Citrus Sinensis ID: 036271

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFTQ
cccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEcccccEEEEccHHHHHHHHHHcccccccccccccccHHccccccEEEccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccccccccccccccEEEcc
cHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcHHHcccccHHHHHHHHHHcccEEEEEcccccEEEEccHHHHHHHHHHccHHHcccccHHHHHHHEEccccEEEccccHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccHHcHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccEcccccEEEEEc
MEAAYSWVVIALTLLAALAFLSTFRRRAlkfpagpkpwpiignlnligplphqslHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDhifasrpqtaagkhttynylnltwapygpywrqGRKLYLSELfsskrlesyQYIRVEEYRAFISRLYAlsgkpvvlkEHLSRVTLSIISRTVLgkkyfseskaedsIVTLEEFQEMLDELFLLNGvlnigdwipwldflDLQGYVKRMKALKKKFDRFhdhvfdehkanrkgnlkdfvpKDMVDLLLQmaddpnldvklnydsvrgftq
MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASrpqtaagkhTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHlsrvtlsiisrtvlgkkyfsesKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHvfdehkanrkgnlkdfVPKDMVDLLLQMaddpnldvklnYDSVRGFTQ
MEAAYSWVVIaltllaalaflstfrrralKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFTQ
***AYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNY********
MEAAYSWVVIALTLLAALAFL***************PWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYA**G*PVVLKEHLSRVTLSIISRTVLGKKYFSES******VTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVF******************MVDLLLQMADD****VKLNYDSVRGFTQ
MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFTQ
MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSE*KAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRK******VPKDMVDLLLQMADDPNLDVKLNYDSVRGFTQ
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFTQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query301 2.2.26 [Sep-21-2011]
Q9SD85 513 Flavonoid 3'-monooxygenas yes no 0.853 0.500 0.399 2e-51
Q50EK4 525 Cytochrome P450 750A1 OS= N/A no 0.903 0.518 0.391 3e-47
Q42798 509 Cytochrome P450 93A1 OS=G no no 0.956 0.565 0.349 5e-47
P48418 506 Flavonoid 3',5'-hydroxyla N/A no 0.887 0.527 0.379 1e-46
P37118 505 Cytochrome P450 71A2 OS=S N/A no 0.903 0.538 0.352 2e-46
Q9SBQ9 512 Flavonoid 3'-monooxygenas N/A no 0.764 0.449 0.428 2e-45
P37117 507 Cytochrome P450 71A4 OS=S N/A no 0.900 0.534 0.358 2e-45
P48419 508 Flavonoid 3',5'-hydroxyla N/A no 0.870 0.515 0.371 1e-44
O81970 499 Cytochrome P450 71A9 OS=G no no 0.877 0.529 0.370 6e-44
P37120 513 Flavonoid 3',5'-hydroxyla N/A no 0.830 0.487 0.369 7e-44
>sp|Q9SD85|F3PH_ARATH Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  202 bits (515), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/263 (39%), Positives = 152/263 (57%), Gaps = 6/263 (2%)

Query: 1   MEAAYSWVVIALTLLAALAFLSTFRRRAL--KFPAGPKPWPIIGNLNLIGPLPHQSLHKL 58
           M   +  +++A  L   L   S  R R+   + P GP PWPIIGNL  +G  PH++L  +
Sbjct: 1   MATLFLTILLATVLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTKPHRTLSAM 60

Query: 59  SQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAP 118
              YG I+ L+ G   VVVAAS  +A+QFL+ HD  FASRP  +  KH  YNY +L +AP
Sbjct: 61  VTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAP 120

Query: 119 YGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLS 178
           YG  WR  RK+    LFS+K LE ++++R EE       L  +  KPV L + ++   ++
Sbjct: 121 YGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTKPVNLGQLVNMCVVN 180

Query: 179 IISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVK 238
            + R ++G++ F      D+    +EF+ M+ E+  L GV NIGD++P LD+LDLQG   
Sbjct: 181 ALGREMIGRRLF----GADADHKADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAG 236

Query: 239 RMKALKKKFDRFHDHVFDEHKAN 261
           +MK L K+FD F   +  EH+ N
Sbjct: 237 KMKRLHKRFDAFLSSILKEHEMN 259
Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Convert naringenin to eriodictyol and dihydrokaempferol to dihydroquercetin.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 2EC: 1
>sp|Q50EK4|C75A1_PINTA Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1 Back     alignment and function description
>sp|Q42798|C93A1_SOYBN Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1 Back     alignment and function description
>sp|P48418|C75A1_PETHY Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1 Back     alignment and function description
>sp|P37118|C71A2_SOLME Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SBQ9|F3PH_PETHY Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1 Back     alignment and function description
>sp|P37117|C71A4_SOLME Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1 Back     alignment and function description
>sp|P48419|C75A3_PETHY Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1 Back     alignment and function description
>sp|O81970|C71A9_SOYBN Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1 Back     alignment and function description
>sp|P37120|C75A2_SOLME Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
225444718 509 PREDICTED: flavonoid 3'-monooxygenase [V 0.990 0.585 0.721 1e-125
147843645 509 hypothetical protein VITISV_023195 [Viti 0.990 0.585 0.721 1e-125
225444716 508 PREDICTED: flavonoid 3'-monooxygenase [V 0.893 0.529 0.785 1e-124
225444722 509 PREDICTED: flavonoid 3'-monooxygenase-li 0.890 0.526 0.762 1e-119
147843647 461 hypothetical protein VITISV_023197 [Viti 0.890 0.581 0.762 1e-119
255549934 521 flavonoid 3-hydroxylase, putative [Ricin 0.966 0.558 0.708 1e-118
359484266 471 PREDICTED: LOW QUALITY PROTEIN: flavonoi 0.873 0.558 0.750 1e-117
255550439 521 flavonoid 3-hydroxylase, putative [Ricin 0.983 0.568 0.689 1e-116
224141651 486 cytochrome P450 [Populus trichocarpa] gi 0.887 0.549 0.735 1e-114
224069144 510 cytochrome P450 [Populus trichocarpa] gi 0.986 0.582 0.694 1e-113
>gi|225444718|ref|XP_002278462.1| PREDICTED: flavonoid 3'-monooxygenase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/305 (72%), Positives = 264/305 (86%), Gaps = 7/305 (2%)

Query: 1   MEAAYSWVVIALTLLAALAFLS---TFRR-RALKFPAGPKPWPIIGNLNLIGPLPHQSLH 56
           MEA  SWVV+AL  LA++A LS   +FR       P GP PWPIIGNLNLIG LPH+SLH
Sbjct: 1   MEAP-SWVVLALAWLASVALLSKVFSFRPPHKQNLPPGPTPWPIIGNLNLIGHLPHRSLH 59

Query: 57  KLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTW 116
           KLSQKYGQIM+L+FGSFPVVVA+S+EMAKQFL+T+DH+FASRP TAAGK+ TYNY N+TW
Sbjct: 60  KLSQKYGQIMELRFGSFPVVVASSSEMAKQFLKTNDHLFASRPHTAAGKYITYNYSNITW 119

Query: 117 APYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVT 176
           APYGPYWRQGRK++L+ELFSSKRL SY+YIRVEE +AFISRLYALSGKPV+LKEHLSRVT
Sbjct: 120 APYGPYWRQGRKIFLTELFSSKRLASYEYIRVEERQAFISRLYALSGKPVMLKEHLSRVT 179

Query: 177 LSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGY 236
           L +ISR VLG+KYFSE ++  S++T+EE Q+ML ELFLLNGVLNIGDWIPW+ FLDLQGY
Sbjct: 180 LGVISRIVLGEKYFSEFESGRSMLTVEECQKMLGELFLLNGVLNIGDWIPWIAFLDLQGY 239

Query: 237 VKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSV 296
           VKRMKAL+ KFDRF+DHV ++H+A R+   +DFV KDMVD+LL++ADDP+++VKL  D +
Sbjct: 240 VKRMKALRDKFDRFYDHVLEKHRARREA--EDFVAKDMVDMLLRLADDPDVEVKLTTDGI 297

Query: 297 RGFTQ 301
           +GFTQ
Sbjct: 298 KGFTQ 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147843645|emb|CAN82000.1| hypothetical protein VITISV_023195 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225444716|ref|XP_002277926.1| PREDICTED: flavonoid 3'-monooxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|225444722|ref|XP_002277972.1| PREDICTED: flavonoid 3'-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147843647|emb|CAN82002.1| hypothetical protein VITISV_023197 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255549934|ref|XP_002516018.1| flavonoid 3-hydroxylase, putative [Ricinus communis] gi|223544923|gb|EEF46438.1| flavonoid 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359484266|ref|XP_002278532.2| PREDICTED: LOW QUALITY PROTEIN: flavonoid 3'-monooxygenase-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550439|ref|XP_002516270.1| flavonoid 3-hydroxylase, putative [Ricinus communis] gi|223544756|gb|EEF46272.1| flavonoid 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224141651|ref|XP_002324180.1| cytochrome P450 [Populus trichocarpa] gi|222865614|gb|EEF02745.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224069144|ref|XP_002326285.1| cytochrome P450 [Populus trichocarpa] gi|222833478|gb|EEE71955.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
TAIR|locus:2142878 513 TT7 "TRANSPARENT TESTA 7" [Ara 0.810 0.475 0.408 1.4e-46
TAIR|locus:2035267 510 CYP703A2 ""cytochrome P450, fa 0.823 0.486 0.350 8.7e-40
TAIR|locus:2079311 500 CYP71B36 ""cytochrome P450, fa 0.780 0.47 0.368 1.4e-39
TAIR|locus:2179959 512 CYP84A4 "CYTOCHROME P450 84A4" 0.863 0.507 0.351 2.9e-39
TAIR|locus:2079251 500 CYP71B34 ""cytochrome P450, fa 0.794 0.478 0.374 6.1e-39
TAIR|locus:2079316 500 CYP71B37 ""cytochrome P450, fa 0.784 0.472 0.369 7.8e-39
TAIR|locus:2169434 507 CYP93D1 ""cytochrome P450, fam 0.867 0.514 0.344 9.9e-39
TAIR|locus:2031900 502 CYP71B2 ""cytochrome P450, fam 0.843 0.505 0.369 1.3e-38
TAIR|locus:504955634 483 CYP71A23 ""cytochrome P450, fa 0.830 0.517 0.354 1.6e-38
TAIR|locus:2116607 524 CYP82C4 ""cytochrome P450, fam 0.880 0.505 0.359 3.4e-38
TAIR|locus:2142878 TT7 "TRANSPARENT TESTA 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 103/252 (40%), Positives = 149/252 (59%)

Query:    30 KFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQ 89
             + P GP PWPIIGNL  +G  PH++L  +   YG I+ L+ G   VVVAAS  +A+QFL+
Sbjct:    32 RLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLK 91

Query:    90 THDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVE 149
              HD  FASRP  +  KH  YNY +L +APYG  WR  RK+    LFS+K LE ++++R E
Sbjct:    92 IHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQE 151

Query:   150 EYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEML 209
             E       L  +  KPV L + ++   ++ + R ++G++ F      D+    +EF+ M+
Sbjct:   152 EVGTLTRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGA----DADHKADEFRSMV 207

Query:   210 DELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKDF 269
              E+  L GV NIGD++P LD+LDLQG   +MK L K+FD F   +  EH+ N  G  +D 
Sbjct:   208 TEMMALAGVFNIGDFVPSLDWLDLQGVAGKMKRLHKRFDAFLSSILKEHEMN--G--QDQ 263

Query:   270 VPKDMVDLLLQM 281
                DM+  L+ +
Sbjct:   264 KHTDMLSTLISL 275
GO:0005506 "iron ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0016711 "flavonoid 3'-monooxygenase activity" evidence=IDA;TAS
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009411 "response to UV" evidence=IEP;RCA
GO:0009813 "flavonoid biosynthetic process" evidence=RCA;TAS
GO:0009733 "response to auxin stimulus" evidence=IEP
GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0010224 "response to UV-B" evidence=RCA
TAIR|locus:2035267 CYP703A2 ""cytochrome P450, family 703, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079311 CYP71B36 ""cytochrome P450, family 71, subfamily B, polypeptide 36"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179959 CYP84A4 "CYTOCHROME P450 84A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079251 CYP71B34 ""cytochrome P450, family 71, subfamily B, polypeptide 34"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079316 CYP71B37 ""cytochrome P450, family 71, subfamily B, polypeptide 37"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169434 CYP93D1 ""cytochrome P450, family 93, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031900 CYP71B2 ""cytochrome P450, family 71, subfamily B, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955634 CYP71A23 ""cytochrome P450, family 71, subfamily A, polypeptide 23"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116607 CYP82C4 ""cytochrome P450, family 82, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016437001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (509 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 4e-73
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 2e-65
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 4e-63
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-58
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 7e-36
pfam00067 461 pfam00067, p450, Cytochrome P450 4e-33
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 1e-28
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 3e-24
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 2e-23
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 8e-16
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 4e-12
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 2e-11
PLN02290 516 PLN02290, PLN02290, cytokinin trans-hydroxylase 2e-06
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 8e-06
PLN02302 490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 1e-05
PLN02196 463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 7e-04
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score =  233 bits (595), Expect = 4e-73
 Identities = 102/266 (38%), Positives = 160/266 (60%), Gaps = 9/266 (3%)

Query: 25  RRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMA 84
            +     P GP+ WP++GNL  +GP PH ++  L++ YG + +L+FG   VVVAASA +A
Sbjct: 29  GKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVA 88

Query: 85  KQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQ 144
            QFL+THD  F++RP  +  +H  YNY +L +APYGP WR  RK+    LFS+K L+ ++
Sbjct: 89  AQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFR 148

Query: 145 YIRVEEYRAFISRLYALSG--KPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTL 202
           ++R EE  A + R  A      PV L + ++  T + + R ++G++ F+    E +    
Sbjct: 149 HVREEEV-ALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKA---- 203

Query: 203 EEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANR 262
            EF+EM+ EL  L GV N+GD++P L +LDLQG V +MK L ++FD   + + +EHKA  
Sbjct: 204 REFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG 263

Query: 263 KGNLKDFVPKDMVDLLLQMADDPNLD 288
           +   ++   KD++  LL +  +   D
Sbjct: 264 QTGSEE--HKDLLSTLLALKREQQAD 287

Length = 517
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 301
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN02966 502 cytochrome P450 83A1 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
PLN02655 466 ent-kaurene oxidase 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PLN02290 516 cytokinin trans-hydroxylase 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 99.97
PTZ00404 482 cytochrome P450; Provisional 99.97
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.97
PLN02500 490 cytochrome P450 90B1 99.97
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.96
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.96
PLN02774 463 brassinosteroid-6-oxidase 99.96
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.96
PLN02196 463 abscisic acid 8'-hydroxylase 99.96
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.95
PLN02302 490 ent-kaurenoic acid oxidase 99.95
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.95
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.95
PLN02936 489 epsilon-ring hydroxylase 99.92
PLN02738 633 carotene beta-ring hydroxylase 99.91
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.82
PLN02648 480 allene oxide synthase 99.8
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.79
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.75
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.6
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-46  Score=343.86  Aligned_cols=264  Identities=38%  Similarity=0.662  Sum_probs=226.2

Q ss_pred             ccCCCCCCCCCCccccccccCCCC-chHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCC-CCcc
Q 036271           27 RALKFPAGPKPWPIIGNLNLIGPL-PHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQ-TAAG  104 (301)
Q Consensus        27 ~~~~~ppgP~~~PllGnl~~~~~~-~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~-~~~~  104 (301)
                      +..++||||+++|+|||++++... +|..+.+|+++|||||++|+|+.|+|||||+++|+|+|++++..|++||. ....
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            347899999999999999999655 99999999999999999999999999999999999999999999999997 2344


Q ss_pred             cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-CCceehHHHHHHHHHHHHHHH
Q 036271          105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-GKPVVLKEHLSRVTLSIISRT  183 (301)
Q Consensus       105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-g~~vd~~~~~~~~t~~ii~~~  183 (301)
                      +.+.+++.++++++||+.||++||+++..+|+.+.++++.+...+|++++++.+.+.. +++||+.+.+..+++|||+++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence            6677677899999999999999999999999999999999999999999999999722 379999999999999999999


Q ss_pred             HhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcc-ccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036271          184 VLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIP-WLDFLDL-QGYVKRMKALKKKFDRFHDHVFDEHKAN  261 (301)
Q Consensus       184 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~~~~  261 (301)
                      +||.+++.+++++ .    .++.+++.+.+...+.+++.+++| ++++++. ++..++.+....++++++.++|++|+++
T Consensus       183 ~fG~rf~~~~~~~-~----~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  183 LFGRRFEEEDEEE-F----LELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HhCCccccCCchH-H----HHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998764333 2    568899999999988888999999 6787752 3567777777778999999999999886


Q ss_pred             hcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271          262 RKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT  300 (301)
Q Consensus       262 ~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~  300 (301)
                      .+ + ++  .+||+|+||+...+++.+. +|+++|.++|
T Consensus       258 ~~-~-~~--~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~  291 (489)
T KOG0156|consen  258 IG-D-EE--GRDFVDALLKLMKEEKAEG-LTDDHLKALI  291 (489)
T ss_pred             hc-c-CC--CCcHHHHHHHhhcccccCC-CCHHHHHHHH
Confidence            52 2 22  4899999999544333232 9999999876

>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 4e-15
3pm0_A 507 Structural Characterization Of The Complex Between 2e-14
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 4e-12
3qz1_A 496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 2e-10
3czh_A 481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 1e-08
3c6g_A 479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 1e-08
2p85_A 476 Structure Of Human Lung Cytochrome P450 2a13 With I 3e-08
2q6n_A 478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 7e-08
4h1n_A 479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 7e-08
1po5_A 476 Structure Of Mammalian Cytochrome P450 2b4 Length = 8e-08
1suo_A 476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 8e-08
3tk3_A 476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 8e-08
1z10_A 476 Crystal Structure Of Human Microsomal P450 2a6 With 1e-07
3ebs_A 476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 1e-07
2pg5_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 1e-07
2pg6_A 476 Crystal Structure Of Human Microsomal P450 2a6 L240 1e-07
2pg7_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 1e-07
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 2e-07
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 3e-07
1pq2_A 476 Crystal Structure Of Human Drug Metabolizing Cytoch 1e-06
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 4e-06
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 2e-05
3qm4_A 479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 2e-05
2f9q_A 479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 4e-05
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 2e-04
1tqn_A 486 Crystal Structure Of Human Microsomal P450 3a4 Leng 2e-04
1w0e_A 485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 2e-04
3ua1_A 487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 2e-04
3e4e_A 476 Human Cytochrome P450 2e1 In Complex With The Inhib 5e-04
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure 
Iteration: 1

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 27/276 (9%)
Query: 30  KFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQ 89
           K P GP  WP+IG++  +G  PH +L ++SQ+YG ++Q++ GS PVVV +  +  +Q L 
Sbjct: 11  KNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 70
Query: 90  THDHIFASRPQTAAGKHTTYNYLNLTWAP-YGPYWRQGRKLYLSELFS---SKRLESYQY 145
                F  RP        + N  +++++P  GP W   R+L  + L S   +    S   
Sbjct: 71  RQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTS 129
Query: 146 IRVEEY-----RAFISRLYALSGKPVVLKEHLSRV--TLSIISRTVLGKKY-FSESKAED 197
             +EE+        IS L  L   P     +   V    ++I     G++Y  +  +   
Sbjct: 130 CYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLS 189
Query: 198 SIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDE 257
            +     F E++       G  N  D+IP L +L     +   K L +KF  F   +  E
Sbjct: 190 LVNLNNNFGEVV-------GSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMVKE 241
Query: 258 H-KANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLN 292
           H K   KG++     +D+ D L++   +  LD   N
Sbjct: 242 HYKTFEKGHI-----RDITDSLIEHCQEKQLDENAN 272
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 2e-68
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 2e-63
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 2e-54
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 2e-51
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 4e-51
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 8e-50
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 6e-47
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-45
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 2e-40
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 5e-40
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-39
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-38
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 5e-35
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-34
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 7e-34
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 3e-33
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 8e-31
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 6e-28
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 3e-25
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-25
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 5e-25
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-24
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 4e-24
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 3e-22
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 4e-20
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 1e-12
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 3e-12
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 3e-05
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score =  219 bits (559), Expect = 2e-68
 Identities = 35/279 (12%), Positives = 77/279 (27%), Gaps = 30/279 (10%)

Query: 15  LAAL--AFLSTFRRRALKFPAGPKPW-PIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFG 71
           +A    + L   R R    P   K   P +G+    G    + L ++ +K+G I  ++  
Sbjct: 1   MAKKTSSVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAA 60

Query: 72  SFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYL 131
              + V   +      L     +  +       +       N+    + P   + R    
Sbjct: 61  GLYITVLLDSNCYDAVLSDVASLDQTS----YAQVLMKRIFNMILPSHNPESEKKRAEM- 115

Query: 132 SELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFS 191
              F    L           R  ++            K+ L  +  S++ +T     + +
Sbjct: 116 --HFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGA 173

Query: 192 ESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFH 251
           E+             ++ +E             +P L    +    K  K +        
Sbjct: 174 ENNNS------AALTQIYEEFR------RFDKLLPKLARTTVN---KEEKQIASAAREKL 218

Query: 252 DHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVK 290
                    +RK        +  +   ++   D  +D +
Sbjct: 219 WKWLTPSGLDRKPR-----EQSWLGSYVKQLQDEGIDAE 252
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.98
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.98
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.98
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.98
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.98
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.97
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.97
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.97
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.97
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.97
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.96
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.96
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.95
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.95
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.95
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.95
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.94
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.93
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.92
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.92
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.91
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.9
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.9
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.9
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.9
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.89
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.88
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.87
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.86
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.86
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.86
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.86
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.86
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.86
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.85
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.85
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.85
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.84
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.84
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.84
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.84
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.83
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.83
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.83
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.83
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.82
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.81
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.81
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.81
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.81
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.81
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.8
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.8
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.79
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.78
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.78
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.78
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.78
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.78
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.77
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.76
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.75
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.73
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.73
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.71
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.69
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.67
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.66
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.63
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.62
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.42
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.39
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.15
2diu_A96 KIAA0430 protein; structural genomics, RRM domain, 92.16
2krb_A81 Eukaryotic translation initiation factor 3 subunit 84.39
3lqv_A115 PRE-mRNA branch site protein P14; cysless mutant, 84.33
1iqt_A75 AUF1, heterogeneous nuclear ribonucleoprotein D0; 82.42
1s79_A103 Lupus LA protein; RRM, alpha/beta, RNA binding pro 81.25
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-35  Score=274.66  Aligned_cols=262  Identities=19%  Similarity=0.301  Sum_probs=194.9

Q ss_pred             cccCCCCCCCCCCccccccccCC--CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 036271           26 RRALKFPAGPKPWPIIGNLNLIG--PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAA  103 (301)
Q Consensus        26 ~~~~~~ppgP~~~PllGnl~~~~--~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~  103 (301)
                      ++..++||||+++|++||++++.  ..++..+.+|.++||+||++++|+.++|||+||++++|+|.+++..|++||....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            44567899999999999999883  3578899999999999999999999999999999999999999999999987544


Q ss_pred             ccceeccCcceeeCCCChhhHHHHHHHHHhhccH--HHHhhhHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHHHH
Q 036271          104 GKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSS--KRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIIS  181 (301)
Q Consensus       104 ~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~--~~l~~~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~ii~  181 (301)
                      ......++.+++++++|+.|+.+||+++ +.|+.  ..++.+.+++.++++.+++.+.+..|+++|+...+.++++|||+
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence            4433333446667778999999999995 77763  44677999999999999999976547899999999999999999


Q ss_pred             HHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036271          182 RTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKAN  261 (301)
Q Consensus       182 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~  261 (301)
                      +++||.++...+ +. .    ..+......+........+.+++|+++++|. ...++.++..+.++.++.++++++++.
T Consensus       163 ~~~fG~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~  235 (494)
T 3swz_A          163 LICFNTSYKNGD-PE-L----NVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEK  235 (494)
T ss_dssp             HHHHSCCCCTTC-TH-H----HHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHcCCcCCCCC-HH-H----HHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999886544 22 1    3333444444444444456678899988864 334556677778888999999887654


Q ss_pred             hcCCCCCCCCCCHHHHHhhcccCC--------CCcccCcccchhee
Q 036271          262 RKGNLKDFVPKDMVDLLLQMADDP--------NLDVKLNYDSVRGF  299 (301)
Q Consensus       262 ~~~~~~~~~~~d~ld~lL~~~~d~--------~~~~~lt~~~i~~~  299 (301)
                      ..  .  ..+.|+++.||+...+.        .++..+|+++|.+.
T Consensus       236 ~~--~--~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~  277 (494)
T 3swz_A          236 FR--S--DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTT  277 (494)
T ss_dssp             CC--T--TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHH
T ss_pred             hc--c--cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHH
Confidence            32  1  12779999999842211        11235888888754
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens} Back     alignment and structure
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B Back     alignment and structure
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A Back     alignment and structure
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 301
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 3e-38
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 6e-37
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 6e-34
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 2e-29
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 8e-29
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 3e-22
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 7e-15
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 6e-14
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 4e-09
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 3e-38
 Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 10/259 (3%)

Query: 32  PAGPKPWPIIGNLNLIGP---LPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFL 88
           P GP   P IGN+  +     LPH  + K SQ YG+I  L  G    VV    ++ K+ L
Sbjct: 1   PPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECL 60

Query: 89  QTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKR-LESYQYIR 147
                IFA RP        T     L  + YG  W   R+L ++         +S++   
Sbjct: 61  VHQSEIFADRPCLPLFMKMTKMG-GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKI 119

Query: 148 VEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQE 207
           +EE + F   +    G+P   K+ ++    +I +  + G+++  E      ++ L     
Sbjct: 120 LEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENV 179

Query: 208 MLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLK 267
                   +  + + +  PW+  L    + +++         F   + ++   NRK  L 
Sbjct: 180 E----LAASASVFLYNAFPWIGILPFGKH-QQLFRNAAVVYDFLSRLIEKASVNRKPQLP 234

Query: 268 DFVPKDMVDLLLQMADDPN 286
                  +D + Q  +DP+
Sbjct: 235 QHFVDAYLDEMDQGKNDPS 253
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.97
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.96
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.96
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.95
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.95
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.93
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.85
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.79
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.73
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.68
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.63
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.56
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.54
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.49
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.49
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.38
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.35
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.34
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.1
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.74
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.36
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 89.66
d1whxa_111 Probable RNA-binding protein 19, Rbm19 {Mouse (Mus 86.25
d1whwa_99 Probable RNA-binding protein 19, Rbm19 {Mouse (Mus 85.2
d1l3ka184 Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human 83.76
d1hd0a_75 Heterogeneous nuclear ribonucleoprotein d0 {Human 82.59
d1p1ta_104 Cleavage stimulation factor, 64 kda subunit {Human 82.24
d1uawa_77 Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} 80.96
d1x5ua193 Splicing factor 3B subunit 4 {Human (Homo sapiens) 80.03
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.97  E-value=7.8e-31  Score=238.26  Aligned_cols=250  Identities=16%  Similarity=0.197  Sum_probs=180.7

Q ss_pred             CCCCCCCccccccccC-CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccceecc
Q 036271           32 PAGPKPWPIIGNLNLI-GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYN  110 (301)
Q Consensus        32 ppgP~~~PllGnl~~~-~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~~~~~  110 (301)
                      .|||+++|++||++++ ...|+..+.+|.++|||||++++|+.++|+|+||++|++++.++...+..++......... |
T Consensus         3 iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~-g   81 (453)
T d2ij2a1           3 MPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA-G   81 (453)
T ss_dssp             CCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH-T
T ss_pred             CccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhc-C
Confidence            5899999999999998 4568999999999999999999999999999999999999987776665543221112111 2


Q ss_pred             Ccceee-CCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-CCceehHHHHHHHHHHHHHHHHhCcc
Q 036271          111 YLNLTW-APYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-GKPVVLKEHLSRVTLSIISRTVLGKK  188 (301)
Q Consensus       111 ~~~~~~-~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-g~~vd~~~~~~~~t~~ii~~~~fG~~  188 (301)
                       .+++. ..+|+.|+++||++. +.|+++++++|.+.+.++++++++.|.+.. ++++|+.+.+.+++++++++++||.+
T Consensus        82 -~~~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~~~~idl~~~~~~~~~~~i~~~~fG~~  159 (453)
T d2ij2a1          82 -DGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYR  159 (453)
T ss_dssp             -TSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCC
T ss_pred             -CcEEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCccchHHHHHHHhhhcchhcccccc
Confidence             23332 357999999999985 899999999999999999999999998754 78999999999999999999999998


Q ss_pred             ccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 036271          189 YFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNLKD  268 (301)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~~~  268 (301)
                      ++...... ..   ..+.+....+......  +....|++..  +....+...+..+.++.+++++|+++++..    +.
T Consensus       160 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~  227 (453)
T d2ij2a1         160 FNSFYRDQ-PH---PFITSMVRALDEAMNK--LQRANPDDPA--YDENKRQFQEDIKVMNDLVDKIIADRKASG----EQ  227 (453)
T ss_dssp             CCGGGCSS-CC---HHHHHHHHHHHHHHHT--C---CTTSGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CC
T ss_pred             cchhhhcc-ch---HHHHhhhhccchhhhh--hhhccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhcccc----cc
Confidence            86432111 10   2222222222221111  1112232221  122344566677788889999998876642    22


Q ss_pred             CCCCCHHHHHhhcccCCCCcccCcccchhee
Q 036271          269 FVPKDMVDLLLQMADDPNLDVKLNYDSVRGF  299 (301)
Q Consensus       269 ~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~  299 (301)
                        ..|+++.+++ ..+.+.+..+|+++|.+.
T Consensus       228 --~~d~l~~ll~-~~~~~~~~~ls~~ei~~~  255 (453)
T d2ij2a1         228 --SDDLLTHMLN-GKDPETGEPLDDENIRYQ  255 (453)
T ss_dssp             --CSSHHHHHHH-CCCTTTCCCCCHHHHHHH
T ss_pred             --ccchhhhhhh-hcccccCcchhhhHHHhh
Confidence              7899999998 444444557999988764
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure