Citrus Sinensis ID: 035960


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
MDGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGGVDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
ccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccEEEEEEEEEccccccccccccHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHccEEEEEEccccccccccccEEEEcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEcccccccccccccccccccc
cccccccEEEEcccccEEEEccccccHHHHHHccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHEEEccccEEEEEEccccccccccccHEEHHccHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEccHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHccccccccEEEcccccEEEEccccccccccc
mdgtkevlglrnvsshcsisemddydlsklldkprlnierqrsfdeRSLSELSIGltrggvdnyestyspggrsgfdtpvsstrnsfephpMVAEAWEALRRSLVYfrgqpvgtiaaydhaseevlnydqvfvRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRfklgegampassKFFTILFGKQILLLQILStgdlslaetpecQKGMRLILALCLsegfdtfptllcadgcsmiDRRMVILRDDLV
mdgtkevlglrnvsshcsisemddydlsklldkprlnierqrsfderslselsigltrggvdnYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
MDGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGGVDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
*******************************************************************************************MVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILR****
******************ISEMDDYDLSKLLDKPRLNIER******************************************************EAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
********GLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGGVDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
******VLG*RNVSSHCSISEMDDYDLSKLLDKPRLNI***************************************************HPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGGVDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFTILFGKQILLLQILSTGDLSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
74476783 557 neutral/alkaline invertase [Manihot escu 0.972 0.447 0.811 1e-119
449443830 554 PREDICTED: uncharacterized protein LOC10 0.960 0.444 0.800 1e-119
288901118 557 neutral/alkaline invertase 1 [Hevea bras 0.972 0.447 0.797 1e-117
384371338 557 neutral/alkaline invertase [Manihot escu 0.972 0.447 0.789 1e-117
385282636 557 cytosolic invertase 1 [Prunus persica] 0.972 0.447 0.797 1e-117
288901116 557 neutral/alkaline invertase 2 [Hevea bras 0.972 0.447 0.800 1e-116
224135579 557 predicted protein [Populus trichocarpa] 0.972 0.447 0.786 1e-116
225460726 556 PREDICTED: uncharacterized protein LOC10 0.968 0.446 0.771 1e-113
255571720 552 beta-fructofuranosidase, putative [Ricin 0.945 0.438 0.788 1e-113
224146371 557 predicted protein [Populus trichocarpa] 0.972 0.447 0.757 1e-110
>gi|74476783|gb|ABA08442.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/276 (81%), Positives = 236/276 (85%), Gaps = 27/276 (9%)

Query: 1   MDGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGG 60
           MDGTKE +GLRNVSS CSISEMDD+DLS+LLDKPRLNIERQRSFDERSLSELSIGLTRGG
Sbjct: 1   MDGTKE-MGLRNVSSTCSISEMDDFDLSRLLDKPRLNIERQRSFDERSLSELSIGLTRGG 59

Query: 61  VDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDH 120
           +D YESTYSPGGRSGFDTP SSTRNSFEPHPMVA+AWEALRRS+VYFRGQPVGTIAA DH
Sbjct: 60  LDIYESTYSPGGRSGFDTPASSTRNSFEPHPMVADAWEALRRSIVYFRGQPVGTIAAIDH 119

Query: 121 ASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMP 180
           ASEEVLNYDQVFVRDFVPSALAFLMNGEP+IVKNFLLKTL LQGWEKRIDRFKLGEGAMP
Sbjct: 120 ASEEVLNYDQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLHLQGWEKRIDRFKLGEGAMP 179

Query: 181 ASSKFF--------TIL--FGKQ--------------ILLLQIL--STGDLSLAETPECQ 214
           AS K          T++  FG+               I+LL+    STGDLSLAETPECQ
Sbjct: 180 ASFKVLHDPIRKTDTLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLSLAETPECQ 239

Query: 215 KGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVI 250
           KGMRLIL LCLSEGFDTFPTLLCADGCSMIDRRM I
Sbjct: 240 KGMRLILTLCLSEGFDTFPTLLCADGCSMIDRRMGI 275




Source: Manihot esculenta

Species: Manihot esculenta

Genus: Manihot

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443830|ref|XP_004139679.1| PREDICTED: uncharacterized protein LOC101214631 [Cucumis sativus] gi|449520833|ref|XP_004167437.1| PREDICTED: uncharacterized LOC101214631 [Cucumis sativus] Back     alignment and taxonomy information
>gi|288901118|gb|ADC68261.1| neutral/alkaline invertase 1 [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|384371338|gb|AFH77958.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
>gi|385282636|gb|AFI57905.1| cytosolic invertase 1 [Prunus persica] Back     alignment and taxonomy information
>gi|288901116|gb|ADC68260.1| neutral/alkaline invertase 2 [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|224135579|ref|XP_002327253.1| predicted protein [Populus trichocarpa] gi|222835623|gb|EEE74058.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225460726|ref|XP_002271919.1| PREDICTED: uncharacterized protein LOC100257298 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255571720|ref|XP_002526803.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223533807|gb|EEF35538.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224146371|ref|XP_002325983.1| predicted protein [Populus trichocarpa] gi|222862858|gb|EEF00365.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
TAIR|locus:2133737 558 CINV2 "cytosolic invertase 2" 0.707 0.324 0.782 7.8e-95
TAIR|locus:2014676 551 CINV1 "cytosolic invertase 1" 0.679 0.315 0.761 1.6e-92
TAIR|locus:2199690 534 A/N-InvD "alkaline/neutral inv 0.628 0.301 0.742 2.1e-86
TAIR|locus:2116870 571 A/N-InvB "alkaline/neutral inv 0.679 0.304 0.657 2.5e-77
TAIR|locus:2016064 499 A/N-InvF "alkaline/neutral inv 0.472 0.242 0.760 2.6e-69
TAIR|locus:2027600 616 A/N-InvA "alkaline/neutral inv 0.367 0.152 0.606 7e-39
TAIR|locus:2171112 617 INV-E "alkaline/neutral invert 0.503 0.209 0.477 1.3e-26
TAIR|locus:2084329 664 A/N-InvC "alkaline/neutral inv 0.621 0.239 0.406 3.9e-24
TAIR|locus:2074434 659 INVH "invertase H" [Arabidopsi 0.367 0.142 0.595 4.9e-24
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 718 (257.8 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
 Identities = 144/184 (78%), Positives = 157/184 (85%)

Query:     2 DGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKPR-LNIERQRSFDERSLSELSIGLTRGG 60
             +G KE L LR   SHCS+SEMDD+DL++ L+KPR L IER+RSFDERS+SELS G  R  
Sbjct:     3 EGHKEPLVLRVEGSHCSLSEMDDFDLTRALEKPRQLKIERKRSFDERSMSELSTGYVRQD 62

Query:    61 VDNYESTYSPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDH 120
                 E  +SPG RS  DTP+S  RNSFEPHPMVAEAWEALRRS+V+FRGQPVGTIAAYDH
Sbjct:    63 -SILEMAHSPGSRSMVDTPLS-VRNSFEPHPMVAEAWEALRRSMVFFRGQPVGTIAAYDH 120

Query:   121 ASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMP 180
             ASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKR+DRFKLGEG MP
Sbjct:   121 ASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRVDRFKLGEGVMP 180

Query:   181 ASSK 184
             AS K
Sbjct:   181 ASFK 184


GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=IGI;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005829 "cytosol" evidence=NAS
GO:0005987 "sucrose catabolic process" evidence=IGI
GO:0048364 "root development" evidence=IGI
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00410102
hypothetical protein (558 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.2046.1
hypothetical protein (187 aa)
       0.465
gw1.II.870.1
hypothetical protein (187 aa)
       0.456

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
PLN03005 550 PLN03005, PLN03005, beta-fructofuranosidase 1e-134
PLN02973 571 PLN02973, PLN02973, beta-fructofuranosidase 1e-103
pfam12899 437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 8e-84
PLN02703 618 PLN02703, PLN02703, beta-fructofuranosidase 2e-51
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
 Score =  389 bits (999), Expect = e-134
 Identities = 186/271 (68%), Positives = 214/271 (78%), Gaps = 32/271 (11%)

Query: 5   KEVLGLRNVSSHCSISEMDDYDLSKLLDKPRLNIERQRSFDERSLSELSIGLTRGGVDNY 64
            E LGLR V SHCS+SEMDD DL++ LDKPRL IER+RSFDERS+SELS G +R     +
Sbjct: 1   MEGLGLRAVGSHCSLSEMDDLDLTRALDKPRLKIERKRSFDERSMSELSTGYSR-----H 55

Query: 65  ESTY-SPGGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASE 123
           +  + SP GRS  DTP+SS RNSFEPHPM+AEAWEALRRS+V+FRGQPVGT+AA D+ ++
Sbjct: 56  DGIHDSPRGRSVLDTPLSSARNSFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTD 115

Query: 124 EVLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASS 183
           EVLNYDQVFVRDFVPSALAFLMNGEPDIVK+FLLKTLQLQGWEKR+DRFKLGEG MPAS 
Sbjct: 116 EVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQGWEKRVDRFKLGEGVMPASF 175

Query: 184 KFF--------TIL--FGKQ--------------ILLLQIL--STGDLSLAETPECQKGM 217
           K           I+  FG+               I+LL+    STGDL+L+ETPECQKGM
Sbjct: 176 KVLHDPIRETDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPECQKGM 235

Query: 218 RLILALCLSEGFDTFPTLLCADGCSMIDRRM 248
           +LIL+LCL+EGFDTFPTLLCADGCSMIDRRM
Sbjct: 236 KLILSLCLAEGFDTFPTLLCADGCSMIDRRM 266


Length = 550

>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 256
PLN02973 571 beta-fructofuranosidase 100.0
PLN03005 550 beta-fructofuranosidase 100.0
PF12899 436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PLN02703 618 beta-fructofuranosidase 100.0
TIGR01577 616 oligosac_amyl oligosaccharide amylase. The name of 93.65
PF06202 370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 82.92
>PLN02973 beta-fructofuranosidase Back     alignment and domain information
Probab=100.00  E-value=5.7e-98  Score=719.26  Aligned_cols=251  Identities=66%  Similarity=1.071  Sum_probs=238.9

Q ss_pred             CCCCcccccccccCCcccccccccchhhhhccCC-CCchhhhcccccchhhhhhcccc-------CCCccCcccccCC--
Q 035960            1 MDGTKEVLGLRNVSSHCSISEMDDYDLSKLLDKP-RLNIERQRSFDERSLSELSIGLT-------RGGVDNYESTYSP--   70 (256)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~p-~~~ier~rs~ders~~el~~~~~-------~~~~~~~~~~~sp--   70 (256)
                      +|+++|| ++|+++++++++|+|++|++||++|| ++||||||||||||++|++....       .+..+++|+++||  
T Consensus         8 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (571)
T PLN02973          8 VDVNQNG-NIKNVDSLSTLDDIDDIDFAKLLEKPRPLNIDRLRSLDERSLTELTGSPQLRNADNASRAPDHADYVISPSF   86 (571)
T ss_pred             ccccccc-ccccccccccccccchhhHHHHhcCCcccchhhccccchhhhhhcCcccccCCcccccccccchhhccCCCc
Confidence            4678999 99999999999999999999999999 59999999999999999974322       3568999999999  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChhHHHHHHHHhhcceeecCeeeEEEeecCCCCcccCCCCceeeecchHHHHHHHhcCChh
Q 035960           71 GGRSGFDTPVSSTRNSFEPHPMVAEAWEALRRSLVYFRGQPVGTIAAYDHASEEVLNYDQVFVRDFVPSALAFLMNGEPD  150 (256)
Q Consensus        71 ~~~s~~~tp~~~~~~~~~~~~~~~eAwe~L~~SlV~~~G~pVGTvAA~D~~~~~aLNYdqvFvRDFVPSalafLm~Ge~e  150 (256)
                      |+|||++||+  +..+|++||++++|||+|++|+|||+|||||||||+||+.+ ++||+|||+||||||||||||+|++|
T Consensus        87 ~~~~~~~~~~--~~~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~~~-~lNY~qVFiRDfVpsaLafLl~Ge~e  163 (571)
T PLN02973         87 GRRSGFNTPR--SQPGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNSEE-KLNYDQVFVRDFVPSALAFLMNGEPD  163 (571)
T ss_pred             CccccCCCCc--ccccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCccc-cccCcchhhhccHHHHHHHHHCCCHH
Confidence            9999999998  46789999999999999999999999999999999999876 89999999999999999999999999


Q ss_pred             HHHHHHHHhhhcccceeeecccccCCcccccceeeEE--------e--ecCCc--------------eEEEE--EeecCC
Q 035960          151 IVKNFLLKTLQLQGWEKRIDRFKLGEGAMPASSKFFT--------I--LFGKQ--------------ILLLQ--ILSTGD  204 (256)
Q Consensus       151 IVkNFL~~tL~LQs~ek~iD~f~~g~GvmPASFKV~~--------L--DFGe~--------------iILLr--~k~TgD  204 (256)
                      ||||||++||+||+|||++|+|++|+|+|||||||.+        +  |||++              |||||  +|+|||
T Consensus       164 IVrnFl~~TL~lq~~ektld~~q~g~G~mPaSfkv~~~p~~~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD  243 (571)
T PLN02973        164 IVKNFLLKTLRLQSWEKKIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGD  243 (571)
T ss_pred             HHHHHHHHHHhhhhhHHHHHhcccCCCCcCceeeecccccCccccccccccccccccccccchhhHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999876        3  99996              99999  999999


Q ss_pred             CccccChhhhhHHHHHHHHhhccCCCCCcceeecCccccccccccccCCCC
Q 035960          205 LSLAETPECQKGMRLILALCLSEGFDTFPTLLCADGCSMIDRRMVILRDDL  255 (256)
Q Consensus       205 ~sla~~pe~QrGirLIL~LCL~~~Fd~fPTLLvpDG~~MIDRRMGV~G~~~  255 (256)
                      .+|+++|||||||+|||+|||+++|||||||+|||||||||||||||||+|
T Consensus       244 ~s~~e~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pL  294 (571)
T PLN02973        244 SSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPI  294 (571)
T ss_pred             hhhhhcHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccH
Confidence            999999999999999999999999999999999999999999999999997



>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information
>PLN02703 beta-fructofuranosidase Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query256
d1lf6a1 397 Bacterial glucoamylase, C-terminal domain {Thermoa 88.29
d1ulva1 413 Glucodextranase, domain A {Arthrobacter globiformi 86.24
d1v7wa1 531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 80.24
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
Probab=88.29  E-value=0.051  Score=45.16  Aligned_cols=53  Identities=23%  Similarity=0.193  Sum_probs=43.1

Q ss_pred             EEEeecCCCCcc------cCCCCceeeecchHHHHHHHhcCChhHHHHHHHHhhhcccc
Q 035960          113 GTIAAYDHASEE------VLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLQLQGW  165 (256)
Q Consensus       113 GTvAA~D~~~~~------aLNYdqvFvRDFVPSalafLm~Ge~eIVkNFL~~tL~LQs~  165 (256)
                      +.|||...+-.+      .=+|.-||+||-+=++.+|+.-|.+|..+.||.-.++.|..
T Consensus        29 aiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~~~~~   87 (397)
T d1lf6a1          29 AYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAKVVKD   87 (397)
T ss_dssp             CBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence            467777655321      23589999999999999999999999999999998888764



>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure