Citrus Sinensis ID: 035779

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MTKKLRDLLHDAKEVDIFPPPAPAHTSGYSAVDEDMVEQENMSHKEFMSAASSLAGKNSSSVDEATAADPLVEIQPNVTSSTEFIVIETLRTTEESKEKDDSLSLEDVKSSVAWTKESSEASQNGEILKPEKAKKTVRLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLALRSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF
ccHHHHHHHHcccccccccccccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccEEEccccccccccccccccHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHccccccccccccccccccccccEEEccccccccccEEEEccHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccc
ccHHHHHHHHcccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHcccccccccHcccccccEEEccccccccEEEEEEccccHHHHccccccccccccccccccEEEcccccccccccccccEEEEEEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHEccccEEEEEEcccccccccccHEEHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHccHccccccccccccEEEEEEcccccccEEEccccHcHEcccccccHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHccHHHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHcccccccEccHHHHHHHHHHHHHHHHHHHHHHccHHccEEEccccHHHcccccEccccc
MTKKLRDLLHdakevdifpppapahtsgysavdedmvEQENMSHKEFMSAASslagknsssvdeataadplveiqpnvtsstEFIVIETLRTteeskekddslsledvkSSVAWTKesseasqngeilkpekaKKTVRLqghennvtenvilpkalplkpcpsvgtnlEAFDLALRSIVgnhqengestGAAMMEEALERLKKSYVyfkgkpvgtfaamdpnaealnynqvfvRDFVPTALAClmiepaepEIVKNFLLKTLHLQGWEKridnftlgegvmpaSFKVLFNSHQQKETLVADfggsaigrvapvdsgFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLClsdgfdtfptllcadgcsmidrrmgiygypIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWldftqlnniyrykteeyshtavnkfnvipdsipdwvfdfmplrggylignvsparmDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLigemplkisypaldghewrivtgydpkntrwsyhnggsWPVLLWLLTAASIKTGRPQIAKRAIELAEQRlskdgwpeyydgktgryvgkqARKYQTWSIAGYLVAKMMVENPSNLLMISLEEdkkiakprlsrsasf
MTKKLRDLLHdakevdifpppapahtsgYSAVDEDMVEQENMSHKEFMSAASSLAGKNSSSVDEATAAdplveiqpnvtsstefIVIETlrtteeskekddslsledvkssvawtkesseasqngeilkpekakktvrlqghennvtenvilpkalplkPCPSVGTNLEAFDLALRSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLkperdgkelIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEqrlskdgwpeyydgktgryvgkqarKYQTWSIAGYLVAKMMVENPSNLLMISleedkkiakprlsrsasf
MTKKLRDLLHDAKEVDIFPPPAPAHTSGYSAVDEDMVEQENMSHKEFMSAASSLAGKNSSSVDEATAADPLVEIQPNVTSSTEFIVIETLRTTEESKEKDDSLSLEDVKSSVAWTKESSEASQNGEILKPEKAKKTVRLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLALRSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF
**********************************************************************************EFIVIET********************************************************VTENVILPKALPLKPCPSVGTNLEAFDLALRSIVG*****************LERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMI*******************
****LRD*LHDAKEVDIFPPPAPAHTSGYSAVDEDM***********************************VEIQPNVTSSTE*****************************************************************************************************************ALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSR****
MTKKLRDLLHDAKEVDIFPPPAPAHTSGYSAVDEDMVEQENMSHKEFMSA**************ATAADPLVEIQPNVTSSTEFIVIETLRT********************************GEILKPEKAKKTVRLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLALRSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF
*TKKLRDLLHDAKEVDIFPPPAP********************************************ADPLVEIQPNVTSSTEFIVIETLRT*******************V**************ILKPEKAKKTVRLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLAL***************AAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAK*********
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MTKKLRDLLHDAKEVDIFPPPAPAHTSGYSAVDEDMVEQENMSHKEFMSAASSLAGKNSSSVDEATAADPLVEIQPNVTSSTEFIVIETLRTTEESKEKDDSLSLEDVKSSVAWTKESSEASQNGEILKPEKAKKTVRLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLALRSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
255568126696 beta-fructofuranosidase, putative [Ricin 0.769 0.728 0.853 0.0
224064299469 predicted protein [Populus trichocarpa] 0.707 0.993 0.886 0.0
225470944 766 PREDICTED: uncharacterized protein LOC10 0.767 0.660 0.760 0.0
297745493645 unnamed protein product [Vitis vinifera] 0.867 0.886 0.681 0.0
302795855488 hypothetical protein SELMODRAFT_111393 [ 0.704 0.950 0.781 0.0
302788704562 hypothetical protein SELMODRAFT_104721 [ 0.701 0.822 0.781 0.0
302769674562 hypothetical protein SELMODRAFT_89558 [S 0.701 0.822 0.781 0.0
74476783557 neutral/alkaline invertase [Manihot escu 0.704 0.833 0.775 0.0
255571720552 beta-fructofuranosidase, putative [Ricin 0.704 0.840 0.777 0.0
288901116557 neutral/alkaline invertase 2 [Hevea bras 0.704 0.833 0.775 0.0
>gi|255568126|ref|XP_002525039.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223535701|gb|EEF37366.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  932 bits (2409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/520 (85%), Positives = 474/520 (91%), Gaps = 13/520 (2%)

Query: 144 NNVTENVILPKALP-LKPCPSVGTNLEAFD---LALRSIVGNHQENGESTGAAMMEEALE 199
           N V + V   K +P LK  PSVG NL++ D     ++SI         S   AM++EA E
Sbjct: 186 NIVFDKVQAVKIIPSLKAFPSVGVNLDSLDNVSPGVKSI---------SESGAMVDEAWE 236

Query: 200 RLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLL 259
           RL KSYV FKGKPVGT AAMDP AEALNYNQVFVRDFVP+ LACLM  P+EPEIVKNFLL
Sbjct: 237 RLNKSYVLFKGKPVGTLAAMDPGAEALNYNQVFVRDFVPSGLACLMKNPSEPEIVKNFLL 296

Query: 260 KTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWW 319
           KTLHLQG EKRIDNFTLGEGVMPAS+KVL++SH++K+ LVADFGGSAIGRVAPVDSGFWW
Sbjct: 297 KTLHLQGREKRIDNFTLGEGVMPASYKVLYDSHREKDILVADFGGSAIGRVAPVDSGFWW 356

Query: 320 IILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIY 379
           IILLRSYTK T DYALAELPEVQ+GMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIY
Sbjct: 357 IILLRSYTKSTHDYALAELPEVQKGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIY 416

Query: 380 GYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIY 439
           GYPIEIQ+LFYFALRCA+Q+LKPERDGKEL+ERIDKRITALS+HIQKYYWLDFTQLNNIY
Sbjct: 417 GYPIEIQALFYFALRCAQQLLKPERDGKELLERIDKRITALSFHIQKYYWLDFTQLNNIY 476

Query: 440 RYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAIL 499
           RYKTEEYSHTAVNKFNVIP+SIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAIL
Sbjct: 477 RYKTEEYSHTAVNKFNVIPESIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAIL 536

Query: 500 SSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGG 559
           SSLATPAQATAIM+LIEERWEDLIGEMPLKI+YPAL+GHEWR VTGYDPKNTRWSYHNGG
Sbjct: 537 SSLATPAQATAIMELIEERWEDLIGEMPLKITYPALEGHEWRTVTGYDPKNTRWSYHNGG 596

Query: 560 SWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTW 619
           SWPVLLWLL AASIK GRPQIAKRA+EL EQRLSKDGWPEYYDGKTGRYVGKQARKYQTW
Sbjct: 597 SWPVLLWLLAAASIKVGRPQIAKRAVELVEQRLSKDGWPEYYDGKTGRYVGKQARKYQTW 656

Query: 620 SIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF 659
           SIAGYLVAKMM+ENPSNLL+ISLEEDKKIAKP L+RSASF
Sbjct: 657 SIAGYLVAKMMIENPSNLLIISLEEDKKIAKPTLTRSASF 696

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224064299|ref|XP_002301418.1| predicted protein [Populus trichocarpa] gi|222843144|gb|EEE80691.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225470944|ref|XP_002264286.1| PREDICTED: uncharacterized protein LOC100262104 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745493|emb|CBI40573.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|302795855|ref|XP_002979690.1| hypothetical protein SELMODRAFT_111393 [Selaginella moellendorffii] gi|302807407|ref|XP_002985398.1| hypothetical protein SELMODRAFT_122253 [Selaginella moellendorffii] gi|300146861|gb|EFJ13528.1| hypothetical protein SELMODRAFT_122253 [Selaginella moellendorffii] gi|300152450|gb|EFJ19092.1| hypothetical protein SELMODRAFT_111393 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302788704|ref|XP_002976121.1| hypothetical protein SELMODRAFT_104721 [Selaginella moellendorffii] gi|300156397|gb|EFJ23026.1| hypothetical protein SELMODRAFT_104721 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302769674|ref|XP_002968256.1| hypothetical protein SELMODRAFT_89558 [Selaginella moellendorffii] gi|300163900|gb|EFJ30510.1| hypothetical protein SELMODRAFT_89558 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|74476783|gb|ABA08442.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
>gi|255571720|ref|XP_002526803.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223533807|gb|EEF35538.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|288901116|gb|ADC68260.1| neutral/alkaline invertase 2 [Hevea brasiliensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
TAIR|locus:2133737558 CINV2 "cytosolic invertase 2" 0.704 0.831 0.752 1.4e-197
TAIR|locus:2016064499 A/N-InvF "alkaline/neutral inv 0.704 0.929 0.754 3e-195
TAIR|locus:2116870571 A/N-InvB "alkaline/neutral inv 0.704 0.812 0.740 9.2e-194
TAIR|locus:2014676551 CINV1 "cytosolic invertase 1" 0.704 0.842 0.739 3.1e-193
TAIR|locus:2199690534 A/N-InvD "alkaline/neutral inv 0.704 0.868 0.741 1.4e-192
TAIR|locus:2171112617 INV-E "alkaline/neutral invert 0.796 0.850 0.538 1.5e-154
TAIR|locus:2027600616 A/N-InvA "alkaline/neutral inv 0.685 0.733 0.572 1.7e-146
TAIR|locus:2084329664 A/N-InvC "alkaline/neutral inv 0.710 0.704 0.559 1.2e-143
TAIR|locus:2074434659 INVH "invertase H" [Arabidopsi 0.685 0.685 0.560 4.3e-141
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1913 (678.5 bits), Expect = 1.4e-197, P = 1.4e-197
 Identities = 352/468 (75%), Positives = 410/468 (87%)

Query:   193 MMEEALERLKKSYVYFKGKPVGTFAAMD-PNAEALNYNQVFVRDFVPTALACLMIEPAEP 251
             M+ EA E L++S V+F+G+PVGT AA D  + E LNY+QVFVRDFVP+ALA LM    EP
Sbjct:    92 MVAEAWEALRRSMVFFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLM--NGEP 149

Query:   252 EIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVA 311
             +IVKNFLLKTL LQGWEKR+D F LGEGVMPASFKVL +  ++ +T++ADFG SAIGRVA
Sbjct:   150 DIVKNFLLKTLQLQGWEKRVDRFKLGEGVMPASFKVLHDPVRKTDTIIADFGESAIGRVA 209

Query:   312 PVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSM 371
             PVDSGFWWIILLR+YTK T D  L+E PE QRGM+LIL+LCLS+GFDTFPTLLCADGCSM
Sbjct:   210 PVDSGFWWIILLRAYTKSTGDLTLSETPECQRGMRLILSLCLSEGFDTFPTLLCADGCSM 269

Query:   372 IDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLD 431
             +DRRMG+YGYPIEIQ+LF+ ALRCA  MLKP+ +G++ IERI KR+ ALS+H++ Y+WLD
Sbjct:   270 VDRRMGVYGYPIEIQALFFMALRCALSMLKPDEEGRDFIERIVKRLHALSFHMRSYFWLD 329

Query:   432 FTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFL 491
             F QLN+IYRYKTEEYSHTAVNKFNV+PDSIPDWVFDFMPLRGGY +GNVSPARMDFRWF 
Sbjct:   330 FQQLNDIYRYKTEEYSHTAVNKFNVMPDSIPDWVFDFMPLRGGYFVGNVSPARMDFRWFS 389

Query:   492 VGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNT 551
             +GNC++ILSSLATP Q+ AIMDL+E RWE+L+GEMPLKI YP ++ HEWRIVTG DPKNT
Sbjct:   390 LGNCVSILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCIESHEWRIVTGCDPKNT 449

Query:   552 RWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGK 611
             RWSYHNGGSWPVLLW LTAA IKTGRPQIA+RAI+L E RL +D WPEYYDGK GRYVGK
Sbjct:   450 RWSYHNGGSWPVLLWTLTAACIKTGRPQIARRAIDLIESRLHRDCWPEYYDGKQGRYVGK 509

Query:   612 QARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSRSASF 659
             QARKYQTWSIAGYLVAKMM+E+PS++ MISLEEDK++ KP + RSAS+
Sbjct:   510 QARKYQTWSIAGYLVAKMMLEDPSHIGMISLEEDKQM-KPVIKRSASW 556
GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=IGI;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005829 "cytosol" evidence=NAS
GO:0005987 "sucrose catabolic process" evidence=IGI
GO:0048364 "root development" evidence=IGI
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.25LOW CONFIDENCE prediction!
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
pfam12899437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 0.0
PLN03005550 PLN03005, PLN03005, beta-fructofuranosidase 0.0
PLN02973571 PLN02973, PLN02973, beta-fructofuranosidase 0.0
PLN02703618 PLN02703, PLN02703, beta-fructofuranosidase 0.0
pfam06202367 pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase 1e-04
COG3408641 COG3408, GDB1, Glycogen debranching enzyme [Carboh 2e-04
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information 
 Score =  846 bits (2189), Expect = 0.0
 Identities = 312/440 (70%), Positives = 373/440 (84%), Gaps = 4/440 (0%)

Query: 196 EALERLKKSYVYFKGKPVGTFAAMDPNAE-ALNYNQVFVRDFVPTALACLMIEPAEPEIV 254
           EA E L+KS VY++G+PVGT AA+DP+AE ALNY+Q F+RDFVP+ALA L+     PEIV
Sbjct: 1   EAWELLEKSLVYYQGRPVGTVAALDPSAEDALNYDQCFIRDFVPSALAFLL--KGRPEIV 58

Query: 255 KNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVD 314
           +NFLL+TL LQ  EK +D F  G GVMPASFKVL +  ++ ETL+ADFG  AIGRVAPVD
Sbjct: 59  RNFLLETLQLQSQEKTVDCFEPGRGVMPASFKVLHDKDEE-ETLIADFGERAIGRVAPVD 117

Query: 315 SGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDR 374
           SG WWIILLR+Y K T DY+ AE P+VQRG++LIL+LCLSD FD FPTLL  DG  MIDR
Sbjct: 118 SGLWWIILLRAYVKATGDYSFAESPDVQRGIRLILDLCLSDRFDMFPTLLVPDGAFMIDR 177

Query: 375 RMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQ 434
           RMG+YG+P+EIQ+LFY ALRCAR++L+P+ DGK+LIERID R+ AL +HI++YYWLD  +
Sbjct: 178 RMGVYGHPLEIQALFYGALRCARELLEPDEDGKDLIERIDNRLRALRFHIREYYWLDLDR 237

Query: 435 LNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGN 494
           LN IYRYKTEEY   AVNKFN+ P+SIPDW+FD++P RGGYLIGN+ P RMDFR+F +GN
Sbjct: 238 LNEIYRYKTEEYGDDAVNKFNIYPESIPDWLFDWLPERGGYLIGNLGPGRMDFRFFSLGN 297

Query: 495 CIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWS 554
            +AILSSLAT  Q+ AIMDLIEERW+DLIGEMP+KI YPAL+G EWRIVTG DPKNT WS
Sbjct: 298 LLAILSSLATEEQSQAIMDLIEERWDDLIGEMPMKICYPALEGEEWRIVTGCDPKNTPWS 357

Query: 555 YHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQAR 614
           YHNGGSWPVLLWLLTAA++KTGRP +A+RAIE+AE+RL KD WPEYYDGKTGR VGKQAR
Sbjct: 358 YHNGGSWPVLLWLLTAAALKTGRPDLAERAIEIAEKRLPKDEWPEYYDGKTGRLVGKQAR 417

Query: 615 KYQTWSIAGYLVAKMMVENP 634
           KYQTW+IAG+L+AK ++ENP
Sbjct: 418 KYQTWTIAGFLLAKHLLENP 437

This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. Length = 437
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|114894 pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase Back     alignment and domain information
>gnl|CDD|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 659
PLN02703618 beta-fructofuranosidase 100.0
PLN02973571 beta-fructofuranosidase 100.0
PLN03005550 beta-fructofuranosidase 100.0
PF12899436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 100.0
COG3408641 GDB1 Glycogen debranching enzyme [Carbohydrate tra 100.0
TIGR01561575 gde_arch glycogen debranching enzyme, archaeal typ 100.0
TIGR015311464 glyc_debranch glycogen debranching enzymye. glycog 100.0
PRK10137786 alpha-glucosidase; Provisional 100.0
KOG36251521 consensus Alpha amylase [Carbohydrate transport an 99.93
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 99.89
COG34591056 Cellobiose phosphorylase [Carbohydrate transport a 99.83
PRK13271569 treA trehalase; Provisional 99.79
PLN02567554 alpha,alpha-trehalase 99.73
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 99.7
PRK13272542 treA trehalase; Provisional 99.69
PRK13270549 treF trehalase; Provisional 99.65
PF01204512 Trehalase: Trehalase; InterPro: IPR001661 O-Glycos 99.63
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 99.62
COG3387612 SGA1 Glucoamylase and related glycosyl hydrolases 99.44
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 99.38
PF03200801 Glyco_hydro_63: Mannosyl oligosaccharide glucosida 99.19
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 99.04
PF00723448 Glyco_hydro_15: Glycosyl hydrolases family 15; Int 98.75
COG1626558 TreA Neutral trehalase [Carbohydrate transport and 98.74
KOG0602600 consensus Neutral trehalase [Carbohydrate transpor 98.63
PF06824424 DUF1237: Protein of unknown function (DUF1237); In 98.09
KOG2119879 consensus Predicted bile acid beta-glucosidase [Ca 97.83
KOG2161849 consensus Glucosidase I [Carbohydrate transport an 97.72
COG3538434 Uncharacterized conserved protein [Function unknow 97.31
>PLN02703 beta-fructofuranosidase Back     alignment and domain information 
Probab=100.00  E-value=2.3e-133  Score=1086.21  Aligned_cols=534  Identities=55%  Similarity=0.978  Sum_probs=505.9

Q ss_pred             ccccchhhhhhhhcccccCCCCccChh---hhhhhh----hhccCCccccccccccccccCCCCCCccccccchhhhh--
Q 035779          105 LEDVKSSVAWTKESSEASQNGEILKPE---KAKKTV----RLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLAL--  175 (659)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  175 (659)
                      -.+++.++++++.+.|++++|++....   |||||+    ||||||   |+|.++|++||++|+.+   ++|.+..+.  
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  116 (618)
T PLN02703         43 KVRCTNSHEYSSVSACQDADGSFHSSNECLKGKKFVQMRCKCQKHD---VEESIRSTLLPSDGLKS---DLDEMPLPVNG  116 (618)
T ss_pred             ccccccccceeccCcccccccccccchhhhhhhhHHHHhhhhhhhh---hhccccccccccccccc---ccccccCcccC
Confidence            356789999999999999999985443   499999    899999   99999999999999987   445554443  


Q ss_pred             -ccccCCCCCCCCCCcchHHHHHHHHHHhhhccccCccceeeccCCCCc-ccCCCCCCchhhhHHHHHHHHhcCCCCHHH
Q 035779          176 -RSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNA-EALNYNQVFVRDFVPTALACLMIEPAEPEI  253 (659)
Q Consensus       176 -~~~~~~~~~~~~~~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~-~~~nY~~vfGRDt~IS~lglLl~~~g~pei  253 (659)
                       .+..|+..   ++++++++++||++|++|||+|+|+|+|||||.|+++ .++||++||+||++|+++++|+.  |++||
T Consensus       117 ~~~~~~~~~---~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~--Ge~eI  191 (618)
T PLN02703        117 SFSSNGNAQ---SVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLK--GEYDI  191 (618)
T ss_pred             cCCCCCccc---ccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHC--CCHHH
Confidence             44445444   4589999999999999999999999999999999864 67999999999999999999998  99999


