Citrus Sinensis ID: 035894

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------
Protein Sequence
MKTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccEEEEccccccccEEEccccEEEEccccccEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcccccccccccccccHHccccccccccccccccEEEEcccccccEcEccccEEEEEcccccccEEEEEccccc
Coil and Loop (DISEMBL)
MKTSLLIIFFFLAltlspsfglpsnaggsrkgnhhlklqlpagvvgpeslafdcngkgpyagvsdgrilkwqdsklgwtefasttpfr
Flexible Loop (DISEMBL)
MKTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGpyagvsdgrilkwqdsklgwtefasttpfr
Low Complexity Region (SEG)
MKtslliiffflaltlsPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR
Disordered region (IsUnstruct)
****LLIIFFFLALTLSPSFGL************HLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEF*******
Disordered Region (DISOPRED)
***SLLIIFFFLALTLSPSFGL***************LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFAST****
Disordered Region (DISEMBL)
MKTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR
Disordered Region (DISPRO)
*KTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT***
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	88	2.2.26 [Sep-21-2011]
P92976	329	Strictosidine synthase 3	no	no	0.613	0.164	0.454	2e-05
P94111	335	Strictosidine synthase 1	no	no	0.545	0.143	0.489	0.0001
P18417	352	Strictosidine synthase OS	N/A	no	0.477	0.119	0.404	0.0006

>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 31 KGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
          K +   KL +P    GPE+ AFD  GKG Y GV+ G+ILK+   K G+ +FA  T
Sbjct: 25 KKSSFQKLPVPGNRTGPEAFAFDSTGKGFYTGVTGGKILKYLPKK-GYVDFAQIT 78

Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 3EC: .EC: 3EC: .EC: 2

>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 37 KLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
          KL +P    GPE+ AFD  GKG Y GVS G+ILK+   + G+ +FA  T
Sbjct: 29 KLPVPETRSGPEAFAFDSTGKGFYTGVSGGKILKYL-PETGYVDFAQIT 76

Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2

 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 46 GPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
           P +  FD   KG Y  V DGR++K++    G+T+FA  +PF
Sbjct: 46 APNAFTFDSTDKGFYTSVQDGRVIKYEGPNSGFTDFAYASPF 87

Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis.

Catharanthus roseus (taxid: 4058)

EC: 4

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
297742774	653	unnamed protein product [Vitis vinifera]	0.920	0.124	0.556	3e-18
359484044	359	PREDICTED: strictosidine synthase 1-like	0.738	0.181	0.657	8e-18
296080853	312	unnamed protein product [Vitis vinifera]	0.579	0.163	0.764	1e-17
296085255	315	unnamed protein product [Vitis vinifera]	0.579	0.161	0.764	1e-17
296085256	322	unnamed protein product [Vitis vinifera]	0.579	0.158	0.745	4e-17
296090369	291	unnamed protein product [Vitis vinifera]	0.693	0.209	0.672	4e-17
359484190	325	PREDICTED: strictosidine synthase 1-like	0.602	0.163	0.716	5e-17
359497069	322	PREDICTED: strictosidine synthase 1-like	0.579	0.158	0.745	1e-16
296085258	343	unnamed protein product [Vitis vinifera]	0.681	0.174	0.666	2e-16
296090370	322	unnamed protein product [Vitis vinifera]	0.693	0.189	0.655	4e-16

>gi|297742774|emb|CBI35408.3| unnamed protein product [Vitis vinifera]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 7/88 (7%)

Query: 1  MKTSLLIIFFFLALTLSPSFGLPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPY 60
          MK S   IF F+ ++L   FG  +    S +   +  L+LP+GV GPES+AFDCNG GPY
Sbjct: 1  MKLSQFFIFSFILISL---FGCVN----SHQALKYNTLELPSGVSGPESIAFDCNGDGPY 53

Query: 61 AGVSDGRILKWQDSKLGWTEFASTTPFR 88
           G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 54 TGISDGRILKWQGSKHGWKEFAITSPFR 81

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484044|ref|XP_002275622.2| PREDICTED: strictosidine synthase 1-like [Vitis vinifera]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 5/70 (7%)

Query: 22  LPSNAGGSRKGNHHLK---LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGW 78
           L SN G  R   H LK   L+LP+GV GPES+AFDCNG GPY G+SDG+ILKWQ SK GW
Sbjct: 51  LCSNVGEERL--HALKYNTLELPSGVSGPESIAFDCNGDGPYTGISDGKILKWQGSKHGW 108

Query: 79  TEFASTTPFR 88
            EFA T+PFR
Sbjct: 109 KEFAITSPFR 118

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296080853|emb|CBI18783.3| unnamed protein product [Vitis vinifera]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/51 (76%), Positives = 44/51 (86%)

Query: 38 LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
          L+LP+GV GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 31 LELPSGVFGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPFR 81

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085255|emb|CBI28987.3| unnamed protein product [Vitis vinifera]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/51 (76%), Positives = 44/51 (86%)

Query: 38 LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
          L+LP+GV GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 24 LELPSGVSGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPFR 74

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085256|emb|CBI28988.3| unnamed protein product [Vitis vinifera]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/51 (74%), Positives = 44/51 (86%)

Query: 38 LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
          L+LP+GV GPES+AFDCNG GPY G+SDG+ILKWQ SK GW EFA T+PFR
Sbjct: 31 LELPSGVSGPESIAFDCNGDGPYTGISDGKILKWQGSKHGWKEFAITSPFR 81

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090369|emb|CBI40188.3| unnamed protein product [Vitis vinifera]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 48/61 (78%)

Query: 28 GSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
           S +   + KL+LP+GV GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PF
Sbjct: 38 NSHQALKYNKLKLPSGVSGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPF 97

Query: 88 R 88
          R
Sbjct: 98 R 98

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484190|ref|XP_002274853.2| PREDICTED: strictosidine synthase 1-like [Vitis vinifera]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/53 (71%), Positives = 45/53 (84%)

Query: 36 LKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
          ++L+LP+ V GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 32 MRLELPSRVSGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPFR 84

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497069|ref|XP_003635414.1| PREDICTED: strictosidine synthase 1-like [Vitis vinifera]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/51 (74%), Positives = 43/51 (84%)

Query: 38 LQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
          L+LP+GV GPES+AFDCN  GPY G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 31 LELPSGVSGPESIAFDCNRDGPYTGISDGRILKWQGSKHGWKEFAITSPFR 81

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085258|emb|CBI28990.3| unnamed protein product [Vitis vinifera]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 47/60 (78%)

Query: 29  SRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
           S +   + KL+LP+ V GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PFR
Sbjct: 43  SHQALKYNKLELPSRVSGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPFR 102

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090370|emb|CBI40189.3| unnamed protein product [Vitis vinifera]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 47/61 (77%)

Query: 28 GSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
           S +   + KL+LP+ V GPES+AFDCNG GPY G+SDGRILKWQ SK GW EFA T+PF
Sbjct: 21 NSHQALKYNKLKLPSWVSGPESIAFDCNGDGPYTGISDGRILKWQGSKHGWKEFAITSPF 80

Query: 88 R 88
          R
Sbjct: 81 R 81

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
TAIR|locus:2080660	376	AT3G57010 [Arabidopsis thalian	0.738	0.172	0.515	1.1e-12
TAIR|locus:2080565	370	AT3G57020 [Arabidopsis thalian	0.75	0.178	0.492	6.4e-12
TAIR|locus:2080575	374	AT3G57030 [Arabidopsis thalian	0.75	0.176	0.515	6.5e-12
TAIR|locus:2097488	403	LAP3 "LESS ADHERENT POLLEN 3"	0.636	0.138	0.491	3.4e-10
TAIR|locus:2040312	376	SSL2 "strictosidine synthase-l	0.738	0.172	0.430	4.7e-09
TAIR|locus:2201841	390	SSL3 "strictosidine synthase-l	0.454	0.102	0.595	2.9e-08
TAIR|locus:2040297	394	SSL1 "strictosidine synthase-l	0.670	0.149	0.467	6.3e-08
TAIR|locus:504956439	395	AT5G22020 [Arabidopsis thalian	0.488	0.108	0.533	1.7e-07
TAIR|locus:2031511	329	SS3 "strictosidine synthase 3"	0.636	0.170	0.456	7.1e-07
TAIR|locus:2031486	335	SS2 "strictosidine synthase 2"	0.545	0.143	0.489	9e-06

TAIR|locus:2080660 AT3G57010 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 34/66 (51%), Positives = 43/66 (65%)

Query:    23 PSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFA 82
             P N  G++      K  +P  V GPESL FD  G+GPY GV+DGRILKW+  +LGW +FA
Sbjct:    32 PDNLKGTKHVLQDAKT-IPLPVDGPESLEFDPQGEGPYVGVTDGRILKWRGEELGWVDFA 90

Query:    83 STTPFR 88
              T+P R
Sbjct:    91 YTSPHR 96

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2080565 AT3G57020 [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 33/67 (49%), Positives = 42/67 (62%)

Query:    22 LPSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEF 81
             +P N  G++      K  +P  V GPES+ FD  G+GPYA V DGRILKW+   LGW +F
Sbjct:    30 VPENLEGAKNVLTMAKT-IPIPVAGPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDF 88

Query:    82 ASTTPFR 88
             A T+P R
Sbjct:    89 AYTSPHR 95

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2080575 AT3G57030 [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 34/66 (51%), Positives = 41/66 (62%)

Query:    23 PSNAGGSRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFA 82
             P    GSR      K+    G  GPES+AFD  G+GPY GVSDGRILKW+   LGW++FA
Sbjct:    33 PPEISGSRDVFPSAKVVNLTGASGPESIAFDPAGEGPYVGVSDGRILKWRGEPLGWSDFA 92

Query:    83 STTPFR 88
              T+  R
Sbjct:    93 HTSSNR 98

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2097488 LAP3 "LESS ADHERENT POLLEN 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    29 SRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
             SR GNH  KL+    V GPESL FD  G+GPY G++DGR+++W    +GW  F+  T
Sbjct:    68 SRLGNHG-KLEFVDQVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVT 123

GO:0005739 "mitochondrion" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0010584 "pollen exine formation" evidence=RCA;IMP

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2040312 SSL2 "strictosidine synthase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 31/72 (43%), Positives = 39/72 (54%)

Query:    24 SNAGGSRKGNHHLKLQLP-------AGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKL 76
             S  G    G   L +Q+P        G +GPES  FD  G GPY G+SDGRI+KW  ++ 
Sbjct:    22 SGEGPKHGGESMLTVQIPDFRLIPTTGALGPESFVFDFFGDGPYTGLSDGRIVKWLANES 81

Query:    77 GWTEFASTTPFR 88
              W +FA TT  R
Sbjct:    82 RWIDFAVTTSAR 93

GO:0005576 "extracellular region" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2201841 SSL3 "strictosidine synthase-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 25/42 (59%), Positives = 32/42 (76%)

Query:    44 VVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
             V GPES+AFD  G+GPY GV+DGRIL W  ++  WT+FA T+
Sbjct:    67 VQGPESIAFDPQGRGPYTGVADGRILFWNGTR--WTDFAYTS 106

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2040297 SSL1 "strictosidine synthase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 29/62 (46%), Positives = 36/62 (58%)

Query:    28 GSRKGNHHLKLQLPA-GVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTP 86
             G  K  +H +   P+ G  G   L  D  G+GPY GV+DGRILKW    LGW EFA ++P
Sbjct:    61 GLEKRPNHSEDNPPSRGWTGEPGL--DPRGEGPYVGVTDGRILKWSGEDLGWIEFAYSSP 118

Query:    87 FR 88
              R
Sbjct:   119 HR 120

GO:0005576 "extracellular region" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

TAIR|locus:504956439 AT5G22020 [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 24/45 (53%), Positives = 31/45 (68%)

Query:    44 VVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPFR 88
             + GPES+AFD  G+GPY GV+DGR+L W   K  W +FA T+  R
Sbjct:    73 IQGPESVAFDSLGRGPYTGVADGRVLFWDGEK--WIDFAYTSSNR 115

GO:0005576 "extracellular region" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009821 "alkaloid biosynthetic process" evidence=ISS

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2031511 SS3 "strictosidine synthase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query:    29 SRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
             S K +   KL +P    GPE+ AFD  GKG Y GV+ G+ILK+   K G+ +FA  T
Sbjct:    23 STKKSSFQKLPVPGNRTGPEAFAFDSTGKGFYTGVTGGKILKYLPKK-GYVDFAQIT 78

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2031486 SS2 "strictosidine synthase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query:    37 KLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT 85
             KL +P    GPE+ AFD  GKG Y GVS G+ILK+   + G+ +FA  T
Sbjct:    29 KLPVPETRSGPEAFAFDSTGKGFYTGVSGGKILKYLP-ETGYVDFAQIT 76

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016844 "strictosidine synthase activity" evidence=IEA;TAS

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	88
KOG1520	376	consensus Predicted alkaloid synthase/Surface muci	99.32
PF13449	326	Phytase-like: Esterase-like activity of phytase	93.28
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	92.96
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	91.74
PRK13684	334	Ycf48-like protein; Provisional	91.6
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	91.1
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	90.87
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	86.9
COG5341	132	Uncharacterized protein conserved in bacteria [Fun	84.65
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	82.59
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	82.05
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	81.88
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	81.47
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	80.07

>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]

Probab=99.32  E-value=3.8e-12  Score=103.08  Aligned_cols=47  Identities=53%  Similarity=0.962  Sum_probs=43.8

Q ss_pred             CCccCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEEEEC--CCCC
Q 035894           42 AGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFAST--TPFR   88 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~FA~T--s~~r   88 (88)
                      ..+.|||+++||+.|+|||+|++||||++|.+...||++||++  |+||
T Consensus        51 ~~~~g~E~~~fd~~~~gp~~~v~dg~il~~~g~~~Gwv~~~~~~~s~~~   99 (376)
T KOG1520|consen   51 NHLTGPESLLFDPQGGGPYTGVVDGRILKYTGNDDGWVKFADTKDSTNR   99 (376)
T ss_pred             cccCChhhheecccCCCceEEEECCceEEEeccCceEEEEEeccccccc
Confidence            4589999999999999999999999999999988899999999  7765

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=93.28  E-value=0.18  Score=38.96  Aligned_cols=42  Identities=26%  Similarity=0.373  Sum_probs=33.6

Q ss_pred             cCCceEEeccCCCcceEEeecc----------------eEEEEeCCCC--CeEEEEECCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDG----------------RILKWQDSKL--GWTEFASTTP   86 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DG----------------RIlR~~~~~~--gw~~FA~Ts~   86 (88)
                      .|.|++|+.++|+.+|+.+...                ||++++....  .|.+|+|..+
T Consensus       147 ~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld  206 (326)
T PF13449_consen  147 RGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLD  206 (326)
T ss_pred             CCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCC
Confidence            6999999999999899986554                7889987643  4888887643

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=92.96  E-value=0.36  Score=37.62  Aligned_cols=49  Identities=22%  Similarity=0.261  Sum_probs=34.5

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEe------------ecc-eEEEEeC---CCC--CeEEEEEC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGV------------SDG-RILKWQD---SKL--GWTEFAST   84 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv------------~DG-RIlR~~~---~~~--gw~~FA~T   84 (88)
                      ++.+.-+..+.-|+.||+|++|+ +|.+-            ..| ||++++.   ++.  .++.||..
T Consensus         4 ~~l~A~~p~~~~P~~ia~d~~G~-l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~   70 (367)
T TIGR02604         4 VTLFAAEPLLRNPIAVCFDERGR-LWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE   70 (367)
T ss_pred             EEEEECCCccCCCceeeECCCCC-EEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC
Confidence            34444333578999999999999 99985            345 9999975   222  36777753

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=91.74  E-value=0.33  Score=25.33  Aligned_cols=28  Identities=32%  Similarity=0.491  Sum_probs=24.8

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEe
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQ   72 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~   72 (88)
                      ..-.++++.+++.-+.||..||.|.-|+
T Consensus        12 ~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen   12 SSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             SSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4567899999999899999999999885

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PRK13684 Ycf48-like protein; Provisional

Probab=91.60  E-value=1.3  Score=34.54  Aligned_cols=46  Identities=24%  Similarity=0.328  Sum_probs=34.2

Q ss_pred             ceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEE
Q 035894           34 HHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        34 ~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~F   81 (88)
                      ..++..+|. ..-.-+|+|..+.+|.+.| ++|.|+|=...++.|+..
T Consensus        36 ~W~~~~~~~-~~~l~~v~F~d~~~g~avG-~~G~il~T~DgG~tW~~~   81 (334)
T PRK13684         36 PWQVIDLPT-EANLLDIAFTDPNHGWLVG-SNRTLLETNDGGETWEER   81 (334)
T ss_pred             CcEEEecCC-CCceEEEEEeCCCcEEEEE-CCCEEEEEcCCCCCceEC
Confidence            356666654 3567889999888866666 689999987777789864

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=91.10  E-value=0.46  Score=34.09  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=26.6

Q ss_pred             CceEEeccCCCcceEEe-ecceEEEEeCCCCCeE
Q 035894           47 PESLAFDCNGKGPYAGV-SDGRILKWQDSKLGWT   79 (88)
Q Consensus        47 PESiAfD~~G~GpYTGv-~DGRIlR~~~~~~gw~   79 (88)
                      |..+++|++|+ +|.+. ..|+|++++++++-..
T Consensus       186 pDG~~vD~~G~-l~va~~~~~~I~~~~p~G~~~~  218 (246)
T PF08450_consen  186 PDGLAVDSDGN-LWVADWGGGRIVVFDPDGKLLR  218 (246)
T ss_dssp             EEEEEEBTTS--EEEEEETTTEEEEEETTSCEEE
T ss_pred             CCcceEcCCCC-EEEEEcCCCEEEEECCCccEEE
Confidence            99999999999 99986 4899999999875333

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=90.87  E-value=0.47  Score=36.96  Aligned_cols=39  Identities=18%  Similarity=0.217  Sum_probs=32.2

Q ss_pred             cCCceEEeccCCCcceEEeec--------------------ceEEEEeCCCCCeEEEEEC
Q 035894           45 VGPESLAFDCNGKGPYAGVSD--------------------GRILKWQDSKLGWTEFAST   84 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~D--------------------GRIlR~~~~~~gw~~FA~T   84 (88)
                      .+|-.+++++||. +|....+                    |+|+|+++++...+.+|.-
T Consensus       124 ~~~~~l~~gpDG~-LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G  182 (367)
T TIGR02604       124 HSLNSLAWGPDGW-LYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHG  182 (367)
T ss_pred             ccccCceECCCCC-EEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecC
Confidence            5688999999999 9986662                    7899999998778877643

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=86.90  E-value=0.89  Score=23.73  Aligned_cols=25  Identities=28%  Similarity=0.418  Sum_probs=18.0

Q ss_pred             cCCceEEeccCCCcceEEee-cceEEE
Q 035894           45 VGPESLAFDCNGKGPYAGVS-DGRILK   70 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~-DGRIlR   70 (88)
                      ..|.++|+|++|+ +|..-. ..||.+
T Consensus         2 ~~P~gvav~~~g~-i~VaD~~n~rV~v   27 (28)
T PF01436_consen    2 NYPHGVAVDSDGN-IYVADSGNHRVQV   27 (28)
T ss_dssp             SSEEEEEEETTSE-EEEEECCCTEEEE
T ss_pred             cCCcEEEEeCCCC-EEEEECCCCEEEE
Confidence            4689999999998 887643 445544

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>COG5341 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.65  E-value=5.2  Score=29.01  Aligned_cols=64  Identities=27%  Similarity=0.342  Sum_probs=38.8

Q ss_pred             hhhHHHHHHHHhcCCccccCCCCCC-----cccCCceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeC
Q 035894            4 SLLIIFFFLALTLSPSFGLPSNAGG-----SRKGNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQD   73 (88)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~   73 (88)
                      .+|+|++|+.|.+   |.+.++..+     +.++.....+++-   .|||.+..-..|++--+-=-||.=+|...
T Consensus        17 v~LiI~sf~~i~~---f~~a~~~kG~~A~i~v~Gk~~r~i~l~---Kg~~t~~v~~~~g~~n~vev~g~~IRV~e   85 (132)
T COG5341          17 VMLIILSFLPILL---FSLAKAKKGAVAEISVDGKVIRTIPLT---KGNETFDVKENGGFYNKVEVKGNRIRVVE   85 (132)
T ss_pred             hHHHHHHHHHHHh---heeeeccCCcEEEEEECCEEEEEEEcc---cCCccEEEEcCCCceEEEEEcCCEEEEEe
Confidence            5788999998877   555533222     3333335567773   79999998887773332333444445443

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=82.59  E-value=2.1  Score=32.87  Aligned_cols=36  Identities=28%  Similarity=0.466  Sum_probs=21.2

Q ss_pred             eeEeeCCCC-------ccCCceEEeccCCCcceEEeecceEEEE
Q 035894           35 HLKLQLPAG-------VVGPESLAFDCNGKGPYAGVSDGRILKW   71 (88)
Q Consensus        35 ~~~l~l~~~-------v~GPESiAfD~~G~GpYTGv~DGRIlR~   71 (88)
                      ...+.|..+       +..||-||||++|. +|-...-.+-+|+
T Consensus       205 ~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~-LYIvsEpNlfy~f  247 (248)
T PF06977_consen  205 VSSLSLDRGFHGLSKDIPQPEGIAFDPDGN-LYIVSEPNLFYRF  247 (248)
T ss_dssp             EEEEE-STTGGG-SS---SEEEEEE-TT---EEEEETTTEEEEE
T ss_pred             EEEEEeCCcccCcccccCCccEEEECCCCC-EEEEcCCceEEEe
Confidence            445556543       34599999999998 9987766655554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=82.05  E-value=2.2  Score=33.08  Aligned_cols=30  Identities=27%  Similarity=0.367  Sum_probs=26.5

Q ss_pred             CCceEEeccCCCcceEEeecceEEEEeCCCC
Q 035894           46 GPESLAFDCNGKGPYAGVSDGRILKWQDSKL   76 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~   76 (88)
                      -|-+|||.|||+ +|..-..|+|+++..++.
T Consensus         3 ~P~~~a~~pdG~-l~v~e~~G~i~~~~~~g~   32 (331)
T PF07995_consen    3 NPRSMAFLPDGR-LLVAERSGRIWVVDKDGS   32 (331)
T ss_dssp             SEEEEEEETTSC-EEEEETTTEEEEEETTTE
T ss_pred             CceEEEEeCCCc-EEEEeCCceEEEEeCCCc
Confidence            478999999999 999999999999996553

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=81.88  E-value=2.7  Score=29.16  Aligned_cols=31  Identities=13%  Similarity=-0.069  Sum_probs=26.7

Q ss_pred             cCCceEEeccCCCcceEEe-ecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGV-SDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~   75 (88)
                      ..|.+++|+++|+-+|++. .+|.|..|+...
T Consensus       249 ~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~  280 (300)
T TIGR03866       249 QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA  280 (300)
T ss_pred             CCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence            4799999999999899875 589999999865

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=81.47  E-value=1.5  Score=31.42  Aligned_cols=29  Identities=24%  Similarity=0.357  Sum_probs=17.8

Q ss_pred             CceEEecc-CCCcceEE-eecceEEEEeCCCC
Q 035894           47 PESLAFDC-NGKGPYAG-VSDGRILKWQDSKL   76 (88)
Q Consensus        47 PESiAfD~-~G~GpYTG-v~DGRIlR~~~~~~   76 (88)
                      ||+.++|+ +|. +|-. ...|+|+||++++.
T Consensus         2 ~Egp~~d~~~g~-l~~~D~~~~~i~~~~~~~~   32 (246)
T PF08450_consen    2 GEGPVWDPRDGR-LYWVDIPGGRIYRVDPDTG   32 (246)
T ss_dssp             EEEEEEETTTTE-EEEEETTTTEEEEEETTTT
T ss_pred             CcceEEECCCCE-EEEEEcCCCEEEEEECCCC
Confidence            57777776 444 5443 45677777776553

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=80.07  E-value=1.2  Score=34.53  Aligned_cols=23  Identities=30%  Similarity=0.577  Sum_probs=20.5

Q ss_pred             CceEEeccCCCcceEEee-cceEEE
Q 035894           47 PESLAFDCNGKGPYAGVS-DGRILK   70 (88)
Q Consensus        47 PESiAfD~~G~GpYTGv~-DGRIlR   70 (88)
                      |-+|++++||. +|-... +|+|+|
T Consensus       308 ~~~v~~~pDG~-Lyv~~d~~G~iyR  331 (331)
T PF07995_consen  308 PRDVAQGPDGA-LYVSDDSDGKIYR  331 (331)
T ss_dssp             EEEEEEETTSE-EEEEE-TTTTEEE
T ss_pred             ceEEEEcCCCe-EEEEECCCCeEeC
Confidence            78999999999 999877 999998

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	88
2fp8_A	322	Structure Of Strictosidine Synthase, The Biosynthet		1e-04
2v91_A	302	Structure Of Strictosidine Synthase In Complex With		1e-04
2fpb_A	322	Structure Of Strictosidine Synthase, The Biosynthet		3e-04

>pdb|2FP8|A Chain A, Structure Of Strictosidine Synthase, The Biosynthetic Entry To The Monoterpenoid Indole Alkaloid Family Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 37 KLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
          ++ + A    P S  FD   KG Y  V DGR++K++    G+ +FA  +P+
Sbjct: 11 EILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPY 61

>pdb|2V91|A Chain A, Structure Of Strictosidine Synthase In Complex With Strictosidine Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 46 GPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
           P S  FD   KG Y  V DGR++K++    G+ +FA  +P+
Sbjct: 11 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPY 52

>pdb|2FPB|A Chain A, Structure Of Strictosidine Synthase, The Biosynthetic Entry To The Monoterpenoid Indole Alkaloid Family Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 37 KLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
          ++ + A    P S  FD   KG Y  V DGR+ K++    G+ +FA  +P+
Sbjct: 11 EILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVXKYEGPNSGFVDFAYASPY 61

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	88
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	9e-14

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Length = 322

 Score = 63.6 bits (154), Expect = 9e-14
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 37 KLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTTPF 87
          ++ + A    P S  FD   KG Y  V DGR++K++    G+ +FA  +P+
Sbjct: 11 EILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPY 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	88
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.26
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.18
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	96.68
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	96.52
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	96.41
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	96.27
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	95.8
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.56
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.56
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.35
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	95.29
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	95.1
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	94.96
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	94.8
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.77
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	94.72
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	94.6
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	94.59
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	94.58
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	94.58
2p4o_A	306	Hypothetical protein; putative lactonase, structur	94.17
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	93.91
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.76
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	93.19
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	93.06
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	92.74
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	92.49
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	92.36
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	92.26
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	92.15
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	92.12
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	91.87
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	91.29
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	90.89
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	90.72
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	90.68
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	90.59
2p4o_A	306	Hypothetical protein; putative lactonase, structur	90.22
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	90.02
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	89.98
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	89.24
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	88.76
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	88.33
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	88.32
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	88.24
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	87.56
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	87.46
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	87.26
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	87.04
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	86.53
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	86.14
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	85.76
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	85.57
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	85.18
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	84.98
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	84.48
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	84.4
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	84.25
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	84.13
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	84.09
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	83.66
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	83.63
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	83.53
2qe8_A	343	Uncharacterized protein; structural genomics, join	83.49
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	83.42
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	83.24
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	82.73
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	82.55
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	82.4
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	82.17
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	81.28
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	81.11
3v65_B	386	Low-density lipoprotein receptor-related protein;	80.73
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	80.52
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	80.27
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	80.06

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.26  E-value=1.7e-06  Score=61.57  Aligned_cols=54  Identities=30%  Similarity=0.582  Sum_probs=43.9

Q ss_pred             CCceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEEEECC
Q 035894           32 GNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFASTT   85 (88)
Q Consensus        32 ~~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~FA~Ts   85 (88)
                      .+.++++.+|++..+||++++|++|+-+|++..+|+|+||+.++..++.|+..+
T Consensus         6 ~~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~   59 (322)
T 2fp8_A            6 SPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYAS   59 (322)
T ss_dssp             ----CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESC
T ss_pred             CCccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEeccc
Confidence            355777889888899999999999877999999999999998776788887544

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.18  E-value=0.00075  Score=52.06  Aligned_cols=47  Identities=19%  Similarity=0.164  Sum_probs=34.7

Q ss_pred             ceeEeeCCCCccCCceEEeccCCCcceEEe-------------ecceEEEEeCCC--CCeEEEEE
Q 035894           34 HHLKLQLPAGVVGPESLAFDCNGKGPYAGV-------------SDGRILKWQDSK--LGWTEFAS   83 (88)
Q Consensus        34 ~~~~l~l~~~v~GPESiAfD~~G~GpYTGv-------------~DGRIlR~~~~~--~gw~~FA~   83 (88)
                      ..+.|  ++...|||||+.+++|. .|++.             .+|+|++++.++  ...++.+.
T Consensus        41 ~C~~i--~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~  102 (355)
T 3sre_A           41 NCNLV--KGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEI  102 (355)
T ss_dssp             CEEEC--TTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEE
T ss_pred             CCEEe--CCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEc
Confidence            45554  54357999999999999 99997             799999999863  23444444

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=96.68  E-value=0.003  Score=42.97  Aligned_cols=41  Identities=27%  Similarity=0.281  Sum_probs=33.0

Q ss_pred             CCCccCCceEEeccCCCcceEE--------eecceEEEEeCCCCCeEEEE
Q 035894           41 PAGVVGPESLAFDCNGKGPYAG--------VSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        41 ~~~v~GPESiAfD~~G~GpYTG--------v~DGRIlR~~~~~~gw~~FA   82 (88)
                      .++..+||++++|++|+ +|.+        ..+|+|.+|+.....+..+.
T Consensus        14 ~~~~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~   62 (314)
T 1pjx_A           14 TEDIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC   62 (314)
T ss_dssp             ECCCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEE
T ss_pred             hccCCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEE
Confidence            34678999999999998 8877        88999999997555566554

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=96.52  E-value=0.0036  Score=46.43  Aligned_cols=45  Identities=22%  Similarity=0.212  Sum_probs=34.4

Q ss_pred             CceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEEE
Q 035894           33 NHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        33 ~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~FA   82 (88)
                      -.++.+.-  ++..|+++||+++|+ +|..-.+|+|.+++ ++ ..+.++
T Consensus        21 ~~~~~va~--~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g-~~~~~~   65 (352)
T 2ism_A           21 LRVEEVVG--GLEVPWALAFLPDGG-MLIAERPGRIRLFR-EG-RLSTYA   65 (352)
T ss_dssp             CCEEEEEC--CCSCEEEEEECTTSC-EEEEETTTEEEEEE-TT-EEEEEE
T ss_pred             cEEEEEEC--CCCCceEEEEcCCCe-EEEEeCCCeEEEEE-CC-CccEee
Confidence            34555543  467999999999999 99999999999998 44 244444

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=96.41  E-value=0.0096  Score=39.74  Aligned_cols=46  Identities=20%  Similarity=0.157  Sum_probs=37.4

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEEE
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~FA   82 (88)
                      +..++++.+...|.++++|++|+ +|.+.. +|+|.+|+.+ ..+..+.
T Consensus         5 ~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~   51 (299)
T 2z2n_A            5 LQELNLTNQDTGPYGITVSDKGK-VWITQHKANMISCINLD-GKITEYP   51 (299)
T ss_dssp             EEEEECCSSSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEE
T ss_pred             EEEEcCCCcCCCccceEECCCCC-EEEEecCCCcEEEEcCC-CCeEEec
Confidence            45667776667999999999999 998887 7999999987 4566655

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=96.27  E-value=0.012  Score=39.33  Aligned_cols=47  Identities=19%  Similarity=0.188  Sum_probs=37.8

Q ss_pred             ceeEeeCCCCccCCceEEeccCCCcceEEe-ecceEEEEeCCCCCeEEEE
Q 035894           34 HHLKLQLPAGVVGPESLAFDCNGKGPYAGV-SDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        34 ~~~~l~l~~~v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~gw~~FA   82 (88)
                      .++.+.+|.+...|+++++|++|+ +|.+. .+|+|.+|+.+ ..+..+.
T Consensus         9 ~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~   56 (300)
T 2qc5_A            9 YLEEFNLSIPDSGPYGITSSEDGK-VWFTQHKANKISSLDQS-GRIKEFE   56 (300)
T ss_dssp             EEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEE
T ss_pred             eEEEEecCCCCCCcceeeECCCCC-EEEEcCCCCeEEEECCC-CceEEEE
Confidence            466778887778999999999999 88887 47999999987 4555543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=95.80  E-value=0.021  Score=39.50  Aligned_cols=40  Identities=23%  Similarity=0.243  Sum_probs=32.1

Q ss_pred             CCccCCceEEeccCCCcce-EEeecceEEEEeCCCCCeEEEE
Q 035894           42 AGVVGPESLAFDCNGKGPY-AGVSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpY-TGv~DGRIlR~~~~~~gw~~FA   82 (88)
                      +...+||++++|++|+ +| ++..+|+|.+|+.++..+..+.
T Consensus        42 ~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~   82 (333)
T 2dg1_A           42 KKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPF   82 (333)
T ss_dssp             SSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEE
T ss_pred             ccCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEe
Confidence            3456899999999999 87 6788999999998765555543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.56  E-value=0.033  Score=41.53  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=28.3

Q ss_pred             CccCCceEEeccCCCcceEEeec--------------ceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD--------------GRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D--------------GRIlR~~~~~~   76 (88)
                      ..+.|..++|++||. +|....|              |+|+|++++++
T Consensus       133 ~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~  179 (354)
T 3a9g_A          133 YIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGR  179 (354)
T ss_dssp             SSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred             CCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence            346789999999999 9998765              89999998875

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.56  E-value=0.026  Score=41.73  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=27.6

Q ss_pred             CccCCceEEeccCCCcceEEeec--------------ceEEEEeCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD--------------GRILKWQDSK   75 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D--------------GRIlR~~~~~   75 (88)
                      ..+.|..++||+||. +|.+..|              |+|+|+++++
T Consensus       133 ~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG  178 (352)
T 2ism_A          133 GLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEG  178 (352)
T ss_dssp             CCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred             CCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence            456789999999998 9999754              8999999876

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.35  E-value=0.021  Score=42.54  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=34.6

Q ss_pred             ceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEEE
Q 035894           34 HHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        34 ~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~FA   82 (88)
                      .++.+.-  ++..|+++||+++|+ +|..-.+|||++++.++.  +.++
T Consensus        20 ~~~~va~--~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~--~~~~   63 (354)
T 3a9g_A           20 KISEVAS--DLEVPWSIAPLGGGR-YLVTERPGRLVLISPSGK--KLVA   63 (354)
T ss_dssp             EEEEEEC--SCSCEEEEEEEETTE-EEEEETTTEEEEECSSCE--EEEE
T ss_pred             EEEEEeC--CCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCc--eEee
Confidence            3444443  578999999999999 999999999999976653  5554

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=95.29  E-value=0.027  Score=38.64  Aligned_cols=35  Identities=11%  Similarity=0.073  Sum_probs=29.2

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEE
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~F   81 (88)
                      ..|..+++|++|+ +|.+. +++|.+|++++.....+
T Consensus       218 ~~p~~i~~d~~G~-l~v~~-~~~v~~~~~~g~~~~~~  252 (296)
T 3e5z_A          218 GKTDGLRVDAGGL-IWASA-GDGVHVLTPDGDELGRV  252 (296)
T ss_dssp             SCCCSEEEBTTSC-EEEEE-TTEEEEECTTSCEEEEE
T ss_pred             CCCCeEEECCCCC-EEEEc-CCeEEEECCCCCEEEEE
Confidence            4799999999999 99999 99999999876543333

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=95.10  E-value=0.029  Score=38.07  Aligned_cols=33  Identities=12%  Similarity=0.214  Sum_probs=27.8

Q ss_pred             CccCCceEEeccCCCcceEE-eecceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~~   76 (88)
                      +...|.++|+|++|+ +|.+ ..+++|.+|+.++.
T Consensus        28 ~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g~   61 (286)
T 1q7f_A           28 QFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGR   61 (286)
T ss_dssp             CBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSC
T ss_pred             ccCCCceEEECCCCC-EEEEECCCCEEEEECCCCc
Confidence            456799999999999 8876 67899999998754

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=94.96  E-value=0.042  Score=36.53  Aligned_cols=36  Identities=25%  Similarity=0.369  Sum_probs=29.9

Q ss_pred             CccCCceEEeccCCCcceEEeecceEEEEeCCCCCeE
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWT   79 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~   79 (88)
                      ....|.++++|++|+ +|.+..+++|.+|+.++....
T Consensus        65 ~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~  100 (270)
T 1rwi_B           65 GLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQT  100 (270)
T ss_dssp             SCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCE
T ss_pred             CcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEe
Confidence            346899999999999 999888999999998765433

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=94.80  E-value=0.075  Score=40.80  Aligned_cols=39  Identities=21%  Similarity=0.145  Sum_probs=31.1

Q ss_pred             CCccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEF   81 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~F   81 (88)
                      .++..|.+|||+++|+ +|.+-. .|||++++.++...+.+
T Consensus        29 ~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v   68 (347)
T 3das_A           29 TGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTEL   68 (347)
T ss_dssp             CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE
T ss_pred             cCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeee
Confidence            3578999999999999 898888 99999998654333333

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.77  E-value=0.027  Score=42.56  Aligned_cols=28  Identities=32%  Similarity=0.318  Sum_probs=24.7

Q ss_pred             CCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           46 GPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      |=..+.||++|. +|.. +||+|+|++++.
T Consensus        89 ~F~a~~fD~~G~-LYav-~dG~iyr~~pP~  116 (236)
T 1tl2_A           89 QFQFLFFDPNGY-LYAV-SKDKLYKASPPQ  116 (236)
T ss_dssp             GCSEEEECTTSC-EEEE-ETTEEEEESCCC
T ss_pred             cceEEEECCCCC-EEEe-CCCEEEEeCCCc
Confidence            447899999999 9999 999999999843

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=94.72  E-value=0.06  Score=36.86  Aligned_cols=47  Identities=15%  Similarity=0.162  Sum_probs=36.1

Q ss_pred             CceeEeeCCCCccCCceEEeccCCC-cceEEeecceEEEEeCCCCCeEEEE
Q 035894           33 NHHLKLQLPAGVVGPESLAFDCNGK-GPYAGVSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        33 ~~~~~l~l~~~v~GPESiAfD~~G~-GpYTGv~DGRIlR~~~~~~gw~~FA   82 (88)
                      ..++.+.-  +..-||++++|++|+ -.+++..+|+|.+|+.++. ...|.
T Consensus        18 ~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~   65 (296)
T 3e5z_A           18 AEARRLAD--GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM   65 (296)
T ss_dssp             CCCEEEEC--CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE
T ss_pred             CcEEEEec--CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE
Confidence            34555553  356899999999997 4668899999999998775 66654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=94.60  E-value=0.058  Score=35.85  Aligned_cols=30  Identities=27%  Similarity=0.462  Sum_probs=24.9

Q ss_pred             CCceEEeccCCCcceE-E-eecceEEEEeCCCC
Q 035894           46 GPESLAFDCNGKGPYA-G-VSDGRILKWQDSKL   76 (88)
Q Consensus        46 GPESiAfD~~G~GpYT-G-v~DGRIlR~~~~~~   76 (88)
                      .|+++++|++|+ +|. + ..+|+|.+|+..+.
T Consensus        25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~   56 (270)
T 1rwi_B           25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGST   56 (270)
T ss_dssp             CEEEEEECTTCC-EEEEECSSSCEEEEECC---
T ss_pred             CccceEECCCCC-EEEEccCCCCcEEEecCCCc
Confidence            999999999999 998 7 67899999987553

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=94.59  E-value=0.11  Score=34.47  Aligned_cols=46  Identities=13%  Similarity=0.151  Sum_probs=33.8

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEEE
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~FA   82 (88)
                      ...+.++.....|.++++|++|. +|.+.. +|+|.+|+.++ .+..+.
T Consensus        47 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~   93 (299)
T 2z2n_A           47 ITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKG-IIKEYT   93 (299)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEE
T ss_pred             eEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-cEEEEe
Confidence            34444443346899999999999 888866 79999999864 455554

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=94.58  E-value=0.11  Score=34.48  Aligned_cols=46  Identities=17%  Similarity=0.239  Sum_probs=34.9

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEEE
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~FA   82 (88)
                      +..+.++.....|.++++|++|+ +|.+.. +++|.+++.++ .+..+.
T Consensus        52 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~g-~~~~~~   98 (300)
T 2qc5_A           52 IKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKKG-GFTEYP   98 (300)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEE
T ss_pred             eEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCCC-CeEEec
Confidence            44455655556899999999999 888876 78999999873 466554

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=94.58  E-value=0.043  Score=40.69  Aligned_cols=31  Identities=19%  Similarity=0.363  Sum_probs=27.0

Q ss_pred             cCCceEEeccCCCcceEEeec--------------ceEEEEeCCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSD--------------GRILKWQDSKL   76 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~D--------------GRIlR~~~~~~   76 (88)
                      +-|..|+|++||. +|.++.|              |+|+|++++++
T Consensus       130 h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~  174 (353)
T 2g8s_A          130 HFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE  174 (353)
T ss_dssp             CCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred             ccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence            4588999999998 9999876              79999998875

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=94.17  E-value=0.073  Score=37.52  Aligned_cols=35  Identities=17%  Similarity=0.073  Sum_probs=29.0

Q ss_pred             cCCceEEeccCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 035894           45 VGPESLAFDCNGKGPYAGV-SDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~gw~~F   81 (88)
                      ..||++|+|++|+ +|..- .+|+|+||++++ +...+
T Consensus        32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~   67 (306)
T 2p4o_A           32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG-NQQIH   67 (306)
T ss_dssp             CCEEEEEECTTSC-EEEEETTTTEEEEECTTC-CEEEE
T ss_pred             CCcceEEECCCCC-EEEEeCCCCeEEEECCCC-ceEEE
Confidence            5899999999999 88875 789999999876 34443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=93.91  E-value=0.24  Score=33.43  Aligned_cols=44  Identities=7%  Similarity=0.061  Sum_probs=31.0

Q ss_pred             EeeCCCCccCCceEEeccCCCcceEEee-cc-eEEEEeCCCCCeEEE
Q 035894           37 KLQLPAGVVGPESLAFDCNGKGPYAGVS-DG-RILKWQDSKLGWTEF   81 (88)
Q Consensus        37 ~l~l~~~v~GPESiAfD~~G~GpYTGv~-DG-RIlR~~~~~~gw~~F   81 (88)
                      .+...+....|.++++|++|+ +|.+.. ++ +|.+|+.++.....+
T Consensus       199 ~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~~~~~~  244 (286)
T 1q7f_A          199 QIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQLISAL  244 (286)
T ss_dssp             EESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSCEEEEE
T ss_pred             EEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCCEEEEE
Confidence            343333346799999999998 888775 44 999999776433344

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.76  E-value=0.064  Score=41.71  Aligned_cols=33  Identities=18%  Similarity=0.218  Sum_probs=28.5

Q ss_pred             CccCCceEEeccCCCcceEEeec---------------------------------ceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD---------------------------------GRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D---------------------------------GRIlR~~~~~~   76 (88)
                      ..+.+-.|+||+||. +|.++.|                                 |+|+|++++++
T Consensus       142 ~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~  207 (454)
T 1cru_A          142 KDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS  207 (454)
T ss_dssp             SSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC
T ss_pred             CCCCCCeEeECCCCe-EEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCC
Confidence            347799999999999 9998765                                 78999999876

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=93.19  E-value=0.14  Score=39.86  Aligned_cols=36  Identities=22%  Similarity=0.179  Sum_probs=30.6

Q ss_pred             CCceEEeccCCCcceE-Eeec-ceEEEEeCCCCCeEEEE
Q 035894           46 GPESLAFDCNGKGPYA-GVSD-GRILKWQDSKLGWTEFA   82 (88)
Q Consensus        46 GPESiAfD~~G~GpYT-Gv~D-GRIlR~~~~~~gw~~FA   82 (88)
                      ||.++|+|++|+ .|. +..- +.|+|++++++.-..|.
T Consensus       138 ~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~~~~~~  175 (334)
T 2p9w_A          138 GVVQSAQDRDGN-SYVAFALGMPAIARVSADGKTVSTFA  175 (334)
T ss_dssp             EEEEEEECTTSC-EEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred             CCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCEEeeee
Confidence            699999999999 998 7778 99999999987555454

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=93.06  E-value=0.13  Score=39.41  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=28.3

Q ss_pred             CccCCceEEeccCCCcceEEeec--------------ceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD--------------GRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D--------------GRIlR~~~~~~   76 (88)
                      ..+.+-+|+|++||. +|-.+.|              |+|+|++.+++
T Consensus       138 ~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~  184 (347)
T 3das_A          138 VIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGE  184 (347)
T ss_dssp             SSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred             CCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence            346778899999998 9999864              99999999876

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=92.74  E-value=0.11  Score=36.04  Aligned_cols=35  Identities=23%  Similarity=0.286  Sum_probs=28.1

Q ss_pred             CccCCceEEeccCCCcceEEee---cceEEEEeCCCCCe
Q 035894           43 GVVGPESLAFDCNGKGPYAGVS---DGRILKWQDSKLGW   78 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~---DGRIlR~~~~~~gw   78 (88)
                      ....|..+||+++|+ +|+...   ||+|..|+-+...+
T Consensus        38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~   75 (347)
T 3hfq_A           38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA   75 (347)
T ss_dssp             ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE
T ss_pred             ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE
Confidence            346899999999999 999887   68999998754333

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=92.49  E-value=0.17  Score=38.00  Aligned_cols=38  Identities=13%  Similarity=-0.053  Sum_probs=30.8

Q ss_pred             ccCCceEEecc-CCCcceEEeecceEEEEeCCCCCeEEEE
Q 035894           44 VVGPESLAFDC-NGKGPYAGVSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        44 v~GPESiAfD~-~G~GpYTGv~DGRIlR~~~~~~gw~~FA   82 (88)
                      ..+|.++|+|+ +|. +|....+|+|+||+.+......++
T Consensus       218 ~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~  256 (409)
T 3hrp_A          218 SGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIK  256 (409)
T ss_dssp             CSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEE
T ss_pred             cCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEe
Confidence            46899999999 555 999888999999998765555553

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=92.36  E-value=0.13  Score=37.76  Aligned_cols=40  Identities=20%  Similarity=0.364  Sum_probs=30.6

Q ss_pred             eeEeeCCCC-------ccCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           35 HLKLQLPAG-------VVGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~-------v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      ...+.|..+       ...||.||||++|+ +|-...--+++|+....
T Consensus       207 ~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~~  253 (255)
T 3qqz_A          207 IGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTPQS  253 (255)
T ss_dssp             EEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC--
T ss_pred             EEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEecC
Confidence            445566532       46899999999999 99998888999998754

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=92.26  E-value=0.31  Score=37.85  Aligned_cols=47  Identities=9%  Similarity=0.050  Sum_probs=34.6

Q ss_pred             CceeEeeCCCCccCCceEEeccCCCcceEEeecc-eEEEEeCCCCCeEEEE
Q 035894           33 NHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDG-RILKWQDSKLGWTEFA   82 (88)
Q Consensus        33 ~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DG-RIlR~~~~~~gw~~FA   82 (88)
                      -.++.+.-  ++..|.++||+++|+ +|.+-.+| ||++++.++...+.++
T Consensus        17 f~~~~~a~--~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~   64 (454)
T 1cru_A           17 FDKKVILS--NLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVF   64 (454)
T ss_dssp             SCEEEEEC--CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEE
T ss_pred             eEEEEEEC--CCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEe
Confidence            34555543  478999999999999 99998886 8999986433345444

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=92.15  E-value=0.22  Score=35.18  Aligned_cols=38  Identities=18%  Similarity=0.300  Sum_probs=29.2

Q ss_pred             CccCCceEEecc-CCCcceEEe--ecceEEEEeCCCCCeEEE
Q 035894           43 GVVGPESLAFDC-NGKGPYAGV--SDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        43 ~v~GPESiAfD~-~G~GpYTGv--~DGRIlR~~~~~~gw~~F   81 (88)
                      +...|.++|+|+ +|+ +|..-  .+++|.+|+.++.-...+
T Consensus       141 ~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~g~~~~~~  181 (329)
T 3fvz_A          141 HFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPSGKFVTQW  181 (329)
T ss_dssp             CCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTTSCEEEEE
T ss_pred             ccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCCCCEEEEe
Confidence            344799999999 788 88887  489999999776533333

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=92.12  E-value=0.16  Score=35.64  Aligned_cols=35  Identities=11%  Similarity=0.200  Sum_probs=28.6

Q ss_pred             CCceEEeccCCCcceEEeec-----------ceEEEEeCCCCCeEEE
Q 035894           46 GPESLAFDCNGKGPYAGVSD-----------GRILKWQDSKLGWTEF   81 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~D-----------GRIlR~~~~~~gw~~F   81 (88)
                      ||..+++|++|+ +|.+...           ++|++++++++-...+
T Consensus       230 gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~  275 (322)
T 2fp8_A          230 NPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI  275 (322)
T ss_dssp             SEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred             CCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence            599999999998 9999865           8999999876544444

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=91.87  E-value=0.14  Score=35.66  Aligned_cols=35  Identities=11%  Similarity=0.181  Sum_probs=27.9

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCCCCeEEE
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~F   81 (88)
                      -.|..+++|++|+ +|.+..+| |.+|+++++....+
T Consensus       239 ~~pdgi~~d~~G~-lwv~~~~g-v~~~~~~g~~~~~~  273 (305)
T 3dr2_A          239 GLPDGFCVDRGGW-LWSSSGTG-VCVFDSDGQLLGHI  273 (305)
T ss_dssp             SCCCSEEECTTSC-EEECCSSE-EEEECTTSCEEEEE
T ss_pred             CCCCeEEECCCCC-EEEecCCc-EEEECCCCCEEEEE
Confidence            3689999999999 99999655 99999876544433

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=91.29  E-value=0.28  Score=34.17  Aligned_cols=29  Identities=21%  Similarity=0.506  Sum_probs=25.3

Q ss_pred             cCCceEEeccCCCcceEEee-cceEEEEeCC
Q 035894           45 VGPESLAFDCNGKGPYAGVS-DGRILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~   74 (88)
                      ..|..+++|++|+ +|.+.. +|+|.||+++
T Consensus       199 ~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~  228 (297)
T 3g4e_A          199 QIPDGMCIDAEGK-LWVACYNGGRVIRLDPV  228 (297)
T ss_dssp             CEEEEEEEBTTSC-EEEEEETTTEEEEECTT
T ss_pred             CCCCeeEECCCCC-EEEEEcCCCEEEEEcCC
Confidence            4699999999998 999876 5789999987

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=90.89  E-value=0.33  Score=33.40  Aligned_cols=36  Identities=22%  Similarity=0.466  Sum_probs=28.2

Q ss_pred             cCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEE
Q 035894           45 VGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEF   81 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~F   81 (88)
                      ..|..+++|++|+ +|.+.. +|+|.+|+.++.....+
T Consensus       233 ~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~~~~~~  269 (333)
T 2dg1_A          233 EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYPIGQI  269 (333)
T ss_dssp             SEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCEEEEE
T ss_pred             CCCCceEECCCCC-EEEEEcCCCEEEEECCCCCEEEEE
Confidence            3689999999999 998875 68999999865433333

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=90.72  E-value=0.2  Score=34.10  Aligned_cols=39  Identities=15%  Similarity=0.275  Sum_probs=30.1

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEee-------cceEEEEeCCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVS-------DGRILKWQDSKL   76 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~-------DGRIlR~~~~~~   76 (88)
                      ....++.   .+|.+++++++|+-+|++..       ||+|..|+.+..
T Consensus        34 ~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~   79 (353)
T 3vgz_A           34 MLRKAVG---KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL   79 (353)
T ss_dssp             EEEEEEE---SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC
T ss_pred             hhhhhhc---cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC
Confidence            4444442   58999999999988999885       568999997643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=90.68  E-value=0.28  Score=38.63  Aligned_cols=33  Identities=21%  Similarity=0.186  Sum_probs=27.0

Q ss_pred             CccCCceEEeccCCCcceEEeec------------------ceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD------------------GRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D------------------GRIlR~~~~~~   76 (88)
                      ..+.--.|+|++||. +|-++.|                  |+|+|+++++.
T Consensus       137 ~~H~g~~l~fgpDG~-LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~  187 (463)
T 2wg3_C          137 RKHLGGQLLFGPDGF-LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD  187 (463)
T ss_dssp             SSSCEEEEEECTTSC-EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC
T ss_pred             CcccCCcEeECCCCc-EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC
Confidence            345566799999999 9999876                  67999999874

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=90.59  E-value=0.23  Score=35.04  Aligned_cols=33  Identities=18%  Similarity=0.251  Sum_probs=27.2

Q ss_pred             CccCCceEEeccCCCcceEE-eecceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~~   76 (88)
                      ....|.++|+|++|+ +|.. ..+++|.+|+.++.
T Consensus        89 ~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~  122 (329)
T 3fvz_A           89 LFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSK  122 (329)
T ss_dssp             TCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCS
T ss_pred             ccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCC
Confidence            456899999999999 7765 45799999998764

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=90.22  E-value=0.31  Score=34.21  Aligned_cols=30  Identities=17%  Similarity=0.415  Sum_probs=26.0

Q ss_pred             cCCceEEeccCCCcceEEee-cceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVS-DGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~   75 (88)
                      ..|..+++|++|+ +|.... .++|.++++++
T Consensus       212 ~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G  242 (306)
T 2p4o_A          212 TNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR  242 (306)
T ss_dssp             CCCSSEEEBTTCC-EEEECBTTCCEEEECTTC
T ss_pred             CCCCCeEECCCCC-EEEEeCCCCeEEEECCCC
Confidence            4799999999998 898875 68999999875

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=90.02  E-value=0.4  Score=32.33  Aligned_cols=29  Identities=14%  Similarity=0.245  Sum_probs=25.4

Q ss_pred             cCCceEEeccCCCcceEEe-ecceEEEEeCC
Q 035894           45 VGPESLAFDCNGKGPYAGV-SDGRILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~   74 (88)
                      ..|.++++|++|+ +|.+. .+++|.+|+++
T Consensus       226 ~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~  255 (314)
T 1pjx_A          226 GGADGMDFDEDNN-LLVANWGSSHIEVFGPD  255 (314)
T ss_dssp             CEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred             CCCCceEECCCCC-EEEEEcCCCEEEEEcCC
Confidence            4689999999998 99887 57899999987

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=89.98  E-value=0.24  Score=36.60  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=28.9

Q ss_pred             CccCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      ++..|.+|+|+++|+.+|..-.+|||++++.++
T Consensus        16 ~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g   48 (353)
T 2g8s_A           16 KLDHPWALAFLPDNHGMLITLRGGELRHWQAGK   48 (353)
T ss_dssp             EESSEEEEEECSTTCCEEEEETTTEEEEEETTT
T ss_pred             CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCC
Confidence            467899999999998789998999999998654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=89.24  E-value=0.76  Score=31.89  Aligned_cols=37  Identities=14%  Similarity=0.049  Sum_probs=30.0

Q ss_pred             CCceEEeccCCCcceEEeecceEEEEeCCCCCeEEEEEC
Q 035894           46 GPESLAFDCNGKGPYAGVSDGRILKWQDSKLGWTEFAST   84 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~gw~~FA~T   84 (88)
                      .|.++++|++|+ +|.+. +++|.+|+.+...++.++..
T Consensus        55 ~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~   91 (297)
T 3g4e_A           55 PVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATV   91 (297)
T ss_dssp             CEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred             ceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEec
Confidence            688999999999 99997 67899999876556666543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=88.76  E-value=1.5  Score=31.30  Aligned_cols=41  Identities=15%  Similarity=0.117  Sum_probs=30.9

Q ss_pred             CCccCCceEEeccCCCcceEE-eecceEEEEeCCCCCeEEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~~gw~~FA   82 (88)
                      .+...|+.+|+|..++.+|.. ..+++|.+++.++.....+.
T Consensus        74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~  115 (316)
T 1ijq_A           74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF  115 (316)
T ss_dssp             SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE
T ss_pred             CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE
Confidence            355799999999876669976 56789999988775544444

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=88.33  E-value=0.4  Score=32.25  Aligned_cols=26  Identities=35%  Similarity=0.649  Sum_probs=23.3

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQD   73 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~   73 (88)
                      -+++|.++|+-++||..||.|.-|+-
T Consensus       310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~  335 (340)
T 4aow_A          310 TSLAWSADGQTLFAGYTDNLVRVWQV  335 (340)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred             EEEEECCCCCEEEEEeCCCEEEEEeC
Confidence            46899999998999999999999974

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=88.32  E-value=0.62  Score=32.39  Aligned_cols=48  Identities=15%  Similarity=0.150  Sum_probs=35.0

Q ss_pred             ceeEeeCCCCccCCceEEeccCCC-cceEEeecceEEEEeCCCCCeEEEEEC
Q 035894           34 HHLKLQLPAGVVGPESLAFDCNGK-GPYAGVSDGRILKWQDSKLGWTEFAST   84 (88)
Q Consensus        34 ~~~~l~l~~~v~GPESiAfD~~G~-GpYTGv~DGRIlR~~~~~~gw~~FA~T   84 (88)
                      .++++.-  +..-+|..+++++|+ -.+++..+|+|.||+.++ +...|...
T Consensus        36 ~~~~l~~--~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~~~~~~~   84 (305)
T 3dr2_A           36 RLLTLYD--QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-TVDVLLDA   84 (305)
T ss_dssp             CCEEEEC--CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-CEEEEEES
T ss_pred             ceEEEec--CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-CEEEEeCC
Confidence            4555544  346789999999997 467888899999999854 45656543

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=88.24  E-value=0.96  Score=30.22  Aligned_cols=31  Identities=13%  Similarity=0.198  Sum_probs=27.8

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      ..|.+++|+++|+-+|++..||.|..|+...
T Consensus       280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~  310 (337)
T 1pby_B          280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAET  310 (337)
T ss_dssp             SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred             CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence            4799999999998899999999999998754

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=87.56  E-value=1  Score=29.56  Aligned_cols=39  Identities=13%  Similarity=0.215  Sum_probs=31.3

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCC-CCCeEEEEE
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDS-KLGWTEFAS   83 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~-~~gw~~FA~   83 (88)
                      ..-.+++|.++|+-+++|..||.|.-|+-. +..|..+..
T Consensus       307 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~  346 (351)
T 3f3f_A          307 GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSV  346 (351)
T ss_dssp             SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred             ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence            356789999999889999999999999874 445776654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=87.46  E-value=1.9  Score=28.96  Aligned_cols=44  Identities=14%  Similarity=0.244  Sum_probs=33.4

Q ss_pred             CCceeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           32 GNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        32 ~~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      +...+.+.+.+.-..-.+++|.++|+-+++|..||.|.-|+...
T Consensus        20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~   63 (369)
T 3zwl_B           20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN   63 (369)
T ss_dssp             CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT
T ss_pred             ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC
Confidence            33455566655434557899999998899999999999998643

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=87.26  E-value=0.79  Score=34.31  Aligned_cols=38  Identities=16%  Similarity=-0.142  Sum_probs=29.5

Q ss_pred             ccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEEE
Q 035894           44 VVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        44 v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~FA   82 (88)
                      ...|..+|+|++|+ +|..-. +++|.+|+.++.....++
T Consensus       130 ~~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~  168 (409)
T 3hrp_A          130 FKYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVH  168 (409)
T ss_dssp             CCCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cCCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEee
Confidence            45899999999999 888765 589999998754444443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=87.04  E-value=1.6  Score=29.50  Aligned_cols=39  Identities=15%  Similarity=0.080  Sum_probs=28.8

Q ss_pred             CccCCceEEeccCCCcceEEeec---ceEEEEeCCCCCeEEE
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD---GRILKWQDSKLGWTEF   81 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D---GRIlR~~~~~~gw~~F   81 (88)
                      +...|.++|+|++++-+|..-..   ++|.+++.++...+.+
T Consensus       120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~  161 (267)
T 1npe_A          120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL  161 (267)
T ss_dssp             SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred             CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence            44689999999965549987653   7999998876544443

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=86.53  E-value=0.65  Score=31.48  Aligned_cols=31  Identities=26%  Similarity=0.436  Sum_probs=27.8

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      ..|.+++++++|+-+|++..||+|..|+...
T Consensus       185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~  215 (353)
T 3vgz_A          185 KMSTGLALDSEGKRLYTTNADGELITIDTAD  215 (353)
T ss_dssp             TTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred             CccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence            4599999999999899999999999998754

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=86.14  E-value=0.92  Score=34.61  Aligned_cols=38  Identities=11%  Similarity=-0.176  Sum_probs=29.4

Q ss_pred             CccCCceEEeccC---CCcceEEeecceEEEEeCCCCCeEEE
Q 035894           43 GVVGPESLAFDCN---GKGPYAGVSDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        43 ~v~GPESiAfD~~---G~GpYTGv~DGRIlR~~~~~~gw~~F   81 (88)
                      +...|+.+|+|++   |+ +|..-..+||.|++........+
T Consensus       137 ~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~  177 (433)
T 4hw6_A          137 AFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIK  177 (433)
T ss_dssp             CCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEE
T ss_pred             ccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEe
Confidence            4568999999985   66 99987779999999855444444

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=85.76  E-value=1  Score=31.88  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=25.9

Q ss_pred             cCCceEEeccCCCcceEEee-cceEEEEeCCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVS-DGRILKWQDSKL   76 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~   76 (88)
                      ..|.++++|++|. +|.+.. +|+|.+|++++.
T Consensus       230 ~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~  261 (326)
T 2ghs_A          230 GGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN  261 (326)
T ss_dssp             SEEEEEEECTTSC-EEEEEETTTEEEEECTTCC
T ss_pred             CCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC
Confidence            3588999999998 998875 589999998654

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=85.57  E-value=0.67  Score=32.31  Aligned_cols=26  Identities=38%  Similarity=0.640  Sum_probs=23.5

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQD   73 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~   73 (88)
                      .+++|.++|+-+++|..||.|.-|+-
T Consensus       290 ~~~~~spdg~~l~sg~~Dg~i~vWd~  315 (319)
T 3frx_A          290 VSLAWSADGQTLFAGYTDNVIRVWQV  315 (319)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred             eEEEECCCCCEEEEeecCceEEEEEE
Confidence            47999999999999999999999874

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=85.18  E-value=1.6  Score=29.39  Aligned_cols=29  Identities=28%  Similarity=0.331  Sum_probs=25.6

Q ss_pred             CCceEEeccCCCcceEEeec------------ceEEEEeCC
Q 035894           46 GPESLAFDCNGKGPYAGVSD------------GRILKWQDS   74 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~D------------GRIlR~~~~   74 (88)
                      .|.+++++++|+-+|++..|            ++|..|+..
T Consensus        93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~  133 (349)
T 1jmx_B           93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA  133 (349)
T ss_dssp             CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred             cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence            48999999999889999877            999999864

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=84.98  E-value=2.2  Score=28.81  Aligned_cols=38  Identities=18%  Similarity=0.091  Sum_probs=28.3

Q ss_pred             CccCCceEEeccCCCcceEEe-ecceEEEEeCCCCCeEE
Q 035894           43 GVVGPESLAFDCNGKGPYAGV-SDGRILKWQDSKLGWTE   80 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~gw~~   80 (88)
                      +..+|+.+|+|++++-+|..- .+++|.+++.++.....
T Consensus        77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~  115 (267)
T 1npe_A           77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV  115 (267)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence            456999999999765588664 46899999887644333

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=84.48  E-value=1.1  Score=32.58  Aligned_cols=36  Identities=17%  Similarity=0.253  Sum_probs=29.5

Q ss_pred             CCceEEecc--CCCcceEEeecc----eEEEEeCCCCCeEEEE
Q 035894           46 GPESLAFDC--NGKGPYAGVSDG----RILKWQDSKLGWTEFA   82 (88)
Q Consensus        46 GPESiAfD~--~G~GpYTGv~DG----RIlR~~~~~~gw~~FA   82 (88)
                      .-.+|++|+  ++. +|.|...|    .|+|....+..|+...
T Consensus        56 ~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~   97 (394)
T 3b7f_A           56 TIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEAT   97 (394)
T ss_dssp             EEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECS
T ss_pred             ceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECC
Confidence            568999998  666 99999999    8999887777898764

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=84.40  E-value=1.6  Score=29.12  Aligned_cols=30  Identities=13%  Similarity=0.034  Sum_probs=26.2

Q ss_pred             CCceEEeccCCCcceEEe------------ecceEEEEeCCC
Q 035894           46 GPESLAFDCNGKGPYAGV------------SDGRILKWQDSK   75 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv------------~DGRIlR~~~~~   75 (88)
                      .|.+++++++|+-+|++.            .|++|..|+...
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~  124 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET  124 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCC
Confidence            799999999997799886            579999999864

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=84.25  E-value=2.3  Score=28.44  Aligned_cols=30  Identities=17%  Similarity=0.224  Sum_probs=26.2

Q ss_pred             cCCceEEeccCCCcceEEeec-ceEEEEeCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSD-GRILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~D-GRIlR~~~~   74 (88)
                      ..|..++++++|+-+|++..+ |+|..|+-+
T Consensus        38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~   68 (343)
T 1ri6_A           38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA   68 (343)
T ss_dssp             SCCCCEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCCceEEECCCCCEEEEeecCCCeEEEEEec
Confidence            479999999999889999887 899988765

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=84.13  E-value=1.3  Score=29.78  Aligned_cols=31  Identities=19%  Similarity=0.216  Sum_probs=27.4

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      .+|.+++++++|+-+|++..||+|..|+...
T Consensus       295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~  325 (349)
T 1jmx_B          295 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT  325 (349)
T ss_dssp             SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred             CCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence            4799999999998799999999999999754

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=84.09  E-value=0.91  Score=30.17  Aligned_cols=27  Identities=19%  Similarity=0.261  Sum_probs=23.8

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDS   74 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~   74 (88)
                      -+++|.++|+-+.||..||.|.-|+-.
T Consensus       288 ~~l~~spdg~~l~S~s~D~~v~iWd~~  314 (318)
T 4ggc_A          288 LSLTMSPDGATVASAAADETLRLWRCF  314 (318)
T ss_dssp             EEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             EEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            568999999889999999999999753

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=83.66  E-value=3  Score=29.78  Aligned_cols=40  Identities=13%  Similarity=-0.056  Sum_probs=29.8

Q ss_pred             CccCCceEEeccCCCcceEEeec--ceEEEEeCCCCCeEEEE
Q 035894           43 GVVGPESLAFDCNGKGPYAGVSD--GRILKWQDSKLGWTEFA   82 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~D--GRIlR~~~~~~gw~~FA   82 (88)
                      +...|.++|+|++++-+|-.-.+  ++|.|++.++...+.+.
T Consensus       118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~  159 (316)
T 1ijq_A          118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV  159 (316)
T ss_dssp             TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred             CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE
Confidence            45689999999865558876543  79999998876655543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=83.63  E-value=2.3  Score=29.49  Aligned_cols=32  Identities=25%  Similarity=0.456  Sum_probs=26.5

Q ss_pred             ccCCceEEeccCCCcceEEe-ecceEEEEeCCC
Q 035894           44 VVGPESLAFDCNGKGPYAGV-SDGRILKWQDSK   75 (88)
Q Consensus        44 v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~   75 (88)
                      ..+|.+++|+++|+-+|... .+++|..|+-+.
T Consensus       210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~  242 (361)
T 3scy_A          210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD  242 (361)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred             CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence            36899999999998788877 589998887653

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=83.53  E-value=1.5  Score=32.94  Aligned_cols=37  Identities=16%  Similarity=0.090  Sum_probs=29.9

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDS   74 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~   74 (88)
                      +.++.-. +...-+++||+|+|. +|.. .+|.++|.++.
T Consensus        32 a~~iG~~-gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~   68 (236)
T 1tl2_A           32 ATLIGKG-GWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPP   68 (236)
T ss_dssp             SEEEESS-SCTTCSEEEECTTSC-EEEE-ETTEEEEESCC
T ss_pred             ccccCcc-ccccceeEEECCCcc-EEEE-eCCeEEEECCC
Confidence            4455443 366788999999999 9999 99999999874

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=83.49  E-value=1.7  Score=30.98  Aligned_cols=35  Identities=11%  Similarity=0.173  Sum_probs=26.8

Q ss_pred             CCceEEeccCCCcceEEe-ecceEEEEeC-CCCCeEEEE
Q 035894           46 GPESLAFDCNGKGPYAGV-SDGRILKWQD-SKLGWTEFA   82 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv-~DGRIlR~~~-~~~gw~~FA   82 (88)
                      .|..+|+|++|+ +|.+. .+++|.+|+. ++ .+...+
T Consensus       249 ~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G-~~~~~~  285 (343)
T 2qe8_A          249 ICDGISIDKDHN-IYVGDLAHSAIGVITSADR-AYKLLV  285 (343)
T ss_dssp             SCSCEEECTTCC-EEEEEGGGTEEEEEETTTT-EEEEEE
T ss_pred             CCceEEECCCCC-EEEEccCCCeEEEEECCCC-CEEEEE
Confidence            588999999998 77665 5789999998 54 344443

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=83.42  E-value=1  Score=31.45  Aligned_cols=26  Identities=38%  Similarity=0.570  Sum_probs=23.4

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQD   73 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~   73 (88)
                      .+++|+++|.-+++|..||.|.-|+-
T Consensus       313 ~~~~~sp~g~~l~sg~~Dg~v~~w~~  338 (343)
T 2xzm_R          313 TSLAWNALGKKLFAGFTDGVIRTFSF  338 (343)
T ss_dssp             EEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred             EEEEECCCCCeEEEecCCceEEEEEE
Confidence            47999999998999999999998874

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=83.24  E-value=2.2  Score=32.35  Aligned_cols=33  Identities=12%  Similarity=0.169  Sum_probs=26.7

Q ss_pred             ccCCceEEecc-CCCcceEE-eecceEEEEeCCCCC
Q 035894           44 VVGPESLAFDC-NGKGPYAG-VSDGRILKWQDSKLG   77 (88)
Q Consensus        44 v~GPESiAfD~-~G~GpYTG-v~DGRIlR~~~~~~g   77 (88)
                      ..+|.++|+|+ +|. +|.. ..++||+|++.++..
T Consensus       225 ~~~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~  259 (430)
T 3tc9_A          225 GQNCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQE  259 (430)
T ss_dssp             CSSCCCEEECTTTCC-EEEEETTTTEEEEEETTTTE
T ss_pred             CCCceEEEEeCCCCE-EEEEECCCCEEEEEECCCCc
Confidence            46899999999 777 8865 477999999987543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=82.73  E-value=1.9  Score=29.20  Aligned_cols=31  Identities=16%  Similarity=0.165  Sum_probs=25.2

Q ss_pred             CCceEEeccCCCcceEEeecceEEEEeCCCCC
Q 035894           46 GPESLAFDCNGKGPYAGVSDGRILKWQDSKLG   77 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~DGRIlR~~~~~~g   77 (88)
                      -..++++|++|. +|.|+.+|.|++++.++..
T Consensus       216 ~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~  246 (330)
T 3hxj_A          216 TVTRPAISEDGT-IYVTSLDGHLYAINPDGTE  246 (330)
T ss_dssp             CCSCCEECTTSC-EEEEETTTEEEEECTTSCE
T ss_pred             ceeceEECCCCe-EEEEcCCCeEEEECCCCCE
Confidence            356788999988 9999999999999765543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=82.55  E-value=1.1  Score=35.24  Aligned_cols=28  Identities=21%  Similarity=0.211  Sum_probs=24.4

Q ss_pred             CCceEEeccCCCcceEEe--------ecceEEEEeCC
Q 035894           46 GPESLAFDCNGKGPYAGV--------SDGRILKWQDS   74 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv--------~DGRIlR~~~~   74 (88)
                      -|-+|++|+||. +|...        .+|||+|+..+
T Consensus       337 r~~~v~~~pdG~-Lyv~~~~~~~~~~~~G~I~Ri~~p  372 (463)
T 2wg3_C          337 HILGFGEDELGE-VYILSSSKSMTQTHNGKLYKIVDP  372 (463)
T ss_dssp             EEEEEEECTTCC-EEEEEESSCGGGCSSEEEEEEECT
T ss_pred             cceEEEECCCCC-EEEEeccCCcccCCCCcEEEecCc
Confidence            589999999999 99998        48999999843

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=82.40  E-value=2.5  Score=30.84  Aligned_cols=40  Identities=15%  Similarity=0.020  Sum_probs=29.3

Q ss_pred             CCccCCceEEeccCCCcceEEee-c-ceEEEEeCCCCCeEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAGVS-D-GRILKWQDSKLGWTEF   81 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTGv~-D-GRIlR~~~~~~gw~~F   81 (88)
                      .+...|.++|+|++++-+|-.-. + ++|.|++.++...+.+
T Consensus       156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~  197 (349)
T 3v64_C          156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII  197 (349)
T ss_dssp             TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred             CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence            35678999999986655886643 3 8999998877554443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=82.17  E-value=0.96  Score=32.11  Aligned_cols=32  Identities=22%  Similarity=0.275  Sum_probs=27.7

Q ss_pred             ccCCceEEeccCCCcceEEe-ecceEEEEeCCCC
Q 035894           44 VVGPESLAFDCNGKGPYAGV-SDGRILKWQDSKL   76 (88)
Q Consensus        44 v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~   76 (88)
                      ...|+.+|++++|+ +|.+. .+++|.+|+....
T Consensus        83 ~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~  115 (328)
T 3dsm_A           83 FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTY  115 (328)
T ss_dssp             CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTT
T ss_pred             CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCC
Confidence            36899999999997 99998 7999999998653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=81.28  E-value=1.4  Score=29.47  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=25.4

Q ss_pred             CceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           47 PESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        47 PESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      -.+++|+++|+-+++|..||.|.-|+-..
T Consensus       218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~  246 (340)
T 4aow_A          218 LNTVTVSPDGSLCASGGKDGQAMLWDLNE  246 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred             EEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence            36789999999899999999999998754

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=81.11  E-value=1.4  Score=36.95  Aligned_cols=38  Identities=26%  Similarity=0.666  Sum_probs=28.6

Q ss_pred             cCCceEEeccC-CCcceEEeec----------------------ceEEEEeCCCC-------CeEEEEE
Q 035894           45 VGPESLAFDCN-GKGPYAGVSD----------------------GRILKWQDSKL-------GWTEFAS   83 (88)
Q Consensus        45 ~GPESiAfD~~-G~GpYTGv~D----------------------GRIlR~~~~~~-------gw~~FA~   83 (88)
                      .-||++++++. |+ +|..+.+                      |+|+||.+++.       .|+.|+.
T Consensus       384 dRpEdi~v~p~~g~-vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~  451 (592)
T 4a9v_A          384 DRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVV  451 (592)
T ss_dssp             ECEEEEEECTTTCC-EEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEE
T ss_pred             cCccceeEcCCCCE-EEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEE
Confidence            46999999984 66 9988643                      89999986432       3888764

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=80.73  E-value=5.5  Score=29.44  Aligned_cols=41  Identities=17%  Similarity=0.039  Sum_probs=30.4

Q ss_pred             CCccCCceEEeccCCCcceEEee-c-ceEEEEeCCCCCeEEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAGVS-D-GRILKWQDSKLGWTEFA   82 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTGv~-D-GRIlR~~~~~~gw~~FA   82 (88)
                      .+...|.+||+|++++-+|-.-. + ++|.|++.++.....+.
T Consensus       199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~  241 (386)
T 3v65_B          199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA  241 (386)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred             CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence            35678999999987665887653 3 79999998876555544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=80.52  E-value=6.4  Score=28.65  Aligned_cols=38  Identities=24%  Similarity=0.101  Sum_probs=28.7

Q ss_pred             CccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEE
Q 035894           43 GVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTE   80 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~   80 (88)
                      +...|+.+|+|..++.+|-.-. .++|.+++.++...+.
T Consensus       114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~  152 (349)
T 3v64_C          114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  152 (349)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence            4578999999987666887654 6799999887754443

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=80.27  E-value=3.1  Score=27.76  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=26.4

Q ss_pred             CCceEEeccCCCcceEEe-ecceEEEE--eCCCCCeEE
Q 035894           46 GPESLAFDCNGKGPYAGV-SDGRILKW--QDSKLGWTE   80 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv-~DGRIlR~--~~~~~gw~~   80 (88)
                      .|.+++|+++|+-+|++. .||+|..|  +.....++.
T Consensus       278 ~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~  315 (343)
T 1ri6_A          278 QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE  315 (343)
T ss_dssp             SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred             ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence            499999999998899988 57888887  443333443

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=80.06  E-value=1.7  Score=31.00  Aligned_cols=28  Identities=21%  Similarity=0.358  Sum_probs=25.1

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      -+++|.++|.-+.||..||.|.-|+-.+
T Consensus       348 ~~l~~s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          348 SCLGLSSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             CEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred             EEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence            5789999999899999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	88
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	96.95
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	96.32
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	95.69
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	95.27
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	95.04
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	94.74
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	94.67
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	94.5
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	94.28
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	93.6
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	93.55
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	93.35
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	92.82
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	92.76
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	92.6
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	92.52
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	92.52
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	92.5
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	92.22
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	90.9
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	90.75
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	89.8
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	88.77
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	88.23
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	88.06
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	87.87
d1tbga_	340	beta1-subunit of the signal-transducing G protein	87.73
d1tbga_	340	beta1-subunit of the signal-transducing G protein	87.13
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	86.38
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	84.92
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	83.73
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	82.91
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	82.61

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=96.95  E-value=0.0012  Score=46.34  Aligned_cols=47  Identities=26%  Similarity=0.244  Sum_probs=34.9

Q ss_pred             CceeEeeCCCCccCCceEEeccCCCcceEEee--------cceEEEEeCCCCCeEEEE
Q 035894           33 NHHLKLQLPAGVVGPESLAFDCNGKGPYAGVS--------DGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        33 ~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~--------DGRIlR~~~~~~gw~~FA   82 (88)
                      +.++++.-  +..|||.+|+|++|+ +|-...        +|||+||++++..++.++
T Consensus         8 ~~~~~v~~--~~~g~EGpa~d~dG~-ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~   62 (314)
T d1pjxa_           8 PLFTKVTE--DIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC   62 (314)
T ss_dssp             CCCEEEEC--CCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEE
T ss_pred             cceEEeec--CCCCCeEeEEeCCCC-EEEEECccccccccCCEEEEEECCCCcEEEEE
Confidence            34555544  578999999999999 997533        579999998776665554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=96.32  E-value=0.002  Score=44.05  Aligned_cols=37  Identities=19%  Similarity=0.093  Sum_probs=30.2

Q ss_pred             CCceEEeccCCCcce-EEeecceEEEEeCCCCCeEEEEEC
Q 035894           46 GPESLAFDCNGKGPY-AGVSDGRILKWQDSKLGWTEFAST   84 (88)
Q Consensus        46 GPESiAfD~~G~GpY-TGv~DGRIlR~~~~~~gw~~FA~T   84 (88)
                      =||++|+++||+ +| |...+|+|+||+++++ ++.++..
T Consensus        29 ~~e~iAv~pdG~-l~vt~~~~~~I~~i~p~g~-~~~~~~~   66 (302)
T d2p4oa1          29 FLENLASAPDGT-IFVTNHEVGEIVSITPDGN-QQIHATV   66 (302)
T ss_dssp             CEEEEEECTTSC-EEEEETTTTEEEEECTTCC-EEEEEEC
T ss_pred             CcCCEEECCCCC-EEEEeCCCCEEEEEeCCCC-EEEEEcC
Confidence            499999999999 66 6677999999998874 6666544

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.69  E-value=0.014  Score=37.14  Aligned_cols=41  Identities=10%  Similarity=0.041  Sum_probs=33.1

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcce-EEeecceEEEEeCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPY-AGVSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpY-TGv~DGRIlR~~~~~   75 (88)
                      ...++++....+|-+++|++||+-+| +|..||.|..|+-..
T Consensus        24 ~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t   65 (337)
T d1pbyb_          24 DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT   65 (337)
T ss_dssp             EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             EEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCC
Confidence            55677776556899999999999777 567899999998754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.27  E-value=0.026  Score=38.94  Aligned_cols=43  Identities=9%  Similarity=0.199  Sum_probs=33.6

Q ss_pred             eeCCCCccCCceEEeccCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 035894           38 LQLPAGVVGPESLAFDCNGKGPYAGV-SDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        38 l~l~~~v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~gw~~F   81 (88)
                      +.+++..-+|..+++|.+|+ +|.+. ..|+|.||+++++-...+
T Consensus       192 ~~~~~~~g~pdG~~vD~~Gn-lWva~~~~g~V~~~dp~G~~~~~i  235 (295)
T d2ghsa1         192 IDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNHIARY  235 (295)
T ss_dssp             EECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCEEEEE
T ss_pred             eccCcccccccceEEcCCCC-EEeeeeCCCceEEecCCCcEeeEe
Confidence            44554445799999999999 99887 578999999988655544

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.04  E-value=0.02  Score=36.36  Aligned_cols=38  Identities=16%  Similarity=0.263  Sum_probs=31.7

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      ..++..+   .+|.+++|++||+-+|+|..||.|.-|+...
T Consensus       273 ~~~~~~~---~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t  310 (337)
T d1pbyb_         273 IKRVPLP---HSYYSVNVSTDGSTVWLGGALGDLAAYDAET  310 (337)
T ss_dssp             EEEEECS---SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred             EEEEcCC---CCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence            4455553   4799999999999899999999999999764

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=94.74  E-value=0.015  Score=39.51  Aligned_cols=32  Identities=16%  Similarity=0.335  Sum_probs=27.5

Q ss_pred             ccCCceEEeccCCCcceEEe-ecceEEEEeCCCC
Q 035894           44 VVGPESLAFDCNGKGPYAGV-SDGRILKWQDSKL   76 (88)
Q Consensus        44 v~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~   76 (88)
                      ..+|.++++|++|+ +|... .+|+|+||++++.
T Consensus       207 ~~~pdgia~d~dG~-l~va~~~~~~V~~i~p~G~  239 (302)
T d2p4oa1         207 QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDRS  239 (302)
T ss_dssp             SCCCSSEEEBTTCC-EEEECBTTCCEEEECTTCC
T ss_pred             CCCCcceEECCCCC-EEEEEcCCCcEEEECCCCC
Confidence            36899999999999 88876 5899999998764

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=94.67  E-value=0.033  Score=35.47  Aligned_cols=40  Identities=15%  Similarity=0.175  Sum_probs=31.8

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEE-eecceEEEEeCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~   75 (88)
                      +..+.+|.+ .||.+++|++||+-+|.. ..||+|..|+...
T Consensus        31 ~~t~~~~~~-~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t   71 (346)
T d1jmxb_          31 YKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT   71 (346)
T ss_dssp             EEEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             EEEEEcCCC-CCcceEEECCCCCEEEEEECCCCcEEEEeCcc
Confidence            456677743 699999999999978865 4689999998754

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=94.50  E-value=0.033  Score=35.49  Aligned_cols=31  Identities=19%  Similarity=0.216  Sum_probs=28.5

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      .+|.+++|.+||+-+|+|..||.|.-|+.+.
T Consensus       292 ~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t  322 (346)
T d1jmxb_         292 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT  322 (346)
T ss_dssp             SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred             CCEEEEEEcCCCCEEEEEeCCCcEEEEECcc
Confidence            4799999999999899999999999999864

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.28  E-value=0.025  Score=40.81  Aligned_cols=39  Identities=21%  Similarity=0.147  Sum_probs=28.4

Q ss_pred             CCceeEeeCCCCccCCceEEeccCCCcceEEee-------------cceEEEEeC
Q 035894           32 GNHHLKLQLPAGVVGPESLAFDCNGKGPYAGVS-------------DGRILKWQD   73 (88)
Q Consensus        32 ~~~~~~l~l~~~v~GPESiAfD~~G~GpYTGv~-------------DGRIlR~~~   73 (88)
                      ....+.|+  +...|||||+.+++|. .|....             .|+|+.++-
T Consensus        24 ~~~C~~i~--g~~~G~EDi~~~~dg~-~~issg~~~~~~~~~~~~~~G~i~~~dl   75 (340)
T d1v04a_          24 LPNCNLVK--GIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDL   75 (340)
T ss_dssp             CSSCEECT--TCCSCCCEEEECTTSE-EEEEECCCC--------CCCCEEEEEET
T ss_pred             CCCceEcC--CCCCCcceEEECCCCc-EEEEecCccCCCCCCCCCCCCeEEEEec
Confidence            34465553  4457999999999998 776654             388888875

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=93.60  E-value=0.06  Score=37.11  Aligned_cols=36  Identities=25%  Similarity=0.336  Sum_probs=29.0

Q ss_pred             cCCceEEeccCCCcceE-EeecceEEEEeCCCCCeEEE
Q 035894           45 VGPESLAFDCNGKGPYA-GVSDGRILKWQDSKLGWTEF   81 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYT-Gv~DGRIlR~~~~~~gw~~F   81 (88)
                      ...|.+++|++|+ +|- -..+|||+||++++.....+
T Consensus        40 ~~lEG~~~D~~G~-Ly~~D~~~g~I~ri~p~g~~~~~~   76 (319)
T d2dg1a1          40 LQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRP   76 (319)
T ss_dssp             CCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE
T ss_pred             cCcEeCEECCCCC-EEEEECCCCEEEEEECCCCeEEEE
Confidence            5679999999999 775 56899999999987654443

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=93.55  E-value=0.072  Score=36.68  Aligned_cols=35  Identities=26%  Similarity=0.507  Sum_probs=28.9

Q ss_pred             CccCCceEEeccCCCcceEEee-cceEEEEeCCCCCe
Q 035894           43 GVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGW   78 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw   78 (88)
                      +..+|..+++|.+|+ +|.... +|+|.|++++++.-
T Consensus       226 ~~~~PdGl~vD~~G~-l~Va~~~~g~V~~~~p~G~~l  261 (319)
T d2dg1a1         226 GHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYPI  261 (319)
T ss_dssp             SSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCEE
T ss_pred             CccceeeeeEcCCCC-EEEEEcCCCEEEEECCCCcEE
Confidence            345799999999999 998864 79999999987533

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=93.35  E-value=0.079  Score=33.78  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             eEeeCCCCccCCceEEeccCCCcceEEee-cceEEEEeCC
Q 035894           36 LKLQLPAGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDS   74 (88)
Q Consensus        36 ~~l~l~~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~   74 (88)
                      +.+..+   ..|.++||+|||+-+|++.. ||+|..|+-+
T Consensus        31 ~~~~~~---~~v~~la~spDG~~L~v~~~~d~~i~~~~i~   67 (333)
T d1ri6a_          31 QVVDVP---GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA   67 (333)
T ss_dssp             EEEECS---SCCCCEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEEcCC---CCEeEEEEeCCCCEEEEEECCCCeEEEEEEe
Confidence            344554   36899999999998998876 7988877643

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.82  E-value=0.14  Score=33.72  Aligned_cols=39  Identities=18%  Similarity=0.251  Sum_probs=31.2

Q ss_pred             CCccCCceEEeccCCCcceEEee-cceEEEEeCCCCCeEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAGVS-DGRILKWQDSKLGWTEF   81 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTGv~-DGRIlR~~~~~~gw~~F   81 (88)
                      .+...|..+++|++|. +|.+-. .+||+|+..++.....+
T Consensus       179 ~~~~~p~gi~~d~~g~-l~vsd~~~~~i~~~~~~~~~~~~~  218 (260)
T d1rwia_         179 TDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVL  218 (260)
T ss_dssp             SSCCSEEEEEECTTCC-EEEEETTTTEEEEECTTCSCCEEC
T ss_pred             cccCCCccceeeeeee-eeeeecCCCEEEEEeCCCCeEEEE
Confidence            3567899999999999 998765 78999999876655544

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.76  E-value=0.14  Score=34.03  Aligned_cols=41  Identities=7%  Similarity=0.008  Sum_probs=30.5

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEe--ecceEEEEeCCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGV--SDGRILKWQDSKL   76 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv--~DGRIlR~~~~~~   76 (88)
                      ...+..++....|++||+|++|+ +|..-  .++||.+++++++
T Consensus       190 ~~~~g~~g~~~~P~giavD~~G~-i~Vad~~~~~~v~~f~~~G~  232 (279)
T d1q7fa_         190 LRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQ  232 (279)
T ss_dssp             EEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSC
T ss_pred             eeeecccccccCCcccccccCCe-EEEEECCCCcEEEEECCCCC
Confidence            44455556677899999999999 88764  3457888887764

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.60  E-value=0.074  Score=35.53  Aligned_cols=33  Identities=12%  Similarity=0.214  Sum_probs=26.9

Q ss_pred             CccCCceEEeccCCCcceEE-eecceEEEEeCCCC
Q 035894           43 GVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSKL   76 (88)
Q Consensus        43 ~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~~   76 (88)
                      +..-|..||+|++|+ +|.. ....||.+|+.++.
T Consensus        21 ~f~~P~gvavd~dg~-i~VaD~~n~rI~v~d~~G~   54 (279)
T d1q7fa_          21 QFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGR   54 (279)
T ss_dssp             CBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSC
T ss_pred             eECCccEEEEcCCCC-EEEEECCCCEEEEEeCCCC
Confidence            345699999999999 8866 46789999998764

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.52  E-value=0.16  Score=35.21  Aligned_cols=38  Identities=11%  Similarity=-0.111  Sum_probs=31.1

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      +.+++..   .+|.+++|.|||+=+|++..||.|..|+-..
T Consensus        55 ~~~l~~g---~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t   92 (426)
T d1hzua2          55 VKVIDTG---YAVHISRMSASGRYLLVIGRDARIDMIDLWA   92 (426)
T ss_dssp             EEEEECC---SSEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred             EEEEeCC---CCeeEEEECCCCCEEEEEeCCCCEEEEEccC
Confidence            3455542   4799999999999899999999999998753

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=92.52  E-value=0.085  Score=33.01  Aligned_cols=38  Identities=11%  Similarity=0.181  Sum_probs=29.9

Q ss_pred             eeEeeCCCCccCCceEEeccCCCcce-EEeecceEEEEeCCC
Q 035894           35 HLKLQLPAGVVGPESLAFDCNGKGPY-AGVSDGRILKWQDSK   75 (88)
Q Consensus        35 ~~~l~l~~~v~GPESiAfD~~G~GpY-TGv~DGRIlR~~~~~   75 (88)
                      .++++++   .+|.++||++||+=+| ++..||+|..|+...
T Consensus        25 ~~~i~~g---~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t   63 (301)
T d1l0qa2          25 TATIPVG---SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT   63 (301)
T ss_dssp             EEEEECS---SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT
T ss_pred             EEEEECC---CCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence            4566664   3799999999998677 566899999998754

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=92.50  E-value=0.055  Score=37.51  Aligned_cols=32  Identities=13%  Similarity=0.155  Sum_probs=26.9

Q ss_pred             cCCceEEeccCCCcceEEe-ecceEEEEeCCCCC
Q 035894           45 VGPESLAFDCNGKGPYAGV-SDGRILKWQDSKLG   77 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv-~DGRIlR~~~~~~g   77 (88)
                      .+|..+|+|.+|+ +|.+. ..|+|.||++++..
T Consensus       226 ~~pdGiavD~~Gn-lyVa~~~~g~I~~~dp~~g~  258 (314)
T d1pjxa_         226 GGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQ  258 (314)
T ss_dssp             CEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBS
T ss_pred             ccceeeEEecCCc-EEEEEcCCCEEEEEeCCCCE
Confidence            3799999999999 99875 57899999987543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=92.22  E-value=0.053  Score=33.99  Aligned_cols=31  Identities=19%  Similarity=0.176  Sum_probs=25.9

Q ss_pred             cCCceEEeccCCCcce-EEeecceEEEEeCCC
Q 035894           45 VGPESLAFDCNGKGPY-AGVSDGRILKWQDSK   75 (88)
Q Consensus        45 ~GPESiAfD~~G~GpY-TGv~DGRIlR~~~~~   75 (88)
                      ..|.++||++||+-+| ++..||+|..|+...
T Consensus       244 ~~~~~va~spdg~~l~va~~~~~~i~v~D~~t  275 (301)
T d1l0qa2         244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT  275 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             CCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence            4789999999998788 556789999999754

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.90  E-value=0.35  Score=31.66  Aligned_cols=40  Identities=20%  Similarity=0.419  Sum_probs=31.5

Q ss_pred             CCccCCceEEeccCCCcceEE-eecceEEEEeCCCCCeEEEE
Q 035894           42 AGVVGPESLAFDCNGKGPYAG-VSDGRILKWQDSKLGWTEFA   82 (88)
Q Consensus        42 ~~v~GPESiAfD~~G~GpYTG-v~DGRIlR~~~~~~gw~~FA   82 (88)
                      .+...|.+|++|++|+ +|.. ..+++|.+++.++.....+.
T Consensus       137 ~~~~~p~~i~~~~~g~-~~v~~~~~~~i~~~d~~~~~~~~~~  177 (260)
T d1rwia_         137 TGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVLP  177 (260)
T ss_dssp             CSCCSCCEEEECTTCC-EEEEEGGGTEEEEECTTTCCEEECC
T ss_pred             cccCCcceeeecCCCC-Eeeeccccccccccccccceeeeee
Confidence            3567999999999999 6655 67789999998876655543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.75  E-value=0.14  Score=31.68  Aligned_cols=28  Identities=32%  Similarity=0.381  Sum_probs=25.0

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      .+++|+|+|+-+.||..||.|.-|+.+.
T Consensus       255 ~~l~~sp~~~~lasg~~Dg~v~vWD~~~  282 (342)
T d1yfqa_         255 NSIEFSPRHKFLYTAGSDGIISCWNLQT  282 (342)
T ss_dssp             EEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred             eeEEecCCccEEEEECCCCEEEEEECCC
Confidence            4789999998899999999999999764

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.80  E-value=0.2  Score=30.89  Aligned_cols=35  Identities=11%  Similarity=0.058  Sum_probs=27.9

Q ss_pred             eEeeCCCCccCC----ceEEeccCCCcceEEeecceEEEEeC
Q 035894           36 LKLQLPAGVVGP----ESLAFDCNGKGPYAGVSDGRILKWQD   73 (88)
Q Consensus        36 ~~l~l~~~v~GP----ESiAfD~~G~GpYTGv~DGRIlR~~~   73 (88)
                      +.|.+.   ++|    -+|+|.|+|+=+.||..||.|.-|+-
T Consensus         2 ~~v~~~---~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~   40 (342)
T d1yfqa_           2 QIVQIE---QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKF   40 (342)
T ss_dssp             EEEECS---SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEE
T ss_pred             CeEEcC---CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEc
Confidence            445553   577    46899999988999999999988875

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=88.77  E-value=0.3  Score=30.93  Aligned_cols=30  Identities=17%  Similarity=0.192  Sum_probs=22.5

Q ss_pred             cCCceEEeccCCCcceEEeec-ce--EEEEeCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSD-GR--ILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~D-GR--IlR~~~~   74 (88)
                      ..|.++||+|||+=+|.+-.| +.  |++++..
T Consensus       276 ~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~  308 (333)
T d1ri6a_         276 TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE  308 (333)
T ss_dssp             SSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred             CCeeEEEEeCCCCEEEEEECCCCeEEEEEEECC
Confidence            479999999999988987654 54  4555653

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.23  E-value=0.27  Score=31.28  Aligned_cols=30  Identities=20%  Similarity=0.249  Sum_probs=26.0

Q ss_pred             CceEEeccCCCcceEEeecceEEEEeCCCC
Q 035894           47 PESLAFDCNGKGPYAGVSDGRILKWQDSKL   76 (88)
Q Consensus        47 PESiAfD~~G~GpYTGv~DGRIlR~~~~~~   76 (88)
                      ..+++|.+||+-++++..||.|..|+-+..
T Consensus       317 v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~  346 (360)
T d1k32a3         317 LTDLRLSADRKTVMVRKDDGKIYTFPLEKP  346 (360)
T ss_dssp             EEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred             cCEEEECCCCCEEEEEECCCeEEEEECCCC
Confidence            458899999988999999999999986543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.06  E-value=0.21  Score=30.47  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=22.3

Q ss_pred             ceEEeccCCCcceEEeecceEEEEe
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQ   72 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~   72 (88)
                      -+++|.++|+-++||..||.|.-|+
T Consensus       293 ~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         293 TSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            5689999998899999999998885

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=87.87  E-value=0.35  Score=34.28  Aligned_cols=30  Identities=10%  Similarity=0.026  Sum_probs=27.3

Q ss_pred             cCCceEEeccCCCcceEEeecceEEEEeCC
Q 035894           45 VGPESLAFDCNGKGPYAGVSDGRILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~DGRIlR~~~~   74 (88)
                      .+|.+++|.|||+=+|++..||.|..|+..
T Consensus        62 ~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~   91 (432)
T d1qksa2          62 YAVHISRLSASGRYLFVIGRDGKVNMIDLW   91 (432)
T ss_dssp             SCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred             CCeeEEEECCCCCEEEEEcCCCCEEEEEee
Confidence            479999999999999999999999999863

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.73  E-value=0.21  Score=31.35  Aligned_cols=25  Identities=20%  Similarity=0.320  Sum_probs=22.6

Q ss_pred             ceEEeccCCCcceEEeecceEEEEe
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQ   72 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~   72 (88)
                      .+++|.++|.=++||..||.|.-|+
T Consensus       316 ~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         316 SCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEeCCCCEEEEEccCCEEEEeC
Confidence            6789999998799999999999885

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.13  E-value=0.27  Score=30.78  Aligned_cols=28  Identities=11%  Similarity=0.396  Sum_probs=25.1

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      -+++|.++|.=+.||..||.|.-|+...
T Consensus        59 ~~l~~s~~~~~l~sgs~Dg~v~iWd~~~   86 (340)
T d1tbga_          59 YAMHWGTDSRLLVSASQDGKLIIWDSYT   86 (340)
T ss_dssp             EEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred             EEEEECCCCCEEEEEECCCceeeeeccc
Confidence            5789999998899999999999998754

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=86.38  E-value=0.29  Score=30.93  Aligned_cols=29  Identities=24%  Similarity=0.463  Sum_probs=25.1

Q ss_pred             CCceEEeccCCCcceEEeecceEEEEeCC
Q 035894           46 GPESLAFDCNGKGPYAGVSDGRILKWQDS   74 (88)
Q Consensus        46 GPESiAfD~~G~GpYTGv~DGRIlR~~~~   74 (88)
                      +=.+++|.++|+=++||..||.|.-|+-.
T Consensus        14 ~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~   42 (299)
T d1nr0a2          14 AITALSSSADGKTLFSADAEGHINSWDIS   42 (299)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CcEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            34578999999889999999999999864

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.92  E-value=0.54  Score=28.56  Aligned_cols=27  Identities=15%  Similarity=0.118  Sum_probs=24.1

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDS   74 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~   74 (88)
                      -+++|+++|.=+.||..||.|.-|+-+
T Consensus        21 ~~l~~sp~~~~l~s~s~Dg~i~iWd~~   47 (317)
T d1vyhc1          21 TRVIFHPVFSVMVSASEDATIKVWDYE   47 (317)
T ss_dssp             EEEEECSSSSEEEEEESSSCEEEEETT
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            578999999889999999999999864

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=83.73  E-value=0.62  Score=34.15  Aligned_cols=33  Identities=18%  Similarity=0.163  Sum_probs=27.1

Q ss_pred             cCCceEEeccCCCcceEEeec---------------------------------ceEEEEeCCCCCe
Q 035894           45 VGPESLAFDCNGKGPYAGVSD---------------------------------GRILKWQDSKLGW   78 (88)
Q Consensus        45 ~GPESiAfD~~G~GpYTGv~D---------------------------------GRIlR~~~~~~gw   78 (88)
                      +.=-.|+|++||. +|-++.|                                 |+|+|++.++..+
T Consensus       144 H~gg~l~fgpDG~-LYvs~Gd~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~Gkilri~~dg~~~  209 (450)
T d1crua_         144 HQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP  209 (450)
T ss_dssp             CCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC
T ss_pred             ccccceeEcCCCC-EEEEecCCCcccccccccccccccCcccccccccccccccCceEEeecccccc
Confidence            3345899999999 9999887                                 9999999877543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.91  E-value=0.5  Score=31.82  Aligned_cols=28  Identities=25%  Similarity=0.415  Sum_probs=25.2

Q ss_pred             ceEEeccCCCcceEEeecceEEEEeCCC
Q 035894           48 ESLAFDCNGKGPYAGVSDGRILKWQDSK   75 (88)
Q Consensus        48 ESiAfD~~G~GpYTGv~DGRIlR~~~~~   75 (88)
                      .+++|.++|+-+++|..||.|.-|+-..
T Consensus       293 ~~l~fspd~~~l~S~s~D~~v~vWd~~~  320 (393)
T d1sq9a_         293 MSLSFNDSGETLCSAGWDGKLRFWDVKT  320 (393)
T ss_dssp             EEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             eeeccCCCCCeeEEECCCCEEEEEECCC
Confidence            5689999999899999999999999754

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=82.61  E-value=0.94  Score=29.37  Aligned_cols=30  Identities=7%  Similarity=0.155  Sum_probs=25.2

Q ss_pred             cCCceEEeccCCCc-ce-EEeecceEEEEeCC
Q 035894           45 VGPESLAFDCNGKG-PY-AGVSDGRILKWQDS   74 (88)
Q Consensus        45 ~GPESiAfD~~G~G-pY-TGv~DGRIlR~~~~   74 (88)
                      .+|.+++|.+||+. +| ++-.||.|.-|+-.
T Consensus       318 ~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~  349 (373)
T d2madh_         318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAG  349 (373)
T ss_pred             CCeeEEEECCCCCEEEEEEeCCCCeEEEEECC
Confidence            57999999999986 35 68889999999874