Citrus Sinensis ID: 035808

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MARVLLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHEHHHHcccEEEEEcccccccccHHHHHHHcHHHHHHHHHHHHHHHccccEcccEHHHHHHHHcccccccccEcc
Coil and Loop (DISEMBL)
MARVLLAPTALLLSLNLIFFTLVsstyvpcpppppkshkhppapkptcprdtlklgvCANVLNDLVHlvvgtppktpccslIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNfcgkkvpsgfqca
Flexible Loop (DISEMBL)
MARVLLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Low Complexity Region (SEG)
MarvllaptalllslnlifftlVSSTYVpcpppppkshkhppapkpTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGInlnvpvslslllnFCGKKVPSGFQCA
Disordered region (IsUnstruct)
**************************************************DTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKV*******
Disordered Region (DISOPRED)
******A**ALLLSLNLIFFTLVSSTY************************TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Disordered Region (DISEMBL)
MARVLLAPTALLLSLNLIFFTLVSSTYVPC****************TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Disordered Region (DISPRO)
****LLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKS********PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARVLLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
P14009	137	14 kDa proline-rich prote	N/A	no	0.938	0.897	0.587	4e-32
Q8RW93	128	Putative lipid-binding pr	no	no	0.809	0.828	0.568	6e-26
Q01595	129	Cortical cell-delineating	N/A	no	0.656	0.666	0.574	2e-18
Q00451	346	36.4 kDa proline-rich pro	N/A	no	0.656	0.248	0.5	2e-15
P24337	80	Hydrophobic seed protein	no	no	0.557	0.912	0.418	2e-07

>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 96/131 (73%), Gaps = 8/131 (6%)

Query: 7   APTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPA-------PKPTCPRDTLKLGVCA 59
           A  AL  +LN++FF LVSST   CP P     K  P            CPRD LKLGVCA
Sbjct: 7   ASVALFFTLNILFFALVSSTE-KCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALKLGVCA 65

Query: 60  NVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNF 119
           +VLN + ++V+G+PP  PCCSL++GLV+LEAAVCLCTAIKANILG NLN+P++LSL+LN 
Sbjct: 66  DVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNN 125

Query: 120 CGKKVPSGFQC 130
           CGK+VP+GF+C
Sbjct: 126 CGKQVPNGFEC 136

May be connected with the initiation of embryogenesis or with the metabolic changes produced by the removal of auxins.
Daucus carota (taxid: 4039)

>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 77/116 (66%), Gaps = 10/116 (8%)

Query: 18  IFFTLVS--STYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPK 75
            FF  V+  +T  PCPPPP K           CPRDTLK GVC + L  LV  V+GTPP 
Sbjct: 20  FFFGHVTPGATVKPCPPPPAKQATT------KCPRDTLKFGVCGSWLG-LVSEVIGTPPS 72

Query: 76  TPCCSLIKGLVDLEAAVCLCTAIKANILGIN-LNVPVSLSLLLNFCGKKVPSGFQC 130
             CCSLIKGL D EAAVCLCTA+K +ILG+  + +PV+L+LLLN CGK VP GF C
Sbjct: 73  QECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128

Arabidopsis thaliana (taxid: 3702)

>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 64/94 (68%), Gaps = 8/94 (8%)

Query: 37  SHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCT 96
           SH H       CP D LKL VCA VL  LV   VG P    CC L++GLVDL+AA+CLCT
Sbjct: 42  SHSHG-----RCPIDALKLKVCAKVLG-LVK--VGLPQYEQCCPLLEGLVDLDAALCLCT 93

Query: 97  AIKANILGINLNVPVSLSLLLNFCGKKVPSGFQC 130
           AIKAN+LGI+LNVP+SL+ +LN CG+  P  F C
Sbjct: 94  AIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127

Delineates a novel subset of developing cortical cells. It is probably involved in some aspect of transport of molecules to or from the vasculature.

Zea mays (taxid: 4577)

>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 61/86 (70%)

Query: 45  KPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILG 104
           +PTCP D LKLG C +VL  L+H+ +G   K  CC L+ GLVDL+AA+CLCT I+  +L 
Sbjct: 258 QPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLN 317

Query: 105 INLNVPVSLSLLLNFCGKKVPSGFQC 130
           IN+ +P++L +L++ CGK  P  F+C
Sbjct: 318 INIILPIALQVLIDDCGKYPPKDFKC 343

Solanum lycopersicum (taxid: 4081)

>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 13/86 (15%)

Query: 45  KPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILG 104
           +P+CP     L +C N+L   +  V        CC+LI GL D+EA VCLC  ++A  LG
Sbjct: 5   RPSCP----DLSICLNILGGSLGTV------DDCCALIGGLGDIEAIVCLCIQLRA--LG 52

Query: 105 INLNVPVSLSLLLNFCGKKVPSGFQC 130
           I LN+  +L L+LN CG+  PS   C
Sbjct: 53  I-LNLNRNLQLILNSCGRSYPSNATC 77

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
255585177	137	14 kDa proline-rich protein DC2.15 precu	0.984	0.941	0.690	4e-42
225427023	132	PREDICTED: 14 kDa proline-rich protein D	0.832	0.825	0.781	4e-40
357477499	123	Proline-rich protein [Medicago truncatul	0.938	1.0	0.661	2e-39
225465302	133	PREDICTED: 14 kDa proline-rich protein D	1.0	0.984	0.669	6e-39
357476911	132	Cortical cell-delineating protein [Medic	0.961	0.954	0.646	1e-38
388518971	139	unknown [Lotus japonicus]	0.954	0.899	0.602	1e-38
371536783	137	lipid transfer protein [Uromyces hobsoni	0.709	0.678	0.829	1e-36
388497944	132	unknown [Lotus japonicus]	0.946	0.939	0.631	2e-36
356514246	126	PREDICTED: 14 kDa proline-rich protein D	0.946	0.984	0.664	8e-36
147854121	149	hypothetical protein VITISV_033379 [Viti	0.770	0.677	0.784	8e-36

>gi|255585177|ref|XP_002533292.1| 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis] gi|223526876|gb|EEF29086.1| 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/139 (69%), Positives = 107/139 (76%), Gaps = 10/139 (7%)

Query: 1   MARVLLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHK-HPPAPKPT-------CPRDT 52
           MA   LA TA LLS+NL+FFTLVSSTY  CPP  PK H  HP  P P        CPRDT
Sbjct: 1   MASRTLASTAFLLSINLLFFTLVSSTY--CPPSAPKGHAPHPIKPSPVPSSKPAKCPRDT 58

Query: 53  LKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVS 112
           LKLGVC ++L DL+ + VGTPPKTPCCSLI  LVDLEAAVCLCT IKA++LGINL+VPV 
Sbjct: 59  LKLGVCVDLLKDLLSVTVGTPPKTPCCSLIADLVDLEAAVCLCTTIKASLLGINLSVPVD 118

Query: 113 LSLLLNFCGKKVPSGFQCA 131
           LSLLLN+CGKKVP GF+CA
Sbjct: 119 LSLLLNYCGKKVPEGFKCA 137

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427023|ref|XP_002271461.1| PREDICTED: 14 kDa proline-rich protein DC2.15 isoform 1 [Vitis vinifera]

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 86/110 (78%), Positives = 96/110 (87%), Gaps = 1/110 (0%)

Query: 23  VSSTYVPCPP-PPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSL 81
           VSST VPCPP P PK+H   P  K  CP+DTLKLGVCA++LNDL+H VVGTPPK+PCCSL
Sbjct: 23  VSSTSVPCPPAPKPKNHHKKPPAKAVCPKDTLKLGVCADLLNDLLHAVVGTPPKSPCCSL 82

Query: 82  IKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGFQCA 131
           I GL DLEAAVCLCTAIKAN+LGI LNVPVSLSLLLN+CGKKVP+G+QCA
Sbjct: 83  IGGLADLEAAVCLCTAIKANVLGIKLNVPVSLSLLLNYCGKKVPTGYQCA 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477499|ref|XP_003609035.1| Proline-rich protein [Medicago truncatula] gi|355510090|gb|AES91232.1| Proline-rich protein [Medicago truncatula] gi|388506146|gb|AFK41139.1| unknown [Medicago truncatula]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/127 (66%), Positives = 104/127 (81%), Gaps = 4/127 (3%)

Query: 5   LLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLND 64
           + +  A+LL LN++FFT+VSSTYVPCPPPP K H H     PTCPRDT+K GVCA+VL  
Sbjct: 1   MASKVAMLLCLNILFFTVVSSTYVPCPPPPHKDHSHK---HPTCPRDTIKFGVCADVLG- 56

Query: 65  LVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKV 124
           L+++ +G PPKTPCCSLI  L +LEAAVCLCTA+KAN+LGINLN+P++LSL+LN+CGK V
Sbjct: 57  LINVELGKPPKTPCCSLIDDLANLEAAVCLCTALKANVLGINLNLPINLSLVLNYCGKGV 116

Query: 125 PSGFQCA 131
           P GF CA
Sbjct: 117 PKGFVCA 123

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465302|ref|XP_002271871.1| PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 101/133 (75%), Gaps = 2/133 (1%)

Query: 1   MARVLLAPTALLLSLNLIFFTLVSSTYVPCPPPP--PKSHKHPPAPKPTCPRDTLKLGVC 58
           MA  ++A T+LL+SLNL+FFTLVSS +V CP P   P+   H     PTC  DTLKLGVC
Sbjct: 1   MASKVIASTSLLMSLNLLFFTLVSSNHVLCPQPRENPRRFLHNSPATPTCSVDTLKLGVC 60

Query: 59  ANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLN 118
           A +LN LVHL VGT   TPCCSL+  LVDLEAAVCLC  IKANILGINL+ PV+LSLLLN
Sbjct: 61  AGLLNGLVHLGVGTLANTPCCSLLDNLVDLEAAVCLCMIIKANILGINLSDPVALSLLLN 120

Query: 119 FCGKKVPSGFQCA 131
           +C K VPSGFQCA
Sbjct: 121 YCRKNVPSGFQCA 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476911|ref|XP_003608741.1| Cortical cell-delineating protein [Medicago truncatula] gi|355509796|gb|AES90938.1| Cortical cell-delineating protein [Medicago truncatula] gi|388519943|gb|AFK48033.1| unknown [Medicago truncatula]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 105/133 (78%), Gaps = 7/133 (5%)

Query: 5   LLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPA------PKPTCPRDTLKLGVC 58
           + +  A+LL LN+IFFT+VSSTYVPCPPPP K H H           PTCPRDT+K GVC
Sbjct: 1   MASKVAMLLCLNIIFFTVVSSTYVPCPPPPHKDHGHSHPHHPPSSKNPTCPRDTIKFGVC 60

Query: 59  ANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLN 118
           A+VL  L+++ +G PPKTPCCSLI GL +LEAAVCLCTA+KAN+LGINLN+P++LSL+LN
Sbjct: 61  ADVLG-LINVELGKPPKTPCCSLIDGLANLEAAVCLCTALKANVLGINLNLPINLSLVLN 119

Query: 119 FCGKKVPSGFQCA 131
           +CGK VP GF CA
Sbjct: 120 YCGKGVPKGFVCA 132

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518971|gb|AFK47547.1| unknown [Lotus japonicus]

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/141 (60%), Positives = 112/141 (79%), Gaps = 16/141 (11%)

Query: 5   LLAPTALLLSLNLIFFTLVSSTYVPCPPPPPKSHK-------------HPPAPK-PTCPR 50
           + +  A+LL+LN++FFT+VSS+YVPCPPPP K HK              PP+ K P+CPR
Sbjct: 1   MASKAAILLTLNILFFTVVSSSYVPCPPPP-KGHKTPPSTPVPNPPSTKPPSTKQPSCPR 59

Query: 51  DTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVP 110
           DT+KLGVCA+VL  L+++ +G PPKTPCCSL++GL DLEAAVCLCTA++AN+LGINLN+P
Sbjct: 60  DTIKLGVCADVLG-LINVQLGKPPKTPCCSLLQGLADLEAAVCLCTALRANVLGINLNIP 118

Query: 111 VSLSLLLNFCGKKVPSGFQCA 131
           ++LSL+LN+CGK VP GF C+
Sbjct: 119 INLSLILNYCGKGVPKGFVCS 139

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|371536783|gb|AEX33654.1| lipid transfer protein [Uromyces hobsonii]

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 87/94 (92%), Gaps = 1/94 (1%)

Query: 37  SHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCT 96
            HKH P+ K  CP+DTLKLGVCAN+LNDLVHLVVG PPKTPCC+L+KGL DLEAA+CLCT
Sbjct: 41  GHKHHPS-KGKCPKDTLKLGVCANLLNDLVHLVVGAPPKTPCCTLLKGLADLEAALCLCT 99

Query: 97  AIKANILGINLNVPVSLSLLLNFCGKKVPSGFQC 130
           AIKAN+LGINLNVPVSLSLLLN+CGKKVP+GFQC
Sbjct: 100 AIKANVLGINLNVPVSLSLLLNYCGKKVPTGFQC 133

Source: Uromyces hobsonii

Species: Uromyces hobsonii

Genus: Uromyces

Family: Pucciniaceae

Order: Pucciniales

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|388497944|gb|AFK37038.1| unknown [Lotus japonicus]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 108/133 (81%), Gaps = 9/133 (6%)

Query: 5   LLAPTALLLSLNLIFF-TLVSSTYVPCPPPPPKSHKHPPAPKP------TCPRDTLKLGV 57
           + +  A+LL+LNL+FF  +VSST VPC PP  K HK+ P+ KP      +CPRDT+KLGV
Sbjct: 1   MASKAAILLALNLVFFFAVVSSTNVPCSPPT-KGHKNTPSTKPPSTKQPSCPRDTIKLGV 59

Query: 58  CANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLL 117
           CA+VL  L+++ +G PPKTPCCSL++GLVDLEAAVCLCTA+KAN+LGINLN+P++LSL+L
Sbjct: 60  CADVLG-LINVQLGKPPKTPCCSLLEGLVDLEAAVCLCTALKANVLGINLNLPINLSLIL 118

Query: 118 NFCGKKVPSGFQC 130
           N+CGK VP GF C
Sbjct: 119 NYCGKGVPKGFVC 131

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514246|ref|XP_003525817.1| PREDICTED: 14 kDa proline-rich protein DC2.15-like [Glycine max]

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 1/125 (0%)

Query: 7   APTALLLSLNLIFFTLVSSTYVPCPPPPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLV 66
           +  ALLL LN++FFT+VSSTYVPC PPP      P   + +CP+DTLK GVCA+VL  L+
Sbjct: 3   SKAALLLCLNILFFTVVSSTYVPCNPPPKVPKHPPSPKQASCPKDTLKFGVCADVLG-LI 61

Query: 67  HLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPS 126
           ++ +G PPKTPCC+LI+GL DLEAAVCLCTA+KAN+LGINLNVPV L LLLN+CGK VP 
Sbjct: 62  NVQLGKPPKTPCCNLIQGLADLEAAVCLCTALKANVLGINLNVPVKLGLLLNYCGKGVPK 121

Query: 127 GFQCA 131
           GF CA
Sbjct: 122 GFVCA 126

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854121|emb|CAN80712.1| hypothetical protein VITISV_033379 [Vitis vinifera]

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 80/102 (78%), Positives = 88/102 (86%), Gaps = 1/102 (0%)

Query: 23  VSSTYVPCPP-PPPKSHKHPPAPKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSL 81
           VSST VPCPP P PK+H   P  K  CP+DTLKLGVCA++LNDL+H VVGTPPK+PCCSL
Sbjct: 23  VSSTSVPCPPAPKPKNHHKKPPAKAVCPKDTLKLGVCADLLNDLLHAVVGTPPKSPCCSL 82

Query: 82  IKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKK 123
           I GL DLEAAVCLCTAIKAN+LGI LNVPVSLSLLLN+CGKK
Sbjct: 83  IGGLADLEAAVCLCTAIKANVLGIKLNVPVSLSLLLNYCGKK 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
TAIR|locus:2050901	134	AT2G45180 [Arabidopsis thalian	0.641	0.626	0.635	4e-26
TAIR|locus:2135545	129	AT4G12510 [Arabidopsis thalian	0.648	0.658	0.635	5.2e-26
TAIR|locus:2135555	129	AT4G12520 [Arabidopsis thalian	0.648	0.658	0.635	5.2e-26
TAIR|locus:2008880	137	ELP "extensin-like protein" [A	0.633	0.605	0.626	9.7e-25
TAIR|locus:2203886	149	AT1G62510 [Arabidopsis thalian	0.633	0.557	0.626	9.7e-25
TAIR|locus:2135610	168	EARLI1 "EARLY ARABIDOPSIS ALUM	0.641	0.5	0.571	2.9e-23
TAIR|locus:2135595	161	AZI1 "azelaic acid induced 1"	0.648	0.527	0.541	2.6e-22
TAIR|locus:2135625	182	AT4G12490 [Arabidopsis thalian	0.641	0.461	0.547	7e-22
TAIR|locus:2135635	177	AT4G12500 [Arabidopsis thalian	0.641	0.474	0.535	1.1e-21
TAIR|locus:2170972	127	AT5G46900 [Arabidopsis thalian	0.618	0.637	0.635	1.1e-21

TAIR|locus:2050901 AT2G45180 [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 54/85 (63%), Positives = 67/85 (78%)

Query:    47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIX 106
             TCP DTLKLGVCA++L  LV++VVG+PPKTPCC+L++GL +LEAAVCLCTA+KAN+LGI 
Sbjct:    51 TCPTDTLKLGVCADLLG-LVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGIN 109

Query:   107 XXXXXXXXXXXXFCGKKVPSGFQCA 131
                         +CGKKVP GFQC+
Sbjct:   110 LNVPIDLTLLLNYCGKKVPHGFQCS 134

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

TAIR|locus:2135545 AT4G12510 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 54/85 (63%), Positives = 62/85 (72%)

Query:    47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIX 106
             +CP+DTLKLGVCANVL DL+ + +GTPP  PCCSL+ GLVDLEAA CLCTA+KA +LGI 
Sbjct:    45 SCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGIN 104

Query:   107 XXXXXXXXXXXXFCGKKVPSGFQCA 131
                          CGKKVPSGF CA
Sbjct:   105 LNVPVSLSLLLNVCGKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135555 AT4G12520 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 54/85 (63%), Positives = 62/85 (72%)

Query:    47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIX 106
             +CP+DTLKLGVCANVL DL+ + +GTPP  PCCSL+ GLVDLEAA CLCTA+KA +LGI 
Sbjct:    45 SCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGIN 104

Query:   107 XXXXXXXXXXXXFCGKKVPSGFQCA 131
                          CGKKVPSGF CA
Sbjct:   105 LNVPVSLSLLLNVCGKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2008880 ELP "extensin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 52/83 (62%), Positives = 60/83 (72%)

Query:    48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIXX 107
             CP+DTLKLGVCANVLN L+ L +G PP  PCCSLI+GL D+EAAVCLCTA+KANILGI  
Sbjct:    55 CPKDTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINL 114

Query:   108 XXXXXXXXXXXFCGKKVPSGFQC 130
                         C K++P GFQC
Sbjct:   115 NLPISLSLLLNVCSKQLPPGFQC 137

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2203886 AT1G62510 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 52/83 (62%), Positives = 59/83 (71%)

Query:    48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIXX 107
             CPRD LKLGVCANVLN L+++ +G PP  PCC+LI+GL DLEAA CLCTA+KANILGI  
Sbjct:    67 CPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKANILGINL 126

Query:   108 XXXXXXXXXXXFCGKKVPSGFQC 130
                         C KKVP GFQC
Sbjct:   127 NIPLSLSLLLNVCSKKVPRGFQC 149

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135610 EARLI1 "EARLY ARABIDOPSIS ALUMINUM INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 48/84 (57%), Positives = 61/84 (72%)

Query:    48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIXX 107
             CP D L+LGVCANVL+ L+++ +G P   PCCSLI+GLVDL+AA+CLCTA++AN+LGI  
Sbjct:    85 CPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 144

Query:   108 XXXXXXXXXXXFCGKKVPSGFQCA 131
                         C +KVPSGFQCA
Sbjct:   145 NVPISLSVLLNVCNRKVPSGFQCA 168

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009409 "response to cold" evidence=RCA;IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2135595 AZI1 "azelaic acid induced 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 46/85 (54%), Positives = 61/85 (71%)

Query:    47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIX 106
             +CP D LKLGVCANVL+ L+++ +G P    CCSLI+GLVD++AA+CLCTA++AN+LGI 
Sbjct:    77 SCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGIN 136

Query:   107 XXXXXXXXXXXXFCGKKVPSGFQCA 131
                          C +K+PSGFQCA
Sbjct:   137 LNVPISLSVLLNVCNRKLPSGFQCA 161

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009627 "systemic acquired resistance" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2135625 AT4G12490 [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 46/84 (54%), Positives = 60/84 (71%)

Query:    48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIXX 107
             CP D L+LGVCANVL+ L+++ +G P   PCCSLI+GLVDL+AAVCLCTA++AN+LGI  
Sbjct:    99 CPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINL 158

Query:   108 XXXXXXXXXXXFCGKKVPSGFQCA 131
                         C +++PS FQCA
Sbjct:   159 NVPISLSVLLNVCNRRLPSNFQCA 182

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=IMP

TAIR|locus:2135635 AT4G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 45/84 (53%), Positives = 60/84 (71%)

Query:    48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIXX 107
             CP D L+LGVCANVL+ L+++ +G P   PCCSLI+GLVDL+AA+CLCTA++AN+LGI  
Sbjct:    94 CPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 153

Query:   108 XXXXXXXXXXXFCGKKVPSGFQCA 131
                         C +++PS FQCA
Sbjct:   154 NVPISLSVLLNVCNRRLPSDFQCA 177

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2170972 AT5G46900 [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 54/85 (63%), Positives = 60/85 (70%)

Query:    47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIX 106
             TC +D LKL VCANVL DLV   V  PP + CC+LIKGLVDLEAAVCLCTA+KAN+LGI 
Sbjct:    47 TC-KDALKLKVCANVL-DLVK--VSLPPTSNCCALIKGLVDLEAAVCLCTALKANVLGIN 102

Query:   107 XXXXXXXXXXXXFCGKKVPSGFQCA 131
                          CGKKVPSGF+CA
Sbjct:   103 LNVPISLNVVLNHCGKKVPSGFKCA 127

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P14009	14KD_DAUCA	No assigned EC number	0.5877	0.9389	0.8978	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	131
cd01958	85	cd01958, HPS_like, HPS_like: Hydrophobic Protein f	8e-33
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	9e-16
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	3e-06

>gnl|CDD|238924 cd01958, HPS_like, HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

 Score =  110 bits (276), Expect = 8e-33
 Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 1/85 (1%)

Query: 46  PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGI 105
           PTCPRD LKLGVCANVL   + L+ GTP   PCC LI GL DL+AAVCLCTAIKANILGI
Sbjct: 2   PTCPRDALKLGVCANVLGLSLLLL-GTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGI 60

Query: 106 NLNVPVSLSLLLNFCGKKVPSGFQC 130
           ++N+PV+LSLLLN CG+ VP GF C
Sbjct: 61  SINIPVALSLLLNSCGRNVPPGFTC 85

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset of cortical cells. Length = 85

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 66.4 bits (162), Expect = 9e-16
 Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 48  CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINL 107
           C +  LKL  CA  L           P   CCS ++ L     A C CTAI+A +LGI  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQ-----VPSQQCCSQLRQL----QAQCRCTAIRAIVLGIEG 51

Query: 108 NVPVSLSLLLNFCGKKVPSGFQC 130
             P + + L + CG  VP G  C
Sbjct: 52  INPQAAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 42.0 bits (98), Expect = 3e-06
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 48  CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINL 107
           C +  L+L  C + L   V    G PP   CCS ++GL     A C C A++A +LGI  
Sbjct: 1   CGQVLLQLAPCLSYL---VGGSRGAPPSQQCCSQLRGLNS---AQCRCLALRAAVLGILE 54

Query: 108 N---VPVSLSLLLNFCGKKVPSG 127
                  + + L + CG   P  
Sbjct: 55  IPGLNAQNAASLPSACGVPPPYT 77

Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	100.0
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	100.0
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	96.93
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	96.73
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	96.48
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	96.28
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	93.83
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	93.3
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	92.22
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	85.7

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=100.00  E-value=4.6e-37  Score=216.56  Aligned_cols=84  Identities=77%  Similarity=1.423  Sum_probs=82.1

Q ss_pred             CCCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccc-cccccchhHHHHHHHcCCCCC
Q 035808           47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILG-INLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        47 ~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLG-i~~~ipv~l~~lln~CGk~~P  125 (131)
                      +||+|++||++|+|||| ++++.+|.+++++||++|+||+|+|||+|||+|+|+|++| |++++|++++++||.|||++|
T Consensus         1 ~CP~d~lkLgvC~~vL~-l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    1 TCPRDALKLGVCANVLG-LVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCCcchhhhhhhhhhh-hhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCc
Confidence            69999999999999995 9999999999999999999999999999999999999999 899999999999999999999


Q ss_pred             CCCccC
Q 035808          126 SGFQCA  131 (131)
Q Consensus       126 ~gf~C~  131 (131)
                      +||+|+
T Consensus        80 ~gf~C~   85 (85)
T PF14547_consen   80 SGFTCP   85 (85)
T ss_pred             CCCcCC
Confidence            999996

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=100.00  E-value=8.2e-38  Score=220.59  Aligned_cols=84  Identities=74%  Similarity=1.355  Sum_probs=82.1

Q ss_pred             CCCCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           46 PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      ++||+|++|||+|+|||+ ++++.+|+++.++||++|+||+|+|||+|||||||+|++||++|+|+++++++|.|||++|
T Consensus         2 ~~CP~dalkLgvCanvL~-l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           2 PTCPRDALKLGVCANVLG-LSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCCCcchHHhchhHhhhh-ccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCC
Confidence            589999999999999997 8899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcc
Q 035808          126 SGFQC  130 (131)
Q Consensus       126 ~gf~C  130 (131)
                      +||+|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence            99998

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=96.93  E-value=0.00042  Score=44.42  Aligned_cols=75  Identities=36%  Similarity=0.720  Sum_probs=50.9

Q ss_pred             CCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccc----cccchhHHHHHHHcCCC
Q 035808           48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGIN----LNVPVSLSLLLNFCGKK  123 (131)
Q Consensus        48 CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~----~~ipv~l~~lln~CGk~  123 (131)
                      |.....++..|...+.+..   ...++.++||..++++.   ...|+|.+++....++.    ++. .....|-+.||..
T Consensus         1 C~~~~~~~~~c~~~~~~~~---~~~~p~~~CC~~l~~~~---~~~C~C~~~~~~~~~~~~~~~~~~-~~a~~lp~~C~~~   73 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGS---PGAPPSQQCCSQLRGLN---SAQCRCLALRAAVLGILEIPGVNA-QNAASLPSACGVP   73 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCC---CCCCCchHHHHHHHHhc---ccCCcchhhhcccccccchhhhhH-HHHHhhHHhcCCC
Confidence            3444455667777763110   12355688999999997   67799999998876653    233 3455788899999


Q ss_pred             CCCCCcc
Q 035808          124 VPSGFQC  130 (131)
Q Consensus       124 ~P~gf~C  130 (131)
                      +|. +.|
T Consensus        74 ~~~-~~C   79 (79)
T smart00499       74 PPY-TDC   79 (79)
T ss_pred             CCC-CCC
Confidence            876 554

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=96.73  E-value=0.00017  Score=49.19  Aligned_cols=57  Identities=35%  Similarity=0.751  Sum_probs=34.7

Q ss_pred             CCCCCCCCcccccCCcccchhhhHHHHhhhcc-cccccccchhHHHHHHHcCCCCCCCCcc
Q 035808           71 GTPPKTPCCSLIKGLVDLEAAVCLCTAIKANI-LGINLNVPVSLSLLLNFCGKKVPSGFQC  130 (131)
Q Consensus        71 g~p~~~~CC~li~gL~d~dAA~CLCtaiKanv-LGi~~~ipv~l~~lln~CGk~~P~gf~C  130 (131)
                      +..+.++||.-++.+.+. ...|||..++... .++.+|..-.+ .|...||...|. ++|
T Consensus        39 ~~~Ps~~CC~~l~~~~~~-~~~ClC~~~~~~~~~~~~in~~~a~-~Lp~~Cg~~~~~-~~C   96 (96)
T PF14368_consen   39 GPAPSAACCSALKSVVQA-DPPCLCQLLNSPGAPGFGINVTRAL-ALPAACGVPVPP-SKC   96 (96)
T ss_dssp             -----HHHHHHHCC-----HCCHHHCCCC-CCHCHHCCTCHHHH-HHHHHCTSS-S-----
T ss_pred             CCCCCHHHHHHHHHhccC-CCCCHHHhcCccccccCCcCHHHHH-HHHHHcCCCCCC-CCC
Confidence            456678899999999774 4899999999987 55566766555 578899999998 887

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=96.48  E-value=0.00063  Score=45.74  Aligned_cols=63  Identities=30%  Similarity=0.614  Sum_probs=47.4

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPS  126 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P~  126 (131)
                      ..+|..|.....      .|.+++++||.-|+.     +-.|||.-+|...++.-+|.+-+. -|.+.||..+|.
T Consensus         3 ~~~L~~C~~ai~------~~~~Ps~~CC~~Lk~-----~~~CLC~y~~~p~l~~~i~~~~A~-~l~~~Cgv~~P~   65 (66)
T cd01959           3 PTQLSPCLPAIL------GGSPPSAACCAKLKE-----QQSCLCQYAKNPSLKQYVNSPNAR-KVLAACGVPYPN   65 (66)
T ss_pred             hhhcccCHHHHh------CCCCCCHHHHHHHhc-----CCCCeeeeecCccHHhhcCcHHHH-HHHHHcCCCCCC
Confidence            346888888753      357888999999997     237999999886666446666665 578899999874

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=96.28  E-value=0.0016  Score=43.69  Aligned_cols=66  Identities=26%  Similarity=0.538  Sum_probs=47.2

Q ss_pred             ccccchhhhhhhhhhhhhcCC---CCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGT---PPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPSGF  128 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~---p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P~gf  128 (131)
                      ..+|..|...+.      -|.   ++.+.||+-|+.+ |  . .|+|..++.....+ +|..- ...|-+.||..+|. +
T Consensus         5 ~~~L~~C~~yl~------~~~~~~~Ps~~CC~~vk~~-~--~-~C~C~~~~~~~~~~-i~~~~-a~~Lp~~Cgv~~p~-~   71 (73)
T cd04660           5 LDLLAECQPYVT------GPNPPPPPSRECCAALRRA-D--L-PCLCRYKTSLVLQI-IDPDK-AVYLPAKCGLPLPP-S   71 (73)
T ss_pred             HHHHHHHHHHHc------CCCCCCCCCHHHHHHHHcC-C--c-CCEeeccCCCcccc-cCHHH-HHHHHHHcCCCCCC-C
Confidence            346777888763      122   3567899999985 2  2 39999998876643 55554 44688899999999 9


Q ss_pred             cc
Q 035808          129 QC  130 (131)
Q Consensus       129 ~C  130 (131)
                      +|
T Consensus        72 ~C   73 (73)
T cd04660          72 SC   73 (73)
T ss_pred             CC
Confidence            88

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=93.83  E-value=0.0075  Score=40.89  Aligned_cols=67  Identities=22%  Similarity=0.528  Sum_probs=48.5

Q ss_pred             cccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhccccc-----------ccccchhHHHHHHHcC
Q 035808           53 LKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGI-----------NLNVPVSLSLLLNFCG  121 (131)
Q Consensus        53 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi-----------~~~ipv~l~~lln~CG  121 (131)
                      ..+..|...+.|-.     ..+.++||.-|+.|    -..|.|.+||..+.++           .++... ...|-+.||
T Consensus        13 ~~l~~c~~~~~~~~-----~~~~~~CC~~L~~l----~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~-a~~LP~~C~   82 (90)
T PF00234_consen   13 VRLSPCLPYLQGGC-----QQPSQQCCQQLRQL----DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQR-AQNLPSMCN   82 (90)
T ss_dssp             SHHHGGHHHHTTSS-----SHHHHHHHHHHHHH----HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHH-HHHHHHHTT
T ss_pred             ccccccHHHHhccc-----ccchHHHhHHHHHH----hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHH-HHHHHHHCC
Confidence            56777877764111     13457899999999    8899999999988873           444443 456888999


Q ss_pred             CCCCCCCcc
Q 035808          122 KKVPSGFQC  130 (131)
Q Consensus       122 k~~P~gf~C  130 (131)
                      ..+|. |.|
T Consensus        83 v~~~~-~~C   90 (90)
T PF00234_consen   83 VSPPY-TDC   90 (90)
T ss_dssp             SSSSS-S-G
T ss_pred             CCCCC-CCC
Confidence            99987 665

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=93.30  E-value=0.065  Score=38.46  Aligned_cols=25  Identities=28%  Similarity=0.262  Sum_probs=16.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHHHhhc
Q 035808            1 MARVLLAPTALLLSLNLIFFTLVSS   25 (131)
Q Consensus         1 MAsk~~~~~al~l~lnll~f~~~~~   25 (131)
                      ||||+--.+++||++.||++|-+++
T Consensus         1 MaSK~~llL~l~LA~lLlisSevaa   25 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVAA   25 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhhh
Confidence            9999644456666666666665554

Some of them may be involved in resistance to environmental stress [].

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=92.22  E-value=0.053  Score=34.56  Aligned_cols=48  Identities=33%  Similarity=0.655  Sum_probs=31.8

Q ss_pred             CCCCCCCcccccCCcccchhhhHHHHhhhccccc-cc-ccchhHHHHHHHcC
Q 035808           72 TPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGI-NL-NVPVSLSLLLNFCG  121 (131)
Q Consensus        72 ~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi-~~-~ipv~l~~lln~CG  121 (131)
                      ..+.++||.-++.+.+.| ..|||..+|...... .+ |.. ....|-+.||
T Consensus        13 ~~Ps~~CC~~l~~~~~~~-~~ClC~~~~~~~~~~~~~~~~~-~a~~LP~~Cg   62 (63)
T cd00010          13 TAPPSDCCSGLKSVVKSD-PKCLCAALNGPGASLLGLKNAT-RALALPAACG   62 (63)
T ss_pred             CCCChHHHHHHHHHHhcC-hhhHHHHHcCccccccCcccHH-HHHhchHhcC
Confidence            356788999999997764 469999999866432 11 222 2335666676

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=85.70  E-value=0.28  Score=33.60  Aligned_cols=68  Identities=32%  Similarity=0.534  Sum_probs=43.2

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc----chhhhHHHHhhhcccccc-cccchhHHHHHHHcCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL----EAAVCLCTAIKANILGIN-LNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~----dAA~CLCtaiKanvLGi~-~~ipv~l~~lln~CGk~~P  125 (131)
                      ..+|.-|.+.+.|-     +..+.++||.-++.|.+.    +...|+|.-+|....++. +|...++ .|=..||-..|
T Consensus         7 ~~~l~~C~~y~~g~-----~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~-~LP~~C~v~~~   79 (89)
T cd01960           7 TSLLAPCLGYLTGG-----GPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAA-GLPGKCGVSIP   79 (89)
T ss_pred             HhhHHhHHHHHhCC-----CCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHH-hChHhcccCCC
Confidence            34677788877421     235678899999998654    223466666776665554 5554443 46668988754

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	131
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	2e-23

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1 Length = 80

 Score = 85.3 bits (211), Expect = 2e-23
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 13/87 (14%)

Query: 44  PKPTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANIL 103
            +P+CP     L +C N+L   +           CC+LI GL D+EA VCLC  ++A  +
Sbjct: 4   TRPSCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGI 53

Query: 104 GINLNVPVSLSLLLNFCGKKVPSGFQC 130
              LN+  +L L+LN CG+  PS   C
Sbjct: 54  ---LNLNRNLQLILNSCGRSYPSNATC 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	99.96
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	96.6
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	96.04
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	95.79
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	93.59
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	93.11
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	88.95
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	88.26
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	83.41
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	81.64

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=99.96  E-value=1.4e-31  Score=185.96  Aligned_cols=73  Identities=49%  Similarity=1.040  Sum_probs=66.6

Q ss_pred             CCCCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           46 PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      ++||    |||+|+|||||++    |  +.++|||+|+||+|+|||+|||||||+  ||| +|+|+++++|+|.|||++|
T Consensus         6 ~~CP----kLgvCanvL~g~~----~--~~~~CC~Ll~GL~dleAAvCLCtaik~--Lgi-lnlpv~L~llln~Cgk~~P   72 (80)
T 1hyp_A            6 PSCP----DLSICLNILGGSL----G--TVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYP   72 (80)
T ss_dssp             CCSC----CCGGGGGGGGTCC----T--THHHHHHHHHTSCHHHHHHHHHHHHHH--HTC-SCHHHHHHHHHHHTTCSSC
T ss_pred             CCCC----chhHHHHHhCcCC----C--CCCccchhhhCcchhhhhhhhhhhccc--cce-eecChhHHHHHHHhCCcCc
Confidence            4799    8999999997543    2  568999999999999999999999994  899 9999999999999999999


Q ss_pred             CCCccC
Q 035808          126 SGFQCA  131 (131)
Q Consensus       126 ~gf~C~  131 (131)
                      +||+|+
T Consensus        73 ~gF~C~   78 (80)
T 1hyp_A           73 SNATCP   78 (80)
T ss_dssp             CCCCCS
T ss_pred             CCCCCC
Confidence            999996

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=96.60  E-value=0.00056  Score=44.64  Aligned_cols=61  Identities=30%  Similarity=0.616  Sum_probs=46.0

Q ss_pred             cccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           53 LKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        53 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      .+|..|...+.      -|.++..+||.-|++     ...|+|..+|...++..||.+.+. .|...||..+|
T Consensus         5 ~~L~pC~~~v~------~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A~-~Lp~~Cgv~~P   65 (67)
T 1n89_A            5 SQLAVCASAIL------SGAKPSGECCGNLRA-----QQGCFCQYAKDPTYGQYIRSPHAR-DTLTSCGLAVP   65 (67)
T ss_dssp             STTHHHHHHHT------TCCCCCHHHHHHHHH-----HSSHHHHGGGCSTTHHHHTCHHHH-HHHHHHTSCCS
T ss_pred             hhcccCHHHHc------CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHHH-HHHHHcCCCCC
Confidence            36788988763      145677789999985     478999999976665456666665 47789999988

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=96.04  E-value=0.00057  Score=44.86  Aligned_cols=61  Identities=28%  Similarity=0.603  Sum_probs=45.7

Q ss_pred             cccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           53 LKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        53 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      .+|..|...+.      -|.++..+||.-|++     ...|+|..+|...++..||.+.+. .|...||..+|
T Consensus         6 ~~L~pC~~~v~------~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A~-~Lp~~Cgv~~P   66 (69)
T 1l6h_A            6 GQLTVCTGAIA------GGARPTAACCSSLRA-----QQGCFCQFAKDPRYGRYVNSPNAR-KAVSSCGIALP   66 (69)
T ss_dssp             TTHHHHHHHHT------TCCSTTHHHHHHHHH-----HHHHHHHHTTCSSHHHHTTTTTGG-GCCCCCSSCSC
T ss_pred             hhcccCHHHHc------CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHHH-HHHHHcCCCCC
Confidence            36788988763      145677789999985     489999999876665456666665 47788999987

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=95.79  E-value=0.0025  Score=42.19  Aligned_cols=70  Identities=23%  Similarity=0.506  Sum_probs=47.7

Q ss_pred             CCCCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhh---hcccccccccchhHHHHHHHcCC
Q 035808           46 PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIK---ANILGINLNVPVSLSLLLNFCGK  122 (131)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiK---anvLGi~~~ipv~l~~lln~CGk  122 (131)
                      ..|-.+..+|..|...+.+    .-..++..+||.-|++ +|   -.|||..++   +.-+||  |...++ .|-..||.
T Consensus         3 ~~C~~~~~~L~pC~~yv~~----~~~~~Ps~~CC~~lk~-~~---~~ClC~~~~~~~~~~~gi--n~~~A~-~LP~~Cgv   71 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSK----ENPTSPSQPCCTALQH-AD---FACLCGYKNSPWLGSFGV--DPELAS-ALPKQCGL   71 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBS----SSCCCCCHHHHHHHTT-CC---HHHHHTTTTCHHHHHHTB--CHHHHH-HHHHHTTC
T ss_pred             chHHhHHHhHhhCHHHHcC----CCCCCCCHHHHHHHHh-cC---cCCcCcccCCcchhhcCc--CHHHHH-HHHHHcCC
Confidence            3577777788889887631    0013566789999998 33   389999887   333454  454455 57789999


Q ss_pred             CCCC
Q 035808          123 KVPS  126 (131)
Q Consensus       123 ~~P~  126 (131)
                      .+|.
T Consensus        72 ~~p~   75 (77)
T 2rkn_A           72 ANAP   75 (77)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9874

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=93.59  E-value=0.016  Score=39.58  Aligned_cols=69  Identities=28%  Similarity=0.555  Sum_probs=45.8

Q ss_pred             CCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc-----c-hhhhHHHHhhhccccc-ccccchhHHHHHHHc
Q 035808           48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL-----E-AAVCLCTAIKANILGI-NLNVPVSLSLLLNFC  120 (131)
Q Consensus        48 CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~-----d-AA~CLCtaiKanvLGi-~~~ipv~l~~lln~C  120 (131)
                      |-....+|.-|.+.+.|      |.++..+||.-+++|.+.     | -+.|+|.  |...-++ .+|...+. .|-..|
T Consensus         3 C~~v~~~L~pCl~yv~~------~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~~~~~~in~~~A~-~LP~~C   73 (91)
T 1siy_A            3 CGQVQGNLAQCIGFLQK------GGVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAAGAVRGINPNNAE-ALPGKC   73 (91)
T ss_dssp             TTTTHHHHHHHHHHHTS------CSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHTTCCSSCCHHHHH-HHHHHH
T ss_pred             HHHHHHhccCcHHHHhC------CCCCcHHHHHHHHHHHhhhccCCCCCcCCccc--CCcccccCCcCHHHHH-HHHHHc
Confidence            55555678888888741      334667899999998643     3 2689997  4332223 45555555 577899


Q ss_pred             CCCCC
Q 035808          121 GKKVP  125 (131)
Q Consensus       121 Gk~~P  125 (131)
                      |..+|
T Consensus        74 gv~~p   78 (91)
T 1siy_A           74 GVNIP   78 (91)
T ss_dssp             TCCCS
T ss_pred             CCCCC
Confidence            99876

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=93.11  E-value=0.008  Score=41.19  Aligned_cols=67  Identities=22%  Similarity=0.457  Sum_probs=45.5

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc-----c-hhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL-----E-AAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~-----d-AA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      ..+|.-|...+.|      |.++..+||.-+++|...     | -+.|+|...++.-++ .+|...+. .|-..||-.+|
T Consensus         8 ~~~L~pCl~y~~~------~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~-~LP~~Cgv~~p   79 (92)
T 2alg_A            8 SSSLAPCIPYVRG------GGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAA-ALPGKCGVSIP   79 (92)
T ss_dssp             HHHHGGGHHHHHH------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHH-HHHHHTTCCCS
T ss_pred             HHhccCcHHHHcC------CCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHH-HHHHHcCCCCC
Confidence            3467778887731      334556899999998632     2 268999877666664 45555555 57789999876


Q ss_pred             C
Q 035808          126 S  126 (131)
Q Consensus       126 ~  126 (131)
                      -
T Consensus        80 ~   80 (92)
T 2alg_A           80 Y   80 (92)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=88.95  E-value=0.063  Score=36.70  Aligned_cols=71  Identities=25%  Similarity=0.501  Sum_probs=44.6

Q ss_pred             CCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc---ch---hhhHHHHhhhcccccccccchhHHHHHHHcC
Q 035808           48 CPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL---EA---AVCLCTAIKANILGINLNVPVSLSLLLNFCG  121 (131)
Q Consensus        48 CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~---dA---A~CLCtaiKanvLGi~~~ipv~l~~lln~CG  121 (131)
                      |-....+|.-|.+.+.|-     +..+..+||.-+++|.+.   .+   +.|+|....+.-++ .+|...++ .|=..||
T Consensus         4 C~~v~~~L~pCl~y~~~~-----~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A~-~LP~~C~   76 (93)
T 1afh_A            4 CGQVASAIAPCISYARGQ-----GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAA-SIPSKCG   76 (93)
T ss_dssp             SHHHHHHHGGGHHHHTTS-----CCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHHH-HHHHHHH
T ss_pred             hHHHHHhccCcHHHHcCC-----CCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHHH-HHHHHcC
Confidence            433445677788877411     233556899999998532   22   68999755554453 34554555 4677899


Q ss_pred             CCCC
Q 035808          122 KKVP  125 (131)
Q Consensus       122 k~~P  125 (131)
                      -.+|
T Consensus        77 v~~p   80 (93)
T 1afh_A           77 VSIP   80 (93)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            8876

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=88.26  E-value=0.04  Score=37.55  Aligned_cols=66  Identities=24%  Similarity=0.450  Sum_probs=41.7

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc-----c-hhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL-----E-AAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~-----d-AA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      ..+|.-|.+.+.|      |.++..+||.-+++|...     | -+.|+|-.-.+..++ .+|...+. .|-..||-.+|
T Consensus         7 ~~~L~pCl~y~~~------~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~-~LP~~C~v~~p   78 (90)
T 1bwo_A            7 DSLVRPCLSYVQG------GPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNAR-SIPPKCGVNLP   78 (90)
T ss_dssp             HHHHGGGHHHHTT------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT-TCCHHHHH-THHHHHTCCCS
T ss_pred             HHhhcccHHHHcC------CCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC-CcCHHHHH-HHHHHcCCCCC
Confidence            3467778777631      334667899999998642     1 268999432233332 45555555 57788999876

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=83.41  E-value=0.16  Score=34.91  Aligned_cols=70  Identities=27%  Similarity=0.550  Sum_probs=44.9

Q ss_pred             ccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccc----hhhhHHHHhhhccccc-ccccchhHHHHHHHcCCCCC---
Q 035808           54 KLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLE----AAVCLCTAIKANILGI-NLNVPVSLSLLLNFCGKKVP---  125 (131)
Q Consensus        54 kL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~d----AA~CLCtaiKanvLGi-~~~ipv~l~~lln~CGk~~P---  125 (131)
                      .|.-|.+.+.|      |..+..+||.-+++|.+.-    .-.|+|..+|...-++ .+|...+. .|=..||-.+|   
T Consensus        10 ~L~pCl~Yv~g------~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~-~LP~~CgV~~p~~I   82 (93)
T 2ljo_A           10 DLSPCLTYLTG------GPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAA-ALPGKCGVNIPYKI   82 (93)
T ss_dssp             HHHHHHHHHTT------SSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHH-HHHHHHTCCCSSCC
T ss_pred             HHHhHHHHHcC------CCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHH-hhhHhcCCCCCCCC
Confidence            45556665531      3345678999888886532    2468888888655332 45554444 47778999988   


Q ss_pred             -CCCcc
Q 035808          126 -SGFQC  130 (131)
Q Consensus       126 -~gf~C  130 (131)
                       +.+.|
T Consensus        83 s~~~dC   88 (93)
T 2ljo_A           83 STTTNC   88 (93)
T ss_dssp             STTCCG
T ss_pred             CCCCCC
Confidence             55666

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=81.64  E-value=0.25  Score=33.61  Aligned_cols=65  Identities=28%  Similarity=0.540  Sum_probs=41.3

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccc------hhhhHHHHhhhcccccccccchhHHHHHHHcCCCCC
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLE------AAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVP  125 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~d------AA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P  125 (131)
                      ..+|.-|.+.+.|      |.++. +||.-|++|...-      -+.|+|-.--++.++ .+|...++ .|=..||-.+|
T Consensus         8 ~~~L~pCl~y~~~------~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~-~LP~~C~v~~p   78 (91)
T 1t12_A            8 TSNLAPCLAYLRN------TGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-GINLGKAA-GLPSTCGVNIP   78 (91)
T ss_dssp             HHHTHHHHHHHTT------SSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCT-TCCHHHHH-HHHHHTTCCCS
T ss_pred             HHhccCcHHHHcC------CCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccC-CcChhHHH-HHHHHcCCCCC
Confidence            4467778777631      22255 8999999986531      378999632233343 45555555 47788999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	131
d1hypa_	75	a.52.1.1 (A:) Soybean hydrophobic protein {Soybean	6e-25

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]} Length = 75

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 88.2 bits (219), Expect = 6e-25
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 13/85 (15%)

Query: 46  PTCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGI 105
           P+CP     L +C N+L   +           CC+LI GL D+EA VCLC  ++A  +  
Sbjct: 1   PSCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGI-- 48

Query: 106 NLNVPVSLSLLLNFCGKKVPSGFQC 130
            LN+  +L L+LN CG+  PS   C
Sbjct: 49  -LNLNRNLQLILNSCGRSYPSNATC 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	131
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	99.97
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	91.8
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	88.92
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	88.02
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	86.09

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.97  E-value=3.6e-32  Score=185.31  Aligned_cols=72  Identities=43%  Similarity=0.893  Sum_probs=65.7

Q ss_pred             CCCccccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCCC
Q 035808           47 TCPRDTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPS  126 (131)
Q Consensus        47 ~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P~  126 (131)
                      +||    |||+|+|||||++      ++.++||++|+||+|+|||+||||+|||+++   +|+||++++|||.|||++|+
T Consensus         2 tCP----Klg~C~nvLg~~~------~~~~~CC~Ll~GL~dleAAvCLCtaika~~l---lnvpv~l~llln~Cgk~~P~   68 (75)
T d1hypa_           2 SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPS   68 (75)
T ss_dssp             CSC----CCGGGGGGGGTCC------TTHHHHHHHHHTSCHHHHHHHHHHHHHHHTC---SCHHHHHHHHHHHTTCSSCC
T ss_pred             CCC----chhhHHHHhcCcc------CCCCCcchHHhhHHHHHHHHHHHHHHHHhhh---ccccchHHHHHHHcCCcCcC
Confidence            799    8999999998664      4568999999999999999999999999654   78999999999999999999


Q ss_pred             CCccC
Q 035808          127 GFQCA  131 (131)
Q Consensus       127 gf~C~  131 (131)
                      ||+||
T Consensus        69 gF~CP   73 (75)
T d1hypa_          69 NATCP   73 (75)
T ss_dssp             CCCCS
T ss_pred             CCcCC
Confidence            99996

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=91.80  E-value=0.039  Score=35.14  Aligned_cols=64  Identities=28%  Similarity=0.593  Sum_probs=49.3

Q ss_pred             cccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCCC
Q 035808           51 DTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPS  126 (131)
Q Consensus        51 d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P~  126 (131)
                      |..+|..|+..+-      -|.+++.+||+-+..     --.|||.-+|.-.+.--++-|- -+-+++.||..+|.
T Consensus         3 ~p~~L~~C~~Ai~------~g~~PS~~CC~kLke-----Q~~ClC~Y~kdP~~~~yv~spn-arkv~~aCgvp~P~   66 (67)
T d1tuka1           3 QASQLAVCASAIL------SGAKPSGECCGNLRA-----QQGCFCQYAKDPTYGQYIRSPH-ARDTLTSCGLAVPH   66 (67)
T ss_dssp             CGGGGGGGHHHHH------HCCCCCHHHHHHHHH-----HGGGHHHHTTCTTTHHHHTSHH-HHHHHHHTTCCCCC
T ss_pred             ChhhccccHHHHh------cCCCCcHHHHHHHHh-----cCCccceecCCccHHHHcCCHH-HHHHHHhcCCCCCC
Confidence            4457999999862      477888999998763     3579999999888764455554 46789999999885

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.92  E-value=0.022  Score=37.47  Aligned_cols=73  Identities=22%  Similarity=0.514  Sum_probs=48.3

Q ss_pred             ccccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc----chhhhHHHHhhhccccc-ccccchhHHHHHHHcCCCCC-
Q 035808           52 TLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL----EAAVCLCTAIKANILGI-NLNVPVSLSLLLNFCGKKVP-  125 (131)
Q Consensus        52 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~----dAA~CLCtaiKanvLGi-~~~ipv~l~~lln~CGk~~P-  125 (131)
                      ..+|.-|.+.+.|     -+..+.++||.-+++|.+.    +...|+|.-+|...-+. .+|... +..|=..||-.+| 
T Consensus         8 ~~~l~pCl~Yltg-----~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~r-a~~LP~~C~v~l~~   81 (93)
T d1fk5a_           8 ASAIAPCISYARG-----QGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGN-AASIPSKCGVSIPY   81 (93)
T ss_dssp             HHHHGGGHHHHTT-----CSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHH-HHHHHHHTTCCCSS
T ss_pred             HHHhhhhHHHHhC-----CCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHHH-HHhhhHhcCCCCCC
Confidence            4467777777632     1334567899999998774    33568888888765332 344443 3457778999887 


Q ss_pred             ---CCCcc
Q 035808          126 ---SGFQC  130 (131)
Q Consensus       126 ---~gf~C  130 (131)
                         +.+.|
T Consensus        82 pis~~~dC   89 (93)
T d1fk5a_          82 TISTSTDC   89 (93)
T ss_dssp             CCSTTCCG
T ss_pred             CCCCCCCC
Confidence               55666

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=88.02  E-value=0.023  Score=37.30  Aligned_cols=71  Identities=25%  Similarity=0.558  Sum_probs=47.8

Q ss_pred             cccchhhhhhhhhhhhhcCCCCCCCCcccccCCccc----chhhhHHHHhhhccccc-ccccchhHHHHHHHcCCCCC--
Q 035808           53 LKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDL----EAAVCLCTAIKANILGI-NLNVPVSLSLLLNFCGKKVP--  125 (131)
Q Consensus        53 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~----dAA~CLCtaiKanvLGi-~~~ipv~l~~lln~CGk~~P--  125 (131)
                      .+|.-|.+.+.|      |..+.++||.-+++|.+.    +.-.|+|..+|....++ .+|..-+ ..|=..||-++|  
T Consensus         8 ~~l~pCl~Yl~g------~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra-~~LP~~C~v~~p~p   80 (91)
T d1mida_           8 SKMKPCLTYVQG------GPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNA-ASIPSKCNVNVPYT   80 (91)
T ss_dssp             HHHGGGHHHHTT------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHH-HHHHHHTTCCCCSC
T ss_pred             HHHHhhHHHHcC------CCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHHHH-HhchHhcCCCCCCC
Confidence            356667776631      335668899999999764    23579999888765332 3455444 457778999988  


Q ss_pred             --CCCcc
Q 035808          126 --SGFQC  130 (131)
Q Consensus       126 --~gf~C  130 (131)
                        +.+.|
T Consensus        81 is~~~dC   87 (91)
T d1mida_          81 ISPDIDC   87 (91)
T ss_dssp             CCTTCCG
T ss_pred             CCCCCCC
Confidence              66666

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=86.09  E-value=0.037  Score=35.47  Aligned_cols=64  Identities=27%  Similarity=0.596  Sum_probs=48.6

Q ss_pred             cccccchhhhhhhhhhhhhcCCCCCCCCcccccCCcccchhhhHHHHhhhcccccccccchhHHHHHHHcCCCCCC
Q 035808           51 DTLKLGVCANVLNDLVHLVVGTPPKTPCCSLIKGLVDLEAAVCLCTAIKANILGINLNVPVSLSLLLNFCGKKVPS  126 (131)
Q Consensus        51 d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d~dAA~CLCtaiKanvLGi~~~ipv~l~~lln~CGk~~P~  126 (131)
                      |..+|..|+..+-      -|.+++..||+-+..     -.-|||.=+|.-.++--|+-|- -+-+++.||..+|.
T Consensus         4 ~p~~L~~C~~ai~------~g~~PS~~CC~kLke-----Q~~ClC~Y~k~P~~~~yv~spn-arkv~~aCgvp~P~   67 (69)
T d1l6ha_           4 NAGQLTVCTGAIA------GGARPTAACCSSLRA-----QQGCFCQFAKDPRYGRYVNSPN-ARKAVSSCGIALPT   67 (69)
T ss_dssp             TTTTHHHHHHHHT------TCCSTTHHHHHHHHH-----HHHHHHHHTTCSSHHHHTTTTT-GGGCCCCCSSCSCC
T ss_pred             ChhhccccHHHHh------CCCCCcHHHHHHHHh-----cCCccceeccCccHHHHcCCHH-HHHHHHhcCCCCCC
Confidence            3457999998762      377888899998764     3579999999888764455554 46788899999885