Citrus Sinensis ID: 036050

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
Protein Sequence
MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccHHHccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccHHHcccccccccccccHEcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHccHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mapkkpnpmeeppaassseeveedddssgseevsssdgdgeedaqepaktqspppqkshkqsavkkpeatpatpqtkslssgesesesesesepdatpkpiatkpmeetpkvtkprskplsskrpneteesaKDSKrakkkspeadpdeeeqkkpgedtKKQLFQRLWSEDDEIVVLKgmtdystkkgldpnqdmqGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNlgkgkkkgedrtfskpheqkaydlskkfwggestggviesaaksngkpkknqnqkgnSKSLAALKAELtdgaegdkmevdndkgnavnktvnlkdkdkvlfdkslgvagleefvlHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Flexible Loop (DISEMBL)
mapkkpnpmeeppaassseeveedddssgseevsssdgdgeedaqepaktqspppqkshkqsavkkpeatpatpqtkslssgesesesesesepdatpkpiatkpmeetpkvtkprskplsskrpneteesakdskrakkkspeadpdeeeqkkpgedtkKQLFQRLWSEDDEIVVLKGMtdystkkgldpnQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKkfennlgkgkkkgedrtfskpheqkaydlskkfwgGESTGGVIESaaksngkpkknqnqkgnsksLAALKAELtdgaegdkmevdndkgnavnktvnlkdkdkvlFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Low Complexity Region (SEG)
MAPKKPNPMEEPPAAssseeveedddssgseevsssdgdgeedAQEPAKTQSPPPQKSHKQSAVKKPEATPATPQTKslssgesesesesesePDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETEEsakdskrakkksPEADPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRlkkkfennlgkgkkkgeDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAksngkpkknqnqkgnsksLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Disordered region (IsUnstruct)
******************************************************************************************************************************************************************LFQRLWSEDDEIVVLKGMTDYST********DMQGFYDYIKNSLHVDV**************************************************************************************************************NLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLI*****
Disordered Region (DISOPRED)
*************************************************************************************************************************************************************************EDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNL**************PHEQKAYDLSKKFWG*******************************************************************************************************WKELQVAQLELFLQRNELIKEQAKLILEAMK
Disordered Region (DISEMBL)
**************************************************************************************************KPIATKPME***************************************************TKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLG***************EQKAYDLSKKFWGGESTGGVIESAA***************SKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Disordered Region (DISPRO)
*****************************************************************************************************************************************************************QLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGE********************************************************************FDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	393	2.2.26 [Sep-21-2011]
Q9SB42	368	Mediator-associated prote	no	no	0.694	0.741	0.353	5e-30

>sp|Q9SB42|MDA1_ARATH Mediator-associated protein 1 OS=Arabidopsis thaliana GN=At4g25210 PE=1 SV=1

 Score =  132 bits (332), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 41/314 (13%)

Query: 99  KPIATKPMEETP--KVTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKP- 155
           KP+ TKP+ ET     T P S   ++KRP   +E+A ++ + +K S     D E  KKP 
Sbjct: 74  KPVGTKPIPETSGSAATVPESS--TAKRP--LKEAAPEAIKKQKTS-----DTEHVKKPI 124

Query: 156 ---------GEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSL 206
                     ED KK +FQRL+SE DEI +L+G+ D+++ KG DP +D+  F  Y+K  +
Sbjct: 125 TNDEVKKISSEDAKK-MFQRLFSETDEIALLQGIIDFTSTKG-DPYEDIDAFCIYVKKLI 182

Query: 207 HVDVSKAQLVDKIRRLKKKFENNLGKGKKKG---EDRTFSKPHEQKAYDLSKKFWGGEST 263
             D +K Q+V K++RLKKKF N +    KKG   +D  F+K  EQK ++LS+K WG  S 
Sbjct: 183 DFDATKNQIVTKLQRLKKKFNNAVKNSLKKGKTEDDIEFAKDLEQKGFELSRKIWG--SN 240

Query: 264 GGVI---ESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTV 320
           G ++    S  K  G P   + +      L A         E  K E    +   VN  +
Sbjct: 241 GVLVTGKSSRKKVGGTPAPKEMK------LVAHSTPKKQQEEAKKPE--RTEAKVVNTGL 292

Query: 321 NLKDKDKVLFDKSLG-VAGLEEFVLHDGLDMI-EGAKKAELEERWKELQVAQLELFLQRN 378
           ++  +     +   G   GL+E  L      + +GA+K E+EE+WK+L+  Q EL LQR+
Sbjct: 293 SIGKEIASFLNADNGSSCGLDESTLTAVWAKVADGAEKREVEEKWKKLKAKQFELCLQRS 352

Query: 379 ELIKEQAKLILEAM 392
            L+ E AK+I +A 
Sbjct: 353 GLVNETAKMIFKAY 366

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	393
255555073	391	transcription regulator, putative [Ricin	0.949	0.953	0.501	4e-81
449479419	414	PREDICTED: mediator-associated protein 1	0.758	0.719	0.520	9e-74
224060796	380	predicted protein [Populus trichocarpa]	0.910	0.942	0.486	3e-70
118482785	387	unknown [Populus trichocarpa]	0.923	0.937	0.464	8e-69
224105725	381	predicted protein [Populus trichocarpa]	0.923	0.952	0.464	8e-69
359497352	437	PREDICTED: uncharacterized protein LOC10	0.867	0.780	0.407	2e-56
356546712	448	PREDICTED: uncharacterized protein LOC10	0.730	0.640	0.402	3e-47
255549307	383	transcription regulator, putative [Ricin	0.819	0.840	0.369	6e-42
356557619	437	PREDICTED: uncharacterized protein LOC10	0.740	0.665	0.401	3e-40
356514056	355	PREDICTED: uncharacterized protein LOC10	0.725	0.802	0.387	4e-37

>gi|255555073|ref|XP_002518574.1| transcription regulator, putative [Ricinus communis] gi|223542419|gb|EEF43961.1| transcription regulator, putative [Ricinus communis]

 Score =  308 bits (788), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 204/407 (50%), Positives = 267/407 (65%), Gaps = 34/407 (8%)

Query: 1   MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHK 60
           MAPK+  P+E+PPAASSSEE EE   S   EE    +     + ++         +    
Sbjct: 1   MAPKRSTPLEDPPAASSSEEEEEGTSSGEEEEEEEEEEGSSSEEEQ---------ETQKP 51

Query: 61  QSAVKKPEATPATPQTKSLSSGESESESESESEP----DATPKPIATKPMEETP-KVTKP 115
           Q+ +  P+  P  P+++S S   S SE++ + +P    ++T KPIA+KPMEETP K TKP
Sbjct: 52  QTQIVTPKPPPKQPESESESESGSGSETDDDEKPKKAPNSTVKPIASKPMEETPPKTTKP 111

Query: 116 RSKPLSS--------KRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQRL 167
           RSKP           KR +E +   KDSKRAKKK PE+D       +  EDTKKQLFQRL
Sbjct: 112 RSKPAPKPTTAAAAGKRASEVDREPKDSKRAKKKDPESDGAVTATAEKSEDTKKQLFQRL 171

Query: 168 WSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFE 227
           WSEDDEIVVLKG+ D+  KKG+DP +D+  F+DYIK SLH DVS  QL DKI RLKKKFE
Sbjct: 172 WSEDDEIVVLKGIIDFIEKKGVDPAKDIISFFDYIKKSLHFDVSLNQLKDKIWRLKKKFE 231

Query: 228 NNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQKGNS 287
           NN+ KG KKGED+TFSK H+QK++DLSKK WG +   G  +S+ K NGK KK  N   N+
Sbjct: 232 NNV-KG-KKGEDKTFSKSHDQKSFDLSKKIWGTDGIIGASDSSIKPNGKAKKATN--NNA 287

Query: 288 KSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKV-LFDKSLGVAGLEEFVLHD 346
           KSL ALKAEL        M+VD +        V L++   +  FD+ +GV+G+E++V+  
Sbjct: 288 KSLVALKAELG-------MDVDKENEKVDKMDVELENHSSLKQFDRGVGVSGMEDYVIKR 340

Query: 347 GLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
           GLDM++GAKKAE+EE+W++L VA+LELFL+RNEL +EQAKL+L + K
Sbjct: 341 GLDMVQGAKKAEMEEKWRKLHVAELELFLRRNELTREQAKLMLASYK 387

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479419|ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 214/323 (66%), Gaps = 25/323 (7%)

Query: 87  ESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETE-----ESAKDSKRAKKK 141
           +++S++E     KPIA+KPM+ETPKV KPRSKP +S  P         E+ +D+KR KK 
Sbjct: 97  DTDSDTESGRNVKPIASKPMDETPKVKKPRSKPSASVTPARPSLKKPGETTRDAKRPKKS 156

Query: 142 SPEADPDE----EEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQG 197
           S EAD D+    E+  K   D  K+LFQRLWSEDDEI +L GM DYS KKG DP+ DM  
Sbjct: 157 S-EADADDGIVAEDDSKKSVDESKKLFQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMNA 215

Query: 198 FYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKF 257
           F+D+IK SLHVDV+KAQL+DKIRRLKKK+ NN  +G KKG D TFSK H+QK ++LSK+ 
Sbjct: 216 FHDFIKKSLHVDVTKAQLMDKIRRLKKKYRNNADRG-KKGADPTFSKAHDQKGFELSKRI 274

Query: 258 WGGES---TGGVIESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGA----EGDKMEVDN 310
           WGGE    T  V +    +NG PKKNQ +   SK+LA+LKAEL        E DKM+VD+
Sbjct: 275 WGGEGFLRTPAVDQLKPNANGTPKKNQ-RGSTSKALASLKAELLPSPDAPKEDDKMKVDD 333

Query: 311 DKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQ 370
                        D   V F++SLG  GL E  L  GL++I  +K+ ELEE WK+L +A+
Sbjct: 334 -----CEVPSGCMD-GFVAFERSLGAVGLPESFLKPGLELIGQSKRTELEEEWKKLHLAE 387

Query: 371 LELFLQRNELIKEQAKLILEAMK 393
           LELFL+R ELI++Q KLIL+A K
Sbjct: 388 LELFLKRTELIRDQTKLILDAYK 410

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060796|ref|XP_002300270.1| predicted protein [Populus trichocarpa] gi|222847528|gb|EEE85075.1| predicted protein [Populus trichocarpa]

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 200/411 (48%), Positives = 261/411 (63%), Gaps = 53/411 (12%)

Query: 1   MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPA----KTQSPPPQ 56
           MAPK+P P+E+PP+AS SEE EE+D SS  EE      DGE+    P     KTQ+PP  
Sbjct: 1   MAPKRPPPVEDPPSASISEEEEEEDSSSAEEEEEQQQSDGEQRQPSPPQPQNKTQNPP-- 58

Query: 57  KSHKQSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETP------ 110
             HK            T  T   S  +SESES SESEPD   KPI +KPMEETP      
Sbjct: 59  --HK-----------ITETTTQQSESDSESESASESEPDQIVKPITSKPMEETPPKAASA 105

Query: 111 KVTKPRSKPLSSKRPNET-------EESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQL 163
              KPRSKP ++  P +T       E   +DSKRAK K P  DP+     KP ED+KKQL
Sbjct: 106 ASKKPRSKPATAATPEKTTALKRGNETDREDSKRAKNKEP--DPE-----KP-EDSKKQL 157

Query: 164 FQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLK 223
           FQRLW+EDDEI +L+G+ D++ KKG DP++DM  FYD+IK SLH DVS  QL DKI RLK
Sbjct: 158 FQRLWTEDDEIALLRGIIDFTAKKGYDPSKDMNAFYDFIKKSLHFDVSMTQLKDKISRLK 217

Query: 224 KKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQ 283
           KKFEN++ KG KKGE++TFSKPH+QK +DLSK  WG  S G + ++  K++     N N+
Sbjct: 218 KKFENHV-KG-KKGENKTFSKPHDQKGFDLSKSIWG--SDGSIKDNGRKNDSGNTSNNNK 273

Query: 284 KGNSKSLAALKAEL-TDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEF 342
            GN+K   A K EL  D  E D++EV+  +G++V        K  + FD ++ V  +E++
Sbjct: 274 TGNAKKPEASKPELGMDVGEEDRVEVEMARGSSV--------KSVLKFDSNVSVERMEDY 325

Query: 343 VLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
           V+  GL+ + G +K ++EE W++L VA+LELFL+RNELI+EQAKL+L A K
Sbjct: 326 VVRMGLNFVHGTEKEKMEEEWRKLHVAELELFLKRNELIREQAKLMLTAFK 376

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482785|gb|ABK93310.1| unknown [Populus trichocarpa]

 Score =  267 bits (682), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 189/407 (46%), Positives = 253/407 (62%), Gaps = 44/407 (10%)

Query: 1   MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHK 60
           MAPK+  P+E+PP+ASSSEE         +        D E+    P + Q+   +  + 
Sbjct: 7   MAPKRAPPVEDPPSASSSEE------EEETSSGEEEASDDEQSHPSPPQPQTKTIRTQN- 59

Query: 61  QSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETP-----KVTKP 115
            SA KKPE T    +++  S   SESESESESEPD + KPI +KPMEETP      V K 
Sbjct: 60  -SAPKKPEPTTQQSESELESDSGSESESESESEPDQSVKPITSKPMEETPPKEAAAVKKS 118

Query: 116 RSKP---------LSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQR 166
           RSKP          + KR N  +  +KD KRAK K  E++P++       ED+KKQLFQR
Sbjct: 119 RSKPAVAATPEKSTAVKRGNGADRDSKDLKRAKSK--ESEPEK------SEDSKKQLFQR 170

Query: 167 LWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKF 226
           LW+E+DEI +L+G+ D+  +KG DP++DM  FYD+IK SLH DVS  QL DKI RL+KKF
Sbjct: 171 LWTEEDEIALLQGIIDFIAEKGYDPSKDMNAFYDFIKRSLHFDVSMTQLKDKISRLRKKF 230

Query: 227 ENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQKGN 286
           EN++ KG KKGE + FSKPH+QK +DLSK  WG E   G I++  K N     N N+KGN
Sbjct: 231 ENHV-KG-KKGESKIFSKPHDQKGFDLSKYIWGSE---GTIKANGKKNN--NSNDNRKGN 283

Query: 287 SKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHD 346
           +K L ALKAEL        M+V  ++   V    +   K  + FD S+    ++++V+ +
Sbjct: 284 AKKLEALKAELG-------MDVGEEERMEVEMERDSSVKKVLKFDGSVSGGKMDDYVVRN 336

Query: 347 GLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
           GLD   G KKAE+EE+W++L +A+LELFL+RNELI+EQAKL+L A K
Sbjct: 337 GLDFAHGMKKAEMEEKWRKLHMAELELFLKRNELIREQAKLMLSAFK 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105725|ref|XP_002313912.1| predicted protein [Populus trichocarpa] gi|222850320|gb|EEE87867.1| predicted protein [Populus trichocarpa]

 Score =  267 bits (682), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 189/407 (46%), Positives = 253/407 (62%), Gaps = 44/407 (10%)

Query: 1   MAPKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHK 60
           MAPK+  P+E+PP+ASSSEE         +        D E+    P + Q+   +  + 
Sbjct: 1   MAPKRAPPVEDPPSASSSEE------EEETSSGEEEASDDEQSHPSPPQPQTKTIRTQN- 53

Query: 61  QSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETP-----KVTKP 115
            SA KKPE T    +++  S   SESESESESEPD + KPI +KPMEETP      V K 
Sbjct: 54  -SAPKKPEPTTQQSESELESDSGSESESESESEPDQSVKPITSKPMEETPPKEAAAVKKS 112

Query: 116 RSKP---------LSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQR 166
           RSKP          + KR N  +  +KD KRAK K  E++P++       ED+KKQLFQR
Sbjct: 113 RSKPAVAATPEKSTAVKRGNGADRDSKDLKRAKSK--ESEPEK------SEDSKKQLFQR 164

Query: 167 LWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKF 226
           LW+E+DEI +L+G+ D+  +KG DP++DM  FYD+IK SLH DVS  QL DKI RL+KKF
Sbjct: 165 LWTEEDEIALLQGIIDFIAEKGYDPSKDMNAFYDFIKRSLHFDVSMTQLKDKISRLRKKF 224

Query: 227 ENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAKSNGKPKKNQNQKGN 286
           EN++ KG KKGE + FSKPH+QK +DLSK  WG E   G I++  K N     N N+KGN
Sbjct: 225 ENHV-KG-KKGESKIFSKPHDQKGFDLSKYIWGSE---GTIKANGKKNN--NSNDNRKGN 277

Query: 287 SKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHD 346
           +K L ALKAEL        M+V  ++   V    +   K  + FD S+    ++++V+ +
Sbjct: 278 AKKLEALKAELG-------MDVGEEERMEVEMERDSSVKKVLKFDGSVSGGKMDDYVVRN 330

Query: 347 GLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
           GLD   G KKAE+EE+W++L +A+LELFL+RNELI+EQAKL+L A K
Sbjct: 331 GLDFAHGMKKAEMEEKWRKLHMAELELFLKRNELIREQAKLMLSAFK 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497352|ref|XP_003635491.1| PREDICTED: uncharacterized protein LOC100854363 isoform 1 [Vitis vinifera] gi|359497354|ref|XP_003635492.1| PREDICTED: uncharacterized protein LOC100854363 isoform 2 [Vitis vinifera] gi|296086994|emb|CBI33256.3| unnamed protein product [Vitis vinifera]

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 220/373 (58%), Gaps = 32/373 (8%)

Query: 52  SPPPQKSHKQSAVKKPEATPA--TPQTKSLSSGESESESESESEP----------DATPK 99
           +PPP    K S+ K    TPA  TPQ+ S    +          P          D T K
Sbjct: 62  TPPPAVDKKASSNKLVATTPAKSTPQSSSEDEEDGSESESESDSPPKSRRSSRGADPTIK 121

Query: 100 PIATKPMEETPKVTKPRSKP----------------LSSKRPNETEESAKDSKRAKKKSP 143
           PIATKPMEETPK  K RSKP                 +SKRP E     K+SKRAKKK P
Sbjct: 122 PIATKPMEETPKSKKARSKPGVSVTPSPVKSSPVKPSNSKRPGEIGLERKESKRAKKKEP 181

Query: 144 EADPDEE-EQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGL--DPNQDMQGFYD 200
           EA+ +EE + KK G+D+KKQ+FQR+WSE+DE+ +LKGM DYS K G    PN DM  FYD
Sbjct: 182 EAEAEEEEDGKKTGDDSKKQMFQRIWSEEDELGILKGMIDYSAKNGSVPYPNGDMNEFYD 241

Query: 201 YIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGG 260
           ++KN+LH D S+ QL DK RRLKKK+ NN+ + K  GED TF KPHEQ+A++LSKK WGG
Sbjct: 242 FVKNTLHGDFSRVQLTDKARRLKKKYSNNVSRAKL-GEDPTFQKPHEQRAFELSKKIWGG 300

Query: 261 ESTGGVIESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGAEGDKMEVDNDKGNAVNKTV 320
           E     ++ + K+NGK +KNQ      K        + +G + + ++++N+  +   K  
Sbjct: 301 EGNSVGVQQSNKANGKARKNQKPNKAVKVEDVEVLSVINGDDKEAVKLENEPKSEPPKKY 360

Query: 321 NLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNEL 380
           +L   D    ++S+G++   +  +  GL ++    KAEL+E+WKEL+  + +L++++ +L
Sbjct: 361 SLVVSDFTRINESVGMSSSMDRAIEIGLGLLSEPLKAELKEKWKELEDEEFQLYMKKLDL 420

Query: 381 IKEQAKLILEAMK 393
           I+ +A++ ++A +
Sbjct: 421 IQMEARVSMQAYR 433

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546712|ref|XP_003541767.1| PREDICTED: uncharacterized protein LOC100807745 [Glycine max]

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 61/348 (17%)

Query: 94  PDATP---KPIATKPMEETPKVTKPRSKP-------LSSKRP---NETEESAKDSKRAKK 140
           PD TP   KP+A+KPM++     KP+++P       L+ KRP   N       DSKRAKK
Sbjct: 110 PDPTPVKVKPLASKPMDQA---QKPKAQPSPAPPPKLTLKRPAENNNNNARVADSKRAKK 166

Query: 141 KSPEA-------------DPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKK 187
           K+ E+             D  EE+ KK G+++KK  FQRLWSE+DE+ ++KG+ ++++K 
Sbjct: 167 KATESSSAANSAAAAASDDEMEEDGKKSGDNSKK--FQRLWSEEDELAIVKGVVEFTSKT 224

Query: 188 GLDPNQ--DMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKP 245
           GLDP +  +   F+D++K SLHV+VS  QL +K+RRLKKKFE   GKGK  GE   FSKP
Sbjct: 225 GLDPLKFPNTNAFHDFVKKSLHVEVSCNQLKEKVRRLKKKFETQAGKGKN-GEAPKFSKP 283

Query: 246 HEQKAYDLSKKFWGGEST----GGVIESAAKSNGK----PKKNQNQKGNSKS-------- 289
           H+QK ++LSKK WG E T    GG +E   KSNG     PKK ++   N  S        
Sbjct: 284 HDQKFFELSKKVWGREVTAGANGGPVEKP-KSNGSAVKSPKKKESGSRNVASAKKPKPES 342

Query: 290 ----LAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLH 345
               +  L  E  D    +KM++ N K +  + ++ L++  +    +   +  L+E  + 
Sbjct: 343 KPEPVPVLSLEYKDS---EKMQI-NQKPDGGDASLFLRELARS--KEGASICKLDEDDVK 396

Query: 346 DGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
            GL++I  +K+AEL  +WK+L +A++ELF  R+ELI EQ KLILEA++
Sbjct: 397 RGLELIGESKRAELRGKWKKLHLAEMELFANRSELIGEQTKLILEALQ 444

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549307|ref|XP_002515707.1| transcription regulator, putative [Ricinus communis] gi|223545144|gb|EEF46654.1| transcription regulator, putative [Ricinus communis]

 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 192/371 (51%), Gaps = 49/371 (13%)

Query: 39  DGEEDAQEPAKTQSPPPQKSHKQSAVKKPEATPATPQTKSLSSGESESESESESEPDATP 98
           D E D   P   +    ++  K+S V K    PATPQ    S   +ES+    ++P  + 
Sbjct: 42  DDENDNGNPDDDEEEEEEEEDKESPVSKKSVVPATPQK---SDSATESDDSESTQPSPSL 98

Query: 99  KPIATKPMEETPKVTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGED 158
                K    +PK     +K  SSKRP E++     +K   KK P A   E+E  K G  
Sbjct: 99  SAFTIKLYNRSPK----PNKTASSKRPAESDSMGPTNK---KKKPTAGVGEDEVVKRGA- 150

Query: 159 TKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDK 218
                 QRLWSEDDEIVVL G++ Y ++KG DP  +M  FY+YIK SLHVDVS+ QL+DK
Sbjct: 151 -----VQRLWSEDDEIVVLNGLSQYKSEKGADPYSEMGAFYEYIKKSLHVDVSRNQLIDK 205

Query: 219 IRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWGGE------------STGGV 266
           IRRLKKK+ NN+    K+G+D  F+K H++K++ LSKK WG              + GGV
Sbjct: 206 IRRLKKKYGNNM----KRGQDPVFTKSHDEKSFQLSKKLWGKNDQNVNNDNDDNIAGGGV 261

Query: 267 IESAAKSNGKPKKNQNQKGNSKSLAALKAELTDGAEG-DKMEVDNDKGNAVNKTVNLKDK 325
                          NQ  + K + A   E  D  +  +K+E      +AV K   + +K
Sbjct: 262 TLGLL---------ANQLSSKKPIRAPNVEEKDQIKSKEKIETK----SAVVKGEGVWEK 308

Query: 326 DKVLFDKSLGVAGLEEFV---LHDGLDMIEGAKKAELEERWKELQVAQLELFLQRNELIK 382
              L +      GL + V   L   L MIE  K  EL+++WK+L+ A+LELF+QR EL+ 
Sbjct: 309 YPSLSEALESEEGLSDGVKVSLRKHLGMIEKGKLKELDDKWKKLRQAELELFVQRMELVH 368

Query: 383 EQAKLILEAMK 393
           +Q +L L ++K
Sbjct: 369 DQVQLALHSIK 379

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557619|ref|XP_003547113.1| PREDICTED: uncharacterized protein LOC100791520 [Glycine max]

 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 196/341 (57%), Gaps = 50/341 (14%)

Query: 94  PDATP---KPIATKPMEETPKVTKPRSKPLSSK-----RP---NETEESAKDSKRAKKKS 142
           P  TP   KP+A+KPM++  K     S           RP   N       D KRAKKK+
Sbjct: 102 PHPTPVKVKPLASKPMDQAQKPKAQPSPAPPPPKSASKRPAENNNNNARVADPKRAKKKA 161

Query: 143 PEA--------DPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQ- 193
            E+        D  EE+ KK G+++KK  FQRLWSE+DE+ +LKG+ ++++K GLDP + 
Sbjct: 162 TESSSAAAISDDEMEEDGKKSGDNSKK--FQRLWSEEDELAILKGVVEFTSKTGLDPLKF 219

Query: 194 -DMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYD 252
            +   F+D++K SLHV+ S  QL +K+RRLKKKFE   GKGK  G+   FSKPH+QK ++
Sbjct: 220 PNANAFHDFMKKSLHVEFSSNQLKEKLRRLKKKFETQAGKGKN-GDAPKFSKPHDQKFFE 278

Query: 253 LSKKFWGGESTGGVIESAA---KSNGKPKKNQNQK---GNSKSLAALK------------ 294
           LSKK WG E  GGV   +    KSNG   K+ N K     S+++A+ K            
Sbjct: 279 LSKKAWGSED-GGVANGSVEKPKSNGNAAKSPNPKKKESGSRNVASAKKPKPETNPEPAP 337

Query: 295 AELTDGAEGDKMEVDN--DKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIE 352
               +  E ++ME+D   D G+A      L  ++ V + +   V+ L+E  +  GL++IE
Sbjct: 338 VPSLEFKESERMEIDQKPDGGDAC-----LFLRELVRYKEGANVSRLDEDDVKRGLELIE 392

Query: 353 GAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
            +K+AEL  +WK+L  A++ELF  R+ELI EQ KLILEA++
Sbjct: 393 ESKRAELRGKWKKLHHAEMELFANRSELIGEQTKLILEALR 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514056|ref|XP_003525723.1| PREDICTED: uncharacterized protein LOC100782985 [Glycine max]

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 176/315 (55%), Gaps = 30/315 (9%)

Query: 88  SESESEPDATPKPIATKPMEETPKVTKPRSKP----LSSKRPNETEESAKDSKRAKKK-- 141
           S S+S+ D  P  +  KP   T +  KP+  P      SKRP +    A D KRAKKK  
Sbjct: 62  SSSDSDTDFEPTKVKPKP---TDQAQKPQPSPAPPKWGSKRPAQNNAPATDPKRAKKKLT 118

Query: 142 --SPEADPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFY 199
             S  A   E E+K  G   K  L QRL+S++DE+ +LKGM ++ +K G DP +    F 
Sbjct: 119 NSSSAAAAHETEEKSGGGQAK--LSQRLFSKEDELAILKGMAEFISKTGQDPYKYADAFQ 176

Query: 200 DYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWG 259
           +++KNSL V+ S  Q+ +KIRRLKKKFE    +  KK ED  FSK H++  ++LSKK W 
Sbjct: 177 NFVKNSLRVEASSNQIKEKIRRLKKKFETKAQRA-KKWEDPEFSKFHDRTVFELSKKVW- 234

Query: 260 GESTGGVIESAAKSNGKPKKNQNQKGNSKSLAAL-KAELTDGAEGDKMEVDNDKGNAVNK 318
           GE   G++E    +NGK K  +  K ++ S   + K+E T   E  ++E   + GN    
Sbjct: 235 GEGANGLVEKPKPNNGKRKTAKTPKKDATSRNVVAKSETTTLLESMELE---ECGN---- 287

Query: 319 TVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAELEERWKELQVAQLELFLQRN 378
            VNL      L+ +  G   L E  +  GL +I  +K+ ELE +W++L++A++EL   R+
Sbjct: 288 -VNL------LYREVSGFKELNEDEMKRGLALIGESKRKELEGKWRKLRLAEMELVANRS 340

Query: 379 ELIKEQAKLILEAMK 393
            LI EQ KLI EA++
Sbjct: 341 LLIGEQIKLIFEALQ 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	393
TAIR|locus:2122659	368	AT4G25210 [Arabidopsis thalian	0.814	0.869	0.279	7.3e-27
TAIR|locus:2195748	376	AT1G61730 [Arabidopsis thalian	0.923	0.965	0.240	9.7e-25
TAIR|locus:2200106	352	AT1G11510 [Arabidopsis thalian	0.394	0.440	0.335	6.8e-22
TAIR|locus:2038821	252	AT2G01370 [Arabidopsis thalian	0.391	0.611	0.327	1.2e-21
TAIR|locus:2125068	325	AT4G01260 [Arabidopsis thalian	0.526	0.636	0.271	2.4e-21
TAIR|locus:2126091	364	AT4G00390 [Arabidopsis thalian	0.513	0.554	0.285	1.9e-19
TAIR|locus:2114815	456	AT3G04930 [Arabidopsis thalian	0.284	0.245	0.350	1.9e-18
TAIR|locus:2143764	427	AT5G28040 [Arabidopsis thalian	0.284	0.262	0.350	1.6e-16
TAIR|locus:2127098	328	AT4G00610 [Arabidopsis thalian	0.279	0.335	0.333	2.7e-15
TAIR|locus:2194874	296	AT1G44810 [Arabidopsis thalian	0.386	0.513	0.273	2.7e-15

TAIR|locus:2122659 AT4G25210 [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 97/347 (27%), Positives = 156/347 (44%)

Query:    61 QSAVKKPEATPATPQTKXXXXXXXXXXXXXXXXPDATP------KPIATKPMEETP--KV 112
             +S+ + P+   ++ + +                P++ P      KP+ TKP+ ET     
Sbjct:    30 ESSAEVPKKVESSQKPESDSEGESESESSSGPEPESEPAKTIKLKPVGTKPIPETSGSAA 89

Query:   113 TKPRSKPLSSKRP-NETEEXXXXXXXXXXXXPEADP--DEEEQKKPGEDTKKQLFQRLWS 169
             T P S   ++KRP  E                   P  ++E +K   ED KK +FQRL+S
Sbjct:    90 TVPESS--TAKRPLKEAAPEAIKKQKTSDTEHVKKPITNDEVKKISSEDAKK-MFQRLFS 146

Query:   170 EDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRXXXXXXXX 229
             E DEI +L+G+ D+++ KG DP +D+  F  Y+K  +  D +K Q+V K++R        
Sbjct:   147 ETDEIALLQGIIDFTSTKG-DPYEDIDAFCIYVKKLIDFDATKNQIVTKLQRLKKKFNNA 205

Query:   230 XXXXXX---XXXDRTFSKPHEQKAYDLSKKFWGGESTGGVIESAAXXXXXXXXXXXXXXX 286
                         D  F+K  EQK ++LS+K WG   + GV+ +                 
Sbjct:   206 VKNSLKKGKTEDDIEFAKDLEQKGFELSRKIWG---SNGVLVTGKSSRKKVGGTPAPKEM 262

Query:   287 XXXLAALKAELTDGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVA-GLEEFVLH 345
                L A         E  K E    +   VN  +++  +     +   G + GL+E  L 
Sbjct:   263 K--LVAHSTPKKQQEEAKKPE--RTEAKVVNTGLSIGKEIASFLNADNGSSCGLDESTLT 318

Query:   346 D-GLDMIEGAKKAELEERWKELQVAQLELFLQRNELIKEQAKLILEA 391
                  + +GA+K E+EE+WK+L+  Q EL LQR+ L+ E AK+I +A
Sbjct:   319 AVWAKVADGAEKREVEEKWKKLKAKQFELCLQRSGLVNETAKMIFKA 365

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0016592 "mediator complex" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2195748 AT1G61730 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 95/395 (24%), Positives = 153/395 (38%)

Query:     4 KKPNPMEEPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQEPAKTQSPPPQKSHKQSA 63
             KK NP+E+PP A                               P K +   P  +   + 
Sbjct:     3 KKLNPLEDPPTATSSDEDDVETSEAGEASDDSSSSEEDV----PIKIRIKSPSATTAAAP 58

Query:    64 VKKPEATPATPQTKXXXXXXXXXXXXXXXXPDA-TPKPIATKPMEETPKVTKPRSKPLSS 122
               K  A      +                 P++ + K IA   +    K   P S   + 
Sbjct:    59 PAKSTAVSTAADSDSGSETETDSDSESTNPPNSGSGKTIALNTVN-LKKKEDPTSSSATL 117

Query:   123 KRP--NETEEXXXXXXXXXXXXPEADPDEEEQKKPGEDTKKQLFQRLWSEDDEIVVLKGM 180
               P      +                 DEE  KKPG       FQRLWSE+DEI+VL+GM
Sbjct:   118 ALPAMKSGTKRPASEAAATTSTKRVKKDEESVKKPGG------FQRLWSEEDEILVLQGM 171

Query:   181 TDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRXXXXXXXXXXXXXXXXXDR 240
              D+    G  P  D   FYD++K S+  +VSK Q +DKIR                  + 
Sbjct:   172 IDFKADTGKSPYVDTNAFYDFLKKSISFEVSKNQFMDKIR-----SLRKKYIGKEGRNEP 226

Query:   241 TFSKPHEQKAYDLSKKFWGGESTGGVIESAAXXXXXXXXXXXXXXXXXXLAALKAELT-- 298
             +F K H++KA++LSK  WG +   G+   A                   + ++K EL   
Sbjct:   227 SFVKAHDKKAFELSKFIWGPK---GI---ALDSNVKSNGVSKKSVAKKKIDSVKQELVFA 280

Query:   299 DGAEGDKMEVDNDKGNAVNKTVNLKDKDKVLFDKSLGVAGLEEFVLHDGLDMIEGAKKAE 358
              G+  +  +V+ D G+      +  D   ++  + +   G++E+ +     ++    K  
Sbjct:   281 GGSSTNGKKVEEDGGD---DGCDWFDNSSLV--RMIASLGVDEYYVKQQWSLVSVESKKI 335

Query:   359 LEERWKELQVAQLELFLQRNELIKEQAKLILEAMK 393
             +EE++K LQ  +LE  L++ + + E A + +EA K
Sbjct:   336 VEEKYKLLQAKELEFVLEKTKFLNEVASMFVEASK 370

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2200106 AT1G11510 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
 Identities = 54/161 (33%), Positives = 82/161 (50%)

Query:   101 IATKPME-ETPKVTKPRSKPLSSKRPNETEEXXXXXXXXXXXXPEADPDEEEQKKPGEDT 159
             + T P++ +  K  K   K   +KR  E +E               + ++++    GE+T
Sbjct:    75 VVTNPVDVKRAKKVKTSEKS-GAKRSLEVDEAAVSMDVKRAKKVSGEEEKKKSGGGGEET 133

Query:   160 KKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKI 219
             KK  FQRLW+EDDEIVVL+G+ D     G+     +   Y+ +K S+  DVSK QL++K+
Sbjct:   134 KKTYFQRLWTEDDEIVVLQGLIDDKKDTGVSNTNKV---YELVKKSISFDVSKNQLMEKL 190

Query:   220 RRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFWGG 260
             R                  + TF KPH++KA++LSK  WGG
Sbjct:   191 R-ALKKKYENNLGKAKDGVEPTFVKPHDRKAFELSKLVWGG 230

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2038821 AT2G01370 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 53/162 (32%), Positives = 71/162 (43%)

Query:    97 TPKPIATKPMEETPKVTKPRSKPLSSKRPNETEEXXXXXXXXXXXXPEADPDEEEQKKPG 156
             T K    K   ET K  KP   P   KR  +++               +D DE       
Sbjct:    18 TAKKNRRKIHRETNKRLKPEEDPSMVKRRQDSDSDSLEKEVSVVVTKTSD-DE----MVS 72

Query:   157 EDTKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLV 216
              DTKK  FQR+WS+DDEIV+L+GM D+   KG  P  DM GF D +KN +    ++ Q  
Sbjct:    73 TDTKKNYFQRIWSDDDEIVLLQGMVDFENDKGKSPYDDMTGFIDTVKNFISFQANQHQFT 132

Query:   217 DKIRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFW 258
              KIRR                 + +    H++K + LSK  W
Sbjct:   133 TKIRRLKDKFLKKWNNGVD---ENSLVNAHDRKCFQLSKVIW 171

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2125068 AT4G01260 [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
 Identities = 60/221 (27%), Positives = 95/221 (42%)

Query:    52 SPPPQKSHKQSAVKKPEATPATPQTKXXXXXXXXXXXXXXXXPDATPKPIATKPMEETPK 111
             +P   K  +   V   E   +    +                 +++ KP+       +  
Sbjct:     2 APKQLKKIENPVVSSSEEEESASSGESATSGEESDSSADSPVKESSKKPVVVSKPSGSKT 61

Query:   112 VTKPRSKPLSSKRPNETEEXXXXXXXXXXXXPEADPDEEEQKKPGEDTKKQLFQRLWSED 171
              TKP S   + +   +T+E                  EE+ KK  E  KK LF RL++E+
Sbjct:    62 TTKPESSTAAKRSFEKTDEMSKKKSKNSMG-------EEDVKKKDETLKKNLFVRLFTEE 114

Query:   172 DEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKI---RRXXXXXXX 228
             DE ++L+G  D++TKK  +P+  +  FY+ IKNS+  DV+K QLV KI   ++       
Sbjct:   115 DEAILLQGFLDFATKKE-NPSDHIDDFYESIKNSISFDVTKPQLVTKIGNLKKKFNGRVS 173

Query:   229 XXXXXXXXXXDRTFSKPHEQKAYDLSKKFWGGESTGGVIES 269
                          FSK  +Q  +DLS+K WG   + GV+ S
Sbjct:   174 KGLKKGKNEEVMVFSKASDQNCFDLSRKIWG---SNGVLYS 211

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2126091 AT4G00390 [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
 Identities = 63/221 (28%), Positives = 89/221 (40%)

Query:    47 PAKTQSPPPQKSHKQSAVKKPEATPATPQTKXXXXXXXXXXXXXXXXPDATPKPIATKPM 106
             PA T + P     K +AV    ATPA   +                  D+  +       
Sbjct:    38 PATTAAAPA----KSTAVSA--ATPAKSTSVSAAAPSKSTAVSAAADSDSGSESETDSDS 91

Query:   107 EETPKVTKPRSKPLSSKRPNETEEXXXXXX-------XXXXXXPEADPDEEEQKKPGEDT 159
             E T        K ++SK+ ++                        A    +  KK  E  
Sbjct:    92 ESTDPPKSGSGKTIASKKKDDPSSSTATLALPAVKSGAKRAASEAATTSTKRVKKDEESV 151

Query:   160 KKQ-LFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDK 218
             KK  LFQRLWS+DDEI +L+GM DY    G  P+ D   FY++ K S+  +VSK+Q  DK
Sbjct:   152 KKPALFQRLWSDDDEISMLQGMIDYHADTGKSPSADTNAFYEFQKKSISFEVSKSQFSDK 211

Query:   219 IRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFWG 259
             +R                  +  F K H++KA++LSK  WG
Sbjct:   212 VR-----SLRKKYRAKEGKDEPRFVKAHDKKAFELSKFIWG 247

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

TAIR|locus:2114815 AT3G04930 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
 Identities = 41/117 (35%), Positives = 65/117 (55%)

Query:   153 KKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTK-KGLDPNQ-DMQGFYDYIKNSLHVDV 210
             ++P  D  ++LFQRLW+++DEI +L+G  DY T  +G   +  D   FY+ IK+ L +D 
Sbjct:   127 QRPPIDDSRRLFQRLWTDEDEIELLRGFLDYMTMHRGSSSHPPDTAPFYEQIKSKLQLDF 186

Query:   211 SKAQLVDKIRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFWGGESTGGVI 267
             +K QLV+K+RR                 +  F  PH+Q  +++S+K W    TG +I
Sbjct:   187 NKNQLVEKLRRLKKKYRNVMSKISSGK-EVFFKSPHDQSTFEISRKIWN--QTGKII 240

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2143764 AT5G28040 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 41/117 (35%), Positives = 65/117 (55%)

Query:   153 KKPGEDTKKQLFQRLWSEDDEIVVLKGMTDYSTK-KGLDPNQ-DMQGFYDYIKNSLHVDV 210
             ++P  D  ++LFQRLW+++DEI +L+G  DY T  +G   +  D   FY+ IK+ L ++ 
Sbjct:   114 QRPPIDDSRRLFQRLWTDEDEIELLRGFLDYITNHRGNSSHPPDTAPFYEQIKSKLQLEF 173

Query:   211 SKAQLVDKIRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFWGGESTGGVI 267
             +K QLV+K+RR                 +  F  PH+Q  +D+S+K W    TG +I
Sbjct:   174 NKNQLVEKLRRLKKKYRNVMSKFSSGK-EVFFKSPHDQATFDISRKIWN--QTGKII 227

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2127098 AT4G00610 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
 Identities = 41/123 (33%), Positives = 68/123 (55%)

Query:   144 EADPDEEEQKKPGEDTKKQL-FQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYI 202
             E  P+EE  K   E  KK L FQRLW+++DEIV L+GM  ++   G + ++DM GF++ +
Sbjct:   128 EGKPEEERAKTETETGKKPLLFQRLWTDEDEIVFLQGMIKFAKDTGKNVSEDMNGFFEKL 187

Query:   203 KNSLHVDVSKAQLVDKIRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFW--GG 260
             K+S+  +V   Q V+KIR                  ++  +  H++K Y+L++  W   G
Sbjct:   188 KDSISFEVKTDQFVNKIR----------SMKRKYIENKKTTTEHDKKCYELAEIIWVSDG 237

Query:   261 EST 263
             ++T
Sbjct:   238 DAT 240

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2194874 AT1G44810 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
 Identities = 44/161 (27%), Positives = 67/161 (41%)

Query:   100 PIATKPMEETPKVTKPRS-KPLSSKRPNETEEXXXXXXXXXXXXPEADPDEEEQKKPGED 158
             P    P  ++   T   S KP+      + E               +   +  +K  G+D
Sbjct:    58 PSTEAPTLDSGSETNSDSDKPIVLTSQKKKEGTDSSGTKRASEGTSSKDIKRAKKVSGDD 117

Query:   159 TKKQLFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDK 218
               K+ FQ LW+++DEI +L+GM D+  + G   + DM GF+D  K  +  DVSK Q  DK
Sbjct:   118 DNKK-FQSLWTKEDEISLLQGMIDFKAETGTSAHDDMNGFFDIAKRYISFDVSKIQFGDK 176

Query:   219 IRRXXXXXXXXXXXXXXXXXDRTFSKPHEQKAYDLSKKFWG 259
             IR                   +     H++K   L+K  WG
Sbjct:   177 IR-------GLKKKYFGVRKKKGLDLDHDKKCLGLAKSIWG 210

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	393
pfam04504	98	pfam04504, DUF573, Protein of unknown function, DU	1e-40
PTZ00449	943	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry anti	3e-06
PRK13108	460	PRK13108, PRK13108, prolipoprotein diacylglyceryl	6e-05
PHA03307	1352	PHA03307, PHA03307, transcriptional regulator ICP4	7e-05
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	2e-04
PTZ00108	1388	PTZ00108, PTZ00108, DNA topoisomerase 2-like prote	3e-04
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	6e-04
PRK13108	460	PRK13108, PRK13108, prolipoprotein diacylglyceryl	0.001

>gnl|CDD|218117 pfam04504, DUF573, Protein of unknown function, DUF573

 Score =  138 bits (351), Expect = 1e-40
 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 1/97 (1%)

Query: 163 LFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRL 222
           LFQRLWSE+DEIV+L+GM D+  K G  P+ D   FY+++K S+  DVSK+QL DKIRRL
Sbjct: 2   LFQRLWSEEDEIVLLQGMIDFKAKTGKSPSDDTDAFYEFVKGSISFDVSKSQLSDKIRRL 61

Query: 223 KKKFENNLGKGKKKGEDRTFSKPHEQKAYDLSKKFWG 259
           KKKF     K  K G+D +F+KPH+QK ++LSKK WG
Sbjct: 62  KKKFRGKRKKI-KTGDDPSFTKPHDQKCFELSKKIWG 97

Length = 98

>gnl|CDD|185628 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 16/165 (9%)

Query: 3   PKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQS 62
           P+ P     PP A   +E EE +     E     +G    + +E    + P P K HK S
Sbjct: 511 PEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKEHKPS 570

Query: 63  AV----KKPEA-----------TPATPQTKSLSSGESESESESESEPDATPKPIATKPME 107
            +    KKPE             P  P+    +   +  +S    E    PK        
Sbjct: 571 KIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESP 630

Query: 108 ETPKVTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQ 152
           ++PK   P  +P S +RP E  +  K  K  K   P  DP  +E+
Sbjct: 631 KSPKRPPPPQRPSSPERP-EGPKIIKSPKPPKSPKPPFDPKFKEK 674

Length = 943

>gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed

 Score = 44.6 bits (105), Expect = 6e-05
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 9/156 (5%)

Query: 6   PNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVK 65
           P   E P A   SE V ++       E++++       A  P     P       ++   
Sbjct: 276 PKGREAPGALRGSEYVVDEALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKA 335

Query: 66  KPEATPATPQTKSLSS-----GESESESESESEPDAT-PKPIAT---KPMEETPKVTKPR 116
           +          +S+       GES    E  SE D    +P       P           
Sbjct: 336 EVAEVTDEVAAESVVQVADRDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAAS 395

Query: 117 SKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQ 152
           + P              + +  +K +P  DP + ++
Sbjct: 396 AAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDE 431

Length = 460

>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional

 Score = 44.8 bits (106), Expect = 7e-05
 Identities = 26/156 (16%), Positives = 45/156 (28%), Gaps = 13/156 (8%)

Query: 6   PNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVK 65
           P+  + PP                SE +      G   A  P    + P           
Sbjct: 111 PSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAA--------- 161

Query: 66  KPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRP 125
              +  A+ +  +L     E  + + S P A P P    P          RS P+S+   
Sbjct: 162 -VASDAASSRQAALPLSSPEETARAPSSPPAEPPPS--TPPAAASPRPPRRSSPISASAS 218

Query: 126 NETEESAKDSK-RAKKKSPEADPDEEEQKKPGEDTK 160
           +      + +   A   S ++   E      G + +
Sbjct: 219 SPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENE 254

Length = 1352

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 11  EPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVKKPEAT 70
              +  +S+   ++D  + S +   +D      +     + S     S K +   +  + 
Sbjct: 146 TNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQ 205

Query: 71  PATPQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETEE 130
           PA+  T +  S   +++S S+S  D+     +           K +    S  + ++TE 
Sbjct: 206 PASDDTANQKSSSKDNQSMSDSALDSILDQYSE-------DAKKTQKDYASQSKKDKTET 258

Query: 131 SA 132
           S 
Sbjct: 259 SN 260

Length = 619

>gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 11/182 (6%)

Query: 4    KKPNPMEEPPAASSSEEVEEDD-DSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQS 62
            KK + +       S E+ + DD   +     S SD + +E+ +   K  S    KS K +
Sbjct: 1190 KKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNN 1249

Query: 63   AVKKPEATPATPQTKSLSSGESESESESESEPDATPKPI----------ATKPMEETPKV 112
            + K  E             G+ ++  +  S    +P P            +KP   T K 
Sbjct: 1250 SSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKK 1309

Query: 113  TKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQRLWSEDD 172
             K R +   +    + +   K +++ K K+        +  +     +K+       +DD
Sbjct: 1310 VKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDD 1369

Query: 173  EI 174
            + 
Sbjct: 1370 DS 1371

Length = 1388

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 41.8 bits (98), Expect = 6e-04
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 12  PPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVKKPEATP 71
           P AA+++     +   +     +++D  G++ A   A   +    ++   S   + +A P
Sbjct: 412 PKAAAAAAATRAEAPPAAPAPPATAD-RGDDAADGDAPVPAKANARASADSRCDERDAQP 470

Query: 72  AT-PQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRSKPLSSKRPNETEE 130
                + S  + ++  ++  E  P A        P   TP        P ++ R +    
Sbjct: 471 PADSGSASAPASDAPPDAAFEPAPRAAA------PSAATPAAVPDARAPAAASREDAPAA 524

Query: 131 SAKDSKRAKKKSPEAD 146
           +A  +  A+  +P A 
Sbjct: 525 AAPPAPEARPPTPAAA 540

Length = 830

>gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 5/141 (3%)

Query: 3   PKKPNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGE-----EDAQEPAKTQSPPPQK 57
           P +PN  ++   A  +E  E  D+ +    V  +D DGE     E+  E    +  P   
Sbjct: 320 PGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADIEREQPGDL 379

Query: 58  SHKQSAVKKPEATPATPQTKSLSSGESESESESESEPDATPKPIATKPMEETPKVTKPRS 117
           + +  A  + +A  A+   +  ++  SE+  E+E E      PI      +   V  P  
Sbjct: 380 AGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGD 439

Query: 118 KPLSSKRPNETEESAKDSKRA 138
            P         ++ +   +R 
Sbjct: 440 DPAEPDGIRRQDDFSSRRRRW 460

Length = 460

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	393
PF04504	98	DUF573: Protein of unknown function, DUF573; Inter	100.0
PF12776	96	Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain;	96.35
PF13837	90	Myb_DNA-bind_4: Myb/SANT-like DNA-binding domain;	92.48
PF07904	91	Eaf7: Chromatin modification-related protein EAF7;	88.24

>PF04504 DUF573: Protein of unknown function, DUF573; InterPro: IPR007592 This is a family of uncharacterised proteins

Probab=100.00  E-value=8.5e-37  Score=255.94  Aligned_cols=97  Identities=59%  Similarity=1.067  Sum_probs=94.8

Q ss_pred             ccccCCCchhHHHHHHHHHHHHHhhCCCCccchHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHhhhcccccCCCCCCC
Q 036050          163 LFQRLWSEDDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTF  242 (393)
Q Consensus       163 ~fqR~WS~eDEI~IL~gli~~~~~~G~~P~~D~~af~d~ik~sl~~~~s~~QL~~KiRrLKkKY~~~~~K~~k~G~~p~f  242 (393)
                      +|||+||++|||+||+|||+|+++||..|..||++||++|+++|+++||++||++||||||+||.+++.|+ ++|.+|.|
T Consensus         2 ~~qR~WS~eDEi~iL~gl~~~~~~~G~~p~~d~~~f~~~vk~~l~~~~s~~Ql~~KirrLK~Ky~~~~~k~-~~g~~~~~   80 (98)
T PF04504_consen    2 LFQRLWSEEDEIVILQGLIDFRAKTGKSPQPDMNAFYDFVKGSLSFDVSKNQLYDKIRRLKKKYRNAVKKS-KNGKDPSF   80 (98)
T ss_pred             CCcCCCCchHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHhhhc-ccCcCCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999887 89999999


Q ss_pred             CChhHHHHHHHHhhhcCC
Q 036050          243 SKPHEQKAYDLSKKFWGG  260 (393)
Q Consensus       243 ~~~HD~~~feLSk~IWG~  260 (393)
                      ++|||++||+||++|||+
T Consensus        81 ~~~hd~~~f~Lsk~IWG~   98 (98)
T PF04504_consen   81 SKPHDRRLFELSKKIWGS   98 (98)
T ss_pred             CCHhHHHHHHHHHHHcCC
Confidence            999999999999999995

>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains

Probab=96.35  E-value=0.0047  Score=50.31  Aligned_cols=63  Identities=19%  Similarity=0.282  Sum_probs=51.5

Q ss_pred             CCCchhHHHHHHHHHHHHHhhCCCC-c-----cchHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHhhh
Q 036050          167 LWSEDDEIVVLKGMTDYSTKKGLDP-N-----QDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNL  230 (393)
Q Consensus       167 ~WS~eDEI~IL~gli~~~~~~G~~P-~-----~D~~af~d~ik~sl~~~~s~~QL~~KiRrLKkKY~~~~  230 (393)
                      -||++.+-.||..|++.....+. | .     ..+......+.......++..||..|++.||++|....
T Consensus         1 ~Wt~~~~~~ll~~~~e~~~~g~~-~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~~y~~~~   69 (96)
T PF12776_consen    1 SWTPEMTRFLLDLLIEQINKGNR-PTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKKDYRIWK   69 (96)
T ss_pred             CCChHHHHHHHHHHHHHHHhCCC-CCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHH
Confidence            39999999999999999776554 4 2     24566666666777788999999999999999999875

>PF13837 Myb_DNA-bind_4: Myb/SANT-like DNA-binding domain; PDB: 2EBI_A 2JMW_A

Probab=92.48  E-value=0.29  Score=39.20  Aligned_cols=66  Identities=15%  Similarity=0.301  Sum_probs=39.2

Q ss_pred             cCCCchhHHHHHHHHHH--HHHh--h-CCCCcc-chHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHhhhcc
Q 036050          166 RLWSEDDEIVVLKGMTD--YSTK--K-GLDPNQ-DMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGK  232 (393)
Q Consensus       166 R~WS~eDEI~IL~gli~--~~~~--~-G~~P~~-D~~af~d~ik~sl~~~~s~~QL~~KiRrLKkKY~~~~~K  232 (393)
                      +.|+.+.-..||+.+..  +...  . +..... -+....+.+. ...+..|..|+..|+..|+++|......
T Consensus         2 ~~Wt~~et~~Li~~~~~~~~~~~~~~~~~~~~~~~w~~Ia~~l~-~~G~~rt~~qc~~Kw~~L~~~Yk~~k~~   73 (90)
T PF13837_consen    2 RNWTDEETKLLIELWKENLMELRFDNGGKKRNKKVWKEIAEELA-EHGYNRTPEQCRNKWKNLKKKYKKIKDR   73 (90)
T ss_dssp             -SS-HHHHHHHHHHHHH--HHHHHHH--SS--HHHHHHHHHHHH-HHC----HHHHHHHHHHHHHHHHCSSSS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHH-HcCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            47999988889888888  3331  2 222222 2333333333 2356779999999999999999988644

>PF07904 Eaf7: Chromatin modification-related protein EAF7; InterPro: IPR012423 The Saccharomyces cerevisiae (Baker's yeast) member of this family P53911 from SWISSPROT is part of NuA4, the only essential histone acetyltransferase complex in S

Probab=88.24  E-value=0.69  Score=38.65  Aligned_cols=51  Identities=24%  Similarity=0.434  Sum_probs=42.5

Q ss_pred             hhHHHHHHHHHHHHHhhCCCCccchHHHHHHHHhh-----cccCCCHHHHHHHHHHH
Q 036050          171 DDEIVVLKGMTDYSTKKGLDPNQDMQGFYDYIKNS-----LHVDVSKAQLVDKIRRL  222 (393)
Q Consensus       171 eDEI~IL~gli~~~~~~G~~P~~D~~af~d~ik~s-----l~~~~s~~QL~~KiRrL  222 (393)
                      ++||+||++|+.|+= -|..=+-.|.+..+.|++.     +...++..+|-.||++|
T Consensus         1 e~Ei~Lf~a~~~~KP-vGi~KHF~M~~I~~~l~~~~~~~~~~~~~t~~~IW~kL~~~   56 (91)
T PF07904_consen    1 EDEIRLFRAMCRYKP-VGIHKHFHMICIVERLNNPGFDPKLNKHFTIDDIWKKLRTL   56 (91)
T ss_pred             ChHHHHHHHHHhcCC-CccchHHHHHHHHHHHhccccCCccCCcCCHHHHHHHHHHh
Confidence            589999999999943 3543334789999999999     89999999999998876

cerevisiae involved in global histone acetylation []. ; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus, 0043189 H4/H2A histone acetyltransferase complex

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	393
2xag_A	852	Lysine-specific histone demethylase 1; amine oxida	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852

 Score = 48.4 bits (114), Expect = 3e-06
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 2/154 (1%)

Query: 6   PNPMEEPPAASSSEEVEEDDDSSGSEEVSSSDGDGEEDAQEPAKTQSPPPQKSHKQSAVK 65
             P     + + SE   +    SG  EV      GE   ++    ++ PP    +     
Sbjct: 23  AGPGTAGGSENGSEVAAQPAGLSGPAEVGP-GAVGERTPRKKEPPRASPPGGLAEPPGSA 81

Query: 66  KPEATPATPQTKSLSSGESESESESESEPDATPKP-IATKPMEETPKVTKPRSKPLSSKR 124
            P+A P      +       +E+          +  +  + M+E+             +R
Sbjct: 82  GPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEER 141

Query: 125 PNETEESAKDSKRAKKKSPEADPDEEEQKKPGED 158
             + E+  K      +  PE + + E ++  G +
Sbjct: 142 NAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVE 175

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 48/375 (12%), Positives = 111/375 (29%), Gaps = 117/375 (31%)

Query: 112 VTKPRSKPLSSKRPNETEESAKDSKRAKKKSPEADPDEEEQKKPGEDTKKQLFQRLWSED 171
           ++  +++              +D  R    +         + +P    ++ L   L    
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRD--RLYNDNQVFAKYNVSRLQPYLKLRQAL-LEL--RP 149

Query: 172 DEIVVLKGMT-------------DYSTKKGLD-------------PNQDMQGFYDYIKNS 205
            + V++ G+               Y  +  +D             P   ++     +   
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE-----MLQK 204

Query: 206 L--HVDVSKAQLVDKIRRLKKKFENNLGKGKKKGEDRTF--SKPHEQ------------- 248
           L   +D +     D    +K +  +       + E R    SKP+E              
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHS------IQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 249 -KAYDLS---------------------KKFWGGESTGGVIESAAKS------NGKPKK- 279
             A++LS                             +  +     KS      + +P+  
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 280 -NQNQKGNSKSLAALKAELTDGAEGDKME----VDNDK-GNAVNKTVN-LKDKD-KVLFD 331
             +    N + L+ +   + DG      +    V+ DK    +  ++N L+  + + +F 
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGL--ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF- 375

Query: 332 KSLGV----AGLEEFVL---------HDGLDMIEG-AKKAELEERWKELQVA----QLEL 373
             L V    A +   +L          D + ++    K + +E++ KE  ++     LEL
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 374 FLQRNELIKEQAKLI 388
            ++          ++
Sbjct: 436 KVKLENEYALHRSIV 450

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00