Q ss_pred             HHHHHHHHHhhccccccccccccCCCccCCcceeccccccc-----ccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 035779          254 VKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQ-----KETLVADFGGSAIGRVAPVDSGFWWIILLRSYTK  328 (659)
Q Consensus       254 ar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~-----~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~  328 (659)
                      ||+||.++++||+++|++|+|+.++|+||.+|||+++|.++     ++.+.+|||+.+||++++|||+|||||++++|.+
T Consensus       192 VrnFl~~tL~lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k  271 (618)
T PLN02703        192 VRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGK  271 (618)
T ss_pred             HHHHHHHHHhhhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987543     4578899999999999999999999999999999


Q ss_pred             HcCChhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChH
Q 035779          329 CTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKE  408 (659)
Q Consensus       329 ~TGD~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~  408 (659)
                      .|||.+|++++.||++|+.|++.|+.++|+++|+|+++|++||+|+||+++|+|+|||+|||.||||+.+|+....+.++
T Consensus       272 ~TgD~sf~e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e  351 (618)
T PLN02703        272 CTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVD  351 (618)
T ss_pred             hhccHHHhhhhhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987767788


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCccccc
Q 035779          409 LIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFR  488 (659)
Q Consensus       409 ~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~R  488 (659)
                      .++++..|+..|+.||+++||+|.+++|+||||+||+|++.|.|+|||||++||+|+.+|||++||||+|||+|+++|||
T Consensus       352 ~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfR  431 (618)
T PLN02703        352 LIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFR  431 (618)
T ss_pred             HHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHH
Q 035779          489 WFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLL  568 (659)
Q Consensus       489 ifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~  568 (659)
                      ||++||+||+++||++++|+++||++|+++|++|++.||+|+|+|++++.+||++|+++|+|.||||||||+||.++|++
T Consensus       432 ffsLGNlLAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~  511 (618)
T PLN02703        432 FFTLGNLWSIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQL  511 (618)
T ss_pred             hhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCChHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCChhhhccchhhhcc
Q 035779          569 TAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKI  648 (659)
Q Consensus       569 ~~Al~k~G~~~~A~~ll~~~~~~l~~~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~  648 (659)
                      ++|++|+|+.+.|+++++.++.++..+.|||||||++|+|+|++||.+||||||+||+++++|+||+++++++|+|++++
T Consensus       512 ~aA~iK~Gr~~lA~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~  591 (618)
T PLN02703        512 TVASIKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDL  591 (618)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998876


Q ss_pred             c
Q 035779          649 A  649 (659)
Q Consensus       649 ~  649 (659)
                      .
T Consensus       592 ~  592 (618)
T PLN02703        592 R  592 (618)
T ss_pred             h
Confidence            3

>PLN02973 beta-fructofuranosidase Back     alignment and domain information
>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>PRK10137 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13271 treA trehalase; Provisional Back     alignment and domain information
>PLN02567 alpha,alpha-trehalase Back     alignment and domain information
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>PRK13272 treA trehalase; Provisional Back     alignment and domain information
>PRK13270 treF trehalase; Provisional Back     alignment and domain information
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3538 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 3e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 1e-07
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 9e-06
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 3e-05
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 Back     alignment and structure
 Score = 84.8 bits (209), Expect = 3e-17
 Identities = 63/452 (13%), Positives = 127/452 (28%), Gaps = 64/452 (14%)

Query: 196 EALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVK 255
           + L+ +  ++  ++ +    ++      E      +  RD    A++      A PE+ +
Sbjct: 311 QGLDTMINAWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVP---HANPEMTR 367

Query: 256 NFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDS 315
             ++  L  Q       +    +   P    V  +         +D       +    D 
Sbjct: 368 KRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPSDEDKIHGIKDTCSDD 427

Query: 316 GFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCLS--------DGFDTFPTLLC 365
             W I  +  Y   T + +  +  +P    G   +     +         G       L 
Sbjct: 428 HLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLR 487

Query: 366 ADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQ 425
           AD     D      G    +  L ++AL+    + K      + +    +    +    +
Sbjct: 488 ADWN---DCLNLGGGESSMVSFLHFWALQEFIDLAKFLGK-DQDVNTYTEMAANVREACE 543

Query: 426 KYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARM 485
            + W D  +     R  T+                             G  IG  +  + 
Sbjct: 544 THLWDD--EGGWYIRGLTKN----------------------------GDKIG--TAQQQ 571

Query: 486 DFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTG 545
           + R  L  N +A+LS LA+  +    MD ++E      G      S+   +     + T 
Sbjct: 572 EGRVHLESNTLAVLSGLASQERGEQAMDAVDEHLFSPYGLHLNAPSFSTPNDDIGFV-TR 630

Query: 546 YDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGW-------- 597
                      NG  +         A  K GR   A +  +        D          
Sbjct: 631 VYQ----GVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEPY 686

Query: 598 --PEYYDGKTGRYVGKQARKYQTWSIAGYLVA 627
              ++  G+  +  G+    + T +      A
Sbjct: 687 SYVQFIMGRDHQDHGRANHPWLTGTSGWAYFA 718
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Length = 811 Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Length = 822 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 100.0
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 100.0
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 100.0
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 100.0
2z07_A420 Putative uncharacterized protein TTHA0978; unchara 100.0
2jg0_A535 Periplasmic trehalase; family 37, hydrolase, inhib 99.98
2okx_A956 Rhamnosidase B; alpha barrel, glycoside hydrolase 99.93
3cih_A739 Putative alpha-rhamnosidase; structural genomics, 99.91
1lf6_A684 Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica 99.85
1ulv_A 1020 Glucodextranase; GH family 15, (alpha-alpha)6-barr 99.82
2fba_A492 Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy 99.46
1gai_A472 Glucoamylase-471; hydrolase, glycosidase, polysacc 99.4
2vn4_A 599 Glucoamylase; hydrolase, carbohydrate binding, gly 99.34
2p0v_A489 Hypothetical protein BT3781; alpha-beta protein, s 99.2
3qry_B426 Putative uncharacterized protein; alpha-alpha six 98.92
3p2c_A463 Putative glycosyl hydrolase; structural genomics, 98.88
3qt9_A427 Putative uncharacterized protein CPE0426; alpha-al 98.86
2eab_A899 Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi 93.52
2rdy_A803 BH0842 protein; PSI-II, structural genomics, prote 89.84
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 89.75
1h54_A754 Maltose phosphorylase; hydrolase, maltose metaboli 87.42
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-35  Score=344.80  Aligned_cols=339  Identities=17%  Similarity=0.175  Sum_probs=253.6

Q ss_pred             Cch-hhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCC
Q 035779          231 VFV-RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGR  309 (659)
Q Consensus       231 vfG-RDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~  309 (659)
                      -|| ||.+.-+++++.   ..||.||+.|+.++..|.          .+|.+|+.|.    |..+.       |...++ 
T Consensus       363 ~~G~RD~~qd~~~~~~---~~pe~ar~~il~~~~~Q~----------~dG~v~h~~~----p~~~~-------g~~~~~-  417 (822)
T 3rrs_A          363 GMGFRDSNQDLLGFVH---LIPERARERIIDIASTQF----------ADGSAYHQYQ----PLTKR-------GNNDIG-  417 (822)
T ss_dssp             CEEHHHHHHHHHHHTT---TCHHHHHHHHHHHHTTCC----------TTSCCCSEEE----TTTTE-------ECTTTC-
T ss_pred             CCchHHHHHHHHHHHh---cCHHHHHHHHHHHHHhhc----------ccCcccceec----CcCCC-------CccCCC-
Confidence            466 999999999987   689999999999888764          4799999662    21111       111111 


Q ss_pred             cCCCCcHHHHHHHHHHHHHHcCChhhhcc---------------HHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccc
Q 035779          310 VAPVDSGFWWIILLRSYTKCTRDYALAEL---------------PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDR  374 (659)
Q Consensus       310 v~sVDatLWfIill~~Y~~~TGD~sfl~~---------------p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~  374 (659)
                      ...+|.+||+|+++++|++.|||.+|+++               ++++++++++++....+|+.   .+..+||.+.|+.
T Consensus       418 ~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GLp---~~g~gDWnD~ln~  494 (822)
T 3rrs_A          418 SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRGPHGLP---LIGRADWNDCLNL  494 (822)
T ss_dssp             SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBCTTSSB---BCBTCSSSTTCCT
T ss_pred             CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCCCCCCc---ccCCCcchhhccc
Confidence            12489999999999999999999999972               48999999999765444543   3335677766653


Q ss_pred             c-----C-----------CCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhh
Q 035779          375 R-----M-----------GIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNI  438 (659)
Q Consensus       375 ~-----m-----------~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~i  438 (659)
                      .     .           ++.|.+|++++|||.||+.+++|++.+ |+.+.++++++++++|+++|+++|| |.+++.+.
T Consensus       495 ~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G~~~~A~~~~~~A~~lk~a~~~~~W-dg~~y~ra  572 (822)
T 3rrs_A          495 NCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-GLADVADRARGHVAEMRDALLTDGW-DGSWFLRA  572 (822)
T ss_dssp             TCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTB-CSSSBCCE
T ss_pred             ccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcc-CcceeEEE
Confidence            1     1           267999999999999999999999998 6778899999999999999999999 44554332


Q ss_pred             hhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHH-------HHHHH
Q 035779          439 YRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPA-------QATAI  511 (659)
Q Consensus       439 yr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~e-------qa~~V  511 (659)
                      |+.                              +| -.+|.  ....+.|+++.++.|++++|+++++       |++++
T Consensus       573 ~d~------------------------------dg-~~~gs--~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~~a  619 (822)
T 3rrs_A          573 YDY------------------------------YG-NPIGT--DAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAIKA  619 (822)
T ss_dssp             ECT------------------------------TS-CEESC--TTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHHHH
T ss_pred             EcC------------------------------CC-CCccc--cCCCCceEEeccchhHhhcCCCCcccccchHHHHHHH
Confidence            221                              11 11121  1112346889999999999999999       99999


Q ss_pred             HHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHH--
Q 035779          512 MDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAE--  589 (659)
Q Consensus       512 l~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~--  589 (659)
                      |+.|.   ++|++|+|+|+++|++...  ....+....|.|.+||||++|||.+.+++.|++++|+.++|.+++..+.  
T Consensus       620 l~~v~---~~L~t~~Girll~p~f~~~--~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~  694 (822)
T 3rrs_A          620 LDSVN---EMLATDHGMVLQYPAYTTY--QVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPA  694 (822)
T ss_dssp             HHHHH---HHTEETTEEBSEESCCSSC--CTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHH
T ss_pred             HHHHH---HHcCCCCeEEEcCCCcccc--cCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcc
Confidence            99996   4899999999999987521  1222455668999999999999999999999999999999999998762  


Q ss_pred             HH----hcCCCCCccccCCC----CCCCCCCCCccchHHHH---HH--HHHHHHhc-CCChhhhc
Q 035779          590 QR----LSKDGWPEYYDGKT----GRYVGKQARKYQTWSIA---GY--LVAKMMVE-NPSNLLMI  640 (659)
Q Consensus       590 ~~----l~~~~~pE~fDG~~----g~p~G~~ac~~QAWSaA---~~--L~a~~lL~-~P~~~~~~  640 (659)
                      .+    ....+.||+|++..    .+..|   |..|+|..+   -+  +++..+|| +|+..+|.
T Consensus       695 ~~~~~~~~~~~~Py~~~~~~~~~~~p~~G---~~~~~w~tGsa~w~~~~lve~~LGlr~~~~~L~  756 (822)
T 3rrs_A          695 YREDISDVHRLEPYVYAQMIAGKEAVRHG---EAKNSWLTGTAAWNFVTVSQYLLGVRPEYDGLV  756 (822)
T ss_dssp             HHGGGHHHHCSCSSSCEEEECCTTSTTTT---CEEEESSSTHHHHHHHHHHHTTSCEEECSSEEE
T ss_pred             cccchhHhhccCcEEEeccccccCCCCCC---CccchhhhhhHHHHHHHHHHhEEeEEEECCEEE
Confidence            22    12346799988754    23344   557777553   22  35567888 88765443
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Back     alignment and structure
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Back     alignment and structure
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* Back     alignment and structure
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* Back     alignment and structure
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A Back     alignment and structure
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* Back     alignment and structure
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* Back     alignment and structure
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 Back     alignment and structure
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* Back     alignment and structure
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* Back     alignment and structure
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A Back     alignment and structure
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* Back     alignment and structure
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 659
d1v7wa1531 a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb 3e-13
d1lf6a1397 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-te 0.002
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 69.9 bits (170), Expect = 3e-13
 Identities = 56/435 (12%), Positives = 108/435 (24%), Gaps = 59/435 (13%)

Query: 234 RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQ 293
           RD    A++     P   E+ +  ++  L  Q       +    +   P    V  +   
Sbjct: 79  RDTAQDAISVPHANP---EMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSP 135

Query: 294 QKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYA-LAELPEVQRGMKLILNLC 352
                 +D       +    D   W I  +  Y   T + +   ++     G +  +   
Sbjct: 136 TVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEH 195

Query: 353 LSDGFDTFPTLLCADGCSMI------DRRMGIYGYPIEIQSLFYFALRCARQMLKPERDG 406
           +    D     +   G          D      G    +  L ++AL+    + K     
Sbjct: 196 MKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFIDLAKFLGK- 254

Query: 407 KELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVF 466
            + +    +    +    + + W                             D    W  
Sbjct: 255 DQDVNTYTEMAANVREACETHLW-----------------------------DDEGGWYI 285

Query: 467 DFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEM 526
             +   G  +    +  + + R  L  N +A+LS LA+  +    MD ++E      G  
Sbjct: 286 RGLTKNGDKIG---TAQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDEHLFSPYGLH 342

Query: 527 PLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIE 586
               S+   +     +   Y          NG  +         A  K GR   A +  +
Sbjct: 343 LNAPSFSTPNDDIGFVTRVYQG-----VKENGAIFSHPNPWAWVAETKLGRGDRAMKFYD 397

Query: 587 LA-------EQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGY-LVAKMMVENPSNLL 638
                               Y     GR      R    W           +      +L
Sbjct: 398 ALNPYNQNDIIEKRIAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYFAVTN---YIL 454

Query: 639 MISLEEDKKIAKPRL 653
            +          P +
Sbjct: 455 GVQSGFTGLSVDPCI 469
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Length = 397 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
d1v7wa1531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 99.94
d1lf6a1397 Bacterial glucoamylase, C-terminal domain {Thermoa 99.93
d2jg0a1511 Periplasmic trehalase TreA {Escherichia coli [TaxI 99.88
d1ulva1413 Glucodextranase, domain A {Arthrobacter globiformi 99.84
d2fbaa1492 Glucoamylase {Yeast (Saccharomycopsis fibuligera) 99.2
d1gaia_472 Glucoamylase {Aspergillus awamori, variant x100 [T 99.01
d2nvpa1426 Hypothetical protein CPF0428 {Clostridium perfring 97.86
d2p0va1443 Hypothetical protein BT3781 {Bacteroides thetaiota 97.83
d1h54a1485 Lactobacillus maltose phosphorylase, central domai 92.42
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

Probab=99.94  E-value=9.7e-27  Score=249.35  Aligned_cols=363  Identities=15%  Similarity=0.110  Sum_probs=238.4

Q ss_pred             CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779          226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS  305 (659)
Q Consensus       226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~  305 (659)
                      -.|...|.||+++.+++++.   ++||+||++|+.+++.|........-....|.++....... ...+.....+.+...
T Consensus        71 ~~~~~~~~rD~~~~~~~~~~---~~pe~Ar~~L~~~~~~q~~~g~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~  146 (531)
T d1v7wa1          71 GGRTGLGYRDTAQDAISVPH---ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAP-SKSPTVVPTPSDEDK  146 (531)
T ss_dssp             SSCCSEEHHHHHHHTTSCTT---TCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC-----------------------
T ss_pred             CCCCcEEEcHHHHHHHHHHh---cCHHHHHHHHHHHHhhhhhcccchhhcCCCcCcCCcccccc-cccCcCCCCCccccc
Confidence            35666677999999999876   79999999999999988765432211112232222111000 000000000111100


Q ss_pred             -CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhcc-------------HHHHHHHHHHHHhccCCCCCcCCcccccCCCCc
Q 035779          306 -AIGRVAPVDSGFWWIILLRSYTKCTRDYALAEL-------------PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSM  371 (659)
Q Consensus       306 -aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~-------------p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~  371 (659)
                       .......+|.++|+++++++|+++|||.+|+++             .++.+++++.......+|+..      ....+|
T Consensus       147 ~~~~~~~~~d~~~~i~~a~~~Y~~~TgD~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~------~g~~dw  220 (531)
T d1v7wa1         147 IHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICK------GLRADW  220 (531)
T ss_dssp             CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTTSCBE------EETCSS
T ss_pred             cccccccccccHHHHHHHHHHHHHhhCCHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhheeCCCCCcc------cCCCcc
Confidence             001123579999999999999999999999872             445666666666554445432      222345


Q ss_pred             ccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhh
Q 035779          372 IDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAV  451 (659)
Q Consensus       372 mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~  451 (659)
                      .|...+..|..+++|+++|.||+.+++|++.+ ++.+.++++++.+++|+..|+++||++....          |     
T Consensus       221 ~d~~~~~~~~~~~~~~~~~~al~~~~~la~~~-g~~~~a~~~~~~a~~l~~~~~~~~~~~~~~~----------~-----  284 (531)
T d1v7wa1         221 NDCLNLGGGESSMVSFLHFWALQEFIDLAKFL-GKDQDVNTYTEMAANVREACETHLWDDEGGW----------Y-----  284 (531)
T ss_dssp             STTCCCEEEEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTTE----------E-----
T ss_pred             cccccCCCCccHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhcCCccccc----------e-----
Confidence            55433556778999999999999999999988 6778899999999999999999999765431          0     


Q ss_pred             cccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccc
Q 035779          452 NKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKIS  531 (659)
Q Consensus       452 nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l  531 (659)
                                    .+++..+ +..++...+  .+.+++..+|.+++++++++++|++++++.+.   .+|+++.+++.+
T Consensus       285 --------------~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~---~~l~~~~~~~~~  344 (531)
T d1v7wa1         285 --------------IRGLTKN-GDKIGTAQQ--QEGRVHLESNTLAVLSGLASQERGEQAMDAVD---EHLFSPYGLHLN  344 (531)
T ss_dssp             --------------CCEECTT-SCEESCTTC--SSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHH---HHHEETTEECSE
T ss_pred             --------------eEEEcCC-CCcccccCc--cccccchhhcchhhhcCCCCHHHHHHHHHHHH---HhhcCchhhhcc
Confidence                          0011111 122222222  23467788899999999999999999999885   489999999999


Q ss_pred             cCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHh----------cCCCCCccc
Q 035779          532 YPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRL----------SKDGWPEYY  601 (659)
Q Consensus       532 ~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l----------~~~~~pE~f  601 (659)
                      .|.+...  .........+.|..||||++||+...+++.|+++.|+.++|.+++..+....          ..+...+..
T Consensus       345 ~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~al~~~G~~d~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (531)
T d1v7wa1         345 APSFSTP--NDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEPYSYVQFI  422 (531)
T ss_dssp             ESCCCSC--CTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHHCGGGGTTCHHHHCSCTTSCEEEE
T ss_pred             ccccccc--hhhcccccccCCccccCCCcCcHHHHHHHHHHHHcCCHHHHHHHHHhhchhhhhhHHhhCCcceeeeeccc
Confidence            9976421  2222233456788999999999999999999999999999999887652111          111222333


Q ss_pred             cCCCCCCCCCCCCccchH---HHHHHH--HHHHHhc-CCChhhh
Q 035779          602 DGKTGRYVGKQARKYQTW---SIAGYL--VAKMMVE-NPSNLLM  639 (659)
Q Consensus       602 DG~~g~p~G~~ac~~QAW---SaA~~L--~a~~lL~-~P~~~~~  639 (659)
                      ++..+...|+   ..|+|   ++|+++  +...++| +|...++
T Consensus       423 ~~~~~~~~g~---~~~~~~~g~~~~~~~~l~~g~~Gir~~~~~l  463 (531)
T d1v7wa1         423 MGRDHQDHGR---ANHPWLTGTSGWAYFAVTNYILGVQSGFTGL  463 (531)
T ss_dssp             CCTTSTTTTC---EEEESSCTHHHHHHHHHHHTTSCEECCSSCB
T ss_pred             cCCCCCCCCC---CcchHHHhHHHHHHHHHHHeEeeEEEcCCeE
Confidence            4444445554   56777   455554  4456788 8876543
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} Back     information, alignment and structure
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} Back     information, alignment and structure
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure