Citrus Sinensis ID: 035961

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630
MPEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLTHLNQTSVASSISKNSSKVAQQNPLQQKPSGALPNRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
ccccccccccccccccccccHHHHHHHHHHHHHHEEEEEEEEEccccccHHHHHccccHHHHHHHccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHccccccccccccEEEEEEEEcccccEEEEEcccEEEEEEEEEEcccccEEEEccccccccccccEEEccccEEEEEEEEcccccccEEEEEEEEEcccccccccccccEEEcEEEEEEEEEEccccccccccccccccccccccccccEEccccccccccccccEEcccccccccccccccccccEEcccEEEEEccEEEEEccHHHHccccccEEEEEccccHHHHHHHHHHHHcccccccccccEEEEcccccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHccc
cccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHEEEEccccccccEEEcHHHHHHHHHEEEEcccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccEEEEEccccccccHHHHHHHHcccccccccccEEEEEEEccccccEEEEEcccEEEEEEEEcccccccEEEEcccccccccccccEEccccEEEEEEEEccccccccEEEEEEEEcccccccccccHcEEcHHEEEEEEEEccccccccccccccHccccccccccccccccccccccEcccccEEEcccccccccccccccHHHHHcccEEEEEccEEEEEcHHHHHHHccccEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEcccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccHHccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccEcHHHHHHHHHHHHHHHHHHccc
mpekvalssspkkwvlsgpmhqwrfGVLTALVFMGVVVVWSidgctidnFVQVWNLKQDRFVAVRANATVDAAQIQLNLtvntssvqdlptqrekpqlndvknftsndspslnlthlnqtsvassisknsskvaqqnplqqkpsgalpnrsespvleslkwvsvdlepnlstnLLARwlapggepcrdsrtveiaihgldggklmelsagdihefslssigcvggdyfetdlsgeswksrpvvkdfgngtySLSLQvhpdfvgdyNLTVILLFRHfeglkfspvrfvydrelrhipirffrskaqlpeikvcqksdfnrdiwsgrwtrhgknddcqinadgryrclawdfpcrnpwcygslgsiesngwvysshcsfrmfSADSAWNCLKNrwiffwgdsnhvDTIRNMLNFvldlpdikavprrfdlnfsnpkdpsqsvRITSIFNghwndtlnyqgldslkdEGFRNLVKKYfsedtvpdtvimnsglhdgvhfSNIRAFIKSANSAASFWKEVMESIRRRglvvpqifyrttvatggyarslafnpskmeAFNGVLLDKLRQAGvvsgvidnfdmtfpwhfdnrcndgvhygraplkmkwrdgqighQYFVDLMLVHVLLNALCAQS
mpekvalssspkkwvlsgPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNtssvqdlptqrekpqlndVKNFTSNDSPSLNLTHLNQTSVASSISKNSSKVAQQNPlqqkpsgalpnrseSPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIrffrskaqlpeikvcqksdfnrdiwsgrwtrhgknddcqINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLnfsnpkdpsqsvRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIrrrglvvpqIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
MPEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLTHLNQTsvassisknsskvaQQNPLQQKPSGALPNRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
*************WVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVN***************************************************************************SLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNF*********VRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALC***
*************WVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSV********************NDSPSLNL***********************************************V*VDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCA**
************KWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLTHLNQ*******************************SESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
*PEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNT***************NDVKNFTSNDSPSLNLT*****************************************ESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLTHLNQTSVASSISKNSSKVAQQNPLQQKPSGALPNRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALCAQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query630
255552217638 conserved hypothetical protein [Ricinus 0.982 0.970 0.651 0.0
356557883621 PREDICTED: uncharacterized protein LOC10 0.969 0.983 0.638 0.0
356546436621 PREDICTED: uncharacterized protein LOC10 0.969 0.983 0.640 0.0
225432528629 PREDICTED: uncharacterized protein LOC10 0.977 0.979 0.629 0.0
356520035569 PREDICTED: uncharacterized protein LOC10 0.893 0.989 0.642 0.0
356564534567 PREDICTED: uncharacterized protein LOC10 0.890 0.989 0.634 0.0
224100321662 predicted protein [Populus trichocarpa] 0.973 0.925 0.613 0.0
224100317662 predicted protein [Populus trichocarpa] 0.979 0.932 0.614 0.0
224107209626 predicted protein [Populus trichocarpa] 0.963 0.969 0.628 0.0
449433347589 PREDICTED: uncharacterized protein LOC10 0.912 0.976 0.616 0.0
>gi|255552217|ref|XP_002517153.1| conserved hypothetical protein [Ricinus communis] gi|223543788|gb|EEF45316.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/645 (65%), Positives = 503/645 (77%), Gaps = 26/645 (4%)

Query: 1   MPEKVALSSSP----KKWVL-SGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWN 55
           MPEK  LSSSP    + W+  S P+ QWRF +LTALVF+G+V VWSIDGCTI N ++ W 
Sbjct: 1   MPEK-GLSSSPSPNHQSWLFRSSPLLQWRFHILTALVFVGMVTVWSIDGCTIKNVIESWR 59

Query: 56  LKQDRFVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLT 115
            +Q+ ++    +   +A  +       T S     T+      N + N  S+  P+ N +
Sbjct: 60  FRQEEYLRKVTSQPSNATNL-------TQSNTTDTTETSSSSYNILNNDNSSYVPASNYS 112

Query: 116 H------LNQTSVASSISKNSSKVAQQNPLQQKPS-GALPNRSESPVLESLKWVSVDLEP 168
                  L + S  +     S+ V Q     Q  S G L    E+ +  ++KWVS  LEP
Sbjct: 113 DGFLEKPLEKESEEAHAKWVSADVQQNITSHQNLSAGFLEKPIENELEANVKWVSAILEP 172

Query: 169 NLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIG------C 222
           +L+ NLL+RWLAPGGEPC+DSRTV+I I GLDG  L+EL+AG+ HEF   ++       C
Sbjct: 173 DLTPNLLSRWLAPGGEPCKDSRTVDIVIPGLDGRNLIELTAGNSHEFIFQAVDEFKNPLC 232

Query: 223 VGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFS 282
           +GGDYFETDLSGE WKSRP+V+DFGNG+YS+SLQVHPDFVGDYNLTVILLFRHFEGLKFS
Sbjct: 233 LGGDYFETDLSGEEWKSRPLVRDFGNGSYSISLQVHPDFVGDYNLTVILLFRHFEGLKFS 292

Query: 283 PVRFVYDRELRHIPIRFFRSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGR 342
           P RFVYDRELR + IRF ++  +LPE+++CQKSDF +D+W GRWTRHGKND C+I+ DGR
Sbjct: 293 PSRFVYDRELRKVQIRFVKAHYKLPELQICQKSDFTKDLWLGRWTRHGKNDGCEISNDGR 352

Query: 343 YRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNH 402
           YRCL  DFPC++PWC GSLG +ESNGWVYSSHCSFR+FSADSAWNCLK RWIFFWGDSNH
Sbjct: 353 YRCLPSDFPCQSPWCNGSLGLLESNGWVYSSHCSFRLFSADSAWNCLKGRWIFFWGDSNH 412

Query: 403 VDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSL 462
           VDTIRNMLNF+LDLPDIK+VPRRFD NFSNPKD SQSVRITSIFNGHWN+T NY GLDSL
Sbjct: 413 VDTIRNMLNFLLDLPDIKSVPRRFDRNFSNPKDASQSVRITSIFNGHWNETQNYLGLDSL 472

Query: 463 KDEGFRNLVKKYFSEDTVPDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRR 522
           KDEGFRNL+KKYFSEDTVPDT+I+NSGLHDG+++ N+R F   A+ A SFWKEV++S+++
Sbjct: 473 KDEGFRNLLKKYFSEDTVPDTIILNSGLHDGIYWKNVRRFSAGADYAVSFWKEVVDSVKQ 532

Query: 523 RGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPW 582
           RGLV P+IFYRTT++TGGYAR+LAFNP KME FN V+LDK RQ+G++SGVIDNFDMTFPW
Sbjct: 533 RGLVAPKIFYRTTISTGGYARALAFNPYKMEVFNWVVLDKFRQSGLLSGVIDNFDMTFPW 592

Query: 583 HFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLVHVLLNALC 627
           H+DNRCNDGVHYGRAP KMKWRDG+IGHQYFVDLML HVLLN LC
Sbjct: 593 HYDNRCNDGVHYGRAPAKMKWRDGEIGHQYFVDLMLAHVLLNVLC 637

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356557883|ref|XP_003547239.1| PREDICTED: uncharacterized protein LOC100785350 [Glycine max] Back     alignment and taxonomy information
>gi|356546436|ref|XP_003541632.1| PREDICTED: uncharacterized protein LOC100811844 [Glycine max] Back     alignment and taxonomy information
>gi|225432528|ref|XP_002277614.1| PREDICTED: uncharacterized protein LOC100244329 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520035|ref|XP_003528671.1| PREDICTED: uncharacterized protein LOC100783018 [Glycine max] Back     alignment and taxonomy information
>gi|356564534|ref|XP_003550508.1| PREDICTED: uncharacterized protein LOC100777897 [Glycine max] Back     alignment and taxonomy information
>gi|224100321|ref|XP_002311830.1| predicted protein [Populus trichocarpa] gi|222851650|gb|EEE89197.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224100317|ref|XP_002311829.1| predicted protein [Populus trichocarpa] gi|222851649|gb|EEE89196.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224107209|ref|XP_002314409.1| predicted protein [Populus trichocarpa] gi|222863449|gb|EEF00580.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449433347|ref|XP_004134459.1| PREDICTED: uncharacterized protein LOC101204185 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query630
TAIR|locus:2082455594 AT3G06150 "AT3G06150" [Arabido 0.785 0.833 0.653 1.6e-208
TAIR|locus:2179644551 AT5G19060 "AT5G19060" [Arabido 0.761 0.871 0.655 2.4e-201
TAIR|locus:2082455 AT3G06150 "AT3G06150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1902 (674.6 bits), Expect = 1.6e-208, Sum P(2) = 1.6e-208
 Identities = 332/508 (65%), Positives = 417/508 (82%)

Query:   135 QQN-PLQQKPSGALP---NRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSR 190
             +QN  L   P   +P   N + +      +W++   + N + NL+  WLAPGG PCR+++
Sbjct:    87 RQNLTLMMAPRNLVPKKTNLTSNSTRVQFEWITAGSQKNFTANLMRGWLAPGGAPCREAK 146

Query:   191 TVEIAIHGLDGGKLMELSAGDIHEFSLSSIG------CVGGDYFETDLSGESWKSRPVVK 244
             TVEI++ G+DG   +EL+AG+IHEF   +I       C+GGDYFETD+SGE+WKSRP VK
Sbjct:   147 TVEISVPGVDGIDSVELTAGEIHEFKFQAIDESGKNVCIGGDYFETDISGENWKSRPPVK 206

Query:   245 DFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSK- 303
             DFGNGTYS SLQVHP+F GD+NLTVILLFRH++GLKFS  R  +DR+LR++ +RF ++  
Sbjct:   207 DFGNGTYSFSLQVHPEFAGDFNLTVILLFRHYQGLKFSTSRLGFDRKLRNVRLRFVKTPD 266

Query:   304 AQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGS 363
               LPE++ C+KSDFNRD WSGRWTR GKND+CQI+ DGRYRCLA DFPCR PWC G++G+
Sbjct:   267 VTLPELRSCKKSDFNRDAWSGRWTRLGKNDECQISNDGRYRCLAADFPCRKPWCDGAVGA 326

Query:   364 IESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVP 423
             IESNGWVYSSHCSF++FSA+ AW+CLK +WIFFWGDSNHVD+IRN+LNFVL  P+I AVP
Sbjct:   327 IESNGWVYSSHCSFKLFSAEKAWDCLKGKWIFFWGDSNHVDSIRNLLNFVLGHPEIPAVP 386

Query:   424 RRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDT--VP 481
             RRFD+ FSNPK+PS++VRITSIFNGHWN+T NYQGLDSLKD  FR L+KKYF+E+T  VP
Sbjct:   387 RRFDMKFSNPKNPSETVRITSIFNGHWNETKNYQGLDSLKDRDFRELLKKYFNEETNRVP 446

Query:   482 DTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGY 541
             D +I+NSGLHDG+H++++RAF K A +AA+FW+EV + ++ RGL  P++ +R T+ATGGY
Sbjct:   447 DVMIVNSGLHDGIHWTSLRAFAKGAETAAAFWREVFDGVKSRGLQPPEVIFRNTIATGGY 506

Query:   542 ARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKM 601
             AR LAFNPSKMEAFNGV L+K+R AG+V+ V+DNFDMT+PWH+DNRCNDGVHYGRAP KM
Sbjct:   507 ARMLAFNPSKMEAFNGVFLEKMRDAGLVTSVVDNFDMTYPWHYDNRCNDGVHYGRAPAKM 566

Query:   602 KWRDGQIGHQYFVDLMLVHVLLNALCAQ 629
             +WRDG+IGHQYFVDLMLVHVLLNALC +
Sbjct:   567 RWRDGEIGHQYFVDLMLVHVLLNALCVR 594
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2179644 AT5G19060 "AT5G19060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019900001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (629 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 630
PF06312219 Neurexophilin: Neurexophilin 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 99.69
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.19
PF00630101 Filamin: Filamin/ABP280 repeat; InterPro: IPR01786 97.84
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 97.83
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 97.77
smart0055793 IG_FLMN Filamin-type immunoglobulin domains. These 97.76
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 97.64
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 97.58
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 97.54
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.35
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 97.13
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 97.13
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 96.94
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 96.88
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 96.71
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 96.71
PLN02629387 powdery mildew resistance 5 96.52
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 96.5
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 96.24
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 95.96
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 95.91
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 95.86
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 95.75
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 95.42
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 95.34
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 94.39
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 94.17
COG2845354 Uncharacterized protein conserved in bacteria [Fun 93.39
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 92.32
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 91.65
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 87.86
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 87.3
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 85.92
PF0183599 A2M_N: MG2 domain; InterPro: IPR002890 The protein 84.75
>PF06312 Neurexophilin: Neurexophilin Back     alignment and domain information 
Probab=100.00  E-value=3.4e-33  Score=278.09  Aligned_cols=175  Identities=21%  Similarity=0.332  Sum_probs=139.3

Q ss_pred             CCCCCccccccccccCC-CCcchHHHHhhhcCCCCcCCCCcceEEEEeeecCCCceeeEecccEEEEEEEEe----eeec
Q 035961          150 RSESPVLESLKWVSVDL-EPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSI----GCVG  224 (630)
Q Consensus       150 ~~~~~~~~~~~w~~~~~-~~~~~~~~l~~~~~~~~~~c~~~~t~~i~~~gl~~~~~~~y~vGD~lev~I~Ar----K~yG  224 (630)
                      +.+..++..+.|+.++. ...+           .+.+++..++++|+...    ......+++.....|+.-    |+||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~t~p~~s~f~il~~~----~~~~~~~~~~~~~~~~~~~~~~K~yG   68 (219)
T PF06312_consen    4 REKESLLAALRWPKPPTPNVTL-----------LQSTDPAHSTFTILNSN----SAYRVHVQDTKRRPIVKTGRRRKTYG   68 (219)
T ss_pred             cccccchhhhcCCCCCCCCcch-----------hhccCCCcceEEEecCC----ccccccccceeeeeeeccCCcccccC
Confidence            34567888999999974 4445           78899999999998765    311224445555444422    9999


Q ss_pred             -ceEEEEEecCCCCCCCCc--eEecCCceEEEEEEcCCCceeeEEEEEEEE-----ee---ehhcC-cCCCcEEEEEEEe
Q 035961          225 -GDYFETDLSGESWKSRPV--VKDFGNGTYSLSLQVHPDFVGDYNLTVILL-----FR---HFEGL-KFSPVRFVYDREL  292 (630)
Q Consensus       225 -GDfFrArL~sp~lkAg~~--VtDhgNGTYtvsF~L~~~W~G~v~vsV~LV-----L~---~~r~~-~~~p~rv~f~~~F  292 (630)
                       ||| ||||++++++||++  |+||+||||+|+|+|  +|+|+++|+|+||     .+   ++++. +..++|+ |.|.|
T Consensus        69 ~GDf-rAri~s~~l~ag~~G~V~Dh~NGTYtv~F~L--~W~G~v~vsV~LVHPSEAV~v~~~l~~~r~~~~~r~-F~~~f  144 (219)
T PF06312_consen   69 WGDF-RARIFSPKLKAGAAGKVTDHGNGTYTVSFPL--LWPGQVSVSVSLVHPSEAVSVLLRLQRSRESKPDRV-FNCRF  144 (219)
T ss_pred             CCCc-EEEEecCCccccceEEEEECCCCeEEEEEEe--ecCceEEEEEEEEcchhheeeehhhhhhhccCCCeE-EEEEE
Confidence             999 99999999999999  999999999999999  9999999999999     22   23332 2235677 99999


Q ss_pred             eccceeEEee-ccCC-CCCCccccCCC-CCCceeeecccCCCCCCcc-cc-cCCCceec
Q 035961          293 RHIPIRFFRS-KAQL-PEIKVCQKSDF-NRDIWSGRWTRHGKNDDCQ-IN-ADGRYRCL  346 (630)
Q Consensus       293 ~~g~~~e~t~-nv~l-~~~~~CdySD~-~~e~W~C~w~~kP~~l~C~-i~-~~g~y~~~  346 (630)
                      ..+...+.++ ++++ .+.++|+|+|+ ++++|||   +||++++|+ |. ..+.|+.+
T Consensus       145 ~~~~~~~~~~c~~~~~~~~~~C~ysd~~~~~~W~C---~KP~~l~C~~I~~~~~~Y~lv  200 (219)
T PF06312_consen  145 EYEKTEENTECNLCLNDPSEVCDYSDPRSGEPWFC---EKPKKLPCSAITHYSGDYKLV  200 (219)
T ss_pred             ecCCEEEEEeccccCCCCcceecCcCCCCCCEEEE---CCCCCCCCCeeEEEeccCcce
Confidence            9888877777 8887 56899999999 9999999   999999999 65 56777443

>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>smart00557 IG_FLMN Filamin-type immunoglobulin domains Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query630
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2ds4_A113 Tripartite motif protein 45; beta-sandwich, immuno 7e-06
2k7q_A191 Filamin-A; IG-like, ABP-280, actin binding protein 6e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.6 bits (138), Expect = 1e-08
 Identities = 71/509 (13%), Positives = 132/509 (25%), Gaps = 155/509 (30%)

Query: 2   PEKV-----ALSS-SPKKWV-LSGPMHQWRFG----VLTALV--------FMGVVVVW-S 41
            +       AL    P K V + G +     G     +   V         M   + W +
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDG-V----LGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 42  IDGCTIDNFV--QVWNLKQDRFVAVRANATVDAAQIQLNLTVNTSSVQD----LPTQREK 95
           +  C     V   +  L       +  N T  +     N+ +   S+Q     L   +  
Sbjct: 189 LKNCNSPETVLEMLQKL----LYQIDPNWTSRSDHSS-NIKLRIHSIQAELRRLLKSKPY 243

Query: 96  PQ----LNDVKN------F--------TSNDSPSLNLTHLNQTSVASSISKNSSKVAQQN 137
                 L +V+N      F        T+               V   +S  ++      
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK-----------QVTDFLSAATTTH---- 288

Query: 138 PLQQKPSGALPNRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIH 197
                             L+        L P+   +LL ++L                  
Sbjct: 289 ----------------ISLDHHSMT---LTPDEVKSLLLKYL------------------ 311

Query: 198 GLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQV 257
                 L        +   LS I     D   T    ++WK   V  D        SL  
Sbjct: 312 DCRPQDLPR-EVLTTNPRRLSIIAESIRDGLAT---WDNWKH--VNCDKLTTIIESSLN- 364

Query: 258 HPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIP-----IRFFRSKAQLPEI--- 309
                    L      + F+ L      F       HIP     + +F        +   
Sbjct: 365 --------VLEPAEYRKMFDRL----SVFPPS---AHIPTILLSLIWFDVIKSDVMVVVN 409

Query: 310 KVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRY----RCL-AWDFPCRNPWCYGSLGSI 364
           K+ + S   +       +      + ++  +  Y      +  ++ P    +    L   
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT--FDSDDLIPP 467

Query: 365 ESNGWVYSSHCSFRMFSADSAWNCLKNRWIFF---WGDS--NHVDTIRNMLNFVLD-LPD 418
             + + Y SH    + + +        R +F    + +    H  T  N    +L+ L  
Sbjct: 468 YLDQYFY-SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526

Query: 419 IKAVPRRFDLNFSNPKDPSQSVRITSIFN 447
           +     +F   +    DP     + +I +
Sbjct: 527 L-----KFYKPYICDNDPKYERLVNAILD 550
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 113 Back     alignment and structure
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Length = 191 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query630
2ds4_A113 Tripartite motif protein 45; beta-sandwich, immuno 99.01
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 98.46
1qfh_A212 Protein (gelation factor); actin binding protein, 98.23
1qfh_A212 Protein (gelation factor); actin binding protein, 98.15
2dib_A128 Filamin-B; beta-sandwich, immunoglobulin-like fold 98.14
1wlh_A311 Gelation factor; ABP-120, filamin, immunoglobulin 97.97
2d7m_A115 Filamin-C; beta-sandwich, immunoglobulin-like fold 97.82
1v05_A96 Filamin C; actin-binding protein, immunoglobulin; 97.8
2dia_A113 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.8
2dj4_A108 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.78
3rgh_A100 Filamin-A; cell adhesion, cytoskeleton-complex, di 97.78
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 97.77
1wlh_A311 Gelation factor; ABP-120, filamin, immunoglobulin 97.74
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 97.72
3cnk_A89 Filamin-A; FLNA24, X-RAY crystalography, homodimer 97.72
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 97.71
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 97.6
2e9j_A119 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.53
2hsj_A214 Putative platelet activating factor; structr genom 97.53
2dmb_A124 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.53
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 97.49
2bp3_A97 Filamin A; structural protein, cytoskeleton/comple 97.48
2k9u_A119 Gamma filamin; cytoskeletal complex, alternative s 97.43
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 97.4
2w0p_A94 Filamin-A; alternative splicing, cytoskeleton/comp 97.38
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 97.33
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 97.31
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 97.21
2ee6_A105 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.17
2d7o_A111 Filamin-C; beta-sandwich, immunoglobulin-like fold 97.08
2eea_A115 Filamin-B; beta-sandwich, immunoglobulin-like fold 97.0
2di8_A111 Filamin-B; beta-sandwich, immunoglobulin-like fold 96.94
2di9_A131 Filamin-B; beta-sandwich, immunoglobulin-like fold 96.93
2dic_A105 Filamin-B; beta-sandwich, immunoglobulin-like fold 96.88
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 96.87
2k7p_A188 Filamin-A; IG-like, ABP-280, actin binding protein 96.85
2d7p_A112 Filamin-C; beta-sandwich, immunoglobulin-like fold 96.75
2k7q_A191 Filamin-A; IG-like, ABP-280, actin binding protein 96.59
2eec_A125 Filamin-B; beta-sandwich, immunoglobulin-like fold 96.54
1vjg_A218 Putative lipase from the G-D-S-L family; structura 96.52
3bzw_A274 Putative lipase; protein structure initiative II, 96.41
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 96.38
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 96.35
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 96.32
2d7n_A93 Filamin-C; beta-sandwich, immunoglobulin-like fold 96.27
2dlg_A102 Filamin-B; beta-sandwich, immunoglobulin-like fold 96.22
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 95.89
2j3s_A288 Filamin-A; cytoskeleton, phosphorylation, structur 95.8
2nqc_A138 Filamin-C; immunoglobulin, metal binding, immune s 95.66
2j3s_A288 Filamin-A; cytoskeleton, phosphorylation, structur 95.49
2di7_A124 BK158_1; beta-sandwich, immunoglobulin-like fold, 95.25
2dmc_A116 Filamin-B; beta-sandwich, immunoglobulin-like fold 95.22
2ee9_A95 Filamin-B; beta-sandwich, immunoglobulin-like fold 94.73
4b7l_A347 Filamin-B; structural protein, FR 1 filamin hinge 94.17
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 93.47
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 92.38
2k7q_A191 Filamin-A; IG-like, ABP-280, actin binding protein 91.29
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 91.07
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 90.6
2k7p_A188 Filamin-A; IG-like, ABP-280, actin binding protein 90.22
2p9r_A102 Alpha-2-M, alpha-2-macroglobulin; human alpha2-mac 88.51
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 87.95
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
Probab=99.01  E-value=9.2e-10  Score=96.44  Aligned_cols=86  Identities=23%  Similarity=0.242  Sum_probs=70.6

Q ss_pred             CCcceEEEEeeecCCCceeeEecccEEEEEEEEe------eeecceEEEEEecCCCCC-CCCc--eEecCCceEEEEEEc
Q 035961          187 RDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSI------GCVGGDYFETDLSGESWK-SRPV--VKDFGNGTYSLSLQV  257 (630)
Q Consensus       187 ~~~~t~~i~~~gl~~~~~~~y~vGD~lev~I~Ar------K~yGGDfFrArL~sp~lk-Ag~~--VtDhgNGTYtvsF~L  257 (630)
                      .+.+...+.-|||+     ...+|+..+|.|+|+      +++|||.|+++|.+|.-+ +.+.  |+|++||||+|+|++
T Consensus         9 ~dp~~~~~~G~Gl~-----~~~~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p   83 (113)
T 2ds4_A            9 VDPAKCVLQGEDLH-----RAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTP   83 (113)
T ss_dssp             BCTTTCEEECTTTT-----EEETTCCEEEEEECBBTTSSBCCCCCCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEEC
T ss_pred             CcCCEeEEECCCcC-----ceecCCcEEEEEEEECCCCCCcccCCceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEe
Confidence            34455566678874     579999999999999      689999999999998753 3444  999999999999999


Q ss_pred             CCCceeeEEEEEEEEeeehhcC
Q 035961          258 HPDFVGDYNLTVILLFRHFEGL  279 (630)
Q Consensus       258 ~~~W~G~v~vsV~LVL~~~r~~  279 (630)
                        .|+|.+.|+|.+-=+++.+.
T Consensus        84 --~~~G~y~i~V~~~g~~i~gS  103 (113)
T 2ds4_A           84 --KEPGVYTVWVCIKEQHVQGS  103 (113)
T ss_dssp             --SSSEEEEEEEEESSCBCTTC
T ss_pred             --CCCeEEEEEEEECCEECCCC
Confidence              99999999998875555543
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 Back     alignment and structure
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 Back     alignment and structure
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A Back     alignment and structure
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A Back     alignment and structure
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens} Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A Back     alignment and structure
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A Back     alignment and structure
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A Back     alignment and structure
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A Back     alignment and structure
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A Back     alignment and structure
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens} Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 630
d1qfha2108 b.1.18.10 (A:750-857) F-actin cross-linking gelati 2e-04
>d1qfha2 b.1.18.10 (A:750-857) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]} Length = 108 Back     information, alignment and structure

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 222 CVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKF 281
             GGD FE  ++G + +      D  +GTY  +        G ++  V L  +H EG   
Sbjct: 27  TYGGDKFEVSITGPAEEITLDAIDNQDGTY--TAAYSLVGNGRFSTGVKLNGKHIEG--- 81

Query: 282 SPVRFVYDRELRHIP 296
           SP + V     +  P
Sbjct: 82  SPFKQVLGNPGKKNP 96

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query630
d1qfha1104 F-actin cross-linking gelation factor (ABP-120) re 98.44
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.36
d1qfha2108 F-actin cross-linking gelation factor (ABP-120) re 97.99
d1wlha1101 F-actin cross-linking gelation factor (ABP-120) re 97.69
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 97.68
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 97.63
d2d7ma1102 Filamin C {Human (Homo sapiens) [TaxId: 9606]} 97.39
d2dj4a1101 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 97.39
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 97.32
d1v05a_96 Filamin C {Human (Homo sapiens) [TaxId: 9606]} 97.11
d2diaa1100 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 97.08
d2dica198 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 97.04
d2bp3a192 Filamin a {Human (Homo sapiens) [TaxId: 9606]} 97.02
d2di8a198 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 97.01
d2diba1115 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 97.0
d2w0pa192 Filamin a {Human (Homo sapiens) [TaxId: 9606]} 97.0
d2di9a1118 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 96.82
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 96.8
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 96.73
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 96.65
d2dmba1111 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 96.52
d2d7pa199 Filamin C {Human (Homo sapiens) [TaxId: 9606]} 96.11
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 95.89
d2dmca1103 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 95.54
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 95.46
d2nqca197 Filamin C {Human (Homo sapiens) [TaxId: 9606]} 93.68
d2j3sa288 Filamin b {Human (Homo sapiens) [TaxId: 9606]} 93.46
d2d7na180 Filamin C {Human (Homo sapiens) [TaxId: 9606]} 93.26
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 89.55
>d1qfha1 b.1.18.10 (A:646-749) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=98.44  E-value=1.8e-07  Score=79.37  Aligned_cols=87  Identities=24%  Similarity=0.348  Sum_probs=68.6

Q ss_pred             CCCCcceEEEEeeecCCCceeeEecccEEEEEEEEe------eeecceEEEEEecCCCCCCCCc-eEecCCceEEEEEEc
Q 035961          185 PCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSI------GCVGGDYFETDLSGESWKSRPV-VKDFGNGTYSLSLQV  257 (630)
Q Consensus       185 ~c~~~~t~~i~~~gl~~~~~~~y~vGD~lev~I~Ar------K~yGGDfFrArL~sp~lkAg~~-VtDhgNGTYtvsF~L  257 (630)
                      |+++.+...+.=+||.     .-.+|...+|.|+++      ++.|||-|++.|.+|.-..-.. |+|++||||+|+|+.
T Consensus         2 p~~~a~~~~a~G~Gl~-----~~~~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~v~~p~g~~~~~~v~d~~dGtY~v~y~p   76 (104)
T d1qfha1           2 PAPSAEHSYAEGEGLV-----KVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDA   76 (104)
T ss_dssp             CCBCTTTCEEESGGGT-----EEETTSCEEEEEECBBSSSCBCSSCCCCEEEEEECGGGCEECCEEEECSSSEEEEEECC
T ss_pred             CCCCcCccEEECCCcC-----cEeCCCcEEEEEEEecCCCCEeccCCceeEEEEECCCCCEEeeEEEECCCCEEEEEEEe
Confidence            4555666666666763     558999999999999      6789999999999885443333 999999999999998


Q ss_pred             CCCceeeEEEEEEEEeeehhc
Q 035961          258 HPDFVGDYNLTVILLFRHFEG  278 (630)
Q Consensus       258 ~~~W~G~v~vsV~LVL~~~r~  278 (630)
                        .-+|.+.|.|.+-=+.+.+
T Consensus        77 --~~~G~~~i~V~~~g~~i~g   95 (104)
T d1qfha1          77 --PVEGNYNVNVTLRGNPIKN   95 (104)
T ss_dssp             --CSSEEEEEEEEETTEECBT
T ss_pred             --CCCEeEEEEEEECCEECCC
Confidence              9999999999765444433
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qfha2 b.1.18.10 (A:750-857) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1wlha1 b.1.18.10 (A:547-647) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1v05a_ b.1.18.10 (A:) Filamin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bp3a1 b.1.18.10 (A:1863-1954) Filamin a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2w0pa1 b.1.18.10 (A:2237-2328) Filamin a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2di9a1 b.1.18.10 (A:8-125) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2dmba1 b.1.18.10 (A:8-118) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d7pa1 b.1.18.10 (A:8-106) Filamin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2dmca1 b.1.18.10 (A:8-110) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2nqca1 b.1.18.10 (A:2482-2578) Filamin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j3sa2 b.1.18.10 (A:2149-2236) Filamin b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure