Citrus Sinensis ID: 035660

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELLDD
cHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEccccccEEEccEEEEccccccccccccccEEEcccccccHHHHHHccccEEEEccccccccccEEEEcccccccccccccccccccccEEEEEEEEEccEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccccEEEEEccccEEEEccccEEEEEcccEEEEEEEEcccccccccccEEEEEEEEEEEEEEEEccccEEEEEEcccccccc
ccHHHHHHHHHHHHHHHHHHccHccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEccccccEEEEEEcccccEEEEcccccHHHcccccccccccccccEEcccccHHHHcccccccccccccEEEEEEcccccccEEEEEEEEEEcccccccEEEccEEEEEcccccccEccccccEEEcccccEEEccccccEEEEEEcccccccccccEEEEcccccccccEEEEcccccEEEEEEEEEEEccEEEEccHHHHEcccccccEEEEEcccEEEEccHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEEEcccEEcccHcHEEEEEcccEEEEEEccccccccccccEEEEEEEEEccEEEEEEccccEEEEcccccHcccc
MAVALAVFYSLILVPiavagtptpsrpsRLIIELIHhdsvvspyhdpnenAANRIQRAINISIARFAYLQAKVKSyssnniidyqadvfpskvFSLFFMNftigqppipqftvmdtgstllwvqcrpcldcsqqfgpifdpsmsssyadlpcyseycwyspnvkcnflnqclynqtyirgpsasgvlATEQLIFKtsdegkirVQDVVfgcghdngkfedrhlsgvfglGFSRLSLVSQLGSTFSycvgnlndpyyfhnklvlghgariegdstplevingRYYITLEAISiggkmldidpdiftrktwdnggviidsgSSATWLVKAGYDALLHEVESLLDMWLTRyrfdswtlcyrgtashdligfpavtfhfaGGAELVLDVdslffqrwphsfcmavlpsfvngenytsLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELLDD
MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFktsdegkirVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERvdcelldd
MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELLDD
**VALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCEL***
*AVALAVFYSLILVPIAV***************LIHHDS*********************I*****************************SKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDP*MSSSYADLPCYS**C***********NQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNL*********LVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVES***********DSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELL**
MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELLDD
*AVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKS***********DVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDC*****
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELLDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query448 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 no no 0.875 0.897 0.326 5e-49
Q766C3437 Aspartic proteinase nepen N/A no 0.924 0.947 0.315 3e-47
Q766C2438 Aspartic proteinase nepen N/A no 0.821 0.840 0.315 4e-46
Q3EBM5447 Probable aspartic proteas no no 0.921 0.923 0.310 3e-44
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.857 0.768 0.301 5e-35
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.845 0.806 0.289 4e-28
Q9S9K4475 Aspartic proteinase-like no no 0.738 0.696 0.264 2e-24
Q9LZL3453 Aspartic proteinase PCS1 no no 0.714 0.706 0.287 4e-20
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.781 0.853 0.240 3e-17
Q0IU52410 Aspartic proteinase Asp1 no no 0.783 0.856 0.248 5e-14
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  195 bits (496), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 208/426 (48%), Gaps = 34/426 (7%)

Query: 33  ELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQADVFPSK 92
           +LIH DS  SP+++P E ++ R++ AI+ S+ R  +   K      +N    Q D+  + 
Sbjct: 34  DLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEK------DNTPQPQIDLTSNS 87

Query: 93  VFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPC 152
               + MN +IG PP P   + DTGS LLW QC PC DC  Q  P+FDP  SS+Y D+ C
Sbjct: 88  --GEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKTSSTYKDVSC 145

Query: 153 YSEYCWYSPN-VKCNFL-NQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFG 210
            S  C    N   C+   N C Y+ +Y       G +A + L   +SD   +++++++ G
Sbjct: 146 SSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQLKNIIIG 205

Query: 211 CGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGST----FSYCVGNLNDPYYFHNKLVLGHG 266
           CGH+N    ++  SG+ GLG   +SL+ QLG +    FSYC+  L       +K+  G  
Sbjct: 206 CGHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGTN 265

Query: 267 ARIEGD---STPLEVINGR---YYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGS 320
           A + G    STPL     +   YY+TL++IS+G K +            +   +IIDSG+
Sbjct: 266 AIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSEGN---IIIDSGT 322

Query: 321 SATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAE 380
           + T L    Y  L   V S +D    +      +LCY  T     +  P +T HF  GA+
Sbjct: 323 TLTLLPTEFYSELEDAVASSIDAEKKQDPQSGLSLCYSATGD---LKVPVITMHF-DGAD 378

Query: 381 LVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFER 440
           + LD  + F Q      C A   S        S S+ G +AQ N+ V YD   K ++F+ 
Sbjct: 379 VKLDSSNAFVQVSEDLVCFAFRGS-------PSFSIYGNVAQMNFLVGYDTVSKTVSFKP 431

Query: 441 VDCELL 446
            DC  +
Sbjct: 432 TDCAKM 437
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query448
255585473448 Aspartic proteinase nepenthesin-1 precur 0.984 0.984 0.491 1e-123
224091849438 predicted protein [Populus trichocarpa] 0.904 0.924 0.497 1e-117
296090291408 unnamed protein product [Vitis vinifera] 0.901 0.990 0.482 1e-108
225446261440 PREDICTED: aspartic proteinase nepenthes 0.901 0.918 0.482 1e-108
147786881408 hypothetical protein VITISV_008929 [Viti 0.901 0.990 0.482 1e-108
449516339456 PREDICTED: probable aspartic protease At 0.986 0.969 0.445 1e-104
356498789446 PREDICTED: probable aspartic protease At 0.944 0.948 0.460 1e-102
449457263469 PREDICTED: probable aspartic protease At 0.986 0.942 0.433 1e-102
297825301430 hypothetical protein ARALYDRAFT_481251 [ 0.917 0.955 0.448 1e-101
18400416458 aspartyl protease family protein [Arabid 0.928 0.908 0.440 1e-100
>gi|255585473|ref|XP_002533429.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223526717|gb|EEF28949.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/448 (49%), Positives = 303/448 (67%), Gaps = 7/448 (1%)

Query: 1   MAVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAIN 60
           +++ L +F +L+   I  A     ++P +L+ +LIH  S++SPY +PN + A R +R + 
Sbjct: 8   VSLGLLIFTTLVTGNIVEAYN---AQPKQLVTKLIHWGSILSPYFNPNASVAERAERIVK 64

Query: 61  ISIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTL 120
            S  R AYL A++K     N  D++ ++ PS    LF +NF++GQP  PQ  +MDTGS +
Sbjct: 65  TSATRIAYLYAQIKGDIHMN--DFELNLLPSTYEPLFLVNFSMGQPATPQLAIMDTGSNI 122

Query: 121 LWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRG 180
           LWV+C PC  C+QQ GP+ DPS SS+YA LPC +  C Y+P+  CN LNQC YN +Y  G
Sbjct: 123 LWVRCAPCKRCTQQNGPLLDPSKSSTYASLPCTNTMCHYAPSAYCNRLNQCGYNLSYATG 182

Query: 181 PSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQL 240
            S++GVLATEQLIF +SDEG   V  VVFGC H+NG ++DR  +GVFGLG    S V+++
Sbjct: 183 LSSAGVLATEQLIFHSSDEGVNAVPSVVFGCSHENGDYKDRRFTGVFGLGKGITSFVTRM 242

Query: 241 GSTFSYCVGNLNDPYYFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDID 300
           GS FSYC+GN+ DP+Y +N+LV G  A  EG STPL+V+NG YY+TLE IS+G K LDID
Sbjct: 243 GSKFSYCLGNIADPHYGYNQLVFGEKANFEGYSTPLKVVNGHYYVTLEGISVGEKRLDID 302

Query: 301 PDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGT 360
              F+ K  +    +IDSG++ TWL ++ + AL +EV  LLD  L  +   S+  CY+GT
Sbjct: 303 STAFSMKG-NEKSALIDSGTALTWLAESAFRALDNEVRQLLDGVLMPFWRGSFA-CYKGT 360

Query: 361 ASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMM 420
            S DLIGFP VTFHF+GGA+L LD +S+F+Q  P   C+AV  +   G ++ S S+IG+M
Sbjct: 361 VSQDLIGFPVVTFHFSGGADLDLDTESMFYQATPDILCIAVRQASAYGNDFKSFSVIGLM 420

Query: 421 AQQNYNVAYDIGGKKLAFERVDCELLDD 448
           AQQ YN+AYD+   KL F+R+DC+LL D
Sbjct: 421 AQQYYNMAYDLNSNKLFFQRIDCQLLVD 448

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224091849|ref|XP_002309371.1| predicted protein [Populus trichocarpa] gi|222855347|gb|EEE92894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090291|emb|CBI40110.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446261|ref|XP_002265547.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147786881|emb|CAN62311.1| hypothetical protein VITISV_008929 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449516339|ref|XP_004165204.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356498789|ref|XP_003518231.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|449457263|ref|XP_004146368.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297825301|ref|XP_002880533.1| hypothetical protein ARALYDRAFT_481251 [Arabidopsis lyrata subsp. lyrata] gi|297326372|gb|EFH56792.1| hypothetical protein ARALYDRAFT_481251 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18400416|ref|NP_565559.1| aspartyl protease family protein [Arabidopsis thaliana] gi|20197296|gb|AAM15014.1| predicted protein [Arabidopsis thaliana] gi|330252412|gb|AEC07506.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query448
TAIR|locus:505006268458 AT2G23945 [Arabidopsis thalian 0.966 0.945 0.427 7.6e-96
TAIR|locus:2126495424 AT4G30030 [Arabidopsis thalian 0.834 0.882 0.439 2.7e-77
TAIR|locus:2126505427 AT4G30040 [Arabidopsis thalian 0.915 0.960 0.399 1.2e-72
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.866 0.887 0.339 1.9e-51
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.861 0.895 0.320 2.3e-46
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.939 0.946 0.306 5e-44
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.857 0.832 0.321 5.2e-42
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.732 0.656 0.329 6.1e-39
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.921 0.923 0.297 1.3e-38
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.725 0.672 0.337 1.6e-38
TAIR|locus:505006268 AT2G23945 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 192/449 (42%), Positives = 278/449 (61%)

Query:    11 LILVPIAVAGTPTPSRPSRLIIELIHHDSV--VSPYHDPNENAANRIQRAINISIARFAY 68
             L+ + ++        +P+R+ ++LIH +SV  ++P         + I+   +IS ARF Y
Sbjct:    10 LLFITVSYFVVTESIKPNRMAMKLIHRESVARLNPNARVPITPEDHIKHLTDISSARFKY 69

Query:    69 LQAKV-KSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRP 127
             LQ  + K   S+N   +Q DV  +   SLF +NF++GQPP+PQ T+MDTGS+LLW+QC+P
Sbjct:    70 LQNSIDKELGSSN---FQVDVEQAIKTSLFLVNFSVGQPPVPQLTIMDTGSSLLWIQCQP 126

Query:   128 CLDCSQQ--FGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASG 185
             C  CS      P+F+P++SS++ +  C   +C Y+PN  C   N+C+Y Q YI G  + G
Sbjct:   127 CKHCSSDHMIHPVFNPALSSTFVECSCDDRFCRYAPNGHCGSSNKCVYEQVYISGTGSKG 186

Query:   186 VLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQLGSTFS 245
             VLA E+L F T +   +  Q + FGCG++NG+  + H +G+ GLG    SL  QLGS FS
Sbjct:   187 VLAKERLTFTTPNGNTVVTQPIAFGCGYENGEQLESHFTGILGLGAKPTSLAVQLGSKFS 246

Query:   246 YCVGNLNDPYYFHNKLVLGHGARIEGDSTPLE--VINGRYYITLEAISIGGKMLDIDPDI 303
             YC+G+L +  Y +N+LVLG  A I GD TP+E    N  YY+ LE IS+G   L+I+P +
Sbjct:   247 YCIGDLANKNYGYNQLVLGEDADILGDPTPIEFETENSIYYMNLEGISVGDTQLNIEPVV 306

Query:   304 FTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASH 363
             F R+     GVI+DSG+  TWL    Y  L +E++S+LD  L R+ F  + LCY G  S 
Sbjct:   307 FKRRG-PRTGVILDSGTLYTWLADIAYRELYNEIKSILDPKLERFWFRDF-LCYHGRVSE 364

Query:   364 DLIGFPAVTFHFAGGAELVLDVDSLFFQ-RWPHSF---CMAVLPSFVNGENYTSLSLIGM 419
             +LIGFP VTFHFAGGAEL ++  S+F+    P++F   CM+V P+  +G  Y   + IG+
Sbjct:   365 ELIGFPVVTFHFAGGAELAMEATSMFYPLSEPNTFNVFCMSVKPTKEHGGEYKEFTAIGL 424

Query:   420 MAQQNYNVAYDIGGKKLAFERVDCELLDD 448
             MAQQ YN+ YD+  K +  +R+DC  LDD
Sbjct:   425 MAQQYYNIGYDLKEKNIYLQRIDCVQLDD 453
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
TAIR|locus:2126495 AT4G30030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126505 AT4G30040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VI001275
hypothetical protein (438 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-83
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-75
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 6e-48
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-37
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 9e-17
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-16
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 4e-11
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-10
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-06
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 6e-04
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 0.003
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  262 bits (672), Expect = 2e-83
 Identities = 152/453 (33%), Positives = 223/453 (49%), Gaps = 39/453 (8%)

Query: 2   AVALAVFYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINI 61
            +AL +F    L           +      ++LIH DS  SP+++P+E  + R++ A   
Sbjct: 4   LLALCLFSFSELSAAE-------APKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRR 56

Query: 62  SIARFAYLQAKVKSYSSNNIIDYQADVFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLL 121
           SI+R  + +      S N+    Q+D+  +     + MN +IG PP+P   + DTGS L+
Sbjct: 57  SISRVNHFRPT--DASPNDP---QSDLISNG--GEYLMNISIGTPPVPILAIADTGSDLI 109

Query: 122 WVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVK-CNFLNQCLYNQTYIRG 180
           W QC+PC DC +Q  P+FDP  SS+Y D+ C S  C    N   C+  N C Y+ +Y  G
Sbjct: 110 WTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDG 169

Query: 181 PSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQL 240
               G LA E L   ++    +    +VFGCGH+NG   D   SG+ GLG   LSL+SQL
Sbjct: 170 SFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQL 229

Query: 241 GST----FSYCVGNLNDPYYFHNKLVLGHGARIEGD---STPLEVINGR---YYITLEAI 290
           GS+    FSYC+  L+      +K+  G  A + G    STPL V       YY+TLEAI
Sbjct: 230 GSSIGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPL-VSKDPDTFYYLTLEAI 288

Query: 291 SIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRF 350
           S+G K L              G +IIDSG++ T L    Y  L   VE  +         
Sbjct: 289 SVGSKKLPYTGSSKNGVE--EGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQ 346

Query: 351 DSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGEN 410
              +LCY  T+    I  P +T HF  GA++ L   + F +      C A++P+      
Sbjct: 347 GLLSLCYSSTSD---IKLPIITAHFT-GADVKLQPLNTFVKVSEDLVCFAMIPT------ 396

Query: 411 YTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDC 443
            +S+++ G +AQ N+ V YD+  K ++F+  DC
Sbjct: 397 -SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDC 428

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 448
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.9
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.1
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.89
PF1365090 Asp_protease_2: Aspartyl protease 96.49
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.31
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.12
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 92.4
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 90.62
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 89.26
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 87.5
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 87.2
COG3577215 Predicted aspartyl protease [General function pred 86.37
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 86.17
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 84.7
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-77  Score=610.25  Aligned_cols=417  Identities=35%  Similarity=0.574  Sum_probs=342.7

Q ss_pred             HHHHHHhhhhhccCCCCCCCCceEEEEeecCCCCCCCCCCCCChHHHHHHHHHhhHHHHHHHHhhhhcCCCCCccccccc
Q 035660            8 FYSLILVPIAVAGTPTPSRPSRLIIELIHHDSVVSPYHDPNENAANRIQRAINISIARFAYLQAKVKSYSSNNIIDYQAD   87 (448)
Q Consensus         8 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~h~~s~~sp~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~   87 (448)
                      ++.|+|++..++.+..+ +..+++++|+||++||+|++.++.+..++++++++|+++|.+++.++..+       ..++.
T Consensus         4 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-------~~~~~   75 (431)
T PLN03146          4 LLALCLFSFSELSAAEA-PKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDAS-------PNDPQ   75 (431)
T ss_pred             hHHHHHHHHhhhhhccc-cCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhcccc-------CCccc
Confidence            34445555544443333 55789999999999999998888888899999999999999999754221       11333


Q ss_pred             cccccccceEEEEEEecCCCceEEEEEeCCCCceEEEcCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCC-CCC
Q 035660           88 VFPSKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNV-KCN  166 (448)
Q Consensus        88 ~~~~~~~~~Y~~~v~iGtP~q~~~l~vDTGS~~~Wv~~~~C~~C~~~~~~~ydp~~Sst~~~~~C~s~~C~~~~~~-~C~  166 (448)
                      ......+++|+++|.||||||++.|++||||+++||+|.+|..|..|.++.|||++|+||+.++|+++.|+.+... .|.
T Consensus        76 ~~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~  155 (431)
T PLN03146         76 SDLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCS  155 (431)
T ss_pred             cCcccCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCC
Confidence            3444567899999999999999999999999999999999999998889999999999999999999999987754 477


Q ss_pred             CCCCceeeeeeCCCCceeceeEEEEEEEecCCCCceeeccEEEEeEEcCCCCcCCCcceeeecCCCCCchhhhh----cC
Q 035660          167 FLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFEDRHLSGVFGLGFSRLSLVSQL----GS  242 (448)
Q Consensus       167 ~~~~~~~~~~Ygdgs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s~~~ql----~~  242 (448)
                      .++.|.|.+.|+||+.+.|.+++|+|+|++..+..+.++++.|||++.+.+.|....+||||||++++|+++||    .+
T Consensus       156 ~~~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~  235 (431)
T PLN03146        156 DENTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGG  235 (431)
T ss_pred             CCCCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCC
Confidence            66779999999999978999999999998754444678999999999888766545899999999999999998    35


Q ss_pred             ceeEeccCCCCCCCcceeEEeCCCCC---CCCccccccc--cCceEEEEEeEEEEcCEEeecCCccccccccCCCceEEe
Q 035660          243 TFSYCVGNLNDPYYFHNKLVLGHGAR---IEGDSTPLEV--INGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIID  317 (448)
Q Consensus       243 ~FS~~L~~~~~~~~~~g~l~fG~~~~---~~~~~~pl~~--~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiD  317 (448)
                      +|||||.+..+.....|.|+||+...   ..+.|+||..  .+.+|+|+|++|+||++++.++...|.  ..+.+++|||
T Consensus       236 ~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~--~~~~g~~iiD  313 (431)
T PLN03146        236 KFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKN--GVEEGNIIID  313 (431)
T ss_pred             cEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccc--cCCCCcEEEe
Confidence            89999987543333458899996431   2367899942  357999999999999999988777664  2345789999


Q ss_pred             ccCccccccHHHHHHHHHHHHHHhhhccccccc-CCcccceeccCCCccccCCeEEEEEcCCcEEEECCCceEEEeCCCe
Q 035660          318 SGSSATWLVKAGYDALLHEVESLLDMWLTRYRF-DSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRWPHS  396 (448)
Q Consensus       318 SGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~y~~~~~~~~  396 (448)
                      |||++++||+++|++|.++|.+.+... ..... ..+++|+....   ...+|+|+|+|+ |+++.||+++|++...++.
T Consensus       314 SGTt~t~Lp~~~y~~l~~~~~~~~~~~-~~~~~~~~~~~C~~~~~---~~~~P~i~~~F~-Ga~~~l~~~~~~~~~~~~~  388 (431)
T PLN03146        314 SGTTLTLLPSDFYSELESAVEEAIGGE-RVSDPQGLLSLCYSSTS---DIKLPIITAHFT-GADVKLQPLNTFVKVSEDL  388 (431)
T ss_pred             CCccceecCHHHHHHHHHHHHHHhccc-cCCCCCCCCCccccCCC---CCCCCeEEEEEC-CCeeecCcceeEEEcCCCc
Confidence            999999999999999999999887432 11111 12689997321   146999999998 8999999999999987778


Q ss_pred             EEEEEEecCCCCCCCCCceeeehhhccceEEEEECCCCEEEEecCCCCCC
Q 035660          397 FCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVDCELL  446 (448)
Q Consensus       397 ~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~C~~~  446 (448)
                      .|+++....       +.||||+.|||++|||||++++|||||+.+|+++
T Consensus       389 ~Cl~~~~~~-------~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        389 VCFAMIPTS-------SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             EEEEEecCC-------CceEECeeeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            899987542       2599999999999999999999999999999875

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
3vla_A413 Crystal Structure Of Edgp Length = 413 3e-04
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 3e-04
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 63/281 (22%)
Query: 102 TIGQ--PPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWY 159
           TI Q  P + +  V+D G   LWV      DC Q +       +SS+Y  + C +  C  
Sbjct: 25  TINQRTPLVSENLVVDLGGRFLWV------DCDQNY-------VSSTYRPVRCRTSQCSL 71
Query: 160 SPNVKCNFL----------NQC-LYNQTYIRGPSASGVLATEQLIFKTSD---EGKI-RV 204
           S ++ C             N C ++ +  +   +  G +A + +  +++D    G++  V
Sbjct: 72  SGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTV 131
Query: 205 QDVVFGCGHDNGKFEDRHLSGVFG---LGFSRLSLVSQLGSTFSY------CVGNL---- 251
              +F C   +        SGV G   LG +R++L SQ  S FS+      C+       
Sbjct: 132 PRFIFSCAPTS--LLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSN 189
Query: 252 ------NDPYYFHNKLV-----------LGHGARIEGDSTPLEVINGRYYITLEAISIGG 294
                 NDPY F   ++           L +       ST  E  +  Y+I +++I I  
Sbjct: 190 SVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP-SVEYFIGVKSIKINS 248
Query: 295 KMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLH 335
           K++ ++  + +  +   GG  I + +  T L  + Y A+  
Sbjct: 249 KIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTE 289
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-72
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-66
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 2e-65
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 5e-15
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 7e-15
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 8e-15
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 9e-15
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-14
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 8e-14
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-13
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-13
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-13
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 3e-13
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 2e-12
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 3e-12
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 8e-12
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-11
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 3e-11
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 4e-11
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-11
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 4e-11
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 5e-11
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 5e-11
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 6e-11
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-10
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-10
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 4e-10
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-09
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-09
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 5e-09
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-07
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  233 bits (594), Expect = 1e-72
 Identities = 62/376 (16%), Positives = 110/376 (29%), Gaps = 36/376 (9%)

Query: 95  SLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYS 154
            L + N     P +    ++D     LWV C           P    +  S      C S
Sbjct: 21  GLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLS 80

Query: 155 EYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSD------EGKIRVQDVV 208
                 P   C+     L +   I   +  G L  + L    +          + V   +
Sbjct: 81  CPAASRPG--CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFL 138

Query: 209 FGCGHDN--GKFEDRHLSGVFGLGFSRLSLVSQLGST------FSYCVGNLNDPYYFHNK 260
           F C       K   R+  GV GLG + +SL +QL S       F+ C+            
Sbjct: 139 FSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTS---KGA 195

Query: 261 LVLGHGARIEGDSTPLEVINGR------------YYITLEAISIGGKMLDIDPDI-FTRK 307
           ++ G            ++ +              Y + + +I I    +     I  T  
Sbjct: 196 IIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIV 255

Query: 308 TWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIG 367
              +GG +I + +    L ++ Y A        L           + LC+      +   
Sbjct: 256 GSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSN-KINAYP 314

Query: 368 FPAVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNV 427
              +      G    +  + L  Q  P   C+ V+     G    +   +G    +   V
Sbjct: 315 SVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNG---GMQPRAEITLGARQLEENLV 371

Query: 428 AYDIGGKKLAFERVDC 443
            +D+   ++ F     
Sbjct: 372 VFDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query448
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.87
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.67
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.87
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.38
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 91.58
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 86.52
2hs1_A99 HIV-1 protease; ultra-high resolution active site 85.64
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 82.54
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 81.52
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.3e-60  Score=483.87  Aligned_cols=330  Identities=19%  Similarity=0.326  Sum_probs=268.8

Q ss_pred             ccccceEEEEEEecCCCceEEEEEeCCCCceEEEcCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCC------
Q 035660           91 SKVFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVK------  164 (448)
Q Consensus        91 ~~~~~~Y~~~v~iGtP~q~~~l~vDTGS~~~Wv~~~~C~~C~~~~~~~ydp~~Sst~~~~~C~s~~C~~~~~~~------  164 (448)
                      ...+++|+++|.||||||+|.|++||||+++||+|.+|             .+|+||+.++|.++.|.......      
T Consensus        16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s   82 (413)
T 3vla_A           16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFN   82 (413)
T ss_dssp             CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSS
T ss_pred             cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCccccc
Confidence            44678999999999999999999999999999999976             47999999999999998765332      


Q ss_pred             -----CCCCCCceeeeee-CCCCceeceeEEEEEEEecCCCC----ceeeccEEEEeEEcC--CCCcCCCcceeeecCCC
Q 035660          165 -----CNFLNQCLYNQTY-IRGPSASGVLATEQLIFKTSDEG----KIRVQDVVFGCGHDN--GKFEDRHLSGVFGLGFS  232 (448)
Q Consensus       165 -----C~~~~~~~~~~~Y-gdgs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fg~~~~~--~~~~~~~~~GilGLg~~  232 (448)
                           |. ++.|.|.+.| +|++.+.|.+++|+|+|+..++.    .+.++++.|||++..  .+.+ ..++||||||++
T Consensus        83 ~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~-~~~dGIlGLg~~  160 (413)
T 3vla_A           83 GPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA-SGVVGMAGLGRT  160 (413)
T ss_dssp             CCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC-TTCCEEEECSSS
T ss_pred             CCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc-cccccccccCCC
Confidence                 33 3579999999 48877999999999999854322    368899999999986  3433 368999999999


Q ss_pred             CCchhhhh------cCceeEeccCCCCCCCcceeEEeCCCCC---------CC-Ccccccccc-------------CceE
Q 035660          233 RLSLVSQL------GSTFSYCVGNLNDPYYFHNKLVLGHGAR---------IE-GDSTPLEVI-------------NGRY  283 (448)
Q Consensus       233 ~~s~~~ql------~~~FS~~L~~~~~~~~~~g~l~fG~~~~---------~~-~~~~pl~~~-------------~~~y  283 (448)
                      ++|+++||      +++|||||.+..   ...|.|+||+.+.         .. +.|+||...             ..+|
T Consensus       161 ~lSl~sql~~~~~i~~~FS~cL~~~~---~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y  237 (413)
T 3vla_A          161 RIALPSQFASAFSFKRKFAMCLSGST---SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEY  237 (413)
T ss_dssp             SSSHHHHHHHHHTCCSEEEEECCSCS---SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSC
T ss_pred             CcchHHHHhhhcCCCceEEEeCCCCC---CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceE
Confidence            99999998      279999999842   2458899996542         24 789999433             2799


Q ss_pred             EEEEeEEEEcCEEeecCCccccccccCCCceEEeccCccccccHHHHHHHHHHHHHHhhh-cccccccC-CcccceeccC
Q 035660          284 YITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLHEVESLLDM-WLTRYRFD-SWTLCYRGTA  361 (448)
Q Consensus       284 ~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~C~~~~~  361 (448)
                      +|+|++|+||++.+.+++..|..+..+++++||||||++++||+++|++|.++|.+++.. .+++.... .++.|+....
T Consensus       238 ~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~  317 (413)
T 3vla_A          238 FIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDN  317 (413)
T ss_dssp             EECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTT
T ss_pred             EEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCC
Confidence            999999999999999988888776656789999999999999999999999999988742 22332222 2789998432


Q ss_pred             CC---ccccCCeEEEEEcC-CcEEEECCCceEEEeCCCeEEEEEEecCCCCCCCCCceeeehhhccceEEEEECCCCEEE
Q 035660          362 SH---DLIGFPAVTFHFAG-GAELVLDVDSLFFQRWPHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLA  437 (448)
Q Consensus       362 ~~---~~~~~P~i~~~f~g-g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riG  437 (448)
                      ..   ....+|+|+|+|+| +++|+||+++|+++..++..|++++......   ++.||||+.|||++|+|||++++|||
T Consensus       318 ~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~---~~~~IlGd~fl~~~~vvfD~~~~riG  394 (413)
T 3vla_A          318 ILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNL---RTSIVIGGHQLEDNLVQFDLATSRVG  394 (413)
T ss_dssp             CCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSC---SSSEEECHHHHTTEEEEEETTTTEEE
T ss_pred             ccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCc---ccceeEehhhhcCeEEEEECCCCEEE
Confidence            11   01379999999995 4899999999999877678999887754321   24799999999999999999999999


Q ss_pred             EecC
Q 035660          438 FERV  441 (448)
Q Consensus       438 fa~~  441 (448)
                      ||++
T Consensus       395 fa~~  398 (413)
T 3vla_A          395 FSGT  398 (413)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9974
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 448
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-40
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 5e-26
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-25
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-25
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-25
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 5e-25
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 3e-24
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 4e-24
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-23
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 9e-23
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-22
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-21
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-21
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 1e-20
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-20
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-20
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-20
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 5e-20
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-19
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 4e-19
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 6e-18
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 4e-14
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  146 bits (369), Expect = 2e-40
 Identities = 66/373 (17%), Positives = 122/373 (32%), Gaps = 42/373 (11%)

Query: 95  SLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYS 154
           SL+ + F  G        V+D    L+W  C      ++         ++++Y    C +
Sbjct: 14  SLYTIPFHDGASL-----VLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPA 68

Query: 155 EYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQ---DVVFGC 211
             C        +      Y    + G  A+G L+  + +  T+D  K   +    V+  C
Sbjct: 69  PSCGSD----KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAAC 124

Query: 212 GHDN-GKFEDRHLSGVFGLGFSRLSLVSQLGST--FSYCVGNLNDPYYFHNKLVLGHGAR 268
                     R  +GV GL  S L+L +Q+ S    +     L  P       + G G  
Sbjct: 125 APSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRF-LLCLPTGGPGVAIFGGGPV 183

Query: 269 IEGD------STPLEVINGR--YYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGS 320
                      TPL    G   +YI+  +I +G   + +            GGV++ +  
Sbjct: 184 PWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG-----ALATGGVMLSTRL 238

Query: 321 SATWLVKAGYDALLHEVESLLDMWLTRYRFDSWT--------LCYRGTA---SHDLIGFP 369
               L    Y  L+      L          +          +CY       +      P
Sbjct: 239 PYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVP 298

Query: 370 AVTFHFAGGAELVLDVDSLFFQRWPHSFCMAVLPSFVN--GENYTSLSLIGMMAQQNYNV 427
            V     GG++  +   +        + C+A +       G+      ++G    +++ +
Sbjct: 299 NVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVL 358

Query: 428 AYDIGGKKLAFER 440
            +D+  K+L F R
Sbjct: 359 DFDMEKKRLGFSR 371
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query448
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 82.13
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 82.08
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 80.52
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.5e-54  Score=432.32  Aligned_cols=298  Identities=19%  Similarity=0.311  Sum_probs=240.7

Q ss_pred             ccceEEEEEEecCCCceEEEEEeCCCCceEEEcCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCce
Q 035660           93 VFSLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQCL  172 (448)
Q Consensus        93 ~~~~Y~~~v~iGtP~q~~~l~vDTGS~~~Wv~~~~C~~C~~~~~~~ydp~~Sst~~~~~C~s~~C~~~~~~~C~~~~~~~  172 (448)
                      .+.+|+++|.||||||++.|++||||+++||+|.+|..|..+.++.|||++|+|++.                   ..|.
T Consensus        54 ~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~-------------------~~~~  114 (370)
T d3psga_          54 LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEA-------------------TSQE  114 (370)
T ss_dssp             TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEE-------------------EEEE
T ss_pred             cCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCccccccc-------------------CCCc
Confidence            467999999999999999999999999999999999999888999999999999998                   4789


Q ss_pred             eeeeeCCCCceeceeEEEEEEEecCCCCceeeccEEEEeEEcCCCCcC--CCcceeeecCCCCCc------hhhhh----
Q 035660          173 YNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDNGKFED--RHLSGVFGLGFSRLS------LVSQL----  240 (448)
Q Consensus       173 ~~~~Ygdgs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GilGLg~~~~s------~~~ql----  240 (448)
                      |.+.|++|+ +.|.+++|++.+++     +.++++.|||+....+.+.  ...+||+|||+...+      ++.+|    
T Consensus       115 ~~~~Yg~Gs-~~G~~~~d~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~  188 (370)
T d3psga_         115 LSITYGTGS-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQG  188 (370)
T ss_dssp             EEEESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTT
T ss_pred             EEEEeCCce-EEEEEEEEEEeeec-----eeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhhhhhc
Confidence            999999998 79999999999998     8999999999998776432  347999999987654      34443    


Q ss_pred             ---cCceeEeccCCCCCCCcceeEEeCCCC----CCCCccccccccCceEEEEEeEEEEcCEEeecCCccccccccCCCc
Q 035660          241 ---GSTFSYCVGNLNDPYYFHNKLVLGHGA----RIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGG  313 (448)
Q Consensus       241 ---~~~FS~~L~~~~~~~~~~g~l~fG~~~----~~~~~~~pl~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~  313 (448)
                         .++||+|+.+...   ..|.|+||+.+    ...+.|+|+ ....+|.|.++++.++++.+...         ++..
T Consensus       189 ~i~~~~fs~~l~~~~~---~~g~l~~Gg~d~~~~~~~l~~~p~-~~~~~w~v~~~~i~v~g~~~~~~---------~~~~  255 (370)
T d3psga_         189 LVSQDLFSVYLSSNDD---SGSVVLLGGIDSSYYTGSLNWVPV-SVEGYWQITLDSITMDGETIACS---------GGCQ  255 (370)
T ss_dssp             CSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEEC-SEETTEEEEECEEESSSSEEECT---------TCEE
T ss_pred             ccccceeEEEeecCCC---CCceEecCCcCchhcccceeEEee-cccceEEEEEeeEEeCCeEEecC---------CCcc
Confidence               5799999987532   34789999543    234567776 56789999999999999877643         2568


Q ss_pred             eEEeccCccccccHHHHHHHHHHHHHHhhhcccccccCCcccceeccCCCccccCCeEEEEEcCCcEEEECCCceEEEeC
Q 035660          314 VIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFPAVTFHFAGGAELVLDVDSLFFQRW  393 (448)
Q Consensus       314 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~y~~~~~  393 (448)
                      +||||||++++||+++|++|.+++.+...     ......++|+.      ...+|+|+|+|+ |+++.|||++|+++..
T Consensus       256 aiiDSGTs~~~lp~~~~~~i~~~l~~~~~-----~~~~~~~~C~~------~~~~P~l~f~f~-g~~~~l~~~~yi~~~~  323 (370)
T d3psga_         256 AIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSS------IDSLPDIVFTID-GVQYPLSPSAYILQDD  323 (370)
T ss_dssp             EEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGG------GGGCCCEEEEET-TEEEEECHHHHEEECS
T ss_pred             EEEecCCceEeCCHHHHHHHHHHhCCeee-----cCCcEEEeccc------cCCCceEEEEEC-CEEEEEChHHeEEEcC
Confidence            99999999999999999999998865431     11222678987      357999999997 9999999999999854


Q ss_pred             CCeEEEEEEecCCCCCCCCCceeeehhhccceEEEEECCCCEEEEecCC
Q 035660          394 PHSFCMAVLPSFVNGENYTSLSLIGMMAQQNYNVAYDIGGKKLAFERVD  442 (448)
Q Consensus       394 ~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~  442 (448)
                        ..|+..+...+.....++.||||++|||++|+|||++++||||||+.
T Consensus       324 --~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         324 --DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             --SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             --CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence              34654333222211123579999999999999999999999999963
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure