Citrus Sinensis ID: 035921

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MARIKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHcccccccccccccccHcccccEEHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHcHHHHEEcEEEccccEEEEEccccccccHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MARIKAAVLVYVAVILLLSTcapisycakkpvagarkedvpyitCQVCEKLASQLYHQVQKKqaqispkkiseFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEaegqcnseCKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDlskacstkpppvlknripgepfvpkpakeAEMERIMRSmegmpgapgmqmyskEDLMnmknfggedgddnddeddddesdfpknlgkvfrekesksgdwkqritDGILNTGDVLKKQANKVSNHVQRWWSGIKaarskkpgktel
Flexible Loop (DISEMBL)
MARIKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKqaqispkkisEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEaegqcnsecKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSkacstkpppvlknripgepfvpkpaKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESdfpknlgkvfrekesksgdwkqritdgILNTGDVLKKQANkvsnhvqrwwsgikaarskkpgktel
Low Complexity Region (SEG)
MARIKaavlvyvavilllSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFggedgddnddeddddesdFPKNLGKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL
Disordered region (IsUnstruct)
***IKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKAC***********************************************************************************************QRITDGILNTGDVLKKQANKVSNHVQRWWSGI*************
Disordered Region (DISOPRED)
****KAAVLVYVAVILLLSTC***************KEDVPYITCQVCEKLASQLYHQ*****************IIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQE**GQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSK********************************************************************************************************************KVSNHVQ*******************
Disordered Region (DISEMBL)
MARIKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQL************PKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGED*************DFPKNLGKVFR*********KQRITDGILNTGDVLKKQANKVSNHVQRWWSGIK************
Disordered Region (DISPRO)
MARIKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPP*********E***************************************K******************SDFPKNLGKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIK************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARIKAAVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
225444981	304	PREDICTED: uncharacterized protein LOC10	0.960	0.963	0.694	1e-113
297738696	301	unnamed protein product [Vitis vinifera]	0.960	0.973	0.694	1e-113
356498081	303	PREDICTED: uncharacterized protein LOC10	0.927	0.933	0.724	1e-110
356520856	300	PREDICTED: uncharacterized protein LOC10	0.924	0.94	0.720	1e-109
449528651	300	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.918	0.933	0.702	1e-109
357501185	301	hypothetical protein MTR_6g091780 [Medic	0.977	0.990	0.673	1e-108
449435830	294	PREDICTED: uncharacterized protein LOC10	0.904	0.938	0.700	1e-108
217071942	301	unknown [Medicago truncatula]	0.977	0.990	0.67	1e-107
224122586	305	predicted protein [Populus trichocarpa]	0.908	0.908	0.650	1e-104
357501049	286	hypothetical protein MTR_6g090810 [Medic	0.927	0.989	0.64	9e-99

>gi|225444981|ref|XP_002282754.1| PREDICTED: uncharacterized protein LOC100249262 [Vitis vinifera]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/298 (69%), Positives = 243/298 (81%), Gaps = 5/298 (1%)

Query: 7   AVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQI 66
            ++V V  IL++ST   +S+C+KKPV  AR++D+PYI CQVCEKLA+QLYHQV+KKQAQI
Sbjct: 8   TIIVLVFSILVISTWLQVSHCSKKPVGVARRDDIPYIKCQVCEKLAAQLYHQVEKKQAQI 67

Query: 67  SPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIER 126
           SPKKISEFEII I+ENVCNLKKEEADWIL+IDIVEQGDKL LVEQ++EGQCNSECKTIER
Sbjct: 68  SPKKISEFEIIEISENVCNLKKEEADWILRIDIVEQGDKLKLVEQDSEGQCNSECKTIER 127

Query: 127 ACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKP 186
           ACQE+MGYSDTD AEY+Y +KP I SLVNYLCKDL+KACS  PPPV K+R PGEPFVPK 
Sbjct: 128 ACQEVMGYSDTDAAEYVYKNKPQIDSLVNYLCKDLTKACSASPPPVPKDRTPGEPFVPKS 187

Query: 187 AKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLG 246
            KEAEME+IM+SMEGMPGAPGM+MYS+EDLMNM+NF    GD++ D+DDDDE  FP  LG
Sbjct: 188 LKEAEMEKIMKSMEGMPGAPGMKMYSREDLMNMQNF----GDEDADDDDDDEPHFPSKLG 243

Query: 247 KVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTE 304
           K  R KES   DWK  +T GI  TG  LK+ A++VSN +++WW G K   SKK  K  
Sbjct: 244 KNLRAKESTKPDWKHTVTKGIKETGQALKRHASRVSNQIRQWWRG-KITSSKKNSKAH 300

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738696|emb|CBI27941.3| unnamed protein product [Vitis vinifera]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/298 (69%), Positives = 243/298 (81%), Gaps = 5/298 (1%)

Query: 7   AVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQI 66
            ++V V  IL++ST   +S+C+KKPV  AR++D+PYI CQVCEKLA+QLYHQV+KKQAQI
Sbjct: 5   TIIVLVFSILVISTWLQVSHCSKKPVGVARRDDIPYIKCQVCEKLAAQLYHQVEKKQAQI 64

Query: 67  SPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIER 126
           SPKKISEFEII I+ENVCNLKKEEADWIL+IDIVEQGDKL LVEQ++EGQCNSECKTIER
Sbjct: 65  SPKKISEFEIIEISENVCNLKKEEADWILRIDIVEQGDKLKLVEQDSEGQCNSECKTIER 124

Query: 127 ACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKP 186
           ACQE+MGYSDTD AEY+Y +KP I SLVNYLCKDL+KACS  PPPV K+R PGEPFVPK 
Sbjct: 125 ACQEVMGYSDTDAAEYVYKNKPQIDSLVNYLCKDLTKACSASPPPVPKDRTPGEPFVPKS 184

Query: 187 AKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLG 246
            KEAEME+IM+SMEGMPGAPGM+MYS+EDLMNM+NF    GD++ D+DDDDE  FP  LG
Sbjct: 185 LKEAEMEKIMKSMEGMPGAPGMKMYSREDLMNMQNF----GDEDADDDDDDEPHFPSKLG 240

Query: 247 KVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTE 304
           K  R KES   DWK  +T GI  TG  LK+ A++VSN +++WW G K   SKK  K  
Sbjct: 241 KNLRAKESTKPDWKHTVTKGIKETGQALKRHASRVSNQIRQWWRG-KITSSKKNSKAH 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498081|ref|XP_003517882.1| PREDICTED: uncharacterized protein LOC100778421 [Glycine max]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/283 (72%), Positives = 241/283 (85%)

Query: 23  PISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAEN 82
           P+S+C+KKPV  ARKED+PYI CQVCEKLA +LY QVQ KQA+I+PKKISE++II IAEN
Sbjct: 21  PLSHCSKKPVGVARKEDIPYIKCQVCEKLAKELYQQVQNKQAEIAPKKISEYQIIEIAEN 80

Query: 83  VCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEY 142
           VCNLKK EADWIL+IDIVE+ D+L LVEQ++EGQCNSECKTIERACQE++GYSDTDVAEY
Sbjct: 81  VCNLKKVEADWILRIDIVEKEDRLELVEQDSEGQCNSECKTIERACQEVIGYSDTDVAEY 140

Query: 143 LYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGM 202
           LY SKPDI SL NYLCKDLSKACS+KPPPV K+R PGEPFV K +KEAEME++++SMEGM
Sbjct: 141 LYNSKPDIDSLRNYLCKDLSKACSSKPPPVPKDRAPGEPFVAKSSKEAEMEKLLKSMEGM 200

Query: 203 PGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWKQR 262
           PGAPGM+MYS++DLMNMKNFGGEDGD+ D++DDDDE+ FP  LG V R KES   DWKQ 
Sbjct: 201 PGAPGMKMYSRDDLMNMKNFGGEDGDEEDEDDDDDEASFPSKLGNVLRAKESGKRDWKQM 260

Query: 263 ITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL 305
           +  GI +    LKK ANKVSNH+++WW G +   SKK GKTEL
Sbjct: 261 VKKGIEDASMTLKKHANKVSNHIRQWWRGKRRTNSKKGGKTEL 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520856|ref|XP_003529076.1| PREDICTED: uncharacterized protein LOC100782313 [Glycine max]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/283 (72%), Positives = 240/283 (84%), Gaps = 1/283 (0%)

Query: 23  PISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAEN 82
           P S+C+KKPV  ARKED+ YI CQVCEKLA +LY QVQ KQA+I+PKKISE++II IAEN
Sbjct: 19  PFSHCSKKPVGVARKEDIQYIKCQVCEKLAKELYQQVQNKQAEIAPKKISEYQIIEIAEN 78

Query: 83  VCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEY 142
           VCNLKK EADWIL+IDIVE+ D+L LVEQ++EGQCNSECKTIERACQE++GYSDTDVAEY
Sbjct: 79  VCNLKKAEADWILRIDIVEKEDRLELVEQDSEGQCNSECKTIERACQEVIGYSDTDVAEY 138

Query: 143 LYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGM 202
           LY+SKPDI SL NYLCKDL+ ACSTKPPPV K+R PGEPFV K +KEAEME++++SMEGM
Sbjct: 139 LYSSKPDIDSLRNYLCKDLTNACSTKPPPVPKDRAPGEPFVAKSSKEAEMEKLLKSMEGM 198

Query: 203 PGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWKQR 262
           PGAPGM+MYS++DLMNMKNFG EDGDD D++D+++ S FP  LGKV R KES+  DWKQ 
Sbjct: 199 PGAPGMKMYSRDDLMNMKNFGDEDGDDEDEDDNEEAS-FPSKLGKVLRAKESEKRDWKQV 257

Query: 263 ITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL 305
           I  GI +T   LKK ANKVSNH+++WW G K   SKK GKTEL
Sbjct: 258 IKKGIEDTSMTLKKHANKVSNHIRQWWRGKKITNSKKGGKTEL 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528651|ref|XP_004171317.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206912 [Cucumis sativus]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/286 (70%), Positives = 235/286 (82%), Gaps = 6/286 (2%)

Query: 23  PISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISE--FEIIGIA 80
           P   C+KKP A ARKED+PYI CQVCEKLA++LYHQV+KKQA+I+PKK S     II IA
Sbjct: 18  PTFECSKKPSAAARKEDIPYIKCQVCEKLAAELYHQVEKKQAEIAPKKYSSVVIXIIEIA 77

Query: 81  ENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVA 140
           ENVCNLKK EADWIL+IDIVEQGDKL LV+Q  EGQCNSECKTIERACQE+MGYSDTDVA
Sbjct: 78  ENVCNLKKAEADWILQIDIVEQGDKLELVDQNTEGQCNSECKTIERACQEVMGYSDTDVA 137

Query: 141 EYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSME 200
           EYLY+SKP I SLVNYLCKDL+K+C+TKPPPV K+R PGEPFV K +KEAEME++MRSME
Sbjct: 138 EYLYSSKPKIDSLVNYLCKDLTKSCTTKPPPVPKDRTPGEPFVAKSSKEAEMEKMMRSME 197

Query: 201 GMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWK 260
           GMPGAPGM+MYS++DLMNMKNFGGE   D+D+E++++E +FP NLGKV REKE K+ DWK
Sbjct: 198 GMPGAPGMKMYSRDDLMNMKNFGGE---DDDEEEEEEEENFPSNLGKVLREKERKNNDWK 254

Query: 261 QRITDGILNTGDVLKKQANKVSNHVQRWWSG-IKAARSKKPGKTEL 305
            RIT G+   G+ LK+ A KVSN V+ WW       +S KP K EL
Sbjct: 255 NRITKGVSKAGEALKQHAYKVSNKVRHWWRAKTGGLKSSKPTKQEL 300

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501185|ref|XP_003620881.1| hypothetical protein MTR_6g091780 [Medicago truncatula] gi|355495896|gb|AES77099.1| hypothetical protein MTR_6g091780 [Medicago truncatula]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/300 (67%), Positives = 249/300 (83%), Gaps = 2/300 (0%)

Query: 7   AVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQI 66
            V  ++ V +++++  P+S+CAKKPV  ARKEDVPYI CQVCE LA QLY QVQ K+A+I
Sbjct: 3   GVFWFLVVSVVIASWIPLSHCAKKPVGIARKEDVPYIKCQVCEILAKQLYQQVQSKKAEI 62

Query: 67  SPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIER 126
           SPKKISE++II IAENVCNLKK EADWIL+IDIVE+ D+L L E ++EGQCNSECKT+ER
Sbjct: 63  SPKKISEYQIIEIAENVCNLKKVEADWILRIDIVEKADRLELEEHDSEGQCNSECKTVER 122

Query: 127 ACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKP 186
           ACQE+MGYSDTDVAEYLY+SKPDI SL NYLCKDLSKAC+TKPPPV K+R PGEPFV K 
Sbjct: 123 ACQEVMGYSDTDVAEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKS 182

Query: 187 AKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGED-GDDNDDEDDDDESDFPKNL 245
           +KEAEME++++SMEGMPGAPGM+MYS++DLM  KNFG E+  DD D+++++DE+DFP  L
Sbjct: 183 SKEAEMEKLLKSMEGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKL 241

Query: 246 GKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL 305
           GK+ + KE++ GDWKQ+I  GI++T   LKK A KVSNH+QRWW G K   SKK  K+EL
Sbjct: 242 GKILKSKENEKGDWKQKIRKGIVDTSTTLKKHATKVSNHIQRWWKGKKTTSSKKNSKSEL 301

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435830|ref|XP_004135697.1| PREDICTED: uncharacterized protein LOC101206912 [Cucumis sativus]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/284 (70%), Positives = 232/284 (81%), Gaps = 8/284 (2%)

Query: 23  PISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAEN 82
           P   C+KKP A ARKED+PYI CQVCEKLA++LYHQV+KKQA+I+PKKISE++II IAEN
Sbjct: 18  PTFECSKKPSAAARKEDIPYIKCQVCEKLAAELYHQVEKKQAEIAPKKISEYQIIEIAEN 77

Query: 83  VCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEY 142
           VCNLKK EADWIL+IDIVEQGDKL LV+Q  EGQCNSECKTIERACQE+MGYSDTDVAEY
Sbjct: 78  VCNLKKAEADWILQIDIVEQGDKLELVDQNTEGQCNSECKTIERACQEVMGYSDTDVAEY 137

Query: 143 LYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSMEGM 202
           LY+SKP I SLVNYLCKDL+K+C+TKPPPV K+R PGEPFV K +KEAEME++MRSMEGM
Sbjct: 138 LYSSKPKIDSLVNYLCKDLTKSCTTKPPPVPKDRTPGEPFVAKSSKEAEMEKMMRSMEGM 197

Query: 203 PGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWKQR 262
           PGAPGM+MYS++DLMNMKNFGGED D+ ++E+          LGKV REKE K+ DWK R
Sbjct: 198 PGAPGMKMYSRDDLMNMKNFGGEDDDEEEEENIF-------YLGKVLREKERKNNDWKNR 250

Query: 263 ITDGILNTGDVLKKQANKVSNHVQRWWSG-IKAARSKKPGKTEL 305
           IT G+   G+ LK+ A KVSN V+ WW       +S KP K EL
Sbjct: 251 ITKGVSKAGEALKQHAYKVSNKVRHWWRAKTGGLKSSKPTKQEL 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071942|gb|ACJ84331.1| unknown [Medicago truncatula]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/300 (67%), Positives = 248/300 (82%), Gaps = 2/300 (0%)

Query: 7   AVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQI 66
            V  ++ V +++++  P+S+CAKKPV  ARKEDVPYI CQVCE LA QLY QVQ K+A+I
Sbjct: 3   GVFWFLVVSVVIASWIPLSHCAKKPVGIARKEDVPYIKCQVCEILAKQLYQQVQSKKAEI 62

Query: 67  SPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIER 126
           SPKKISE++II IAENVCNLKK EADWIL+IDIVE+ D+L L E ++EGQCNSE KT+ER
Sbjct: 63  SPKKISEYQIIEIAENVCNLKKVEADWILRIDIVEKADRLELEEHDSEGQCNSEYKTVER 122

Query: 127 ACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKP 186
           ACQE+MGYSDTDVAEYLY+SKPDI SL NYLCKDLSKAC+TKPPPV K+R PGEPFV K 
Sbjct: 123 ACQEVMGYSDTDVAEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKS 182

Query: 187 AKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGED-GDDNDDEDDDDESDFPKNL 245
           +KEAEME++++SMEGMPGAPGM+MYS++DLM  KNFG E+  DD D+++++DE+DFP  L
Sbjct: 183 SKEAEMEKLLKSMEGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKL 241

Query: 246 GKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL 305
           GK+ + KE++ GDWKQ+I  GI++T   LKK A KVSNH+QRWW G K   SKK  K+EL
Sbjct: 242 GKILKSKENEKGDWKQKIRKGIVDTSTTLKKHATKVSNHIQRWWKGKKTTSSKKNSKSEL 301

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122586|ref|XP_002330518.1| predicted protein [Populus trichocarpa] gi|222872452|gb|EEF09583.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/283 (65%), Positives = 231/283 (81%), Gaps = 6/283 (2%)

Query: 23  PISYCAK--KPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIA 80
           P+S  AK  KP+  ARK+D+PYI CQVCEK+ASQLY Q QKKQ QISP+KISE+++I IA
Sbjct: 22  PVSESAKTDKPLIVARKDDIPYIKCQVCEKVASQLYRQAQKKQDQISPQKISEYQVIEIA 81

Query: 81  ENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVA 140
           ENVCNLKKEEADWI+K+DI+EQGDKL L+EQ+ EGQCNSECKTIE+ CQ++M Y DTDVA
Sbjct: 82  ENVCNLKKEEADWIMKLDIMEQGDKLELIEQDTEGQCNSECKTIEQTCQQVMDYVDTDVA 141

Query: 141 EYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRSME 200
           EY+YT+KP I  LV +LCKDL+ +C+ KPPPV KNR+PGEPFVPKP+KE EME+IMRSME
Sbjct: 142 EYIYTTKPQIDLLVKHLCKDLTNSCTKKPPPVPKNRMPGEPFVPKPSKEVEMEKIMRSME 201

Query: 201 GMPGAPGMQMYSKEDLMNMKNFGGEDGDDNDDEDDDDESDFPKNLGKVFREKESKSGDWK 260
           GMPGAPGM+MYS+EDLM M NF    G+++ +++DD++  FP N+GKV REK+    DWK
Sbjct: 202 GMPGAPGMKMYSREDLMGMNNF----GNEDAEDEDDEDEQFPSNMGKVLREKQDMKDDWK 257

Query: 261 QRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKT 303
           Q+I +GI +T + LK+  N VS  +Q+WW GI+AA +KK  KT
Sbjct: 258 QKIFEGIKSTAEALKRHTNIVSKQIQKWWKGIRAAPAKKNSKT 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501049|ref|XP_003620813.1| hypothetical protein MTR_6g090810 [Medicago truncatula] gi|355495828|gb|AES77031.1| hypothetical protein MTR_6g090810 [Medicago truncatula]

 Score =  366 bits (939), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 192/300 (64%), Positives = 237/300 (79%), Gaps = 17/300 (5%)

Query: 7   AVLVYVAVILLLSTCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQI 66
            V   + V +++++  P+S+CAKKPV  ARKEDVPYI CQVCE LA QLY QVQ K+A+I
Sbjct: 3   GVFWLLVVSVVIASWIPLSHCAKKPVGIARKEDVPYIKCQVCEILAKQLYQQVQSKKAEI 62

Query: 67  SPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIER 126
           SPKKISE++II IAENVCNLKK EADWIL+IDIVE+ D+L               +T+ER
Sbjct: 63  SPKKISEYQIIEIAENVCNLKKVEADWILRIDIVEKADRL---------------ETVER 107

Query: 127 ACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKP 186
           ACQE++GYSDTDVAEYLY+SKPDI SL NYLCKDLSKAC+TKPPPV K+R PGEPFV K 
Sbjct: 108 ACQEVLGYSDTDVAEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKS 167

Query: 187 AKEAEMERIMRSMEGMPGAPGMQMYSKEDLMNMKNFGGED-GDDNDDEDDDDESDFPKNL 245
           +KEAEME++++SMEGMPGAPGM+MYS++DLM  KNFG E+  DD D+++++DE+DFP  L
Sbjct: 168 SKEAEMEKLLKSMEGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKL 226

Query: 246 GKVFREKESKSGDWKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKPGKTEL 305
           GKV + KE++ GDWKQ+I  GI++TG  LKK A KVSNH+QRWW G K   SKK  K+EL
Sbjct: 227 GKVLKSKENEKGDWKQKIRKGIVDTGTTLKKHATKVSNHIQRWWKGKKTTSSKKNSKSEL 286

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
TAIR|locus:2134348	306	AT4G29520 "AT4G29520" [Arabido	0.937	0.934	0.629	5.9e-96

TAIR|locus:2134348 AT4G29520 "AT4G29520" [Arabidopsis thaliana (taxid:3702)]

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 182/289 (62%), Positives = 224/289 (77%)

Query:    19 STCAPISYCAKKPVAGARKEDVPYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIG 78
             S   P+S  AKKP +  RKEDVPYI CQVCEKL+S+L+  V++KQ QISPKKISE+EII 
Sbjct:    19 SALLPVSDAAKKPSSTPRKEDVPYIKCQVCEKLSSRLHQLVKEKQQQISPKKISEYEIIE 78

Query:    79 IAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTD 138
             IAENVCNLKKEEADW+LKIDIVE+GD LVLVEQ+ EG CNS+CKTIE ACQ+++GYSDTD
Sbjct:    79 IAENVCNLKKEEADWMLKIDIVEKGDNLVLVEQQEEGMCNSKCKTIENACQKVIGYSDTD 138

Query:   139 VAEYLYTSKPDIKSLVNYLCKDLSKACSTKPPPVLKNRIPGEPFVPKPAKEAEMERIMRS 198
             VAEY+Y SKPD+ SLVN+LCKDL+ ACS KPPPV K+R+PGEPFV KP+K+AEM++I+RS
Sbjct:   139 VAEYIYKSKPDLVSLVNHLCKDLTDACSKKPPPVPKDRVPGEPFVAKPSKDAEMDKILRS 198

Query:   199 MEGMPGAPGMQMYSKEDLMNMKNFXXXXXXXXXXXXXXXXXXFPKNLGKVFREKESKSGD 258
             M+GMPGAPGM++YS+ED+    N                   FPKNLGKV +EKESK+ +
Sbjct:   199 MQGMPGAPGMKVYSREDI-EKGNIGNEDDDGDDDEDEEEDDKFPKNLGKVLKEKESKTEE 257

Query:   259 WKQRITDGILNTGDVLKKQANKVSNHVQRWWSGIKAARSKKP--GKTEL 305
              K+ IT      G+ LK+ A KVSN V+RWW G+ ++ SKKP  GK+EL
Sbjct:   258 LKKTITKEFKKKGEALKRHAQKVSNRVRRWWKGLGSSSSKKPKSGKSEL 306


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      305       274   0.00078  115 3  11 23  0.40    34
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.41u 0.10s 25.51t   Elapsed:  00:00:01
  Total cpu time:  25.41u 0.10s 25.51t   Elapsed:  00:00:01
  Start:  Fri May 10 14:29:36 2013   End:  Fri May 10 14:29:37 2013

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00016597001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (299 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00025969001	SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (429 aa)				•					0.419

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
PF11938	151	DUF3456: TLR4 regulator and MIR-interacting MSAP;	98.9
KOG4052	190	consensus Uncharacterized conserved protein [Funct	95.61
PF05184	39	SapB_1: Saposin-like type B, region 1; InterPro: I	93.93
KOG3782	189	consensus Predicted membrane protein, contains typ	92.87
KOG4260	350	consensus Uncharacterized conserved protein [Funct	86.24

>PF11938 DUF3456: TLR4 regulator and MIR-interacting MSAP; InterPro: IPR021852 This family of proteins are functionally uncharacterised

Probab=98.90  E-value=2.9e-09  Score=91.68  Aligned_cols=123  Identities=23%  Similarity=0.474  Sum_probs=87.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhC---------------CC----CCchHHHHHHHHhhcCCccc-----ccchheeee
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQIS---------------PK----KISEFEIIGIAENVCNLKKE-----EADWILKID   98 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~---------------pk----Kv~E~dVie~iE~vCnp~k~-----eG~WI~~~D   98 (305)
                      -+|.||..+|.++...+..-.....               .+    +.||.-++|++|+||+...+     ...+-.++-
T Consensus         2 ~~C~~C~~l~~el~~~l~~~~~~~~v~~~~~r~d~~g~~~~~~~~y~~SE~~l~EvlE~vC~~~~~Y~~~~~~~~~~~~~   81 (151)
T PF11938_consen    2 LKCSACRALVEELEHRLAKTDPKKFVDVGGFRLDPDGERKKKKIPYARSELRLVEVLENVCEKMKDYVLHKDKSTGKRVY   81 (151)
T ss_pred             CcchHHHHHHHHHHHHHHHhCCcCceeccccccccccccccccCccccchhHHHHHHHHHccCcccceeeecCCCCceEE
Confidence            3799999999999887654322211               12    35999999999999997652     111222222


Q ss_pred             eeec---CCeeEEEeccccccccccchHHHHHHHHhhCCCCcchhhhhhccCCChHHHHHhhchhhhcccc
Q 035921           99 IVEQ---GDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACS  166 (305)
Q Consensus        99 IvEk---G~~L~lve~~~~gkC~~ECkTI~rACe~vmd~~dtDvae~L~~~~~~~~al~~~lC~d~S~aC~  166 (305)
                      +...   |....++.++....+..+.+++..+|+.|++.++.++.+++++.... ..|.+|||.+.++.|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~C~~ilEe~Ed~i~~~~~~~~~~-~~l~~~LC~~~~~~C~  151 (151)
T PF11938_consen   82 KRMSTTGGTNPELSEKDVKVDPSDENKRLKFYCERILEEYEDEIEEWFFSEQDE-DDLEEWLCSETSKVCC  151 (151)
T ss_pred             EecCCCcCcccccccccceeecHHHHhHHHHHHHHHHHHhHHHHHHHHHhcCCc-cCHHHHhhhcccccCC
Confidence            2211   22222333444445899999999999999999999999999988766 7888999999999994

This protein is found in eukaryotes. Proteins in this family are typically between 182 to 356 amino acids in length.

>KOG4052 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.61  E-value=0.015  Score=52.66  Aligned_cols=121  Identities=26%  Similarity=0.398  Sum_probs=72.7

Q ss_pred             CCCc-ccchhHHHHHHHHHHHHHHHH---hhh---------CCCC-----CchHHHHHHHHhhcCCccc-----------
Q 035921           39 DVPY-ITCQVCEKLASQLYHQVQKKQ---AQI---------SPKK-----ISEFEIIGIAENVCNLKKE-----------   89 (305)
Q Consensus        39 Dvpy-IrC~VCe~iak~ly~~v~~k~---~~~---------~pkK-----v~E~dVie~iE~vCnp~k~-----------   89 (305)
                      +|-| -+|.||-.+|-++-....+--   +-+         .+++     .||...+|+.||+|+.+-+           
T Consensus        29 ~vrlpsKCEvCkllatEleA~l~eTGks~eVi~~gy~~ld~k~k~~v~Y~rselrl~E~tEniCer~ley~~hker~gs~  108 (190)
T KOG4052|consen   29 TVRLPSKCEVCKLLATELEAKLEETGKSKEVIEHGYTRLDFKFKWFVLYQRSELRLAEITENICERFLEYKIHKERTGSE  108 (190)
T ss_pred             cccccchhHHHHHHHHHHHHHHhhcCCcceeeeeceeeecceeeeeeeeehhHhHHHHHHHHHHHHHHHHhhhccCcchh
Confidence            3444 799999999988764432110   000         2333     2899999999999997531           


Q ss_pred             -----ccchheee-eeeecCCeeEEEe-ccccccccccchHHHHHHHHhhCCCCcchhhhhhccCCChHHHHHhhchh
Q 035921           90 -----EADWILKI-DIVEQGDKLVLVE-QEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKD  160 (305)
Q Consensus        90 -----eG~WI~~~-DIvEkG~~L~lve-~~~~gkC~~ECkTI~rACe~vmd~~dtDvae~L~~~~~~~~al~~~lC~d  160 (305)
                           ..+=|.++ -+|+||.+..|.- -+---+--.|---....||-.+. ++.|+.+--|-+..+...|+|+||.+
T Consensus       109 rfaraqsqt~~tlk~l~~KGvKvdlgip~elwd~psvevt~lk~qce~lle-eyed~i~ewyf~hq~e~~l~k~lce~  185 (190)
T KOG4052|consen  109 RFARAQSQTIETLKGLVEKGVKVDLGIPFELWDQPSVEVTALKQQCESLLE-EYEDLIEEWYFNHQSEEDLFKQLCER  185 (190)
T ss_pred             HHHHHhhhHHHHHHHHHHcCceeeeCCchHhhcCCcHHHHHHHHHHHHHHH-HHHHHHHHHHhccccHHHHHHHHHHh
Confidence                 12223222 3466777655532 11112333444555667887665 56777755455556789999999953

>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes

Probab=93.93  E-value=0.05  Score=36.27  Aligned_cols=36  Identities=22%  Similarity=0.445  Sum_probs=29.8

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCC
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNL   86 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp   86 (305)
                      ..|++|+.+++.+...+..        .-++.+|+..++++|+.
T Consensus         2 ~~C~~C~~~v~~i~~~l~~--------~~t~~~I~~~l~~~C~~   37 (39)
T PF05184_consen    2 DECDICKFVVKEIEKLLKN--------NKTEEEIKKALEKACNK   37 (39)
T ss_dssp             HHHHHHHHHHHHHHHHHHS--------TCHHHHHHHHHHHHHTT
T ss_pred             CcchHHHHHHHHHHHHHHc--------CccHHHHHHHHHHHHhh
Confidence            3699999999999877751        12689999999999985

Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....

>KOG3782 consensus Predicted membrane protein, contains type II SA sequence [General function prediction only]

Probab=92.87  E-value=0.45  Score=43.44  Aligned_cols=88  Identities=25%  Similarity=0.516  Sum_probs=58.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCC-------------------CC----chHHHHHHHHhhcCCcccccchheee--
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPK-------------------KI----SEFEIIGIAENVCNLKKEEADWILKI--   97 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pk-------------------Kv----~E~dVie~iE~vCnp~k~eG~WI~~~--   97 (305)
                      +.|.+|..++.++=-..+    +..||                   ||    ||.-.-|++|.+|+.-++=+.=+-+.  
T Consensus        25 ~~CgaC~alVtelE~~IA----~vDPkK~i~vgsFR~~p~G~q~~~kV~yarSE~hLTEl~E~iCd~mk~Y~~~~~~stg  100 (189)
T KOG3782|consen   25 VKCGACKALVTELEEAIA----KVDPKKMIDVGSFRLDPQGNQISKKVRYARSEMHLTELMEKICDKMKDYLKATYKSTG  100 (189)
T ss_pred             cccchHHHHHHHHHHHHH----hcCchheeeecceEECCCCCeeeeeeccchhHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            589999999988754433    22333                   33    89999999999999887655433221  


Q ss_pred             --eeee------cCCeeEEEeccccccccccchHHHHHHHHhhCCCCc
Q 035921           98 --DIVE------QGDKLVLVEQEAEGQCNSECKTIERACQEIMGYSDT  137 (305)
Q Consensus        98 --DIvE------kG~~L~lve~~~~gkC~~ECkTI~rACe~vmd~~dt  137 (305)
                        -+|.      +|+-+.|+.-..-|-||   +|+--+|++|+++-++
T Consensus       101 k~~yv~~~~~~~~~~es~l~~~~~d~d~n---~~l~~~c~evle~~~~  145 (189)
T KOG3782|consen  101 KFTYVKMIINGQMNPESSLVDFVQDGDLN---KSLGHFCNEVLEDNDE  145 (189)
T ss_pred             ceEEEEEeccCCCCCccccccccccchhh---HHHHHHHHHHHHHHHH
Confidence              1111      24555555544556665   7899999999985443

>KOG4260 consensus Uncharacterized conserved protein [Function unknown]

Probab=86.24  E-value=3.5  Score=40.58  Aligned_cols=94  Identities=27%  Similarity=0.556  Sum_probs=57.7

Q ss_pred             cccchhHHHHHHHHHHHH-HHHHhh------------hCCCCCchHHHHHHHHhhcCCcccccchheeeeeeecCCeeEE
Q 035921           42 YITCQVCEKLASQLYHQV-QKKQAQ------------ISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVL  108 (305)
Q Consensus        42 yIrC~VCe~iak~ly~~v-~~k~~~------------~~pkKv~E~dVie~iE~vCnp~k~eG~WI~~~DIvEkG~~L~l  108 (305)
                      .-.|-.|..++...-+-+ ...|..            ++.-|-||.-.+|+.|.+|--..     +...|.         
T Consensus        27 p~pCrtC~~LVssFn~GlerT~r~hfaGGdTAWEEknL~kYk~SE~RLvEilEglCsks~-----~~n~Df---------   92 (350)
T KOG4260|consen   27 PEPCRTCRGLVSSFNEGLERTARHHFAGGDTAWEEKNLSKYKTSETRLVEILEGLCSKSS-----LPNMDF---------   92 (350)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhhhccCCCchhhhhhhhhhccccchhHHHHHHHhhhccC-----CCCCCh---------
Confidence            346999999987654322 222222            11223489999999999997554     333343         


Q ss_pred             EeccccccccccchHHHHHHHHhhCCCCcchhhhhhccCCChHHHHHhhchhhhccccC
Q 035921          109 VEQEAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACST  167 (305)
Q Consensus       109 ve~~~~gkC~~ECkTI~rACe~vmd~~dtDvae~L~~~~~~~~al~~~lC~d~S~aC~~  167 (305)
                                 +|-|....=|+.+.       ++-|+..-..--|++|||-|--+-|--
T Consensus        93 -----------eCh~lle~hEellE-------~w~~hkq~e~Pdl~~WlCvdqLkvCCp  133 (350)
T KOG4260|consen   93 -----------ECHTLLEKHEELLE-------EWWYHKQHESPDLFNWLCVDQLKVCCP  133 (350)
T ss_pred             -----------HHHHHHHHHHHHHH-------HHHHHhhcCCchHHhHhhhhhheeccC
Confidence                       58888888776653       444432222224679999877666653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	305
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 42/267 (15%)

Query: 53  SQLYHQVQKKQAQISPKKISEFEIIGIAENVCN-LKKEEADWILKIDIVEQGDKLVLVEQ 111
            +  +Q +   +      +  F+   + +   + L KEE D I+       G   +    
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTL 71

Query: 112 EAEGQCNSECKTIERACQEIMGYSDTDVAEYLYTS---KPDIKSLVNYLCKDLSKACSTK 168
            ++          E   Q+ +        ++L +    +    S++  +  +        
Sbjct: 72  LSKQ---------EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 169 PPPVLKNRIPGEPFVPKPAKEAEMERIMRSM--------EGMPGAPG-----MQMYSKED 215
                K        V +     ++ + +  +        +G+ G+ G     + +     
Sbjct: 123 NQVFAKY------NVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-GKTWVALDVCLSYK 175

Query: 216 LMNMKNFGG---EDGDDNDDEDD-DDESDFPKNLGKVFREKESKSGDWKQRITDGILNTG 271
           +    +F        + N  E   +        +   +  +   S + K RI        
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 272 DVLKKQANKVS----NHVQRWWSGIKA 294
            +LK +  +       +VQ   +   A
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKA-WNA 261

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	305
1l9l_A	74	Granulysin; saposin fold, membrane-lytic, antimicr	92.13
3rfi_A	108	Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber	90.16
1nkl_A	78	NK-lysin; saposin fold, antibacterial peptide, tum	89.57
4ddj_A	83	Saposin-A, protein A; saposin fold, sphingolipid a	88.93
1n69_A	81	Saposin B; lipid binding protein, glycosphingolipi	88.26
2gtg_A	83	Proactivator polypeptide; saposin, sphingolipid ac	87.63
1of9_A	77	Pore-forming peptide ameobapore A; toxin, saplip,	87.33
2qyp_A	91	Proactivator polypeptide; saposin, activator prote	84.02
2js9_A	99	Saposin-like protein family protein 5; caenopore-5	81.13
3bqp_A	80	Proactivator polypeptide; saposin, sphingolipid ac	81.11

>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1

Probab=92.13  E-value=0.055  Score=40.96  Aligned_cols=37  Identities=19%  Similarity=0.400  Sum_probs=30.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      +.|.+|+++++++...+ .     .+   +|.+|+..++++|+...
T Consensus         2 ~~C~~C~~~v~~le~~l-~-----n~---Te~~I~~~L~~vC~~l~   38 (74)
T 1l9l_A            2 RDYRTCLTIVQKLKKMV-D-----KP---TQRSVSNAATRVCRTGR   38 (74)
T ss_dssp             HHHHHHHHHHHHHHHHC-S-----SC---CHHHHHHHHHHGGGSSC
T ss_pred             CCChHHHHHHHHHHHHh-c-----cc---CHHHHHHHHHHHHHhCC
Confidence            46999999999887655 1     12   79999999999999765

>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}

Probab=90.16  E-value=0.19  Score=40.02  Aligned_cols=37  Identities=14%  Similarity=0.385  Sum_probs=31.6

Q ss_pred             cccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCC
Q 035921           42 YITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNL   86 (305)
Q Consensus        42 yIrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp   86 (305)
                      -..|.+|++++..+..++...+        +|++|+..++++|+.
T Consensus        70 ~~~C~~Ce~~V~~ie~~L~~N~--------Te~eI~~~l~k~C~~  106 (108)
T 3rfi_A           70 APLCTACEMAVVWMQNQLKQEG--------TKEKVLEYVNQLCEK  106 (108)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSHH--------HHHHHHHHHHHHHTT
T ss_pred             CCcChhHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHhh
Confidence            4679999999999998876443        589999999999985

>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1

Probab=89.57  E-value=0.21  Score=37.40  Aligned_cols=38  Identities=26%  Similarity=0.435  Sum_probs=31.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      +.|++|+.+++.+...+.        +..+|.+|...++++|+-..
T Consensus         2 ~~C~~C~~iv~~ve~~l~--------~~~t~~~I~~~l~~~C~~lp   39 (78)
T 1nkl_A            2 YFCESCRKIIQKLEDMVG--------PQPNEDTVTQAASQVCDKLK   39 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHC--------SSCCHHHHHHHHHHHHHHSC
T ss_pred             CcchHHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHHhhCc
Confidence            469999999999887664        23479999999999999743

>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*

Probab=88.93  E-value=0.23  Score=36.94  Aligned_cols=40  Identities=18%  Similarity=0.421  Sum_probs=31.9

Q ss_pred             CcccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           41 PYITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        41 pyIrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      +-+.|++|+.++..+-..+..        ..+|++|+..++++|+...
T Consensus         2 ~~~~C~~C~~~v~~~~~~l~~--------n~t~~~I~~~l~~~C~~lp   41 (83)
T 4ddj_A            2 GSLPCDICKDVVTAAGDMLKD--------NATEEEILVYLEKTCDWLP   41 (83)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHS--------TTHHHHHHHHHHHHHTTSC
T ss_pred             CCCcchHHHHHHHHHHHHHHc--------CccHHHHHHHHHHHHHhCC
Confidence            457899999999888776652        1268999999999999875

>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3

Probab=88.26  E-value=0.33  Score=36.29  Aligned_cols=38  Identities=13%  Similarity=0.302  Sum_probs=31.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCch-HHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISE-FEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E-~dVie~iE~vCnp~k   88 (305)
                      ..|++|+++++.+...+...        -+| .+|++.++++|+...
T Consensus         4 ~~C~~C~~~V~~ve~~l~~n--------~t~~~~I~~~l~~~C~~lp   42 (81)
T 1n69_A            4 DVCQDCIQMVTDIQTAVRTN--------STFVQALVEHVKEECDRLG   42 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC--------TTHHHHHHHHHHHHGGGGC
T ss_pred             CcchHHHHHHHHHHHHHHhC--------CcHHHHHHHHHHHHHHHcC
Confidence            46999999999998777632        267 899999999999875

>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A

Probab=87.63  E-value=0.67  Score=34.29  Aligned_cols=77  Identities=23%  Similarity=0.521  Sum_probs=53.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcccccchheeeeeeecCCeeEEEeccccccccccch
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSECK  122 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k~eG~WI~~~DIvEkG~~L~lve~~~~gkC~~ECk  122 (305)
                      ..|++|+.+++.+-..+.        ...++.+|+..++++|+...                                 .
T Consensus         5 ~~C~~C~~~v~~i~~~l~--------~~~t~~~I~~~l~~~C~~lp---------------------------------~   43 (83)
T 2gtg_A            5 VYCEVCEFLVKEVTKLID--------NNKTEKEILDAFDKMCSKLP---------------------------------K   43 (83)
T ss_dssp             CHHHHHHHHHHHHHHHHH--------TTCCHHHHHHHHHHHTTSSC---------------------------------H
T ss_pred             CcChhHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHHHHCC---------------------------------C
Confidence            579999999999887765        12378999999999998765                                 1


Q ss_pred             HHHHHHHHhhCCCCcchhhhhhccCCChHHHHHhhchhhhcccc
Q 035921          123 TIERACQEIMGYSDTDVAEYLYTSKPDIKSLVNYLCKDLSKACS  166 (305)
Q Consensus       123 TI~rACe~vmd~~dtDvae~L~~~~~~~~al~~~lC~d~S~aC~  166 (305)
                      ....-|..+++..-..+.++|.+ ..+++    .+|..+ +.|.
T Consensus        44 ~~~~~C~~~V~~y~~~ii~~l~~-~~~P~----~iC~~l-~lC~   81 (83)
T 2gtg_A           44 SLSEECQEVVDTYGSSILSILLE-EVSPE----LVCSML-HLCS   81 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT-TCCHH----HHHHHT-TSCC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-CCCHH----HHHHhc-CCCC
Confidence            24556777776544556677664 34565    457543 6665

>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4

Probab=87.33  E-value=0.3  Score=36.53  Aligned_cols=36  Identities=22%  Similarity=0.459  Sum_probs=30.2

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLK   87 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~   87 (305)
                      ..|++|+.+++.+-+.+.        .. +|.+|+..++++|+..
T Consensus         3 ~~C~~C~~vv~~ve~~l~--------~n-t~~~I~~~l~~~C~~l   38 (77)
T 1of9_A            3 ILCNLCTGLINTLENLLT--------TK-GADKVKDYISSLCNKA   38 (77)
T ss_dssp             SSHHHHHHHHHHHHHHCS--------SS-CSHHHHHHHHHHHTTC
T ss_pred             CcchhHHHHHHHHHHHHH--------HC-cHHHHHHHHHHHHHcC
Confidence            469999999998876554        34 7899999999999976

>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A

Probab=84.02  E-value=0.59  Score=35.40  Aligned_cols=38  Identities=24%  Similarity=0.525  Sum_probs=31.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      ..|++|+.++..+-..+...        .++.+|+..++++|+...
T Consensus         6 ~~C~~C~~vv~~i~~~l~~n--------~t~~~I~~~l~~~C~~lp   43 (91)
T 2qyp_A            6 VYCEVCEFLVKEVTKLIDNN--------KTEKEILDAFDKMCSKLP   43 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHTSH--------HHHHHHHHHHHHHHHTSC
T ss_pred             CcchHHHHHHHHHHHHHhcC--------CcHHHHHHHHHHHHHHCC
Confidence            57999999999998777532        257999999999999765

>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A

Probab=81.13  E-value=0.48  Score=37.62  Aligned_cols=62  Identities=16%  Similarity=0.201  Sum_probs=45.9

Q ss_pred             cccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcccccchheeeeeeecCCeeEEEeccccccccccc
Q 035921           42 YITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKKEEADWILKIDIVEQGDKLVLVEQEAEGQCNSEC  121 (305)
Q Consensus        42 yIrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k~eG~WI~~~DIvEkG~~L~lve~~~~gkC~~EC  121 (305)
                      -..|++|+++++.+...+          .-+|.+|...++++|+..-                                 
T Consensus        21 ~~~C~~C~~vV~~ve~~l----------n~t~~~I~~~L~~~C~~lp---------------------------------   57 (99)
T 2js9_A           21 ALSCQMCELVVKKYEGSA----------DKDANVIKKDFDAECKKLF---------------------------------   57 (99)
T ss_dssp             SSTHHHHHHHHHHHTTTS----------SCCHHHHHHHHHHHHHTGG---------------------------------
T ss_pred             CCcchhHHHHHHHHHHHH----------HhhHHHHHHHHHHHHHcCC---------------------------------
Confidence            367999999999988666          1268999999999998654                                 


Q ss_pred             hH---HHHHHHHhhCCCCcchhhhhhcc
Q 035921          122 KT---IERACQEIMGYSDTDVAEYLYTS  146 (305)
Q Consensus       122 kT---I~rACe~vmd~~dtDvae~L~~~  146 (305)
                      ++   +..-|+.+++.--..+.++|.++
T Consensus        58 ~~ipf~~~~C~~~V~~y~~~II~~L~~~   85 (99)
T 2js9_A           58 HTIPFGTRECDHYVNSKVDPIIHELEGG   85 (99)
T ss_dssp             GGSTTHHHHHHTTTTTTHHHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            23   56778888874444455776654

>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A

Probab=81.11  E-value=1  Score=32.61  Aligned_cols=38  Identities=29%  Similarity=0.515  Sum_probs=30.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      ..|++|+.++..+-..+.        ..-++.+|+..++++|+...
T Consensus         3 ~~C~~C~~~v~~i~~~l~--------~~~t~~~I~~~l~~~C~~lp   40 (80)
T 3bqp_A            3 GFCEVCKKLVGYLDRNLE--------KNSTKQEILAALEKGCSFLP   40 (80)
T ss_dssp             TTHHHHHHHHHHHHHHSC--------TTCCHHHHHHHHHHHGGGSC
T ss_pred             CcchhHHHHHHHHHHHHH--------cccHHHHHHHHHHHHHHhCC
Confidence            469999999998876553        22368999999999999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	305
d1qdma1	104	(Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4	91.31
d1l9la_	74	Granulysin, NKG5 protein {Human (Homo sapiens) [Ta	88.93
d2gtga1	78	Saposin C {Human (Homo sapiens) [TaxId: 9606]}	87.9
d1of9a_	77	Ameobapore A {Entamoeba histolytica [TaxId: 5759]}	82.63
d1n69a_	78	Saposin B {Human (Homo sapiens) [TaxId: 9606]}	80.48

>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Swaposin
domain: (Pro)phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=91.31  E-value=0.11  Score=38.49  Aligned_cols=36  Identities=19%  Similarity=0.399  Sum_probs=30.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCC
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNL   86 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp   86 (305)
                      .-|.+|+++++.+...+..        .-+|.+|..+++++|+.
T Consensus        67 ~~C~~C~~~v~~v~~~l~~--------n~Te~eI~~~l~~vC~~  102 (104)
T d1qdma1          67 PMCSACEMAVVWMQNQLAQ--------NKTQDLILDYVNQLCNR  102 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--------TCCHHHHHHHHHHHTTC
T ss_pred             CchhhHHHHHHHHHHHHHc--------cccHHHHHHHHHHHHhh
Confidence            6799999999999987762        12699999999999985

>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Granulysin, NKG5 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.93  E-value=0.12  Score=36.57  Aligned_cols=36  Identities=17%  Similarity=0.354  Sum_probs=27.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           44 TCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        44 rC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      -|++|+++++.+.. +.       ..+ +|.+|.+.++++||...
T Consensus         3 ~c~tC~~vv~~ve~-l~-------~n~-t~~~I~~~l~~~C~~lp   38 (74)
T d1l9la_           3 DYRTCLTIVQKLKK-MV-------DKP-TQRSVSNAATRVCRTGR   38 (74)
T ss_dssp             HHHHHHHHHHHHHH-HC-------SSC-CHHHHHHHHHHGGGSSC
T ss_pred             ccHHHHHHHHHHHH-Hh-------CCC-CHHHHHHHHHhHHHHCC
Confidence            49999999998753 21       122 78999999999999764

>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: NKL-like
domain: Saposin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.90  E-value=0.3  Score=33.80  Aligned_cols=38  Identities=24%  Similarity=0.511  Sum_probs=30.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      |.|..|+.+++.+...+.      .+  -++.+|++.++++|+-..
T Consensus         2 i~C~~C~~~v~~~~~~l~------~~--~t~~~I~~~l~~~C~~lp   39 (78)
T d2gtga1           2 VYCEVCEFLVKEVTKLID------NN--KTEKEILDAFDKMCSKLP   39 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHH------TT--CCHHHHHHHHHHHTTSSC
T ss_pred             CccHHHHHHHHHHHHHHh------CC--chHHHHHHHHHHHHHhCC
Confidence            579999999999877664      22  258999999999998654

>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Ameobapore A
domain: Ameobapore A
species: Entamoeba histolytica [TaxId: 5759]

Probab=82.63  E-value=0.31  Score=34.24  Aligned_cols=37  Identities=22%  Similarity=0.457  Sum_probs=27.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           43 ITCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        43 IrC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      +.|.+|+.+++.+- ++.      .. + ++.+|.+.++++|+...
T Consensus         3 ~~C~~C~~~v~~~~-~l~------~~-~-t~~~I~~~l~~~C~~lp   39 (77)
T d1of9a_           3 ILCNLCTGLINTLE-NLL------TT-K-GADKVKDYISSLCNKAS   39 (77)
T ss_dssp             SSHHHHHHHHHHHH-HHC------SS-S-CSHHHHHHHHHHHTTCS
T ss_pred             cchHHHHHHHHHHH-HHH------cC-C-cHHHHHHHHHHHHHHCC
Confidence            67999999999764 221      11 2 56789999999999653

>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Saposin-like
superfamily: Saposin
family: Saposin B
domain: Saposin B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.48  E-value=0.5  Score=33.34  Aligned_cols=38  Identities=13%  Similarity=0.337  Sum_probs=29.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhhCCCCCchHHHHHHHHhhcCCcc
Q 035921           44 TCQVCEKLASQLYHQVQKKQAQISPKKISEFEIIGIAENVCNLKK   88 (305)
Q Consensus        44 rC~VCe~iak~ly~~v~~k~~~~~pkKv~E~dVie~iE~vCnp~k   88 (305)
                      -|++|+.+++.+...+..-..       .|+.|...++++|+...
T Consensus         3 ~C~~C~~~v~~v~~~l~~n~t-------~~~~I~~~l~~~C~~lp   40 (78)
T d1n69a_           3 VCQDCIQMVTDIQTAVRTNST-------FVQALVEHVKEECDRLG   40 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTT-------HHHHHHHHHHHHGGGGC
T ss_pred             chHHHHHHHHHHHHHHhcCcc-------HHHHHHHHHHHHHHhCC
Confidence            599999999999877763111       25678899999999754