Citrus Sinensis ID: 036039

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MASHRIGAAGGLSHDSAGPSNLHHHHVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPLFTAAAGGRPAATLEMFPSWPMRFQQTPRGSSKSGGESISTDSGSALNTISSGKAEASQSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPSSSQQNQNHQSAAALTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccccHcccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHEHHHHcccccHHHHHHHHHccccHHHHHHHHHHHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccccccccccccccccc
mashrigaagglshdsagpsnlhhhhvpyatslhqgfinqegpafdfgeLQEAIVLQGVkfrndeatkaplftaaaggrpaatlemfpswpmrfqqtprgssksggesistdsgsalntissgkaeasqsqleqpespisninhikpsasnqqQSVEMAndasrtgpsssqqnqnhqsaaaltdakpsqekrkgpgstsdrqlDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARsqvnfdpqlnlmnlsvpraaiFDMEYARWLEDDQRHISELRSGlnqhysdgdLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFlwmggfrpsELIKMLISQldplteqqVMGIYSLQQSTQQAEEALSQGLEQLQQSLIEtiaggpvvdGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLwasrpretmisednscqtttDLQMVQHSQNHFSNF
mashrigaAGGLSHDSAGPSNLHHHHVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPlftaaaggrpaATLEMFPSWPMRFQQTPRGSSKSGGESISTDSGSALNTISSGKAEASQSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPSSSQQNQNHQSaaaltdakpsqekrkgpgstsdrqldaktLRRLAQNReaarksrlrkkayVQQLETSRIKLNQLEQELQRARsqvnfdpqlnlMNLSVPRAAIFDMEYARWLEDDQRHISELRSglnqhysdgDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF
MASHRIGAAGGLSHDSAGPSNLHHHHVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPLFTAAAGGRPAATLEMFPSWPMRFQQTPRGSSKSGGESISTDSGSALNTISSGKAEASQSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPsssqqnqnhqsaaaLTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTqqaeealsqgleqlqqslieTIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF
**********************************QGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPLFTAAAGG****TL*************************************************************************************************************************************************************************NFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSL*******************QSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWA*********************************
***********************************************GELQEAIVLQ**************************LEMFP*******************************************************************************************************************************************YVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHI****************RIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQL****************************************************VVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWA*********************************
**********GLSHDSAGPSNLHHHHVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPLFTAAAGGRPAATLEMFPSWPMRF********************SALNTI****************SPISNINHIKPS******************************************************LDAKTLRRLAQN***********KAYVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSL************QGLEQLQQSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQH********
*************************HVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPL***AAGGRPAATLEMFPSWPM**************************************************************************************************************LDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLM*LSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPR*****************************
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MASHRIGAAGGLSHDSAGPSNLHHHHVPYATSLHQGFINQEGPAFDFGELQEAIVLQGVKFRNDEATKAPLFTAAAGGRPAATLEMFPSWPMRFQQTPRGSSKSGGESISTDSGSALNTISSGKAEASQSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPSSSQQNQNHQSAAALTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREAARKSRLRxxxxxxxxxxxxxxxxxxxxxxxxxxxxVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSLIETIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query508 2.2.26 [Sep-21-2011]
O24160456 TGACG-sequence-specific D N/A no 0.620 0.690 0.581 1e-105
Q41558476 Transcription factor HBP- N/A no 0.549 0.586 0.634 1e-100
P23923332 Transcription factor HBP- N/A no 0.624 0.954 0.568 1e-97
Q39140330 Transcription factor TGA6 no no 0.614 0.945 0.557 2e-95
P43273330 Transcription factor TGA2 no no 0.572 0.881 0.590 1e-94
Q39163330 Transcription factor TGA5 no no 0.547 0.842 0.611 2e-91
Q9SX27452 Transcription factor PERI no no 0.545 0.612 0.615 4e-90
Q93ZE2368 Transcription factor TGA7 no no 0.635 0.877 0.469 6e-84
Q39234384 Transcription factor TGA3 no no 0.555 0.734 0.544 8e-83
Q39162364 Transcription factor TGA4 no no 0.541 0.755 0.561 4e-82
>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1 Back     alignment and function desciption
 Score =  383 bits (983), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/339 (58%), Positives = 249/339 (73%), Gaps = 24/339 (7%)

Query: 158 MANDASRTGPSSSQQNQNHQSAAALTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREA 217
           MA+  SRT  S+     +      L +A  S +K K      ++ LD KTLRRLAQNREA
Sbjct: 129 MADSGSRTDTSTDMDGDDKNQ---LIEAGQSSDKSK------EKVLDQKTLRRLAQNREA 179

Query: 218 ARKSRLRKKAYVQQLETSRIKLNQLEQELQRARSQ----VNFDPQLNLMNLSVPRAAIFD 273
           ARKSRLRKKAYVQQLE SR+KL+QLEQ+LQRAR Q     N   Q N +  + P A  FD
Sbjct: 180 ARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISNIADQSNGVGANGPLA--FD 237

Query: 274 MEYARWLEDDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLI 333
            EY+RWLE+  +HI+ELR+ +N H SD +LR IV+   +H+DE+FR+KG AAK+DVFH++
Sbjct: 238 AEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAAKADVFHVL 297

Query: 334 TGMWTTSAERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGL 393
           +GMW T AERCF+W+GGFRPSEL+K+L++QL+PLTEQQ+ GIY+LQQS+ QAE+ALSQG+
Sbjct: 298 SGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDALSQGM 357

Query: 394 EQLQQSLIETIAGG-PVVDG--------MQQMVVALGKLENLEGFVRQADNLRQQTLHQL 444
           E LQQSL ET+A G P  +G        M QM +A+GKL  LEGF+RQADNLRQQTL Q+
Sbjct: 358 EALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQM 417

Query: 445 RRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMI 483
            R+LT RQ+AR  L I EY+ RLRALSSLW +RPRE ++
Sbjct: 418 HRVLTTRQSARALLAINEYFSRLRALSSLWLARPREQLV 456
Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Nicotiana tabacum (taxid: 4097)
>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2 Back     alignment and function description
>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2 Back     alignment and function description
>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1 Back     alignment and function description
>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2 Back     alignment and function description
>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1 SV=1 Back     alignment and function description
>sp|Q93ZE2|TGA7_ARATH Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1 Back     alignment and function description
>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1 Back     alignment and function description
>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
224104851487 predicted protein [Populus trichocarpa] 0.938 0.979 0.776 0.0
224131840493 predicted protein [Populus trichocarpa] 0.927 0.955 0.715 0.0
296084918500 unnamed protein product [Vitis vinifera] 0.935 0.95 0.703 0.0
356542019487 PREDICTED: TGACG-sequence-specific DNA-b 0.921 0.960 0.669 0.0
225464960472 PREDICTED: TGACG-sequence-specific DNA-b 0.879 0.947 0.708 0.0
430007897488 bZIP protein [Nelumbo nucifera] 0.938 0.977 0.678 0.0
151347477457 basic leucine zipper protein [Carica pap 0.877 0.975 0.696 1e-172
30680599481 bZIP transcription factor-like protein [ 0.913 0.964 0.622 1e-169
110743634481 bZip protein AtbZip21 [Arabidopsis thali 0.913 0.964 0.622 1e-169
356542748462 PREDICTED: TGACG-sequence-specific DNA-b 0.877 0.965 0.653 1e-166
>gi|224104851|ref|XP_002313591.1| predicted protein [Populus trichocarpa] gi|222849999|gb|EEE87546.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/518 (77%), Positives = 427/518 (82%), Gaps = 41/518 (7%)

Query: 1   MASHRIGAAGGLSHDSAGPSNLHHHHVPYATSLH------QGFINQEGPAFDFGELQEAI 54
           MASHRIG  G LS   +GPSN    H+PYA  LH        FINQEG AFDFGEL+EAI
Sbjct: 1   MASHRIGETG-LS--DSGPSN---QHLPYAL-LHGINTPSTSFINQEGSAFDFGELEEAI 53

Query: 55  VLQGVKFRNDEATKAPLFTAAAGGRPAATLEMFPSWPMRFQQTPR-GSSKSGGESISTDS 113
           VLQGVK RNDEA KAPLFT    GRPAATLEMFPSWPMRFQ+TPR GSS+SGGES  TDS
Sbjct: 54  VLQGVKIRNDEA-KAPLFTVT--GRPAATLEMFPSWPMRFQETPRVGSSRSGGES--TDS 108

Query: 114 GSALNTISSGKAEASQSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPSSSQQN 173
           GSALNT+SS KAEA    LE PESPIS   H++     +QQ V+MAND SRTG   SQQN
Sbjct: 109 GSALNTLSS-KAEA---HLE-PESPISKKKHLQ---FQEQQQVDMANDTSRTG-GPSQQN 159

Query: 174 QNHQSAAALTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREAARKSRLRKKA--YVQQ 231
           Q        + AK  QEKRKG  STS++QLDAKTLRRLAQNREAA+KSRLRKKA  YVQQ
Sbjct: 160 Q--------SPAKSPQEKRKG--STSEKQLDAKTLRRLAQNREAAKKSRLRKKARAYVQQ 209

Query: 232 LETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPR-AAIFDMEYARWLEDDQRHISEL 290
           LETSRIKL QLEQ+LQRAR Q  F         ++   AAIFDMEYARWLEDD RH+SEL
Sbjct: 210 LETSRIKLTQLEQDLQRARQQGLFLGGCGGAGGNISSGAAIFDMEYARWLEDDHRHMSEL 269

Query: 291 RSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGG 350
           R+GL  H SDGDLR+IVD YISHYDEIFRLK VAAKSDVFHLITGMW+T AERCFLWMGG
Sbjct: 270 RTGLQAHLSDGDLRVIVDGYISHYDEIFRLKVVAAKSDVFHLITGMWSTPAERCFLWMGG 329

Query: 351 FRPSELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSLIETIAGGPVV 410
           FRPSELIKMLISQLDPLTEQQVMGIYSLQQS+QQAEEALSQGLEQLQQSL++TIAGGPV+
Sbjct: 330 FRPSELIKMLISQLDPLTEQQVMGIYSLQQSSQQAEEALSQGLEQLQQSLVDTIAGGPVI 389

Query: 411 DGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRAL 470
            GMQQM VALGKL NLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRAL
Sbjct: 390 GGMQQMAVALGKLANLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRAL 449

Query: 471 SSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF 508
           SSLWASRPRETMISEDNSCQTTTDLQMVQ SQNHFSNF
Sbjct: 450 SSLWASRPRETMISEDNSCQTTTDLQMVQPSQNHFSNF 487

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224131840|ref|XP_002328121.1| predicted protein [Populus trichocarpa] gi|222837636|gb|EEE76001.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296084918|emb|CBI28327.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542019|ref|XP_003539469.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Glycine max] Back     alignment and taxonomy information
>gi|225464960|ref|XP_002276067.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|430007897|gb|AGA20434.1| bZIP protein [Nelumbo nucifera] Back     alignment and taxonomy information
>gi|151347477|gb|ABS01351.1| basic leucine zipper protein [Carica papaya] Back     alignment and taxonomy information
>gi|30680599|ref|NP_563810.2| bZIP transcription factor-like protein [Arabidopsis thaliana] gi|79317351|ref|NP_001030999.1| bZIP transcription factor-like protein [Arabidopsis thaliana] gi|14272369|emb|CAC40022.1| bZIP transcription factor [Arabidopsis thaliana] gi|309952053|gb|ADO95300.1| bZIP21 [Arabidopsis thaliana] gi|332190154|gb|AEE28275.1| bZIP transcription factor-like protein [Arabidopsis thaliana] gi|332190156|gb|AEE28277.1| bZIP transcription factor-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110743634|dbj|BAE99654.1| bZip protein AtbZip21 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356542748|ref|XP_003539827.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
TAIR|locus:2199968481 TGA9 "AT1G08320" [Arabidopsis 0.759 0.802 0.619 1.2e-122
UNIPROTKB|Q9SQK1325 TGA2.2 "BZIP transcription fac 0.555 0.867 0.606 1.8e-85
TAIR|locus:2169394330 AHBP-1B "AT5G06950" [Arabidops 0.557 0.857 0.557 2.8e-80
TAIR|locus:2082234355 TGA6 "AT3G12250" [Arabidopsis 0.557 0.797 0.564 1.8e-78
TAIR|locus:2169409330 OBF5 "AT5G06960" [Arabidopsis 0.564 0.869 0.553 7.1e-77
TAIR|locus:2026890452 PAN "AT1G68640" [Arabidopsis t 0.545 0.612 0.560 3.9e-76
TAIR|locus:2029366368 TGA7 "AT1G77920" [Arabidopsis 0.576 0.796 0.476 1e-68
TAIR|locus:2030551384 TGA3 "AT1G22070" [Arabidopsis 0.720 0.953 0.436 2.1e-68
TAIR|locus:2184078364 TGA4 "AT5G10030" [Arabidopsis 0.555 0.774 0.513 6.5e-67
TAIR|locus:2171820368 TGA1 "AT5G65210" [Arabidopsis 0.555 0.766 0.517 2.8e-66
TAIR|locus:2199968 TGA9 "AT1G08320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
 Identities = 252/407 (61%), Positives = 303/407 (74%)

Query:   107 ESISTDSG-SALNTISSGKAEAS-QSQLEQPESPISNINHI--KPSASNQQQSVEMANDA 162
             +++ T+S  S   +  SG A  S +++ +QPESP+S+ +H+  +P  +N      MAN +
Sbjct:    91 QTLPTESSKSGGESSDSGSANFSGKAESQQPESPMSSKHHLMLQPHHNN------MANSS 144

Query:   163 SRTGPXXXXXXXXXXXXXXLTDAKPSQEKRKGPGSTSDRQLDAKTLRRLAQNREAARKSR 222
             S +G               L   KPS++KRK   +TS +QLDAKTLRRLAQNREAARKSR
Sbjct:   145 STSG--------LPSTSRTLAPPKPSEDKRKA--TTSGKQLDAKTLRRLAQNREAARKSR 194

Query:   223 LRKKAYVQQLETSRIKLNQLEQELQRARSQVNFDPQLNLMNLSVPR-AAIFDMEYARWLE 281
             LRKKAYVQQLE+SRIKL+QLEQELQRARSQ  F         ++   AAIFDMEY RWLE
Sbjct:   195 LRKKAYVQQLESSRIKLSQLEQELQRARSQGLFMGGCGPPGPNITSGAAIFDMEYGRWLE 254

Query:   282 DDQRHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSA 341
             DD RH+SE+R+GL  H SD DLR+IVD YI+H+DEIFRLK VAAK+DVFHLI G W + A
Sbjct:   255 DDNRHMSEIRTGLQAHLSDNDLRLIVDGYIAHFDEIFRLKAVAAKADVFHLIIGTWMSPA 314

Query:   342 ERCFLWMGGFRPSELIKMLISQLDPLTEQQVMGIYSLQQSTXXXXXXXXXXXXXXXXXXX 401
             ERCF+WM GFRPS+LIK+L+SQ+D LTEQQ+MGIYSLQ S+                   
Sbjct:   315 ERCFIWMAGFRPSDLIKILVSQMDLLTEQQLMGIYSLQHSSQQAEEALSQGLEQLQQSLI 374

Query:   402 XTIAGGPVVDGMQQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIG 461
              T+A  PV+DGMQQM VALGK+ NLEGF+RQADNLRQQT+HQLRRILTVRQAARCFLVIG
Sbjct:   375 DTLAASPVIDGMQQMAVALGKISNLEGFIRQADNLRQQTVHQLRRILTVRQAARCFLVIG 434

Query:   462 EYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQHSQNHFSNF 508
             EYYGRLRALSSLW SRPRET++S++ SCQTTTDLQ+VQ S+NHFSNF
Sbjct:   435 EYYGRLRALSSLWLSRPRETLMSDETSCQTTTDLQIVQSSRNHFSNF 481
GO:0003677 "DNA binding" evidence=ISS
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA
GO:0043565 "sequence-specific DNA binding" evidence=IEA
GO:0046983 "protein dimerization activity" evidence=IEA
GO:0009612 "response to mechanical stimulus" evidence=RCA
GO:0019722 "calcium-mediated signaling" evidence=RCA
UNIPROTKB|Q9SQK1 TGA2.2 "BZIP transcription factor" [Nicotiana tabacum (taxid:4097)] Back     alignment and assigned GO terms
TAIR|locus:2169394 AHBP-1B "AT5G06950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082234 TGA6 "AT3G12250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169409 OBF5 "AT5G06960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026890 PAN "AT1G68640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029366 TGA7 "AT1G77920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030551 TGA3 "AT1G22070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184078 TGA4 "AT5G10030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171820 TGA1 "AT5G65210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IX.278.1
hypothetical protein (487 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
pfam1414479 pfam14144, DOG1, Seed dormancy control 7e-42
smart0033865 smart00338, BRLZ, basic region leucin zipper 2e-10
pfam0017064 pfam00170, bZIP_1, bZIP transcription factor 1e-08
pfam0771654 pfam07716, bZIP_2, Basic region leucine zipper 4e-06
cd1219354 cd12193, B_zip1, basic leucine zipper DNA-binding 1e-04
>gnl|CDD|206313 pfam14144, DOG1, Seed dormancy control Back     alignment and domain information 
 Score =  143 bits (364), Expect = 7e-42
 Identities = 51/79 (64%), Positives = 64/79 (81%)

Query: 285 RHISELRSGLNQHYSDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERC 344
           R ++ELR+ LN H SD +LR +VD  ++HYDE FRLK  AAK+DVFHL++GMW T AERC
Sbjct: 1   RLLAELRAALNAHASDDELRSLVDKVLAHYDEYFRLKSAAAKADVFHLLSGMWKTPAERC 60

Query: 345 FLWMGGFRPSELIKMLISQ 363
           FLW+GGFRPSEL+K+L S 
Sbjct: 61  FLWIGGFRPSELLKLLYSL 79

This family of plant proteins appears to be a highly specific controller seed dormancy. Length = 79
>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper Back     alignment and domain information
>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor Back     alignment and domain information
>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper Back     alignment and domain information
>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 508
PF1414480 DOG1: Seed dormancy control 99.97
smart0033865 BRLZ basic region leucin zipper. 98.63
PF0017064 bZIP_1: bZIP transcription factor cAMP response el 98.54
PF0771654 bZIP_2: Basic region leucine zipper; InterPro: IPR 98.45
KOG3584348 consensus cAMP response element binding protein an 97.79
PF13801125 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 96.8
KOG4343655 consensus bZIP transcription factor ATF6 [Transcri 96.2
COG3678160 CpxP P pilus assembly/Cpx signaling pathway, perip 96.19
PF0313192 bZIP_Maf: bZIP Maf transcription factor; InterPro: 96.03
KOG0709472 consensus CREB/ATF family transcription factor [Tr 95.66
PRK12750170 cpxP periplasmic repressor CpxP; Reviewed 95.19
KOG0837279 consensus Transcriptional activator of the JUN fam 92.71
PRK10363166 cpxP periplasmic repressor CpxP; Reviewed 92.55
PRK10455161 periplasmic protein; Reviewed 91.83
KOG4005292 consensus Transcription factor XBP-1 [Transcriptio 91.81
PF07813100 LTXXQ: LTXXQ motif family protein; InterPro: IPR01 91.21
PRK12751162 cpxP periplasmic stress adaptor protein CpxP; Revi 89.58
KOG3119269 consensus Basic region leucine zipper transcriptio 81.98
>PF14144 DOG1: Seed dormancy control Back     alignment and domain information 
Probab=99.97  E-value=7.1e-33  Score=231.60  Aligned_cols=79  Identities=57%  Similarity=1.044  Sum_probs=76.7

Q ss_pred             HHHHHHHHhhccCC-CCchHHHHHHHHHHHHHHHHHHHHhhhccccchhccCCCcchHHHHHhHhcCCCchHHHHHHHhh
Q 036039          285 RHISELRSGLNQHY-SDGDLRIIVDAYISHYDEIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPSELIKMLISQ  363 (508)
Q Consensus       285 r~l~ELRaAL~s~~-sD~ELr~LVd~vlsHY~eyfr~Ks~AAk~DVF~llSg~W~TPlER~FLWIGGfRPSellkLL~~q  363 (508)
                      |++.|||++|+++. +|.+|+.||++||+||++||++|+.||++|||++|+|+|+||+|||||||||||||++||||+++
T Consensus         1 ~~l~eLr~al~~~~~~~~~L~~lV~~~~~Hy~~y~~~K~~aa~~DV~~~~s~~W~sp~Er~flWiGG~RPS~~~~ll~s~   80 (80)
T PF14144_consen    1 RQLNELRAALQSHADSDDELRSLVDKVMSHYDEYYRAKSAAAKADVFHLLSPPWKSPLERCFLWIGGWRPSELFKLLYSQ   80 (80)
T ss_pred             CcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHhCCCCCCHHHHHHHHHhcCCHHHHHHHHhcC
Confidence            57899999999998 89999999999999999999999999999999999999999999999999999999999999875

>smart00338 BRLZ basic region leucin zipper Back     alignment and domain information
>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization Back     alignment and domain information
>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization Back     alignment and domain information
>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription] Back     alignment and domain information
>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H Back     alignment and domain information
>KOG4343 consensus bZIP transcription factor ATF6 [Transcription] Back     alignment and domain information
>COG3678 CpxP P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell Back     alignment and domain information
>KOG0709 consensus CREB/ATF family transcription factor [Transcription] Back     alignment and domain information
>PRK12750 cpxP periplasmic repressor CpxP; Reviewed Back     alignment and domain information
>KOG0837 consensus Transcriptional activator of the JUN family [Transcription] Back     alignment and domain information
>PRK10363 cpxP periplasmic repressor CpxP; Reviewed Back     alignment and domain information
>PRK10455 periplasmic protein; Reviewed Back     alignment and domain information
>KOG4005 consensus Transcription factor XBP-1 [Transcription] Back     alignment and domain information
>PF07813 LTXXQ: LTXXQ motif family protein; InterPro: IPR012899 This five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP (P32158 from SWISSPROT) Back     alignment and domain information
>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed Back     alignment and domain information
>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1dh3_A55 Transcription factor CREB; protein-DNA complex, tr 2e-08
1t2k_D61 Cyclic-AMP-dependent transcription factor ATF-2; p 3e-08
1jnm_A62 Proto-oncogene C-JUN; BZIP, protein-DNA complex, t 7e-08
2dgc_A63 Protein (GCN4); basic domain, leucine zipper, DNA 3e-06
1ci6_A63 Transcription factor ATF-4; BZIP; 2.60A {Homo sapi 6e-06
3a5t_A107 Transcription factor MAFG; protein-DNA complex, BZ 7e-06
2wt7_B90 Transcription factor MAFB; transcription, transcri 8e-06
2wt7_A63 Proto-oncogene protein C-FOS; transcription, trans 1e-05
1gd2_E70 Transcription factor PAP1; basic leucine zipper, p 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.3 bits (153), Expect = 1e-10
 Identities = 70/519 (13%), Positives = 152/519 (29%), Gaps = 148/519 (28%)

Query: 23  HHHHVPYATSLHQ------------GFINQEGPAFDFGELQEAI--VLQGVKFRNDEATK 68
           HHHH+ + T  HQ             F++     FD  ++Q+    +L   +   D    
Sbjct: 3   HHHHMDFETGEHQYQYKDILSVFEDAFVDN----FDCKDVQDMPKSILSKEEI--DHIIM 56

Query: 69  APLFTAAAGGRPAATLEMFPSWPMRFQQTPRGSSKSGGESISTDSGSALNTISSGKAEAS 128
           +           + TL +F  W +  +Q      K   E +  +    ++ I        
Sbjct: 57  SK-------DAVSGTLRLF--WTLLSKQE-EMVQKFVEEVLRINYKFLMSPI-------- 98

Query: 129 QSQLEQPESPISNINHIKPSASNQQQSVEMANDASRTGPSSSQQNQNHQSAAALTDAKPS 188
           +++  QP          +    N  Q     N  SR  P    +        AL + +P+
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN-VSRLQPYLKLRQ-------ALLELRPA 150

Query: 189 Q----EKRKGPGSTSDRQLDAKTLRRLAQNREAARKSRLRKKAY---VQQLETSRIKLNQ 241
           +    +   G G T    +                + ++  K +   ++   +    L  
Sbjct: 151 KNVLIDGVLGSGKTW---VALDVC------LSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 242 LEQELQRARSQVNFDPQLNLMNLSVPRAAIFDMEYARWLEDDQRHISELRSGLNQHYSDG 301
           L Q+L         DP                   +    + +  I  +++ L +     
Sbjct: 202 L-QKLLY-----QIDPNWT--------------SRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 302 DLR---IIVDAYISHYD----EIFRLKGVAAKSDVFHLITGMWTTSAERCFLWMGGFRPS 354
                 +++       +    + +    ++ K     L+    TT  ++   ++     +
Sbjct: 242 PYENCLLVLL------NVQNAKAWNAFNLSCKI----LL----TTRFKQVTDFLSAATTT 287

Query: 355 ELIKMLISQLDPLTEQQVMGIYSLQQSTQQAEEALSQGLEQLQQSL-IETIAGGPVVDGM 413
            +   L      LT  +V  +             L + L+   Q L  E +   P    +
Sbjct: 288 HIS--LDHHSMTLTPDEVKSL-------------LLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 414 QQMVVALGKLENLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIG-----EYYGRL- 467
                 +   E++   +   DN +     +L  I+          V+      + + RL 
Sbjct: 333 ------IA--ESIRDGLATWDNWKHVNCDKLTTII-----ESSLNVLEPAEYRKMFDRLS 379

Query: 468 ----------RALSSLWASRPRETMISEDNSCQTTTDLQ 496
                       LS +W    +  ++   N     + ++
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55 Back     alignment and structure
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61 Back     alignment and structure
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62 Back     alignment and structure
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63 Back     alignment and structure
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63 Back     alignment and structure
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107 Back     alignment and structure
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90 Back     alignment and structure
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63 Back     alignment and structure
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
1dh3_A55 Transcription factor CREB; protein-DNA complex, tr 98.95
2dgc_A63 Protein (GCN4); basic domain, leucine zipper, DNA 98.48
1jnm_A62 Proto-oncogene C-JUN; BZIP, protein-DNA complex, t 98.29
1t2k_D61 Cyclic-AMP-dependent transcription factor ATF-2; p 98.23
2wt7_A63 Proto-oncogene protein C-FOS; transcription, trans 98.22
1gd2_E70 Transcription factor PAP1; basic leucine zipper, p 97.88
2y39_A118 Nickel and cobalt resistance protein CNRR; metal b 97.25
1ci6_A63 Transcription factor ATF-4; BZIP; 2.60A {Homo sapi 96.97
1gu4_A78 CAAT/enhancer binding protein beta; transcription/ 95.95
3a5t_A107 Transcription factor MAFG; protein-DNA complex, BZ 95.76
1hjb_A87 Ccaat/enhancer binding protein beta; transcription 95.18
3itf_A145 Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxr 94.88
2wt7_B90 Transcription factor MAFB; transcription, transcri 87.22
3oeo_A138 Spheroplast protein Y; LTXXQ, extracytoplasmic str 86.94
3o39_A108 Periplasmic protein related to spheroblast format; 85.96
3lay_A175 Zinc resistance-associated protein; salmonella typ 82.39
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Back     alignment and structure
Probab=98.95  E-value=8.7e-10  Score=85.80  Aligned_cols=44  Identities=43%  Similarity=0.566  Sum_probs=39.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHhhHHHHHHHHhhc
Q 036039          206 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARSQ  252 (508)
Q Consensus       206 k~~RRLAQNREaARkSRlRKKaYvqqLE~sr~kL~qLeqel~rar~q  252 (508)
                      |.++|+..|||+|+.||.|||+||+.||.   ++.+|+.|-...+.+
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~---~v~~L~~eN~~L~~~   44 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLEN---RVAVLENQNKTLIEE   44 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999   688999988777654
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Back     alignment and structure
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Back     alignment and structure
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Back     alignment and structure
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Back     alignment and structure
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A* Back     alignment and structure
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Back     alignment and structure
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Back     alignment and structure
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A Back     alignment and structure
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Back     alignment and structure
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli} Back     alignment and structure
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli} Back     alignment and structure
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00