDITDADSINPAF--QGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH--HHHHT-----TCCTTEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH--HHHhc-----cCCcEEEEeeecccccccccc--ccceee
Confidence 357999999999999999999999966678888888642 22211 347899999999999999999 789999
Q ss_pred EEcCccCCcCC-------------CCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 91 MHFAAQTHVDN-------------SFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 91 ih~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
||+|+...... ..........+|+.++++++..+.... .+++.+.|+...+..... .
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~---------~ 142 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHP---------L 142 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCG---------G
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcc---------c
Confidence 99998643211 112344567889999999999999877 789999888665532211 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
...+...|...+.+.+.. ..+.+++++++||+++||+.......+ .+..... .....+++|++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~~~--------~~~~~~~---~~~~~~~i~~~Dv 207 (252)
T d2q46a1 143 NKLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDEL---LQTDTKTVPRADV 207 (252)
T ss_dssp GGGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSSCEE--------EESTTGG---GGSSCCEEEHHHH
T ss_pred ccccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchhhhh--------hccCccc---ccCCCCeEEHHHH
Confidence 112234465555555443 455699999999999999965322110 0000001 1233578999999
Q ss_pred HHHHHHHHhcCC-CCcEEEecCCC---ccCHHHHHHHHHHHh
Q 035631 238 AEAFDVILHRGV-IGHVYNVGTKK---ERSVLDVAADICTLF 275 (684)
Q Consensus 238 a~~i~~~~~~~~-~~~~~ni~~~~---~~t~~e~~~~i~~~~ 275 (684)
|++++.+++++. .+++|||+++. ..++.++.+.+.++.
T Consensus 208 a~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 208 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred HHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 999999998765 56799998643 456777776665543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.85 E-value=2.1e-21 Score=195.84 Aligned_cols=216 Identities=15% Similarity=0.115 Sum_probs=161.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhcCCCeEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~~~d~Vi 424 (684)
++||||||||||||++|+++|+++||+| +++.+|+.|.+.+...+.+. +++|
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~--~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCc--chhh
Confidence 5699999999999999999999999976 45678899999999999988 9999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
|+++.. ....|..++.+++++|.+.+ .+++++||.+++.. .+..+.. |...|
T Consensus 81 ~~~~~~--------------~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------------~~~~~~~-~~~~~ 133 (312)
T d1qyda_ 81 SALAGG--------------VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------------IMEHALQ-PGSIT 133 (312)
T ss_dssp ECCCCS--------------SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------------SCCCCCS-STTHH
T ss_pred hhhhhc--------------ccccchhhhhHHHHHHHHhcCCcEEEEeeccccCC------------Ccccccc-hhhhh
Confidence 998743 12456777889999999876 47888887655532 1222333 66778
Q ss_pred hhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHh---hhhhhccccccceecCCCCCchHHHHhhhcccccccCCCcc
Q 035631 504 SKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKA---YENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMT 580 (684)
Q Consensus 504 ~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i 580 (684)
...|..++.. ....+.+..+.|+..++++..... .........++.++|++++.++| +
T Consensus 134 ~~~~~~~~~~--~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------------i 194 (312)
T d1qyda_ 134 FIDKRKVRRA--IEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIW-----------------V 194 (312)
T ss_dssp HHHHHHHHHH--HHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEE-----------------E
T ss_pred hHHHHHHHHh--hcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccce-----------------e
Confidence 8888777653 233455667777777766543211 11222233446677888888899 9
Q ss_pred chhhHHHHHHHHHhcC--ccc-eeEecCCCcccHHHHHHHHHhhcCCcccccCCchh
Q 035631 581 VLDEMLPIAIEMARRN--CRG-AWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLE 634 (684)
Q Consensus 581 ~v~D~~~~~~~~~~~~--~~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 634 (684)
|++|+|++++.+++++ .++ .|++++++.+|++|+++.+.+.+|.+.+...++..
T Consensus 195 ~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~ 251 (312)
T d1qyda_ 195 DEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQ 251 (312)
T ss_dssp CHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred eHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHH
Confidence 9999999999999876 345 46677777899999999999999988777766654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.81 E-value=3.9e-20 Score=185.74 Aligned_cols=213 Identities=19% Similarity=0.160 Sum_probs=153.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhcCCCe
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~~~d~ 422 (684)
+++||||||||||||++|+++|+++||+| .++.+|+.+...+...+++. +.
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~ 79 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DV 79 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhc--ee
Confidence 46799999999999999999999999987 45667888888888888887 99
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|+|+++.. ++.++.++++++...+++ +++.||...+ .++..... +..
T Consensus 80 vi~~~~~~------------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~-------------~~~~~~~~-~~~ 127 (307)
T d1qyca_ 80 VISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPSEFGND-------------VDNVHAVE-PAK 127 (307)
T ss_dssp EEECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECSCCSSC-------------TTSCCCCT-THH
T ss_pred eeeccccc------------------ccchhhHHHHHHHHhccccceeeeccccc-------------cccccccc-ccc
Confidence 99988733 344677889999998875 5555553222 11222222 334
Q ss_pred hhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHH--hhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCc
Q 035631 502 FYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLK--AYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSM 579 (684)
Q Consensus 502 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (684)
.+...+...+.. ....+.+..+.|+.++++.+... .............+++++.+.++|
T Consensus 128 ~~~~~~~~~~~~--~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 188 (307)
T d1qyca_ 128 SVFEVKAKVRRA--IEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVF----------------- 188 (307)
T ss_dssp HHHHHHHHHHHH--HHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEE-----------------
T ss_pred ccccccccccch--hhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccC-----------------
Confidence 555565555443 23456677788888877665322 111222233335667888888899
Q ss_pred cchhhHHHHHHHHHhcC--ccc-eeEecCCCcccHHHHHHHHHhhcCCcccccCCchhH
Q 035631 580 TVLDEMLPIAIEMARRN--CRG-AWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEE 635 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~--~~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 635 (684)
+|++|+|++++.+++++ .++ .||+++++.+|+.|+++.+.+.+|.+.+...++..+
T Consensus 189 i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~ 247 (307)
T d1qyca_ 189 VKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE 247 (307)
T ss_dssp ECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred CcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHH
Confidence 99999999999999876 344 577788899999999999999999887776666543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.81 E-value=1e-19 Score=186.33 Aligned_cols=231 Identities=19% Similarity=0.135 Sum_probs=164.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH-HHHHHhhccCCCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA-DLMNYLLVSEGIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d~ 89 (684)
.+|+|||||||||||++|+++|+++ |++|+++.|+.+......+ ...++++++.+|+.|. +.+..++ .++|.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~---~~~~~v~~~~gD~~d~~~~~~~a~--~~~~~ 74 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEEL---QAIPNVTLFQGPLLNNVPLMDTLF--EGAHL 74 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHH---HTSTTEEEEESCCTTCHHHHHHHH--TTCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhh---cccCCCEEEEeeCCCcHHHHHHHh--cCCce
Confidence 4689999999999999999999999 8999999997643333222 2235899999999885 4566777 78888
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHH
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 169 (684)
+++...... ..++..+++++++|++++ ++++++.||....... ...+...|..+|
T Consensus 75 ~~~~~~~~~------------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~------------~~~~~~~~~~~k 129 (350)
T d1xgka_ 75 AFINTTSQA------------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLY------------GPWPAVPMWAPK 129 (350)
T ss_dssp EEECCCSTT------------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGT------------SSCCCCTTTHHH
T ss_pred EEeeccccc------------chhhhhhhHHHHHHHHhC-CCceEEEeeccccccC------------CcccchhhhhhH
Confidence 887654321 124667889999999998 7788888876543221 223345677888
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC-CceEEecCCCceEecccH-HHHHHHHHHHHhc
Q 035631 170 AGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKG-QQLPIHGNGSNVRSYLYC-ADVAEAFDVILHR 247 (684)
Q Consensus 170 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~-~D~a~~i~~~~~~ 247 (684)
...|..+. +.+++++++|++..++........... ......+ .....+.+++..++++++ +|+++++..++..
T Consensus 130 ~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~ 204 (350)
T d1xgka_ 130 FTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD 204 (350)
T ss_dssp HHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----hhccCceeeeeceeecccccccccccc-ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhC
Confidence 88877664 458899999999988753211100000 0001111 123444567777888876 7999999999865
Q ss_pred C---CCCcEEEecCCCccCHHHHHHHHHHHhCCCC
Q 035631 248 G---VIGHVYNVGTKKERSVLDVAADICTLFKLEP 279 (684)
Q Consensus 248 ~---~~~~~~ni~~~~~~t~~e~~~~i~~~~g~~~ 279 (684)
. ..++.|++++ +.+|+.|+++.+.+.+|.+.
T Consensus 205 ~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 205 GPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp CHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred ChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcc
Confidence 3 2578999986 67999999999999999864
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.2e-20 Score=180.91 Aligned_cols=188 Identities=11% Similarity=0.003 Sum_probs=128.6
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC--eE------------------eeeeccCCChhHHHHHHHhcCCCeEEEccee
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI--AF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~--~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
++++|||||||||||++|+++|+++|. +| ....+|+.+.+.+...++++ |+|||+++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~--d~vi~~~~~ 90 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGH--DVGFCCLGT 90 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSC--SEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccc--ccccccccc
Confidence 346899999999999999999999995 44 44556777888888888887 999999984
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
. ........+.++|+.++.+++++|.+.+++ ||++||..+++ .+.+.|+++|.
T Consensus 91 ~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~--------------------~~~~~Y~~~K~ 144 (232)
T d2bkaa1 91 T------RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------------SSNFLYLQVKG 144 (232)
T ss_dssp C------HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHH
T ss_pred c------ccccchhhhhhhcccccceeeecccccCccccccCCcccccc--------------------CccchhHHHHH
Confidence 3 234556788999999999999999999985 99999986653 14468999999
Q ss_pred hHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHH-HhhhcccccccCCCccchhhHHH
Q 035631 509 MVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVT-KLARYNKVVNIPNSMTVLDEMLP 587 (684)
Q Consensus 509 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~~~ 587 (684)
.+|+....... ..+++.|+..+++.+...... .++. ..+..-+.......+||++|+|+
T Consensus 145 ~~E~~l~~~~~-~~~~IlRP~~i~G~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~I~~~dvA~ 204 (232)
T d2bkaa1 145 EVEAKVEELKF-DRYSVFRPGVLLCDRQESRPG-------------------EWLVRKFFGSLPDSWASGHSVPVVTVVR 204 (232)
T ss_dssp HHHHHHHTTCC-SEEEEEECCEEECTTGGGSHH-------------------HHHHHHHHCSCCTTGGGGTEEEHHHHHH
T ss_pred Hhhhccccccc-cceEEecCceeecCCCcCcHH-------------------HHHHHHHhhccCCcccCCCeEEHHHHHH
Confidence 99876433211 134556666444332111100 0000 00000000011124599999999
Q ss_pred HHHHHHhcC-ccceeEecC
Q 035631 588 IAIEMARRN-CRGAWNFTN 605 (684)
Q Consensus 588 ~~~~~~~~~-~~g~~ni~~ 605 (684)
++++++.++ ..+.+.+.+
T Consensus 205 a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 205 AMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp HHHHHHTSCCCSSEEEEEH
T ss_pred HHHHHHhcCccCCeEEEcH
Confidence 999998877 555666643
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.5e-19 Score=167.05 Aligned_cols=180 Identities=10% Similarity=0.024 Sum_probs=126.7
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
.|+||+||||||+||++++++|+++||+| +++.+|++|.+++.++++++ |+|||++|...
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~--d~vi~~~g~~~ 79 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTRN 79 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCC--CEEEEEeccCC
Confidence 45699999999999999999999999987 78889999999999999998 99999998441
Q ss_pred CCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhH
Q 035631 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMV 510 (684)
Q Consensus 432 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~ 510 (684)
+......+..++.+++++++++++ |+|++||+.+|+.....+ . ....|...|..+
T Consensus 80 ----------~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-------------~-~~~~~~~~~~~~ 135 (205)
T d1hdoa_ 80 ----------DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------------P-RLQAVTDDHIRM 135 (205)
T ss_dssp ----------CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------------G-GGHHHHHHHHHH
T ss_pred ----------chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-------------c-cccccchHHHHH
Confidence 112234567789999999999998 599999998875332221 1 335688888888
Q ss_pred hhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHH
Q 035631 511 TFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAI 590 (684)
Q Consensus 511 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~ 590 (684)
|++... .+.+.++.|+..+... ...-...+..++.....| |+++|+|++++
T Consensus 136 e~~l~~--~~~~~tiirp~~~~~~----------~~~~~~~~~~~~~~~~~~-----------------i~~~DvA~~~~ 186 (205)
T d1hdoa_ 136 HKVLRE--SGLKYVAVMPPHIGDQ----------PLTGAYTVTLDGRGPSRV-----------------ISKHDLGHFML 186 (205)
T ss_dssp HHHHHH--TCSEEEEECCSEEECC----------CCCSCCEEESSSCSSCSE-----------------EEHHHHHHHHH
T ss_pred HHHHHh--cCCceEEEecceecCC----------CCcccEEEeeCCCCCCCc-----------------CCHHHHHHHHH
Confidence 765432 3344444554422100 000012223334344455 99999999999
Q ss_pred HHHhcC--ccceeEec
Q 035631 591 EMARRN--CRGAWNFT 604 (684)
Q Consensus 591 ~~~~~~--~~g~~ni~ 604 (684)
.+++++ .+..+.++
T Consensus 187 ~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 187 RCLTTDEYDGHSTYPS 202 (205)
T ss_dssp HTTSCSTTTTCEEEEE
T ss_pred HHhCCCCCCCEEEecC
Confidence 999877 34455553
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.74 E-value=5.5e-19 Score=166.85 Aligned_cols=185 Identities=10% Similarity=-0.035 Sum_probs=120.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe--Eee-----------eeccCCChhHHHHHHHhcCCCeEEEcceecCCCCcccc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA--FEF-----------GTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWC 438 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~--v~~-----------~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 438 (684)
+||||||||||||++|+++|+++|+. |.. +..+..|..++...+. ..+|+||||+|.. ...
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~-~~~d~vi~~~g~~-----~~~ 76 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLD-GSIDTAFCCLGTT-----IKE 76 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCC-SCCSEEEECCCCC-----HHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhccc-cchheeeeeeeee-----ccc
Confidence 59999999999999999999999984 421 1222333333322221 1369999999844 223
Q ss_pred ccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhhhHH
Q 035631 439 ESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLE 517 (684)
Q Consensus 439 ~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~~~~ 517 (684)
......+.+.|+.++.+++++|++.+++ ++++||.++++ .+.+.|+.+|..+|+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~--------------------~~~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHHHHTTS
T ss_pred cccccccccchhhhhhhccccccccccccccccccccccc--------------------ccccchhHHHHHHhhhcccc
Confidence 4556789999999999999999999885 99999987663 14578999999998754321
Q ss_pred hhhh-hhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCCCccchhhHHHHHHHHHhcC
Q 035631 518 IFVL-VICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRN 596 (684)
Q Consensus 518 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~ 596 (684)
.. .+.+.|+.++++..........+... +..... . .| .+||++|+|++++.+++++
T Consensus 137 --~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~--~~~~~~--~--~~---------------~~i~v~DvA~ai~~~~~~~ 193 (212)
T d2a35a1 137 --GWPQLTIARPSLLFGPREEFRLAEILAAP--IARILP--G--KY---------------HGIEACDLARALWRLALEE 193 (212)
T ss_dssp --CCSEEEEEECCSEESTTSCEEGGGGTTCC--CC------C--HH---------------HHHHHHHHHHHHHHHHTCC
T ss_pred --ccccceeeCCcceeCCcccccHHHHHHHH--HhhccC--C--CC---------------cEEEHHHHHHHHHHHHcCC
Confidence 22 35566666555432211111111000 000000 1 11 3499999999999999988
Q ss_pred ccceeEecC
Q 035631 597 CRGAWNFTN 605 (684)
Q Consensus 597 ~~g~~ni~~ 605 (684)
..|.+.+.+
T Consensus 194 ~~g~~~~~~ 202 (212)
T d2a35a1 194 GKGVRFVES 202 (212)
T ss_dssp CSEEEEEEH
T ss_pred CCCCEEEEH
Confidence 777666543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=5.2e-18 Score=164.41 Aligned_cols=212 Identities=11% Similarity=0.071 Sum_probs=135.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhcCCCeEEEcceecC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
|+||||||||||||++++++|+++|++| +++.+|+++.+.+.++++++ |+|||+|+...
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~vi~~a~~~~ 80 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAVP 80 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccc--eeeEEEEeecc
Confidence 4599999999999999999999999864 56778999999999999988 99999998652
Q ss_pred CCC----------ccccccchhhHhhhchhhhHHHHHHHHHcCCe-EEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 432 RPN----------VDWCESHRVETIRTNVMGTLTLADVCKEKNVL-LMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 432 ~~~----------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
.+. .............+|+.++.+++..+...... ..+.|+..++...... ... +.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~------------~~~-~~ 147 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL------------NKL-GN 147 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG------------GGG-GG
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc------------ccc-cc
Confidence 100 11223445677889999999999999988764 7777765444211100 000 22
Q ss_pred ChhhhhhHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhccc-ccccCCCc
Q 035631 501 SFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNK-VVNIPNSM 579 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 579 (684)
..|...+.+.+. +....+.++.+.|+..+++.. ...... ...... ......++
T Consensus 148 ~~~~~~~~~~~~--~~~~~~~~~~ilRp~~v~g~~---------------------~~~~~~---~~~~~~~~~~~~~~~ 201 (252)
T d2q46a1 148 GNILVWKRKAEQ--YLADSGTPYTIIRAGGLLDKE---------------------GGVREL---LVGKDDELLQTDTKT 201 (252)
T ss_dssp CCHHHHHHHHHH--HHHHSSSCEEEEEECEEECSC---------------------TTSSCE---EEESTTGGGGSSCCE
T ss_pred cchhhhhhhhhh--hhhcccccceeecceEEECCC---------------------cchhhh---hhccCcccccCCCCe
Confidence 233444433322 223344555666655443321 111000 000000 01111245
Q ss_pred cchhhHHHHHHHHHhcC--ccceeEecCCC---cccHHHHHHHHHhhcC
Q 035631 580 TVLDEMLPIAIEMARRN--CRGAWNFTNPG---VISHNEILELYKEYID 623 (684)
Q Consensus 580 i~v~D~~~~~~~~~~~~--~~g~~ni~~~~---~~s~~e~~~~i~~~~g 623 (684)
||++|+|++++.+++++ .+++||++++. ..++.++.+.+.+..+
T Consensus 202 i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 202 VPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 99999999999999876 34599998643 4677888887776654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=3.1e-16 Score=149.06 Aligned_cols=212 Identities=15% Similarity=0.118 Sum_probs=151.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+.++|+||||||++.||+++++.|+++ |++|++.+|+.. ..+++..+++|+.|.+++.+++..
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSG-----------APKGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSC-----------CCTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc-----------hhcCceEEEEecCCHHHHHHHHHHHHHh
Confidence 357799999999999999999999999 899999999642 124677899999999987766532
Q ss_pred -CCCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||.... ..+.++++..+++|+.++..+.+++ ++.+ -.++|++||...+...
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---------- 139 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI---------- 139 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC--------------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCC----------
Confidence 379999999997543 2233456678899999988777654 3444 5799999997654211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+..+... .+.........+..++ .-+.
T Consensus 140 ----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~pl---------~R~~ 204 (237)
T d1uzma1 140 ----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR--ALDERIQQGALQFIPA---------KRVG 204 (237)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HSCHHHHHHHGGGCTT---------CSCB
T ss_pred ----cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh--ccCHHHHHHHHhcCCC---------CCCc
Confidence 12347999999999999888766 4789999999998654210 0111222222222211 1346
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..+|+|+++..++... ..|+++.+.+|
T Consensus 205 ~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 205 TPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 7899999999998543 36788888766
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=5.1e-16 Score=148.17 Aligned_cols=219 Identities=20% Similarity=0.153 Sum_probs=157.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|++|||||++.||+++++.|+++ |++|++.+|+.. .++.+.. .-+.+.+.+|+.|.+++.+++..
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEG--PLREAAE---AVGAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH---TTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH---HcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 899999999742 2222211 23578899999999998776543
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|++||+||..... ...+++...+++|+.++..+.+++... ....+++++||....+.
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~------------- 142 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------- 142 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-------------
Confidence 2799999999976432 333456678899999999888877532 22466777777543321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.++ ++++..+.||.+-.+... ..............|+. -+...
T Consensus 143 --~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~pl~---------R~~~p 209 (242)
T d1ulsa_ 143 --LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA--KVPEKVREKAIAATPLG---------RAGKP 209 (242)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--SSCHHHHHHHHHTCTTC---------SCBCH
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh--cCCHHHHHHHHhcCCCC---------CCCCH
Confidence 123579999999999998887664 799999999999766431 22233444444433322 24567
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+|+|+++..++... ..|+.+.+-+|..
T Consensus 210 edia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 99999999998542 3678888877643
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.65 E-value=7.1e-16 Score=148.13 Aligned_cols=221 Identities=13% Similarity=0.102 Sum_probs=157.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+..+|.+|||||++.||+++++.|+++ |++|++.+|+.. .+..+.. .....++..+.+|+.|.+++.+++..
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~--~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQK--SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHH--HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999 899999999642 2211111 11234688999999999988776643
Q ss_pred ---CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+|+...... ..+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~-------- 153 (251)
T d2c07a1 83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN-------- 153 (251)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC--------
T ss_pred HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCC--------
Confidence 38999999999765432 223566788999999988887653 333 5799999997654221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... .......+......|+. -
T Consensus 154 ------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~--~~~~~~~~~~~~~~pl~---------R 216 (251)
T d2c07a1 154 ------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD--KISEQIKKNIISNIPAG---------R 216 (251)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCTTS---------S
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc--ccCHHHHHHHHhcCCCC---------C
Confidence 12347999999999999888766 4899999999999776431 22334444444443321 2
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|+++..++... ..|+++.+.+|
T Consensus 217 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 217 MGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 467899999999998543 36788888765
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.2e-15 Score=145.94 Aligned_cols=221 Identities=16% Similarity=0.110 Sum_probs=157.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 88 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+. ..+..+.. ...++..+.+|+.|.+++++++.+. ++|
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~--~~l~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~g~iD 78 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQ--ADLDSLVR--ECPGIEPVCVDLGDWEATERALGSVGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHH--HSTTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCH--HHHHHHHH--hcCCCeEEEEeCCCHHHHHHHHHHhCCce
Confidence 36799999999999999999999999 89999999974 22222211 1246788999999999999888654 799
Q ss_pred EEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++||+||..... .+.+++...+++|+.++..+.+++.. .+...++|++||...+... .
T Consensus 79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--------------~ 144 (244)
T d1pr9a_ 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--------------T 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------T
T ss_pred EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc--------------c
Confidence 999999976532 23345667889999988887776532 2235799999997654221 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.++.+ +++++..+.||.+..+......--....+...+..|+ .-+...+|+
T Consensus 145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peev 215 (244)
T d1pr9a_ 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHV 215 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHH
T ss_pred chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHH
Confidence 2346999999999999888766 4789999999998765210000011223333333222 135678999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCC
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|+++..++... ..|+.+.+-+|
T Consensus 216 A~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 216 VNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhCchhCCcCCcEEEECcc
Confidence 99999988543 36778888765
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.64 E-value=1.4e-15 Score=145.60 Aligned_cols=222 Identities=14% Similarity=0.098 Sum_probs=151.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|.+|||||++.||+++++.|+++ |++|++.+|+........+. ....++..+.+|+.|.+++..++..
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~--~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIR--NLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHH--HcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 89999999975322111111 2235788999999999988776532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||......
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~------------ 145 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK------------ 145 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC------------
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhccc------------
Confidence 3799999999976532 3335667788999999998888764 333 479999999765421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+.... ............. .....-+..
T Consensus 146 --~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~--------~~~l~r~~~ 214 (247)
T d2ew8a1 146 --IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA-SALSAMFDVLPNM--------LQAIPRLQV 214 (247)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CT--------TSSSCSCCC
T ss_pred --CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc-cccchhHHHHHHH--------hccCCCCCC
Confidence 122357999999999998888765 47999999999987653211 0111111111100 001112456
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.+|+|++++.++... ..|+++.+.+|
T Consensus 215 pedvA~~v~fL~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 215 PLDLTGAAAFLASDDASFITGQTLAVDGG 243 (247)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 799999999998542 36788888766
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.64 E-value=8.5e-16 Score=146.58 Aligned_cols=221 Identities=18% Similarity=0.113 Sum_probs=156.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccC-CCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSE-GID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 88 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+.. .+..+.. ...++..+.+|+.|.+++++++++. ++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNS--DLVSLAK--ECPGIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH--HSTTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH--hcCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 46799999999999999999999999 899999999742 2222211 1246888999999999999988655 699
Q ss_pred EEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++||+||..... .+.+++...+++|+.++..+.+++.. .+...++|++||...+... .
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------------~ 142 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------------P 142 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------T
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC--------------C
Confidence 999999975432 23345667889999999888876532 2324799999997654221 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.++.+ +++++..+.||.+-.+......--+.......+..|+ .-+...+|+
T Consensus 143 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peev 213 (242)
T d1cyda_ 143 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDV 213 (242)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence 2346999999999999888776 4789999999988654110000001223333322221 134678999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCC
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|+++..++... ..|+++.+-+|
T Consensus 214 a~~v~fL~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 214 VNSILFLLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp HHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred HHHHHHHhCchhcCcCCceEEeCcc
Confidence 99999998542 36788888766
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=5e-16 Score=148.34 Aligned_cols=219 Identities=15% Similarity=0.085 Sum_probs=156.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+|+++||||++.||+++++.|+++ |++|++.+|+.. .++.+... ...+...+.+|+.|.+++.+++.. .
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~--~l~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSEN--GAQAISDY-LGANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHH-hCCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 5789999999999999999999999 899999999742 22222111 123577889999999887766532 3
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~------------ 144 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGN------------ 144 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC------------
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCC------------
Confidence 799999999976543 2334566788999999998888774 333 4799999997664221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ..+.+.......+..|+ .-+...
T Consensus 145 --~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~--~~~~~~~~~~~~~~~pl---------~R~~~p 211 (243)
T d1q7ba_ 145 --GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT--RALSDDQRAGILAQVPA---------GRLGGA 211 (243)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HTSCHHHHHHHHTTCTT---------SSCBCH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh--hhhhhhHHHHHHhcCCC---------CCCCCH
Confidence 12357999999999999888766 489999999998854421 01122223333333221 134678
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 235 ADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 235 ~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+|+|+++..++... ..|+.+.+.+|-
T Consensus 212 edvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 212 QEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 99999999998643 367889887764
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=6.7e-16 Score=148.58 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=157.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+.. ....+.. .....++.++++|+.+.+++.+++..
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~ 84 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINAD--AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999 899999999642 2211111 01234688899999999887766532
Q ss_pred --CCCCEEEEcCccCCcC---CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD---NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+...
T Consensus 85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~---------- 153 (255)
T d1fmca_ 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN---------- 153 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC----------
T ss_pred HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccc----------
Confidence 3799999999976432 2334566788999999888887663 333 4689999997654221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... ...-+.......+..|+. -+.
T Consensus 154 ----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~-~~~~~e~~~~~~~~~pl~---------R~g 219 (255)
T d1fmca_ 154 ----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK-SVITPEIEQKMLQHTPIR---------RLG 219 (255)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-TTCCHHHHHHHHHTCSSC---------SCB
T ss_pred ----cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh-ccCCHHHHHHHHhcCCCC---------CCc
Confidence 22357999999999999888766 4789999999998654210 111133334444333222 245
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
..+|+|++++.++... ..|+++.+.+|..
T Consensus 220 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 220 QPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence 6799999999998543 3678899987753
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.62 E-value=7.9e-16 Score=157.00 Aligned_cols=210 Identities=10% Similarity=0.011 Sum_probs=134.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChh-HHHHHHHhcCCCeEEEcc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKN-SLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~-~~~~~~~~~~~d~Vih~a 427 (684)
.+++|+|||||||||++|+++|+++||+| +++.+|+.|.. .++.++.+. |.+++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~--~~~~~~~ 79 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINT 79 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCC--ceEEeec
Confidence 35699999999999999999999999976 56778888754 466677776 7766654
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhh
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKT 506 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~s 506 (684)
... ...|+..+.+++++|.+.++ +++++||...... .... +...|..+
T Consensus 80 ~~~---------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------------~~~~-~~~~~~~~ 128 (350)
T d1xgka_ 80 TSQ---------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------------YGPW-PAVPMWAP 128 (350)
T ss_dssp CST---------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------------TSSC-CCCTTTHH
T ss_pred ccc---------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc---------------CCcc-cchhhhhh
Confidence 311 22356678899999999986 6888888643321 1111 44567788
Q ss_pred hHhHhhhhhHHhhhhhhhhhhhhhhhHHHHHHhhhhh-----hccccccceecCCCCCchHHHHhhhcccccccCCCccc
Q 035631 507 KAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENV-----CTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTV 581 (684)
Q Consensus 507 K~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~ 581 (684)
|...|..... ......+.++..++........... ..........++++....| ++
T Consensus 129 k~~~~~~~~~--~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------i~ 189 (350)
T d1xgka_ 129 KFTVENYVRQ--LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPW-----------------LD 189 (350)
T ss_dssp HHHHHHHHHT--SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEE-----------------EC
T ss_pred HHHHHHHHHh--hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceE-----------------EE
Confidence 8877654322 2233444444433211000000000 0000111222333444455 76
Q ss_pred h-hhHHHHHHHHHhcC----ccceeEecCCCcccHHHHHHHHHhhcCCcccccCCc
Q 035631 582 L-DEMLPIAIEMARRN----CRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFN 632 (684)
Q Consensus 582 v-~D~~~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 632 (684)
+ +|+++++..+++.. .+..|++++ +.+|+.|+++.+.+.+|++.++.+++
T Consensus 190 ~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp 244 (350)
T d1xgka_ 190 AEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 244 (350)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred eHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECC
Confidence 5 89999999998654 244888876 67999999999999999887766554
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.61 E-value=2.6e-15 Score=143.59 Aligned_cols=220 Identities=13% Similarity=0.059 Sum_probs=152.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++-||+++++.|+++ |++|++.+|+...... . ...+..++++|+.|.+++.+++..
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~--~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEV--A----EAIGGAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHH--H----HHHTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHH--H----HHcCCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999 8999999997532111 1 112457889999999887766532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ...+++...+++|+.++.++.+++. +.+ -.++|++||...+-..
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~----------- 142 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE----------- 142 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC-----------
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccc-----------
Confidence 3799999999976432 2233456788999999998888774 333 4799999997764321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... .........+......+ ..
T Consensus 143 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------l~ 210 (248)
T d2d1ya1 143 ---QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA---------LR 210 (248)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST---------TS
T ss_pred ---cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC---------CC
Confidence 22357999999999998888766 4899999999988543100 00000011111111111 11
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
-+...+|+|+++..++... ..|+.+.+-+|-.
T Consensus 211 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t 245 (248)
T d2d1ya1 211 RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT 245 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence 3467899999999998542 3678899977644
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.61 E-value=1.6e-15 Score=145.45 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=155.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|++|||||++.||+++++.|+++ |++|++.+|+...... ..+. .....++..+.+|+.|.+++.++++.
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH-HHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999 8999999997421110 0111 11234678899999999987776643
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++.. .+ -.++|++||......
T Consensus 80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~---------- 148 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV---------- 148 (251)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccc----------
Confidence 3799999999975432 23345667889999999888877643 33 569999998543211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCceEEecCCCceE
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLI--PKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
+......|+.+|...+.+.+.++.+ +++++..+.||.+-.+... ... +.......+..|+.
T Consensus 149 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~pl~--------- 214 (251)
T d1vl8a_ 149 ---TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE--AVFSDPEKLDYMLKRIPLG--------- 214 (251)
T ss_dssp ---CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH--HHHTCHHHHHHHHHTCTTS---------
T ss_pred ---cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH--hccCCHHHHHHHHhcCCCC---------
Confidence 1112347999999999999888766 4899999999998765321 111 12233333333222
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
-+...+|+|++++.++... ..|+++.+-+|-
T Consensus 215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 2345799999999988543 367888887663
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.61 E-value=3e-15 Score=142.49 Aligned_cols=215 Identities=16% Similarity=0.144 Sum_probs=154.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+.. ..+.+... ......++++|+.|.+++.++++.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDE--EGKAMAAE-LADAARYVHLDVTQPAQWKAAVDTAVTAF 78 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999 899999999742 22222111 134678899999999987766532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
..+|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+...
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~----------- 146 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT----------- 146 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccc-----------
Confidence 3799999999976542 2334566788999999988887653 333 5799999997664221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|+..+.+.+.++.+ +++++..+.||.+-.+... .. + ......+ ..-+..
T Consensus 147 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~--~~-~------~~~~~~p-------l~R~~~ 207 (244)
T d1nffa_ 147 ---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WV-P------EDIFQTA-------LGRAAE 207 (244)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TS-C------TTCSCCS-------SSSCBC
T ss_pred ---ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh--hh-h------HHHHhcc-------ccCCCC
Confidence 12347999999999999888766 4799999999988765321 00 0 0000111 123578
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.+|+|++++.++... ..|+.+.+-+|-
T Consensus 208 p~diA~~v~fL~s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 208 PVEVSNLVVYLASDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence 899999999998542 367888887664
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.61 E-value=4.9e-15 Score=141.98 Aligned_cols=220 Identities=16% Similarity=0.106 Sum_probs=153.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++-||+++++.|+++ |++|++.+|+.. ....+.. .....+.++++|+.+.+++.+++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDE--EGAATAR-ELGDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-TTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-HhCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999 899999999742 2222111 1234678999999999988777643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~------------ 144 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG------------ 144 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------------
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccc------------
Confidence 3799999999976532 2334456788999999998888773 333 589999999765422
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEec-CCCceEecc
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHG-NGSNVRSYL 232 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i 232 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+..+ . .........-.... .+.. |--.
T Consensus 145 --~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~------~----~~~~~~~~~~~~~~~~pl~-R~g~ 211 (254)
T d1hdca_ 145 --LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP------M----TAETGIRQGEGNYPNTPMG-RVGN 211 (254)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH------H----HHHHTCCCSTTSCTTSTTS-SCB-
T ss_pred --ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc------c----chhcCHHHHHHHHhCCCCC-CCCC
Confidence 122357999999999999888766 4799999999988543 1 11111000000000 0001 1113
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+|+|.+++.++... ..|+++.+-+|-
T Consensus 212 ~PedvA~~v~fL~S~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCceEEeCCCc
Confidence 4799999999998543 367899997763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=2.4e-15 Score=144.99 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=141.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|++|||||++-||+++++.|+++ |++|++.+|+.. .+..... .....++..+.+|+.+.+++..+++.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEY--ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999 899999999742 2211110 01234688999999999887766532
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||....-.
T Consensus 83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~---------- 151 (259)
T d1xq1a_ 83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS---------- 151 (259)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------------
T ss_pred hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccc----------
Confidence 2589999999976432 2334566788999999988887764 333 579999999665321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+... ...-....+......|+ .-+
T Consensus 152 ----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~-~~~~~~~~~~~~~~~pl---------~R~ 217 (259)
T d1xq1a_ 152 ----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE-AVYDDEFKKVVISRKPL---------GRF 217 (259)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------
T ss_pred ----ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh-hhchHHHHHHHHhCCCC---------CCC
Confidence 122457999999999999888766 4899999999998655321 00111111111111111 124
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+|+|.+++.++... ..|+.+.+-+|-
T Consensus 218 ~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 218 GEPEEVSSLVAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred cCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence 56799999999988532 357788887663
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.60 E-value=2.3e-15 Score=145.22 Aligned_cols=226 Identities=13% Similarity=0.069 Sum_probs=155.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|++|||||++.||+++++.|+++ |++|++.+|+... ..+.+.. ......+..+++|+.|.+++.++++.
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKED-EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 8999999997421 1111110 01234578899999999988776642
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+.-.++|++||...+-.
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~---------- 151 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP---------- 151 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc----------
Confidence 3799999999976532 2334566788999999888876653 3343356889999765321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+..+.......-+.......+..|+. -+
T Consensus 152 ----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~ 218 (261)
T d1geea_ 152 ----WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YI 218 (261)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SC
T ss_pred ----CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CC
Confidence 112357999999999998888766 48999999999986553200000012222233222211 24
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
...+|+|++++.++... ..|+.+.+-+|..
T Consensus 219 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 219 GEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence 56899999999998542 3678999987753
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.60 E-value=2.6e-15 Score=144.69 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=156.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+.. .++.+.. ....++..+.+|+.|.+++.++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~-~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLE--AARATAA-EIGPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHH--HHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-HhCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999 899999999742 2222111 1135688899999999998877643
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+.-.++|++||...+-.
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------------ 145 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG------------ 145 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------------
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc------------
Confidence 3899999999976432 2334566788999999988887643 2222479999999765421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-----------HHHHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKF-----------ILLAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 222 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ....... .+.+....|+
T Consensus 146 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--- 218 (256)
T d1k2wa_ 146 --EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW--DGVDAKFADYENLPRGEKKRQVGAAVPF--- 218 (256)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH--HHHHHHHHHHHTCCTTHHHHHHHHHSTT---
T ss_pred --cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh--hhhhhhhhhhccCChHHHHHHHHhcCCC---
Confidence 122357999999999999888766 489999999998866531 0111111 1111111111
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.-+...+|+|.+++.++... ..|+.+.+-+|..+|
T Consensus 219 ------gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 219 ------GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp ------SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred ------CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 12466899999999988542 367899998886654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.59 E-value=4.3e-15 Score=143.33 Aligned_cols=223 Identities=10% Similarity=0.026 Sum_probs=154.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC--CCCCCceEEEecCCCHHHHHHhhc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS--RASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
..+|++|||||++-||+++++.|+++ |++|++.+|+.. .+...... ....++..+.+|+.|.+++.+++.
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQK--ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 81 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999 899999999642 22211110 123467788999999988776543
Q ss_pred c-C-CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 84 S-E-GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 84 ~-~-~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
. . .+|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||......
T Consensus 82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~--------- 151 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA--------- 151 (259)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC---------
T ss_pred HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccc---------
Confidence 2 2 589999999975432 2334566788999999988887664 333 579999999765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCC---CCCChHHHHHHHHHcCCceEEecCCCc
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
......|+.+|...+.+.+.++.+. ++++..+.||.+-.+.. .................|+.
T Consensus 152 -----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~------- 219 (259)
T d2ae2a_ 152 -----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR------- 219 (259)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC-------
T ss_pred -----cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC-------
Confidence 1223579999999999999888764 78999999998865421 00011122233333333221
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
-+...+|+|++++.++... ..|+.+.+-+|-
T Consensus 220 --R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 220 --RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 2456899999999988643 367888887663
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.59 E-value=6.7e-15 Score=142.13 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=153.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|++|||||++.||+++++.|+++ |++|++.+|+.. .+..+.. .....++..+.+|+.|.+++.++++.
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNRE--ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999 899999999742 2211111 11234678899999999887766543
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..+|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+...
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~--------- 149 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP--------- 149 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC---------
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCC---------
Confidence 379999999996532 22334566788999999988887764 223 5799999997764321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCC--------------CCCChHHHHHHHHHcCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQ--------------FPEKLIPKFILLAMKGQ 217 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~--------------~~~~~~~~~~~~~~~~~ 217 (684)
.....|+.+|...+.+.+.++.+. ++++..+.||.|-.+.. ........+.+.+....
T Consensus 150 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 150 -----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred -----cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 122479999999999998887664 78999999999865410 00111222233333332
Q ss_pred ceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 218 QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 218 ~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|+. -+...+|+|.+++.++... ..|+.+.+-+|
T Consensus 225 Pl~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 225 PMR---------RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TTS---------SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCC---------CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 221 2355789999999998642 35677777643
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.58 E-value=6.7e-15 Score=141.75 Aligned_cols=225 Identities=14% Similarity=0.095 Sum_probs=156.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|++|||||++-||+++++.|+++ |++|++.+|+..... ...+.......++..+.+|+.|.+++..++..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999 899999999742111 01111112234678899999999998776532
Q ss_pred -CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~--------- 150 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI--------- 150 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC---------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCC---------
Confidence 379999999996532 22334566789999999999888763 223 5799999997654211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC------CCChHHHHHHHHHcCCceEEecCC
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQF------PEKLIPKFILLAMKGQQLPIHGNG 225 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 225 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+..+... ................|+.
T Consensus 151 -----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~----- 220 (258)
T d1iy8a_ 151 -----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK----- 220 (258)
T ss_dssp -----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC-----
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC-----
Confidence 12357999999999998888766 4899999999998654110 0001122233333322221
Q ss_pred CceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 226 SNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 226 ~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
-+...+|+|++++.++... ..|+.+.+-+|..
T Consensus 221 ----R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 221 ----RYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp ----SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred ----CCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 3466899999999998642 3678898887754
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.58 E-value=1.9e-14 Score=138.11 Aligned_cols=218 Identities=14% Similarity=0.114 Sum_probs=151.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCC-CHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDIT-CADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~--- 84 (684)
+.+|+||||||++.||..++++|+++ |.+|+++.|+.... ....+.......++.++.+|+. +.+.+.+++..
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999 89888887764221 1222222233456888999997 55555444321
Q ss_pred --CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHh----c--CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL----T--GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||+||... ++..+..+++|+.++.++.+++.. . +...++|++||...+..
T Consensus 81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~------------ 144 (254)
T d1sbya1 81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA------------ 144 (254)
T ss_dssp HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------
T ss_pred HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC------------
Confidence 37999999999753 477889999999999888887743 1 23478999999776432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC---CCCC-ChHHHHHHHHHcCCceEEecCCCceE
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPN---QFPE-KLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|+....+.+.++.+ +++++..+.||.|..+. .... ..... ....... +
T Consensus 145 --~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~------------~ 209 (254)
T d1sbya1 145 --IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR-VAELLLS------------H 209 (254)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT-HHHHHTT------------S
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHH-HHhcccc------------C
Confidence 122347999999999988877655 48999999999997641 0000 00001 1111111 1
Q ss_pred ecccHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRGVIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~~~~~~~ni~~~~ 260 (684)
.....+++|++++.+++....|+++.+.+|.
T Consensus 210 ~~~~~e~va~~~~~~~~~~~tG~vi~vdgG~ 240 (254)
T d1sbya1 210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp CCEEHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred CCCCHHHHHHHHHHhhhCCCCCCEEEECCCE
Confidence 2235799999999999887788888887763
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.58 E-value=1.4e-14 Score=139.42 Aligned_cols=221 Identities=11% Similarity=0.036 Sum_probs=153.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhc----c
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLV----S 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~----~ 84 (684)
.+|+||||||++.||+++++.|+++ |++|+..+|+.. .++.... ......+.++.+|+.+.+++++++. .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~--~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEK--ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999 899999999742 2111110 1123457788999999998766542 2
Q ss_pred C--CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 E--GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 ~--~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
. .+|++||+||..... ...+++...+++|+.++..+.+++. +.+ ..++|++||.......
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~--------- 150 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL--------- 150 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC---------
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccccc---------
Confidence 2 589999999976532 2334566788999999988887664 333 6899999997764321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCceEEecCCCc
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.....|+.+|...+.+.+.++.++ ++++..+.||.+..+..... ..............++
T Consensus 151 -----~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-------- 217 (258)
T d1ae1a_ 151 -----PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-------- 217 (258)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--------
T ss_pred -----ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC--------
Confidence 123479999999999999887764 78999999999976532100 0112233333322221
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
.-+...+|+|.+++.++... ..|+.+.+-+|
T Consensus 218 -gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 218 -GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 12577899999999999532 36778888766
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.57 E-value=4.5e-14 Score=137.10 Aligned_cols=227 Identities=16% Similarity=0.156 Sum_probs=156.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
.+.+|++|||||++.||+++++.|+++ |++|++.+|+.. ..+.+. .......+.++.+|+.|.+++.+++..
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADD--HGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA 78 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 357799999999999999999999999 899999999742 222111 112234678899999999988776632
Q ss_pred --CCCCEEEEcCccCCcC------CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD------NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+-...
T Consensus 79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~------ 151 (268)
T d2bgka1 79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE------ 151 (268)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT------
T ss_pred HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccccc------
Confidence 3899999999965321 1223456678999999888887764 333 57999999876542211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEEecCCCc
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPIHGNGSN 227 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+.... ..--............ +.
T Consensus 152 -------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~~------ 217 (268)
T d2bgka1 152 -------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-LK------ 217 (268)
T ss_dssp -------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-SC------
T ss_pred -------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-cC------
Confidence 11236999999999999888766 48999999999998764211 1111222222222111 10
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.-+...+|+|++++.++... ..|+++.+-+|-+
T Consensus 218 -gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 218 -GTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp -SCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -CCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence 13467899999999998543 3678999987743
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.6e-14 Score=136.56 Aligned_cols=221 Identities=21% Similarity=0.186 Sum_probs=154.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+. +..+.+.. ...+..++.+|+.|.+++.+++..
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~--~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDE--SGGRALEQ--ELPGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHH--HCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCH--HHHHHHHH--hcCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 46799999999999999999999999 89999999974 22222221 124678899999999998776543
Q ss_pred CCCCEEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||.... +...+++...+++|+.++..+.+++. +.+ .++|++||...+-..
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~~~---------- 145 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQ---------- 145 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHHCC----------
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCcccccccccccc----------
Confidence 379999999996432 12334466788999999998888774 323 699999997664221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC----CCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQ----FPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.|-.+.. ....-....+.......|+
T Consensus 146 ----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------- 212 (250)
T d1ydea1 146 ----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL--------- 212 (250)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------
T ss_pred ----cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------
Confidence 12357999999999999888776 489999999999854310 0000011222222222222
Q ss_pred EecccHHHHHHHHHHHHhcC--CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG--VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~--~~~~~~ni~~~~~ 261 (684)
.-+...+|+|++++.++... ..|+.+.+-+|-.
T Consensus 213 ~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 213 GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred CCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 13467899999999888532 2577888877643
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.57 E-value=3.7e-15 Score=144.21 Aligned_cols=230 Identities=15% Similarity=0.113 Sum_probs=151.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
+.+|++|||||++-||+++++.|+++ |++|++.+|+... ..+.+.. .....++.++.+|+.|.+++.+++..
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~-~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAA-EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHH-HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999 8999999997421 1111110 11234678899999999988777643
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++ ++.+ -.++|++||...+...
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~-------- 149 (260)
T d1x1ta1 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS-------- 149 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--------
T ss_pred HHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceecc--------
Confidence 3799999999976432 233456678899999988877665 3333 4799999997664221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCce---EEecCCCc
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQL---PIHGNGSN 227 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 227 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... ..+............. ........
T Consensus 150 ------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P 221 (260)
T d1x1ta1 150 ------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE--KQISALAEKNGVDQETAARELLSEKQP 221 (260)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCT
T ss_pred ------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh--hhhhhhhhhcCCChHHHHHHHHHhcCC
Confidence 22357999999999999888776 4789999999998655321 1111110000000000 00000000
Q ss_pred eEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 228 VRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 228 ~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
..-+...+|+|++++.++... ..|+.+.+-+|
T Consensus 222 l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 113567899999999998542 36788888766
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.57 E-value=7.1e-15 Score=141.61 Aligned_cols=215 Identities=19% Similarity=0.129 Sum_probs=151.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
|.+|||||++.||+++++.|+++ |++|++.+|+.. .+..+.. .....++.++.+|+.|.+++..++.. .
T Consensus 2 KValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDA--TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 77 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 44699999999999999999999 899999999742 2221111 11234688899999999987766532 3
Q ss_pred CCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|++||+||..... .+.+++...+++|+.++.++.+++. +.+...++|++||...+..
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~------------- 144 (255)
T d1gega_ 78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG------------- 144 (255)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------------
T ss_pred CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-------------
Confidence 799999999975432 2334566788999999988887753 3343578999999765421
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHH---------------HHHHcCCce
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFI---------------LLAMKGQQL 219 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~---------------~~~~~~~~~ 219 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+. ...+. ....+..|+
T Consensus 145 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 217 (255)
T d1gega_ 145 -NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM------WAEIDRQVSEAAGKPLGYGTAEFAKRITL 217 (255)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH------HHHHHHHHHHHHTCCTTHHHHHHHTTCTT
T ss_pred -CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH------HhhhhhhhHhhhcccchhHHHHHHhcCCC
Confidence 112356999999999999888766 48999999999885431 11111 111111111
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.-+...+|+|+++..++... ..|+.+.+-+|-
T Consensus 218 ---------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 218 ---------GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp ---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred ---------CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 13467899999999998542 367888887764
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.2e-14 Score=136.99 Aligned_cols=222 Identities=17% Similarity=0.121 Sum_probs=157.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-CCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-EGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~ 87 (684)
...+|++|||||++-||+++++.|+++ |++|++.+|++ .+++.+ ....+++...+|+.+.+..+..... .++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~--~~l~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~i 75 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINE--SKLQEL---EKYPGIQTRVLDVTKKKQIDQFANEVERL 75 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCH--HHHGGG---GGSTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCH--HHHHHH---HhccCCceeeeeccccccccccccccccc
Confidence 356799999999999999999999999 89999999974 233332 2235688888999988877766533 479
Q ss_pred CEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 88 DTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 88 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
|++||+||..... .+.+++...+++|+.++..+.+++.. .+ ..++|++||...- ..+.
T Consensus 76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~-------------~~~~ 141 (245)
T d2ag5a1 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS-------------VKGV 141 (245)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT-------------TBCC
T ss_pred eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhc-------------cCCc
Confidence 9999999976542 23335667889999999988877642 23 5799999985320 0122
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCceEEecCCCceEecc
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF----PEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (684)
.....|+.+|...+.+.+.++.++ ++++..+.||.+-.+... .......+........++. -+.
T Consensus 142 ~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~~ 212 (245)
T d2ag5a1 142 VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG---------RFA 212 (245)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS---------SCE
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC---------CCc
Confidence 334579999999999999888774 799999999998764210 0011222333333333221 346
Q ss_pred cHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 233 YCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 233 ~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
..+|+|+++..++... ..|+.+.+.+|.
T Consensus 213 ~pedva~~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 213 TAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp EHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence 7899999999999643 367888888764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.56 E-value=7.4e-15 Score=141.77 Aligned_cols=221 Identities=17% Similarity=0.154 Sum_probs=154.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+|.+|||||++.||+++++.|+++ |++|++.+|+.. .+..... .....++..+++|+.|.+++..++..
T Consensus 2 gKValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEE--GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 467799999999999999999999 899999999742 2211111 01234688999999999988766532
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-----CCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-----GQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++... ....++|++||...+...
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~---------- 147 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------- 147 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC----------
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc----------
Confidence 3799999999976432 333456678999999999999887531 124689999987654221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCceEEec
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQF---------PEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
.....|+.+|...+.+.+.++.++ ++++..+.||.+-.+... .............+..|+.
T Consensus 148 ----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg--- 220 (257)
T d2rhca1 148 ----VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG--- 220 (257)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---
T ss_pred ----ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---
Confidence 123569999999999999988774 688999999988543100 0011222333333322221
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
-+...+|+|+++..++... ..|+.+.+-+|
T Consensus 221 ------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 221 ------RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp ------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ------CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 3467899999999998532 36788888765
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.56 E-value=9.7e-15 Score=140.09 Aligned_cols=222 Identities=13% Similarity=0.086 Sum_probs=152.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC-CCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH-PSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
..+|++|||||++.||+++++.|+++ |++|++.+|+.. ..+.+. ......++.++.+|+.|.+++.+++..
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSD--VGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999 899999999642 222111 112245788999999999987766532
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
.++|++||+||...... ..+++...+++|+.++..+.+++. +.+.-.++|++||...+-.
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~----------- 148 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG----------- 148 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----------
Confidence 37999999999765332 233455688999999998888764 3332248999999765321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+-.+.... ..-...... .....++ .-
T Consensus 149 ---~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~--~~~~~pl-------~R 215 (251)
T d1zk4a1 149 ---DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMS--QRTKTPM-------GH 215 (251)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHHT--STTTCTT-------SS
T ss_pred ---CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHh-cCCHHHHHH--HHhCCCC-------CC
Confidence 112357999999999988776543 47999999999986542100 000111111 1111111 13
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|++++.++... ..|+.+.+-+|
T Consensus 216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 567899999999988542 36788888766
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=3.1e-14 Score=139.86 Aligned_cols=229 Identities=14% Similarity=0.153 Sum_probs=155.7
Q ss_pred CCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCC---CCCCCCCceEEEecCCCHHHHH
Q 035631 5 FEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLH---PSRASPNFKFLKGDITCADLMN 79 (684)
Q Consensus 5 ~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~---~~~~~~~~~~~~~Dl~d~~~~~ 79 (684)
..|-...+|++|||||++.||+++++.|+++ |++|++.+|+..... ...+. ......++..+.+|+.|.+++.
T Consensus 5 ~~~g~L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~ 82 (297)
T d1yxma1 5 LAPGLLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 82 (297)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHH
Confidence 3444567899999999999999999999999 899999999742111 11111 1123457888999999999877
Q ss_pred Hhhcc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEeCcccccCCC
Q 035631 80 YLLVS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKL----TGQVKRFIHVSTDEVYGETD 146 (684)
Q Consensus 80 ~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~i~~SS~~vyg~~~ 146 (684)
.++.. .++|++||+||..... ...+++...+++|+.++..+.+++.. .+ -.++|++||....+
T Consensus 83 ~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~~--- 158 (297)
T d1yxma1 83 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKAG--- 158 (297)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTTC---
T ss_pred HHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccccc---
Confidence 76532 3799999999965432 23345667889999999988887743 22 46788877643221
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCceEE
Q 035631 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFP--EKLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~ 221 (684)
......|+.+|...+.+.+..+.+. ++++..+.||.|..+.... ......+.....+..++
T Consensus 159 ------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl-- 224 (297)
T d1yxma1 159 ------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-- 224 (297)
T ss_dssp ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT--
T ss_pred ------------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC--
Confidence 1123579999999999998888764 7999999999987653210 00011111111111111
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
.-+...+|+|.+++.++... ..|+++.+.+|.
T Consensus 225 -------gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~ 259 (297)
T d1yxma1 225 -------KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR 259 (297)
T ss_dssp -------SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -------CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence 12456799999999999543 367899998774
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=6.6e-15 Score=141.76 Aligned_cols=225 Identities=14% Similarity=0.045 Sum_probs=151.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|++|||||++.||+++++.|+++ |++|++.+|+..... ...+.......++.++.+|+.|.+++.+++..
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999 899999999742211 11122222334688899999999887766532
Q ss_pred -CCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHh----c--CCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL----T--GQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
.++|++||+||... ..+++..+++|+.++.++..++.. . +...++|++||...+-.
T Consensus 80 ~G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~------------- 142 (254)
T d2gdza1 80 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP------------- 142 (254)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------------
T ss_pred cCCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-------------
Confidence 37999999999864 356788999999988877766642 2 12367999999765421
Q ss_pred CCCCCChhHHHHHHHHHHHHH--HH---HhcCCCEEEEeeCceeCCCCC--CCC----hHHHHHHHHHcCCceEEecCCC
Q 035631 158 QLLPTNPYSATKAGAEMLVMA--YH---RSYGLPTITTRGNNVYGPNQF--PEK----LIPKFILLAMKGQQLPIHGNGS 226 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~--~~---~~~~~~~~ilR~~~v~G~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~ 226 (684)
......|+.+|...+.+.+. .+ ..+++++..+.||.+-.+... ... ........+... +++
T Consensus 143 -~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--~p~----- 214 (254)
T d2gdza1 143 -VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM--IKY----- 214 (254)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH--HHH-----
T ss_pred -CCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc--CCC-----
Confidence 12234799999999988764 22 335899999999988533100 000 000001111110 010
Q ss_pred ceEecccHHHHHHHHHHHHhcCC-CCcEEEecCCCccCH
Q 035631 227 NVRSYLYCADVAEAFDVILHRGV-IGHVYNVGTKKERSV 264 (684)
Q Consensus 227 ~~~~~i~~~D~a~~i~~~~~~~~-~~~~~ni~~~~~~t~ 264 (684)
.-+...+|+|++++.++.++. .|+++.+.+|..+.+
T Consensus 215 --~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~ 251 (254)
T d2gdza1 215 --YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHF 251 (254)
T ss_dssp --HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEE
T ss_pred --CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeec
Confidence 123567999999999997653 678899987766544
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.55 E-value=9.4e-15 Score=141.30 Aligned_cols=230 Identities=13% Similarity=0.098 Sum_probs=155.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
..+|++|||||++.||.++++.|+++ |++|++.+|+...... ..+. .....++..+.+|+.|.+++.++++.
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVG-KEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHH-HHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH-HHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 8999999997532110 0010 01234688899999999988766532
Q ss_pred --CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+...+++..||...+.......
T Consensus 84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~----- 158 (260)
T d1h5qa_ 84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----- 158 (260)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-----
T ss_pred HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc-----
Confidence 3799999999975432 2334566788999998888776553 223346677777655432221110
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEec
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (684)
.+......|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ..............-|+. -+
T Consensus 159 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~--~~~~~~~~~~~~~~~pl~---------R~ 225 (260)
T d1h5qa_ 159 --NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT--AHMDKKIRDHQASNIPLN---------RF 225 (260)
T ss_dssp --TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG--GGSCHHHHHHHHHTCTTS---------SC
T ss_pred --ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch--hccCHHHHHHHHhcCCCC---------CC
Confidence 01123357999999999999888765 479999999999865532 112233444444433322 23
Q ss_pred ccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 232 LYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 232 i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
...+|+|+++..++... ..|+.+.+-+|.
T Consensus 226 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 226 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred cCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 55799999999988543 367888888764
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.54 E-value=2e-14 Score=136.96 Aligned_cols=220 Identities=17% Similarity=0.155 Sum_probs=154.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
.+|++|||||++.||.++++.|+++ |++|++.+|+.. +...... ....++.++++|+.+.+.+.+++.. .
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g 78 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREER--LLAEAVA-ALEAEAIAVVADVSDPKAVEAVFAEALEEFG 78 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-TCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-HcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999 899999999752 2222111 1235678899999999998776542 3
Q ss_pred CCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++|++||+|+...... ..+++...+++|+.++..+.+++...- .-..++.+||.+.... .
T Consensus 79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~---------------~ 143 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA---------------F 143 (241)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH---------------H
T ss_pred CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc---------------c
Confidence 7999999999764322 223455788999999999998876432 2344555555332111 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...|.+.+.++++. ++++..+.||.+-.+.. ....+...+...+..++. -+...+|+
T Consensus 144 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~--~~~~~~~~~~~~~~~p~~---------r~~~p~dv 212 (241)
T d2a4ka1 144 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT--AGLPPWAWEQEVGASPLG---------RAGRPEEV 212 (241)
T ss_dssp HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG--TTSCHHHHHHHHHTSTTC---------SCBCHHHH
T ss_pred CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH--HhhhHhHHHHHHhCCCCC---------CCcCHHHH
Confidence 13469999999999999998774 68999999999855422 123334444444433322 34578999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
|++++.++... ..|+++.+-+|.+
T Consensus 213 a~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 213 AQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 99999999643 3677888877753
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.54 E-value=1.2e-14 Score=138.58 Aligned_cols=218 Identities=14% Similarity=0.098 Sum_probs=151.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc-----C
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-----E 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 85 (684)
+-||||||++-||+++++.|+++ |++|++.+++.. ...+.+.. .....++.++++|+.|.+++.+++.. .
T Consensus 2 pV~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSA-KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999 899988755321 11111111 01134678899999999988776532 3
Q ss_pred CCCEEEEcCccCCc----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|++||+||.... +.+.++++..+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~------------ 145 (244)
T d1edoa_ 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN------------ 145 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC------------
T ss_pred CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCC------------
Confidence 79999999997653 23334566788999999988887764 333 5799999997664221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ..+.....+......++. -+...
T Consensus 146 --~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~--~~~~~~~~~~~~~~~pl~---------R~~~p 212 (244)
T d1edoa_ 146 --IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT--AKLGEDMEKKILGTIPLG---------RTGQP 212 (244)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH--HTTCHHHHHHHHTSCTTC---------SCBCH
T ss_pred --CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH--HHhhHHHHHHHHhcCCCC---------CCcCH
Confidence 12357999999999999888776 489999999998864421 112223334443333221 34568
Q ss_pred HHHHHHHHHHHhcC----CCCcEEEecCC
Q 035631 235 ADVAEAFDVILHRG----VIGHVYNVGTK 259 (684)
Q Consensus 235 ~D~a~~i~~~~~~~----~~~~~~ni~~~ 259 (684)
+|+|+++..++..+ ..|+.+.+.+|
T Consensus 213 ~dvA~~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 213 ENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence 99999999886332 36788888766
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=3.6e-14 Score=137.14 Aligned_cols=226 Identities=14% Similarity=0.077 Sum_probs=151.4
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc---
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS--- 84 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 84 (684)
+.+|++|||||+| -||++++++|+++ |++|++.+|+........ ...........+++|+.|.++++.++..
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 3578999999998 6999999999999 899998888642211100 0011123567899999999888776532
Q ss_pred --CCCCEEEEcCccCCc--------CCCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCC
Q 035631 85 --EGIDTIMHFAAQTHV--------DNSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGN 153 (684)
Q Consensus 85 --~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~ 153 (684)
.++|++||+|+.... +....++...+++|+.++..+.+++... ..-.++|++||......
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~--------- 153 (256)
T d1ulua_ 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------- 153 (256)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------
T ss_pred hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC---------
Confidence 379999999986431 1222335567899999999888887542 11258999998665322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 154 PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 154 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+..+................+..|+. -
T Consensus 154 -----~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R 219 (256)
T d1ulua_ 154 -----VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------R 219 (256)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------S
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------C
Confidence 122357999999999999888776 48999999999987654321111123333333322221 2
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+...+|+|+++..++... ..|+.+.+-+|..
T Consensus 220 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 220 NITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 456799999999998643 3678888877643
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.53 E-value=5.8e-14 Score=133.22 Aligned_cols=212 Identities=12% Similarity=0.100 Sum_probs=147.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH-HHHHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA-DLMNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d 88 (684)
+.+|++|||||++.||+++++.|+++ |++|++.+|+.. ..+. ...+++.+|+.+. +.+.+.+ .++|
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~--~l~~-------~~~~~~~~Dv~~~~~~~~~~~--g~iD 68 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEE--LLKR-------SGHRYVVCDLRKDLDLLFEKV--KEVD 68 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHH-------TCSEEEECCTTTCHHHHHHHS--CCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHh-------cCCcEEEcchHHHHHHHHHHh--CCCc
Confidence 35689999999999999999999999 899999999741 1211 2456788999864 3343444 5899
Q ss_pred EEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLL 160 (684)
Q Consensus 89 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~ 160 (684)
++||+||..... .+.+++...+++|+.++..+.+++. +.+ ..++|++||...... ..
T Consensus 69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~--------------~~ 133 (234)
T d1o5ia_ 69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP--------------IE 133 (234)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--------------CT
T ss_pred EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccc--------------cc
Confidence 999999965432 2334456778999998887777663 333 578999999765432 22
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 161 PTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 161 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.++.+ +++++..+.||.+-.+.... ..-........+..|+ .-+...+|+
T Consensus 134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedi 203 (234)
T d1o5ia_ 134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIPM---------RRMAKPEEI 203 (234)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTSTT---------SSCBCHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh-hcCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence 2347999999999888888766 37999999999886653200 0011222223332221 135678999
Q ss_pred HHHHHHHHhcC---CCCcEEEecCC
Q 035631 238 AEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 238 a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
|.++..++... ..|+++.+.+|
T Consensus 204 A~~v~fL~S~~s~~itG~~i~vDGG 228 (234)
T d1o5ia_ 204 ASVVAFLCSEKASYLTGQTIVVDGG 228 (234)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhChhhcCCcCcEEEECcc
Confidence 99999988542 36788888766
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.53 E-value=2.5e-14 Score=138.56 Aligned_cols=224 Identities=15% Similarity=0.086 Sum_probs=146.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccC----CCC-CCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL----HPS-RASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l----~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+|.+|||||++-||++++++|+++ |++|++.+|+.. .+..+ ... ....++..+.+|+.+.+++.+++..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 5789999999999999999999999 899999999742 22111 111 1234588999999999988776632
Q ss_pred ----CCCCEEEEcCccCCcC--------CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcc-cccCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVD--------NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDE-VYGETDMES 149 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~-vyg~~~~~~ 149 (684)
.++|++||+||..... .+.++++..+++|+.++..+.+++... ....++|.++|.. .+.
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~------ 153 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH------ 153 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS------
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc------
Confidence 3799999999964321 122346678899999998888776431 0124666666532 221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCce
Q 035631 150 DIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-------KLIPKFILLAMKGQQL 219 (684)
Q Consensus 150 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~ 219 (684)
+......|+.+|...+.+.+.++.+ +++++..+.||.|-.+..... .-.........+..|+
T Consensus 154 --------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 225 (264)
T d1spxa_ 154 --------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA 225 (264)
T ss_dssp --------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred --------cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC
Confidence 1112346999999999999888766 489999999999865422100 0011112222221211
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhc---C-CCCcEEEecCCCc
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHR---G-VIGHVYNVGTKKE 261 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~---~-~~~~~~ni~~~~~ 261 (684)
. -+...+|+|+++..++.. . ..|+.+.+-+|..
T Consensus 226 ~---------R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 226 G---------VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp S---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred C---------CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 1 245679999999998852 2 4678898877643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.52 E-value=1.4e-14 Score=139.08 Aligned_cols=222 Identities=13% Similarity=0.146 Sum_probs=150.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
+.+|++|||||++.||+++++.|+++ |++|++.+|+. .....+... ...+..++++|+.|.+++..++..
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINE--AAGQQLAAE-LGERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCH--HHHHHHHHH-HCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCH--HHHHHHHHH-hCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 56799999999999999999999999 89999999964 222222111 134677889999999887766533
Q ss_pred CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT--GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|++||+||..... .+.++++..+++|+.++..+.+++... ..-.++|++||...+-.
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~-------------- 144 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-------------- 144 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC--------------
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC--------------
Confidence 3799999999976432 233446678899999888877776431 11379999999765321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCC---CCCChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.+..+.. .+..... ....... .. ...-.
T Consensus 145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~----~~~~~~~-~~----~~~gr 215 (253)
T d1hxha_ 145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK----EMVLHDP-KL----NRAGR 215 (253)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH----HHHBCBT-TT----BTTCC
T ss_pred ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH----HHHHhCc-cc----cccCC
Confidence 122347999999999988777644 348889999998864310 0000000 0111100 00 00113
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+...+|+|++++.++... ..|+.+++-+|
T Consensus 216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 216 AYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 567899999999998543 36788888665
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.51 E-value=1.7e-13 Score=132.74 Aligned_cols=209 Identities=14% Similarity=0.106 Sum_probs=143.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcc-cccccCCC--CCCCCCceEEEecCCCHHHHHHhhccC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYC-SSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~-~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
....+||||||+|.||++++++|+++ |. .|+.+.|+... +....+.. ......+.++.+|+.|.+++..++...
T Consensus 7 ~p~gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i 84 (259)
T d2fr1a1 7 KPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 84 (259)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CCcCEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence 34579999999999999999999999 66 68888886321 11111110 112346889999999999988876432
Q ss_pred ----CCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCCCCCCCCC
Q 035631 86 ----GIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEAS 157 (684)
Q Consensus 86 ----~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~ 157 (684)
++|.|||+++........ +.....+++|+.++.++.++++..+ ..++|++||....-...
T Consensus 85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~----------- 152 (259)
T d2fr1a1 85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP----------- 152 (259)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT-----------
T ss_pred cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCc-----------
Confidence 589999999976543222 2334567899999999999888765 68999999976642221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHH
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 237 (684)
....|+.+|...+.+.+.+.. .|++++.+.||.+.+++...... ..... . .| ...+..+++
T Consensus 153 ---~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~~~----~~~~~-~-------~G---~~~~~~~~~ 213 (259)
T d2fr1a1 153 ---GLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGPV----ADRFR-R-------HG---VIEMPPETA 213 (259)
T ss_dssp ---TCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC----------------CT-T-------TT---EECBCHHHH
T ss_pred ---ccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccchH----HHHHH-h-------cC---CCCCCHHHH
Confidence 124599999999998877754 49999999999988765321111 11100 0 01 244678999
Q ss_pred HHHHHHHHhcCCCC
Q 035631 238 AEAFDVILHRGVIG 251 (684)
Q Consensus 238 a~~i~~~~~~~~~~ 251 (684)
++++..++......
T Consensus 214 ~~~l~~~l~~~~~~ 227 (259)
T d2fr1a1 214 CRALQNALDRAEVC 227 (259)
T ss_dssp HHHHHHHHHTTCSS
T ss_pred HHHHHHHHhCCCce
Confidence 99999999876544
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=3.5e-14 Score=136.60 Aligned_cols=214 Identities=18% Similarity=0.154 Sum_probs=144.7
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc----CCCCCCCCCceEEEecCCCHHHHHHhh
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN----LHPSRASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
|..+.+|.+|||||++-||.++++.|+++ |++|++.+|+.. +... +........+.++++|+.+++++.+++
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v 80 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVG--NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 80 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHH
Confidence 44456799999999999999999999999 899999999742 2222 222222346788999999999877654
Q ss_pred cc-----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHH----HhcC-CCcEEEEEeCcccccCCCCC
Q 035631 83 VS-----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEAC----KLTG-QVKRFIHVSTDEVYGETDME 148 (684)
Q Consensus 83 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~~i~~SS~~vyg~~~~~ 148 (684)
.. .++|++||+||..... .+.+.+...+++|+.++..+.+++ ++.+ .-.++|++||.+.+...
T Consensus 81 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--- 157 (257)
T d1xg5a_ 81 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--- 157 (257)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---
T ss_pred HHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---
Confidence 32 3799999999976543 233445667899998888776665 3322 24799999997654221
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCC--CCCChHHHHHHHHHcCCceEE
Q 035631 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQ--FPEKLIPKFILLAMKGQQLPI 221 (684)
Q Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~ 221 (684)
|......|+.+|...+.+.+.++.+ +++++..+.||.+-.+.. ............ .+
T Consensus 158 ---------p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~------~~- 221 (257)
T d1xg5a_ 158 ---------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT------YE- 221 (257)
T ss_dssp ---------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH------HC-
T ss_pred ---------CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc------CC-
Confidence 1122346999999999999877653 478899999987643310 001111111111 11
Q ss_pred ecCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
...++..+|+|++++.++..+.
T Consensus 222 ------~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 222 ------QMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp ---------CBCHHHHHHHHHHHHHSCT
T ss_pred ------CCCCcCHHHHHHHHHHHhCChh
Confidence 1235678999999999987654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.49 E-value=8.8e-14 Score=132.20 Aligned_cols=197 Identities=16% Similarity=0.111 Sum_probs=139.9
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcE-------EEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYE-------IVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~-------V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
-||||||++-||+++++.|+++ |++ |+..+|+.. .+..+.. ......+..+.+|+.|.+++.+++..
T Consensus 3 VvlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~ 78 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAA--DLEKISLECRAEGALTDTITADISDMADVRRLTTH 78 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHH--HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 3799999999999999999999 665 888888642 2222111 11234578899999999987766532
Q ss_pred -----CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+...
T Consensus 79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~------ 151 (240)
T d2bd0a1 79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF------ 151 (240)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCC------
Confidence 3799999999976532 2334566788999999988877764 333 4799999997664221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... .. . ....
T Consensus 152 --------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~--~~-----------------~-~~~~ 203 (240)
T d2bd0a1 152 --------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG--KV-----------------D-DEMQ 203 (240)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC--CC-----------------C-STTG
T ss_pred --------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh--hc-----------------C-HhhH
Confidence 12357999999999998888766 4789999999998655321 00 0 0011
Q ss_pred EecccHHHHHHHHHHHHhcCC
Q 035631 229 RSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~~ 249 (684)
..+...+|+|++++.++.++.
T Consensus 204 ~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 204 ALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp GGSBCHHHHHHHHHHHHTSCT
T ss_pred hcCCCHHHHHHHHHHHHcCCc
Confidence 134567999999999997654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.49 E-value=5.2e-14 Score=136.85 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=150.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc----CCCC-CCCCCceEEEecCCCHHHHHHhhcc
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN----LHPS-RASPNFKFLKGDITCADLMNYLLVS 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (684)
..+|++|||||++-||+++++.|+++ |++|++.+|+.. .+.. +... ....++..+.+|+.|.+++..++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 78 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSE--RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS 78 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH
Confidence 35789999999999999999999999 899999999742 2211 1111 1224578999999999987766532
Q ss_pred -----CCCCEEEEcCccCCcCCC----CC----ChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeC-cccccCCCC
Q 035631 85 -----EGIDTIMHFAAQTHVDNS----FG----NSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVST-DEVYGETDM 147 (684)
Q Consensus 85 -----~~~d~Vih~a~~~~~~~~----~~----~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS-~~vyg~~~~ 147 (684)
.++|++||+||....... ++ .+...+++|+.++..+.+++... + ...+|+++| .+....
T Consensus 79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~--- 154 (272)
T d1xkqa_ 79 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQA--- 154 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSC---
T ss_pred HHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccC---
Confidence 379999999997643221 11 25667899999988888776432 1 245555555 332211
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC----CCCChHHHHHHHHH-cCCce
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQ----FPEKLIPKFILLAM-KGQQL 219 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~-~~~~~ 219 (684)
......|+.+|...+.+.+.++.+ +++++..+.||.|-.+.. .+............ ....+
T Consensus 155 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (272)
T d1xkqa_ 155 -----------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI 223 (272)
T ss_dssp -----------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred -----------CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCC
Confidence 112346999999999998888766 489999999999865421 00011111111111 11222
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhc---C-CCCcEEEecCCCcc
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHR---G-VIGHVYNVGTKKER 262 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~---~-~~~~~~ni~~~~~~ 262 (684)
++ .-+...+|+|+++..++.. . ..|+++.+-+|..+
T Consensus 224 Pl-------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 224 PI-------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp TT-------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CC-------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 21 1346789999999998842 2 46889999877543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.47 E-value=1.4e-13 Score=133.84 Aligned_cols=226 Identities=13% Similarity=0.062 Sum_probs=151.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc----CCCC-CCCCCceEEEecCCCHHHHHHhhcc-
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN----LHPS-RASPNFKFLKGDITCADLMNYLLVS- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~- 84 (684)
.+|++|||||++.||+++++.|+++ |++|++.+|+.. .++. +... ....++..+.+|+.|.+++.+++..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNED--RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 78 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence 5789999999999999999999999 899999999742 2211 1111 1124678999999999987766532
Q ss_pred ----CCCCEEEEcCccCCcCC------CCCChHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 ----EGIDTIMHFAAQTHVDN------SFGNSFEFTNNNIYGTHVLLEACKLT---GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ----~~~d~Vih~a~~~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.++|++||+||...... ..+++...+++|+.++..+.+++... ++-.+++++||...+..
T Consensus 79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~------- 151 (274)
T d1xhla_ 79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA------- 151 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC-------
T ss_pred HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc-------
Confidence 37999999999643211 22345678899999999888777432 22467887777543321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC---CCCC-hHHHHHHHHHc-CCceEEec
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQ---FPEK-LIPKFILLAMK-GQQLPIHG 223 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~---~~~~-~~~~~~~~~~~-~~~~~~~~ 223 (684)
......|+.+|...+.+.+..+.+ +++++..+.||.+-.+.. .... ........... ...+++
T Consensus 152 -------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-- 222 (274)
T d1xhla_ 152 -------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-- 222 (274)
T ss_dssp -------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--
T ss_pred -------CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC--
Confidence 112346999999999999888766 489999999999865421 0000 11111111111 121221
Q ss_pred CCCceEecccHHHHHHHHHHHHhc---C-CCCcEEEecCCCc
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHR---G-VIGHVYNVGTKKE 261 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~---~-~~~~~~ni~~~~~ 261 (684)
.-+...+|+|++++.++.. . ..|+.+.+-+|..
T Consensus 223 -----gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 223 -----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp -----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred -----CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 1345789999999988842 2 4788999987754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.47 E-value=1.5e-13 Score=133.87 Aligned_cols=220 Identities=16% Similarity=0.119 Sum_probs=148.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhcc-----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVS----- 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 84 (684)
..+|+||||||++.||+++++.|+++ |++|++.+|+. +.+..+.. ....++..+.+|+.+.+.+.+++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~--~~l~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSA--ERLAELET-DHGDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHH-HHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCH--HHHHHHHH-HcCCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999 89999999974 22222211 1134678899999999887766532
Q ss_pred CCCCEEEEcCccCCcCC-----CCC----ChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHVDN-----SFG----NSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~~-----~~~----~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
..+|++||+||...... ..+ .+...+++|+.++..+.+++. +.+ .++|++||...+-.
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~------- 148 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYP------- 148 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTST-------
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccC-------
Confidence 38999999999653211 112 256788999999888877763 333 68888888654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC-------Ch-HHHHHHHHHcCCceEE
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY--GLPTITTRGNNVYGPNQFPE-------KL-IPKFILLAMKGQQLPI 221 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~-------~~-~~~~~~~~~~~~~~~~ 221 (684)
......|+.+|...+.+.+.++.+. ++++..+.||.|-.+...+. .. ...+........|+.
T Consensus 149 -------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg- 220 (276)
T d1bdba_ 149 -------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG- 220 (276)
T ss_dssp -------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS-
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC-
Confidence 1123469999999999988887764 47889999999865421110 00 011122222222211
Q ss_pred ecCCCceEecccHHHHHHHHHHHHh-c--C-CCCcEEEecCC
Q 035631 222 HGNGSNVRSYLYCADVAEAFDVILH-R--G-VIGHVYNVGTK 259 (684)
Q Consensus 222 ~~~~~~~~~~i~~~D~a~~i~~~~~-~--~-~~~~~~ni~~~ 259 (684)
-+...+|+|.+++.++. . . ..|+.+++-+|
T Consensus 221 --------R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 221 --------RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp --------SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred --------CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 23456999999988774 2 2 46889999776
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=5.7e-14 Score=133.57 Aligned_cols=199 Identities=13% Similarity=0.006 Sum_probs=141.4
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
..++.||||||++-||++++++|+++ |++|++.+|+.. ++..+.. .....++..+.+|+.|.+.+..++.
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~--~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKH--GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 899999999742 2222111 1224578899999999998776653
Q ss_pred -cCCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 84 -SEGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 84 -~~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
...+|++||+||........ +..+..+++|+.++.++.+++. +.+ -.++|++||...+-..
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~--------- 150 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV--------- 150 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH---------
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCC---------
Confidence 23799999999976543222 3355678999999988887663 334 5799999997654221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh------cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS------YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|++.+.+.+.++.+ .|+.+..+.||.|--+... ... . ..
T Consensus 151 -----~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~--~~~------------~-------~~ 204 (244)
T d1yb1a_ 151 -----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--NPS------------T-------SL 204 (244)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT--CTH------------H-------HH
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh--CcC------------c-------cc
Confidence 11246999999999998888765 3688999999987543211 100 0 00
Q ss_pred EecccHHHHHHHHHHHHhcC
Q 035631 229 RSYLYCADVAEAFDVILHRG 248 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~ 248 (684)
...+..+|+|+.+...+..+
T Consensus 205 ~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 205 GPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp CCCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 12345789999988877654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.46 E-value=6.2e-13 Score=127.69 Aligned_cols=177 Identities=17% Similarity=0.158 Sum_probs=123.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc------
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV------ 83 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 83 (684)
|.+|+||||||++-||.+++++|+++|..+.|++.+|+.. ....+.. ....++.++.+|+.+.+++.+++.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~--~~~~l~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE--KATELKS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGG--GCHHHHT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHH--HHHHHHH-hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 3458999999999999999999999954468999998752 3333322 234578999999999988765542
Q ss_pred -cCCCCEEEEcCccCCc-C-CCC---CChHHHHHHHHHHHHHHHHHHHh----cC----------CCcEEEEEeCccccc
Q 035631 84 -SEGIDTIMHFAAQTHV-D-NSF---GNSFEFTNNNIYGTHVLLEACKL----TG----------QVKRFIHVSTDEVYG 143 (684)
Q Consensus 84 -~~~~d~Vih~a~~~~~-~-~~~---~~~~~~~~~n~~~~~~ll~~~~~----~~----------~~~~~i~~SS~~vyg 143 (684)
..++|++||+||.... . ... ++....+++|+.++..+.+++.. .+ ...+++.+|+...+-
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 1358999999997542 1 111 23456889999999888777631 11 135677777754432
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCcee
Q 035631 144 ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVY 196 (684)
Q Consensus 144 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 196 (684)
.... ...+..+...|+.||++...+.+.++.+ .++++..+.||+|-
T Consensus 158 ~~~~-------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 158 TDNT-------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp TTCC-------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred cCCc-------ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 1111 1122334457999999999999888766 37999999999874
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.45 E-value=3e-13 Score=130.50 Aligned_cols=224 Identities=17% Similarity=0.080 Sum_probs=150.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
.+|+||||||++-||.++++.|+++ |++|++..++... ..+.+.. .....++..+.+|+.|.+++..++..
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~-~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSK-AAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChH-HHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999 8999987654321 1111110 11234688999999998887765531
Q ss_pred -CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcc-cccCCCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDE-VYGETDMESDIGNPEAS 157 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~-vyg~~~~~~~~~~~e~~ 157 (684)
..+|++||+||..... ...+.++..+++|+.+...+++++... ..-.+++.++|.. .+..
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------- 148 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------- 148 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-------------
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC-------------
Confidence 3799999999976532 223345578899999998888887542 1124566666532 2211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC-----------CCCCChHHHHHHHHHcCCceEEec
Q 035631 158 QLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPN-----------QFPEKLIPKFILLAMKGQQLPIHG 223 (684)
Q Consensus 158 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (684)
......|+.+|...+.+.+.++.+ +++++..+.||++-.+. .........+.....+..++.
T Consensus 149 -~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--- 224 (259)
T d1ja9a_ 149 -IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK--- 224 (259)
T ss_dssp -CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---
Confidence 112346999999999999888776 48999999999985320 011112233344444443322
Q ss_pred CCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 224 NGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 224 ~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
-+...+|+|++++.++... ..|+++.+-+|.
T Consensus 225 ------R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 225 ------RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp ------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 3467899999999999653 367788887653
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=1.5e-12 Score=126.61 Aligned_cols=228 Identities=13% Similarity=0.071 Sum_probs=153.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC--CCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
++.+|++|||||++-||+++++.|+++ |++|++.+|+... ..+.+.. ......+.++++|+.|.+++..+++.
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~-~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTE-SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchH-HHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 456799999999999999999999999 8999999886421 1111110 11234688899999999887766532
Q ss_pred ---CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCC
Q 035631 85 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEA 156 (684)
Q Consensus 85 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~ 156 (684)
.++|++||.++..... ...++....+++|+.++..+.+++... ..-.++++++|......
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~------------ 159 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK------------ 159 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS------------
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc------------
Confidence 3799999999976543 223345567899999999999888642 22357788877542110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC--------C-CCCCh-HHHHHH-HHHcCCceEEe
Q 035631 157 SQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPN--------Q-FPEKL-IPKFIL-LAMKGQQLPIH 222 (684)
Q Consensus 157 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~--------~-~~~~~-~~~~~~-~~~~~~~~~~~ 222 (684)
+......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+. . ..... -..... ......++
T Consensus 160 -~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--- 235 (272)
T d1g0oa_ 160 -AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--- 235 (272)
T ss_dssp -SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---
T ss_pred -cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---
Confidence 1223356999999999999888776 48999999999985431 0 00011 111111 11122211
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.-+...+|+|.++..++... ..|+.+.+.+|..
T Consensus 236 ------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~ 271 (272)
T d1g0oa_ 236 ------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 271 (272)
T ss_dssp ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred ------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence 13567899999999999643 3678888887743
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.42 E-value=6.7e-13 Score=127.28 Aligned_cols=174 Identities=15% Similarity=0.130 Sum_probs=122.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhc-CCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhc------
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKN-YPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLV------ 83 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~-~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------ 83 (684)
||+||||||++-||.++++.|++. ..|++|++.+|+... .+.+.. .....++.++.+|+.|.+++.+++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ--AKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS--CHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHH--HHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 578999999999999999999852 128999999997532 222211 1123578999999999887765543
Q ss_pred -cCCCCEEEEcCccCCcCC-----CCCChHHHHHHHHHHHHHHHHHHHh----c----------CCCcEEEEEeCccccc
Q 035631 84 -SEGIDTIMHFAAQTHVDN-----SFGNSFEFTNNNIYGTHVLLEACKL----T----------GQVKRFIHVSTDEVYG 143 (684)
Q Consensus 84 -~~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~----~----------~~~~~~i~~SS~~vyg 143 (684)
..++|++||+||...... ..++....+++|+.++..+.+++.. . ....++|++||....
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~- 158 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS- 158 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC-
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-
Confidence 246999999999754321 1122446789999999888877632 1 114689999986432
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 035631 144 ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGP 198 (684)
Q Consensus 144 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 198 (684)
.. ..+......|+.||+....+.+.++.+ +++++..+.||+|--+
T Consensus 159 -~~---------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 159 -IQ---------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp -ST---------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred -cC---------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 11 011222347999999999998877655 4799999999988654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.41 E-value=6.6e-13 Score=126.61 Aligned_cols=203 Identities=15% Similarity=0.129 Sum_probs=129.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~ 428 (684)
+++|||||++-||..+++.|+++|++| .++.+|++|.++++++++.. ++|++||.||
T Consensus 6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG 85 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAA 85 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCc
Confidence 489999999999999999999999987 56789999999988887654 6899999999
Q ss_pred ecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 429 ITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
...... .+.+.++....+++|+.++.++.+++... + .++|++||...+.+. . ....
T Consensus 86 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-----------------~-~~~~ 147 (248)
T d2d1ya1 86 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------------Q-ENAA 147 (248)
T ss_dssp CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------------T-TBHH
T ss_pred CCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----------------c-ccch
Confidence 763211 13334566789999999999999998742 2 379999998554211 1 3467
Q ss_pred hhhhhHhHhhhhhH---Hh--hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccccCC
Q 035631 503 YSKTKAMVTFLSYL---EI--FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPN 577 (684)
Q Consensus 503 Y~~sK~~~E~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 577 (684)
|+.+|...+.+... |. ++..+....|..+.++........ ..+.+..++.+.+. .+ -.
T Consensus 148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~------~p-l~ 210 (248)
T d2d1ya1 148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIAL----------SPDPERTRRDWEDL------HA-LR 210 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------------CHHHHTT------ST-TS
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhc----------CCCHHHHHHHHHhc------CC-CC
Confidence 99999999877322 22 223333333333322221111100 00111111111000 00 01
Q ss_pred CccchhhHHHHHHHHHhcC---ccc-eeEecCCCcc
Q 035631 578 SMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGVI 609 (684)
Q Consensus 578 ~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~~ 609 (684)
.+...+|++.++.+++... ..| .+.+.+|-..
T Consensus 211 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ta 246 (248)
T d2d1ya1 211 RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTA 246 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence 3367899999999998643 445 7888776443
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.41 E-value=4.2e-13 Score=131.81 Aligned_cols=215 Identities=16% Similarity=0.098 Sum_probs=144.0
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC------CCCCCceEEEecCCCHHHHHH
Q 035631 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS------RASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 7 ~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~------~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
|....+|++|||||++.||+++++.|+++ |++|++.+|+............ ........+.+|+.|.+..++
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK 79 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence 44556799999999999999999999999 8999999886421110000000 001233456778888665444
Q ss_pred hh----cc-CCCCEEEEcCccCCcC----CCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCC
Q 035631 81 LL----VS-EGIDTIMHFAAQTHVD----NSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 81 ~~----~~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~ 147 (684)
++ .. .++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-..
T Consensus 80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~-- 156 (302)
T d1gz6a_ 80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN-- 156 (302)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC--
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCC--
Confidence 33 22 3799999999976532 2334566788999999998888764 334 4799999997654221
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.....|+.+|...+.+.+.++.+ +++++..+.|+.+--... ...+.
T Consensus 157 ------------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~---~~~~~---------------- 205 (302)
T d1gz6a_ 157 ------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE---TVMPE---------------- 205 (302)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG---GGSCH----------------
T ss_pred ------------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh---hcCcH----------------
Confidence 12357999999999999888776 478999999987632211 11111
Q ss_pred CCceEecccHHHHHHHHHHHHhcC--CCCcEEEecCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG--VIGHVYNVGTK 259 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~ni~~~ 259 (684)
....++..+|+|.+++.++... ..|+++.+.+|
T Consensus 206 --~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 206 --DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp --HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred --hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 0112334689999999887532 35677777654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.41 E-value=2.3e-13 Score=130.56 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=143.5
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc----c-CCCC
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV----S-EGID 88 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~-~~~d 88 (684)
++|||||++.||+.+++.|+++ |++|++.+|+.. ....+... ...+..+|+.+.+++.++++ . -++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~--~~~~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFK--QKDELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGG--SHHHHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999 899999998642 11111110 11223456666544443331 1 3799
Q ss_pred EEEEcCccCCc-----CCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 89 TIMHFAAQTHV-----DNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 89 ~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
++||+||.... ..+.+++...+++|+.++..+.+++. +.+ -.++|++||...+...
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~-------------- 138 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW-------------- 138 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC--------------
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccc--------------
Confidence 99999986432 12234466788999998888877653 333 4799999997654321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC------ChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE------KLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+..... ..-+.......+..++. -
T Consensus 139 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R 209 (252)
T d1zmta1 139 KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------R 209 (252)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------S
T ss_pred ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------C
Confidence 12347999999999999888766 489999999999976532110 01122333333322221 2
Q ss_pred cccHHHHHHHHHHHHhcCC---CCcEEEecCCC
Q 035631 231 YLYCADVAEAFDVILHRGV---IGHVYNVGTKK 260 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~~---~~~~~ni~~~~ 260 (684)
+...+|+|.+++.++.... .|+.+.+.+|-
T Consensus 210 ~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 210 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 242 (252)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence 4568999999999996543 57889888764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.39 E-value=2.7e-12 Score=121.85 Aligned_cols=200 Identities=14% Similarity=0.155 Sum_probs=134.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHH-------Hhhcc
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMN-------YLLVS 84 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~-------~~~~~ 84 (684)
+|+||||||+|.||+++++.|+++ |++|++++++.... ......+..|..+.+..+ ..+..
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999 89999998864211 112223344444443322 22323
Q ss_pred CCCCEEEEcCccCCc-CCC----CCChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCC
Q 035631 85 EGIDTIMHFAAQTHV-DNS----FGNSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQ 158 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~-~~~----~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~ 158 (684)
.++|++||+||.... ... .+.++..+++|+.++.++.+++... ..-.++|++||...+...
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------------- 136 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------- 136 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-------------
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc-------------
Confidence 468999999995322 111 2234457899999999888887642 223689999997654221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEeccc
Q 035631 159 LLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233 (684)
Q Consensus 159 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (684)
.....|+.+|+..+.+.+.++.+ .++++..+.||.+..+. .+...... ..-.++.
T Consensus 137 -~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~----------~~~~~~~~---------~~~~~~~ 196 (236)
T d1dhra_ 137 -PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------NRKSMPEA---------DFSSWTP 196 (236)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------HHHHSTTS---------CGGGSEE
T ss_pred -cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc----------chhhCccc---------hhhcCCC
Confidence 12347999999999999998765 36889999999886531 11111111 1124567
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEe
Q 035631 234 CADVAEAFDVILHRG---VIGHVYNV 256 (684)
Q Consensus 234 ~~D~a~~i~~~~~~~---~~~~~~ni 256 (684)
.+++|+.+..++... ..|+.+.+
T Consensus 197 pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 197 LEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp HHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred HHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 899999999998643 35666655
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.39 E-value=1.1e-12 Score=126.53 Aligned_cols=223 Identities=14% Similarity=0.106 Sum_probs=145.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhc-CCCcEEEEEcCCCcccccccCC----CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKN-YPDYEIVALDKLDYCSSLKNLH----PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~-~~g~~V~~~~r~~~~~~~~~l~----~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+.+|.++||||++.||.++++.|.+. ..|++|++.+|+.. .+..+. ......++..+.+|+.+.+++.+++.
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES--MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH--HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH--HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 345678899999999999999999862 12899999999742 222221 11123467889999999988777652
Q ss_pred c---------CCCCEEEEcCccCCc-------CCCCCChHHHHHHHHHHHHHHHHHHHhc----C-CCcEEEEEeCcccc
Q 035631 84 S---------EGIDTIMHFAAQTHV-------DNSFGNSFEFTNNNIYGTHVLLEACKLT----G-QVKRFIHVSTDEVY 142 (684)
Q Consensus 84 ~---------~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~~i~~SS~~vy 142 (684)
. ...|++||.||.... ....+++...+++|+.++..+.+++... + ...++|++||...+
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 1 257799999986432 1122345568899999999999888643 1 13589999997654
Q ss_pred cCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCc
Q 035631 143 GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-YGLPTITTRGNNVYGPNQFP---EKLIPKFILLAMKGQQ 218 (684)
Q Consensus 143 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~ 218 (684)
.. ......|+.+|+..+.+.+.++.+ +++++..+.||.+-.+.... ...-+..........+
T Consensus 161 ~~--------------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T d1oaaa_ 161 QP--------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS 226 (259)
T ss_dssp SC--------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred CC--------------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC
Confidence 22 122457999999999999888766 47889999999886541100 0000111111111000
Q ss_pred eEEecCCCceEecccHHHHHHHHHHHHhcC--CCCcEEEe
Q 035631 219 LPIHGNGSNVRSYLYCADVAEAFDVILHRG--VIGHVYNV 256 (684)
Q Consensus 219 ~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~ni 256 (684)
.+ .+...+|+|++++.++... ..|+.+++
T Consensus 227 -----~~----r~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 227 -----DG----ALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp -----TT----CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred -----CC----CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 01 2356899999999888653 24555544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.39 E-value=2.8e-12 Score=126.44 Aligned_cols=226 Identities=13% Similarity=0.106 Sum_probs=148.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhc----
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
..+|++|||||+|.||+++++.|+++ |++|++.+|+..... ...+.. .....+..+.+|+.+.+.+..++.
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~-~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISS-QTGNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHH-hcCCceEEEEecccChHHHHHHhhhhhh
Confidence 34589999999999999999999999 899999999742111 111111 123467889999999998765542
Q ss_pred -cCCCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCC
Q 035631 84 -SEGIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNP 154 (684)
Q Consensus 84 -~~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 154 (684)
..++|++||+||......... +....+.+|......+...+ ........++.+||.......
T Consensus 100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~--------- 170 (294)
T d1w6ua_ 100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS--------- 170 (294)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC---------
T ss_pred hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc---------
Confidence 247999999999765432222 24455677777766665443 222334567777765432211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCceEEecCCCceEe
Q 035631 155 EASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRS 230 (684)
Q Consensus 155 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+..... .-.........+.-++. -
T Consensus 171 -----~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R 236 (294)
T d1w6ua_ 171 -----GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------R 236 (294)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------S
T ss_pred -----cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------C
Confidence 12346999999999999888766 479999999999976532100 00112233333332221 2
Q ss_pred cccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 231 YLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 231 ~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
+...+|+|+++..++... ..|+++.+-+|..
T Consensus 237 ~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 237 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEE 270 (294)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence 456899999999999643 3678999987743
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=1.7e-12 Score=126.79 Aligned_cols=221 Identities=18% Similarity=0.090 Sum_probs=141.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEE---EEcCCCccc-ccccC-C-CCCCCCCceEEEecCCCHHHHHHhhcc--
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIV---ALDKLDYCS-SLKNL-H-PSRASPNFKFLKGDITCADLMNYLLVS-- 84 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~---~~~r~~~~~-~~~~l-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 84 (684)
|-||||||++.||+++++.|++. |.+|+ ...|+.... ..... . ......++..+.+|+.|.+++..++..
T Consensus 3 kVvlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 80 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CEEEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence 44689999999999999999999 55544 444432111 11110 0 012245788999999999998877643
Q ss_pred -CCCCEEEEcCccCCcCC----CCCChHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEeCcccccCCCCCCCCCCCC
Q 035631 85 -EGIDTIMHFAAQTHVDN----SFGNSFEFTNNNIYGTHVLLEAC----KLTGQVKRFIHVSTDEVYGETDMESDIGNPE 155 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~e 155 (684)
..+|+++|+|+...... ..+++...+++|+.++.++.+++ ++.+ -.++|++||...+-.
T Consensus 81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~----------- 148 (285)
T d1jtva_ 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMG----------- 148 (285)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSC-----------
T ss_pred ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCC-----------
Confidence 47999999999765432 22345567899999988888776 3344 579999999765421
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CC-----------hHHHHHHHHHcCCce
Q 035631 156 ASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFP--EK-----------LIPKFILLAMKGQQL 219 (684)
Q Consensus 156 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~-----------~~~~~~~~~~~~~~~ 219 (684)
......|+.+|+..+.+.+.++.+ +|+++..+.||.|--+.... .. ....+.......+.+
T Consensus 149 ---~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T d1jtva_ 149 ---LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV 225 (285)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence 122357999999999998888766 48999999999986442100 00 001111111111111
Q ss_pred EEecCCCceEecccHHHHHHHHHHHHhcCCCCcEEEec
Q 035631 220 PIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVG 257 (684)
Q Consensus 220 ~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ni~ 257 (684)
.. ......+|+|++++.++..+.+.-.|..+
T Consensus 226 ~~-------~~~~~PeeVA~~v~~~~~~~~p~~ry~~g 256 (285)
T d1jtva_ 226 FR-------EAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (285)
T ss_dssp HH-------HHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred hc-------ccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence 10 12345799999999999876654344433
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.38 E-value=7.5e-13 Score=126.90 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=99.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||++-||.+++++|+++|++| .++.+|++|.++++++++.. ++|+
T Consensus 12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi 91 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999876 56889999999998887654 6899
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+||+||.......+.+.++....+++|+.++..+.+++..+ +.++|++||...+.+. .
T Consensus 92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~-----------------~ 154 (255)
T d1fmca_ 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------------I 154 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------------T
T ss_pred eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-----------------c
Confidence 99999987544455566777899999999999999887643 3368899887544211 1
Q ss_pred CCCChhhhhhHhHhhh
Q 035631 498 FTRSFYSKTKAMVTFL 513 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 155 -~~~~Y~asKaal~~l 169 (255)
T d1fmca_ 155 -NMTSYASSKAAASHL 169 (255)
T ss_dssp -TCHHHHHHHHHHHHH
T ss_pred -ccccchhHHHHHHHH
Confidence 345899999999877
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=2.1e-12 Score=122.20 Aligned_cols=124 Identities=15% Similarity=0.104 Sum_probs=95.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~~~ 433 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|++||+||.....
T Consensus 8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~ 87 (237)
T d1uzma1 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA 87 (237)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC--
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccc
Confidence 489999999999999999999999987 45789999999998887654 689999999976322
Q ss_pred C-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhh
Q 035631 434 N-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTK 507 (684)
Q Consensus 434 ~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK 507 (684)
. .+.+.+.....+++|+.++..+.+++.. .+ .++|++||...+.+.+ ....|+.+|
T Consensus 88 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~------------------~~~~Y~asK 149 (237)
T d1uzma1 88 FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG------------------NQANYAASK 149 (237)
T ss_dssp ---CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHHHH
T ss_pred cHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc------------------ccHHHHHHH
Confidence 2 1334566678999999999988887663 33 3799999985442110 235799999
Q ss_pred HhHhhh
Q 035631 508 AMVTFL 513 (684)
Q Consensus 508 ~~~E~~ 513 (684)
...+.+
T Consensus 150 aal~~l 155 (237)
T d1uzma1 150 AGVIGM 155 (237)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998877
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=5.6e-12 Score=120.85 Aligned_cols=218 Identities=19% Similarity=0.187 Sum_probs=143.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhh-----cc
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLL-----VS 84 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~ 84 (684)
..+|.+|||||++.||.+++++|+++ |++|++.+|+... ...+.. ...........|+.+.+..+... ..
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSG--GEAQAK-KLGNNCVFAPADVTSEKDVQTALALAKGKF 77 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSS--HHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHH--HHHHHH-HhCCCccccccccccccccccccccccccc
Confidence 35689999999999999999999999 8999999997521 111111 11345677888998876654433 12
Q ss_pred CCCCEEEEcCccCCcC----------CCCCChHHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCcccccCC
Q 035631 85 EGIDTIMHFAAQTHVD----------NSFGNSFEFTNNNIYGTHVLLEACKLT---------GQVKRFIHVSTDEVYGET 145 (684)
Q Consensus 85 ~~~d~Vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~i~~SS~~vyg~~ 145 (684)
...|.+++.++..... ...+.+...+++|+.++.++.+++... ....++|++||...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~- 156 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG- 156 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC-
Confidence 4688888887654321 111245567899999999999887432 11358999999776432
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEe
Q 035631 146 DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 146 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (684)
......|+.+|...+.+.+.++.+. ++++..+.||.+..+.. ..+.........+..++.
T Consensus 157 -------------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~--~~~~~~~~~~~~~~~pl~-- 219 (248)
T d2o23a1 157 -------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL--TSLPEKVCNFLASQVPFP-- 219 (248)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSS--
T ss_pred -------------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh--hcCCHHHHHHHHhcCCCC--
Confidence 1223579999999999999888774 78999999999865532 112222222222222110
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcCC-CCcEEEe
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRGV-IGHVYNV 256 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~ni 256 (684)
.-+...+|+|++++.+++.+. .|++.+|
T Consensus 220 ------~R~g~peevA~~v~fL~s~~~itGq~I~v 248 (248)
T d2o23a1 220 ------SRLGDPAEYAHLVQAIIENPFLNGEVIRL 248 (248)
T ss_dssp ------CSCBCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred ------CCCcCHHHHHHHHHHHHhCCCCCceEeEC
Confidence 124578999999999887542 4555543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.35 E-value=4.3e-12 Score=120.35 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=97.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||.++++.|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilin 86 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVN 86 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 489999999999999999999999977 66789999999998887654 6899999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----c-CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----K-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||....... +...+.....+++|+.++..+.+++.. . +.++|++||...+.+. . .
T Consensus 87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----------------~-~ 148 (244)
T d1nffa_ 87 NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------------V-A 148 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------------T-T
T ss_pred CCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-----------------c-c
Confidence 9997622111 334466678999999999999987753 2 3479999998544211 1 2
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...+.+.
T Consensus 149 ~~~Y~asKaal~~lt 163 (244)
T d1nffa_ 149 CHGYTATKFAVRGLT 163 (244)
T ss_dssp BHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHH
Confidence 357999999998773
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.33 E-value=7.2e-12 Score=119.56 Aligned_cols=124 Identities=13% Similarity=0.047 Sum_probs=98.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||.++++.|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 85 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN 85 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEe
Confidence 489999999999999999999999976 67889999999999888754 6899999
Q ss_pred cceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----c-CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----K-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
+||...... .+...+.....+++|+.++..+.+++.. . +.++|++||...+.+ .. .
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-----------------~~-~ 147 (254)
T d1hdca_ 86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------------LA-L 147 (254)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------CT-T
T ss_pred cCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-----------------cc-c
Confidence 999773222 2333456678999999999999998864 2 347999999854321 11 3
Q ss_pred CChhhhhhHhHhhh
Q 035631 500 RSFYSKTKAMVTFL 513 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~ 513 (684)
...|+.+|...+.+
T Consensus 148 ~~~Y~asKaal~~l 161 (254)
T d1hdca_ 148 TSSYGASKWGVRGL 161 (254)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH
Confidence 35899999999877
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=3.2e-12 Score=121.47 Aligned_cols=125 Identities=16% Similarity=0.139 Sum_probs=99.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
++++||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|++||
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 84 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVN 84 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehh
Confidence 489999999999999999999999977 56789999999998887754 6899999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
.|+....... +...+.....+++|+.++..+.+++... + .++|++||...+.+.+ .
T Consensus 85 nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~------------------~ 146 (243)
T d1q7ba_ 85 NAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG------------------G 146 (243)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------------T
T ss_pred hhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC------------------C
Confidence 9987732222 3344666789999999999999988642 3 4799999986542111 2
Q ss_pred CChhhhhhHhHhhhh
Q 035631 500 RSFYSKTKAMVTFLS 514 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~ 514 (684)
...|+.+|...+.+.
T Consensus 147 ~~~Y~asKaal~~lt 161 (243)
T d1q7ba_ 147 QANYAAAKAGLIGFS 161 (243)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 357999999998773
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4.3e-12 Score=120.90 Aligned_cols=124 Identities=18% Similarity=0.147 Sum_probs=98.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~ 426 (684)
+++|||||++-||.++++.|+++|++| .++.+|++|.++++++++.. ++|++||.
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnn 86 (250)
T d1ydea1 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNN 86 (250)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEec
Confidence 489999999999999999999999976 67889999999999887754 68999999
Q ss_pred ceecCCCC-c-cccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 427 AGITGRPN-V-DWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 427 a~~~~~~~-~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
||....+. . +...++....+++|+.++..+.+++.. .+-++|++||...+-+. . ..
T Consensus 87 AG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~-----------------~-~~ 148 (250)
T d1ydea1 87 AGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------------A-QA 148 (250)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------------T-TC
T ss_pred ccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc-----------------c-Cc
Confidence 99652222 2 334466778999999999999998874 34579999998654211 1 33
Q ss_pred ChhhhhhHhHhhh
Q 035631 501 SFYSKTKAMVTFL 513 (684)
Q Consensus 501 ~~Y~~sK~~~E~~ 513 (684)
..|+.+|...+.+
T Consensus 149 ~~Y~asKaal~~l 161 (250)
T d1ydea1 149 VPYVATKGAVTAM 161 (250)
T ss_dssp HHHHHHHHHHHHH
T ss_pred chhHHHHhhHHHH
Confidence 6899999999877
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.32 E-value=5e-12 Score=120.01 Aligned_cols=123 Identities=20% Similarity=0.137 Sum_probs=95.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a 427 (684)
+++|||||++-||..+++.|+++|++| .++.+|++|.++++++++.. ++|++||+|
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 85 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA 85 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECC
Confidence 479999999999999999999999987 67889999999999887765 689999999
Q ss_pred eecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----CC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCC
Q 035631 428 GITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRS 501 (684)
Q Consensus 428 ~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~ 501 (684)
|...... .+.+.+.....+++|+.++..+.+++... +. .++++||+...+ .. ...
T Consensus 86 G~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~------------------~~-~~~ 146 (242)
T d1ulsa_ 86 GITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------------NL-GQA 146 (242)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------------CT-TCH
T ss_pred cccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC------------------CC-CCc
Confidence 9763222 23445667789999999999999988753 22 355555542221 11 346
Q ss_pred hhhhhhHhHhhh
Q 035631 502 FYSKTKAMVTFL 513 (684)
Q Consensus 502 ~Y~~sK~~~E~~ 513 (684)
.|+.+|...+.+
T Consensus 147 ~Y~asKaal~~l 158 (242)
T d1ulsa_ 147 NYAASMAGVVGL 158 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 799999998877
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=1.5e-11 Score=118.68 Aligned_cols=225 Identities=14% Similarity=0.085 Sum_probs=149.2
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC-CCCCCCceEEEecCCCHHHHHHhhc---
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP-SRASPNFKFLKGDITCADLMNYLLV--- 83 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--- 83 (684)
+.+|+||||||+| -||+++++.|+++ |++|++.+|++.... .+.. .........+..|+.+..+....+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKG--RVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHH--HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHH--HHHHHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence 3578999999998 7999999999999 899999999743111 1110 1112356777889988776554432
Q ss_pred --cCCCCEEEEcCccCCcCCCCC---------ChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCC
Q 035631 84 --SEGIDTIMHFAAQTHVDNSFG---------NSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 84 --~~~~d~Vih~a~~~~~~~~~~---------~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
....|++||.++......... .....+..|+.+...+.+++... .+-..+|++||.....
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-------- 150 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-------- 150 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc--------
Confidence 236899999998764332211 12335577777888888777643 1235688888865421
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRSY---GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
+......|+.+|...+.+.+.++.++ ++++..++||.|..+.......-...........++.
T Consensus 151 ------~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~-------- 216 (258)
T d1qsga_ 151 ------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR-------- 216 (258)
T ss_dssp ------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--------
T ss_pred ------CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC--------
Confidence 11223579999999999998888774 6899999999998764321122223333333222211
Q ss_pred EecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
-+...+|+|.++..++.+. ..++++.+-+|-.
T Consensus 217 -R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 217 -RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp -SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 2456899999999999543 3678888877743
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.31 E-value=3.2e-12 Score=122.72 Aligned_cols=124 Identities=19% Similarity=0.124 Sum_probs=97.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||.++++.|+++|++| ..+.+|++|.++++++++.. ++|++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVn 85 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVN 85 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEe
Confidence 489999999999999999999999976 56789999999999887764 6899999
Q ss_pred cceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----c--CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 426 AAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----K--NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 426 ~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
.||..... ..+.+.+.....+++|+.++..+.+++.. . +.++|++||...+-+ ..
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------------~~- 147 (256)
T d1k2wa_ 86 NAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-----------------EA- 147 (256)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------CT-
T ss_pred ecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----------------cc-
Confidence 99976321 22334566678999999999999987553 2 247999999854421 11
Q ss_pred CCChhhhhhHhHhhh
Q 035631 499 TRSFYSKTKAMVTFL 513 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 148 ~~~~Y~asKaal~~l 162 (256)
T d1k2wa_ 148 LVGVYCATKAAVISL 162 (256)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred cccchhhhhhHHHHH
Confidence 235799999999877
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.31 E-value=7.5e-12 Score=119.26 Aligned_cols=124 Identities=17% Similarity=0.090 Sum_probs=97.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-----CCCeEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVL 424 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vi 424 (684)
+.+|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|++|
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilV 85 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILV 85 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 489999999999999999999999976 57889999999998887654 689999
Q ss_pred EcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 425 NAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 425 h~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|.||...... .+.+.+.....+++|+.++..+.+++.. .+ .++|++||.....+ ..
T Consensus 86 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------------~~- 147 (247)
T d2ew8a1 86 NNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------------IE- 147 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------------CS-
T ss_pred ECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-----------------Cc-
Confidence 9999762212 2344567779999999999999998864 23 47999999854321 11
Q ss_pred CCChhhhhhHhHhhh
Q 035631 499 TRSFYSKTKAMVTFL 513 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 148 ~~~~Y~asKaal~~l 162 (247)
T d2ew8a1 148 AYTHYISTKAANIGF 162 (247)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred ccccchhhhccHHHH
Confidence 235799999998877
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.31 E-value=7.7e-12 Score=118.70 Aligned_cols=124 Identities=17% Similarity=0.132 Sum_probs=97.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~ 430 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.+ ++|++||+||..
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~ 85 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV 85 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccc
Confidence 589999999999999999999999987 56788999999999999876 689999999976
Q ss_pred CCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 431 GRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 431 ~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
.... .+.+.+.....+++|+.++..+.+++.. .+ -++|++||...+.+. + ....|
T Consensus 86 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------------~--~~~~Y 147 (242)
T d1cyda_ 86 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF----------------P--NLITY 147 (242)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------------T--TBHHH
T ss_pred cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC----------------C--ccccc
Confidence 3212 2334556678899999999999887653 22 369999887543211 0 23579
Q ss_pred hhhhHhHhhh
Q 035631 504 SKTKAMVTFL 513 (684)
Q Consensus 504 ~~sK~~~E~~ 513 (684)
+.+|...+.+
T Consensus 148 ~asKaal~~l 157 (242)
T d1cyda_ 148 SSTKGAMTML 157 (242)
T ss_dssp HHHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 9999999877
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2e-12 Score=125.95 Aligned_cols=184 Identities=16% Similarity=0.106 Sum_probs=123.6
Q ss_pred CCEE-EEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCCCCCCceEEEecCCCHHHHHHhhcc----
Q 035631 12 PKKI-LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSRASPNFKFLKGDITCADLMNYLLVS---- 84 (684)
Q Consensus 12 ~~~V-lItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 84 (684)
+|+| |||||++-||.++++.|++++ |.+|++.+|+..... ...+. ....++.++.+|+.|.+++.+++..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQ--AEGLSPRFHQLDIDDLQSIRALRDFLRKE 78 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHH--HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHH--hcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence 4566 999999999999999999863 789999999753211 11111 1234688999999999987765422
Q ss_pred -CCCCEEEEcCccCCcCCCCC----ChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCC-C--------
Q 035631 85 -EGIDTIMHFAAQTHVDNSFG----NSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDME-S-------- 149 (684)
Q Consensus 85 -~~~d~Vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~-~-------- 149 (684)
.++|++||.||........+ +....+++|+.++..+.+++... ..-.++|++||.......... +
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence 37999999999865433333 23457899999999999888642 113589999996543110000 0
Q ss_pred C------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-------cCCCEEEEeeCceeCC
Q 035631 150 D------------------IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-------YGLPTITTRGNNVYGP 198 (684)
Q Consensus 150 ~------------------~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~G~ 198 (684)
. .......+..+...|+.+|.....+.+.++.+ .++.+..+.||+|--+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~ 232 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence 0 00001123345568999999888776554433 2788999999998644
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.29 E-value=6.6e-12 Score=119.96 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=98.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+.+|||||++-||..+++.|+++|++| ..+.+|++|.+++.++++.. ++|+
T Consensus 11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 90 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 90 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence 489999999999999999999999876 66889999999998888765 7899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||.|+...... .+...+.....+++|+.++..+.+++.. .+ -++|++||...+.+. +
T Consensus 91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~---------------~- 154 (251)
T d2c07a1 91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------V- 154 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------T-
T ss_pred eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC---------------C-
Confidence 999998763222 1233456678999999999999998763 23 479999998544211 0
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 155 --~~~~Y~asKaal~~lt 170 (251)
T d2c07a1 155 --GQANYSSSKAGVIGFT 170 (251)
T ss_dssp --TCHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHH
Confidence 2357999999998773
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.29 E-value=1.2e-11 Score=118.64 Aligned_cols=123 Identities=16% Similarity=0.121 Sum_probs=94.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
.+|||||++-||..+++.|+++|++| ..+.+|++|.+++.++++.. ++|++
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 82 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 35999999999999999999999876 56789999999998887654 68999
Q ss_pred EEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||.||....... +.+.+.....+++|+.++.++++++.. .+ .++|++||...+.+ .
T Consensus 83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----------------~ 145 (255)
T d1gega_ 83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------------N 145 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------C
T ss_pred EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-----------------C
Confidence 999997622111 334456678999999999999988653 22 35888888754321 1
Q ss_pred CCCCChhhhhhHhHhhh
Q 035631 497 NFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~ 513 (684)
. ....|+.+|...+.+
T Consensus 146 ~-~~~~Y~asKaal~~l 161 (255)
T d1gega_ 146 P-ELAVYSSSKFAVRGL 161 (255)
T ss_dssp T-TBHHHHHHHHHHHHH
T ss_pred c-ccccchhCHHHHHhh
Confidence 1 335799999998877
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.29 E-value=1e-11 Score=118.99 Aligned_cols=203 Identities=15% Similarity=0.110 Sum_probs=129.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 84 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 84 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 489999999999999999999999876 46788999999998887654 68
Q ss_pred CeEEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 421 THVLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 421 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
|++||.||.... +-.+.+.+.....+++|+.++..+.+++... +.++|++||...+-+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-------------- 150 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI-------------- 150 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC--------------
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC--------------
Confidence 999999996522 1123345667789999999999999987532 3479999998543210
Q ss_pred CCCCCCCChhhhhhHhHhhhhhH---H--hhhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLSYL---E--IFVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLAR 568 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 568 (684)
. ....|+.+|...+.+... | .++..+....|..+.++......... .......+...+..
T Consensus 151 ---~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~-----------~~~~~~~~~~~~~~ 215 (258)
T d1iy8a_ 151 ---G-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQL-----------DPENPRKAAEEFIQ 215 (258)
T ss_dssp ---S-SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHH-----------CTTCHHHHHHHHHT
T ss_pred ---C-CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhc-----------CcccHHHHHHHHHh
Confidence 0 346799999998877322 2 22233333444333222111111100 00011111111110
Q ss_pred cccccccC-CCccchhhHHHHHHHHHhcC---ccc-eeEecCCCc
Q 035631 569 YNKVVNIP-NSMTVLDEMLPIAIEMARRN---CRG-AWNFTNPGV 608 (684)
Q Consensus 569 ~~~~~~~~-~~~i~v~D~~~~~~~~~~~~---~~g-~~ni~~~~~ 608 (684)
..| .-+...+|+|.++++++... ..| .+.+.+|..
T Consensus 216 -----~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 216 -----VNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp -----TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred -----cCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 011 13478899999999998643 344 788877654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=9.5e-12 Score=118.31 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=97.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~ 430 (684)
+++|||||++-||.++++.|+++|++| ..+.+|++|.++++++++.+ ++|++||.|+..
T Consensus 8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~ 87 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVA 87 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccc
Confidence 489999999999999999999999987 56788999999999999876 689999999876
Q ss_pred CCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChh
Q 035631 431 GRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFY 503 (684)
Q Consensus 431 ~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y 503 (684)
.... .+.+.+.....+++|+.++..+.+++.. .+ .++|++||...+.+ .. ....|
T Consensus 88 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------------~~-~~~~Y 149 (244)
T d1pr9a_ 88 LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------------VT-NHSVY 149 (244)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CT-TBHHH
T ss_pred cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----------------cc-chhhh
Confidence 2221 1334566678999999999999887764 12 36999998754321 11 23579
Q ss_pred hhhhHhHhhh
Q 035631 504 SKTKAMVTFL 513 (684)
Q Consensus 504 ~~sK~~~E~~ 513 (684)
+.+|...+.+
T Consensus 150 ~asKaal~~l 159 (244)
T d1pr9a_ 150 CSTKGALDML 159 (244)
T ss_dssp HHHHHHHHHH
T ss_pred hhhHHHHHHH
Confidence 9999999877
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.29 E-value=1.4e-11 Score=117.63 Aligned_cols=125 Identities=18% Similarity=0.150 Sum_probs=97.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|
T Consensus 6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 85 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 85 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999976 56789999999998887754 689
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||..... -.+.+.+.....+++|+.++..+.+++... + .++|++||+.... .
T Consensus 86 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~-----------------~ 148 (251)
T d1vl8a_ 86 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------------V 148 (251)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------------C
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc-----------------c
Confidence 999999976221 123345666789999999999999988752 2 3799998864321 0
Q ss_pred CCCCCChhhhhhHhHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~ 513 (684)
+......|+.+|...+.+
T Consensus 149 ~~~~~~~Y~asKaal~~l 166 (251)
T d1vl8a_ 149 TMPNISAYAASKGGVASL 166 (251)
T ss_dssp CSSSCHHHHHHHHHHHHH
T ss_pred cCccccchHHHHHhHHHH
Confidence 110235799999999877
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.28 E-value=5.5e-12 Score=121.49 Aligned_cols=125 Identities=15% Similarity=0.131 Sum_probs=98.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||++-||..+++.|+++|++| .++.+|++|.++++++++.. ++
T Consensus 5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 84 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 479999999999999999999999876 56789999999999888764 68
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
|++||.||....... +...+.....+++|+.++..+.+++... + -++|++||...+.+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~--------------- 149 (260)
T d1x1ta1 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS--------------- 149 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------
T ss_pred cEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc---------------
Confidence 999999997732222 3345667799999999999988887642 3 479999998544211
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 150 --~-~~~~Y~asKaal~~lt 166 (260)
T d1x1ta1 150 --A-NKSAYVAAKHGVVGFT 166 (260)
T ss_dssp --T-TCHHHHHHHHHHHHHH
T ss_pred --C-CcchhhhhhhhHHHhH
Confidence 1 3357999999998773
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.28 E-value=1.1e-11 Score=118.89 Aligned_cols=124 Identities=13% Similarity=0.133 Sum_probs=96.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||.++++.|+++|++| ..+.+|++|.++++++++.. ++|
T Consensus 8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD 87 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 489999999999999999999999876 56889999999998887654 689
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||.||...... .+.+.++....+++|+.++..+.+++.. .+ ..+|++||...+.
T Consensus 88 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~----------------- 150 (261)
T d1geea_ 88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----------------- 150 (261)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------------
T ss_pred EeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-----------------
Confidence 9999999763222 2344566678999999999999888764 23 2488888874331
Q ss_pred CCCCCCChhhhhhHhHhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~ 513 (684)
+..-...|+.+|...+.+
T Consensus 151 -~~~~~~~Y~asKaal~~l 168 (261)
T d1geea_ 151 -PWPLFVHYAASKGGMKLM 168 (261)
T ss_dssp -CCTTCHHHHHHHHHHHHH
T ss_pred -cCccccccccCCccchhh
Confidence 110235799999999877
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.28 E-value=1.1e-11 Score=117.68 Aligned_cols=200 Identities=14% Similarity=0.125 Sum_probs=130.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHH-------HhhccC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMN-------YLLVSE 85 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~-------~~~~~~ 85 (684)
.|||||||+|.||.++++.|+++ |++|++++|+.... ......+.+|..+.+... ..+...
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999 89999999975211 111223345555443322 222235
Q ss_pred CCCEEEEcCccCCc-CCCCC----ChHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCC
Q 035631 86 GIDTIMHFAAQTHV-DNSFG----NSFEFTNNNIYGTHVLLEACKLT-GQVKRFIHVSTDEVYGETDMESDIGNPEASQL 159 (684)
Q Consensus 86 ~~d~Vih~a~~~~~-~~~~~----~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~ 159 (684)
++|++||+||.... ..... ..+..+++|+.++..+.+++... ..-.++|++||...+...
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~-------------- 136 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-------------- 136 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc--------------
Confidence 68999999996432 11122 24456899999988888777642 113689999997654322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceEecccH
Q 035631 160 LPTNPYSATKAGAEMLVMAYHRSY-----GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234 (684)
Q Consensus 160 ~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 234 (684)
.....|+.+|+..+.+.+.++.++ ++++..+.|+.+--+ +.+...... ....++..
T Consensus 137 ~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~----------~~~~~~~~~---------~~~~~~~~ 197 (235)
T d1ooea_ 137 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------MNRKWMPNA---------DHSSWTPL 197 (235)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH----------HHHHHSTTC---------CGGGCBCH
T ss_pred ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc----------chhhhCcCC---------ccccCCCH
Confidence 123579999999999999887653 556777899876322 122221111 11245778
Q ss_pred HHHHHHHHHHHhcC----CCCcEEEec
Q 035631 235 ADVAEAFDVILHRG----VIGHVYNVG 257 (684)
Q Consensus 235 ~D~a~~i~~~~~~~----~~~~~~ni~ 257 (684)
+|+++.++..+..+ ..+..+.+.
T Consensus 198 ~~va~~~~~~l~~~~~~~~tG~~i~v~ 224 (235)
T d1ooea_ 198 SFISEHLLKWTTETSSRPSSGALLKIT 224 (235)
T ss_dssp HHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCccccCCCceEEEEE
Confidence 99999987666432 346666663
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=1e-11 Score=120.24 Aligned_cols=207 Identities=15% Similarity=0.110 Sum_probs=138.7
Q ss_pred CCCCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHH
Q 035631 4 EFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 4 ~~~~~~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
.+.|....+|++|||||++.||+++++.|+++ |++|++++|+.. .+..+.. .........+.+|+.+.+....
T Consensus 6 ~f~~~~L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~--~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 81 (269)
T d1xu9a_ 6 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKE--TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQ 81 (269)
T ss_dssp CCCGGGGTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHH
T ss_pred cCCccccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHhhhhcccchhhhhhhhhHHHHHH
Confidence 34444567799999999999999999999999 899999999742 2222111 1123456778889988777655
Q ss_pred hhcc-----CCCCEEEEcCccCCcCCCC----CChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCC
Q 035631 81 LLVS-----EGIDTIMHFAAQTHVDNSF----GNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDM 147 (684)
Q Consensus 81 ~~~~-----~~~d~Vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~ 147 (684)
.... ...|+++|.|+........ ++....+++|+.++..+.+++. +.+ .++|++||...+-.
T Consensus 82 ~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~--- 156 (269)
T d1xu9a_ 82 FVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVA--- 156 (269)
T ss_dssp HHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSC---
T ss_pred HHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCC---
Confidence 4321 4789999999976543322 2344578899988888777664 323 68999998765321
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEe
Q 035631 148 ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-----YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH 222 (684)
Q Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (684)
......|+.||+..+.+.+.++.+ .++++..+.||.|-.+ +......+.
T Consensus 157 -----------~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~----------~~~~~~~~~----- 210 (269)
T d1xu9a_ 157 -----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE----------TAMKAVSGI----- 210 (269)
T ss_dssp -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------HHHHHSCGG-----
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc----------HHHHhccCC-----
Confidence 122357999999999998888655 3577888999987421 111111111
Q ss_pred cCCCceEecccHHHHHHHHHHHHhcCC
Q 035631 223 GNGSNVRSYLYCADVAEAFDVILHRGV 249 (684)
Q Consensus 223 ~~~~~~~~~i~~~D~a~~i~~~~~~~~ 249 (684)
........+++|+.++..+....
T Consensus 211 ----~~~~~~~~e~~a~~i~~~~~~~~ 233 (269)
T d1xu9a_ 211 ----VHMQAAPKEECALEIIKGGALRQ 233 (269)
T ss_dssp ----GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred ----ccccCCCHHHHHHHHHHHhhcCC
Confidence 11123557888888887765433
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.28 E-value=1.1e-11 Score=119.00 Aligned_cols=124 Identities=17% Similarity=0.122 Sum_probs=90.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc------CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV------RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~------~~d 421 (684)
+++|||||++-||..+++.|+++|++| ..+.+|+++.+++.++++.. ++|
T Consensus 9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 88 (259)
T d1xq1a_ 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 88 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence 489999999999999999999999876 56789999999988776532 589
Q ss_pred eEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+||..... -.+...++....+++|+.++..+.+++.. .+ .++|++||....-+
T Consensus 89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------------- 151 (259)
T d1xq1a_ 89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----------------- 151 (259)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------
T ss_pred cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc-----------------
Confidence 999999976211 12334566778999999999999988764 23 47999999754321
Q ss_pred CCCCCChhhhhhHhHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~ 513 (684)
.. ....|+.+|...+.+
T Consensus 152 ~~-~~~~Y~asKaal~~l 168 (259)
T d1xq1a_ 152 AS-VGSIYSATKGALNQL 168 (259)
T ss_dssp ----CCHHHHHHHHHHHH
T ss_pred cc-ccccccccccchhhh
Confidence 11 346799999999877
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.27 E-value=8.8e-12 Score=118.46 Aligned_cols=123 Identities=20% Similarity=0.147 Sum_probs=97.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
-+|||||++-||..+++.|+++|++| .++.+|++|.++++++++.. ++|+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 68999999999999999999999876 56789999999998887754 6899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||.|+...... .+.+.+..+..+++|+.++..+.+++... +.++|++||...+-+.+
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---------------- 146 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI---------------- 146 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------------
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC----------------
Confidence 999999773222 23445667789999999999999888642 34799999986542111
Q ss_pred CCCCChhhhhhHhHhhh
Q 035631 497 NFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 147 --~~~~Y~asKaal~~l 161 (244)
T d1edoa_ 147 --GQANYAAAKAGVIGF 161 (244)
T ss_dssp --TCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHC
Confidence 235799999999877
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.27 E-value=1.1e-11 Score=118.85 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=96.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHh----c--CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKR----V--RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~----~--~~d 421 (684)
+++|||||++-||.++++.|+++|++| .++.+|+++.++++++++. . .+|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id 86 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 86 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence 489999999999999999999999976 5678999999998777643 2 478
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||+|+...... .+...++....+++|+.++..+.+++... +.++|++||.....+.
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~---------------- 150 (258)
T d1ae1a_ 87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------------- 150 (258)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------------
T ss_pred EEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----------------
Confidence 9999999772111 12345667799999999999999887632 2379999998554211
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
. -...|+.+|...+.+.
T Consensus 151 -~-~~~~Y~~sK~al~~lt 167 (258)
T d1ae1a_ 151 -P-SVSLYSASKGAINQMT 167 (258)
T ss_dssp -T-TCHHHHHHHHHHHHHH
T ss_pred -c-cchhHHHHHHHHHHHH
Confidence 1 2357999999998773
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.26 E-value=9.7e-11 Score=111.67 Aligned_cols=211 Identities=18% Similarity=0.210 Sum_probs=141.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhh----ccCCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLL----VSEGID 88 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~~~d 88 (684)
|++|||||++.||+++++.|+++ |++|++.+|+.. .......++|+.+......+. .....+
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence 78999999999999999999999 899999999641 134567789998876654443 224556
Q ss_pred EEEEcCccCCcC--------CCCCChHHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCcccccCCCCCCCC
Q 035631 89 TIMHFAAQTHVD--------NSFGNSFEFTNNNIYGTHVLLEACKLT---------GQVKRFIHVSTDEVYGETDMESDI 151 (684)
Q Consensus 89 ~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~i~~SS~~vyg~~~~~~~~ 151 (684)
.+++.++..... ...+.....+++|+.+...+...+... ....++|++||...+-..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~------ 141 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------ 141 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC------
Confidence 666666543211 111234457788888888777666432 124689999997664321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCce
Q 035631 152 GNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV 228 (684)
Q Consensus 152 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (684)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+... ..............++.
T Consensus 142 --------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~~-------- 203 (241)
T d1uaya_ 142 --------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ--GLPEKAKASLAAQVPFP-------- 203 (241)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--TSCHHHHHHHHTTCCSS--------
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc--hhhhhHHHHHHhcCCCC--------
Confidence 12357999999999999888876 4899999999998654211 11122222222322210
Q ss_pred EecccHHHHHHHHHHHHhcC-CCCcEEEecCCCc
Q 035631 229 RSYLYCADVAEAFDVILHRG-VIGHVYNVGTKKE 261 (684)
Q Consensus 229 ~~~i~~~D~a~~i~~~~~~~-~~~~~~ni~~~~~ 261 (684)
.-+...+|+|+++..++... ..|+++.+-+|-.
T Consensus 204 ~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 204 PRLGRPEEYAALVLHILENPMLNGEVVRLDGALR 237 (241)
T ss_dssp CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence 12356899999999988754 3578888876643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.26 E-value=2.2e-11 Score=116.39 Aligned_cols=125 Identities=17% Similarity=0.084 Sum_probs=98.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||..+++.|+++|++| .++.+|++|.++++++++.. ++|++||
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVn 86 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN 86 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 489999999999999999999999977 56789999999998887765 6899999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCC
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTR 500 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~ 500 (684)
.||....... +.+.+.....+++|+.++..+++++.. .+-++|++||...+- +.. ..
T Consensus 87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-----------------~~~-~~ 148 (253)
T d1hxha_ 87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-----------------PIE-QY 148 (253)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------------CCT-TB
T ss_pred cccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-----------------Ccc-cc
Confidence 9997632221 334566678999999999999888875 344799999985431 111 33
Q ss_pred ChhhhhhHhHhhhh
Q 035631 501 SFYSKTKAMVTFLS 514 (684)
Q Consensus 501 ~~Y~~sK~~~E~~~ 514 (684)
..|+.+|...+.+.
T Consensus 149 ~~Y~asKaal~~lt 162 (253)
T d1hxha_ 149 AGYSASKAAVSALT 162 (253)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHH
Confidence 57999999888773
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.25 E-value=1.2e-11 Score=118.15 Aligned_cols=125 Identities=16% Similarity=0.144 Sum_probs=96.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||++-||.++++.|+++|++| .++.+|++|.++++++++.. ++|++
T Consensus 7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 86 (251)
T d1zk4a1 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEE
Confidence 489999999999999999999999976 67889999999998887754 68999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC--CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
||.|+...... .+.+.+.....+++|+.++..+.+++.. .+ .++|++||...+-+ .
T Consensus 87 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-----------------~ 149 (251)
T d1zk4a1 87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----------------D 149 (251)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------------C
T ss_pred EeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----------------C
Confidence 99999762211 2334455668999999999999998764 22 36899998744310 0
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
. ....|+.+|...+.+.
T Consensus 150 ~-~~~~Y~asKaal~~lt 166 (251)
T d1zk4a1 150 P-SLGAYNASKGAVRIMS 166 (251)
T ss_dssp T-TCHHHHHHHHHHHHHH
T ss_pred C-CchhHHHHHHHHhcch
Confidence 0 2357999999988763
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.24 E-value=6.1e-11 Score=113.69 Aligned_cols=125 Identities=16% Similarity=0.100 Sum_probs=96.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc------CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV------RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~------~~d 421 (684)
+++|||||++-||.++++.|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id 88 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 88 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence 489999999999999999999999976 56789999999988776532 589
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
++||.||...... .+.+.+.....+++|+.++..+.+++... + -++|++||..... +
T Consensus 89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------------~ 151 (259)
T d2ae2a_ 89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------------A 151 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------------C
T ss_pred EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-----------------c
Confidence 9999999762222 23445666789999999999999887642 2 3799999974431 1
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. -...|+.+|...+.+.
T Consensus 152 ~~-~~~~Y~asKaal~~lt 169 (259)
T d2ae2a_ 152 VP-YEAVYGATKGAMDQLT 169 (259)
T ss_dssp CT-TCHHHHHHHHHHHHHH
T ss_pred cc-cccchHHHHHHHHHHH
Confidence 11 2357999999988773
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.24 E-value=1.8e-11 Score=117.54 Aligned_cols=123 Identities=17% Similarity=0.154 Sum_probs=96.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
.+|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|++
T Consensus 4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (257)
T d2rhca1 4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL 83 (257)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56999999999999999999999876 66889999999998887654 68999
Q ss_pred EEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHHc------C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 424 LNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKEK------N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 424 ih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
||+||...... .+.+.+.....+++|+.++..+.+++..+ + .++|++||...+.+.+
T Consensus 84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~--------------- 148 (257)
T d2rhca1 84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV--------------- 148 (257)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT---------------
T ss_pred EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc---------------
Confidence 99999773222 23445667799999999999999988642 2 3688888875442110
Q ss_pred CCCCCChhhhhhHhHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 149 ---~~~~Y~asKaal~~l 163 (257)
T d2rhca1 149 ---HAAPYSASKHGVVGF 163 (257)
T ss_dssp ---TCHHHHHHHHHHHHH
T ss_pred ---cchhHHHHHHHHHHH
Confidence 235799999998877
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.22 E-value=1.5e-11 Score=118.20 Aligned_cols=124 Identities=18% Similarity=0.226 Sum_probs=98.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. ++|+
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 85 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence 489999999999999999999999976 57889999999998887754 6899
Q ss_pred EEEcceecCC--CCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 423 VLNAAGITGR--PNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 423 Vih~a~~~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
+||.||.... +-.+.+.+.....+++|+.++..+.+++... +.++|++||...+.+.+
T Consensus 86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~--------------- 150 (260)
T d1zema1 86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP--------------- 150 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT---------------
T ss_pred ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc---------------
Confidence 9999996521 2223455667789999999999999988642 23799999986542111
Q ss_pred CCCCCChhhhhhHhHhhh
Q 035631 496 PNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~ 513 (684)
-...|+.+|...+.+
T Consensus 151 ---~~~~Y~asKaal~~l 165 (260)
T d1zema1 151 ---NMAAYGTSKGAIIAL 165 (260)
T ss_dssp ---TBHHHHHHHHHHHHH
T ss_pred ---chHHHHHHHHHHHHH
Confidence 235799999999877
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=4.4e-11 Score=113.71 Aligned_cols=126 Identities=18% Similarity=0.130 Sum_probs=94.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~ 431 (684)
+++|||||++-||.++++.|+++|++| .....|+.+.+.++.....+ ++|++||+||...
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~ 86 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH 86 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccccC
Confidence 479999999999999999999999987 45667777777777766654 5899999999772
Q ss_pred CCC-ccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 432 RPN-VDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 432 ~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
... .+.+.+.....+++|+.++..+.+++... +.++|++||...- ..+.. ....|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------------~~~~~-~~~~Y~~ 149 (245)
T d2ag5a1 87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------------VKGVV-NRCVYST 149 (245)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------------TBCCT-TBHHHHH
T ss_pred CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------------cCCcc-chhHHHH
Confidence 211 23345567789999999999999988742 2379999886310 00111 4467999
Q ss_pred hhHhHhhhh
Q 035631 506 TKAMVTFLS 514 (684)
Q Consensus 506 sK~~~E~~~ 514 (684)
+|...+.+.
T Consensus 150 sKaal~~l~ 158 (245)
T d2ag5a1 150 TKAAVIGLT 158 (245)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998773
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.21 E-value=4.1e-11 Score=116.31 Aligned_cols=226 Identities=12% Similarity=0.043 Sum_probs=140.2
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhc----
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLV---- 83 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 83 (684)
+.+|+||||||+| .||.++++.|+++ |.+|+..+|+... ..+.+.. ........+++|+.+.+....+++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~-~~~~~~~-~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLR-LIQRITD-RLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHH-HHHHHHT-TSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHH-HHHHHHH-HcCCceeeEeeecccccccccccchhhh
Confidence 4578999999765 4999999999999 8999999886421 1111211 234467788999999876544421
Q ss_pred ---c-CCCCEEEEcCccCCcC---------CCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccCCCCCCC
Q 035631 84 ---S-EGIDTIMHFAAQTHVD---------NSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESD 150 (684)
Q Consensus 84 ---~-~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~~~~~~~ 150 (684)
. ...|+++|+++..... ..+......+..|..........+.........+.++|.....
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~------- 152 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR------- 152 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-------
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc-------
Confidence 1 3589999999965321 1112233455666666666666665543223444444433221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC--------CCC--CChHHHHHHHHHcCC
Q 035631 151 IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPN--------QFP--EKLIPKFILLAMKGQ 217 (684)
Q Consensus 151 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~--------~~~--~~~~~~~~~~~~~~~ 217 (684)
+......|+.+|...+.+.+.++.+ +++++..+.||.+-.+. ... ......+.....+.-
T Consensus 153 -------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (268)
T d2h7ma1 153 -------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA 225 (268)
T ss_dssp -------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred -------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC
Confidence 1122357999999999999888766 37999999999886431 100 011122222222222
Q ss_pred ceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 218 QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 218 ~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
|+. +.+...+|+|+++..++... ..|+++.+-+|..
T Consensus 226 pl~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 226 PIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp TTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred CCC--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence 211 23455799999999999643 2577888877754
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.21 E-value=1.1e-10 Score=113.54 Aligned_cols=224 Identities=15% Similarity=0.020 Sum_probs=139.1
Q ss_pred CCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCcccc-cccCCCCCCCCCceEEEecCCCHHHHHHhhc---
Q 035631 10 YKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFKFLKGDITCADLMNYLLV--- 83 (684)
Q Consensus 10 ~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 83 (684)
+.+|++|||||+| -||.++++.|+++ |++|++.+|+..... ...+. .......+..+|+.+.+....++.
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~--~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIA--QELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHH--HHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--hhCCceeEeeecccchhhHHHHHHHHH
Confidence 4579999999988 6999999999999 999999999743111 11111 113456778999999888665542
Q ss_pred --cCCCCEEEEcCccCCcCCCC-----CChHHHHHHHH---HHHHHHHHHHHhcCCC-cEEEEEeCcccccCCCCCCCCC
Q 035631 84 --SEGIDTIMHFAAQTHVDNSF-----GNSFEFTNNNI---YGTHVLLEACKLTGQV-KRFIHVSTDEVYGETDMESDIG 152 (684)
Q Consensus 84 --~~~~d~Vih~a~~~~~~~~~-----~~~~~~~~~n~---~~~~~ll~~~~~~~~~-~~~i~~SS~~vyg~~~~~~~~~ 152 (684)
...+|++||+++........ .........+. .....+.....+.... ..++.+|+....+.
T Consensus 79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-------- 150 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-------- 150 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------
T ss_pred HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc--------
Confidence 13799999999975432111 22222222222 2333344433332222 34555555443321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecCCCceE
Q 035631 153 NPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVR 229 (684)
Q Consensus 153 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (684)
......|+.+|...+.+.+..+.+ +++++..+.||.+.-+......-............+. .
T Consensus 151 ------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 215 (274)
T d2pd4a1 151 ------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------R 215 (274)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred ------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------c
Confidence 222357999999999998877665 4799999999998765321111112222222222221 1
Q ss_pred ecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 230 SYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 230 ~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
-+...+|+|.++..++... ..|+++.+-+|.
T Consensus 216 r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 216 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence 3467899999999998643 367889888774
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.20 E-value=2.6e-11 Score=116.64 Aligned_cols=131 Identities=12% Similarity=0.160 Sum_probs=93.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.+ ++|
T Consensus 10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 89 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 89 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence 489999999999999999999999876 56889999999998887644 589
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-C-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-V-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+|+...... .+.+.+..+..+++|+.++..+.+++.. .+ . .++..||...+.......
T Consensus 90 ilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~----------- 158 (260)
T d1h5qa_ 90 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----------- 158 (260)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-----------
T ss_pred EecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc-----------
Confidence 9999998762211 2334456678999999999998887754 22 2 355565554332111100
Q ss_pred CCCCCCChhhhhhHhHhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~ 513 (684)
........|+.+|...+.+
T Consensus 159 ~~~~~~~~Y~asKaal~~l 177 (260)
T d1h5qa_ 159 NGSLTQVFYNSSKAACSNL 177 (260)
T ss_dssp TEECSCHHHHHHHHHHHHH
T ss_pred ccCccccchhhhhhhHHHH
Confidence 0011345799999999877
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1e-10 Score=114.23 Aligned_cols=124 Identities=14% Similarity=0.075 Sum_probs=93.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------------eeeeccCCChhHHHHHHHhc----
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------------EFGTGRLEDKNSLLDDMKRV---- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~d~~d~~~~~~~~~~~---- 418 (684)
+++|||||++-||.++++.|+++|++| ..+.+|++|.+++.++++..
T Consensus 13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 92 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 92 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 489999999999999999999999876 45778999999998887654
Q ss_pred -CCCeEEEcceecCC-CCccccccchhhHhhhchhhhHHHHHHHHHc-----CCeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 419 -RPTHVLNAAGITGR-PNVDWCESHRVETIRTNVMGTLTLADVCKEK-----NVLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 419 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
++|++||.|+.... +-.+...+.....+++|+.++..+.+++... +..+|++||+...+ .
T Consensus 93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~----~--------- 159 (297)
T d1yxma1 93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----F--------- 159 (297)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC----C---------
T ss_pred CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc----c---------
Confidence 68999999986621 1223344666789999999999999988743 23567665542111 0
Q ss_pred cCCCCCCCCChhhhhhHhHhhhh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+ ....|+.+|...+.+.
T Consensus 160 ---~---~~~~Y~asKaal~~lt 176 (297)
T d1yxma1 160 ---P---LAVHSGAARAGVYNLT 176 (297)
T ss_dssp ---T---TCHHHHHHHHHHHHHH
T ss_pred ---c---ccccchhHHHHHHHHH
Confidence 1 2357999999988773
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.19 E-value=3.2e-10 Score=109.34 Aligned_cols=126 Identities=15% Similarity=0.153 Sum_probs=95.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d~V 423 (684)
+++|||||++-||..++++|+++|++| .++.+|++|.++++++++.. ++|++
T Consensus 7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 86 (268)
T d2bgka1 7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 86 (268)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCccee
Confidence 479999999999999999999999976 46789999999999887654 68999
Q ss_pred EEcceecCCCC---ccccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 424 LNAAGITGRPN---VDWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 424 ih~a~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
||+||...... .+...+.....+++|+.++..+.+++... + .++|++||+..+.. .
T Consensus 87 VnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~----------------~ 150 (268)
T d2bgka1 87 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----------------G 150 (268)
T ss_dssp EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----------------C
T ss_pred ccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc----------------c
Confidence 99999752211 12234556788999999999999988642 2 36899988754321 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
+. ....|+.+|...+.+.
T Consensus 151 ~~-~~~~Y~asKaal~~lt 168 (268)
T d2bgka1 151 EG-VSHVYTATKHAVLGLT 168 (268)
T ss_dssp TT-SCHHHHHHHHHHHHHH
T ss_pred cc-cccccchhHHHHHhCH
Confidence 10 1237999999998773
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=9.6e-11 Score=112.11 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=128.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+++|||||++-||.++++.|+++|.+| .++.+|++|.++++++++.. ++
T Consensus 4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 479999999999999999999999876 56789999999998887654 68
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
|++||.|+.. ...+.+..+++|+.++.++.+++... +.++|++||...+-
T Consensus 84 DilVnnAg~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--------------- 141 (254)
T d2gdza1 84 DILVNNAGVN-------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--------------- 141 (254)
T ss_dssp CEEEECCCCC-------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred Ceeccccccc-------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc---------------
Confidence 9999999966 23456788999999988888877642 13599999985432
Q ss_pred CCCCCCCCChhhhhhHhHhhhhhH-----Hhhh--hhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHH
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLSYL-----EIFV--LVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTK 565 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 565 (684)
+.. ....|+.+|...+.+... +... ..+....|..+.++.... +... .-.+.....++.+.+
T Consensus 142 --~~~-~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~-~~~~-------~~~~~~~~~~~~~~~ 210 (254)
T d2gdza1 142 --PVA-QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE-------ENMGQYIEYKDHIKD 210 (254)
T ss_dssp --CCT-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH-------HHHGGGGGGHHHHHH
T ss_pred --CCC-CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhh-cccc-------ccccccHHHHHHHHh
Confidence 111 235799999988766321 2222 233334443332221110 0000 000000001111111
Q ss_pred hhhcccccccCCCccchhhHHHHHHHHHhcC-ccc-eeEecCCCcccHHH
Q 035631 566 LARYNKVVNIPNSMTVLDEMLPIAIEMARRN-CRG-AWNFTNPGVISHNE 613 (684)
Q Consensus 566 ~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~-~~g-~~ni~~~~~~s~~e 613 (684)
... . ..+...+|+|+++++++.++ ..| .+.+.+|..+.++|
T Consensus 211 ~~p------~-~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 211 MIK------Y-YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp HHH------H-HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred cCC------C-CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence 000 0 02367789999999999866 344 88888887665543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.18 E-value=7.3e-11 Score=111.67 Aligned_cols=123 Identities=18% Similarity=0.105 Sum_probs=95.6
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCe-------E------------------------eeeeccCCChhHHHHHHHhc---
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIA-------F------------------------EFGTGRLEDKNSLLDDMKRV--- 418 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~-------v------------------------~~~~~d~~d~~~~~~~~~~~--- 418 (684)
-||||||++-||.++++.|+++|++ | .++.+|++|.++++++++..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999999999999999999975 2 56789999999998887654
Q ss_pred --CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc----C-CeEEEEecceeeecCCCCCCCCCCCC
Q 035631 419 --RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK----N-VLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 419 --~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
++|++||.||....... +.+.+.....+++|+.++..+.+++..+ + .++|++||...+.+.
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------- 151 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------- 151 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC-----------
Confidence 58999999997632222 2345666789999999999998888742 3 479999998544211
Q ss_pred ccCCCCCCCCChhhhhhHhHhhh
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
. ....|+.+|...+.+
T Consensus 152 ------~-~~~~Y~asK~al~~l 167 (240)
T d2bd0a1 152 ------R-HSSIYCMSKFGQRGL 167 (240)
T ss_dssp ------T-TCHHHHHHHHHHHHH
T ss_pred ------C-CChHHHHHHHHHHHH
Confidence 0 235799999888766
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.16 E-value=2.4e-10 Score=110.69 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=95.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||..+++.|+++|++| .++.+|++|.+++.+.++.. ++|
T Consensus 19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 98 (272)
T d1g0oa_ 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD 98 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999999876 56778999999998887654 689
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPN 497 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~ 497 (684)
+++|.++....... +.........+++|+.++..+++++... +.+.++++|+.... . +..
T Consensus 99 ilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~--~--------------~~~ 162 (272)
T d1g0oa_ 99 IVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA--K--------------AVP 162 (272)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC--S--------------SCS
T ss_pred ccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc--c--------------ccc
Confidence 99999987732222 2334556688899999999999999864 33577776653110 0 111
Q ss_pred CCCChhhhhhHhHhhhh
Q 035631 498 FTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 498 ~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 163 -~~~~Y~asKaal~~lt 178 (272)
T d1g0oa_ 163 -KHAVYSGSKGAIETFA 178 (272)
T ss_dssp -SCHHHHHHHHHHHHHH
T ss_pred -chhhHHHHHHHHHHHH
Confidence 3457999999988773
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=8.5e-11 Score=110.97 Aligned_cols=123 Identities=11% Similarity=0.055 Sum_probs=90.3
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeE---------------eeeeccCCChhHHHHHHHhc-CCCeEEEcceecCCCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAF---------------EFGTGRLEDKNSLLDDMKRV-RPTHVLNAAGITGRPN 434 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v---------------~~~~~d~~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~ 434 (684)
.+++|||||++-||..+++.|+++|++| .++.+|+++ .++.+++.+ ++|++||.||......
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~--~~~~~~~~~g~iD~lVnnAG~~~~~~ 81 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRK--DLDLLFEKVKEVDILVLNAGGPKAGF 81 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTT--CHHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHH--HHHHHHHHhCCCcEEEecccccCCcc
Confidence 3589999999999999999999999988 566778764 345555544 5799999998662212
Q ss_pred -ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhH
Q 035631 435 -VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKA 508 (684)
Q Consensus 435 -~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~ 508 (684)
.+.+.+.....+++|+.++..+.+++.. .+ .++|++||..... +.. ....|+.+|.
T Consensus 82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------------~~~-~~~~Y~asKa 143 (234)
T d1o5ia_ 82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------------PIE-NLYTSNSARM 143 (234)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------CCT-TBHHHHHHHH
T ss_pred hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------------ccc-ccccchhHHH
Confidence 1334456678899999999998888764 23 3689998875432 111 3457999999
Q ss_pred hHhhh
Q 035631 509 MVTFL 513 (684)
Q Consensus 509 ~~E~~ 513 (684)
..+.+
T Consensus 144 al~~l 148 (234)
T d1o5ia_ 144 ALTGF 148 (234)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88866
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.16 E-value=3.9e-10 Score=110.33 Aligned_cols=222 Identities=14% Similarity=0.071 Sum_probs=140.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC--------------------CCCCCCCceEEEecC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH--------------------PSRASPNFKFLKGDI 72 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~--------------------~~~~~~~~~~~~~Dl 72 (684)
.-+|||||++-||+++++.|+++ |++|++.+++.... ...+. ............+|+
T Consensus 3 pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv 79 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAE-ANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 79 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCHHH-HHHHHHHHHhhcCCceEEEEeecccccccccccccccccC
Confidence 46799999999999999999999 89999887753211 11000 000111234456778
Q ss_pred CCHHHHHHhhcc-----CCCCEEEEcCccCCcCCCCCC------------------hHHHHHHHHHHHHHHHHHHHh---
Q 035631 73 TCADLMNYLLVS-----EGIDTIMHFAAQTHVDNSFGN------------------SFEFTNNNIYGTHVLLEACKL--- 126 (684)
Q Consensus 73 ~d~~~~~~~~~~-----~~~d~Vih~a~~~~~~~~~~~------------------~~~~~~~n~~~~~~ll~~~~~--- 126 (684)
.+.+.+.+++.. .++|++||+||........+. ....+.+|+.++..+.+++..
T Consensus 80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 159 (284)
T d1e7wa_ 80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 159 (284)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence 888877766531 479999999997643222111 112567888888887776532
Q ss_pred ------cCCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeC
Q 035631 127 ------TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYG 197 (684)
Q Consensus 127 ------~~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 197 (684)
.+...++|+++|..... +......|+.+|...+.+.+.++.+ +++++..+.||..-.
T Consensus 160 ~~~~~~~~~~~~ii~~~s~~~~~--------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 160 GTPAKHRGTNYSIINMVDAMTNQ--------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTS--------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred hhHHHhcCCCCcccccccccccC--------------CccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 12245677777754321 2223457999999999999888766 488999999996432
Q ss_pred CCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCccC
Q 035631 198 PNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKERS 263 (684)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~~t 263 (684)
.. ...+..........++. .-+...+|+|+++..++... ..|+.+.+-+|-.++
T Consensus 226 ~~----~~~~~~~~~~~~~~pl~--------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 226 VD----DMPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp GG----GSCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cc----cCCHHHHHHHHhcCCCC--------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 22 12233444444333210 12456899999999998643 367889998776543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.15 E-value=3e-11 Score=114.55 Aligned_cols=126 Identities=15% Similarity=0.077 Sum_probs=93.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||..+++.|+++|++| .++.+|+++.++++++++.+ ++|++||
T Consensus 6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLin 85 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH 85 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEecc
Confidence 489999999999999999999999976 56889999999998888765 6899999
Q ss_pred cceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 426 AAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 426 ~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
.|+....... +...+.....+++|+.++..+.+++...-. +.|+++|+.... ... ....
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----------------~~~-~~~~ 147 (241)
T d2a4ka1 86 FAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----------------GAF-GLAH 147 (241)
T ss_dssp GGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----------------CHH-HHHH
T ss_pred ccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----------------ccc-Cccc
Confidence 9987632221 333455668999999999999999886532 344454442110 001 2356
Q ss_pred hhhhhHhHhhhhh
Q 035631 503 YSKTKAMVTFLSY 515 (684)
Q Consensus 503 Y~~sK~~~E~~~~ 515 (684)
|+.+|...|.+..
T Consensus 148 Y~~sK~al~~lt~ 160 (241)
T d2a4ka1 148 YAAGKLGVVGLAR 160 (241)
T ss_dssp HHHCSSHHHHHHH
T ss_pred cchhhHHHHHHHH
Confidence 9999999998843
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.15 E-value=6.4e-11 Score=113.86 Aligned_cols=125 Identities=11% Similarity=0.063 Sum_probs=93.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||.++++.|+++|++| ..+.+|++|.++++..++.. ++|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 86 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 86 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 489999999999999999999999976 56889999999988877643 589
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecc-eeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATG-CIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~-~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
++||.||....... +...+..+..+++|+.++..+++++..+ +.++++++|+ +.+.+. +
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~---------------~- 150 (259)
T d1ja9a_ 87 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---------------P- 150 (259)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC---------------C-
T ss_pred EEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC---------------C-
Confidence 99999997732222 2344566789999999999999999864 2245555554 222110 0
Q ss_pred CCCCChhhhhhHhHhhhh
Q 035631 497 NFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~~ 514 (684)
-...|+.+|...+.+.
T Consensus 151 --~~~~Y~asK~al~~l~ 166 (259)
T d1ja9a_ 151 --NHALYAGSKAAVEGFC 166 (259)
T ss_dssp --SCHHHHHHHHHHHHHH
T ss_pred --CchhHHHHHHHHHHHH
Confidence 2347999998888773
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.13 E-value=2.3e-10 Score=109.41 Aligned_cols=133 Identities=15% Similarity=0.064 Sum_probs=92.0
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC--eE---------------------eeeeccCCChhHHHHHHHhc-------C
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI--AF---------------------EFGTGRLEDKNSLLDDMKRV-------R 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~--~v---------------------~~~~~d~~d~~~~~~~~~~~-------~ 419 (684)
++++||||||++-||.+++++|+++|+ .| .++.+|++|.++++++++.. .
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence 345899999999999999999999995 23 67889999999988776532 3
Q ss_pred CCeEEEcceecCCC--CccccccchhhHhhhchhhhHHHHHHHHHc----------------CCeEEEEecceeeecCCC
Q 035631 420 PTHVLNAAGITGRP--NVDWCESHRVETIRTNVMGTLTLADVCKEK----------------NVLLMNFATGCIYEYDSM 481 (684)
Q Consensus 420 ~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------------~~~~i~~SS~~vy~~~~~ 481 (684)
+|++||+||..... ..+...+.....+++|+.++..+.+++... ...++.+|+...+-....
T Consensus 82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 161 (250)
T d1yo6a1 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc
Confidence 89999999975221 112233455688999999999998887531 124666665543321111
Q ss_pred CCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 482 HPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 482 ~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
. ..... |...|+.||+....+
T Consensus 162 ~----------~~~~~-~~~aY~aSKaal~~l 182 (250)
T d1yo6a1 162 S----------GSAQF-PVLAYRMSKAAINMF 182 (250)
T ss_dssp S----------TTSSS-CBHHHHHHHHHHHHH
T ss_pred c----------cccch-hHHHHHHHHHHHHHH
Confidence 0 01122 456799999998766
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.12 E-value=1.6e-10 Score=111.36 Aligned_cols=124 Identities=18% Similarity=0.258 Sum_probs=95.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCe-E---------------------------eeeeccCCChhHHHHHHHhc----CC
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIA-F---------------------------EFGTGRLEDKNSLLDDMKRV----RP 420 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~-v---------------------------~~~~~d~~d~~~~~~~~~~~----~~ 420 (684)
++|||||+|-||..++++|+++|.. | .++.+|++|.+++..+++.+ .+
T Consensus 11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i 90 (259)
T d2fr1a1 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPL 90 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccc
Confidence 8999999999999999999999973 2 56788999999999988765 37
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHcCC-eEEEEecceeeecCCCCCCCCCCCCccCCCCCC
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEKNV-LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNF 498 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~ 498 (684)
|.|||+|+....... +.........+++|+.++.++.+++...+. ++|++||....-+..
T Consensus 91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~------------------ 152 (259)
T d2fr1a1 91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------------ 152 (259)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------------
T ss_pred cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc------------------
Confidence 889999997732221 222344557789999999999998887654 699999986442111
Q ss_pred CCChhhhhhHhHhhhh
Q 035631 499 TRSFYSKTKAMVTFLS 514 (684)
Q Consensus 499 p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 153 ~~~~YaAaka~l~~la 168 (259)
T d2fr1a1 153 GLGGYAPGNAYLDGLA 168 (259)
T ss_dssp TCTTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHhHHHHH
Confidence 2357999999887764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.11 E-value=5.7e-10 Score=107.33 Aligned_cols=124 Identities=13% Similarity=0.091 Sum_probs=90.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+.+|||||++-||..++++|+++|++| .++.+|++|.++++++++.. +
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 85 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 85 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 479999999999999999999999866 56789999999998888754 6
Q ss_pred CCeEEEcceecCCCCc-----cccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEeccee-eecCCCCCCCCCCC
Q 035631 420 PTHVLNAAGITGRPNV-----DWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCI-YEYDSMHPQGSSIG 489 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~v-y~~~~~~~~~~~~~ 489 (684)
+|++||+||....... +...+..+..+++|+.++..+.+++.. .+..+|+++|+.. +.
T Consensus 86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~------------ 153 (264)
T d1spxa_ 86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH------------ 153 (264)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS------------
T ss_pred CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc------------
Confidence 8999999986521111 112345567899999999999888874 2346777766532 21
Q ss_pred CccCCCCCCCCChhhhhhHhHhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+......|+.+|...+.+
T Consensus 154 ------~~~~~~~Y~asKaal~~l 171 (264)
T d1spxa_ 154 ------ATPDFPYYSIAKAAIDQY 171 (264)
T ss_dssp ------CCTTSHHHHHHHHHHHHH
T ss_pred ------cCCCchhhhhhhhhHHHH
Confidence 110235699999998877
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.11 E-value=2.8e-10 Score=111.31 Aligned_cols=124 Identities=16% Similarity=0.127 Sum_probs=92.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee------------------------------eeccCCChhHHHHHHHhc---
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF------------------------------GTGRLEDKNSLLDDMKRV--- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~------------------------------~~~d~~d~~~~~~~~~~~--- 418 (684)
+++|||||++-||..+++.|+++|++|.+ ...|++|.+..+++++..
T Consensus 8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~ 87 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDT 87 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 37999999999999999999999998732 335667776666555432
Q ss_pred --CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCC
Q 035631 419 --RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGF 490 (684)
Q Consensus 419 --~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~ 490 (684)
++|++||.||....... +.+.+.....+++|+.++..+.+++.. .+ -++|++||...+-+.+
T Consensus 88 ~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~---------- 157 (302)
T d1gz6a_ 88 FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF---------- 157 (302)
T ss_dssp TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC----------
Confidence 68999999997732222 333456678999999999999998764 23 4899999986442111
Q ss_pred ccCCCCCCCCChhhhhhHhHhhh
Q 035631 491 KEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 491 ~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
....|+.+|...+.+
T Consensus 158 --------~~~~Y~asKaal~~l 172 (302)
T d1gz6a_ 158 --------GQANYSAAKLGLLGL 172 (302)
T ss_dssp --------TCHHHHHHHHHHHHH
T ss_pred --------CcHHHHHHHHHHHHH
Confidence 235799999998877
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.11 E-value=4.8e-09 Score=103.03 Aligned_cols=229 Identities=15% Similarity=0.045 Sum_probs=140.8
Q ss_pred CCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCCcEEEEEcCCCccc-----------ccccCCCCCCCCCc-eEEEecC-
Q 035631 8 ASYKPKKILITGAAG--FIGSHVTNRLIKNYPDYEIVALDKLDYCS-----------SLKNLHPSRASPNF-KFLKGDI- 72 (684)
Q Consensus 8 ~~~~~~~VlItGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----------~~~~l~~~~~~~~~-~~~~~Dl- 72 (684)
..+.+|++|||||+| -||.++++.|+++ |.+|++.+|+.... .............. ....+|.
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 345779999999987 7999999999999 89999988742100 00001111011111 1222221
Q ss_pred ----------------------CCHHHHHH-hhcc-CCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHH
Q 035631 73 ----------------------TCADLMNY-LLVS-EGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLE 122 (684)
Q Consensus 73 ----------------------~d~~~~~~-~~~~-~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~ 122 (684)
.+.+.+.+ +... .++|++||+||.... +.+.+++...+++|+.+...+.+
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 12222222 2111 489999999986421 22333456788999999999998
Q ss_pred HHHhcC-CCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH----HhcCCCEEEEeeCceeC
Q 035631 123 ACKLTG-QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH----RSYGLPTITTRGNNVYG 197 (684)
Q Consensus 123 ~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~~~~~ilR~~~v~G 197 (684)
++.... .-.+.+.+++.+..... ......|..+|...+.+.+..+ ..+++++..+.||.+..
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~-------------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T 228 (297)
T d1d7oa_ 162 HFLPIMNPGGASISLTYIASERII-------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS 228 (297)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSCC-------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred HHHHHhhcCCcceeeeehhhcccc-------------cccccceecccccccccccccchhccccceEEecccccccccc
Confidence 886532 12345555554432111 1223469999988887765543 34589999999999987
Q ss_pred CCCCCCChHHHHHHHHHcCCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCC
Q 035631 198 PNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKK 260 (684)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~ 260 (684)
+..........+.+...+.-|+. .+...+|+|.+++.++... ..|+++.+-+|-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 229 RAAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp CCSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 75533334455555554433322 2456899999999998542 367888887663
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.11 E-value=4e-11 Score=114.69 Aligned_cols=124 Identities=7% Similarity=0.051 Sum_probs=92.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHHHHhc-----CCCeEEEccee
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLNAAGI 429 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~ 429 (684)
++|||||++-||..+++.|+++|++| .+..+|+++.++++++++.. ++|++||.||.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 68999999999999999999999988 34567777777777666543 68999999986
Q ss_pred cCC--CCccccccchhhHhhhchhhhHHHHHHHHH----c-CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCCh
Q 035631 430 TGR--PNVDWCESHRVETIRTNVMGTLTLADVCKE----K-NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSF 502 (684)
Q Consensus 430 ~~~--~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~ 502 (684)
... +-.+.+.++....+++|+.++..+.+++.. . +-++|++||...+.+. . -...
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~-----------------~-~~~~ 143 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------------K-ELST 143 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------------T-TCHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc-----------------c-cccc
Confidence 521 112333455668889999999999988764 2 3479999998544211 0 2357
Q ss_pred hhhhhHhHhhhh
Q 035631 503 YSKTKAMVTFLS 514 (684)
Q Consensus 503 Y~~sK~~~E~~~ 514 (684)
|+.+|...+.+.
T Consensus 144 Y~asKaal~~lt 155 (252)
T d1zmta1 144 YTSARAGACTLA 155 (252)
T ss_dssp HHHHHHHHHHHH
T ss_pred cccccccHHHHH
Confidence 999999998773
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.10 E-value=2.9e-10 Score=109.84 Aligned_cols=124 Identities=12% Similarity=0.099 Sum_probs=91.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+++|||||++-||..+++.|+++|++| ..+.+|++|.++++++++.. +
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 85 (272)
T d1xkqa_ 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 85 (272)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 489999999999999999999999866 46789999999998887654 6
Q ss_pred CCeEEEcceecCCCCcc-----ccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecc-eeeecCCCCCCCCCCC
Q 035631 420 PTHVLNAAGITGRPNVD-----WCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATG-CIYEYDSMHPQGSSIG 489 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~-~vy~~~~~~~~~~~~~ 489 (684)
+|++||.||........ .........+++|+.++..+.+++.. .+-.+|+++|+ ....
T Consensus 86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~------------ 153 (272)
T d1xkqa_ 86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ------------ 153 (272)
T ss_dssp CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS------------
T ss_pred ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc------------
Confidence 89999999976321111 11223557789999999999998765 23456666654 2221
Q ss_pred CccCCCCCCCCChhhhhhHhHhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+.. -...|+.+|...+.+
T Consensus 154 -----~~~-~~~~Y~asKaal~~l 171 (272)
T d1xkqa_ 154 -----AQP-DFLYYAIAKAALDQY 171 (272)
T ss_dssp -----CCC-SSHHHHHHHHHHHHH
T ss_pred -----CCC-CcchhhhHHHHHHHH
Confidence 000 235799999998877
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.10 E-value=2.4e-10 Score=109.74 Aligned_cols=125 Identities=12% Similarity=0.057 Sum_probs=93.9
Q ss_pred eEEEEEcCCc--chhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTG--WIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+| -||..++++|+++|++| ..+.+|++|.++++++++.. ++|
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCce
Confidence 4799999998 69999999999999977 56789999999998887653 579
Q ss_pred eEEEcceecCC-----CCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccC
Q 035631 422 HVLNAAGITGR-----PNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKED 493 (684)
Q Consensus 422 ~Vih~a~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~ 493 (684)
++||+|+.... +..+....+....+++|+.++..+++++... +.++|++||.....+
T Consensus 89 ilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~--------------- 153 (256)
T d1ulua_ 89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------------- 153 (256)
T ss_dssp EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------------
T ss_pred EEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC---------------
Confidence 99999986410 0112223345568899999999999988753 236999998754321
Q ss_pred CCCCCCCChhhhhhHhHhhhh
Q 035631 494 DEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 494 ~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.. ....|+.+|...+.+.
T Consensus 154 --~~-~~~~Y~asKaal~~lt 171 (256)
T d1ulua_ 154 --VP-KYNVMAIAKAALEASV 171 (256)
T ss_dssp --CT-TCHHHHHHHHHHHHHH
T ss_pred --CC-CchHHHHHHHHHHHHH
Confidence 11 3467999999998773
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=4e-10 Score=107.71 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=96.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE--------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF--------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
+.+|||||++-||.++++.|+++|++| .++.+|+++.++++++++.+ ++
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i 90 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 90 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999976 56789999999998877654 58
Q ss_pred CeEEEcceecCCC-CccccccchhhHhhhchhhhHHHHHHHHH----cC---CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGRP-NVDWCESHRVETIRTNVMGTLTLADVCKE----KN---VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~---~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
|++||+|+..... -.+.+.+.....+++|+.++..+.+++.+ .+ .++|++||.+-+..
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------------- 156 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-------------- 156 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--------------
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC--------------
Confidence 9999999876211 12344567778999999999998777643 22 47999999854310
Q ss_pred CCCCCCCCChhhhhhHhHhhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.+......|+.+|...+.+.
T Consensus 157 --~p~~~~~~Y~~sKaal~~lt 176 (257)
T d1xg5a_ 157 --LPLSVTHFYSATKYAVTALT 176 (257)
T ss_dssp --CSCGGGHHHHHHHHHHHHHH
T ss_pred --CCCcccHHHHHHHHHHHhCH
Confidence 11112346999999998773
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.09 E-value=1.4e-10 Score=112.46 Aligned_cols=125 Identities=16% Similarity=0.120 Sum_probs=93.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------eeeeccCCChhHHHHHHHhc-----CCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------EFGTGRLEDKNSLLDDMKRV-----RPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~d~~d~~~~~~~~~~~-----~~d~Vih 425 (684)
+++|||||++-||.++++.|+++|++| ..+.+|+++.++++++++.. ++|++||
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvn 85 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIP 85 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccc
Confidence 489999999999999999999999976 66788999999988887653 6899999
Q ss_pred cceecCCCCcc--ccc----cchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCC
Q 035631 426 AAGITGRPNVD--WCE----SHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDE 495 (684)
Q Consensus 426 ~a~~~~~~~~~--~~~----~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~ 495 (684)
.||........ ... ......+++|+.++..+.+++.. .+-++|++||+..+-+. +
T Consensus 86 nAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~---------------~ 150 (276)
T d1bdba_ 86 NAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPN---------------G 150 (276)
T ss_dssp CCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTT---------------S
T ss_pred cccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCC---------------C
Confidence 99965211111 111 22457899999999999888763 45578888887433100 0
Q ss_pred CCCCCChhhhhhHhHhhhh
Q 035631 496 PNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 496 ~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 151 ---~~~~Y~asKaal~~lt 166 (276)
T d1bdba_ 151 ---GGPLYTAAKHAIVGLV 166 (276)
T ss_dssp ---SCHHHHHHHHHHHHHH
T ss_pred ---CCchHHHHHHHHHHHH
Confidence 2357999999988773
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.5e-10 Score=109.49 Aligned_cols=124 Identities=15% Similarity=0.060 Sum_probs=95.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------eeeeccCCChhHHHHHHHhc-----CCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~d~ 422 (684)
+.++||||++-||.+++++|+++|.+| ..+.+|++|.++++++++.. ++|+
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi 87 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 87 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence 389999999999999999999999876 67889999999998887644 5899
Q ss_pred EEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 423 VLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 423 Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
+||+||...... .+...+..+..+++|+.++.++.+++.. .+ .++|++||...+-+
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~------------------ 149 (244)
T d1yb1a_ 88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS------------------ 149 (244)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC------------------
T ss_pred eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC------------------
Confidence 999999872211 1233455668999999999999887764 23 36999999865421
Q ss_pred CCCCChhhhhhHhHhhh
Q 035631 497 NFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~ 513 (684)
......|+.||...+.+
T Consensus 150 ~~~~~~Y~asKaal~~~ 166 (244)
T d1yb1a_ 150 VPFLLAYCSSKFAAVGF 166 (244)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 10235799999998766
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.09 E-value=1.8e-10 Score=109.85 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=90.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCC-ChhHHHHHHHhc-----CC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLE-DKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~-d~~~~~~~~~~~-----~~ 420 (684)
+++|||||++-||..++++|+++|.+| .++..|++ +.++++++++.. ++
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~i 85 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV 85 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999864 56778887 555666665543 68
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc--------CCeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK--------NVLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
|++||.||.. ..+.-+..+++|+.++.++.+++... +.++|++||...+.+
T Consensus 86 DilvnnAG~~-------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-------------- 144 (254)
T d1sbya1 86 DILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-------------- 144 (254)
T ss_dssp CEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--------------
T ss_pred CEEEeCCCCC-------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC--------------
Confidence 9999999965 24566789999999999999988752 135999998855421
Q ss_pred CCCCCCCCChhhhhhHhHhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
.. ....|+.+|.....+
T Consensus 145 ---~~-~~~~Y~asKaal~~~ 161 (254)
T d1sbya1 145 ---IH-QVPVYSASKAAVVSF 161 (254)
T ss_dssp ---CT-TSHHHHHHHHHHHHH
T ss_pred ---CC-CCHHHHHHHHHHHHH
Confidence 11 345799999988766
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.07 E-value=4.6e-10 Score=108.50 Aligned_cols=124 Identities=13% Similarity=0.095 Sum_probs=91.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE---------------------------eeeeccCCChhHHHHHHHhc-----C
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF---------------------------EFGTGRLEDKNSLLDDMKRV-----R 419 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~d~~d~~~~~~~~~~~-----~ 419 (684)
+++|||||++-||..+++.|+++|.+| ..+.+|++|.++++++++.. +
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 84 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 84 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999999876 46778999999998887654 6
Q ss_pred CCeEEEcceecCCCCcc---ccccchhhHhhhchhhhHHHHHHHHHc----CC-eEEEEecceeeecCCCCCCCCCCCCc
Q 035631 420 PTHVLNAAGITGRPNVD---WCESHRVETIRTNVMGTLTLADVCKEK----NV-LLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~-~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
+|++||.||........ ...+.....+++|+.++..+.+++... +. .++++||...+.
T Consensus 85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-------------- 150 (274)
T d1xhla_ 85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-------------- 150 (274)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS--------------
T ss_pred ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc--------------
Confidence 89999999865211111 123456688999999999999888753 22 466666553221
Q ss_pred cCCCCCCCCChhhhhhHhHhhh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+.. ....|+.+|...+.+
T Consensus 151 ---~~~-~~~~Y~asKaal~~l 168 (274)
T d1xhla_ 151 ---AHS-GYPYYACAKAALDQY 168 (274)
T ss_dssp ---CCT-TSHHHHHHHHHHHHH
T ss_pred ---cCC-CCceehhhhhHHHHH
Confidence 000 235799999998877
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.05 E-value=1.1e-09 Score=104.26 Aligned_cols=127 Identities=16% Similarity=0.082 Sum_probs=91.2
Q ss_pred eEEEEEcCCcchhHHHHHHHH---hcCCeE-----------------------eeeeccCCChhHHHHHHHh-------c
Q 035631 372 LKFLIYGKTGWIGGLLGKYCK---DKGIAF-----------------------EFGTGRLEDKNSLLDDMKR-------V 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~---~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~-------~ 418 (684)
++||||||++-||..++++|+ ++|+.| .++.+|++|.++++++++. .
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 479999999999999999997 467755 6788999999998877663 2
Q ss_pred CCCeEEEcceecCCCC--ccccccchhhHhhhchhhhHHHHHHHHHc----------------CCeEEEEecceeeecCC
Q 035631 419 RPTHVLNAAGITGRPN--VDWCESHRVETIRTNVMGTLTLADVCKEK----------------NVLLMNFATGCIYEYDS 480 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------------~~~~i~~SS~~vy~~~~ 480 (684)
++|++||.||...... .+...+.....+++|+.++..+.+++... +.++|++||..-.- .
T Consensus 83 ~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~--~ 160 (248)
T d1snya_ 83 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI--Q 160 (248)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS--T
T ss_pred CcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc--C
Confidence 5899999999752211 12233445678999999999998887531 23689998863220 0
Q ss_pred CCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 481 MHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 481 ~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
. .+......|+.||.....+
T Consensus 161 ~-------------~~~~~~~~Y~aSKaal~~l 180 (248)
T d1snya_ 161 G-------------NTDGGMYAYRTSKSALNAA 180 (248)
T ss_dssp T-------------CCSCCCHHHHHHHHHHHHH
T ss_pred C-------------CCCCChHHHHHHHHHHHHH
Confidence 0 1110335799999988766
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.05 E-value=1.3e-09 Score=105.36 Aligned_cols=219 Identities=16% Similarity=0.114 Sum_probs=133.2
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCC----HHHHHHhhc---
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITC----ADLMNYLLV--- 83 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d----~~~~~~~~~--- 83 (684)
..|||||++-||.++++.|+++ |++|+..+|+.... .+.+. ..........++.|..+ .+.+.+++.
T Consensus 3 vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGA-AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 79 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHH-HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence 5799999999999999999999 89999999974211 11110 01122345556655544 222322221
Q ss_pred --cCCCCEEEEcCccCCcCCCCC---------------ChHHHHHHHHHHHHHHHHHHHhc--------CCCcEEEEEeC
Q 035631 84 --SEGIDTIMHFAAQTHVDNSFG---------------NSFEFTNNNIYGTHVLLEACKLT--------GQVKRFIHVST 138 (684)
Q Consensus 84 --~~~~d~Vih~a~~~~~~~~~~---------------~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~i~~SS 138 (684)
...+|++||+||......... .....+..|.............. .....++.+|+
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (266)
T d1mxha_ 80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 159 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence 147999999999754322111 01123344554444444443321 11345566665
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc
Q 035631 139 DEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK 215 (684)
Q Consensus 139 ~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 215 (684)
..... +......|+.+|...+.+.+.++.+ +++++..+.||.+.-+...+ ........+
T Consensus 160 ~~~~~--------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----~~~~~~~~~ 221 (266)
T d1mxha_ 160 AMTDL--------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRR 221 (266)
T ss_dssp GGGGS--------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC----HHHHHHHHT
T ss_pred ccccc--------------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC----HHHHHHHHh
Confidence 44321 1223457999999999998888765 48999999999987553322 233334433
Q ss_pred CCceEEecCCCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCCCc
Q 035631 216 GQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTKKE 261 (684)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~~~ 261 (684)
.-++. +-+...+|+|.+++.++... ..|+++.+-+|-.
T Consensus 222 ~~pl~--------r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 222 KVPLG--------QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp TCTTT--------SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCCCC--------CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 32211 12356899999999999653 3678898887643
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=4.9e-10 Score=108.93 Aligned_cols=124 Identities=18% Similarity=0.085 Sum_probs=94.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------------------------eeeeccCCChhHHHHHHHhc---
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------------------------EFGTGRLEDKNSLLDDMKRV--- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~d~~d~~~~~~~~~~~--- 418 (684)
+-||||||++-||.++++.|+++|.+| ..+.+|++|.+++..+++..
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 357999999999999999999998642 56788999999999888764
Q ss_pred CCCeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----cC-CeEEEEecceeeecCCCCCCCCCCCCcc
Q 035631 419 RPTHVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----KN-VLLMNFATGCIYEYDSMHPQGSSIGFKE 492 (684)
Q Consensus 419 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~i~~SS~~vy~~~~~~~~~~~~~~~e 492 (684)
.+|+++|.|+....... +...+.....+++|+.|+.++.+++.. .+ -++|++||...+-
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~--------------- 147 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--------------- 147 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS---------------
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC---------------
Confidence 58999999987732222 233456678899999999999888763 33 4799999985431
Q ss_pred CCCCCCCCChhhhhhHhHhhh
Q 035631 493 DDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 493 ~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+.. ....|+.||...+.+
T Consensus 148 --~~~-~~~~Y~asKaal~~l 165 (285)
T d1jtva_ 148 --GLP-FNDVYCASKFALEGL 165 (285)
T ss_dssp --CCT-TCHHHHHHHHHHHHH
T ss_pred --CCC-CchHHHHHHHHHHHH
Confidence 110 235799999998877
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.98 E-value=5.2e-10 Score=105.73 Aligned_cols=125 Identities=11% Similarity=-0.004 Sum_probs=86.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee--------------eeccCCChhHHHHHH-------HhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF--------------GTGRLEDKNSLLDDM-------KRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~--------------~~~d~~d~~~~~~~~-------~~~~~d~Vih~a~~~ 430 (684)
++||||||+|-||..+++.|+++|++|.. ...|..+.+..+.+. ...++|++||+||..
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~ 82 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGW 82 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCccc
Confidence 48999999999999999999999998832 333444444443332 222579999999853
Q ss_pred C--CCCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 431 G--RPNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 431 ~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
. .+..+...+..+..+++|+.++.++.+++..+ +.++|++||...+.+. . -...|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-----------------~-~~~~Y~a 144 (236)
T d1dhra_ 83 AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------------P-GMIGYGM 144 (236)
T ss_dssp CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------------T-TBHHHHH
T ss_pred ccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc-----------------c-CCcccHH
Confidence 1 11112223455678999999999999998864 3479999998544211 0 2357999
Q ss_pred hhHhHhhhh
Q 035631 506 TKAMVTFLS 514 (684)
Q Consensus 506 sK~~~E~~~ 514 (684)
||...+.+.
T Consensus 145 sKaal~~lt 153 (236)
T d1dhra_ 145 AKGAVHQLC 153 (236)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998773
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.97 E-value=7.3e-10 Score=104.70 Aligned_cols=125 Identities=17% Similarity=0.125 Sum_probs=86.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee--------------eeccCCChhHHHHH-------HHhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF--------------GTGRLEDKNSLLDD-------MKRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~--------------~~~d~~d~~~~~~~-------~~~~~~d~Vih~a~~~ 430 (684)
.|||||||+|-||..++++|+++|++|.. ..+|.++.+..... ++.-++|++||+||..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~ 82 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW 82 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccc
Confidence 48999999999999999999999998833 33444433333222 2223579999999864
Q ss_pred C--CCCccccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhh
Q 035631 431 G--RPNVDWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSK 505 (684)
Q Consensus 431 ~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~ 505 (684)
. .+......+..+..+++|+.++..+.+++..+ +.++|++||...+.+. . -...|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~-----------------~-~~~~Y~a 144 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----------------P-SMIGYGM 144 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------------T-TBHHHHH
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc-----------------c-cccchHH
Confidence 1 11111112345567999999999999988864 3469999987544211 1 2367999
Q ss_pred hhHhHhhhh
Q 035631 506 TKAMVTFLS 514 (684)
Q Consensus 506 sK~~~E~~~ 514 (684)
+|...+.+.
T Consensus 145 sKaal~~l~ 153 (235)
T d1ooea_ 145 AKAAVHHLT 153 (235)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998773
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.91 E-value=9.8e-09 Score=98.42 Aligned_cols=217 Identities=16% Similarity=0.081 Sum_probs=124.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHh----hcc--C
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYL----LVS--E 85 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~----~~~--~ 85 (684)
||.||||||++.||+++++.|+++ |++|++++|+... ...|+.+.+..... ... .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999 8999999986410 13566665543322 211 3
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEeCcccccCCCCCCCCC------C--
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQVKRFIHVSTDEVYGETDMESDIG------N-- 153 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~~------~-- 153 (684)
..|+++|+|+..... ........+|..+...+.+... +.. ......+++.............. .
T Consensus 62 ~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQT---KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp CCSEEEECCCCCTTC---SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred CCcEEEEcCCCCCcH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 599999999875432 3445666777777766665443 333 44555555533221110000000 0
Q ss_pred ------CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCceEEecC
Q 035631 154 ------PEASQLLPTNPYSATKAGAEMLVMAYHRS---YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224 (684)
Q Consensus 154 ------~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (684)
.......+...|+.+|...+.+.+.++.+ +++++..+.||.+-.+......--+.......+.. .
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~----- 211 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-P----- 211 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-C-----
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-C-----
Confidence 00000111235999999999998888655 48999999999986553210000001111111110 0
Q ss_pred CCceEecccHHHHHHHHHHHHhcC---CCCcEEEecCC
Q 035631 225 GSNVRSYLYCADVAEAFDVILHRG---VIGHVYNVGTK 259 (684)
Q Consensus 225 ~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~ni~~~ 259 (684)
+. .-+...+|+|+++..++... ..|+.+.+-+|
T Consensus 212 Pl--gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 212 PM--GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp ST--TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CC--CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 11 12456799999999998543 36778888766
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.91 E-value=2.2e-09 Score=103.02 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=91.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHh---cCCeE--------------------------eeeeccCCChhHHHHHHHhc----
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKD---KGIAF--------------------------EFGTGRLEDKNSLLDDMKRV---- 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~---~g~~v--------------------------~~~~~d~~d~~~~~~~~~~~---- 418 (684)
+.++||||++-||..++++|++ +|++| .++.+|+++.++++++++..
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 4689999999999999999986 68755 56889999999988887432
Q ss_pred -----CCCeEEEcceecCCCCc----cccccchhhHhhhchhhhHHHHHHHHHc----C---CeEEEEecceeeecCCCC
Q 035631 419 -----RPTHVLNAAGITGRPNV----DWCESHRVETIRTNVMGTLTLADVCKEK----N---VLLMNFATGCIYEYDSMH 482 (684)
Q Consensus 419 -----~~d~Vih~a~~~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~---~~~i~~SS~~vy~~~~~~ 482 (684)
.+|+++|.||..+.... +...+.....+++|+.++..+.+++... + .++|++||...+.
T Consensus 87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~----- 161 (259)
T d1oaaa_ 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ----- 161 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-----
T ss_pred hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-----
Confidence 35689999886521111 1122445578999999999999999753 2 2589999875432
Q ss_pred CCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 483 PQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 483 ~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
+.. ....|+.||...+.+
T Consensus 162 ------------~~~-~~~~Y~asKaal~~l 179 (259)
T d1oaaa_ 162 ------------PYK-GWGLYCAGKAARDML 179 (259)
T ss_dssp ------------CCT-TCHHHHHHHHHHHHH
T ss_pred ------------CCc-cchHHHHHHHHHHHH
Confidence 111 346799999998877
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.89 E-value=3.8e-09 Score=103.43 Aligned_cols=125 Identities=13% Similarity=0.014 Sum_probs=88.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+|-||.+++++|+++|++| ..+.+|+++.+.+..+++.. ++|
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 489999999999999999999999976 56779999999988776543 689
Q ss_pred eEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHH----c-CC-eEEEEecceeeecCCCCCCCCCCCCccCC
Q 035631 422 HVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKE----K-NV-LLMNFATGCIYEYDSMHPQGSSIGFKEDD 494 (684)
Q Consensus 422 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-~~-~~i~~SS~~vy~~~~~~~~~~~~~~~e~~ 494 (684)
++||+||....... ..........+.+|..+...+...+.. . .. .++.+||.....
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~----------------- 168 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET----------------- 168 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------------
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh-----------------
Confidence 99999997632221 122334556778888887777666542 1 22 356555543221
Q ss_pred CCCCCCChhhhhhHhHhhhh
Q 035631 495 EPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 495 ~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. ....|+.+|...+.+.
T Consensus 169 ~~~-~~~~YsasKaal~~lt 187 (294)
T d1w6ua_ 169 GSG-FVVPSASAKAGVEAMS 187 (294)
T ss_dssp CCT-TCHHHHHHHHHHHHHH
T ss_pred ccc-ccchHHHHHHHHHHHH
Confidence 111 2357999999998773
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.84 E-value=1.1e-07 Score=94.20 Aligned_cols=170 Identities=12% Similarity=0.014 Sum_probs=106.9
Q ss_pred CCEEEEEc--CCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc-----------cccCCC-CCCCCCceEEEe-------
Q 035631 12 PKKILITG--AAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-----------LKNLHP-SRASPNFKFLKG------- 70 (684)
Q Consensus 12 ~~~VlItG--atG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~l~~-~~~~~~~~~~~~------- 70 (684)
.+.+|||| ++.-||+.+++.|.++ |.+|+...+...... ...+.. ...........+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence 36789999 5569999999999999 899998766432100 000000 000011122222
Q ss_pred -------------cCCCHHHHHHhh----c-cCCCCEEEEcCccCCc------CCCCCChHHHHHHHHHHHHHHHHHHHh
Q 035631 71 -------------DITCADLMNYLL----V-SEGIDTIMHFAAQTHV------DNSFGNSFEFTNNNIYGTHVLLEACKL 126 (684)
Q Consensus 71 -------------Dl~d~~~~~~~~----~-~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~ 126 (684)
|+.+.+.++.++ + ..++|++||.||.... +..++++...+++|+.++..+.+++..
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 333332222221 1 1489999999986432 223345667889999988888888765
Q ss_pred c-CCCcEEEEEeCcccccCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCcee
Q 035631 127 T-GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS----YGLPTITTRGNNVY 196 (684)
Q Consensus 127 ~-~~~~~~i~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 196 (684)
. ..-.++|.+||....... +.+...|+.+|...+.+.+.++.+ +++++..+.||.|-
T Consensus 160 ~m~~~GsIv~iss~~~~~~~-------------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 160 IMKPQSSIISLTYHASQKVV-------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp GEEEEEEEEEEECGGGTSCC-------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hcccccccccceeehhcccc-------------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 3 223689999886543211 122356999999999988777643 58999999999773
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=4.6e-08 Score=93.95 Aligned_cols=124 Identities=13% Similarity=0.036 Sum_probs=90.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||++-||.++++.|+++|++| ..+..|.++.+......+.. .+|
T Consensus 15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~ 94 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 94 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCcc
Confidence 489999999999999999999999977 45666777777766554432 478
Q ss_pred eEEEcceecCCCC-ccccccchhhHhhhchhhhHHHHHHHHH----cCCeEEEEecceeeecCCCCCCCCCCCCccCCCC
Q 035631 422 HVLNAAGITGRPN-VDWCESHRVETIRTNVMGTLTLADVCKE----KNVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEP 496 (684)
Q Consensus 422 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~ 496 (684)
++++.|+...... .+...+.....+++|+.++..+.+++.. .+-++|++||+..+-+ .
T Consensus 95 ~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~-----------------~ 157 (269)
T d1xu9a_ 95 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------------Y 157 (269)
T ss_dssp EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------------C
T ss_pred ccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-----------------C
Confidence 9999988662111 1223345567899999999988888763 3457999998854311 1
Q ss_pred CCCCChhhhhhHhHhhh
Q 035631 497 NFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 497 ~~p~~~Y~~sK~~~E~~ 513 (684)
. ....|+.||...+.+
T Consensus 158 p-~~~~Y~asKaal~~~ 173 (269)
T d1xu9a_ 158 P-MVAAYSASKFALDGF 173 (269)
T ss_dssp T-TCHHHHHHHHHHHHH
T ss_pred C-CchHHHHHHHHHHHH
Confidence 0 346899999999876
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=1.9e-08 Score=95.68 Aligned_cols=125 Identities=17% Similarity=0.207 Sum_probs=86.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe---------------------eeeccCCChhHHHHHHHh-----cCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE---------------------FGTGRLEDKNSLLDDMKR-----VRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~---------------------~~~~d~~d~~~~~~~~~~-----~~~d~Vih 425 (684)
+.+|||||++-||..++++|+++|++|. ....|+.+.+.++..... ...|.+++
T Consensus 6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T d2o23a1 6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 85 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccccc
Confidence 4789999999999999999999999882 344455666555544332 24688888
Q ss_pred cceecCCCC-------ccccccchhhHhhhchhhhHHHHHHHHHc-----------CCeEEEEecceeeecCCCCCCCCC
Q 035631 426 AAGITGRPN-------VDWCESHRVETIRTNVMGTLTLADVCKEK-----------NVLLMNFATGCIYEYDSMHPQGSS 487 (684)
Q Consensus 426 ~a~~~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----------~~~~i~~SS~~vy~~~~~~~~~~~ 487 (684)
.++...... .+...+.....+++|+.++.++.+++... +.++|++||...+.+. +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---~---- 158 (248)
T d2o23a1 86 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---V---- 158 (248)
T ss_dssp CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---T----
T ss_pred ccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---C----
Confidence 765441111 11122455578899999999999998652 1259999998654211 0
Q ss_pred CCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 488 IGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 488 ~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
....|+.+|...+.+.
T Consensus 159 -----------~~~~Y~asKaal~~lt 174 (248)
T d2o23a1 159 -----------GQAAYSASKGGIVGMT 174 (248)
T ss_dssp -----------TCHHHHHHHHHHHHHH
T ss_pred -----------CchHHHHHHHHHHHHH
Confidence 3467999999998773
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.74 E-value=1.1e-08 Score=98.80 Aligned_cols=104 Identities=16% Similarity=0.070 Sum_probs=80.9
Q ss_pred eEE-EEEcCCcchhHHHHHHHHhc-CCeE------------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 372 LKF-LIYGKTGWIGGLLGKYCKDK-GIAF------------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 372 m~i-lItG~~G~iG~~l~~~L~~~-g~~v------------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
|+| |||||++-||..++++|+++ |..| .++.+|++|.++++++++.. ++
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 355 99999999999999999986 7765 67889999999998776654 68
Q ss_pred CeEEEcceecCCCCc-cccccchhhHhhhchhhhHHHHHHHHHc---CCeEEEEeccee
Q 035631 421 THVLNAAGITGRPNV-DWCESHRVETIRTNVMGTLTLADVCKEK---NVLLMNFATGCI 475 (684)
Q Consensus 421 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~i~~SS~~v 475 (684)
|++||.||....... ....+.....+++|+.|+..+.+++... ..++|++||...
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS 141 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence 999999997622111 1122344568999999999999999853 347999999753
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.70 E-value=8.9e-08 Score=93.02 Aligned_cols=124 Identities=13% Similarity=0.114 Sum_probs=82.9
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEee-------------------------------------------eeccCCChh
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEF-------------------------------------------GTGRLEDKN 409 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~-------------------------------------------~~~d~~d~~ 409 (684)
-+|||||++-||.++++.|+++|++|.+ ..+|+++.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 6799999999999999999999998722 234577777
Q ss_pred HHHHHHHhc-----CCCeEEEcceecCCCCcc-ccc--------------cchhhHhhhchhhhHHHHHHHHHc------
Q 035631 410 SLLDDMKRV-----RPTHVLNAAGITGRPNVD-WCE--------------SHRVETIRTNVMGTLTLADVCKEK------ 463 (684)
Q Consensus 410 ~~~~~~~~~-----~~d~Vih~a~~~~~~~~~-~~~--------------~~~~~~~~~nv~~~~~ll~~~~~~------ 463 (684)
+++++++.. ++|++||+||........ ... ......+.+|+.++..+.+++.+.
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 163 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA 163 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence 777776543 689999999976321111 111 111236788999999888876542
Q ss_pred ---C--CeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 464 ---N--VLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 464 ---~--~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+ ..+|+++|..... +.. ....|+.+|...+.+.
T Consensus 164 ~~~~~~~~ii~~~s~~~~~-----------------~~~-~~~~Y~asKaal~~lt 201 (284)
T d1e7wa_ 164 KHRGTNYSIINMVDAMTNQ-----------------PLL-GYTIYTMAKGALEGLT 201 (284)
T ss_dssp GGSCSCEEEEEECCTTTTS-----------------CCT-TCHHHHHHHHHHHHHH
T ss_pred HhcCCCCcccccccccccC-----------------Ccc-ceeeeccccccchhhh
Confidence 1 1356565552221 111 3467999999998773
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.67 E-value=4.1e-08 Score=92.89 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=114.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE------------eeeeccCCChhHHHHHHHh----cCCCeEEEcceecCCCC-
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF------------EFGTGRLEDKNSLLDDMKR----VRPTHVLNAAGITGRPN- 434 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v------------~~~~~d~~d~~~~~~~~~~----~~~d~Vih~a~~~~~~~- 434 (684)
+++|||||++-||..+++.|+++|++| ....+|+++......+... ...+.+++.++......
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 81 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccc
Confidence 379999999999999999999999988 4456777777666555432 23344555444321000
Q ss_pred ----ccccccchhhHhhhchhhhHHHHHHHHHc-----------CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCC
Q 035631 435 ----VDWCESHRVETIRTNVMGTLTLADVCKEK-----------NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFT 499 (684)
Q Consensus 435 ----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----------~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p 499 (684)
...........+++|+.+...+++.+... ..++|++||...+-+.+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------------------~ 143 (241)
T d1uaya_ 82 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------------------G 143 (241)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT------------------T
T ss_pred cccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC------------------C
Confidence 11112344567899999999888877542 12699999986542111 3
Q ss_pred CChhhhhhHhHhhhhhH---Hh--hhhhhhhhhhhhhhHHHHHHhhhhhhccccccceecCCCCCchHHHHhhhcccccc
Q 035631 500 RSFYSKTKAMVTFLSYL---EI--FVLVICIECLINFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVN 574 (684)
Q Consensus 500 ~~~Y~~sK~~~E~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (684)
...|+.+|...+.+... |. ++..+....+..+.++....... +...+... ..+
T Consensus 144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-------------------~~~~~~~~---~~~ 201 (241)
T d1uaya_ 144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-------------------KAKASLAA---QVP 201 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-------------------HHHHHHHT---TCC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh-------------------hHHHHHHh---cCC
Confidence 35899999999877322 22 22233333333222111110000 11111110 011
Q ss_pred cCCCccchhhHHHHHHHHHhcC-ccc-eeEecCCC
Q 035631 575 IPNSMTVLDEMLPIAIEMARRN-CRG-AWNFTNPG 607 (684)
Q Consensus 575 ~~~~~i~v~D~~~~~~~~~~~~-~~g-~~ni~~~~ 607 (684)
...-+...+|+++++++++... ..| ++.+.+|-
T Consensus 202 ~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 202 FPPRLGRPEEYAALVLHILENPMLNGEVVRLDGAL 236 (241)
T ss_dssp SSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred CCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCcc
Confidence 1123367899999999998755 344 77776653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=1.1e-07 Score=90.88 Aligned_cols=126 Identities=10% Similarity=0.052 Sum_probs=84.0
Q ss_pred ceEEEEEcCCc--chhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CC
Q 035631 371 RLKFLIYGKTG--WIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RP 420 (684)
Q Consensus 371 ~m~ilItG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~ 420 (684)
.+++|||||+| -||.++++.|+++|++| .....|..+..+....+... ++
T Consensus 5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (258)
T d1qsga_ 5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 84 (258)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence 35899999999 68899999999999988 33445566666555554432 47
Q ss_pred CeEEEcceecCCCCcc------ccccchhhHhhhchhhhHHHHHHHHHcC---CeEEEEecceeeecCCCCCCCCCCCCc
Q 035631 421 THVLNAAGITGRPNVD------WCESHRVETIRTNVMGTLTLADVCKEKN---VLLMNFATGCIYEYDSMHPQGSSIGFK 491 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~------~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~i~~SS~~vy~~~~~~~~~~~~~~~ 491 (684)
|+++|.|+.......+ ...+.......+|+.+...+++++...- ..+|++||.....
T Consensus 85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-------------- 150 (258)
T d1qsga_ 85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-------------- 150 (258)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------------
T ss_pred ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc--------------
Confidence 8999998865211111 1112334567788888888888887642 2478887764321
Q ss_pred cCCCCCCCCChhhhhhHhHhhhh
Q 035631 492 EDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 492 e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.. ....|+.+|...+.+.
T Consensus 151 ---~~~-~~~~Y~~sKaal~~lt 169 (258)
T d1qsga_ 151 ---AIP-NYNVMGLAKASLEANV 169 (258)
T ss_dssp ---BCT-TTTHHHHHHHHHHHHH
T ss_pred ---CCC-CcHHHHHHHHHHHHHH
Confidence 100 2357999999998773
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.60 E-value=1.9e-09 Score=97.99 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCC-CCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
...+|+|+||||+|.||+.+++.|+++ |.+|++++|+.. +...+... .....+....+|+.+.+.+.+++ .++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~i 93 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLD--KAQAAADSVNKRFKVNVTAAETADDASRAEAV--KGA 93 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT--TTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchH--HHHHHHHHHHhccchhhhhhhcccHHHHHHHh--cCc
Confidence 346799999999999999999999999 899999999742 22111110 11134567889999999999998 789
Q ss_pred CEEEEcCccCC
Q 035631 88 DTIMHFAAQTH 98 (684)
Q Consensus 88 d~Vih~a~~~~ 98 (684)
|+|||+||...
T Consensus 94 Dilin~Ag~g~ 104 (191)
T d1luaa1 94 HFVFTAGAIGL 104 (191)
T ss_dssp SEEEECCCTTC
T ss_pred CeeeecCcccc
Confidence 99999999643
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.60 E-value=1.5e-07 Score=90.48 Aligned_cols=127 Identities=11% Similarity=0.063 Sum_probs=81.8
Q ss_pred CceEEEEEcCCc--chhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhc-------
Q 035631 370 SRLKFLIYGKTG--WIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRV------- 418 (684)
Q Consensus 370 ~~m~ilItG~~G--~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~------- 418 (684)
..+++|||||+| -||.++++.|+++|.+| ..+.+|+++.++++.+++.+
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence 345899999765 49999999999999977 56778899888776665443
Q ss_pred -CCCeEEEcceecCCCC------ccccccchhhHhhhchhhhHHHHHHHHHcCC--eEEEEecceeeecCCCCCCCCCCC
Q 035631 419 -RPTHVLNAAGITGRPN------VDWCESHRVETIRTNVMGTLTLADVCKEKNV--LLMNFATGCIYEYDSMHPQGSSIG 489 (684)
Q Consensus 419 -~~d~Vih~a~~~~~~~------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~i~~SS~~vy~~~~~~~~~~~~~ 489 (684)
++|+++|+|+...... .+.........+..|+............... ..++++|..... +
T Consensus 85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----~------ 153 (268)
T d2h7ma1 85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-----A------ 153 (268)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-----C------
T ss_pred CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc-----c------
Confidence 3689999998641101 1111233345566667666666666655432 345554442221 0
Q ss_pred CccCCCCCCCCChhhhhhHhHhhhh
Q 035631 490 FKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 490 ~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
.+ -...|+.+|...+.+.
T Consensus 154 -----~p--~~~~y~~sK~a~~~lt 171 (268)
T d2h7ma1 154 -----MP--AYNWMTVAKSALESVN 171 (268)
T ss_dssp -----CT--TTHHHHHHHHHHHHHH
T ss_pred -----Cc--ccchhhccccchhhcc
Confidence 11 2357999999998774
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.45 E-value=4.7e-07 Score=89.50 Aligned_cols=126 Identities=10% Similarity=0.086 Sum_probs=86.3
Q ss_pred eEEEEEc--CCcchhHHHHHHHHhcCCeEeee------------------------------------------------
Q 035631 372 LKFLIYG--KTGWIGGLLGKYCKDKGIAFEFG------------------------------------------------ 401 (684)
Q Consensus 372 m~ilItG--~~G~iG~~l~~~L~~~g~~v~~~------------------------------------------------ 401 (684)
+..|||| ++.-||..+++.|+++|.+|.+.
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence 3679999 55689999999999999877332
Q ss_pred --------eccCCChhHHHHHHHhc-----CCCeEEEcceecC---CCCccccccchhhHhhhchhhhHHHHHHHHHc--
Q 035631 402 --------TGRLEDKNSLLDDMKRV-----RPTHVLNAAGITG---RPNVDWCESHRVETIRTNVMGTLTLADVCKEK-- 463 (684)
Q Consensus 402 --------~~d~~d~~~~~~~~~~~-----~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-- 463 (684)
..|+.+.++++.+++.. ++|++||.||... .+-.+...++....+++|+.++..+++++..+
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~ 162 (329)
T d1uh5a_ 83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK 162 (329)
T ss_dssp CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence 11334444455544422 5799999988652 11223445666788999999999999998864
Q ss_pred -CCeEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhhh
Q 035631 464 -NVLLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514 (684)
Q Consensus 464 -~~~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~~ 514 (684)
+.++|.+||..... ..|. ....|+.+|...+.+.
T Consensus 163 ~~GsIv~iss~~~~~----------------~~p~-y~~~y~asKaal~~lt 197 (329)
T d1uh5a_ 163 PQSSIISLTYHASQK----------------VVPG-YGGGMSSAKAALESDT 197 (329)
T ss_dssp EEEEEEEEECGGGTS----------------CCTT-CTTTHHHHHHHHHHHH
T ss_pred cccccccceeehhcc----------------cccc-cchhhhhhhccccccc
Confidence 23588888764331 1122 3467999999998773
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.40 E-value=1.5e-06 Score=84.56 Aligned_cols=125 Identities=11% Similarity=0.012 Sum_probs=80.8
Q ss_pred eEEEEEcCCc--chhHHHHHHHHhcCCeEeeeec------------------------------------c---------
Q 035631 372 LKFLIYGKTG--WIGGLLGKYCKDKGIAFEFGTG------------------------------------R--------- 404 (684)
Q Consensus 372 m~ilItG~~G--~iG~~l~~~L~~~g~~v~~~~~------------------------------------d--------- 404 (684)
+++|||||+| -||..+++.|+++|.+|.+... |
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV 88 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence 4899999987 7999999999999998843211 1
Q ss_pred -----------CCChhHHHHHHH----hc-CCCeEEEcceecC---CCCccccccchhhHhhhchhhhHHHHHHHHHcCC
Q 035631 405 -----------LEDKNSLLDDMK----RV-RPTHVLNAAGITG---RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNV 465 (684)
Q Consensus 405 -----------~~d~~~~~~~~~----~~-~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~ 465 (684)
..+...++++++ .+ ++|++||.||... .+..+.+.+.....+++|+.++..+++++.....
T Consensus 89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~ 168 (297)
T d1d7oa_ 89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN 168 (297)
T ss_dssp CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence 011222222222 22 5799999998641 1222344556678899999999999999886532
Q ss_pred ---eEEEEecceeeecCCCCCCCCCCCCccCCCCCCCCChhhhhhHhHhhh
Q 035631 466 ---LLMNFATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFL 513 (684)
Q Consensus 466 ---~~i~~SS~~vy~~~~~~~~~~~~~~~e~~~~~~p~~~Y~~sK~~~E~~ 513 (684)
..+.+++++.... ... ....|+.+|...+.+
T Consensus 169 ~~g~~~~~~~~~~~~~----------------~~~-~~~~y~~aKaa~~~l 202 (297)
T d1d7oa_ 169 PGGASISLTYIASERI----------------IPG-YGGGMSSAKAALESD 202 (297)
T ss_dssp EEEEEEEEECGGGTSC----------------CTT-CTTTHHHHHHHHHHH
T ss_pred cCCcceeeeehhhccc----------------ccc-cccceeccccccccc
Confidence 3555555532210 111 345799999888766
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.40 E-value=1.5e-06 Score=83.43 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=48.5
Q ss_pred eEEEEEcCCc--chhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhc-----CCC
Q 035631 372 LKFLIYGKTG--WIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRV-----RPT 421 (684)
Q Consensus 372 m~ilItG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~-----~~d 421 (684)
+++|||||+| -||.++++.|+++|++| .+...|+++.+.+.+++... ++|
T Consensus 6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id 85 (274)
T d2pd4a1 6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD 85 (274)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCC
Confidence 5899999987 69999999999999988 44567788888877666433 579
Q ss_pred eEEEcceec
Q 035631 422 HVLNAAGIT 430 (684)
Q Consensus 422 ~Vih~a~~~ 430 (684)
++||+++..
T Consensus 86 ~lV~nag~~ 94 (274)
T d2pd4a1 86 FIVHSVAFA 94 (274)
T ss_dssp EEEECCCCC
T ss_pred eEEeecccc
Confidence 999999866
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.25 E-value=1.2e-05 Score=76.56 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=24.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF 398 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v 398 (684)
..|||||++-||..+++.|+++|++|
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~V 28 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRV 28 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 57999999999999999999999987
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.24 E-value=4.1e-07 Score=82.07 Aligned_cols=80 Identities=14% Similarity=0.111 Sum_probs=60.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-----------------------eeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
++++||||+|.||..+++.|+++|.+| .....|++|.+.+.+++.+. |+|||+|+
T Consensus 24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i--Dilin~Ag 101 (191)
T d1luaa1 24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA--HFVFTAGA 101 (191)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC--SEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc--CeeeecCc
Confidence 589999999999999999999999977 45667889999999999877 99999998
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHH
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTL 456 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~l 456 (684)
.. ......+......+.|+.+..+.
T Consensus 102 ~g---~~~~~~e~~~~~~~~nv~~~~~~ 126 (191)
T d1luaa1 102 IG---LELLPQAAWQNESSIEIVADYNA 126 (191)
T ss_dssp TT---CCCBCHHHHHTCTTCCEEEECCC
T ss_pred cc---cccCCHHHHHhhhcceeehhHhh
Confidence 54 22223333344455555444443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.21 E-value=7.2e-07 Score=84.94 Aligned_cols=83 Identities=17% Similarity=0.106 Sum_probs=58.1
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeee-------ccCCChhHHHHHHHhc------CCCeEEEcceecCCCCccccc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGT-------GRLEDKNSLLDDMKRV------RPTHVLNAAGITGRPNVDWCE 439 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~-------~d~~d~~~~~~~~~~~------~~d~Vih~a~~~~~~~~~~~~ 439 (684)
.||||||++-||.++++.|+++|++|.... .|+.+.+......... ..|.++++|+... ..
T Consensus 3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~------~~ 76 (257)
T d1fjha_ 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP------QT 76 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT------TC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCC------cH
Confidence 579999999999999999999999984432 3555555544443221 4799999998551 22
Q ss_pred cchhhHhhhchhhhHHHHHHHH
Q 035631 440 SHRVETIRTNVMGTLTLADVCK 461 (684)
Q Consensus 440 ~~~~~~~~~nv~~~~~ll~~~~ 461 (684)
........+|..+...+.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ 98 (257)
T d1fjha_ 77 KVLGNVVSVNYFGATELMDAFL 98 (257)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556677777777766654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.93 E-value=2.8e-05 Score=65.42 Aligned_cols=117 Identities=18% Similarity=0.111 Sum_probs=79.4
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHF 93 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (684)
||.|+||+|.+|++++-.|..++---+++.+|.+........+..... ......-+ ......+.+ .++|+||-+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~---~~~~~~~~-~~~~~~~~~--~~aDivVit 75 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET---RATVKGYL-GPEQLPDCL--KGCDVVVIP 75 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS---SCEEEEEE-SGGGHHHHH--TTCSEEEEC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhh---hcCCCeEE-cCCChHHHh--CCCCEEEEC
Confidence 799999999999999999988854458899988653332223322111 11112122 233333445 799999999
Q ss_pred CccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 94 AAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
||.... ..++..+.++.|+...+.+++.+.+.++-..++.+|.
T Consensus 76 ag~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN 118 (144)
T d1mlda1 76 AGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (144)
T ss_dssp CSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCcCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 996432 2345667899999999999999999886566666553
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=9.6e-05 Score=62.11 Aligned_cols=117 Identities=18% Similarity=0.092 Sum_probs=76.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhc-CCCcEEEEEcCCCccc-ccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKN-YPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~-~~g~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|||.|+|++|.+|++++-.|..+ +...++..++..+... ..-++...........+ ..-.+.+ .+ .+.|+|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~----~~--~~aDvv 73 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDATP----AL--EGADVV 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCCHH----HH--TTCSEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCCcc----cc--CCCCEE
Confidence 68999999999999999877544 4467999998753210 00111111111112221 1222222 23 689999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
|-+||...- ...+..+.++.|..-.+.+.+.+.+.++...+|.+|.
T Consensus 74 vitaG~~~k--~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 74 LISAGVRRK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp EECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EECCCccCC--CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 999997532 2345667889999999999999999876666776663
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.71 E-value=0.00015 Score=60.87 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=75.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc----cCCC--CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK----NLHP--SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
|||.|+||+|.+|+.++-.|..++--.++..+++.....+.+ .+.. .......+....--.+. +.+ .+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l--~~ 74 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RII--DE 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGG--TT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHh--cc
Confidence 689999999999999999999884335999998864322111 1111 11122333322211122 223 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHV 136 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~ 136 (684)
+|+||-+||.... ...+..+.+..|..-.+.++....+.++ +.++.+
T Consensus 75 aDvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~-~~iivV 121 (145)
T d1hyea1 75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICD-TKIFVI 121 (145)
T ss_dssp CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEC
T ss_pred ceEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCC-CeEEEE
Confidence 9999999996432 2246778899999999999999988873 455544
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.70 E-value=5.2e-05 Score=63.19 Aligned_cols=73 Identities=21% Similarity=0.231 Sum_probs=57.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+|+|+|+ |.+|+.+++.|.+. |++|+++++++ +..+.+.. .-+..++.+|..+.+.+.++- -.++|.++-
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid~d~--~~~~~~~~---~~~~~vi~Gd~~~~~~l~~~~-i~~a~~vv~ 71 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDK--DICKKASA---EIDALVINGDCTKIKTLEDAG-IEDADMYIA 71 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHH---HCSSEEEESCTTSHHHHHHTT-TTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCCcceecCCh--hhhhhhhh---hhhhhhccCcccchhhhhhcC-hhhhhhhcc
Confidence 78999996 99999999999999 89999999864 22222211 125788999999999998873 268999886
Q ss_pred cC
Q 035631 93 FA 94 (684)
Q Consensus 93 ~a 94 (684)
+.
T Consensus 72 ~t 73 (132)
T d1lssa_ 72 VT 73 (132)
T ss_dssp CC
T ss_pred cC
Confidence 43
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.67 E-value=6.4e-05 Score=63.38 Aligned_cols=116 Identities=15% Similarity=0.167 Sum_probs=73.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCC-CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHP-SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
..+|||.|.|+ |++|+.++-.|+.++-..+++.+|+++...+ ..++.. ...........+|+. .+ .+
T Consensus 3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~--~~ 72 (146)
T d1ez4a1 3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DC--KD 72 (146)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GG--TT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------Hh--cc
Confidence 34589999995 9999999999999854469999998642111 011111 011123344455542 23 69
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+|+||.+||....+ ..+..+.+..|+.-.+.+.+.+.+.++-..+|.+|
T Consensus 73 adivvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 73 ADLVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp CSEEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 99999999865422 24455778899999999999999987555555544
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.65 E-value=0.00017 Score=60.45 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=56.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcC--CCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNY--PDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~--~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
|+||.|.||||++|+.+++.|+++. +-.+++.+.++.+...... .. .-.....++.+.+. + .++|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~----~~--~~~~~~~~~~~~~~----~--~~~Di 68 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS----FG--GTTGTLQDAFDLEA----L--KALDI 68 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG----GG--TCCCBCEETTCHHH----H--HTCSE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc----cc--CCceeeecccchhh----h--hcCcE
Confidence 4689999999999999999988763 2457777766532221100 00 11112223334332 2 58899
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEeC
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-RFIHVST 138 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~i~~SS 138 (684)
+|.+++. ..++.+...+.+.| ++ .+|=.||
T Consensus 69 vF~a~~~------------------~~s~~~~~~~~~~g-~~~~VID~Ss 99 (146)
T d1t4ba1 69 IVTCQGG------------------DYTNEIYPKLRESG-WQGYWIDAAS 99 (146)
T ss_dssp EEECSCH------------------HHHHHHHHHHHHTT-CCCEEEECSS
T ss_pred EEEecCc------------------hHHHHhhHHHHhcC-CCeecccCCc
Confidence 9987752 12456666666766 32 3444444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.56 E-value=0.00027 Score=59.71 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=78.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCC--CCCCCCceEEEecCCCHHHHHHhhccCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHP--SRASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
..+||.|+|| |++|+.++-.|+.++...++..+|+.+.... ..++.. ......+.+...|. +.+ .+
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l--~d 74 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDC--RD 74 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGT--TT
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHh--cc
Confidence 4579999996 9999999999999855569999998643211 111111 11122344444443 223 68
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+|+||.++|....+ .....+.+..|..-.+.+.+.+.+.++-..+|.+|
T Consensus 75 aDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 75 ADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp CSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred ceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 99999999965322 24455778899999999999998887666666655
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.50 E-value=0.00031 Score=58.73 Aligned_cols=113 Identities=16% Similarity=0.185 Sum_probs=73.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCC-CCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPS-RASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
+||.|+|+ |.+|+.++-.|+.++...++..+|+...... ..++... ..........+|. +.+ .++|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-------~~~--~~adi 71 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY-------SDV--KDCDV 71 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG-------GGG--TTCSE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH-------HHh--CCCce
Confidence 58999997 9999999999999865569999998753221 1112211 1112233322222 223 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
|+-+||.... ...+..+.+..|..-.+.+++.+.+.++-..+|.+|
T Consensus 72 vvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 72 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred EEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 9999996532 235677889999999999999999987555566554
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.49 E-value=0.00027 Score=59.18 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=64.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeeccC----------------------CChhHHHHHHHhcCCCeEEEcceec
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL----------------------EDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~----------------------~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
||.|+||+|.+|+.++-.|..+|.-=++.-.|+ .......+.+++. |+||.+||..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~a--DivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGC--DVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTC--SEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCC--CEEEECCCcC
Confidence 899999999999999999998886211111121 1234445667777 9999999954
Q ss_pred CCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 431 GRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
........+.++.|+...+.+++.+.+++.+
T Consensus 80 -----~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~ 110 (144)
T d1mlda1 80 -----RKPGMTRDDLFNTNATIVATLTAACAQHCPD 110 (144)
T ss_dssp -----CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred -----CCCCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence 2234567788999999999999999998754
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.46 E-value=0.00043 Score=57.65 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=78.3
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc----ccCCC-CCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL----KNLHP-SRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
||.|+||+|.+|+.++-.|..++..-++..++........ .++.. .......+...+|. + .+ .++|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~--~~aD 72 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DT--AGSD 72 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GG--TTCS
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----Hh--hhcC
Confidence 7999999999999999999999655589999864322111 11111 01123344444443 2 13 6999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+|+-+||.... ..++..+.++.|..-.+.+.+...+.++-..++.+|
T Consensus 73 iVvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 73 VVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred EEEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 99999996432 235677899999999999999999987556666654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.0004 Score=58.18 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=62.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc-C--CeEeeeeccCCC-----------------------hhHHHHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK-G--IAFEFGTGRLED-----------------------KNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~-g--~~v~~~~~d~~d-----------------------~~~~~~~~~~~~~d~Vih 425 (684)
|||.|+|++|.+|+.++-.|..+ + .++.++ |+.+ .... +.+++. |+||-
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~--D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~a--Dvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLY--DIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGA--DVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEE--CSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTC--SEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEe--cccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCC--CEEEE
Confidence 79999999999999998877644 4 344332 3211 1111 235556 99999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe--EEEEe
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNFA 471 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~i~~S 471 (684)
+||.. ........+....|..-...+.+.+.+++.+ +|.+|
T Consensus 76 taG~~-----~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 76 SAGVR-----RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp CCSCC-----CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCcc-----CCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 99954 2234567788999999999999999998653 44443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.36 E-value=0.00069 Score=58.71 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=75.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcC-----CCcEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNY-----PDYEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~-----~g~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
..||.|+||+|.||++++-.|.+.. ....+..++..........+. ..........+..- .+ ..+.+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~---~~~~~- 98 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-ID---PYEVF- 98 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SC---HHHHT-
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-cc---chhhc-
Confidence 3589999999999999999998751 123666777644322222111 01111222222221 11 22445
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEe
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ-VKRFIHVS 137 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~i~~S 137 (684)
.+.|+||-++|... .......+.+..|..-.+.+.+++.+..+ -.+++.+|
T Consensus 99 -~~aDvVvi~ag~~r--kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 99 -EDVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp -TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -cCCceEEEeeccCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 79999999998743 34467788999999999999999998643 34555554
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.29 E-value=0.00011 Score=61.70 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=53.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC-CeE---eeee-------------ccCCChhHH-HHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG-IAF---EFGT-------------GRLEDKNSL-LDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g-~~v---~~~~-------------~d~~d~~~~-~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
.||.|.||||++|+.+++.|+++. +.+ ..+. .++...+.. ...++++ |++|.+++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~--DivF~a~~~~--- 76 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKAL--DIIVTCQGGD--- 76 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTC--SEEEECSCHH---
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcC--cEEEEecCch---
Confidence 389999999999999999887763 322 1110 111111111 1235666 9999888622
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceeee
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYE 477 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~ 477 (684)
....++..+.+.+++.++++.++.|-
T Consensus 77 ------------------~s~~~~~~~~~~g~~~~VID~Ss~fR 102 (146)
T d1t4ba1 77 ------------------YTNEIYPKLRESGWQGYWIDAASSLR 102 (146)
T ss_dssp ------------------HHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred ------------------HHHHhhHHHHhcCCCeecccCCcccc
Confidence 14456777788888878888887775
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.28 E-value=0.0002 Score=61.18 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=65.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCe-----E--eeeec-----------------------cCCChhHHHHHHHhcC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIA-----F--EFGTG-----------------------RLEDKNSLLDDMKRVR 419 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~-----v--~~~~~-----------------------d~~d~~~~~~~~~~~~ 419 (684)
..|||.|+||+|++|++++-.|+..+.- + ..+.. .........+.+++.
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a- 81 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA- 81 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccc-
Confidence 4689999999999999999999877641 1 11100 011222234556666
Q ss_pred CCeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC---CeEEEEe
Q 035631 420 PTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN---VLLMNFA 471 (684)
Q Consensus 420 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~i~~S 471 (684)
|+||-+||.. ........+.+..|+.-...+.+.+.++. +.++.+|
T Consensus 82 -dvViitaG~~-----~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 82 -DYALLVGAAP-----RKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp -SEEEECCCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -cEEEeecCcC-----CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 9999999955 22345677888899999999999999863 2344454
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.23 E-value=0.0014 Score=54.85 Aligned_cols=114 Identities=19% Similarity=0.080 Sum_probs=76.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC--CCC--CCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH--PSR--ASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~--~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
|||.|+|| |.+|+.++..|+..+-..++..+|+++.......+. ... .....++...+ +. +.+ .++|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~--~dad 71 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADT--ANSD 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGG--TTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHh--cCCe
Confidence 68999996 999999999999985446999999875432221111 100 11223333222 12 223 7999
Q ss_pred EEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 89 TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 89 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+|+-+||...- ......+.++.|..-.+.+++.+.+.++-..++.+|
T Consensus 72 vvvitag~~~~--~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1guza1 72 IVIITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (142)
T ss_dssp EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEEEEEecCCC--CCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence 99999996432 224567888999999999999999887555555544
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.23 E-value=0.001 Score=55.42 Aligned_cols=113 Identities=19% Similarity=0.124 Sum_probs=76.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCC--C-CCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~--~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
|||.|.|+ |.+|+.++-.|+.++-..++..+|+++.......+. . ............|. +.+ .++|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~--~~adi 70 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADL--KGSDV 70 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGG--TTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHh--cCCCE
Confidence 68999996 999999999998885556999999864222111111 0 00112334433332 223 78999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
||-+||.... ......+.+..|..-.+.+++...+.++-..++.+|
T Consensus 71 vvitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 71 VIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence 9999997542 234566788999999999999999988555555544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.18 E-value=0.00044 Score=58.70 Aligned_cols=117 Identities=18% Similarity=0.088 Sum_probs=72.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCC--CCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSR--ASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
++||.|.|+ |.+|+.++-.|...+- .+++++|.++..... ..+.... ..........+ + .++.+ .++
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~-~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~---~~~~~--~~a 77 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--S---YEAAL--TGA 77 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--S---HHHHH--TTC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCC-ceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--c---hhhhh--cCC
Confidence 479999997 9999999988877732 389999876421111 1110000 01111111111 1 12334 799
Q ss_pred CEEEEcCccCCcCC---CCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 88 DTIMHFAAQTHVDN---SFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 88 d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
|+|+-++|....+. ......+.+..|..-.+.+++.+.+.++-..++.+|
T Consensus 78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999998754322 112455678899999999999999988555555554
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.17 E-value=0.00072 Score=56.69 Aligned_cols=91 Identities=19% Similarity=0.187 Sum_probs=56.7
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH------HH----------------HHHHhcCCCeEEE
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS------LL----------------DDMKRVRPTHVLN 425 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~------~~----------------~~~~~~~~d~Vih 425 (684)
|..+|||.|+|+ |++|..++..|+.+|.--+++-.|+..... +. +.++++ |+||.
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~a--divvi 78 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDA--DLVVI 78 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTC--SEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccc--cEEEE
Confidence 345679999995 999999999999998522222233321100 00 113344 89999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
+|+.. ........+....|+.-...+++.+.+++.+
T Consensus 79 tag~~-----~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~ 114 (146)
T d1ez4a1 79 TAGAP-----QKPGESRLDLVNKNLNILSSIVKPVVDSGFD 114 (146)
T ss_dssp CCCC---------------CHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecccc-----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99854 2224556678888999999999999998765
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.16 E-value=0.0025 Score=53.01 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=56.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcC--CCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNY--PDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~--~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|||.|.||||++|+.|++.|+++. +..++..++.+....+... ...... ...+..+.+. + .++|+|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~----~~~~~~--~~~~~~~~~~----~--~~~Dvv 68 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN----FGKDAG--MLHDAFDIES----L--KQLDAV 68 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC----SSSCCC--BCEETTCHHH----H--TTCSEE
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc----cCCcce--eeecccchhh----h--ccccEE
Confidence 689999999999999999998742 2346666554432222111 111111 1122333332 3 688999
Q ss_pred EEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc
Q 035631 91 MHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE 140 (684)
Q Consensus 91 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~ 140 (684)
|-+.... -+..+...+.+.|....+|=.|+..
T Consensus 69 F~alp~~------------------~s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 69 ITCQGGS------------------YTEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred EEecCch------------------HHHHHhHHHHHcCCceEEEeCCccc
Confidence 9776521 1345666666666222466666643
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.12 E-value=0.0014 Score=54.54 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=76.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc--cCCCCC-CCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK--NLHPSR-ASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~--~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
.||.|+|+ |.+|++++-.|+.++-..+++.+|+++...+.. ++.... ......+...+ +.+ .+ .++|+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~--~daDv 72 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----IC--RDADM 72 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GG--TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----Hh--hCCcE
Confidence 58999996 999999999999985556999999865322111 111110 11223333332 112 23 68999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
||-+||.... ......+.+..|..-.+.+...+.+.++-..+|.+|
T Consensus 73 VVitaG~~~~--~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 73 VVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEecccccC--CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999997532 235667889999999999999999987555666555
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.10 E-value=0.00036 Score=58.53 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=28.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcC-CCcEEEEEcCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNY-PDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~-~g~~V~~~~r~ 47 (684)
+|||.|.||||++|+.+++.|.+++ +..++..+..+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 5789999999999999999997653 35677766543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.07 E-value=0.0013 Score=55.00 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=61.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC--eEeeeeccCCC-hh-------HHH--------------------HHHHhcCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI--AFEFGTGRLED-KN-------SLL--------------------DDMKRVRPT 421 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~--~v~~~~~d~~d-~~-------~~~--------------------~~~~~~~~d 421 (684)
|||.|+||+|.+|+.++-.|+.+|. ++.++ |+.. .+ ++. +.+++ -|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~--D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~--aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLI--GREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDE--SD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEE--ECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTT--CS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccc--cchhhhHhhhcccccchhcccccccCCccccCCcchHHHhcc--ce
Confidence 7999999999999999999999985 44333 3221 00 011 12233 38
Q ss_pred eEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEE
Q 035631 422 HVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNF 470 (684)
Q Consensus 422 ~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~ 470 (684)
+||-+||.. ........+.++.|..-...+++.+.+++-+.|++
T Consensus 77 vVVitAG~~-----~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iiv 120 (145)
T d1hyea1 77 VVIITSGVP-----RKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFV 120 (145)
T ss_dssp EEEECCSCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEEEecccc-----cCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEE
Confidence 899999854 22234567888999999999999999886443333
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.001 Score=52.59 Aligned_cols=71 Identities=14% Similarity=0.230 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
...||.|.| +|.+|+-++....+. |++|++++.++..+... ---+++.+|+.|.+.+.++....++|+|
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~l--G~~v~v~d~~~~~PA~~--------va~~~i~~~~~d~~~l~~~~~~~~~Dvi 78 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRL--GVEVIAVDRYADAPAMH--------VAHRSHVINMLDGDALRRVVELEKPHYI 78 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTT--TCEEEEEESSTTCGGGG--------GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHC--CCEEEEEcCCCCCchhh--------cCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence 456899999 799999999999999 99999999865321110 1236788999999999888766689999
Q ss_pred EE
Q 035631 91 MH 92 (684)
Q Consensus 91 ih 92 (684)
-.
T Consensus 79 T~ 80 (111)
T d1kjqa2 79 VP 80 (111)
T ss_dssp EE
T ss_pred EE
Confidence 73
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.01 E-value=0.00061 Score=59.86 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=54.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.|+|+|.|| |++|+++++.|.++ |++|++++|+.. +...+... .........+..+.......+ ...|.++
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~v~dr~~~--~a~~l~~~--~~~~~~~~~~~~~~~~~~~~i--~~~~~~i 72 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVTVACRTLE--SAKKLSAG--VQHSTPISLDVNDDAALDAEV--AKHDLVI 72 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTT--TCEEEEEESCHH--HHHHHHTT--CTTEEEEECCTTCHHHHHHHH--TTSSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECChH--HHHHHHhc--ccccccccccccchhhhHhhh--hccceeE
Confidence 379999986 99999999999999 899999999752 33333221 233445556666777777777 6788888
Q ss_pred EcCc
Q 035631 92 HFAA 95 (684)
Q Consensus 92 h~a~ 95 (684)
.+..
T Consensus 73 ~~~~ 76 (182)
T d1e5qa1 73 SLIP 76 (182)
T ss_dssp ECSC
T ss_pred eecc
Confidence 6543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.99 E-value=0.00049 Score=57.00 Aligned_cols=42 Identities=26% Similarity=0.318 Sum_probs=33.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE-------------------eeeeccCCChhHHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF-------------------EFGTGRLEDKNSLLDD 414 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~d~~d~~~~~~~ 414 (684)
|||+|+|+ |.+|..+++.|.++|++| ..+.+|.+|.+.+.++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA 61 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhc
Confidence 79999996 999999999999999987 4455666666666554
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.95 E-value=0.0024 Score=54.11 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccc--ccCCCCC--CCCCceEEEecCCCHHHHHHhhccCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSL--KNLHPSR--ASPNFKFLKGDITCADLMNYLLVSEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 86 (684)
+.+||.|.|+ |.+|+.++-.|..++.--+++.+|+++..... .++.... .........+|. + .+ .+
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~----~~--~~ 88 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---S----VT--AN 88 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---G----GG--TT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---h----hc--cc
Confidence 4579999996 99999999999999544599999986422111 1111111 111122222232 2 13 79
Q ss_pred CCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 87 IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 87 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+|+||..||....+ .++..+.+..|..-.+.+.....+.++-..+|.+|
T Consensus 89 adiVVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 89 SKIVVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp CSEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccEEEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999999975432 24566788999999999999999887555666665
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.94 E-value=0.00071 Score=57.55 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=45.0
Q ss_pred ccccCCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcce
Q 035631 365 EICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 365 ~~~~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
++-+..++||.|+||.|.+|+.+++.|.++||+|..+. .......+..+.+. |.++.+..
T Consensus 3 ~~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d--~~~~~~~~~~~~~~--~~v~~~~~ 62 (152)
T d2pv7a2 3 KTINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILD--REDWAVAESILANA--DVVIVSVP 62 (152)
T ss_dssp CCSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEEC--TTCGGGHHHHHTTC--SEEEECSC
T ss_pred cccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecc--cccccccchhhhhc--cccccccc
Confidence 33344456999999999999999999999999998764 44445555566665 88776654
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.92 E-value=0.0015 Score=55.51 Aligned_cols=118 Identities=16% Similarity=0.068 Sum_probs=71.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCC-C----cEEEEEcCCCcccccccCC---CCCCCCCceEEEecCCCHHHHHHhhc
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYP-D----YEIVALDKLDYCSSLKNLH---PSRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~-g----~~V~~~~r~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+||.|+||+|++|++++-.|..... + .....++-.........+. ..........+...-.+. +.+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 78 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VAF- 78 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HHT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----hhc-
Confidence 36999999999999999999987631 1 1122222211111111110 011122333333332222 334
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEe
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ-VKRFIHVS 137 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~i~~S 137 (684)
.++|+||-++|... ....+..+.+..|+.-.+.+.+.+.+..+ -..++.+|
T Consensus 79 -~~advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 -KDADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp -TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -ccccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 79999999999754 23356778899999999999999988542 24455555
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.90 E-value=0.0021 Score=53.08 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=55.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|+++|.| .|.+|+.+++.|.+. |++|++++.++ ...+.+. ......+.+|..+.+.+.++- ..++|.||=
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~--g~~vvvid~d~--~~~~~~~----~~~~~~~~gd~~~~~~l~~a~-i~~a~~vi~ 70 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRM--GHEVLAVDINE--EKVNAYA----SYATHAVIANATEENELLSLG-IRNFEYVIV 70 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHT--TCCCEEEESCH--HHHHHTT----TTCSEEEECCTTCTTHHHHHT-GGGCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCeEEEecCcH--HHHHHHH----HhCCcceeeecccchhhhccC-CccccEEEE
Confidence 5688998 599999999999999 89999999864 2333332 235678889999999988772 267898874
Q ss_pred cC
Q 035631 93 FA 94 (684)
Q Consensus 93 ~a 94 (684)
+.
T Consensus 71 ~~ 72 (134)
T d2hmva1 71 AI 72 (134)
T ss_dssp CC
T ss_pred Ec
Confidence 43
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.89 E-value=0.0022 Score=54.19 Aligned_cols=92 Identities=22% Similarity=0.224 Sum_probs=62.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCC-------------------------hhHHHHHHHhcCCCeEEE
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLED-------------------------KNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d-------------------------~~~~~~~~~~~~~d~Vih 425 (684)
++||.|+|+ |.+|+.++..|..++.. +..-.|+.. ....++.+++. |+|+-
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~a--diVvi 82 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGA--DCVIV 82 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTC--SEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCC--CeEEE
Confidence 459999996 99999999888888862 222233211 11223445566 89999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
+|+....|.-........+....|+.-...+++.+.+++.+
T Consensus 83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~ 123 (154)
T d1pzga1 83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 123 (154)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCC
Confidence 99865222211112356677888999999999999998765
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.88 E-value=0.00042 Score=57.85 Aligned_cols=82 Identities=11% Similarity=0.086 Sum_probs=50.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC-CeE---ee------------eecc-CCChh-HHHHHHHhcCCCeEEEcceecCCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG-IAF---EF------------GTGR-LEDKN-SLLDDMKRVRPTHVLNAAGITGRP 433 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g-~~v---~~------------~~~d-~~d~~-~~~~~~~~~~~d~Vih~a~~~~~~ 433 (684)
|||.|.|||||+|+.|++.|+++. |.+ .. +..+ ....+ .-...++++ |+||.+....
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~--DvvF~alp~~--- 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQL--DAVITCQGGS--- 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTC--SEEEECSCHH---
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccc--cEEEEecCch---
Confidence 799999999999999999887654 432 11 1111 11101 111335566 9999887622
Q ss_pred CccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecceee
Q 035631 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIY 476 (684)
Q Consensus 434 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy 476 (684)
-+..+...+.+.+.+.++++-++-|
T Consensus 76 ------------------~s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 76 ------------------YTEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp ------------------HHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred ------------------HHHHHhHHHHHcCCceEEEeCCccc
Confidence 1445677777888775555555445
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.87 E-value=0.00035 Score=58.59 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=24.1
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCe
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIA 397 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~ 397 (684)
+|+|.|.||||++|..|++.|.+++|.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP 28 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFP 28 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 479999999999999999999877763
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.86 E-value=0.0018 Score=56.02 Aligned_cols=92 Identities=11% Similarity=-0.015 Sum_probs=64.2
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCC-----eEeeeeccCCC-------------------------hhHHHHHHHhcCCCe
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGI-----AFEFGTGRLED-------------------------KNSLLDDMKRVRPTH 422 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~-----~v~~~~~d~~d-------------------------~~~~~~~~~~~~~d~ 422 (684)
||.|+||+|.||.+++-.|+..+. .+...-.|+.. .....+.+++. |+
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~a--Dv 103 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV--DW 103 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC--SE
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCC--ce
Confidence 899999999999999998876532 23333333321 11223445555 99
Q ss_pred EEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcC---CeEEEEe
Q 035631 423 VLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKN---VLLMNFA 471 (684)
Q Consensus 423 Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~i~~S 471 (684)
||-+||.. ........+.++.|+.-...+.+++.++. ++++++|
T Consensus 104 Vvi~ag~~-----rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 104 ALLIGAKP-----RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp EEECCCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEeeccC-----CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 99999854 33456777889999999999999999863 3555554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.83 E-value=0.0041 Score=51.59 Aligned_cols=113 Identities=18% Similarity=0.128 Sum_probs=74.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc--CCCC--CCCCCceEEE-ecCCCHHHHHHhhccCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN--LHPS--RASPNFKFLK-GDITCADLMNYLLVSEGI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--l~~~--~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~ 87 (684)
|||.|+|+ |.+|+.++-.|..++--.++..+|+++....... +... .......... .|+ +.+ .++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~--~~a 70 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLL--KGS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGG--TTC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHh--ccc
Confidence 68999996 9999999999998843458999998643211111 1100 0111223332 232 223 799
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
|+||-.||.... ......+.+..|..-.+.+.+.+.+.++-..++.+|
T Consensus 71 diVvitag~~~~--~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 71 EIIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp SEEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred cEEEEeccccCC--CCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 999999986432 234677888999999999999999987555555554
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.82 E-value=0.0012 Score=53.69 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=55.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVM 451 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~ 451 (684)
|||.|.|++|=.|+.+.+.+.++|+++... .|....+. +. ++|+||.+..+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~-id~~~~~~----~~--~~DVvIDFS~p~--------------------- 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK-VDVNGVEE----LD--SPDVVIDFSSPE--------------------- 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EETTEEEE----CS--CCSEEEECSCGG---------------------
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE-ECCCcHHH----hc--cCCEEEEecCHH---------------------
Confidence 799999999999999999999999987432 23322222 22 359999987632
Q ss_pred hhHHHHHHHHHcCCeEEEEecc
Q 035631 452 GTLTLADVCKEKNVLLMNFATG 473 (684)
Q Consensus 452 ~~~~ll~~~~~~~~~~i~~SS~ 473 (684)
++...++.|.++++++|.-+|.
T Consensus 53 ~~~~~l~~~~~~~~p~ViGTTG 74 (128)
T d1vm6a3 53 ALPKTVDLCKKYRAGLVLGTTA 74 (128)
T ss_dssp GHHHHHHHHHHHTCEEEECCCS
T ss_pred HHHHHHHHHHhcCCCEEEEcCC
Confidence 3677899999999987766654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.79 E-value=0.0029 Score=52.40 Aligned_cols=91 Identities=21% Similarity=0.149 Sum_probs=64.0
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChh-H-------HH----------------HHHHhcCCCeEEEcce
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKN-S-------LL----------------DDMKRVRPTHVLNAAG 428 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~-~-------~~----------------~~~~~~~~d~Vih~a~ 428 (684)
||.|+|++|.+|+.++-.|..++.--++.-.|+.+.+ . +. +.+++ -|+|+-+||
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~--aDiVvitaG 79 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAG--SDVVVITAG 79 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTT--CSEEEECCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhh--cCEEEEecc
Confidence 8999999999999999999999874444445542211 1 10 01233 488999988
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe--EEEE
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNF 470 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~i~~ 470 (684)
.. ........+.++.|..-...+.+.+.+++-+ ++.+
T Consensus 80 ~~-----~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivv 118 (142)
T d1o6za1 80 IP-----RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT 118 (142)
T ss_dssp CC-----CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred cc-----cccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 54 2223567788999999999999999998654 4444
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.72 E-value=0.0011 Score=56.35 Aligned_cols=117 Identities=13% Similarity=0.086 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccc--cccCCCCC--CCCCceEEEecCCCHHHHHHhhccC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS--LKNLHPSR--ASPNFKFLKGDITCADLMNYLLVSE 85 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (684)
+...||.|+|+ |.+|+.++-.|..++...+++.+|++..... ..++.... ..........|. + .+ .
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~--~ 86 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N----VS--A 86 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G----GG--T
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h----hh--c
Confidence 34568999995 9999999999999965569999998642211 11111111 111222222332 2 22 6
Q ss_pred CCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 86 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
++|+||-+||....+ ..+..+.++.|+.-.+.++....+.++-..++.+|-
T Consensus 87 ~adivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 87 NSKLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp TEEEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred cccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence 899999999875432 234446678899999999988888776566666653
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.72 E-value=0.0029 Score=53.06 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=62.4
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH------HH-----------------HHHHhcCCCeEEEc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS------LL-----------------DDMKRVRPTHVLNA 426 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~------~~-----------------~~~~~~~~d~Vih~ 426 (684)
...||.|+|+ |.+|+.++..|+.+|.--++.-.|+.+... +. +.+++. |+||.+
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~da--Dvvvit 81 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDA--DLVVIC 81 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTC--SEEEEC
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccc--eeEEEe
Confidence 3459999996 999999999999998732222333321100 00 123444 899999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe--EEEE
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNF 470 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~i~~ 470 (684)
|+.. ........+....|+.-...+++.+.+++.+ ++.+
T Consensus 82 ag~~-----~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv 122 (148)
T d1ldna1 82 AGAN-----QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (148)
T ss_dssp CSCC-----CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred cccc-----cccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence 9854 2234566678888999999999999998654 4444
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.72 E-value=0.00033 Score=61.53 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=27.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALD 45 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~ 45 (684)
|+||.|.||||++|+.|++.|.++. .+++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP-~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHP-HMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCC-CCceEeeE
Confidence 5799999999999999999998863 67776653
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.68 E-value=0.0015 Score=55.35 Aligned_cols=118 Identities=17% Similarity=0.117 Sum_probs=71.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcC-----CCcEEEEEcCCCcccccccCCC---CCCCCCceEEEecCCCHHHHHHhhc
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNY-----PDYEIVALDKLDYCSSLKNLHP---SRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~-----~g~~V~~~~r~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+||.|+||+|.+|++++-.|++.. ...+++.++.+......+.+.. .........+.+--. ..+.+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~- 77 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDK----EEIAF- 77 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESC----HHHHT-
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcc----ccccc-
Confidence 4699999999999999999998642 1235666666443333222211 011122222222111 12334
Q ss_pred cCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEe
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-RFIHVS 137 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~i~~S 137 (684)
.++|+||-++|.... ...+..+.+..|..-.+.+.....+..+.. .+|.+|
T Consensus 78 -~~~dvVVitag~~~~--~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 78 -KDLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp -TTCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -CCceEEEEecccCCC--CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 799999999997543 223455678999999999998887753233 445444
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.68 E-value=0.0025 Score=53.20 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=72.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc--cCCCC--CCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK--NLHPS--RASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~--~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
+||.|+|+ |.+|+.++-.|+.++-..+++.+|++....... .+... ...........|. + .+ .++|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~----~l--~~ad 71 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---A----AL--ADAD 71 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G----GG--TTCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---H----Hh--cccc
Confidence 78999995 999999999999985445999999864321111 11100 1112233333332 2 23 7999
Q ss_pred EEEEcCccCCcCCC--CCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 89 TIMHFAAQTHVDNS--FGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 89 ~Vih~a~~~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
+||-+||....... ..+..+.++.|..-.+.+.+..++.++-..+|.+|
T Consensus 72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 122 (146)
T d1hyha1 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (146)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence 99999996432111 11223467889999999999999987555566554
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.62 E-value=0.0054 Score=51.02 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=59.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC--eEeeeeccCCChhHH------------------------HHHHHhcCCCeEEE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI--AFEFGTGRLEDKNSL------------------------LDDMKRVRPTHVLN 425 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~--~v~~~~~d~~d~~~~------------------------~~~~~~~~~d~Vih 425 (684)
|||.|+|+ |.+|..++..|+.+|. ++.+ .|+.+.... .+.+++. |+|+-
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L--~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~da--dvvvi 75 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVL--LDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANS--DIVII 75 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEE--ECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTC--SEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEE--eccccccchhhhhhhhcccchhcccceEEecCCHHHhcCC--eEEEE
Confidence 79999996 9999999999999884 4432 232211000 0123444 89999
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
+||.. ........+..+.|+.-...+++.+.+++.+
T Consensus 76 tag~~-----~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~ 111 (142)
T d1guza1 76 TAGLP-----RKPGMTREDLLMKNAGIVKEVTDNIMKHSKN 111 (142)
T ss_dssp CCSCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEecC-----CCCCCchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 99854 2233556788889999999999999998654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.61 E-value=0.0048 Score=50.04 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=50.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|||.|.|++|-+|+.+.+.+.++ ++++++. +++. . ..+ .++|+||
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~~~--------------------~----------~~~--~~~DVvI 46 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDVNG--------------------V----------EEL--DSPDVVI 46 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEETTE--------------------E----------EEC--SCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECCCc--------------------H----------HHh--ccCCEEE
Confidence 68999999999999999888877 7777644 2211 0 112 5789999
Q ss_pred EcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 92 HFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 92 h~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
.+..+. ++..+++.|.+++ ..+|.-+|
T Consensus 47 DFS~p~------------------~~~~~l~~~~~~~--~p~ViGTT 73 (128)
T d1vm6a3 47 DFSSPE------------------ALPKTVDLCKKYR--AGLVLGTT 73 (128)
T ss_dssp ECSCGG------------------GHHHHHHHHHHHT--CEEEECCC
T ss_pred EecCHH------------------HHHHHHHHHHhcC--CCEEEEcC
Confidence 876542 2467888888877 56665444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.59 E-value=0.0013 Score=56.77 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=31.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCc
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY 49 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~ 49 (684)
|||+|+|+ |.+|+.++..|.+. |++|..++|...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~--G~~V~~~~r~~~ 34 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQ--GHEVQGWLRVPQ 34 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred CEEEEECc-CHHHHHHHHHHHHC--CCceEEEEcCHH
Confidence 79999997 99999999999999 899999999753
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.59 E-value=0.002 Score=54.58 Aligned_cols=38 Identities=32% Similarity=0.447 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+.+++||.|.||.|.+|+.+++.|.++ ||+|.+.+|..
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~ 43 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDRED 43 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTC
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEeccccc
Confidence 345689999999999999999999999 89999999864
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.55 E-value=0.00075 Score=60.44 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL 405 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~ 405 (684)
|||.|+||+|.+|+.|++.|+++||+|.+..+|-
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7999999999999999999999999998876553
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.54 E-value=0.0059 Score=51.55 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=65.7
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHH-----------------------HHHHHhcCCCeEE
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSL-----------------------LDDMKRVRPTHVL 424 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~-----------------------~~~~~~~~~d~Vi 424 (684)
-.++.||.|+|+ |.+|+.++-.|..+|.-=+++-.|+...... .+.+++. |+|+
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~a--diVV 93 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANS--KIVV 93 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTC--SEEE
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccc--cEEE
Confidence 334569999995 9999999999999998433333443211110 0123444 8999
Q ss_pred EcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe--EEEEe
Q 035631 425 NAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNFA 471 (684)
Q Consensus 425 h~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~i~~S 471 (684)
..||.. ....+...+..+.|+.-...++..+.+.+.+ ++.+|
T Consensus 94 itAg~~-----~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 94 VTAGVR-----QQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp ECCSCC-----CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EecCCc-----cccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999954 2234566788889999999999999998654 55443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.53 E-value=0.001 Score=59.52 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=31.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|+||+|.+|++|++.|+++ |++|++.+|++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 68999999999999999999999 99999999964
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.49 E-value=0.0059 Score=50.54 Aligned_cols=87 Identities=22% Similarity=0.161 Sum_probs=59.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHH----------------------HHHHHhcCCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSL----------------------LDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~----------------------~~~~~~~~~d~Vih~a~~ 429 (684)
|||.|+|+ |.+|+.++-.|+.++.--++.-.|+.+.... .+.+++. |+|+-+|+.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 77 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGS--DVVIVAAGV 77 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTC--SEEEECCCC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCC--CEEEEeccc
Confidence 79999996 9999999999998886323333333211100 1124455 899999985
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
. ........+.+..|+.-...+++.+.+++.+
T Consensus 78 ~-----~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~ 109 (140)
T d1a5za1 78 P-----QKPGETRLQLLGRNARVMKEIARNVSKYAPD 109 (140)
T ss_dssp C-----CCSSCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred c-----cCCCcchhhhhccccchHHHHHHHHHhcCCC
Confidence 4 2234556677888999999999999998654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.44 E-value=0.0019 Score=56.44 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=26.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcC-CeEeee
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKG-IAFEFG 401 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g-~~v~~~ 401 (684)
||||.|.|||||+|..|++.|.++. .++..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence 5799999999999999999999984 455443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.40 E-value=0.0022 Score=56.27 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEE-ecCCCHHHHHHhhccCCCCE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK-GDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~d~ 89 (684)
.+.+|||+||+|-+|+..++..... |.+|+++++++. +.+.+... .--+.+. -|-...+...+.....++|+
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~--~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~ 101 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDE--KIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDC 101 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHH--HHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCce
Confidence 3579999999999999999999888 899999998642 22222211 1112222 23333344555556678999
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccC
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~ 144 (684)
||++.|.. .....++.++.. .+++.++....|+.
T Consensus 102 v~D~vG~~------------------~~~~~~~~l~~~---G~~v~~G~~~~~~~ 135 (182)
T d1v3va2 102 YFDNVGGE------------------FLNTVLSQMKDF---GKIAICGAISVYNR 135 (182)
T ss_dssp EEESSCHH------------------HHHHHGGGEEEE---EEEEECCCGGGTTC
T ss_pred eEEecCch------------------hhhhhhhhccCC---CeEEeecceeeccc
Confidence 99998731 122344444443 57887777666543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.39 E-value=0.0069 Score=50.18 Aligned_cols=87 Identities=16% Similarity=0.097 Sum_probs=59.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH------H------------------HHHHHhcCCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS------L------------------LDDMKRVRPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~------~------------------~~~~~~~~~d~Vih~a 427 (684)
|||.|+|+ |.+|..++-.|+.+|.-=++.-.|+.+... + .+.+++. |+||-.|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~a--diVvita 77 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGS--EIIVVTA 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTC--SEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccc--cEEEEec
Confidence 79999995 999999999999888532233334321110 0 0123344 8888888
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
+.. ........+..+.|..-...+++.+.+++.+
T Consensus 78 g~~-----~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~ 111 (142)
T d1ojua1 78 GLA-----RKPGMTRLDLAHKNAGIIKDIAKKIVENAPE 111 (142)
T ss_dssp CCC-----CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred ccc-----CCCCCchHHHHHHhhHHHHHHHHHHHhhCCC
Confidence 844 2234566788888999999999999998654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.22 E-value=0.0038 Score=52.32 Aligned_cols=116 Identities=19% Similarity=0.127 Sum_probs=73.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccc--cCCCCC--CCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLK--NLHPSR--ASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~--~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
++||.|.|+ |.+|+.++-.|...+- .++..+|++....... .+.... ......+...+ +. +.+ .+.
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l-~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~--~~a 72 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDL--AGA 72 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGG--TTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----ccc--CCC
Confidence 468999995 9999999987776642 4899999865322111 111100 11122333222 11 223 689
Q ss_pred CEEEEcCccCCcCC---CCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 88 DTIMHFAAQTHVDN---SFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 88 d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
|+||-+++....+. ...+..+.+..|..-.+.+.+.+++.++-..++.+|
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999999654321 112355778999999999999999988555556554
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.22 E-value=0.0053 Score=51.89 Aligned_cols=86 Identities=10% Similarity=0.010 Sum_probs=59.5
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCC-----eEeeeeccCCChh-------------------------HHHHHHHhcCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGI-----AFEFGTGRLEDKN-------------------------SLLDDMKRVRP 420 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~-----~v~~~~~d~~d~~-------------------------~~~~~~~~~~~ 420 (684)
.|||.|+||+|.+|.+++-.|+..+. .+...-.|+.... ...+.+++.
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDL-- 80 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTC--
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCc--
Confidence 57999999999999999998876542 2333333332111 122344555
Q ss_pred CeEEEcceecCCCCccccccchhhHhhhchhhhHHHHHHHHHc
Q 035631 421 THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEK 463 (684)
Q Consensus 421 d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 463 (684)
|+||-+||.. ........+.++.|..-...+.+.+.++
T Consensus 81 dvVVitag~~-----~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 81 DVAILVGSMP-----RRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp SEEEECCSCC-----CCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccC-----CCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 9999999855 2234556677889999999999999876
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.22 E-value=0.0099 Score=51.57 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=27.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
++|+|.|+ |++|.+++++|.++||+|+++..+
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~ 34 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT 34 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC
Confidence 48999985 999999999999999999666554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.12 E-value=0.011 Score=48.87 Aligned_cols=112 Identities=21% Similarity=0.143 Sum_probs=68.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc--CCCCC--CCCCceEEE-ecCCCHHHHHHhhccCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN--LHPSR--ASPNFKFLK-GDITCADLMNYLLVSEGI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--l~~~~--~~~~~~~~~-~Dl~d~~~~~~~~~~~~~ 87 (684)
+||.|+|+ |.+|..++-.|..++ -.+++.++.+........ +.... ......+.. .|. + .+ .+.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~----~~--~~a 70 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY---A----DT--ANS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG---G----GG--TTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-cceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH---H----Hh--cCC
Confidence 68999996 999999999888873 248999998653211111 11000 011222322 232 1 12 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
|+||-+||....+ .....+.+..|..-.+.++....+.++-..++.+|
T Consensus 71 dvvvitag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 71 DVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp SEEEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred CEEEEeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence 9999999965421 23445677899999999999999987555555544
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.07 E-value=0.0045 Score=52.28 Aligned_cols=94 Identities=18% Similarity=0.116 Sum_probs=61.7
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH------HH-----------------HHHHhcCCCeEEE
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS------LL-----------------DDMKRVRPTHVLN 425 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~------~~-----------------~~~~~~~~d~Vih 425 (684)
+++.||.|+|+ |.||+.++-.|..+|.--+++-.|+..... +. +.+.+. |+||-
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~a--divvi 93 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANS--KLVII 93 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTE--EEEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccc--cEEEE
Confidence 34569999995 999999999999998733333334321110 00 113344 78888
Q ss_pred cceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe--EEEE
Q 035631 426 AAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNF 470 (684)
Q Consensus 426 ~a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~i~~ 470 (684)
+||.. ........+.++.|+.-...++..+.+++.+ ++.+
T Consensus 94 tag~~-----~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivv 135 (159)
T d2ldxa1 94 TAGAR-----MVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV 135 (159)
T ss_dssp CCSCC-----CCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEEC
T ss_pred ecccc-----cCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 88844 2234556677888999899999888887654 4444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.04 E-value=0.013 Score=48.47 Aligned_cols=86 Identities=17% Similarity=0.153 Sum_probs=60.4
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH------HH-----------------HHHHhcCCCeEEEccee
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS------LL-----------------DDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~------~~-----------------~~~~~~~~d~Vih~a~~ 429 (684)
||.|+|+ |.+|+.++..|..+|.--+++-.|+..... +. +.+++. |+||-+||.
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~da--DvVVitaG~ 79 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDA--DMVVITAGP 79 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTC--SEEEECCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCC--cEEEEeccc
Confidence 8999996 999999999999998733333344322110 00 123344 899999985
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
. ........+..+.|+.-...++..+.+++.+
T Consensus 80 ~-----~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ 111 (143)
T d1llda1 80 R-----QKPGQSRLELVGATVNILKAIMPNLVKVAPN 111 (143)
T ss_dssp C-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred c-----cCCCCchhhhhhhhHHHHHHHHHHHHhhCCC
Confidence 4 2234566688899999999999999998654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.013 Score=52.73 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC----------------CchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCC
Q 035631 10 YKPKKILITGA----------------AGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73 (684)
Q Consensus 10 ~~~~~VlItGa----------------tG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~ 73 (684)
+.+++||||+| ||.+|.+|++++..+ |++|+.+.-..+ .....++..+.. .
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~--Ga~V~li~g~~~---------~~~p~~~~~~~~--~ 70 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS---------LPTPPFVKRVDV--M 70 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC---------CCCCTTEEEEEC--C
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc--CCchhhhhcccc---------cCccccccccee--h
Confidence 45789999976 899999999999999 899999976432 122345555544 3
Q ss_pred CHHHHHHhh--ccCCCCEEEEcCccCCc
Q 035631 74 CADLMNYLL--VSEGIDTIMHFAAQTHV 99 (684)
Q Consensus 74 d~~~~~~~~--~~~~~d~Vih~a~~~~~ 99 (684)
..+++...+ ...++|++|++|+....
T Consensus 71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 71 TALEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred hhHHHHHHHHhhhccceeEeeeechhhh
Confidence 344433332 11589999999998654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.91 E-value=0.03 Score=46.53 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=60.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhH---------H---------------HHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNS---------L---------------LDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~---------~---------------~~~~~~~~~d~Vih~ 426 (684)
++||.|+|+ |.+|+.++..|..++.. ++.-.|+..... . .+.+++ .|+|+-+
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~--advvvit 78 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAG--ADVVIVT 78 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTT--CSEEEEC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCC--CcEEEEe
Confidence 469999995 99999999877777753 444455432110 0 011233 4899999
Q ss_pred ceecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 427 AGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 427 a~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
|+....|...............|+.-...+++.+.+++.+
T Consensus 79 ag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~ 118 (150)
T d1t2da1 79 AGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN 118 (150)
T ss_dssp CSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred cccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9865222111112346677889999999999999998754
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.90 E-value=0.0092 Score=49.40 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=57.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC--eEeeeecc----------CCC----------hhHHHHHHHhcCCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI--AFEFGTGR----------LED----------KNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~--~v~~~~~d----------~~d----------~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
.||.|+|+ |.+|+.++-.|+.++. ++.++..+ +.+ .....+.+++. |+|+-+||.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 78 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDC--DVIVVTAGA 78 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTC--SEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCC--ceEEEeccc
Confidence 48999996 9999999999999986 33222211 000 00011224445 999999984
Q ss_pred cCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
. ........+..+.|+.-...+++.+.+++.+
T Consensus 79 ~-----~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ 110 (142)
T d1y6ja1 79 N-----RKPGETRLDLAKKNVMIAKEVTQNIMKYYNH 110 (142)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred c-----cCcCcchhHHhhHHHHHHHHHHHHhhccCCC
Confidence 4 2234567788899999999999999998654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.84 E-value=0.028 Score=42.53 Aligned_cols=73 Identities=18% Similarity=0.248 Sum_probs=50.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
...++||+|.|. |-.|..+++.|.++ |.+|++.+.+........+. ....+..+.. +... + .++|
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~~-----~~~~~~~~~~-~~~~----~--~~~d 66 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKLP-----EAVERHTGSL-NDEW----L--MAAD 66 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGSC-----TTSCEEESBC-CHHH----H--HHCS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHHh-----hccceeeccc-chhh----h--ccCC
Confidence 346789999995 88999999999999 89999999865433333222 2445554443 2222 2 4679
Q ss_pred EEEEcCcc
Q 035631 89 TIMHFAAQ 96 (684)
Q Consensus 89 ~Vih~a~~ 96 (684)
.||-.-|.
T Consensus 67 ~vi~SPGi 74 (93)
T d2jfga1 67 LIVASPGI 74 (93)
T ss_dssp EEEECTTS
T ss_pred EEEECCCC
Confidence 99976554
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.013 Score=49.31 Aligned_cols=76 Identities=11% Similarity=0.175 Sum_probs=55.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
..|+|.|. |-+|+.+++.|.+. +++|++++..+... ..........++.++.||..+++.+.++- -.+++.||=
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~--~~~v~vId~d~~~~--~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~-i~~a~~vi~ 77 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQR--GQNVTVISNLPEDD--IKQLEQRLGDNADVIPGDSNDSSVLKKAG-IDRCRAILA 77 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCCHHH--HHHHHHHHCTTCEEEESCTTSHHHHHHHT-TTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEeccchhH--HHHHHHhhcCCcEEEEccCcchHHHHHhc-cccCCEEEE
Confidence 46999995 99999999999999 88999998754210 00001112357899999999999987764 267999985
Q ss_pred cC
Q 035631 93 FA 94 (684)
Q Consensus 93 ~a 94 (684)
+.
T Consensus 78 ~~ 79 (153)
T d1id1a_ 78 LS 79 (153)
T ss_dssp CS
T ss_pred cc
Confidence 54
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.63 E-value=0.0065 Score=52.25 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=23.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGI 396 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~ 396 (684)
||||.|.||||++|..|++.|.++.+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~ 26 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPE 26 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCC
Confidence 57999999999999999999998754
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.61 E-value=0.021 Score=50.63 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=28.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|||.|.| .||+|..++..|+++||+|..+..|
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC
Confidence 7999997 9999999999999999999665443
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.60 E-value=0.023 Score=46.95 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=53.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHH------------------------HHHHhcCCCeEEEcc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLL------------------------DDMKRVRPTHVLNAA 427 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~------------------------~~~~~~~~d~Vih~a 427 (684)
+||.|+|+ |.+|..++-.|+.++. .+.+-.|+....... +.+++ -|+||-+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l-~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~--advvvita 77 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL-GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTAN--SDVIVVTS 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTT--CSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc-ceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcC--CCEEEEee
Confidence 59999995 9999999999988875 233334432111000 11233 48899999
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
|... .......+..+.|+.-...++..+.+++.+
T Consensus 78 g~~~-----~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~ 111 (142)
T d1uxja1 78 GAPR-----KPGMSREDLIKVNADITRACISQAAPLSPN 111 (142)
T ss_dssp SCC--------------CHHHHHHHHHHHHHHHGGGCTT
T ss_pred eccC-----CcCcchhHHHhHHHHHHHHHHHHHhccCCC
Confidence 8541 223455677788999899999999988654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.012 Score=49.72 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCCCCC--CCCceEEEecCCCHHHHHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHPSRA--SPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
..+||.|.|++|-+|+.+++.+.+.. +.++++. +|......-..+..... ..++.. .-|+ ...+ ..+
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~-~~~~------~~~~--~~~ 72 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QSSL------DAVK--DDF 72 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ESCS------TTTT--TSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecccchhccchhhhhhccccCCcee-eccH------HHHh--ccc
Confidence 34789999999999999999998874 6666554 34321111111111110 111222 2232 2333 689
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
|+||...- ..++...++.|.+.+ ..+|.-+|
T Consensus 73 DViIDFs~------------------p~~~~~~~~~a~~~~--~~~ViGTT 103 (162)
T d1diha1 73 DVFIDFTR------------------PEGTLNHLAFCRQHG--KGMVIGTT 103 (162)
T ss_dssp SEEEECSC------------------HHHHHHHHHHHHHTT--CEEEECCC
T ss_pred ceEEEecc------------------HHHHHHHHHHHHhcc--ceeEEecC
Confidence 99997653 234567888998877 56665444
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.52 E-value=0.0069 Score=51.12 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=25.0
Q ss_pred EEEEEcCCchhHHHHHHHHHhcC-CCcEEEEEc
Q 035631 14 KILITGAAGFIGSHVTNRLIKNY-PDYEIVALD 45 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~-~g~~V~~~~ 45 (684)
||.|.||||++|+.|++.|.++. +..++..+.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 79999999999999999887763 234555554
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.41 E-value=0.017 Score=45.30 Aligned_cols=51 Identities=16% Similarity=0.315 Sum_probs=44.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE----------------eeeeccCCChhHHHHHHHhcCCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF----------------EFGTGRLEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v----------------~~~~~d~~d~~~~~~~~~~~~~d~V 423 (684)
.||.|.| +|.+|+-|+....+-|+++ .++.+|..|.+.+.++...+.+|+|
T Consensus 12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~Dvi 78 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYI 78 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence 4899999 8999999999999999987 5667788899999888877777887
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.0028 Score=55.11 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH---HHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL---MNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~ 87 (684)
.+.+|||+||+|-+|...++.+... |.+|+++++++ .+.+.+... +... ..|..+.+. +.+.....++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~--~~~~~~~~~----Ga~~-vi~~~~~~~~~~i~~~t~~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTE--EGQKIVLQN----GAHE-VFNHREVNYIDKIKKYVGEKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSH--HHHHHHHHT----TCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred CCCEEEEEecccccccccccccccc--Ccccccccccc--ccccccccc----Cccc-ccccccccHHHHhhhhhccCCc
Confidence 4578999999999999999998888 89999998864 222222211 1211 235555443 3444455679
Q ss_pred CEEEEcCc
Q 035631 88 DTIMHFAA 95 (684)
Q Consensus 88 d~Vih~a~ 95 (684)
|+||.+.|
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99999876
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.0057 Score=52.48 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=28.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|||+|+|+ |.+|+.++..|.+.||+|+++..+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~ 32 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRV 32 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcC
Confidence 79999996 999999999999999999665544
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.37 E-value=0.0048 Score=52.13 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=22.5
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCC
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGI 396 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~ 396 (684)
||.|.|||||+|..|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999998875
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.37 E-value=0.035 Score=45.05 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=50.1
Q ss_pred EEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc-CCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 14 ~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
||.|.|++|-+|+.+++.+.+.. ++++.+.- +.. +.. .+...++|+||.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~~~d~~~-------------------------~~~----~~~~~~~DvvID 50 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDAGD-------------------------PLS----LLTDGNTEVVID 50 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHST-TSEEEEEECTTC-------------------------CTH----HHHTTTCSEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCC-------------------------chh----hhccccCCEEEE
Confidence 79999999999999999887763 67766542 210 011 112268999998
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
+..+.. +...++.|.+.+ ..+|.-+|
T Consensus 51 FS~p~~------------------~~~~~~~~~~~~--~~~ViGTT 76 (135)
T d1yl7a1 51 FTHPDV------------------VMGNLEFLIDNG--IHAVVGTT 76 (135)
T ss_dssp CCCTTT------------------HHHHHHHHHHTT--CEEEECCC
T ss_pred cccHHH------------------HHHHHHHHHhcC--CCEEEecc
Confidence 765422 457888888877 45554333
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.33 E-value=0.0089 Score=51.34 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=29.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
|+||.|.||||++|+.|++.|.++. ..++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP-~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHP-EAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT-TEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCC-CceEEEeecc
Confidence 5799999999999999999888763 6777777543
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=95.25 E-value=0.0072 Score=52.11 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.+.+|||+||+|-+|+..++.+... |.+|++.++++. +...+... +...+ .|..+.. .+.....++|+|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~--~~~~~~~l----Ga~~~-i~~~~~~--~~~~~~~g~D~v 95 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPE--KLALPLAL----GAEEA-ATYAEVP--ERAKAWGGLDLV 95 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGG--GSHHHHHT----TCSEE-EEGGGHH--HHHHHTTSEEEE
T ss_pred CCCEEEEEeccccchhhhhhhhccc--cccccccccccc--cccccccc----cccee-eehhhhh--hhhhcccccccc
Confidence 3578999999999999999988888 889999998642 22222211 22221 2443332 233344789999
Q ss_pred EEcCc
Q 035631 91 MHFAA 95 (684)
Q Consensus 91 ih~a~ 95 (684)
|.++|
T Consensus 96 ~d~~G 100 (171)
T d1iz0a2 96 LEVRG 100 (171)
T ss_dssp EECSC
T ss_pred ccccc
Confidence 99876
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.19 E-value=0.05 Score=44.09 Aligned_cols=76 Identities=9% Similarity=0.066 Sum_probs=52.9
Q ss_pred EEEEEcCCcchhHHHHHHHHhc-CCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceecCCCCccccccchhhHhhhchh
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDK-GIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVM 451 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~-g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~nv~ 451 (684)
||.|.|++|=.|+.+++.+.+. ++++.. ..|..+.. ..+...++|+||.+..+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~-~~d~~~~~---~~~~~~~~DvvIDFS~p~--------------------- 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSA-ELDAGDPL---SLLTDGNTEVVIDFTHPD--------------------- 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEE-EECTTCCT---HHHHTTTCSEEEECCCTT---------------------
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEecCCch---hhhccccCCEEEEcccHH---------------------
Confidence 7999999999999999987664 455532 23433222 233444679999997632
Q ss_pred hhHHHHHHHHHcCCeEEEEecc
Q 035631 452 GTLTLADVCKEKNVLLMNFATG 473 (684)
Q Consensus 452 ~~~~ll~~~~~~~~~~i~~SS~ 473 (684)
.+...++.|.++++++|.=+|.
T Consensus 56 ~~~~~~~~~~~~~~~~ViGTTG 77 (135)
T d1yl7a1 56 VVMGNLEFLIDNGIHAVVGTTG 77 (135)
T ss_dssp THHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCEEEeccc
Confidence 3667899999999988765554
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.19 E-value=0.0035 Score=54.92 Aligned_cols=75 Identities=20% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH---HHHhhccCCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL---MNYLLVSEGID 88 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~d 88 (684)
+.+|||+||+|-+|..+++.+... |.+|++.++++ ++.+.+... +... ..|..+.+. +.+.....++|
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~--~~~~~l~~~----Ga~~-vi~~~~~~~~~~v~~~t~~~g~d 96 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSD--AKREMLSRL----GVEY-VGDSRSVDFADEILELTDGYGVD 96 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSH--HHHHHHHTT----CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCEEEEECCCCCcccccchhhccc--cccceeeeccc--ccccccccc----cccc-cccCCccCHHHHHHHHhCCCCEE
Confidence 478999999999999999999888 89999998864 223333322 2222 234444433 33444446899
Q ss_pred EEEEcCc
Q 035631 89 TIMHFAA 95 (684)
Q Consensus 89 ~Vih~a~ 95 (684)
+||.+.|
T Consensus 97 ~v~d~~g 103 (183)
T d1pqwa_ 97 VVLNSLA 103 (183)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 9999887
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=95.11 E-value=0.016 Score=47.98 Aligned_cols=55 Identities=18% Similarity=0.311 Sum_probs=43.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
+++|.|+|+||-||...++-+.+....++|++++-.. +.+.+.+...+.+|.+|+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-------------------------N~~~L~~q~~ef~Pk~v~ 56 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-------------------------NVKDLADAAKRTNAKRAV 56 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-------------------------CHHHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-------------------------CHHHHHHHHHhhccccce
Confidence 5899999999999999999998765568999886532 345566666667888876
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.05 E-value=0.016 Score=47.54 Aligned_cols=53 Identities=25% Similarity=0.351 Sum_probs=41.1
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE------------------eeeeccCCChhHHHHH-HHhcCCCeEEEcce
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF------------------EFGTGRLEDKNSLLDD-MKRVRPTHVLNAAG 428 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v------------------~~~~~d~~d~~~~~~~-~~~~~~d~Vih~a~ 428 (684)
+++|.| .|-+|+++++.|.++|++| ..+.+|.++.+.+.++ +.+. |.||=+..
T Consensus 2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a--~~vi~~~~ 73 (134)
T d2hmva1 2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNF--EYVIVAIG 73 (134)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGC--SEEEECCC
T ss_pred EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccc--cEEEEEcC
Confidence 688887 5999999999999999987 4566788888888766 4554 76655544
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.98 E-value=0.04 Score=48.61 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=30.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|.| .|++|..++..|.++ |++|+++|.+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~--g~~V~g~D~n~ 33 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVSS 33 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhC--CCcEEEEeCCH
Confidence 6899997 899999999999999 89999999864
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.96 E-value=0.13 Score=41.19 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=58.7
Q ss_pred CCCEEEEEcCC---chhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCC
Q 035631 11 KPKKILITGAA---GFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGat---G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (684)
..++|.|.||| |..|..+.+.|.+.+ ..+|+.+..... .+ .++.. .-++.|.. ..+
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~-----~i------~G~~~-y~sl~dlp--------~~v 65 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEE-----EV------QGVKA-YKSVKDIP--------DEI 65 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCS-----EE------TTEEC-BSSTTSCS--------SCC
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCcc-----cc------CCeEe-ecchhhcC--------CCC
Confidence 55899999999 999999999987653 579999976421 01 11111 22343322 578
Q ss_pred CEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 88 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
|.++-+.. ...+..+++.|.+.| ++.++.+|+
T Consensus 66 Dlvvi~vp------------------~~~~~~~~~~~~~~g-~~~~vi~s~ 97 (129)
T d2csua1 66 DLAIIVVP------------------KRFVKDTLIQCGEKG-VKGVVIITA 97 (129)
T ss_dssp SEEEECSC------------------HHHHHHHHHHHHHHT-CCEEEECCC
T ss_pred ceEEEecC------------------hHHhHHHHHHHHHcC-CCEEEEecc
Confidence 98885442 223456778888878 888888876
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.90 E-value=0.009 Score=43.23 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
...+|||+||+|-+|...++.+... |.+|++.++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~ 66 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE 66 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCH
Confidence 4578999999999999999988877 89999998864
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.90 E-value=0.021 Score=47.23 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=42.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
|++|.|+|+||-||+..++-+.+....++|.+++-.. +.+.+.+...+.+|.+|+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-------------------------N~~~L~~q~~~f~pk~v~ 55 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-------------------------NVTRMVEQCLEFSPRYAV 55 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-------------------------CHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-------------------------cHHHHHHHHHHHhhcccc
Confidence 5789999999999999999998876578999887532 345555555556888877
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=94.89 E-value=0.05 Score=44.96 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=55.2
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChh------HHH-----------------HHHHhcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKN------SLL-----------------DDMKRVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~------~~~-----------------~~~~~~~~d~Vih~a~ 428 (684)
.||.|+| .|.+|..++-.|+.+|.--+++-.|+.... ++. +.+++. |+||-+||
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~a--diVVitaG 78 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADA--DVVISTLG 78 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTC--SEEEECCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccc--cEEEEecc
Confidence 4899999 599999999999998852222233432110 011 123344 89999988
Q ss_pred ecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCe
Q 035631 429 ITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
....+. ........+..+.|+.-...+++.+.+++.+
T Consensus 79 ~~~~~~-~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~ 115 (146)
T d1hyha1 79 NIKLQQ-DNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115 (146)
T ss_dssp CGGGTC--------CTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccc-ccCCccHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 541111 1112234456778898899999999988654
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=94.85 E-value=0.015 Score=49.59 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=27.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
|||.|.| .|.+|+.+++.|.++||+|..+.
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d 30 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVS 30 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEE
Confidence 7999998 69999999999999999996653
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.84 E-value=0.02 Score=49.65 Aligned_cols=77 Identities=22% Similarity=0.266 Sum_probs=46.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCC--CceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP--NFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
|||.|.| +|-.|.+++..|.++ |++|....|.........+......+ .......++.-.+++.+++ .++|+|
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ad~I 75 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--ENAEVV 75 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--TTCSEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH--hccchh
Confidence 7899999 699999999999999 89999998843221111111110000 1111111222244566667 789999
Q ss_pred EEcC
Q 035631 91 MHFA 94 (684)
Q Consensus 91 ih~a 94 (684)
|-+.
T Consensus 76 i~av 79 (180)
T d1txga2 76 LLGV 79 (180)
T ss_dssp EECS
T ss_pred hccc
Confidence 8654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.71 E-value=0.015 Score=50.60 Aligned_cols=35 Identities=23% Similarity=0.580 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r 46 (684)
.+.||.|.||||+.|+.|++.|.++ +..++..+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S 38 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTA 38 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEec
Confidence 4578999999999999999999987 3677776653
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=94.70 E-value=0.0095 Score=50.49 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=53.6
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhc-CCeEeee---------ecc-----------CCChhHHHHHHHhcCCCeEEEcc
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDK-GIAFEFG---------TGR-----------LEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~-g~~v~~~---------~~d-----------~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
.+.|||.|.|++|=.|+.+++.+.+. +.++... .-| +.-.+.++.+++.. |+||.+.
T Consensus 2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~--DViIDFs 79 (162)
T d1diha1 2 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF--DVFIDFT 79 (162)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC--SEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc--ceEEEec
Confidence 35689999999999999999988876 4333110 001 11111223334444 8998885
Q ss_pred eecCCCCccccccchhhHhhhchhhhHHHHHHHHHcCCeEEEEecc
Q 035631 428 GITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATG 473 (684)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~ 473 (684)
-+ .++...++.|.++++++|.=+|.
T Consensus 80 ~p---------------------~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 80 RP---------------------EGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp CH---------------------HHHHHHHHHHHHTTCEEEECCCC
T ss_pred cH---------------------HHHHHHHHHHHhccceeEEecCC
Confidence 42 23566899999999888877665
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.68 E-value=0.034 Score=46.52 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=38.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCC-----------hhHHHHHHHhcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLED-----------KNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d-----------~~~~~~~~~~~~~d~Vih~a~ 428 (684)
|||.|+| .|-+|+.+++.|+++|++|.....+-.. .+...++++.. |.||-|..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSC--PVVISAVT 65 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTS--SEEEECSC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhc--CeEEEEec
Confidence 7999998 7999999999999999998654332211 11233455565 88877654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=94.61 E-value=0.16 Score=39.70 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
..+++|||.| .|-+|..-++.|++. |.+|++++......... + ....+++++.....+.+ + .+++.
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~d-----l--~~~~l 75 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEA--GARLTVNALTFIPQFTV-W---ANEGMLTLVEGPFDETL-----L--DSCWL 75 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHT--TBEEEEEESSCCHHHHH-H---HTTTSCEEEESSCCGGG-----G--TTCSE
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHC--CCeEEEEeccCChHHHH-H---HhcCCceeeccCCCHHH-----h--CCCcE
Confidence 4568999999 699999999999999 88998887654322111 1 12246777776654432 3 57888
Q ss_pred EEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 035631 90 IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVST 138 (684)
Q Consensus 90 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS 138 (684)
|+-+.+. . .-...+.+.|++.+ .+|++..
T Consensus 76 v~~at~d---------~--------~~n~~i~~~a~~~~---ilVNv~D 104 (113)
T d1pjqa1 76 AIAATDD---------D--------TVNQRVSDAAESRR---IFCNVVD 104 (113)
T ss_dssp EEECCSC---------H--------HHHHHHHHHHHHTT---CEEEETT
T ss_pred EeecCCC---------H--------HHHHHHHHHHHHcC---CEEEeCC
Confidence 8854331 1 11246778888765 4666543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.59 E-value=0.01 Score=51.94 Aligned_cols=36 Identities=17% Similarity=0.032 Sum_probs=29.9
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
++.|+||.|.| +|--|++++..|.++||+|.+...|
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~ 39 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN 39 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec
Confidence 34455899999 8999999999999999999766543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=94.55 E-value=0.033 Score=47.60 Aligned_cols=78 Identities=13% Similarity=0.031 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecC--CCHHHHHHhhc---cC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI--TCADLMNYLLV---SE 85 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl--~d~~~~~~~~~---~~ 85 (684)
.+.+|+|+| +|-+|...++.+... |.+|+++++++. +++..... ... ..+..|- .+.....+.+. ..
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~~~~~--r~~~a~~~--ga~-~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAY--GAFVVCTARSPR--RLEVAKNC--GAD-VTLVVDPAKEEESSIIERIRSAIGD 97 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHT--TCS-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEEc-ccccchhhHhhHhhh--cccccccchHHH--HHHHHHHc--CCc-EEEeccccccccchhhhhhhccccc
Confidence 346899997 799999999888877 789999998742 22111111 011 2222222 22333333322 35
Q ss_pred CCCEEEEcCcc
Q 035631 86 GIDTIMHFAAQ 96 (684)
Q Consensus 86 ~~d~Vih~a~~ 96 (684)
++|+||.++|.
T Consensus 98 g~D~vid~~g~ 108 (170)
T d1e3ja2 98 LPNVTIDCSGN 108 (170)
T ss_dssp CCSEEEECSCC
T ss_pred CCceeeecCCC
Confidence 79999999874
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=94.44 E-value=0.04 Score=49.31 Aligned_cols=88 Identities=8% Similarity=0.141 Sum_probs=56.1
Q ss_pred ceEEEEEcC----------------CcchhHHHHHHHHhcCCeEeeeeccCC-------------ChhHHHHH----HHh
Q 035631 371 RLKFLIYGK----------------TGWIGGLLGKYCKDKGIAFEFGTGRLE-------------DKNSLLDD----MKR 417 (684)
Q Consensus 371 ~m~ilItG~----------------~G~iG~~l~~~L~~~g~~v~~~~~d~~-------------d~~~~~~~----~~~ 417 (684)
.|+||||+| ||-.|.+|++++..+|++|+++.+... ..+++... +..
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~~~~ 85 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQ 85 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGGG
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhhhcc
Confidence 357777775 899999999999999999988777532 33333333 344
Q ss_pred cCCCeEEEcceecCCCCccccccch---------hhHhhhchhhhHHHHHHHHHc
Q 035631 418 VRPTHVLNAAGITGRPNVDWCESHR---------VETIRTNVMGTLTLADVCKEK 463 (684)
Q Consensus 418 ~~~d~Vih~a~~~~~~~~~~~~~~~---------~~~~~~nv~~~~~ll~~~~~~ 463 (684)
. |++|++|+.. .+....... ...+..+..-+..+|..+.+.
T Consensus 86 ~--D~~i~aAAvs---Df~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~ 135 (223)
T d1u7za_ 86 Q--NIFIGCAAVA---DYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAAL 135 (223)
T ss_dssp C--SEEEECCBCC---SEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHC
T ss_pred c--eeEeeeechh---hhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhh
Confidence 5 9999999965 332111110 011234455566778777654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=94.43 E-value=0.035 Score=48.10 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=30.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|.|| |-+|..++..|.++ |++|.+++|++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~r~~ 34 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDA 34 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEECc-cHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 79999995 99999999999999 89999999964
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=94.42 E-value=0.0044 Score=54.01 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHH---HHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADL---MNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~ 87 (684)
.+.+|||+||+|-+|..+++.+... |.+|++.++++. +...+... +... ..|..+.+. +.++....++
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~--k~~~~~~l----Ga~~-vi~~~~~d~~~~v~~~t~g~g~ 98 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQ--KAQSALKA----GAWQ-VINYREEDLVERLKEITGGKKV 98 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHH--HHHHHHHH----TCSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEccccccchHHHHHHHHh--CCeEeecccchH--HHHHHHhc----CCeE-EEECCCCCHHHHHHHHhCCCCe
Confidence 3579999999999999999999888 899999998752 22222111 2222 235555433 3344445679
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|+|+.+.+.
T Consensus 99 d~v~d~~g~ 107 (179)
T d1qora2 99 RVVYDSVGR 107 (179)
T ss_dssp EEEEECSCG
T ss_pred EEEEeCccH
Confidence 999998874
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.40 E-value=0.11 Score=43.79 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=28.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|+||.+.| .|..|..+++.|+++||+|..+..+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~ 33 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV 33 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECc
Confidence 35899998 8999999999999999998665443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=94.39 E-value=0.022 Score=48.59 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=30.4
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|.| .|.+|+.+++.|.++ |++|++.+|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~--g~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRR--GHYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCc
Confidence 6899998 699999999999999 89999999974
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.35 E-value=0.014 Score=50.31 Aligned_cols=76 Identities=18% Similarity=0.047 Sum_probs=46.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH-HHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA-DLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d~V 90 (684)
..+|||+||+|-+|+..++.+... |.+|++..+++.. ...+... +...+ .|..+. +.........++|+|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k--~~~~~~l----Ga~~v-i~~~~~~~~~~~~~~~~gvD~v 102 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAE--HDYLRVL----GAKEV-LAREDVMAERIRPLDKQRWAAA 102 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTC--HHHHHHT----TCSEE-EECC---------CCSCCEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHH--HHHHHhc----cccee-eecchhHHHHHHHhhccCcCEE
Confidence 467999999999999999998888 8999999986422 2111111 11111 122221 222233445689999
Q ss_pred EEcCcc
Q 035631 91 MHFAAQ 96 (684)
Q Consensus 91 ih~a~~ 96 (684)
|.+.|-
T Consensus 103 id~vgg 108 (176)
T d1xa0a2 103 VDPVGG 108 (176)
T ss_dssp EECSTT
T ss_pred EEcCCc
Confidence 999874
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.29 E-value=0.025 Score=49.34 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.|+||.|.| +|-.|++++..|.++ |++|...+|++
T Consensus 6 ~m~KI~ViG-aG~wGtAlA~~La~~--g~~V~l~~r~~ 40 (189)
T d1n1ea2 6 YLNKAVVFG-SGAFGTALAMVLSKK--CREVCVWHMNE 40 (189)
T ss_dssp CEEEEEEEC-CSHHHHHHHHHHHTT--EEEEEEECSCH
T ss_pred eeceEEEEC-CCHHHHHHHHHHHHc--CCeEEEEEecH
Confidence 446799999 799999999999999 89999999863
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.22 E-value=0.029 Score=48.10 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=31.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|++|+|.| .|.+|..+++.|.+.++..+|++.+++.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence 46899998 7999999999999996667999999974
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.18 E-value=0.013 Score=50.94 Aligned_cols=27 Identities=11% Similarity=0.368 Sum_probs=24.5
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI 396 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~ 396 (684)
.++||.|.|||||+|..|++.|.++.+
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~ 30 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQ 30 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSS
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCC
Confidence 467999999999999999999998864
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.05 E-value=0.13 Score=43.78 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
|.++||.|.| +|.+|+.+++.|.+. ++++++++...
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~ 36 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSR 36 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEES
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEec
Confidence 3457899999 799999999999875 37888877543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.89 E-value=0.0068 Score=51.38 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
..+++|||+|+ |-+|+.+++.|.+. |. ++++..|+.. +...+... -+.+. ...+++.+.+ .++|
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~--g~~~i~v~nRt~~--ka~~l~~~---~~~~~-----~~~~~~~~~l--~~~D 86 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLVANRTYE--RAVELARD---LGGEA-----VRFDELVDHL--ARSD 86 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHH--CCSEEEEECSSHH--HHHHHHHH---HTCEE-----CCGGGHHHHH--HTCS
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhc--CCcEEEEEcCcHH--HHHHHHHh---hhccc-----ccchhHHHHh--ccCC
Confidence 45689999996 99999999999999 65 7888888631 22111111 01122 2234555666 6899
Q ss_pred EEEEcCccC
Q 035631 89 TIMHFAAQT 97 (684)
Q Consensus 89 ~Vih~a~~~ 97 (684)
+||.+.+..
T Consensus 87 ivi~atss~ 95 (159)
T d1gpja2 87 VVVSATAAP 95 (159)
T ss_dssp EEEECCSSS
T ss_pred EEEEecCCC
Confidence 999988754
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=93.88 E-value=0.074 Score=45.31 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=32.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDM 415 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~ 415 (684)
++|+|.| .|.+|..+++.|.+.|+.++++-.|.. .+.++.+.
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-~~~~~~a~ 43 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-PESISKAV 43 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-HHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-hHHHHHHH
Confidence 3799998 799999999999999987766666753 44444443
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.88 E-value=0.085 Score=43.48 Aligned_cols=54 Identities=20% Similarity=0.161 Sum_probs=44.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhc--CCeEeeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDK--GIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~--g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
++|.|.|+||-||....+.+.+. .++|..+.+. .+.+.+.+....++|.+|+-.
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-~N~~~L~~q~~ef~Pk~v~i~ 58 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-RNVKDLADAAKRTNAKRAVIA 58 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-SCHHHHHHHHHHTTCSEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-CCHHHHHHHHHhhccccceec
Confidence 58999999999999999999775 4566666554 588889999999999988544
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.67 E-value=0.041 Score=46.56 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=39.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCCh-----------hHHHHHHHhcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK-----------NSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~-----------~~~~~~~~~~~~d~Vih~a~ 428 (684)
|||.|.| .|.+|..+++.|+++||+|..+..+-... ++..++++.. |+||-|..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~--d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQC--DVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHC--SEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCC--CeEEEEcC
Confidence 7999999 79999999999999999997654432111 1233456666 88877764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=93.63 E-value=0.24 Score=37.25 Aligned_cols=43 Identities=9% Similarity=-0.056 Sum_probs=30.6
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHH
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDM 415 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~ 415 (684)
.++|.+.|.+|--=+.|++.|+++|++|... |..+....+.+.
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~G~~VsGS--D~~~~~~~~~L~ 50 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNEGYQISGS--DIADGVVTQRLA 50 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEE--ESCCSHHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHhCCCEEEEE--eCCCChhhhHHH
Confidence 4589998866554478999999999999765 444444444443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.59 E-value=0.29 Score=36.08 Aligned_cols=40 Identities=13% Similarity=-0.011 Sum_probs=30.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLD 413 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~ 413 (684)
|||-++|.+|-==+.|++.|+++|+.|... |+.+.+..+.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGS--D~~~~~~t~~ 41 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGS--NIEETERTAY 41 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE--CSSCCHHHHH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEE--eCCCChhHHH
Confidence 699999876655558999999999999775 5555555554
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=93.55 E-value=0.039 Score=39.69 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=33.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHH
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLL 412 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~ 412 (684)
++|||+||+|-+|...++.+...|.+|....+.-.+.+.+.
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 58999999999999999999999999977766554444443
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.31 E-value=0.089 Score=43.34 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=43.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC--CeEeeeeccCCChhHHHHHHHhcCCCeEEEc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG--IAFEFGTGRLEDKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g--~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~ 426 (684)
++|.|.|+||-||....+-+.+.. ++|..+.+ -.+.+.+.+....++|.+|+-.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-~~N~~~L~~q~~~f~pk~v~i~ 57 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEFSPRYAVMD 57 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHHCCSEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-cCcHHHHHHHHHHHhhcccccc
Confidence 479999999999999999988774 56666655 4578888899999999987543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.31 E-value=0.051 Score=47.40 Aligned_cols=36 Identities=17% Similarity=0.381 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
||-+||.|.|| |.+|+.++..++.+ |++|++.++++
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTE 37 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhC--CCcEEEEECCh
Confidence 45689999996 99999999999999 99999999974
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=92.86 E-value=0.11 Score=43.58 Aligned_cols=56 Identities=23% Similarity=0.336 Sum_probs=43.3
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCC-eEeeeecc--------------CCChhHHHHHHHhcCCCeEEEcce
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGI-AFEFGTGR--------------LEDKNSLLDDMKRVRPTHVLNAAG 428 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~-~v~~~~~d--------------~~d~~~~~~~~~~~~~d~Vih~a~ 428 (684)
...+|||+|+ |-+|..++++|.++|. ++.+.... ..+.+++.+.+..+ |+||.+.+
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~--Divi~ats 93 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS--DVVVSATA 93 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC--SEEEECCS
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccC--CEEEEecC
Confidence 3458999996 9999999999999997 46444433 23566777777777 99999877
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.85 E-value=0.049 Score=46.98 Aligned_cols=30 Identities=23% Similarity=0.260 Sum_probs=27.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
|||.|.| +|-.|..|+..|.++|++|.+..
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~ 30 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWG 30 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence 7999999 79999999999999999996653
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=92.85 E-value=0.085 Score=45.52 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccc-ccccCC-CCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS-SLKNLH-PSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
.+++|+|+|+ |..|++++..|.+.+ .-++++..|+.... +...+. .....-.......++.+.+.+.+.+ ..+|
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g-~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d 92 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL--ASAD 92 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH--HTCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcC-CceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh--cccc
Confidence 5689999995 888999999999984 34888888864211 111110 0001112345567888888887777 7999
Q ss_pred EEEEcCccC
Q 035631 89 TIMHFAAQT 97 (684)
Q Consensus 89 ~Vih~a~~~ 97 (684)
+|||+....
T Consensus 93 iiIN~Tp~G 101 (182)
T d1vi2a1 93 ILTNGTKVG 101 (182)
T ss_dssp EEEECSSTT
T ss_pred eeccccCCc
Confidence 999997653
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.77 E-value=0.12 Score=44.36 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
..+++|.|.| .|-||+.+++.|..- |.+|++.+|...... ... .+.+++++ ..+|+
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~--g~~v~~~d~~~~~~~------------~~~-------~~~l~ell--~~sDi 95 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAAL--GAQVRGFSRTPKEGP------------WRF-------TNSLEEAL--REARA 95 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHT--TCEEEEECSSCCCSS------------SCC-------BSCSHHHH--TTCSE
T ss_pred ccCceEEEec-cccccccceeeeecc--ccccccccccccccc------------eee-------eechhhhh--hccch
Confidence 4678999999 799999999999988 899999998642110 000 11245667 78999
Q ss_pred EEEcCcc
Q 035631 90 IMHFAAQ 96 (684)
Q Consensus 90 Vih~a~~ 96 (684)
|+-+...
T Consensus 96 v~~~~pl 102 (181)
T d1qp8a1 96 AVCALPL 102 (181)
T ss_dssp EEECCCC
T ss_pred hhccccc
Confidence 8876543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.54 E-value=0.03 Score=48.81 Aligned_cols=75 Identities=15% Similarity=0.104 Sum_probs=44.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCCH--HHHHHhhccCCCCE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA--DLMNYLLVSEGIDT 89 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~~~d~ 89 (684)
.+|||+||+|-+|+..++..... |. .|++.+.++ ++...+... -+.. ...|..+. .+........++|+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~--e~~~~l~~~---~gad-~vi~~~~~~~~~~~~~~~~~GvDv 103 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQ--EKCLFLTSE---LGFD-AAVNYKTGNVAEQLREACPGGVDV 103 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSH--HHHHHHHHH---SCCS-EEEETTSSCHHHHHHHHCTTCEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHc--CCcceecccchH--HHHhhhhhc---ccce-EEeeccchhHHHHHHHHhccCceE
Confidence 67999999999999999988777 55 555555532 111111100 0111 12344433 22222233468999
Q ss_pred EEEcCc
Q 035631 90 IMHFAA 95 (684)
Q Consensus 90 Vih~a~ 95 (684)
||.+.|
T Consensus 104 v~D~vG 109 (187)
T d1vj1a2 104 YFDNVG 109 (187)
T ss_dssp EEESSC
T ss_pred EEecCC
Confidence 999887
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.53 E-value=0.085 Score=43.94 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=27.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|||.|.| +|-+|+.|++.|++.|+++.....+
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~ 32 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSS 32 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh
Confidence 7999998 9999999999999999998655433
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.52 E-value=0.064 Score=45.30 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|+||.+.| .|.+|+.+++.|+++ ||+|.+.+|+.
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~--g~~v~~~d~~~ 34 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQ 34 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHC--CCeEEEEECch
Confidence 46899998 899999999999999 89999999974
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=92.31 E-value=0.19 Score=43.09 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=28.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
+||.|+| +|-+|..++..|.++||+|..+..+
T Consensus 2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~ 33 (184)
T d1bg6a2 2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID 33 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECC
Confidence 5999999 5999999999999999999766543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.25 E-value=0.058 Score=46.08 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=48.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCCHHHHHHhh---ccCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITCADLMNYLL---VSEG 86 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d~~~~~~~~---~~~~ 86 (684)
+.+|+|+|+ |-+|...+..+... |. +|++.++++. ++...... +. .++..+-.+.....+.+ ...+
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~--G~~~Vi~~d~~~~--rl~~a~~~----Ga~~~~~~~~~~~~~~~~~~~~~~g~g 97 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDLSAT--RLSKAKEI----GADLVLQISKESPQEIARKVEGQLGCK 97 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESCHH--HHHHHHHT----TCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CCEEEEECC-CccHHHHHHHHHHc--CCceEEeccCCHH--HHHHHHHh----CCcccccccccccccccccccccCCCC
Confidence 468999986 99999999988888 55 8999998642 22111111 22 23333334444333332 2357
Q ss_pred CCEEEEcCcc
Q 035631 87 IDTIMHFAAQ 96 (684)
Q Consensus 87 ~d~Vih~a~~ 96 (684)
+|+||.+.|.
T Consensus 98 ~Dvvid~~G~ 107 (171)
T d1pl8a2 98 PEVTIECTGA 107 (171)
T ss_dssp CSEEEECSCC
T ss_pred ceEEEeccCC
Confidence 9999999874
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=92.20 E-value=0.1 Score=37.38 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=30.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+|+|.|.| +|.+|+-++..-.+- |++|++++..+
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~L--G~~v~vldp~~ 34 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPL--GIAVWPVGLDA 34 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGG--TEEEEEECTTS
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEcCCC
Confidence 47899999 799999999999999 99999999764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=92.16 E-value=0.15 Score=42.45 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=41.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEE-cCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVAL-DKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~-~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+.||.|.| +|.+|+.+...+++..+..+++++ +|+.......... ..++.+.. ...+.+.+..+..++|+|
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~----~~~i~~~~---~~~d~l~~~~~~~~iDiV 75 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ----RMGVTTTY---AGVEGLIKLPEFADIDFV 75 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH----HTTCCEES---SHHHHHHHSGGGGGEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh----hcCCcccc---cceeeeeecccccccCEE
Confidence 46899999 999999765555555456788887 4543211100000 11233322 123444444434679999
Q ss_pred EEcC
Q 035631 91 MHFA 94 (684)
Q Consensus 91 ih~a 94 (684)
|.+.
T Consensus 76 f~AT 79 (157)
T d1nvmb1 76 FDAT 79 (157)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9653
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=92.11 E-value=0.35 Score=37.57 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=54.3
Q ss_pred CCCEEEEEcCC----------chhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHH
Q 035631 11 KPKKILITGAA----------GFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 11 ~~~~VlItGat----------G~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
..+||||.|+. -+-+.+.++.|.+. |++++.+.-++..-.. ..+-..-+...-...+.+.+
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVst-------d~d~aD~lYfeplt~e~v~~ 73 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVST-------DYDTSDRLYFEPVTLEDVLE 73 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTT-------STTSSSEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhhc-------ChhhcCceEEccCCHHHHHH
Confidence 45799999973 37899999999999 9999999887531111 11223334555556788888
Q ss_pred hhccCCCCEEEEcCc
Q 035631 81 LLVSEGIDTIMHFAA 95 (684)
Q Consensus 81 ~~~~~~~d~Vih~a~ 95 (684)
.++.+++|.|+-..|
T Consensus 74 Ii~~E~p~~ii~~~G 88 (121)
T d1a9xa4 74 IVRIEKPKGVIVQYG 88 (121)
T ss_dssp HHHHHCCSEEECSSS
T ss_pred HHHHhCCCEEEeehh
Confidence 888899999885443
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=92.03 E-value=0.2 Score=39.49 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCCEEEEEcC----------CchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHH
Q 035631 11 KPKKILITGA----------AGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNY 80 (684)
Q Consensus 11 ~~~~VlItGa----------tG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 80 (684)
..+||||.|+ --+-+.+.++.|.+. |++++.+.-++..-... .+-..-+...-...+.+.+
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd-------~d~aD~lYfePlt~e~v~~ 76 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTD-------PEMADATYIEPIHWEVVRK 76 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGC-------GGGSSEEECSCCCHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcC-------hhhcceeeeecCCHHHHHH
Confidence 3489999998 347899999999999 99999998875321110 1112334556667888999
Q ss_pred hhccCCCCEEEEcCc
Q 035631 81 LLVSEGIDTIMHFAA 95 (684)
Q Consensus 81 ~~~~~~~d~Vih~a~ 95 (684)
.++.+++|.|+-..|
T Consensus 77 Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 77 IIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHCCSEEECSSS
T ss_pred HHHHhCcCCeEEEee
Confidence 998899999985444
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=92.03 E-value=0.077 Score=45.58 Aligned_cols=33 Identities=9% Similarity=0.411 Sum_probs=30.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||-|.| .|.+|..+++.|+++ |++|++.+|+.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~--G~~V~~~dr~~ 34 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEK--GFKVAVFNRTY 34 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 6799998 999999999999999 89999999964
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.95 E-value=0.066 Score=45.54 Aligned_cols=74 Identities=19% Similarity=0.119 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCC-HHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITC-ADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d-~~~~~~~~~~~~~d 88 (684)
.+.+|+|+|+ |-+|...++.+... |.+|+++++++. +....... +. +++ |..+ .+...... ..+|
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~--G~~vi~~~~~~~--k~~~a~~l----Ga~~~i--~~~~~~~~~~~~~--~~~d 93 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSR--KREDAMKM----GADHYI--ATLEEGDWGEKYF--DTFD 93 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSST--THHHHHHH----TCSEEE--EGGGTSCHHHHSC--SCEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhc--cccccccccchh--HHHHhhcc----CCcEEe--eccchHHHHHhhh--cccc
Confidence 3578999996 99999999888777 889999998752 22211111 12 222 2222 22232322 5799
Q ss_pred EEEEcCccC
Q 035631 89 TIMHFAAQT 97 (684)
Q Consensus 89 ~Vih~a~~~ 97 (684)
+|+.+.+..
T Consensus 94 ~vi~~~~~~ 102 (168)
T d1piwa2 94 LIVVCASSL 102 (168)
T ss_dssp EEEECCSCS
T ss_pred eEEEEecCC
Confidence 999987754
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=91.77 E-value=0.021 Score=49.60 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCC--HHH----HHHhhc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC--ADL----MNYLLV 83 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~----~~~~~~ 83 (684)
.+.+|||+|+ |-+|...++.+... |. +|+++++++. +.+..... +... ..|..+ ... +.+...
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~--Ga~~Vi~~~~~~~--~~~~a~~l----Ga~~-vi~~~~~~~~~~~~~i~~~~~ 97 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSL--GAENVIVIAGSPN--RLKLAEEI----GADL-TLNRRETSVEERRKAIMDITH 97 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHT--TBSEEEEEESCHH--HHHHHHHT----TCSE-EEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-Cccchhheeccccc--ccccccccccccc--cccccccc----cceE-EEeccccchHHHHHHHHHhhC
Confidence 3579999996 89999999999888 66 8999998642 22111111 1111 123332 222 333333
Q ss_pred cCCCCEEEEcCcc
Q 035631 84 SEGIDTIMHFAAQ 96 (684)
Q Consensus 84 ~~~~d~Vih~a~~ 96 (684)
..++|+||.++|.
T Consensus 98 ~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 98 GRGADFILEATGD 110 (182)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCceEEeecCCc
Confidence 4579999999875
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=91.74 E-value=0.079 Score=45.71 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=26.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF 400 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~ 400 (684)
.+|||+||+|-+|...++.....|.+|..
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~ 59 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVG 59 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEEE
Confidence 48999999999999999999999998843
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.73 E-value=0.23 Score=42.06 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r 46 (684)
|++||.|-| .|-||+.+++.|+++. ..+|+++..
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~-dieiVaINd 34 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQD-DMELIGITK 34 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEEE
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCC-CceEEEEec
Confidence 568999999 7999999999998764 688888864
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.68 E-value=0.19 Score=39.06 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=44.2
Q ss_pred ceEEEEEcCCc----------chhHHHHHHHHhcCCeEeeeeccC-----------------CChhHHHHHHHhcCCCeE
Q 035631 371 RLKFLIYGKTG----------WIGGLLGKYCKDKGIAFEFGTGRL-----------------EDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 371 ~m~ilItG~~G----------~iG~~l~~~L~~~g~~v~~~~~d~-----------------~d~~~~~~~~~~~~~d~V 423 (684)
..||||+|+.. |-+.+.++.|.+.|+++..+..+. ...+.+.++++..+||.|
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~E~p~~i 83 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGV 83 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHHhCCCEE
Confidence 45899999743 789999999999999985544431 256777888888899988
Q ss_pred EEcce
Q 035631 424 LNAAG 428 (684)
Q Consensus 424 ih~a~ 428 (684)
+-..|
T Consensus 84 i~~~G 88 (121)
T d1a9xa4 84 IVQYG 88 (121)
T ss_dssp ECSSS
T ss_pred Eeehh
Confidence 76444
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=91.65 E-value=0.31 Score=41.42 Aligned_cols=72 Identities=11% Similarity=0.175 Sum_probs=46.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
.+|-|.| .|.+|..+++.|+++ |++|++.+|++. +.+.+......... . . .....+.+...+ ..+|.+|-
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~--G~~V~v~dr~~~--~~~~l~~~~~~~~~-~-~-~a~~~~~~~~~~--~~~~~ii~ 72 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDH--GFVVCAFNRTVS--KVDDFLANEAKGTK-V-L-GAHSLEEMVSKL--KKPRRIIL 72 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSTH--HHHHHHHTTTTTSS-C-E-ECSSHHHHHHHB--CSSCEEEE
T ss_pred CcEEEEe-EhHHHHHHHHHHHHC--CCeEEEEcCCHH--HHHHHHHhcccccc-c-c-chhhhhhhhhhh--cccceEEE
Confidence 4799999 799999999999999 899999999752 22222111111011 1 1 123455566666 78888886
Q ss_pred cC
Q 035631 93 FA 94 (684)
Q Consensus 93 ~a 94 (684)
+.
T Consensus 73 ~~ 74 (176)
T d2pgda2 73 LV 74 (176)
T ss_dssp CS
T ss_pred ec
Confidence 54
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=91.63 E-value=0.091 Score=44.24 Aligned_cols=33 Identities=27% Similarity=0.525 Sum_probs=30.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||-|.| .|.+|+.+++.|+++ |++|++.+|++
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~--G~~V~~~d~~~ 33 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNP 33 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHC--CCeEEEEeCCc
Confidence 6899998 799999999999999 89999999974
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=91.44 E-value=0.16 Score=42.85 Aligned_cols=35 Identities=31% Similarity=0.449 Sum_probs=31.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+.+|||+||+|-+|...++..... |.+|++.++++
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~ 58 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNR 58 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSS
T ss_pred CCEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCH
Confidence 347999999999999999988888 89999999964
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=90.74 E-value=0.45 Score=35.39 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=25.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
+||+|.|. |-.|..++++|.++|.+|....
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D 35 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMD 35 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCCCEEEEee
Confidence 48999996 7789999999999999986554
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=90.61 E-value=0.3 Score=41.18 Aligned_cols=74 Identities=19% Similarity=0.095 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
.+.+|+|.|+ |-+|...++.+... |.++++++++... ....... +... ..|..+.+...... .++|++
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~~~--~~~a~~l----Gad~-~i~~~~~~~~~~~~--~~~D~v 97 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAK--REAAKAL----GADE-VVNSRNADEMAAHL--KSFDFI 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGG--HHHHHHH----TCSE-EEETTCHHHHHTTT--TCEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcc--cccchhhccchhH--HHHHhcc----CCcE-EEECchhhHHHHhc--CCCcee
Confidence 3578999986 88999999888877 8889998886432 1111111 1221 24666666554443 689999
Q ss_pred EEcCcc
Q 035631 91 MHFAAQ 96 (684)
Q Consensus 91 ih~a~~ 96 (684)
|.+.+.
T Consensus 98 id~~g~ 103 (168)
T d1uufa2 98 LNTVAA 103 (168)
T ss_dssp EECCSS
T ss_pred eeeeec
Confidence 999874
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.43 E-value=0.15 Score=42.35 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=29.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|.| .|.+|+.+++.|+++ |++|++.++..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~--g~~v~~~~~~~ 33 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSR--GVEVVTSLEGR 33 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHT--TCEEEECCTTC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHC--CCeEEEEcCch
Confidence 6899998 799999999999999 89999988754
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=90.37 E-value=0.28 Score=41.49 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=22.1
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcC
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKG 395 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g 395 (684)
|++|||.|.| +|.+|+..++.|.+..
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~~ 26 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQP 26 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTCS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhCC
Confidence 4568999999 7999999999998753
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.27 E-value=0.16 Score=43.31 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=26.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF 400 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~ 400 (684)
.+|||+||+|-+|...++.+...|.+|..
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~ 58 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILG 58 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeccccccccccccccccCccccc
Confidence 48999999999999999999999998743
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=90.23 E-value=0.19 Score=42.46 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=40.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eEeeeeccCCChhHHHHHHH--------hcCCCeEEEcce
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AFEFGTGRLEDKNSLLDDMK--------RVRPTHVLNAAG 428 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v~~~~~d~~d~~~~~~~~~--------~~~~d~Vih~a~ 428 (684)
++|+|+| +|-.|+.++..|.+.|. ++.++.++....+.+.+.+. ..+.|.||++..
T Consensus 18 ~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliINaTp 82 (167)
T d1npya1 18 AKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNVTS 82 (167)
T ss_dssp SCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhheeccc
Confidence 4899999 58899999999999996 67776666544444444332 124689999754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=90.03 E-value=0.9 Score=33.85 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
...++|.+.|-.|-==++|++.|.++ |++|.+.|+..+.. .+.+. ..++.+..++-. + .+ .++|.
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~--G~~VsGSD~~~~~~-~~~L~----~~Gi~v~~g~~~--~----~i--~~~d~ 70 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVV-TQRLA----QAGAKIYIGHAE--E----HI--EGASV 70 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHH-HHHHH----HTTCEEEESCCG--G----GG--TTCSE
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhC--CCEEEEEeCCCChh-hhHHH----HCCCeEEECCcc--c----cC--CCCCE
Confidence 35589999985554447789999999 99999999864322 12221 235666554431 1 23 57899
Q ss_pred EEEcCccC
Q 035631 90 IMHFAAQT 97 (684)
Q Consensus 90 Vih~a~~~ 97 (684)
||...+..
T Consensus 71 vV~S~AI~ 78 (96)
T d1p3da1 71 VVVSSAIK 78 (96)
T ss_dssp EEECTTSC
T ss_pred EEECCCcC
Confidence 99887753
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=89.89 E-value=0.17 Score=41.92 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=30.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.+.| +|-+|+++++.|++.+ +++|++.+|++
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~-~~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQG-GYRIYIANRGA 34 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHC-SCEEEEECSSH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCC-CCcEEEEeCCh
Confidence 6899998 5999999999999984 48999999974
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=89.77 E-value=0.25 Score=39.08 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=31.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++|+|.| .|++|-.++..|.+. |.+|+.+.+.+
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~--g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTA--GVHVSLVETQP 63 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcc--cceEEEEeecc
Confidence 47899999 699999999999999 89999999864
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=89.74 E-value=0.23 Score=42.01 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=22.2
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcC
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKG 395 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g 395 (684)
|+|||.|-| .|=||+.+++.|.+++
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~ 25 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQD 25 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCC
Confidence 567999999 7999999999998765
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=89.61 E-value=0.17 Score=42.01 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=30.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.+.| +|-+|+++++.|++. ++++++.+|+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~--~~~i~v~~r~~ 33 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSL 33 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhC--CCeEEEEcChH
Confidence 6899998 899999999999998 89999999864
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.56 E-value=0.13 Score=44.23 Aligned_cols=28 Identities=25% Similarity=0.156 Sum_probs=25.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE 399 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~ 399 (684)
.+|||+||+|-+|...++.+...|.+|.
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi 54 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIY 54 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCCCcccccchhhccccccce
Confidence 4899999999999999999999999873
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.47 E-value=0.28 Score=38.41 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..++|+|.| .|++|-.++..|.+. |.+|+++.|.+
T Consensus 21 ~p~~v~IiG-gG~ig~E~A~~l~~~--G~~Vtlve~~~ 55 (117)
T d1ebda2 21 VPKSLVVIG-GGYIGIELGTAYANF--GTKVTILEGAG 55 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred cCCeEEEEC-CCccceeeeeeeccc--ccEEEEEEecc
Confidence 347999999 699999999999999 89999999864
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.12 E-value=0.17 Score=43.81 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=29.1
Q ss_pred CceEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|..||.|.|+ |.+|+.++..++..|++|..+..|
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~ 36 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQT 36 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECC
Confidence 3348999995 999999999999999999876544
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.09 E-value=0.3 Score=38.60 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..++++|.| .|++|-.++..|.+. |.+|+.+.+.+
T Consensus 22 ~p~~~vIiG-~G~ig~E~A~~l~~l--G~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIG-GGIIGLEMGSVYSRL--GSKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCCeEEEEC-CCchHHHHHHHHHhh--CcceeEEEecc
Confidence 357999999 699999999999999 99999999864
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.92 E-value=0.21 Score=39.16 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=27.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
.+++|.| .|++|-.++..|.+.|.+|+++.
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve 52 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILE 52 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEE
Confidence 4899999 89999999999999999998775
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.84 E-value=0.21 Score=42.29 Aligned_cols=77 Identities=16% Similarity=0.280 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCCHH---HHHHhhccCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITCAD---LMNYLLVSEG 86 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d~~---~~~~~~~~~~ 86 (684)
...+|+|+|++|-+|...++.+...+ ..+|++.++++. +.+.+... +. .++ |..+.+ .+.+.....+
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g-~~~V~~~~~~~~--~~~~~~~~----Ga~~~i--~~~~~~~~~~~~~~~~~~~ 97 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREE--AVEAAKRA----GADYVI--NASMQDPLAEIRRITESKG 97 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHH--HHHHHHHH----TCSEEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEEeccccceeeeeecccccc-cccccccccchh--hHHHHHHc----CCceee--ccCCcCHHHHHHHHhhccc
Confidence 34689999999999999999998883 358999988642 22111111 11 223 333332 3333333457
Q ss_pred CCEEEEcCcc
Q 035631 87 IDTIMHFAAQ 96 (684)
Q Consensus 87 ~d~Vih~a~~ 96 (684)
+|+||.+++.
T Consensus 98 ~d~vid~~g~ 107 (170)
T d1jvba2 98 VDAVIDLNNS 107 (170)
T ss_dssp EEEEEESCCC
T ss_pred chhhhccccc
Confidence 9999999874
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=88.72 E-value=0.37 Score=37.72 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=31.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++|+|.| .|++|-.++..|.+. |.+|+.+.|.+
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~--g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRL--GIDSYIFARGN 55 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhc--cccceeeehhc
Confidence 57999999 699999999999998 89999999864
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.62 E-value=0.35 Score=38.28 Aligned_cols=35 Identities=23% Similarity=0.559 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..++|+|.| .|++|-.++..|.+. |.+|+.+.+.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~--g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKA--GKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhcc--ceEEEEEEecC
Confidence 457999998 699999999999999 89999998864
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=88.58 E-value=0.13 Score=44.08 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=27.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
|||-|+| .|..|..+++.|+++||+|.....
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr 32 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR 32 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEEC
Confidence 7999999 999999999999999999976543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.50 E-value=0.32 Score=38.00 Aligned_cols=34 Identities=21% Similarity=0.467 Sum_probs=30.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++|+|.| .|++|-.++..|.+. |.+|.++.|.+
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~--G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGL--GAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhcc--ccEEEEEeecc
Confidence 47899999 699999999999999 89999999864
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=88.50 E-value=0.15 Score=43.91 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=30.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+||.|.|| |.+|+.++..++.+ |++|++.++++
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASK--GTPILMKDINE 37 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CEEEEECc-CHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 67999996 99999999999999 89999999964
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=88.43 E-value=1 Score=40.35 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=55.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eEeeeeccCC-------------------ChhHHHHHHHhcCCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AFEFGTGRLE-------------------DKNSLLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v~~~~~d~~-------------------d~~~~~~~~~~~~~d~Vih~a~~~~ 431 (684)
.||+|.| .|-+|++++..|...|. +++.+..|.- ..+.+.+.++...|++-|..-...
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~- 108 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL- 108 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC-
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh-
Confidence 4899999 67799999999999997 2333333321 112233344555566554432211
Q ss_pred CCCccccccchhhH---------hhhchhhhHHHHHHHHHcCCeEEEEecceeee
Q 035631 432 RPNVDWCESHRVET---------IRTNVMGTLTLADVCKEKNVLLMNFATGCIYE 477 (684)
Q Consensus 432 ~~~~~~~~~~~~~~---------~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~ 477 (684)
. ...+.... ...|...-..+-++|.++++++|+.+....+|
T Consensus 109 ---~--~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~i~g~~~~~~g 158 (247)
T d1jw9b_ 109 ---L--DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEG 158 (247)
T ss_dssp ---C--CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred ---h--hhccccccccccceeeeccchhhhhhhHHHHHHHhCCCccccccccccc
Confidence 0 00011000 01123334466778888899999877766555
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.42 E-value=1 Score=34.99 Aligned_cols=33 Identities=21% Similarity=0.484 Sum_probs=29.3
Q ss_pred CEEEEEcCC---chhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 13 KKILITGAA---GFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 13 ~~VlItGat---G~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
|+|.|.|++ |..|..+++.|++. |++|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccc
Confidence 689999998 88999999999999 8899988653
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=88.37 E-value=0.31 Score=42.54 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=47.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc-CCCcccccccCCC---CCCCCCceEEEe-cCCCHHHHHHhhccCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHP---SRASPNFKFLKG-DITCADLMNYLLVSEGI 87 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~l~~---~~~~~~~~~~~~-Dl~d~~~~~~~~~~~~~ 87 (684)
|||++.| ++..|..+++.|+++ |++|.++. +.+.......... .....++.++.. ++.+.+ +.+.+...++
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~--g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~-~~~~i~~~~~ 76 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAA--GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPL-WVERIAQLSP 76 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHT--TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHH-HHHHHHHTCC
T ss_pred CeEEEEe-cCHHHHHHHHHHHHC--CCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchh-hhhhhhhhcc
Confidence 6899997 566899999999999 78887654 3221111000000 001124555553 454544 4455666899
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|++|-+.+.
T Consensus 77 Dlii~~g~~ 85 (203)
T d2blna2 77 DVIFSFYYR 85 (203)
T ss_dssp SEEEEESCC
T ss_pred cceeeeecc
Confidence 999977653
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=88.36 E-value=0.89 Score=38.88 Aligned_cols=36 Identities=22% Similarity=0.179 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
...++|.|.| .|.||+.+++.|..- |.+|+..++..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 77 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESL--GMYVYFYDIEN 77 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred ccceEEEEee-cccchhhhhhhcccc--cceEeeccccc
Confidence 3568999998 899999999999877 89999999853
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.34 E-value=0.079 Score=45.28 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=29.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
|-||.|-| .|-||+.+++.|.++. +.+|+++...
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~-dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP-DMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC-CCEEEEEECC
Confidence 35899998 8999999999999874 7899998654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.32 E-value=1.2 Score=37.07 Aligned_cols=84 Identities=11% Similarity=0.082 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
...+++|+|.|-+.-+|+.++..|+++ |..|...+...... ... .....-.........-...+.+.+.. ..+|
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~--gaTVt~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~lk~~~--~~aD 99 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQK-FTR-GESLKLNKHHVEDLGEYSEDLLKKCS--LDSD 99 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEE-EES-CCCSSCCCCEEEEEEECCHHHHHHHH--HHCS
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHC--CCEEEEeccccccc-ccc-ccceeeeeeccccccccchhHHhhcc--ccCC
Confidence 346799999999999999999999999 88998887642111 111 00000001111111113355566655 5899
Q ss_pred EEEEcCccCC
Q 035631 89 TIMHFAAQTH 98 (684)
Q Consensus 89 ~Vih~a~~~~ 98 (684)
+||..+|...
T Consensus 100 IvIsavG~p~ 109 (171)
T d1edza1 100 VVITGVPSEN 109 (171)
T ss_dssp EEEECCCCTT
T ss_pred EEEEccCCCc
Confidence 9998888654
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.22 E-value=0.55 Score=46.07 Aligned_cols=25 Identities=32% Similarity=0.329 Sum_probs=22.0
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGI 396 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~ 396 (684)
.+||||.|+ |-+|.++++.|...|.
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gv 61 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGF 61 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCC
Confidence 459999996 5599999999999997
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=88.13 E-value=0.31 Score=38.90 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=48.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
+.|+|.| -|-+|+.+++.|.. ++|++++..+. ....+ ...++.++.+|..+++.+.++- -.+++.+|=
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~----~~i~vi~~d~~--~~~~~----~~~~~~~i~Gd~~~~~~L~~a~-i~~A~~vi~ 68 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRG----SEVFVLAEDEN--VRKKV----LRSGANFVHGDPTRVSDLEKAN-VRGARAVIV 68 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCG----GGEEEEESCTT--HHHHH----HHTTCEEEESCTTSHHHHHHTT-CTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHcC----CCCEEEEcchH--HHHHH----HhcCccccccccCCHHHHHHhh-hhcCcEEEE
Confidence 4588998 58899999999953 45666666432 11111 1347889999999999888763 367888884
Q ss_pred c
Q 035631 93 F 93 (684)
Q Consensus 93 ~ 93 (684)
+
T Consensus 69 ~ 69 (129)
T d2fy8a1 69 N 69 (129)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=87.98 E-value=0.43 Score=37.45 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.+++++|.| .|+||-.++..|.+. |.+|+.+.+..
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~~~--G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWARL--GAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHHHc--CCceEEEEeec
Confidence 458999999 699999999999999 89999999864
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=87.97 E-value=0.23 Score=42.15 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=47.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
..+|+|.|+ |.+|...++.+...+ ...|++.++++. ++...+.. ...+++..+-.+.+...+.....++|+||
T Consensus 33 g~~vli~Ga-G~vG~~~~~~a~~~g-~~~vv~~~~~~~--k~~~~~~~---ga~~~i~~~~~~~~~~~~~~~~~g~d~vi 105 (172)
T d1h2ba2 33 GAYVAIVGV-GGLGHIAVQLLKVMT-PATVIALDVKEE--KLKLAERL---GADHVVDARRDPVKQVMELTRGRGVNVAM 105 (172)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHC-CCEEEEEESSHH--HHHHHHHT---TCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEeCC-ChHHHHHHHHHHhhc-CcccccccchhH--HHHHHhhc---ccceeecCcccHHHHHHHhhCCCCceEEE
Confidence 468999985 999999999887774 357788887642 22222111 12234332222233344444446799999
Q ss_pred EcCcc
Q 035631 92 HFAAQ 96 (684)
Q Consensus 92 h~a~~ 96 (684)
.++|.
T Consensus 106 d~~g~ 110 (172)
T d1h2ba2 106 DFVGS 110 (172)
T ss_dssp ESSCC
T ss_pred EecCc
Confidence 99884
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=87.94 E-value=0.31 Score=41.27 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=26.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFG 401 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~ 401 (684)
.+|||+||+|-+|...++.++..|.+|...
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~ 58 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLAA 58 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeccccchhhhhhhhcccccccccc
Confidence 489999999999999999999999987443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=87.89 E-value=0.47 Score=39.36 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=43.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
++|+|.|.+..+|+.|+..|.++|..|+.....- ..+.+..+.. |+||.++|..
T Consensus 38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t---~~l~~~~~~A--DivI~a~G~p 91 (166)
T d1b0aa1 38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---KNLRHHVENA--DLLIVAVGKP 91 (166)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---SCHHHHHHHC--SEEEECSCCT
T ss_pred ceEEEEeccccccHHHHHHHHHhhcccccccccc---chhHHHHhhh--hHhhhhccCc
Confidence 4899999999999999999999999997654332 2344566777 9999999943
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=87.83 E-value=0.41 Score=37.26 Aligned_cols=35 Identities=17% Similarity=0.425 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.+++++|.| .|++|-.++..|.+. |.+|+++.+.+
T Consensus 20 ~p~~vvIiG-gG~~G~E~A~~l~~~--g~~Vtlve~~~ 54 (115)
T d1lvla2 20 LPQHLVVVG-GGYIGLELGIAYRKL--GAQVSVVEARE 54 (115)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHhhc--ccceEEEeeec
Confidence 347899999 699999999999999 89999999864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=87.63 E-value=0.34 Score=41.00 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=32.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+|||+|.| .|+.|-.++..|.+.++..+|+++++.+
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 58999999 6999999999999997678999998764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=87.59 E-value=0.29 Score=38.62 Aligned_cols=31 Identities=26% Similarity=0.368 Sum_probs=27.8
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+++|.| .|++|-.++..|.++|.+|+++..
T Consensus 31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~ 61 (121)
T d1d7ya2 31 SRLLIVG-GGVIGLELAATARTAGVHVSLVET 61 (121)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEC-cchhHHHHHHHhhcccceEEEEee
Confidence 4899998 899999999999999999987654
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.27 E-value=0.43 Score=38.31 Aligned_cols=34 Identities=26% Similarity=0.573 Sum_probs=31.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++|+|.| +|++|-.++..|.+. |.+|..+.+.+
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~--g~~Vtvie~~~ 68 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKA--NMHVTLLDTAA 68 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhh--Ccceeeeeecc
Confidence 57999999 699999999999999 89999999864
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=87.24 E-value=1.1 Score=32.88 Aligned_cols=70 Identities=17% Similarity=0.110 Sum_probs=46.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
|||.++|-.|-==+.|++.|.++ |+.|.+.|+..+ .....|. ..++.+..+. +.+ -+ .++|.||.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~--G~~VsGSD~~~~-~~t~~L~----~~Gi~i~~gh--~~~----~i--~~~d~vV~ 66 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN--GNDVYGSNIEET-ERTAYLR----KLGIPIFVPH--SAD----NW--YDPDLVIK 66 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSSCC-HHHHHHH----HTTCCEESSC--CTT----SC--CCCSEEEE
T ss_pred cEEEEEeECHHHHHHHHHHHHhC--CCeEEEEeCCCC-hhHHHHH----HCCCeEEeee--ccc----cc--CCCCEEEE
Confidence 78999987665556789999999 999999998743 2222232 2355554432 111 12 57899998
Q ss_pred cCccC
Q 035631 93 FAAQT 97 (684)
Q Consensus 93 ~a~~~ 97 (684)
..+..
T Consensus 67 SsAI~ 71 (89)
T d1j6ua1 67 TPAVR 71 (89)
T ss_dssp CTTCC
T ss_pred ecCcC
Confidence 88764
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=87.23 E-value=1.1 Score=35.92 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=30.4
Q ss_pred CCEEEEEcCC---chhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 12 PKKILITGAA---GFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGat---G~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
.++|.|.||+ +-.|..+++.|.+. |++|+.+...
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~ 55 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPK 55 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTT
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCc
Confidence 4789999999 89999999999999 8899988753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=87.20 E-value=0.5 Score=39.21 Aligned_cols=58 Identities=10% Similarity=0.192 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCE
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDT 89 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (684)
..+++|+|.|.+..+|+.++..|.++ +..|+....... | +.... .+.|+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~---------------------~------l~~~~--~~ADi 83 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTK---------------------N------LRHHV--ENADL 83 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCS---------------------C------HHHHH--HHCSE
T ss_pred cccceEEEEeccccccHHHHHHHHHh--hccccccccccc---------------------h------hHHHH--hhhhH
Confidence 35799999999999999999999998 889988876420 1 12223 57899
Q ss_pred EEEcCccCC
Q 035631 90 IMHFAAQTH 98 (684)
Q Consensus 90 Vih~a~~~~ 98 (684)
||.++|...
T Consensus 84 vI~a~G~p~ 92 (166)
T d1b0aa1 84 LIVAVGKPG 92 (166)
T ss_dssp EEECSCCTT
T ss_pred hhhhccCcc
Confidence 999998654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=87.09 E-value=0.21 Score=42.61 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=47.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
.+|||+||+|-+|...++..... |.+|+++++++. +...+... +...+ .|..+.+ ..+.+.....|.||+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~--k~~~~~~l----Gad~v-i~~~~~~-~~~~l~~~~~~~vvD 102 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRES--THEYLKSL----GASRV-LPRDEFA-ESRPLEKQVWAGAID 102 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGG--GHHHHHHH----TEEEE-EEGGGSS-SCCSSCCCCEEEEEE
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchh--HHHHHHhh----ccccc-cccccHH-HHHHHHhhcCCeeEE
Confidence 48999999999999999998888 899999998642 22112111 22222 2332222 223344456788988
Q ss_pred cCc
Q 035631 93 FAA 95 (684)
Q Consensus 93 ~a~ 95 (684)
+.+
T Consensus 103 ~Vg 105 (177)
T d1o89a2 103 TVG 105 (177)
T ss_dssp SSC
T ss_pred Ecc
Confidence 776
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.04 E-value=0.38 Score=37.95 Aligned_cols=33 Identities=24% Similarity=0.526 Sum_probs=30.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
++|+|.| .|++|-.++..|.+. |.+|+.+.|.+
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~--g~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEA--GYHVKLIHRGA 65 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CcEEEEC-CcHHHHHHHHHhhcc--cceEEEEeccc
Confidence 6899999 699999999999999 89999999864
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.97 E-value=0.29 Score=40.33 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r 46 (684)
..+++|||.|| |.+|..-++.|++. |-+|++++.
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~--GA~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPT--GCKLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGG--TCEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeC
Confidence 45799999996 99999999999999 788888854
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.82 E-value=0.46 Score=37.67 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++|+|.| .|++|-.++..|.+. |.+|+.+.|++
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~--G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSAL--GSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcC--CcEEEEEeecc
Confidence 47999999 699999999999999 89999999964
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.77 E-value=0.36 Score=41.82 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||+|.| .|++|-.++..|.+.+++.+|+.+.|..
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6899999 5999999999999987788999998864
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=86.72 E-value=0.3 Score=41.54 Aligned_cols=79 Identities=11% Similarity=0.028 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEE-ecCCC-HHHHHHhhccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK-GDITC-ADLMNYLLVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~-~Dl~d-~~~~~~~~~~~~~d 88 (684)
.+.+|+|.|+ |-+|...+..+...+ ..+|+++++++..... .... .-...+. .+-.+ ...........++|
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g-~~~Vi~~~~~~~k~~~--a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D 100 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAG-AARIIGVDINKDKFAK--AKEV---GATECVNPQDYKKPIQEVLTEMSNGGVD 100 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGGHHH--HHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcC-CceEEeecCcHHHHHH--HHHh---CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence 3478999998 558999998888873 4699999987532211 1111 1112221 12222 33444445556899
Q ss_pred EEEEcCcc
Q 035631 89 TIMHFAAQ 96 (684)
Q Consensus 89 ~Vih~a~~ 96 (684)
+||.+.|.
T Consensus 101 ~vid~~G~ 108 (176)
T d2jhfa2 101 FSFEVIGR 108 (176)
T ss_dssp EEEECSCC
T ss_pred EEEecCCc
Confidence 99999874
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.68 E-value=0.82 Score=38.14 Aligned_cols=36 Identities=11% Similarity=0.282 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
..+++|+|.|-+..+|+.|+..|+++ |..|..++..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~ 72 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK 72 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT
T ss_pred cccceEEEEecCCccchHHHHHHHhc--cCceEEEecc
Confidence 46799999999999999999999999 8999988774
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.45 E-value=0.56 Score=34.34 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=36.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc--------CCChhHHHHHHHhcCCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR--------LEDKNSLLDDMKRVRPTHV 423 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d--------~~d~~~~~~~~~~~~~d~V 423 (684)
|||||.| +|-=-.+|+..|.+..+++....++ ..+.+....+....++|.|
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~G~~~~~~~~~~~~~~~~~~~~~idlv 59 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNAGTKRDGTNHPYEGEKTLKAIPEEDIV 59 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCTTGGGTSEECCCCTHHHHHTSCSSCEE
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCccccccceeccchhhHHHHHhccceeE
Confidence 7999999 6767788999999989888655443 1244555566666666765
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=86.33 E-value=0.42 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.474 Sum_probs=30.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
.+||+|.| .|..|-..+..|.++ |++|.+++|.
T Consensus 6 ~~kVvVIG-aGiaGl~~A~~L~~~--G~~V~vier~ 38 (268)
T d1c0pa1 6 QKRVVVLG-SGVIGLSSALILARK--GYSVHILARD 38 (268)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 36899999 699999999999999 8999999985
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=86.18 E-value=0.28 Score=38.49 Aligned_cols=32 Identities=28% Similarity=0.176 Sum_probs=28.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
..+|+|.| .|++|-.++..|.+.|.+|+++..
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~ 53 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFAR 53 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeeh
Confidence 35899999 799999999999999999987763
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=86.12 E-value=0.23 Score=42.16 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=47.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCCC---HHHHHHhhccCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC---ADLMNYLLVSEGI 87 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~ 87 (684)
+.+|+|.|+ |-+|...++.+... |. +|+++++++.. +...... .-.++ .|..+ .+.+.+.....++
T Consensus 28 g~~VlI~Ga-G~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r--~~~a~~l---Ga~~~--i~~~~~~~~~~v~~~t~g~G~ 97 (174)
T d1jqba2 28 GSSVVVIGI-GAVGLMGIAGAKLR--GAGRIIGVGSRPIC--VEAAKFY---GATDI--LNYKNGHIEDQVMKLTNGKGV 97 (174)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHTT--TCSCEEEECCCHHH--HHHHHHH---TCSEE--ECGGGSCHHHHHHHHTTTSCE
T ss_pred CCEEEEEcC-Ccchhhhhhhhhcc--cccccccccchhhh--HHHHHhh---Ccccc--ccccchhHHHHHHHHhhccCc
Confidence 468999985 99999999888877 64 79999986421 1111111 00122 23333 3334455444579
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|+||.++|.
T Consensus 98 D~vid~~g~ 106 (174)
T d1jqba2 98 DRVIMAGGG 106 (174)
T ss_dssp EEEEECSSC
T ss_pred ceEEEccCC
Confidence 999999985
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=86.09 E-value=0.41 Score=37.58 Aligned_cols=32 Identities=25% Similarity=0.204 Sum_probs=28.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
.+++|.| +|+||-.++..|.+.|.+|+.+...
T Consensus 23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~ 54 (119)
T d3lada2 23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAM 54 (119)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEC-CChHHHHHHHHHHHcCCceEEEEee
Confidence 4899999 8999999999999999999887643
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.08 E-value=0.69 Score=40.19 Aligned_cols=55 Identities=9% Similarity=0.082 Sum_probs=39.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec-----------------------------cCCChhHHHHHHHhcCCCe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG-----------------------------RLEDKNSLLDDMKRVRPTH 422 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~-----------------------------d~~d~~~~~~~~~~~~~d~ 422 (684)
|||++.|. +-.|..+++.|.+.|+++..+.. ++ +.+.+.+.++..++|.
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~-~~~~~~~~i~~~~~Dl 78 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV-NHPLWVERIAQLSPDV 78 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC-CSHHHHHHHHHTCCSE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccc-cchhhhhhhhhhcccc
Confidence 79999975 55799999999999998743321 12 2344556677788998
Q ss_pred EEEcce
Q 035631 423 VLNAAG 428 (684)
Q Consensus 423 Vih~a~ 428 (684)
+|-+.+
T Consensus 79 ii~~g~ 84 (203)
T d2blna2 79 IFSFYY 84 (203)
T ss_dssp EEEESC
T ss_pred eeeeec
Confidence 887765
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.78 E-value=0.4 Score=37.83 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=28.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+++|.| +|+||-.++..|.+.|.+|+.+..
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~ 54 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEF 54 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEEC-CCchHHHHHHHHHhhCcceeEEEe
Confidence 4899999 899999999999999999987653
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.73 E-value=0.4 Score=41.53 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=27.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
|||.|.| .|++|..++..| ++ |++|+++|.++
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~--g~~V~g~Din~ 32 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SL--QNEVTIVDILP 32 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TT--TSEEEEECSCH
T ss_pred CEEEEEC-CChhHHHHHHHH-HC--CCcEEEEECCH
Confidence 6899997 899999998655 66 89999999864
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=85.51 E-value=0.54 Score=33.42 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=30.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCCh
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDK 408 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~ 408 (684)
++|.|.| +|++|+-++..-.+-|++|.++.-|-.++
T Consensus 2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p 37 (78)
T d3etja2 2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA 37 (78)
T ss_dssp EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence 5899999 89999999999999999998877665443
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.41 E-value=0.91 Score=45.87 Aligned_cols=103 Identities=14% Similarity=0.080 Sum_probs=58.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eEeeeeccCCChhH-------------------HHHHHHhcCCCeEEEcceecC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AFEFGTGRLEDKNS-------------------LLDDMKRVRPTHVLNAAGITG 431 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v~~~~~d~~d~~~-------------------~~~~~~~~~~d~Vih~a~~~~ 431 (684)
.+|+|.|+ |-+|.++++.|.-.|. .++++..|..+.+. +.+.+....|++-++..-..
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~- 103 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES- 103 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC-
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC-
Confidence 48999996 6699999999999996 44444444322222 22334444455432211100
Q ss_pred CCCccccccch------h--hHhhhchhhhHHHHHHHHHcCCeEEEEecceeeec
Q 035631 432 RPNVDWCESHR------V--ETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEY 478 (684)
Q Consensus 432 ~~~~~~~~~~~------~--~~~~~nv~~~~~ll~~~~~~~~~~i~~SS~~vy~~ 478 (684)
...+...++ . -.-..|......+-+.|+++++++|.+.|.+.||.
T Consensus 104 --~~~~~~~~~~~~~~~dvVv~~~~~~~~~~~l~~~c~~~~ip~i~~~~~G~~G~ 156 (529)
T d1yova1 104 --PENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGY 156 (529)
T ss_dssp --HHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHHTCCEEEEEEETTEEE
T ss_pred --chhhhhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence 000000000 0 01123344456688999999999999999887773
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=85.25 E-value=0.39 Score=37.91 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=28.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
.+++|.| .|+||-.++..|.+.|.+|+++..+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 3799999 8999999999999999999888654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=85.19 E-value=0.64 Score=38.25 Aligned_cols=53 Identities=15% Similarity=0.148 Sum_probs=37.4
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE----------------------eeeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF----------------------EFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
.|+|.| .|-+|..+++.|.++|++| .++.+|.+|.+.+.++--+ +.+.||=+.
T Consensus 5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~-~a~~vi~~~ 79 (153)
T d1id1a_ 5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID-RCRAILALS 79 (153)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT-TCSEEEECS
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccc-cCCEEEEcc
Confidence 689999 5899999999999999876 4566777777766554221 235665443
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.88 E-value=1.1 Score=35.15 Aligned_cols=57 Identities=19% Similarity=0.221 Sum_probs=45.0
Q ss_pred eEEEEEcCC----------cchhHHHHHHHHhcCCeEeeeecc-----------------CCChhHHHHHHHhcCCCeEE
Q 035631 372 LKFLIYGKT----------GWIGGLLGKYCKDKGIAFEFGTGR-----------------LEDKNSLLDDMKRVRPTHVL 424 (684)
Q Consensus 372 m~ilItG~~----------G~iG~~l~~~L~~~g~~v~~~~~d-----------------~~d~~~~~~~~~~~~~d~Vi 424 (684)
.||||+|+. -|-+.+.++.|.+.|+++..+..+ -...+.+.++++..+||.|+
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~pd~il 87 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVL 87 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhCcCCeE
Confidence 589999973 467999999999999998554443 23677888899999999998
Q ss_pred Ecce
Q 035631 425 NAAG 428 (684)
Q Consensus 425 h~a~ 428 (684)
-..|
T Consensus 88 ~~~G 91 (127)
T d1a9xa3 88 PTMG 91 (127)
T ss_dssp CSSS
T ss_pred EEee
Confidence 6544
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=84.83 E-value=0.46 Score=40.21 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHh--hccCCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYL--LVSEGID 88 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~~~d 88 (684)
.+.+|+|.|+ |-+|...++.+...+ ...|++.++++. ++...+.. .-.+++ |..+.+..+++ +...++|
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g-~~~v~~~~~~~~--k~~~a~~~---Ga~~~i--~~~~~~~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCG-ASIIIAVDIVES--RLELAKQL---GATHVI--NSKTQDPVAAIKEITDGGVN 98 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHT-CSEEEEEESCHH--HHHHHHHH---TCSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccc-cceeeeeccHHH--HHHHHHHc---CCeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence 3578999996 999999999888873 235666666531 11111111 112333 44443333322 2234799
Q ss_pred EEEEcCcc
Q 035631 89 TIMHFAAQ 96 (684)
Q Consensus 89 ~Vih~a~~ 96 (684)
+||.+.|.
T Consensus 99 ~vid~~G~ 106 (174)
T d1f8fa2 99 FALESTGS 106 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCc
Confidence 99999874
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=84.77 E-value=0.41 Score=43.32 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=29.8
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
.+||+|+| .|..|-..+.+|.++|++|.++..+
T Consensus 6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence 35899999 8999999999999999999988754
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=84.43 E-value=0.93 Score=38.04 Aligned_cols=18 Identities=6% Similarity=-0.069 Sum_probs=13.5
Q ss_pred chhhhHHHHHHHHHcCCe
Q 035631 449 NVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 449 nv~~~~~ll~~~~~~~~~ 466 (684)
|+.-...+++.+.++..+
T Consensus 127 n~~i~~~i~~~i~~~~p~ 144 (171)
T d1obba1 127 QLKYFVDIARKIEKLSPK 144 (171)
T ss_dssp HHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHHHCcC
Confidence 666678888888887654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=84.41 E-value=0.49 Score=40.88 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..+++|.|.| .|.||+.+++.|..- |.+|++.++..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~f--g~~V~~~d~~~ 76 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGF--GAKVITYDIFR 76 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhh--cccccccCccc
Confidence 3468999999 899999999999877 89999998753
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=84.39 E-value=0.67 Score=36.64 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=31.1
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.++++|.| .|+||-.++..|.+. |.+|+.+.+.+
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~--G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTL--GSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcC--CCEEEEEEeec
Confidence 47899999 699999999999999 89999999864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.39 E-value=0.53 Score=37.07 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
.+++++|.| .|+||-.++..|.+. |.+|+.+.|+
T Consensus 19 ~P~~vvIIG-gG~iG~E~A~~l~~l--G~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVG-ASYVALECAGFLAGI--GLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEEC-CSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CCCeEEEEC-CCccHHHHHHHHhhc--CCeEEEEEec
Confidence 347899999 699999999999999 8899998874
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=84.26 E-value=0.53 Score=37.14 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.+++++|.| .|++|-.++..|.+. |.+|+++.|.+
T Consensus 24 ~p~~~viiG-~G~iglE~A~~~~~~--G~~Vtvi~~~~ 58 (123)
T d1dxla2 24 IPKKLVVIG-AGYIGLEMGSVWGRI--GSEVTVVEFAS 58 (123)
T ss_dssp CCSEEEESC-CSHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred cCCeEEEEc-cchHHHHHHHHHHhc--CCeEEEEEEcc
Confidence 357999999 699999999999999 89999999965
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=84.03 E-value=0.5 Score=36.76 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=27.1
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
.+++|.| .|++|-.++..|.+.|.+|+.+.
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve 51 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVE 51 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcccceEEEe
Confidence 4889998 89999999999999999998764
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=84.00 E-value=5.9 Score=35.00 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=61.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCc-cccccc--CCCC----------------CCCCCceEEEec
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDY-CSSLKN--LHPS----------------RASPNFKFLKGD 71 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-~~~~~~--l~~~----------------~~~~~~~~~~~D 71 (684)
..+|+|.| .|-+|++++..|... |. +++++|...- .+.+.+ +... ...+.+++...+
T Consensus 30 ~~~VliiG-~GglGs~va~~La~~--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~ 106 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLASA--GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 106 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHH--TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHc--CCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence 46899999 788999999999999 55 6777764210 011111 1110 012344444443
Q ss_pred CC-CHHHHHHhhccCCCCEEEEcCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcccccC
Q 035631 72 IT-CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGE 144 (684)
Q Consensus 72 l~-d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~vyg~ 144 (684)
.. +.......+ ...|+||.+... ...-..+-++|.+.+ +.+|+.+....+|.
T Consensus 107 ~~~~~~~~~~~~--~~~divid~~d~-----------------~~~~~~in~~~~~~~--ip~i~g~~~~~~g~ 159 (247)
T d1jw9b_ 107 ALLDDAELAALI--AEHDLVLDCTDN-----------------VAVRNQLNAGCFAAK--VPLVSGAAIRMEGQ 159 (247)
T ss_dssp SCCCHHHHHHHH--HTSSEEEECCSS-----------------HHHHHHHHHHHHHHT--CCEEEEEEEBTEEE
T ss_pred hhhhhccccccc--cccceeeeccch-----------------hhhhhhHHHHHHHhC--CCcccccccccccc
Confidence 32 233344444 578888865421 222335566777776 56887766555543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=83.96 E-value=0.48 Score=36.94 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=27.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.||+|.| .|++|-.++..|.+.|.+|+.+..
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~ 52 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEM 52 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEee
Confidence 4899999 899999999999999999977653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=83.77 E-value=2.5 Score=32.29 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=29.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE 406 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~ 406 (684)
.+|||.| .|-+|..-++.|++.|.+|+++..+.+
T Consensus 13 k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 13 RDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 4899999 789999999999999999988765554
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.67 E-value=0.52 Score=39.75 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=51.8
Q ss_pred cCCceEEEEEcCCcchhHHHHHHHHhcCC--eEeeee---c------cCCChhHHHHHHHhcCCCeEEEcceecCCCCcc
Q 035631 368 GRSRLKFLIYGKTGWIGGLLGKYCKDKGI--AFEFGT---G------RLEDKNSLLDDMKRVRPTHVLNAAGITGRPNVD 436 (684)
Q Consensus 368 ~~~~m~ilItG~~G~iG~~l~~~L~~~g~--~v~~~~---~------d~~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 436 (684)
+..+|+|.|.| +|.+|+..++.|.+... .+.... . +-....+++++++..++|+|+-+..... +.+
T Consensus 4 ~~~k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~iD~V~I~tp~~~--H~~ 80 (172)
T d1lc0a1 4 NSGKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVRQISLEDALRSQEIDVAYICSESSS--HED 80 (172)
T ss_dssp CCCSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEEBCCHHHHHHCSSEEEEEECSCGGG--HHH
T ss_pred CCCCcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHhhccCcCCHHHHHhCCCcchhhhcccccc--ccc
Confidence 44568999999 69999998888775432 111110 0 0111224677888777888875543210 000
Q ss_pred ccc----cch----hhHhhhchhhhHHHHHHHHHcCCe
Q 035631 437 WCE----SHR----VETIRTNVMGTLTLADVCKEKNVL 466 (684)
Q Consensus 437 ~~~----~~~----~~~~~~nv~~~~~ll~~~~~~~~~ 466 (684)
... ... +.-...|+.-...+++.+++.+..
T Consensus 81 ~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~ 118 (172)
T d1lc0a1 81 YIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (172)
T ss_dssp HHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence 000 000 000124666677778877777654
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.63 E-value=0.36 Score=42.11 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.1
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEc
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALD 45 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~ 45 (684)
|||++.| ++..|..+++.|++. +++|+++.
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~--~~~i~~V~ 30 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKE--GHEVVGVF 30 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHC--CCcEEEEE
Confidence 6899998 788999999999998 78888664
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=83.62 E-value=0.56 Score=37.61 Aligned_cols=31 Identities=13% Similarity=0.245 Sum_probs=28.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+|+|.| +|++|-.++..|.+.|.+|+++..
T Consensus 36 k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~ 66 (133)
T d1q1ra2 36 NRLVVIG-GGYIGLEVAATAIKANMHVTLLDT 66 (133)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEC-CchHHHHHHHHHHhhCcceeeeee
Confidence 4899999 899999999999999999988764
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=83.62 E-value=0.62 Score=43.74 Aligned_cols=34 Identities=38% Similarity=0.644 Sum_probs=31.0
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
+|||+|.| +|+-|-..+..|.++ |++|.++.++.
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~--G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEK--GHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 48999999 699999999999998 89999999865
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=83.59 E-value=0.5 Score=37.22 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=27.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+++|.| .|++|-.++..|.+.|.+|+.+..
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~ 63 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHR 63 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEec
Confidence 4789988 899999999999999999987653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=83.54 E-value=0.71 Score=38.77 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=40.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHh--------------cCCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKR--------------VRPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~--------------~~~d~Vih~a~~ 429 (684)
++|||.| +|-.++.++-.|.+.|.++.++.++....+.+.+.+.. .+.|.||++...
T Consensus 19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~ 89 (170)
T d1nyta1 19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSS 89 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSC
T ss_pred CEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeeccccc
Confidence 5899999 57779999999999998887776665444444443321 246888888653
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=83.49 E-value=0.38 Score=39.68 Aligned_cols=43 Identities=9% Similarity=0.069 Sum_probs=30.9
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC-CeEeeeeccCCChhHHHHHHHhc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG-IAFEFGTGRLEDKNSLLDDMKRV 418 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g-~~v~~~~~d~~d~~~~~~~~~~~ 418 (684)
|||.++| +|-+|+++++.|++.| +++... |.. .+..+.+.+..
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~--~r~-~~~~~~l~~~~ 44 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIA--NRG-AEKRERLEKEL 44 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEE--CSS-HHHHHHHHHHT
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEE--eCC-hhHHHHhhhhc
Confidence 7999998 6999999999999888 666544 333 34445444443
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.47 E-value=0.54 Score=37.07 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=27.6
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+|+|.| .||+|-.++..|.+.|.+|+.+..
T Consensus 31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~ 61 (123)
T d1nhpa2 31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDI 61 (123)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC-ChHHHHHHHHHhhccceEEEEEEe
Confidence 3889998 899999999999999999988754
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=83.37 E-value=0.21 Score=42.35 Aligned_cols=118 Identities=13% Similarity=0.014 Sum_probs=63.1
Q ss_pred CCEEEEEcCCchhHHH--HHHHHHhcC--CCcEEEEEcCCCccccccc--CCC--CCCCCCceEEEecCCCHHHHHHhhc
Q 035631 12 PKKILITGAAGFIGSH--VTNRLIKNY--PDYEIVALDKLDYCSSLKN--LHP--SRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 12 ~~~VlItGatG~iG~~--l~~~L~~~~--~g~~V~~~~r~~~~~~~~~--l~~--~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.|||.|.|| |.+|.. ++..|+... .+.+++.+|.++...+... +.. .......++... .| ..+++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL- 74 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI- 74 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH-
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc-
Confidence 479999996 888865 344454331 2459999999742111000 000 001122333222 12 33455
Q ss_pred cCCCCEEEEcCccCCcCCCCCChH------------------------HHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 84 SEGIDTIMHFAAQTHVDNSFGNSF------------------------EFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 84 ~~~~d~Vih~a~~~~~~~~~~~~~------------------------~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
.++|+|+..++.........+.. ....-|+.-.+.+++..++..+-..+|.+|
T Consensus 75 -~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T 151 (171)
T d1obba1 75 -IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA 151 (171)
T ss_dssp -TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence 79999999887543110000000 001347777888888888877556666655
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=83.33 E-value=2.1 Score=35.47 Aligned_cols=27 Identities=26% Similarity=0.192 Sum_probs=23.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEe
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFE 399 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~ 399 (684)
-+|+|+| +|-+|...+..+...|.+|.
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi 54 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYGAFVV 54 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEc-ccccchhhHhhHhhhccccc
Confidence 3899997 78999999999999998773
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=83.14 E-value=0.5 Score=40.09 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=26.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEF 400 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~ 400 (684)
.+|||+||+|-+|..+++.++..|.+|..
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~ 58 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLIG 58 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEee
Confidence 38999999999999999999999998733
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=83.13 E-value=1.1 Score=34.95 Aligned_cols=35 Identities=9% Similarity=0.075 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..++|+|.| +|++|-.++..|.+. +.+|..+.|.+
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~--g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNAT--GRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhc--chhheEeeccc
Confidence 357999999 699999999999999 89999999864
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.98 E-value=0.54 Score=40.29 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=24.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAF 398 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v 398 (684)
-+|||+||+|-||...++.+...|..+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~ 58 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSR 58 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcc
Confidence 379999999999999999999899865
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=82.93 E-value=0.41 Score=41.44 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=25.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
|||.|.| .||+|..++..| ++|++|..+..|
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din 31 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL 31 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence 7999997 899999998766 579999765443
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=82.87 E-value=2.7 Score=35.11 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=27.1
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeecc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGR 404 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d 404 (684)
.|.|+| .|..|..+++.|+++||+|..+..+
T Consensus 4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~ 34 (176)
T d2pgda2 4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRT 34 (176)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCC
Confidence 689999 7999999999999999999766543
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=82.74 E-value=2.6 Score=35.43 Aligned_cols=57 Identities=14% Similarity=-0.011 Sum_probs=34.3
Q ss_pred CceEEEEEcCCcchhHH-HHHHHHhcCCeEeee-eccC---------------CChhHHHHHHHhcCCCeEEEcc
Q 035631 370 SRLKFLIYGKTGWIGGL-LGKYCKDKGIAFEFG-TGRL---------------EDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 370 ~~m~ilItG~~G~iG~~-l~~~L~~~g~~v~~~-~~d~---------------~d~~~~~~~~~~~~~d~Vih~a 427 (684)
.++||.|.| +|.+|+. .+..+.+.+..++++ .+|. .-.++++++++.-++|+|+-+.
T Consensus 2 kkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~t 75 (181)
T d1zh8a1 2 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTL 75 (181)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECC
T ss_pred CCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeeccc
Confidence 457999999 7999986 467777655433221 1222 1234456667666678777543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=82.72 E-value=1.3 Score=34.80 Aligned_cols=95 Identities=14% Similarity=0.101 Sum_probs=56.8
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEEE
Q 035631 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMH 92 (684)
Q Consensus 13 ~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (684)
.+|+|.| +|.+|+.|++.+... .+++++++--..+. +. ...-.++.++.. +.+.+... ..++..+-
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~-~~~~iv~fiDdd~~-----k~-G~~I~Gi~V~~~-----~~l~~~~~-~~i~iai~ 69 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFG-ESFELRGFFDVDPE-----KV-GRPVRGGVIEHV-----DLLPQRVP-GRIEIALL 69 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCC-SSEEEEEEEESCTT-----TT-TCEETTEEEEEG-----GGHHHHST-TTCCEEEE
T ss_pred ceEEEEc-CCHHHHHHHHhHhhc-CCcEEEEEEeCchH-----hc-CCEECCEEEecH-----HHHHHHHh-hcccEEEE
Confidence 4899999 699999999987544 37898888653211 00 111134555432 33444443 45666554
Q ss_pred cCccCCcCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCcc
Q 035631 93 FAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDE 140 (684)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~SS~~ 140 (684)
+... ...+.+++.|.+.| ++.+..++...
T Consensus 70 ~i~~------------------~~~~~I~d~l~~~g-Ik~I~~f~~~~ 98 (126)
T d2dt5a2 70 TVPR------------------EAAQKAADLLVAAG-IKGILNFAPVV 98 (126)
T ss_dssp CSCH------------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred eCCH------------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence 4321 12356777888877 88777766533
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=82.67 E-value=2.1 Score=35.01 Aligned_cols=25 Identities=16% Similarity=0.119 Sum_probs=23.0
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAF 398 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v 398 (684)
||.++| .|..|..+++.|++.|+.+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~ 26 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL 26 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE
Confidence 688999 6999999999999999876
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=82.56 E-value=0.33 Score=40.33 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=54.6
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEEE
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIM 91 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (684)
.-+|+|.| .|-.|..-++..... |-+|.++|.+. ..++.+... ....++.. ..+.+.+.+.+ .++|+||
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~l--GA~V~~~D~~~--~~l~~l~~~-~~~~~~~~---~~~~~~l~~~~--~~aDivI 100 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGL--GAQVQIFDINV--ERLSYLETL-FGSRVELL---YSNSAEIETAV--AEADLLI 100 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHHH-HGGGSEEE---ECCHHHHHHHH--HTCSEEE
T ss_pred CcEEEEEC-CChHHHHHHHHHhhC--CCEEEEEeCcH--HHHHHHHHh-hcccceee---hhhhhhHHHhh--ccCcEEE
Confidence 46999999 699999999999999 89999999864 233322211 11223333 45577777877 7899999
Q ss_pred EcCccCC
Q 035631 92 HFAAQTH 98 (684)
Q Consensus 92 h~a~~~~ 98 (684)
-++-...
T Consensus 101 ~aalipG 107 (168)
T d1pjca1 101 GAVLVPG 107 (168)
T ss_dssp ECCCCTT
T ss_pred EeeecCC
Confidence 9887654
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=82.27 E-value=1.1 Score=37.82 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=21.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcC
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKG 395 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g 395 (684)
.||.|-| .|-||+.+++.|.+++
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~ 24 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQP 24 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCC
Confidence 4999999 8999999999999875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=82.13 E-value=1.2 Score=37.36 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCc-EEEEEcCCCcccccccCCCCCCCCCceEEEecCC--CHHHHHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT--CADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~--d~~~~~~~~~~~~~ 87 (684)
.+.+|+|+| .|-||...++.+... |. +|++.++++.. +...+.. .-..++...-. ............++
T Consensus 28 ~G~~VlV~G-~G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r--~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~ 99 (174)
T d1e3ia2 28 PGSTCAVFG-LGCVGLSAIIGCKIA--GASRIIAIDINGEK--FPKAKAL---GATDCLNPRELDKPVQDVITELTAGGV 99 (174)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCSEEEEECSCGGG--HHHHHHT---TCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCEEEEEC-CChHHHHHHHHHHHh--CCceeeeeccchHH--HHHHHHh---CCCcccCCccchhhhhhhHhhhhcCCC
Confidence 457899998 599999999999988 54 78888886421 1111111 11122222111 23334444555799
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|+||.++|.
T Consensus 100 d~vie~~G~ 108 (174)
T d1e3ia2 100 DYSLDCAGT 108 (174)
T ss_dssp SEEEESSCC
T ss_pred cEEEEeccc
Confidence 999999984
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.03 E-value=1.5 Score=36.33 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
.+.+|+|.|+ |-+|...++.+... |.+|+++++++
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~--G~~Vi~~~~~~ 61 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAM--GLHVAAIDIDD 61 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHc--CCccceecchh
Confidence 3478999986 99999999888777 78999999864
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.97 E-value=1.5 Score=36.49 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=43.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcceec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGIT 430 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a~~~ 430 (684)
++|.|.|.+..+|+.|+..|+++|..|.....+-.+ +.+...+. |+||.++|..
T Consensus 40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---l~~~~~~a--Divi~a~G~~ 93 (170)
T d1a4ia1 40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---LDEEVNKG--DILVVATGQP 93 (170)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---HHHHHTTC--SEEEECCCCT
T ss_pred ceEEEEecCCccchHHHHHHHhccCceEEEeccccc---HHHHHhhc--cchhhccccc
Confidence 489999999999999999999999999776544333 34556666 9999999844
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=81.95 E-value=0.42 Score=44.42 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=28.5
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
|+|+|+| +|..|-..+.+|.++|++|.++..
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~ 31 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLES 31 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEec
Confidence 7999999 599999999999999999988764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.92 E-value=2.9 Score=34.71 Aligned_cols=25 Identities=32% Similarity=0.340 Sum_probs=22.2
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCC-eE
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGI-AF 398 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~-~v 398 (684)
+|+|+|+ |-+|...+..+...|. +|
T Consensus 29 ~VlI~G~-G~iG~~~~~~a~~~G~~~V 54 (171)
T d1pl8a2 29 KVLVCGA-GPIGMVTLLVAKAMGAAQV 54 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred EEEEECC-CccHHHHHHHHHHcCCceE
Confidence 8999985 9999999999999998 45
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=81.83 E-value=1.3 Score=37.27 Aligned_cols=78 Identities=10% Similarity=-0.028 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEEecCCC--HHHHHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLKGDITC--ADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~~Dl~d--~~~~~~~~~~~~~ 87 (684)
...+|+|.|+ |-+|...++.+...+ ..+|+++++++.. ++..... +. .++...-.| .+.........++
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G-~~~Vi~~d~~~~k--l~~a~~l----Ga~~~i~~~~~d~~~~~~~~~~~~~G~ 98 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAG-ASRIIGVGTHKDK--FPKAIEL----GATECLNPKDYDKPIYEVICEKTNGGV 98 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSCGGG--HHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcC-CceeeccCChHHH--HHHHHHc----CCcEEEcCCCchhHHHHHHHHhcCCCC
Confidence 4578999985 999999999998883 2589999986532 1111111 22 222211112 2334344444689
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|+||.+++.
T Consensus 99 d~vid~~g~ 107 (174)
T d1p0fa2 99 DYAVECAGR 107 (174)
T ss_dssp SEEEECSCC
T ss_pred cEEEEcCCC
Confidence 999998874
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=81.76 E-value=0.87 Score=43.06 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY 49 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~ 49 (684)
.+|||+|.| +|.-|-..+..|++++.+++|+++.|+..
T Consensus 3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 458999999 69999999999998865689999999754
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=81.75 E-value=1 Score=37.63 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=37.9
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
+|||+||+|-+|...++.....|.+|....++-...+.+. ....|.+++..
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~----~lGad~vi~~~ 76 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QLGASEVISRE 76 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HHTCSEEEEHH
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH----hhcccceEecc
Confidence 6999999999999999999999999966655544434333 33347777643
|
| >d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.68 E-value=0.81 Score=36.51 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=37.4
Q ss_pred CCceEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEE
Q 035631 369 RSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLN 425 (684)
Q Consensus 369 ~~~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih 425 (684)
+.+|||||+.. +-....+.|.++|+.+.....+-.+.+.+.+.+.++ |+++-
T Consensus 2 k~kmKILv~d~---i~~~a~~~L~~~g~~~v~~~~~~~~~~~l~~~~~~~--d~ii~ 53 (132)
T d1sc6a2 2 KDKIKFLLVEG---VHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDA--HFIGL 53 (132)
T ss_dssp CSSCCEEECSC---CCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSC--SEEEE
T ss_pred CCCCEEEEECC---CCHHHHHHHHhCCCEEEEeCCCCCCHHHHHHhhcCC--cEEEE
Confidence 35689999983 566777899999987544444444677787888877 87753
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.51 E-value=0.66 Score=36.64 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=28.0
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
.+++|.| .|++|-.++..|.+.|.+|+++..
T Consensus 23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~ 53 (125)
T d3grsa2 23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIR 53 (125)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEc-CCccHHHHHHHHhcCCcEEEEEee
Confidence 4899999 799999999999999999987764
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=81.48 E-value=1.6 Score=36.46 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=28.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCC
Q 035631 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL 47 (684)
Q Consensus 12 ~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 47 (684)
|++|.|-| .|-||+.+++.|.+++ ..+|+++...
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~-di~vvaInd~ 34 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQD-DMKVIGVSKT 34 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSS-SEEEEEEEES
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCC-CceEEEEecC
Confidence 46899998 8999999999998774 6788887653
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=81.47 E-value=2.2 Score=36.85 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCccccccc--CCC-----CCCCCCceEEEecCCCHHHHHHhhc
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKN--LHP-----SRASPNFKFLKGDITCADLMNYLLV 83 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--l~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~ 83 (684)
.+|||+++| ++..+..+++.|++. +++|.++.-.+....... +.. .....++........+.+...+.+.
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVA 78 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHH
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhC--CCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHh
Confidence 357899998 688999999999998 788766543211111000 000 0011345566666556666667777
Q ss_pred cCCCCEEEEcCcc
Q 035631 84 SEGIDTIMHFAAQ 96 (684)
Q Consensus 84 ~~~~d~Vih~a~~ 96 (684)
..++|+++-+.+.
T Consensus 79 ~~~~d~~v~~~~~ 91 (206)
T d1fmta2 79 ELQADVMVVVAYG 91 (206)
T ss_dssp HTTCSEEEEESCC
T ss_pred hhcceEEEeeccc
Confidence 7899998866654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=81.29 E-value=0.51 Score=39.99 Aligned_cols=78 Identities=10% Similarity=0.063 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCc-eEEE-ecCCC-HHHHHHhhccCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF-KFLK-GDITC-ADLMNYLLVSEGI 87 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~-~~~~-~Dl~d-~~~~~~~~~~~~~ 87 (684)
.+.+|+|+|+ |-+|...++.+...+ ..+|+++++++. +++..... +. .++. -|-.+ ...+.+.....++
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G-~~~Vi~vd~~~~--kl~~Ak~~----GA~~~in~~~~~~~~~~~~~~~~g~G~ 100 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAG-ASRIIGIDLNKD--KFEKAMAV----GATECISPKDSTKPISEVLSEMTGNNV 100 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGG--GHHHHHHH----TCSEEECGGGCSSCHHHHHHHHHTSCC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcC-CceEEEecCcHH--HHHHHHhc----CCcEEECccccchHHHHHHHHhccccc
Confidence 3568999985 999999999998883 269999998753 21111111 11 1221 12222 3334454555789
Q ss_pred CEEEEcCcc
Q 035631 88 DTIMHFAAQ 96 (684)
Q Consensus 88 d~Vih~a~~ 96 (684)
|++|.+.+.
T Consensus 101 d~vi~~~g~ 109 (176)
T d1d1ta2 101 GYTFEVIGH 109 (176)
T ss_dssp CEEEECSCC
T ss_pred eEEEEeCCc
Confidence 999998874
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=80.97 E-value=1.5 Score=35.23 Aligned_cols=76 Identities=17% Similarity=0.057 Sum_probs=50.5
Q ss_pred eEEEEEcCC---cchhHHHHHHHHhcCCeEeeeeccCC------ChhHHHHHHHhcCCCeEEEcceecCCCCccccccch
Q 035631 372 LKFLIYGKT---GWIGGLLGKYCKDKGIAFEFGTGRLE------DKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCESHR 442 (684)
Q Consensus 372 m~ilItG~~---G~iG~~l~~~L~~~g~~v~~~~~d~~------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 442 (684)
.+|.|.|++ +-.|..+++.|++.||+|..+.-... -..++.++- ..+|.|+-+...
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp--~~iD~v~i~vp~------------- 84 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIP--DKIEVVDLFVKP------------- 84 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCS--SCCSEEEECSCH-------------
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccC--ccceEEEEEeCH-------------
Confidence 489999998 88999999999999998854443211 122222211 235776555431
Q ss_pred hhHhhhchhhhHHHHHHHHHcCCeEEEE
Q 035631 443 VETIRTNVMGTLTLADVCKEKNVLLMNF 470 (684)
Q Consensus 443 ~~~~~~nv~~~~~ll~~~~~~~~~~i~~ 470 (684)
..+..+++.|.+.+++.+.+
T Consensus 85 --------~~~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 85 --------KLTMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp --------HHHHHHHHHHHHHTCSEEEE
T ss_pred --------HHHHHHHHHHHHhCCCEEEE
Confidence 23566889999999986665
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=80.95 E-value=1.2 Score=38.27 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..+++|.|.| .|-||+.+++.|..- |.+|++.++..
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 78 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGF--GAKVIAYDPYP 78 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred ccceeeeeee-ccccccccccccccc--ceeeeccCCcc
Confidence 3468999999 899999999999877 89999999853
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=80.88 E-value=1.2 Score=38.34 Aligned_cols=55 Identities=18% Similarity=-0.020 Sum_probs=42.4
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCeEeeeeccC--------CChhHHHHHHHhcCCCeEEEccee
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRL--------EDKNSLLDDMKRVRPTHVLNAAGI 429 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~--------~d~~~~~~~~~~~~~d~Vih~a~~ 429 (684)
++|.|.| .|-||+.+++.|..-|.+|.++.... ...+++++++..+ |+|+.++..
T Consensus 44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~s--Dii~~~~pl 106 (197)
T d1j4aa1 44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQA--DVISLHVPD 106 (197)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHC--SEEEECSCC
T ss_pred CeEEEec-ccccchhHHHhHhhhcccccccCcccccccccceeeecccccccccc--ccccccCCc
Confidence 4899999 99999999999999999886543222 2335688889888 987766553
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=80.78 E-value=2.6 Score=38.31 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r 46 (684)
..+++|+|-| .|-+|+++++.|.+. |.+|++++-
T Consensus 34 L~gktvaIqG-fGnVG~~~A~~L~e~--Gakvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQG-FGNVGLHSMRYLHRF--GAKCVAVGE 67 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEc
Confidence 3568999999 799999999999999 899998864
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=80.76 E-value=1.6 Score=37.72 Aligned_cols=57 Identities=9% Similarity=-0.123 Sum_probs=40.4
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeee-------------------------------ccCCChhHHHHHHHhcC
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGT-------------------------------GRLEDKNSLLDDMKRVR 419 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~-------------------------------~d~~d~~~~~~~~~~~~ 419 (684)
+|||+++| ++..+..+.+.|++.|+++..+. ....+.+...+.++..+
T Consensus 3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (206)
T d1fmta2 3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQ 81 (206)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhc
Confidence 57999998 57788888999999999863322 11223455566777778
Q ss_pred CCeEEEcce
Q 035631 420 PTHVLNAAG 428 (684)
Q Consensus 420 ~d~Vih~a~ 428 (684)
+|+++-+.+
T Consensus 82 ~d~~v~~~~ 90 (206)
T d1fmta2 82 ADVMVVVAY 90 (206)
T ss_dssp CSEEEEESC
T ss_pred ceEEEeecc
Confidence 898776665
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=80.69 E-value=1 Score=40.60 Aligned_cols=35 Identities=11% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 11 ~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..+||+|.| .|.-|..++..|.++ |++|+++.|++
T Consensus 3 ~~~kV~IiG-aG~aGl~~A~~L~~~--G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVG-GSISGLTAALMLRDA--GVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCCcEEEEC-cCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 447999999 599999999999999 89999999864
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=80.63 E-value=1 Score=35.63 Aligned_cols=80 Identities=14% Similarity=-0.056 Sum_probs=50.8
Q ss_pred ceEEEEEcCC---cchhHHHHHHHHhcC-CeEeeeeccC------CChhHHHHHHHhcCCCeEEEcceecCCCCcccccc
Q 035631 371 RLKFLIYGKT---GWIGGLLGKYCKDKG-IAFEFGTGRL------EDKNSLLDDMKRVRPTHVLNAAGITGRPNVDWCES 440 (684)
Q Consensus 371 ~m~ilItG~~---G~iG~~l~~~L~~~g-~~v~~~~~d~------~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 440 (684)
..+|.|.|+| |-.|..+.+.|++.| ++|..+.-.. ....++.++- ..+|.++-+...
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp--~~vDlvvi~vp~----------- 74 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIP--DEIDLAIIVVPK----------- 74 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCS--SCCSEEEECSCH-----------
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcC--CCCceEEEecCh-----------
Confidence 3489999998 999999999998766 4663333221 1122222221 245877665441
Q ss_pred chhhHhhhchhhhHHHHHHHHHcCCe-EEEEecc
Q 035631 441 HRVETIRTNVMGTLTLADVCKEKNVL-LMNFATG 473 (684)
Q Consensus 441 ~~~~~~~~nv~~~~~ll~~~~~~~~~-~i~~SS~ 473 (684)
..+..+++.|.+.+++ .+.+|+.
T Consensus 75 ----------~~~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 75 ----------RFVKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp ----------HHHHHHHHHHHHHTCCEEEECCCS
T ss_pred ----------HHhHHHHHHHHHcCCCEEEEeccc
Confidence 1255689999999998 6666654
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=80.59 E-value=1.6 Score=37.19 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCEEEEE-cCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCCEE
Q 035631 12 PKKILIT-GAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTI 90 (684)
Q Consensus 12 ~~~VlIt-GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (684)
+.+|+|. ||+|-+|...++..... |.+|+++.|+. ...+...+.+...++|.|
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~------------------------~~~~~~~~~~~~lGad~v 82 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDR------------------------PNLDEVVASLKELGATQV 82 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCC------------------------TTHHHHHHHHHHHTCSEE
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecc------------------------cccchHHhhhhhccccEE
Q ss_pred EE
Q 035631 91 MH 92 (684)
Q Consensus 91 ih 92 (684)
|+
T Consensus 83 i~ 84 (189)
T d1gu7a2 83 IT 84 (189)
T ss_dssp EE
T ss_pred Ee
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=80.59 E-value=0.61 Score=43.79 Aligned_cols=32 Identities=28% Similarity=0.500 Sum_probs=28.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhcCCeEeeeec
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTG 403 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~ 403 (684)
++||+|+| +|+-|-..+..|.++|++|.++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk 33 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQ 33 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEEC
Confidence 35999999 899999999999999999977653
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.55 E-value=1.4 Score=36.83 Aligned_cols=119 Identities=12% Similarity=0.013 Sum_probs=63.3
Q ss_pred CCEEEEEcC-CchhHHHHHHHHHhcC--CCcEEEEEcCCCcccccccCCCC------CCCCCceEEEecCCCHHHHHHhh
Q 035631 12 PKKILITGA-AGFIGSHVTNRLIKNY--PDYEIVALDKLDYCSSLKNLHPS------RASPNFKFLKGDITCADLMNYLL 82 (684)
Q Consensus 12 ~~~VlItGa-tG~iG~~l~~~L~~~~--~g~~V~~~~r~~~~~~~~~l~~~------~~~~~~~~~~~Dl~d~~~~~~~~ 82 (684)
+|||.|.|| +.+.+..++..+.... +.-++..+|.++...+.+.+... ......... ...|. .+.+
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~---~~al 75 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDR---RRAL 75 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCH---HHHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCc---hhhc
Confidence 478999996 3344455554444331 12489999986533222221110 011122222 22232 2344
Q ss_pred ccCCCCEEEEcCccCCcCC---------------CC-CCh--HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 035631 83 VSEGIDTIMHFAAQTHVDN---------------SF-GNS--FEFTNNNIYGTHVLLEACKLTGQVKRFIHVS 137 (684)
Q Consensus 83 ~~~~~d~Vih~a~~~~~~~---------------~~-~~~--~~~~~~n~~~~~~ll~~~~~~~~~~~~i~~S 137 (684)
.++|+||..|+....+. .. ..+ ......|+...+.+++...+..+-..++.+|
T Consensus 76 --~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt 146 (169)
T d1s6ya1 76 --DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT 146 (169)
T ss_dssp --TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred --CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 79999999998643110 00 001 1123568888888998888887556666554
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=80.43 E-value=1.6 Score=36.93 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=24.3
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCCe-Eeeeecc
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGIA-FEFGTGR 404 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~~-v~~~~~d 404 (684)
.+|+|+|+ |-.|+.++..|.+.|.. +..+..+
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~ 51 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRR 51 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccc
Confidence 48999995 77889999999999873 4344433
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=80.42 E-value=0.62 Score=40.08 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCC
Q 035631 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD 48 (684)
Q Consensus 10 ~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 48 (684)
..+++|.|.| .|-||+.+++.|..- |.+|++.++..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 82 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAF--GFNVLFYDPYL 82 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTS
T ss_pred eeCceEEEec-cccccccceeeeecc--ccceeeccCcc
Confidence 4568999998 899999999999877 89999999854
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.38 E-value=2 Score=36.33 Aligned_cols=54 Identities=6% Similarity=-0.058 Sum_probs=36.2
Q ss_pred ceEEEEEcCCcchhHHHHHHHHhc-CCeEeeeeccCC------------------ChhHHHHHHHhcCCCeEEEc
Q 035631 371 RLKFLIYGKTGWIGGLLGKYCKDK-GIAFEFGTGRLE------------------DKNSLLDDMKRVRPTHVLNA 426 (684)
Q Consensus 371 ~m~ilItG~~G~iG~~l~~~L~~~-g~~v~~~~~d~~------------------d~~~~~~~~~~~~~d~Vih~ 426 (684)
+|||.|.| +|.+|+..++.|... +.++..+ .|.. -.++++++++..++|+|+-+
T Consensus 1 kiki~iIG-~G~~g~~~~~~l~~~~~~~i~ai-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~ 73 (184)
T d1ydwa1 1 QIRIGVMG-CADIARKVSRAIHLAPNATISGV-ASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVP 73 (184)
T ss_dssp CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEE-ECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEEC
T ss_pred CeEEEEEc-CCHHHHHHHHHHHhCCCCEEEEE-EeCCccccccchhccccccceeecCcHHHhhhccccceeeec
Confidence 47999999 689999999998776 3444221 2321 13456677776678888744
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=80.32 E-value=3.3 Score=36.25 Aligned_cols=74 Identities=11% Similarity=0.103 Sum_probs=48.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCCcEEEEEcCCCcccccccCCCCCCCCCceEEEecCCCHHHHHHhhccCCCC
Q 035631 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGID 88 (684)
Q Consensus 9 ~~~~~~VlItGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (684)
...+++|+|-| -|-+|+++++.|.+. |.+|++.+.+.. ....+.. ..+.+. .+.+ + +...++|
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~--Gakvv~~d~~~~--~~~~~~~---~~g~~~-----~~~~---~-~~~~~cD 98 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTE--GAKLVVTDVNKA--AVSAAVA---EEGADA-----VAPN---A-IYGVTCD 98 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHH---HHCCEE-----CCGG---G-TTTCCCS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEeecccHH--HHHHHHH---hcCCcc-----cCCc---c-ccccccc
Confidence 34678999999 899999999999999 899998876421 1111100 011111 1222 2 2347999
Q ss_pred EEEEcCccCCc
Q 035631 89 TIMHFAAQTHV 99 (684)
Q Consensus 89 ~Vih~a~~~~~ 99 (684)
+++-||.....
T Consensus 99 Il~PcA~~~~I 109 (230)
T d1leha1 99 IFAPCALGAVL 109 (230)
T ss_dssp EEEECSCSCCB
T ss_pred Eeccccccccc
Confidence 99999986544
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.21 E-value=0.97 Score=38.11 Aligned_cols=30 Identities=30% Similarity=0.419 Sum_probs=26.7
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeee
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGT 402 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~ 402 (684)
+|||+||+|-+|...++.....|.+|....
T Consensus 34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~ 63 (176)
T d1xa0a2 34 PVLVTGATGGVGSLAVSMLAKRGYTVEAST 63 (176)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeccchHHHHHHHHHHHcCCceEEec
Confidence 799999999999999999999999884443
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=80.20 E-value=0.97 Score=37.79 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=23.7
Q ss_pred eEEEEEcCCcchhHHHHHHHHhcCC-eE
Q 035631 372 LKFLIYGKTGWIGGLLGKYCKDKGI-AF 398 (684)
Q Consensus 372 m~ilItG~~G~iG~~l~~~L~~~g~-~v 398 (684)
-+|+|+|++|-+|...+..+...|. .|
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V 56 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSGATI 56 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEEeccccceeeeeecccccccccc
Confidence 3899999999999999999998885 44
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=80.02 E-value=0.94 Score=38.26 Aligned_cols=51 Identities=18% Similarity=0.260 Sum_probs=37.3
Q ss_pred EEEEEcCCcchhHHHHHHHHhcCCeEeeeeccCCChhHHHHHHHhcCCCeEEEcc
Q 035631 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAA 427 (684)
Q Consensus 373 ~ilItG~~G~iG~~l~~~L~~~g~~v~~~~~d~~d~~~~~~~~~~~~~d~Vih~a 427 (684)
+|||+||+|-+|...++.....|.+|......-...+. ++....|.+|+.-
T Consensus 34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~----~~~lGad~vi~~~ 84 (177)
T d1o89a2 34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY----LKSLGASRVLPRD 84 (177)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH----HHHHTEEEEEEGG
T ss_pred cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH----HHhhccccccccc
Confidence 79999999999999999999999998655543333222 2333348888754
|