Citrus Sinensis ID: 035983

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKSAQGGKD
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEEEEcccccEEEEccccccccccccccHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHEHccccccEEEEccccccccEEEcccHHHHHcccccccc
Coil and Loop (DISEMBL)
MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEesrhvtsptEIQRLLDEAREASRFISTMIVQAKLnerggyevkptqehagatldipsEEILRKSAQGGKD
Flexible Loop (DISEMBL)
MAGEAMIAYRSLIratrksfagdtvMLKESAKEIRkrfeesrhvtspteiQRLLDEAREASRFISTMIVqaklnerggyevkptqehagatldipseeilrksaqggkd
Low Complexity Region (SEG)
MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKSAQGGKD
Disordered region (IsUnstruct)
******IAYRSLIRAT*********************************************RFISTMIVQAKL************************************
Disordered Region (DISOPRED)
**GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIR******************LDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGAT******************
Disordered Region (DISEMBL)
MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEI**************EIQRLLDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEIL*********
Disordered Region (DISPRO)
*AGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRK*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKSAQGGKD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
Q0UIG9	115	Mitochondrial zinc mainte	N/A	no	0.816	0.773	0.329	8e-07
C4Y4R9	115	Mitochondrial zinc mainte	N/A	no	0.642	0.608	0.342	8e-06
C5FGP0	123	Mitochondrial zinc mainte	N/A	no	0.669	0.593	0.390	1e-05
A5DY61	117	Mitochondrial zinc mainte	N/A	no	0.688	0.641	0.333	2e-05
C9SBR9	109	Mitochondrial zinc mainte	N/A	no	0.614	0.614	0.342	5e-05
A5DH70	111	Mitochondrial zinc mainte	N/A	no	0.715	0.702	0.373	7e-05
C0S8M6	124	Mitochondrial zinc mainte	N/A	no	0.587	0.516	0.385	0.0002
C1G016	124	Mitochondrial zinc mainte	N/A	no	0.587	0.516	0.385	0.0002
A3LNG8	121	Mitochondrial zinc mainte	yes	no	0.660	0.595	0.333	0.0002
C1GSS8	124	Mitochondrial zinc mainte	N/A	no	0.587	0.516	0.385	0.0002

>sp|Q0UIG9|MZM1_PHANO Mitochondrial zinc maintenance protein 1, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=MZM1 PE=3 SV=2

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 5/94 (5%)

Query: 5  AMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPT-EIQRLLDEAREASRF 63
          A++AYR+L+R+ R +F GD   L  +  E+R+ FE +R +T+ + E+ + L  A E ++F
Sbjct: 6  ALVAYRNLLRSARVAFQGDMNTLFAARAEVRRNFESNRSLTAGSDELSKQLTHAEEVAKF 65

Query: 64 ISTMIVQAK-LNERGGYEVKPTQEHA--GATLDI 94
          +   +VQ +  ++ G Y+++   EH   G   DI
Sbjct: 66 LRENVVQGQAADDEGSYKLR-IHEHTERGNNEDI 98

Modulates the mitochondrial matrix zinc pool.
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (taxid: 321614)

>sp|C4Y4R9|MZM1_CLAL4 Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) GN=MZM1 PE=3 SV=1

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 42/70 (60%)

Query: 1  MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
          M+  A+ AYR+ +RATR +F GD  +LK +  +IR+    +R +    E+++ + E  E 
Sbjct: 1  MSNPALQAYRTALRATRVAFNGDNFVLKSARAKIREGLLSNRDLADKMEVEKKVAELNEV 60

Query: 61 SRFISTMIVQ 70
          ++F+   IVQ
Sbjct: 61 AQFLVKNIVQ 70

Modulates the mitochondrial matrix zinc pool.

Clavispora lusitaniae (strain ATCC 42720) (taxid: 306902)

>sp|C5FGP0|MZM1_ARTOC Mitochondrial zinc maintenance protein 1, mitochondrial OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=MZM1 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)

Query: 5  AMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRH--VTSPTEIQRLLDEAREASR 62
          A+ AYR L+RATR +F GD  +L  +  E RK+F++SR   V +P +IQ  L    E + 
Sbjct: 10 AISAYRQLLRATRIAFNGDFPVLHAARAEARKQFDQSRQPGVDTPMKIQHAL----ETAH 65

Query: 63 FISTMIVQA---KLNERGGYEV 81
           + + IVQ    +  E GG +V
Sbjct: 66 ILRSNIVQGTKIETKEEGGEQV 87

Modulates the mitochondrial matrix zinc pool.

Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) (taxid: 554155)

>sp|A5DY61|MZM1_LODEL Mitochondrial zinc maintenance protein 1, mitochondrial OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=MZM1 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 5  AMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFI 64
          A +AYR+ ++A   +F  D  ML  + ++IR     +  +T P E+   + +  E S+FI
Sbjct: 3  AKLAYRNALKAINIAFKNDQPMLGAAKQQIRSGIMSNAQLTKPEEVAEAVKKLDEVSKFI 62

Query: 65 STMIVQAKLNERGGY 79
             +VQ KL E G Y
Sbjct: 63 RHNLVQGKLQEDGRY 77

Modulates the mitochondrial matrix zinc pool.

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (taxid: 379508)

>sp|C9SBR9|MZM1_VERA1 Mitochondrial zinc maintenance protein 1, mitochondrial OS=Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=MZM1 PE=3 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)

Query: 5  AMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHV--TSPTEIQRLLDEAREASR 62
          A++AYR+L RA   +F GD  +L  + ++IR  F E   +    PT IQ ++++A E ++
Sbjct: 3  ALVAYRNLWRAANIAFQGDAPVLAAARQQIRDNFREKSTLPANDPT-IQPMIEKAEEVAK 61

Query: 63 FISTMIVQAK 72
          F+   +VQ +
Sbjct: 62 FLRHNLVQGQ 71

Modulates the mitochondrial matrix zinc pool.

Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (taxid: 526221)

>sp|A5DH70|MZM1_PICGU Mitochondrial zinc maintenance protein 1, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=MZM1 PE=3 SV=2

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 1  MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHV-TSPTEIQRLLDEARE 59
          M+  A+ AYR+ +RATR SF  D  +L  + K+IR  FE SR+   +  EI ++     E
Sbjct: 1  MSSRALSAYRAALRATRISFQQDNDVLLAARKQIRDGFEASRNSDNAEEEIVKM----NE 56

Query: 60 ASRFISTMIVQAKLNERGGYEVK 82
           S+F+ + IVQ +    G Y +K
Sbjct: 57 ISKFLVSNIVQGEKQGDGKYFLK 79

Modulates the mitochondrial matrix zinc pool.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

>sp|C0S8M6|MZM1_PARBP Mitochondrial zinc maintenance protein 1, mitochondrial OS=Paracoccidioides brasiliensis (strain Pb03) GN=MZM1 PE=3 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 4  EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRH--VTSPTEIQRLLDEAREAS 61
           A+ AYR L+RATR +F GD   L  +  E RK F+++R   V +P  IQ     A E +
Sbjct: 8  NALSAYRLLLRATRIAFQGDFTTLHAARAEARKHFDQNRRLGVDTPKHIQ----HAVETA 63

Query: 62 RFISTMIVQA 71
            + T +VQ 
Sbjct: 64 EILRTNVVQG 73

Modulates the mitochondrial matrix zinc pool.

Paracoccidioides brasiliensis (strain Pb03) (taxid: 482561)

>sp|C1G016|MZM1_PARBD Mitochondrial zinc maintenance protein 1, mitochondrial OS=Paracoccidioides brasiliensis (strain Pb18) GN=MZM1 PE=3 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 4  EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRH--VTSPTEIQRLLDEAREAS 61
           A+ AYR L+RATR +F GD   L  +  E RK F+++R   V +P  IQ     A E +
Sbjct: 8  NALSAYRLLLRATRIAFQGDFTTLHAARAEARKHFDQNRRLGVDTPKHIQ----HAVETA 63

Query: 62 RFISTMIVQA 71
            + T +VQ 
Sbjct: 64 EILRTNVVQG 73

Modulates the mitochondrial matrix zinc pool.

Paracoccidioides brasiliensis (strain Pb18) (taxid: 502780)

>sp|A3LNG8|MZM1_PICST Mitochondrial zinc maintenance protein 1, mitochondrial OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=MZM1 PE=3 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%)

Query: 8  AYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTM 67
          AYR+ +RATR +F  D  +L  +  +I+  F ++R +    EI   + +  E S+F+   
Sbjct: 12 AYRNALRATRIAFRQDVPVLSSARLQIKDGFTKNRELKDEAEISEAISKLNEVSKFLVQN 71

Query: 68 IVQAKLNERGGY 79
          IVQ +  E G Y
Sbjct: 72 IVQGEKQEDGKY 83

Modulates the mitochondrial matrix zinc pool.

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (taxid: 322104)

>sp|C1GSS8|MZM1_PARBA Mitochondrial zinc maintenance protein 1, mitochondrial OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=MZM1 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 4  EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRH--VTSPTEIQRLLDEAREAS 61
           A+ AYR L+RATR +F GD   L  +  E RK F+++R   V +P  IQ     A E +
Sbjct: 8  NALSAYRLLLRATRIAFQGDFTTLHAARAEARKHFDQNRRLGVDTPKHIQ----HAVETA 63

Query: 62 RFISTMIVQA 71
            + T +VQ 
Sbjct: 64 EILRTNVVQG 73

Modulates the mitochondrial matrix zinc pool.

Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) (taxid: 502779)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
255564172	105	catalytic, putative [Ricinus communis] g	0.926	0.961	0.782	8e-40
224131130	106	predicted protein [Populus trichocarpa]	0.926	0.952	0.762	2e-38
297817614	106	complex 1 family protein [Arabidopsis ly	0.935	0.962	0.764	4e-38
225437368	105	PREDICTED: mitochondrial zinc maintenanc	0.963	1.0	0.723	1e-37
18412508	106	complex 1-LYR domain-containing protein	0.935	0.962	0.745	1e-37
449469082	104	PREDICTED: mitochondrial zinc maintenanc	0.944	0.990	0.708	7e-37
351723297	106	uncharacterized protein LOC100305793 [Gl	0.935	0.962	0.640	1e-31
351727505	106	uncharacterized protein LOC100305547 [Gl	0.926	0.952	0.647	2e-30
388511375	108	unknown [Lotus japonicus]	0.935	0.944	0.631	3e-30
357442499	106	hypothetical protein MTR_1g088550 [Medic	0.926	0.952	0.647	6e-30

>gi|255564172|ref|XP_002523083.1| catalytic, putative [Ricinus communis] gi|223537645|gb|EEF39268.1| catalytic, putative [Ricinus communis]

 Score =  167 bits (423), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 93/101 (92%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           GEA+ AYRSL+RATRKSFAGDT+ML  SA E+RK+FEE+RHVTS T+IQ+LL+EAREAS 
Sbjct: 4   GEALTAYRSLLRATRKSFAGDTMMLNASASEVRKKFEENRHVTSDTQIQKLLEEAREASE 63

Query: 63  FISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKS 103
           FISTMIVQAKLN+RGGYEVK  +EHAGATL++PSEEIL+KS
Sbjct: 64  FISTMIVQAKLNDRGGYEVKLDKEHAGATLEVPSEEILKKS 104

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131130|ref|XP_002321008.1| predicted protein [Populus trichocarpa] gi|222861781|gb|EEE99323.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 93/101 (92%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           GEA+ AYR+L+RATRKSF GD++MLK SA E+RK+FEE+R V+S TEIQ+LL+EAREAS 
Sbjct: 5   GEALSAYRALLRATRKSFTGDSLMLKASASEVRKKFEENRDVSSETEIQKLLEEAREASH 64

Query: 63  FISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKS 103
           FI+TMIVQAKLN+RGGYEVKP ++HAGATL+IPSEEILRKS
Sbjct: 65  FIATMIVQAKLNDRGGYEVKPDKDHAGATLEIPSEEILRKS 105

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817614|ref|XP_002876690.1| complex 1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297322528|gb|EFH52949.1| complex 1 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/102 (76%), Positives = 92/102 (90%)

Query: 1   MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
           + GEA+IAYR+L+RATRKSFAGDT MLK SA EIRK+FEE+R V S  +I RLL+EAREA
Sbjct: 2   VTGEALIAYRALLRATRKSFAGDTEMLKASASEIRKKFEENRLVASNADITRLLEEAREA 61

Query: 61  SRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRK 102
           ++FISTMIVQAKLNERGGYEVK +QEHAGATL++PSEE+LRK
Sbjct: 62  TQFISTMIVQAKLNERGGYEVKASQEHAGATLELPSEEMLRK 103

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437368|ref|XP_002268744.1| PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Vitis vinifera] gi|297743889|emb|CBI36859.3| unnamed protein product [Vitis vinifera]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 91/105 (86%)

Query: 1   MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
           M GEA+ AYR+L+RATRKSFAGDTVMLK SA EIRK FE++R+VTS +EIQ LL+ AREA
Sbjct: 1   MGGEALSAYRTLLRATRKSFAGDTVMLKASAVEIRKHFEDNRNVTSQSEIQGLLESAREA 60

Query: 61  SRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKSAQ 105
           S FIS MIVQAKLN RGGYEVKP+++HAG TL+IPSE+IL+ S +
Sbjct: 61  SHFISNMIVQAKLNSRGGYEVKPSKDHAGGTLEIPSEDILKSSGK 105

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412508|ref|NP_567133.1| complex 1-LYR domain-containing protein [Arabidopsis thaliana] gi|7362761|emb|CAB83131.1| hypothetical protein [Arabidopsis thaliana] gi|21554092|gb|AAM63173.1| unknown [Arabidopsis thaliana] gi|28466831|gb|AAO44024.1| At3g62810 [Arabidopsis thaliana] gi|110743822|dbj|BAE99746.1| hypothetical protein [Arabidopsis thaliana] gi|332646875|gb|AEE80396.1| complex 1-LYR domain-containing protein [Arabidopsis thaliana]

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/102 (74%), Positives = 93/102 (91%)

Query: 1   MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
           + GEA+IAYR+L+RAT+KSFAGDT MLK SA EIRK+FEE+R V S ++I RLL+EAREA
Sbjct: 2   VTGEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREA 61

Query: 61  SRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRK 102
           ++FISTMIVQAKLNERGGYE+K +QEHAGATL++PSEE+LRK
Sbjct: 62  TQFISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRK 103

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469082|ref|XP_004152250.1| PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial-like [Cucumis sativus] gi|449531029|ref|XP_004172490.1| PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial-like [Cucumis sativus]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 92/103 (89%)

Query: 1   MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
           M GE + AYRSL+RAT++SFAGDT+ML ESA EIR++F+ESRHVTS  EI++LL+EAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKS 103
           S FIS MIVQAKL  RGGYE+KP+++HAGATL++P+EE+LRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 103

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723297|ref|NP_001236762.1| uncharacterized protein LOC100305793 [Glycine max] gi|255626615|gb|ACU13652.1| unknown [Glycine max]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/103 (64%), Positives = 89/103 (86%), Gaps = 1/103 (0%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           G+ + AYR+L++ATRK+F+GDT+MLKESA E+RK+FEE+++V+S  EIQ+LL EA EAS 
Sbjct: 4   GQVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEEASH 63

Query: 63  FISTMIVQAKLN-ERGGYEVKPTQEHAGATLDIPSEEILRKSA 104
           FI+ M+VQA+LN + G Y VKP +EHAGATL++PSEEI+RKSA
Sbjct: 64  FITNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKSA 106

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727505|ref|NP_001236907.1| uncharacterized protein LOC100305547 [Glycine max] gi|255625873|gb|ACU13281.1| unknown [Glycine max]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 86/102 (84%), Gaps = 1/102 (0%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           G+ + AYR+L++ATRKSF+GDT+MLKESA E+R +FEE++ V+S  EIQ+LL EA EAS 
Sbjct: 4   GQVLSAYRALLKATRKSFSGDTMMLKESALEVRNKFEENKSVSSQAEIQKLLLEAEEASH 63

Query: 63  FISTMIVQAKLN-ERGGYEVKPTQEHAGATLDIPSEEILRKS 103
           FI+ MIVQA+LN + G Y VKP +EHAGATL++PSEEI+RKS
Sbjct: 64  FITAMIVQAQLNPDSGTYLVKPGKEHAGATLELPSEEIIRKS 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511375|gb|AFK43749.1| unknown [Lotus japonicus]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 87/103 (84%), Gaps = 1/103 (0%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           GE + AYR++++ATRK+FAGD VMLK SA E+RK+FEE+R+V+S  EIQ+LL EA EAS 
Sbjct: 6   GEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASEASH 65

Query: 63  FISTMIVQAKLN-ERGGYEVKPTQEHAGATLDIPSEEILRKSA 104
           FI+ M+VQA+LN + G Y +KP +EHAGATL+IP+EEI+RKS+
Sbjct: 66  FITNMLVQAQLNSDAGSYVMKPGKEHAGATLEIPTEEIIRKSS 108

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357442499|ref|XP_003591527.1| hypothetical protein MTR_1g088550 [Medicago truncatula] gi|355480575|gb|AES61778.1| hypothetical protein MTR_1g088550 [Medicago truncatula]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 84/102 (82%), Gaps = 1/102 (0%)

Query: 3   GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR 62
           G+ + AYR++++ATRKSF GD  MLK SA E+RK+FEESR+VTS  EIQ+LL +A EA+ 
Sbjct: 4   GQVLSAYRAVLKATRKSFVGDHHMLKGSAAEVRKQFEESRNVTSEAEIQKLLAQANEAAE 63

Query: 63  FISTMIVQAKL-NERGGYEVKPTQEHAGATLDIPSEEILRKS 103
           F+STM+VQA L N+ G Y VKP +EHAGATL+IPSEEI+RKS
Sbjct: 64  FVSTMLVQAPLNNDAGSYVVKPEKEHAGATLEIPSEEIIRKS 105

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
TAIR|locus:2081640	106	AT3G62810 "AT3G62810" [Arabido	0.954	0.981	0.730	9.2e-36
ASPGD|ASPL0000067684	115	AN7144 [Emericella nidulans (t	0.614	0.582	0.362	5e-05
CGD|CAL0005231	117	orf19.5433 [Candida albicans (	0.660	0.615	0.25	8.1e-05
UNIPROTKB|Q5A7N3	117	MZM1 "Mitochondrial zinc maint	0.660	0.615	0.25	8.1e-05

TAIR|locus:2081640 AT3G62810 "AT3G62810" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 76/104 (73%), Positives = 94/104 (90%)

Query:     1 MAGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
             + GEA+IAYR+L+RAT+KSFAGDT MLK SA EIRK+FEE+R V S ++I RLL+EAREA
Sbjct:     2 VTGEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREA 61

Query:    61 SRFISTMIVQAKLNERGGYEVKPTQEHAGATLDIPSEEILRKSA 104
             ++FISTMIVQAKLNERGGYE+K +QEHAGATL++PSEE+LRK +
Sbjct:    62 TQFISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRKKS 105

GO:0003824 "catalytic activity" evidence=ISS

ASPGD|ASPL0000067684 AN7144 [Emericella nidulans (taxid:162425)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query:     2 AGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREAS 61
             A  A+ AYR ++RATR +F  DT +L  + +E R+ FE+ R     T +Q  ++ A E +
Sbjct:     6 AVSALSAYRQVLRATRIAFQNDTRVLLAARQEARQNFEKHRRYGVDTPMQ--INHALEVA 63

Query:    62 RFISTMIVQ 70
               +   IVQ
Sbjct:    64 SILRHNIVQ 72

GO:0003674 "molecular_function" evidence=ND

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0034551 "mitochondrial respiratory chain complex III assembly" evidence=IEA

CGD|CAL0005231 orf19.5433 [Candida albicans (taxid:5476)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 18/72 (25%), Positives = 42/72 (58%)

Query:     8 AYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTM 67
             AYR+ +RAT+ +F  D  +L+ +  ++++   ++ ++ +  EI+  + +  E ++F+   
Sbjct:     7 AYRNALRATKVAFRQDLPILQAARVQLKQGIRDNSNLQAQPEIEEAVQKLNEVAKFLIQN 66

Query:    68 IVQAKLNERGGY 79
             IVQ +  + G Y
Sbjct:    67 IVQGEKQQDGKY 78

GO:0003674 "molecular_function" evidence=ND

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0034551 "mitochondrial respiratory chain complex III assembly" evidence=IEA

UNIPROTKB|Q5A7N3 MZM1 "Mitochondrial zinc maintenance protein 1, mitochondrial" [Candida albicans SC5314 (taxid:237561)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 18/72 (25%), Positives = 42/72 (58%)

Query:     8 AYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTM 67
             AYR+ +RAT+ +F  D  +L+ +  ++++   ++ ++ +  EI+  + +  E ++F+   
Sbjct:     7 AYRNALRATKVAFRQDLPILQAARVQLKQGIRDNSNLQAQPEIEEAVQKLNEVAKFLIQN 66

Query:    68 IVQAKLNERGGY 79
             IVQ +  + G Y
Sbjct:    67 IVQGEKQQDGKY 78


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.128   0.335    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      109       109   0.00091  102 3  10 23  0.47    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  525 (56 KB)
  Total size of DFA:  121 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.41u 0.09s 18.50t   Elapsed:  00:00:01
  Total cpu time:  18.41u 0.09s 18.50t   Elapsed:  00:00:01
  Start:  Fri May 10 17:36:10 2013   End:  Fri May 10 17:36:11 2013

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_XIV0326 hypothetical protein (107 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	109
pfam05347	59	pfam05347, Complex1_LYR, Complex 1 protein (LYR fa	6e-07
pfam13232	61	pfam13232, Complex1_LYR_1, Complex1_LYR-like	8e-07

>gnl|CDD|203236 pfam05347, Complex1_LYR, Complex 1 protein (LYR family)

 Score = 42.6 bits (101), Expect = 6e-07
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 9  YRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
          YR L+R  RK    D    +   + IR  F +++++T P +I+ LL E ++ 
Sbjct: 7  YRQLLREARK--FPDYNAREYFRRRIRDEFRKNKNLTDPEKIEALLKEGKKQ 56

Proteins in this family have been identified as a component of the higher eukaryotic NADH complex. In Saccharomyces cerevisiae, the Isd11 protein has been shown to play a role in Fe/S cluster biogenesis in mitochondria. We have named this family LYR after a highly conserved tripeptide motif close to the N-terminus of these proteins. Length = 59

>gnl|CDD|221996 pfam13232, Complex1_LYR_1, Complex1_LYR-like

 Score = 42.6 bits (101), Expect = 8e-07
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 9  YRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREA 60
          YR L+RA RK    D    +   + IR  F +++ +T P +I++LL E ++ 
Sbjct: 7  YRQLLRAARKFP--DYNFREYIRRRIRDEFRKNKDLTDPEKIEKLLKEGKKQ 56

This is a family of proteins carrying the LYR motif of family Complex1_LYR, pfam05347, likely to be involved in Fe-S cluster biogenesis in mitochondria. Length = 61

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	109
KOG3801	94	consensus Uncharacterized conserved protein BCN92	99.67
PF13232	61	Complex1_LYR_1: Complex1_LYR-like	99.6
PF05347	59	Complex1_LYR: Complex 1 protein (LYR family); Inte	99.47
KOG3426	124	consensus NADH:ubiquinone oxidoreductase, NDUFA6/B	97.68
KOG4620	80	consensus Uncharacterized conserved protein [Funct	97.65
PF13233	104	Complex1_LYR_2: Complex1_LYR-like	97.62
KOG4100	125	consensus Uncharacterized conserved protein [Funct	96.0
KOG3466	157	consensus NADH:ubiquinone oxidoreductase, NDUFB9/B	95.69

>KOG3801 consensus Uncharacterized conserved protein BCN92 [RNA processing and modification]

Probab=99.67  E-value=4.8e-16  Score=104.68  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=69.4

Q ss_pred             hhHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcceeeecCCCceEE
Q 035983            2 AGEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEV   81 (109)
Q Consensus         2 ra~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~~~Lr~nVVQg~~~~~~~y~l   81 (109)
                      |.+++++||.+||++++.++.+++  +|+.++||+.|++|++++||.+|+++++.|+..+++|++++|.|++++.++--+
T Consensus         6 r~qvlsLyr~~lr~s~qfp~YNyR--eY~~RrtRD~Fr~Nkn~~Dp~e~~~l~~eakk~LevikRQ~ii~~lY~~~klIv   83 (94)
T KOG3801|consen    6 RRQVLSLYRNLLRESKQFPQYNYR--EYFQRRTRDTFRANKNVCDPAEIKKLYKEAKKQLEVIKRQSIIGQLYPKDKLIV   83 (94)
T ss_pred             HHHHHHHHHHHHHHHhhCCcccHH--HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcceee
Confidence            469999999999999994445665  799999999999999999999999999999999999999999999997554433

>PF13232 Complex1_LYR_1: Complex1_LYR-like

Probab=99.60  E-value=6.2e-15  Score=91.56  Aligned_cols=60  Identities=28%  Similarity=0.463  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 035983            4 EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFIS   65 (109)
Q Consensus         4 ~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~~~Lr   65 (109)
                      ++|++||+|||+++.+|.++.+  .+++.+||++|+.|++++||++|+++++.|.+.+.+|+
T Consensus         2 ~vL~LYR~lLR~~~~~~~~~~r--~~~~~~ir~~Fr~~~~~td~~~i~~~l~~~~~~L~~l~   61 (61)
T PF13232_consen    2 QVLSLYRQLLREASKFPDYNFR--SYFRRRIRDRFRRNKNVTDPEKIAKLLKEGRKELELLR   61 (61)
T ss_pred             hHHHHHHHHHHHhhhcCCcchH--HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            6899999999999998877877  79999999999999999999999999999999999874

>PF05347 Complex1_LYR: Complex 1 protein (LYR family); InterPro: IPR008011 This family of short proteins includes proteins from the NADH-ubiquinone oxidoreductase complex I

Probab=99.47  E-value=2.8e-13  Score=82.92  Aligned_cols=57  Identities=33%  Similarity=0.559  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q 035983            4 EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASR   62 (109)
Q Consensus         4 ~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~~   62 (109)
                      +||++||++||+++. |+++. ...+++..||++|++|++++||..|+.+++.|.+-++
T Consensus         2 ~vl~LYR~lLR~~~~-~~~~~-~r~~~~~~iR~~Fr~n~~~~d~~~I~~~l~~g~~~l~   58 (59)
T PF05347_consen    2 RVLSLYRQLLRAARS-FPDDS-EREYIRAEIRQEFRKNRNETDPEKIEELLKKGEEELE   58 (59)
T ss_pred             hHHHHHHHHHHHHHH-cCCcc-hHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhc
Confidence            689999999999976 66644 5689999999999999999999999999999988764

The family includes the B14 subunit from bovine NADH-ubiquinone oxidoreductase B14 subunit Q02366 from SWISSPROT, and the B22 subunit from the human enzyme Q9Y6M9 from SWISSPROT. The family has been named LYR after a highly conserved tripeptide motif close to the N terminus of these proteins. Members of this family also found in yeast which do contain this complex. In these organisms they are believed to be be required for iron-sulphur custer biogenesis.

>KOG3426 consensus NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit [Energy production and conversion]

Probab=97.68  E-value=0.00011  Score=51.85  Aligned_cols=68  Identities=24%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             hhHHHHHHHHHHHHHhhcCCCCHH----HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcce
Q 035983            2 AGEAMIAYRSLIRATRKSFAGDTV----MLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQ   70 (109)
Q Consensus         2 ra~aL~lYR~LlRa~r~~F~gD~~----~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~~~Lr~nVVQ   70 (109)
                      |.+||.+||..-|..=. |-.|+.    ++...|..||++|.+|.++|||..|+-||-++.+-++-+...--|
T Consensus        23 Rrrvl~~yra~~R~iP~-~~~dy~L~dm~~~~~R~~ir~qf~kn~hvTD~rViDlLV~kg~~elkeiv~~~kq   94 (124)
T KOG3426|consen   23 RRRVLDLYRAWYRSIPT-IVDDYNLQDMTVSQLRDKIREQFRKNAHVTDPRVIDLLVIKGMEELKEIVDHWKQ   94 (124)
T ss_pred             HHHHHHHHHHHHHhcCh-HHHhcCCcccCHHHHHHHHHHHHHhcCCcCCchhhhHHHHhhHHHHHHHHHHHhC
Confidence            45899999999998855 223333    478999999999999999999999999998888877776654433

>KOG4620 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.65  E-value=0.00031  Score=46.01  Aligned_cols=61  Identities=21%  Similarity=0.340  Sum_probs=47.1

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHH
Q 035983            3 GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVT--SPTEIQRLLDEAREASRFIST   66 (109)
Q Consensus         3 a~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~--d~~~I~e~i~~a~ev~~~Lr~   66 (109)
                      .+||.+||.+|||++--+ +.+.  ...-.-|+++|++|++++  |--.|+.++.-++.-.+.+.+
T Consensus         9 rqVlhlYR~~lraa~~Kp-~~~~--~~~m~fvh~EFrk~~~lpr~Df~~IEhLlRvG~rq~~~~s~   71 (80)
T KOG4620|consen    9 RQVLHLYRDLLRAARGKP-GAEA--RRWMAFVHAEFRKHAGLPRSDFLRIEHLLRVGRRQLQLLSS   71 (80)
T ss_pred             HHHHHHHHHHHHHhcCCC-chHH--HHHHHHHHHHHHHhcCCcHhHHHHHHHHHHHhHHHHHHhcC
Confidence            389999999999999744 3222  234566999999999986  556899999998887776653

>PF13233 Complex1_LYR_2: Complex1_LYR-like

Probab=97.62  E-value=0.00036  Score=46.85  Aligned_cols=64  Identities=20%  Similarity=0.314  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHhhcCCCCHHH------HHHHHHHH----HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 035983            5 AMIAYRSLIRATRKSFAGDTVM------LKESAKEI----RKRFEESRHVTSPTEIQRLLDEAREASRFISTMIV   69 (109)
Q Consensus         5 aL~lYR~LlRa~r~~F~gD~~~------l~aar~~i----R~~F~~n~~~~d~~~I~e~i~~a~ev~~~Lr~nVV   69 (109)
                      |+++||+|||+-+... ....+      .......|    +++|+.+.+.+++......+.++.+.+.||..+-.
T Consensus         1 V~~lYR~lLRel~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ef~~~~~~~~~~~~~~~~~~~~~y~~~L~~qr~   74 (104)
T PF13233_consen    1 VLSLYRSLLRELRRYP-RRSKIHQLKAPRSPGDQYVLEQARAEFRRHKSANDEEEAQEFLQEWENYATFLKNQRE   74 (104)
T ss_pred             ChHHHHHHHHHHHhhc-chhhhhhhhchhHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999732 11110      13456667    99999999998888999999999999999997764

>KOG4100 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.00  E-value=0.054  Score=38.34  Aligned_cols=74  Identities=18%  Similarity=0.298  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcceeeecCCCceEEee
Q 035983            4 EAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREASRFISTMIVQAKLNERGGYEVKP   83 (109)
Q Consensus         4 ~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~~~Lr~nVVQg~~~~~~~y~l~i   83 (109)
                      .+..+||.+||.-+-.+ ++.++|  --+-+|++|+-++++ .|..++--+..+..-+..|..++-|     .|+|+=.+
T Consensus        11 rvrlLYkriLrlHr~lp-~~~R~l--GD~YVkdEFrrHk~v-np~~~~~FlteW~~Ya~~l~qql~~-----~g~~K~~~   81 (125)
T KOG4100|consen   11 RVRLLYKRILRLHRGLP-AELRAL--GDQYVKDEFRRHKTV-NPLEAQGFLTEWERYAVALSQQLSS-----AGKWKGEI   81 (125)
T ss_pred             hHHHHHHHHHHHHccCC-hHHHHH--HHHHHHHHHHHhccC-ChHHHHHHHHHHHHHHHHHHHHhhh-----cCcccccc
Confidence            35569999999999855 566655  456689999999999 8899999999999999999987764     34554444


Q ss_pred             ccC
Q 035983           84 TQE   86 (109)
Q Consensus        84 ~~~   86 (109)
                      -++
T Consensus        82 g~~   84 (125)
T KOG4100|consen   82 GSD   84 (125)
T ss_pred             ccc
Confidence            443

>KOG3466 consensus NADH:ubiquinone oxidoreductase, NDUFB9/B22 subunit [Energy production and conversion]

Probab=95.69  E-value=0.044  Score=40.04  Aligned_cols=57  Identities=21%  Similarity=0.277  Sum_probs=46.6

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 035983            3 GEAMIAYRSLIRATRKSFAGDTVMLKESAKEIRKRFEESRHVTSPTEIQRLLDEAREAS   61 (109)
Q Consensus         3 a~aL~lYR~LlRa~r~~F~gD~~~l~aar~~iR~~F~~n~~~~d~~~I~e~i~~a~ev~   61 (109)
                      .+|+.||+..||...... +-..+..+..-.||..|.+|++ .|-.++..||++|.+-.
T Consensus        14 qkV~rLYKRaLR~lenWy-~~rn~yRy~ac~~RARFden~~-kD~~k~~~LLa~ge~E~   70 (157)
T KOG3466|consen   14 QKVRRLYKRALRDLENWY-VHRNIYRYQACIIRARFDENDE-KDVDKAIRLLAEGEREL   70 (157)
T ss_pred             HHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHH
Confidence            478999999999998855 4344467888889999999999 78888899999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00