Citrus Sinensis ID: 036427
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 536 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FZL3 | 535 | Probable monogalactosyldi | N/A | no | 0.979 | 0.981 | 0.743 | 0.0 | |
| P93115 | 525 | Monogalactosyldiacylglyce | N/A | no | 0.977 | 0.998 | 0.755 | 0.0 | |
| O81770 | 533 | Monogalactosyldiacylglyce | yes | no | 0.983 | 0.988 | 0.740 | 0.0 | |
| Q9SM44 | 522 | Monogalactosyldiacylglyce | N/A | no | 0.970 | 0.996 | 0.735 | 0.0 | |
| Q9FZL4 | 530 | Probable monogalactosyldi | yes | no | 0.955 | 0.966 | 0.733 | 0.0 | |
| Q69QJ7 | 535 | Probable monogalactosyldi | yes | no | 0.852 | 0.854 | 0.748 | 0.0 | |
| Q0DWQ1 | 508 | Probable monogalactosyldi | no | no | 0.746 | 0.787 | 0.618 | 1e-143 | |
| Q9SI93 | 465 | Monogalactosyldiacylglyce | no | no | 0.755 | 0.870 | 0.589 | 1e-141 | |
| Q6UTZ2 | 469 | Probable monogalactosyldi | no | no | 0.733 | 0.837 | 0.619 | 1e-139 | |
| O82730 | 468 | Monogalactosyldiacylglyce | no | no | 0.740 | 0.848 | 0.618 | 1e-139 |
| >sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/537 (74%), Positives = 463/537 (86%), Gaps = 12/537 (2%)
Query: 1 MMQNPSTVSQESAPLFDLVAQVGRFAFS---SRFFNS--SSDEYASFKSNYLYFD-SFKS 54
MMQ+ S+V+QE F V+QVG F F+ SR S + D Y++ SNYLYFD + K
Sbjct: 1 MMQHSSSVTQEPTNPFGFVSQVGSFVFNNSCSRVSKSNFTLDSYSNLLSNYLYFDCNVKK 60
Query: 55 SIGQRKRNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGIN 114
K K S S S+ + SS SR++ +FNKAI+FHCE++P+GFASVG+N
Sbjct: 61 DSLNHKNKPKASPLLSLSISNKSASSF-----SRVLFQFNKAIRFHCEKIPLGFASVGVN 115
Query: 115 SSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFG 174
E NG+R+E G V+E+EG+P NG+E++ PKKVLILMSDTGGGHRASAEAI++AF+E+FG
Sbjct: 116 CGESNGVREE-GSVVENEGIPDNGVESEPPKKVLILMSDTGGGHRASAEAIRSAFNEEFG 174
Query: 175 NEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFI 234
++YQVF+TDLW++HTPWPFNQLPRSYNFLVKHG LW+MTYY TAPR++HQ+NFAATSTFI
Sbjct: 175 DKYQVFITDLWTEHTPWPFNQLPRSYNFLVKHGSLWRMTYYATAPRLVHQTNFAATSTFI 234
Query: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKL 294
AREVAKGLMKYQPDIIISVHPLMQHVPLRILR+KGLLKKI+FTTVITDLSTCHPTWFHKL
Sbjct: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIIFTTVITDLSTCHPTWFHKL 294
Query: 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354
VTRCYCP+ +VAKRA++AGL+ Q+KVYGLPVRPSFVKPV PKVELR+ELGM+E LPAVL
Sbjct: 295 VTRCYCPSEEVAKRALRAGLKPYQLKVYGLPVRPSFVKPVPPKVELRKELGMEEHLPAVL 354
Query: 355 LMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVK 414
LMGGGEGMGPIEATARALG+ALYDE GEPIGQVLVICGRNKKL N+L S WKIPVQVK
Sbjct: 355 LMGGGEGMGPIEATARALGDALYDEIHGEPIGQVLVICGRNKKLFNRLTSVQWKIPVQVK 414
Query: 415 GFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF 474
GFV+KMEE MGACDCIITKAGPGTIAEA+IRGLPIILND+IAGQEAGNVPYV+ENGCGKF
Sbjct: 415 GFVTKMEECMGACDCIITKAGPGTIAEAVIRGLPIILNDYIAGQEAGNVPYVIENGCGKF 474
Query: 475 SKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPH 531
SKSPK+IAN+V+QWFGP+ DEL+ MSQNAL+LARPDAVF+IV D+HELVRQRNF P
Sbjct: 475 SKSPKKIANIVAQWFGPRQDELRIMSQNALRLARPDAVFKIVHDMHELVRQRNFEPQ 531
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Nicotiana tabacum (taxid: 4097) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 6 |
| >sp|P93115|MGDG_CUCSA Monogalactosyldiacylglycerol synthase, chloroplastic OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/532 (75%), Positives = 455/532 (85%), Gaps = 8/532 (1%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M+NPSTV QE+ + D ++Q+G FAFSSRF N +S+ + S+ LY + F+
Sbjct: 1 MRNPSTVVQENGSVSDFISQLGYFAFSSRFLNLNSEGCSGSSSHSLYLNGFE-------- 52
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGI 121
N + S S SS GS ++ R VNEFN IKFHC + P+GFAS+G S E NGI
Sbjct: 53 NYRCVKRPPRSGASLSLSSRGSSSLRRFVNEFNNVIKFHCHKPPLGFASLGGVSDETNGI 112
Query: 122 RDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181
RD+ GV +D LPLN IE + PK+VLILMSDTGGGHRASAEAIKAAF+E+FGN YQVF+
Sbjct: 113 RDDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFI 172
Query: 182 TDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKG 241
TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYY TAP+VIHQSNFAATSTFIAREVAKG
Sbjct: 173 TDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKG 232
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301
LMKY+PDIIISVHPLMQHVP+RILR+KGLL KIVFTTV+TDLSTCHPTWFHKLVTRCYCP
Sbjct: 233 LMKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 292
Query: 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361
+ +VAKRA+ AGLQ S++KV+GLPVRPSFVKP+RPK+ELR+ELGMDE+LPAVLLMGGGEG
Sbjct: 293 STEVAKRALTAGLQPSKLKVFGLPVRPSFVKPIRPKIELRKELGMDENLPAVLLMGGGEG 352
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
MGPIEATA+AL ALYDEN GEPIGQVLVICG NKKLA +L S DWK+PVQVKGFV+KME
Sbjct: 353 MGPIEATAKALSKALYDENHGEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVTKME 412
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEI 481
E MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQEAGNVPYVVENGCGKFSKSPKEI
Sbjct: 413 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEI 472
Query: 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
AN+V++WFGPK DEL MSQNAL+LARPDAVF+IV DLHELV+QR+FVP YS
Sbjct: 473 ANIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQRSFVPQYS 524
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Involved in the synthesis of the major structural component of photosynthetic membranes. Cucumis sativus (taxid: 3659) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O81770|MGDG1_ARATH Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=MGD1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/539 (74%), Positives = 463/539 (85%), Gaps = 12/539 (2%)
Query: 2 MQNPSTVSQESA-PLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRK 60
MQNPSTV+QESA P+FD ++ +R S+SD YA SN LYF+ F++ +
Sbjct: 1 MQNPSTVTQESAAPVFDFFPRLRGLTSRNRSPCSNSDGYALSSSNALYFNGFRTL--PSR 58
Query: 61 RNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCER-LPIGFASVGIN--SSE 117
R K A+ SF+ +S GSS + R +++FN I+FHC++ +P FASVG SS+
Sbjct: 59 RMGKTLASLSFNTKSSAGSS-----LRRFISDFNSFIRFHCDKVVPESFASVGGVGLSSD 113
Query: 118 RNGIRDE-NGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE 176
NGIR+ GGVL +EGLPLNG+E D+PKKVLILMSDTGGGHRASAEAI+AAF+++FG+E
Sbjct: 114 ENGIRENGTGGVLGEEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDE 173
Query: 177 YQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAR 236
YQVF+TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYYGT+PR++HQSNFAATSTFIAR
Sbjct: 174 YQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAR 233
Query: 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVT 296
E+A+GLMKYQPDIIISVHPLMQHVPLR+LR+KGLLKKIVFTTVITDLSTCHPTWFHKLVT
Sbjct: 234 EIAQGLMKYQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVT 293
Query: 297 RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLM 356
RCYCP+ +VAKRA KAGL+ SQIKVYGLPVRPSFVKPVRPKVELRRELGMDE+LPAVLLM
Sbjct: 294 RCYCPSTEVAKRAQKAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLM 353
Query: 357 GGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGF 416
GGGEGMGPIEATARAL +ALYD+NLGE +GQVL+ICGRNKKL +KL S DWKIPVQVKGF
Sbjct: 354 GGGEGMGPIEATARALADALYDKNLGEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGF 413
Query: 417 VSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK 476
++KMEE MGACDCIITKAGPGTIAEAMIRGLPIILN +IAGQEAGNVPYVVENGCGKFSK
Sbjct: 414 ITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSK 473
Query: 477 SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSCV 535
SPKEI+ +V+ WFGP EL+ MSQNAL+LA+P+AVF+IV D+HELVR++N +P SC
Sbjct: 474 SPKEISKIVADWFGPASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQLSCT 532
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Required for proper thylakoid membrane biogenesis. Does not discriminate between prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the prokaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9SM44|MGDG_SPIOL Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea GN=MGD A PE=1 SV=1 | Back alignment and function description |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/533 (73%), Positives = 450/533 (84%), Gaps = 13/533 (2%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M +PSTV+ E + L D V ++G F +S ++S+ Y+SF SN ++F + +
Sbjct: 1 MSHPSTVTSEPSNLLDFVPKLGNFVLNSSLHGNNSNGYSSFSSNSVHFGGLAT-----QN 55
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGI 121
K + SFS +GS N+ RI+++FN+ I+ HC+R+P+GF+S+G+NS E NG+
Sbjct: 56 RYKFVNSLSFS---KEGS-----NLKRILSDFNRVIRLHCDRIPLGFSSIGLNSGESNGV 107
Query: 122 RDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181
D GVLED +P+N +E + PK+VLILMSDTGGGHRASAEAIKAAF+E+FG++YQVFV
Sbjct: 108 SDNGHGVLEDVRVPVNAVEPESPKRVLILMSDTGGGHRASAEAIKAAFNEEFGDDYQVFV 167
Query: 182 TDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKG 241
TDLWS+HTPWPFNQLPRSYNFLVKHGPLWKM YYGT+PRVIHQSNFAATS FIAREVA+G
Sbjct: 168 TDLWSEHTPWPFNQLPRSYNFLVKHGPLWKMMYYGTSPRVIHQSNFAATSVFIAREVARG 227
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301
LMKYQPDIIISVHPLMQHVPLRILR +GLL+KIVFTTV+TDLSTCHPTWFHKLVTRCYCP
Sbjct: 228 LMKYQPDIIISVHPLMQHVPLRILRGRGLLEKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 287
Query: 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361
+ +VAKRA KAGLQ SQIKVYGLPVRPSFV+ VRPK ELR+ELGMDE LPAVLLMGGGEG
Sbjct: 288 SNEVAKRATKAGLQPSQIKVYGLPVRPSFVRSVRPKNELRKELGMDEHLPAVLLMGGGEG 347
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
MGPIEATARALGNALYD NLGEP GQ+LVICGRNKKLA KL S DWKIPVQVKGFV+K+E
Sbjct: 348 MGPIEATARALGNALYDANLGEPTGQLLVICGRNKKLAGKLSSIDWKIPVQVKGFVTKIE 407
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEI 481
E MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQEAGNVPYV+ENG GK+ KSPKEI
Sbjct: 408 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVIENGIGKYLKSPKEI 467
Query: 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSC 534
A VSQWFGPK +EL+ MSQNALK ARPDAVF+IV DL ELVRQ+ FV YSC
Sbjct: 468 AKTVSQWFGPKANELQIMSQNALKHARPDAVFKIVHDLDELVRQKIFVRQYSC 520
|
Involved in the synthesis of the major structural component of photosynthetic membranes. The 1,2-diacylglycerol substrate preference is 18:2/18:2 > 18:0/18:1 > 18:1/18:1 > 18:1/16:0 > 16:0/18:2 > 18:3/18:3 > 16:0/18:1 > 16:0/16:0 > 18:0/18:0. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9FZL4|MGDG_SOYBN Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Glycine max GN=MGD A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/541 (73%), Positives = 451/541 (83%), Gaps = 29/541 (5%)
Query: 8 VSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKRNCKVSA 67
VSQES+ L DL + V RFAF S SD + SN+L+F+ R +A
Sbjct: 5 VSQESSVLLDLASHVNRFAFDS----FRSDNNKTLLSNFLHFNG-------NTRTGAAAA 53
Query: 68 ASSFSLRSGKGSSVGSFNV--SRIVNEFNKAIKFHCERLPIGFASVGINSSERNGIR--- 122
SL G VG +V I+N+FN+A++FHCE++PIGFAS+ +
Sbjct: 54 KRGVSL----GGKVGGASVRFGNILNDFNRAVRFHCEKIPIGFASLRVGDGGDGADGNGN 109
Query: 123 --------DENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFG 174
DE GGV E+EG NG+E ++PKKVLILMSDTGGGHRASAEAIKAAF+++FG
Sbjct: 110 GEGNGVRVDECGGV-ENEGFRGNGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFG 168
Query: 175 NEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFI 234
++YQVFVTDLW+DHTPWPFNQLPRSY+FLVKHGPLWKMTYYGTAPRV+HQSNFAAT TFI
Sbjct: 169 DDYQVFVTDLWADHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQSNFAATGTFI 228
Query: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKL 294
AREVAKGLMKYQPDIIISVHPLMQHVPLRILR+KGLLKKIVFTTVITDLSTCHPTWFHKL
Sbjct: 229 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIVFTTVITDLSTCHPTWFHKL 288
Query: 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354
VTRCYCPT DVA+RA+KAGLQ SQIK++GLPVRPSFVKPV+PK ELRRELGMDEDLPAVL
Sbjct: 289 VTRCYCPTTDVAQRALKAGLQQSQIKIFGLPVRPSFVKPVQPKDELRRELGMDEDLPAVL 348
Query: 355 LMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVK 414
LMGGGEGMGPIEATARALG++LYDEN+G P+GQ+LVICGRNKKLANKL S +WK+PVQVK
Sbjct: 349 LMGGGEGMGPIEATARALGDSLYDENIGAPVGQILVICGRNKKLANKLSSINWKVPVQVK 408
Query: 415 GFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF 474
GFV+KMEE MGACDCIITKAGPGTIAEA IRGLPIILND+IAGQEAGNVPYVVENGCGKF
Sbjct: 409 GFVTKMEECMGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKF 468
Query: 475 SKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSC 534
SKSPK+IA +V++WFGPK EL+ MSQNAL+LARPDAVF+IV DLHELVRQR+++P YSC
Sbjct: 469 SKSPKDIAKIVAEWFGPKAYELQQMSQNALRLARPDAVFKIVHDLHELVRQRSYLPEYSC 528
Query: 535 V 535
Sbjct: 529 T 529
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q69QJ7|MGDG1_ORYSJ Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/474 (74%), Positives = 408/474 (86%), Gaps = 17/474 (3%)
Query: 76 GKGSSVGSFNVSRIVNEFNKAIKFHCERL-PIGFASVGINSSERNGIRDEN--------- 125
G GS+ + + R+ EF++ ++ H ++ P+GFAS+G+ G E
Sbjct: 66 GAGSTAAASRLHRMWAEFSRFVRLHGNQIAPLGFASLGLGVGGGGGGSGEGAGGGGGGGG 125
Query: 126 ---GGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182
G++E+EG+ + PKKVLILMSDTGGGHRASAEAIKAAF ++FG++YQVFVT
Sbjct: 126 GEVDGLVEEEGV----ARAEAPKKVLILMSDTGGGHRASAEAIKAAFIQEFGDDYQVFVT 181
Query: 183 DLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGL 242
DLW+DHTPWPFNQLPRSY+FLVKHGPLWKMTYYGTAPRV+HQ +FAATSTFIAREVAKGL
Sbjct: 182 DLWTDHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQPHFAATSTFIAREVAKGL 241
Query: 243 MKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPT 302
MKYQPD+IISVHPLMQHVPLRILR+KGLL KI FTTV+TDLSTCHPTWFHKLVTRCYCP+
Sbjct: 242 MKYQPDVIISVHPLMQHVPLRILRSKGLLDKIPFTTVVTDLSTCHPTWFHKLVTRCYCPS 301
Query: 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM 362
A+V+KRA+KAGLQ SQIKVYGLPVRPSFVKP+RP+ ELRRELGMDE LPAVLLMGGGEGM
Sbjct: 302 AEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMGGGEGM 361
Query: 363 GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEE 422
GPIEATARALG+ALYDE LGEP GQ+LVICGRNKKL ++L S +WK+PVQVKGFV+KMEE
Sbjct: 362 GPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFVTKMEE 421
Query: 423 AMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIA 482
MGACDCIITKAGPGTIAEAMIRGLPIILN +IAGQEAGNVPYVV+NGCGKFSKSP++IA
Sbjct: 422 CMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKSPEQIA 481
Query: 483 NMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSCVT 536
+V+ WFGP+ DELK MSQNALKLARPDAVF+IV DLHELVRQ+ FVP Y+C +
Sbjct: 482 KIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQKCFVPQYACAS 535
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Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q0DWQ1|MGDG3_ORYSJ Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD3 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/401 (61%), Positives = 320/401 (79%), Gaps = 1/401 (0%)
Query: 130 EDEG-LPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH 188
E+EG + L + ++ K VLILMSDTGGGHRASA+AIK F +FG++Y+VFV DL DH
Sbjct: 84 EEEGTVELVQLGANRAKNVLILMSDTGGGHRASAQAIKDPFRIEFGDDYRVFVKDLCKDH 143
Query: 189 TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPD 248
WP N + SY F+VKH LWK+ ++ T+PR +H AA ++F A++V GL KY+PD
Sbjct: 144 AGWPLNNMESSYKFMVKHVQLWKVAFHTTSPRWVHCFYLAALASFYAKKVEAGLKKYKPD 203
Query: 249 IIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKR 308
IIISVHPLMQH+PL +L+ +GL ++VF TVITDL+TCHPTWFH V RCYCP+ +VAKR
Sbjct: 204 IIISVHPLMQHIPLWVLKWQGLQNRVVFVTVITDLNTCHPTWFHADVNRCYCPSEEVAKR 263
Query: 309 AMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368
A LQ SQI+V+GLP+RPSF + V K +LR+EL +D +LPAVLLMGGGEGMGP++ T
Sbjct: 264 AALDDLQPSQIRVFGLPIRPSFCRAVLVKDDLRKELELDPELPAVLLMGGGEGMGPVKKT 323
Query: 369 ARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACD 428
A+ALG +L+D+ LG+PIGQ++VICGRNK L++ L + +WKIP++V+GF ++ME+ MGACD
Sbjct: 324 AKALGESLFDKELGKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGFETQMEKWMGACD 383
Query: 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQW 488
CIITKAGPGTIAEA+IRGLPIILNDFI GQE GNVPYVV+NG G FSKS +E A +V++W
Sbjct: 384 CIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKSSRETAKLVARW 443
Query: 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFV 529
FGP DELK MS+ ALKLA+P+AVF IV+D+HEL R++ +
Sbjct: 444 FGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGVI 484
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/407 (58%), Positives = 322/407 (79%), Gaps = 2/407 (0%)
Query: 129 LED--EGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186
LED E + + + ++ K VLILMSDTGGGHRASAEAI+ AF +FG++Y++ + D+W
Sbjct: 55 LEDKEEVMEMEQMGAERIKTVLILMSDTGGGHRASAEAIRDAFKIEFGDDYRIIIKDVWK 114
Query: 187 DHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQ 246
++T WP N + R Y F+VKH LW + ++GT+P+ IH+S +A + + A+E+ GLM+Y+
Sbjct: 115 EYTGWPLNDMERQYKFMVKHVGLWSVAFHGTSPKWIHKSYLSALAAYYAKEIEAGLMEYK 174
Query: 247 PDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVA 306
PDIIISVHPLMQH+PL +++ +GL KK++F TVITDL+TCH TWFH V+RCYCP+ +VA
Sbjct: 175 PDIIISVHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHRTWFHHGVSRCYCPSKEVA 234
Query: 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366
KRA+ GL SQI+V+GLPVRPSF + + K ELR+EL +D +LPAVLLMGGGEGMGP++
Sbjct: 235 KRALVDGLDDSQIRVFGLPVRPSFPRTILNKNELRKELEIDLNLPAVLLMGGGEGMGPVQ 294
Query: 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGA 426
TA ALG++LY+ PIGQ++VICGRNK LA+ L S +WKIPV+V+GF ++ME+ MGA
Sbjct: 295 KTALALGDSLYNSKESNPIGQLIVICGRNKVLASTLASHEWKIPVKVRGFETQMEKWMGA 354
Query: 427 CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVS 486
CDCIITKAGPGTIAEA+I GLPIILND+I GQE GNVPYVV+NG G F++SPKE A +V+
Sbjct: 355 CDCIITKAGPGTIAEALICGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVA 414
Query: 487 QWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
WF +ELK MS+NALKL++P+AVF IV+D+H L +Q+ +P ++
Sbjct: 415 DWFSNNKEELKKMSENALKLSQPEAVFDIVKDIHHLSQQQQRIPLFN 461
|
Involved in the synthesis of the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/394 (61%), Positives = 305/394 (77%), Gaps = 1/394 (0%)
Query: 133 GLPLN-GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPW 191
G+PL G + K VLILMSDTGGGHRASAEA++ AF +FG+ YQVFV DL ++ W
Sbjct: 57 GVPLPCGRKTAAAKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGW 116
Query: 192 PFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIII 251
P N + RSY F+++H LWK+ ++GT+PR +H AA + F A EV G+M+Y PDIII
Sbjct: 117 PLNDMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIII 176
Query: 252 SVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMK 311
SVHPLMQH+PL +L+ + L K+ F TVITDL+TCHPTWFH VTRCYCP+A+VAKRA+
Sbjct: 177 SVHPLMQHIPLWVLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALL 236
Query: 312 AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371
GL+ SQI+VYGLP+RPSF + V K ELR+EL MD DLPAVLLMGGGEGMGP+E TARA
Sbjct: 237 RGLEPSQIRVYGLPIRPSFCRAVLDKDELRKELDMDPDLPAVLLMGGGEGMGPVEETARA 296
Query: 372 LGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCII 431
L + LYD P+GQ++VICGRN+ L + L S+ W +PV+++GF +ME+ MGACDCII
Sbjct: 297 LSDELYDRRRRRPVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCII 356
Query: 432 TKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGP 491
TKAGPGTIAEA+IRGLPIILNDFI GQE GNVPYVV+NG G FSK P+E A V++WF
Sbjct: 357 TKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTT 416
Query: 492 KIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525
+EL+ S NALKLA+P+AVF IV+D+H+L +Q
Sbjct: 417 HTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQ 450
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O82730|MGDG2_ARATH Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/398 (61%), Positives = 313/398 (78%), Gaps = 1/398 (0%)
Query: 130 EDEG-LPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH 188
EDE L L I ++ K VLILMSDTGGGHRASAEAI+ AF +FG++Y+V V D+W ++
Sbjct: 53 EDESSLELIQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEY 112
Query: 189 TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPD 248
T WP N + RSY F+VKH LWK+ ++ T+P+ IH AA + + A+EV GLM+Y+P+
Sbjct: 113 TGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPE 172
Query: 249 IIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKR 308
IIISVHPLMQH+PL +L+ + L K+++F TVITDL+TCHPTWFH V RCYCP+ +VAKR
Sbjct: 173 IIISVHPLMQHIPLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKR 232
Query: 309 AMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368
A+ GL SQ++V+GLPVRPSF + V K +LR+EL MD+DL AVLLMGGGEGMGP++ T
Sbjct: 233 ALFDGLDESQVRVFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKET 292
Query: 369 ARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACD 428
A+AL LYD+ +PIGQ++VICGRNKKLA+ L + DWKIPV+V+GF ++ME+ MGACD
Sbjct: 293 AKALEEFLYDKENRKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACD 352
Query: 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQW 488
CIITKAGPGTIAE++IR LPIILND+I GQE GNVPYVVENG G F++SPKE A +V +W
Sbjct: 353 CIITKAGPGTIAESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEW 412
Query: 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526
F K DEL+ S NA KLA+P+AVF IV+D+ EL QR
Sbjct: 413 FSTKTDELEQTSDNARKLAQPEAVFDIVKDIDELSEQR 450
|
Involved in the synthesis of the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 536 | ||||||
| 359476186 | 528 | PREDICTED: monogalactosyldiacylglycerol | 0.977 | 0.992 | 0.789 | 0.0 | |
| 147843668 | 520 | hypothetical protein VITISV_023773 [Viti | 0.970 | 1.0 | 0.792 | 0.0 | |
| 224092635 | 537 | predicted protein [Populus trichocarpa] | 0.972 | 0.970 | 0.756 | 0.0 | |
| 255548682 | 535 | 1,2-diacylglycerol 3-beta-galactosyltran | 0.975 | 0.977 | 0.766 | 0.0 | |
| 75173454 | 535 | RecName: Full=Probable monogalactosyldia | 0.979 | 0.981 | 0.743 | 0.0 | |
| 224143351 | 537 | predicted protein [Populus trichocarpa] | 0.972 | 0.970 | 0.740 | 0.0 | |
| 449441848 | 525 | PREDICTED: monogalactosyldiacylglycerol | 0.977 | 0.998 | 0.757 | 0.0 | |
| 297802858 | 533 | hypothetical protein ARALYDRAFT_913288 [ | 0.983 | 0.988 | 0.749 | 0.0 | |
| 449493303 | 525 | PREDICTED: LOW QUALITY PROTEIN: monogala | 0.977 | 0.998 | 0.757 | 0.0 | |
| 75101048 | 525 | RecName: Full=Monogalactosyldiacylglycer | 0.977 | 0.998 | 0.755 | 0.0 |
| >gi|359476186|ref|XP_002283410.2| PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/533 (78%), Positives = 466/533 (87%), Gaps = 9/533 (1%)
Query: 4 NPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKRNC 63
PS+V+QE + + D +++G A SRF +SD YASF SNYLYFD +G++
Sbjct: 5 QPSSVTQEPSSVLDFESKLGAVALDSRFHLLNSDGYASFLSNYLYFDRSGGLVGEK--GP 62
Query: 64 KVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGIRD 123
K+ A+ S+S R G V RI EFN+A++FHCE++PIGFASV +NS + NG+R
Sbjct: 63 KLVASLSWSSR-------GVSRVRRIFGEFNRAVRFHCEKIPIGFASVHVNSGDNNGLRG 115
Query: 124 ENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183
+ GVLEDEGL LN +E ++PKKVLILMSDTGGGHRASAEAIKAAF+E+FG EYQVFVTD
Sbjct: 116 DGNGVLEDEGLVLNVVEAEKPKKVLILMSDTGGGHRASAEAIKAAFNEEFGEEYQVFVTD 175
Query: 184 LWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLM 243
LWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR++HQSNFAAT+TFIAREVAKGLM
Sbjct: 176 LWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRLVHQSNFAATTTFIAREVAKGLM 235
Query: 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTA 303
KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV+TDLSTCHPTWFHKLVTRCYCPT
Sbjct: 236 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTT 295
Query: 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363
DVAKRA+KAGLQ+SQIKVYGLPVRPSFVKPVRPK ELR+ELGMDEDLPAVLLMGGGEGMG
Sbjct: 296 DVAKRALKAGLQSSQIKVYGLPVRPSFVKPVRPKDELRKELGMDEDLPAVLLMGGGEGMG 355
Query: 364 PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEA 423
PIEATARALGNALY+E+LGE IGQVLVICGRNKKLA+KL S WKIPVQVKGFV+KMEE
Sbjct: 356 PIEATARALGNALYNEDLGESIGQVLVICGRNKKLADKLRSIPWKIPVQVKGFVTKMEEC 415
Query: 424 MGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIAN 483
MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQE GNVPYVVENGCGKFSKSPKEIA
Sbjct: 416 MGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEVGNVPYVVENGCGKFSKSPKEIAK 475
Query: 484 MVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSCVT 536
+V +WFGPK +EL MSQNALKLARPDAVF+IV DLHELVRQR+FV YSC T
Sbjct: 476 IVGEWFGPKAEELAVMSQNALKLARPDAVFKIVHDLHELVRQRSFVTQYSCTT 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147843668|emb|CAN84152.1| hypothetical protein VITISV_023773 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/529 (79%), Positives = 464/529 (87%), Gaps = 9/529 (1%)
Query: 8 VSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKRNCKVSA 67
++QE + + D +++G A SRF +SD YASF SNYLYFD +G++ K+ A
Sbjct: 1 MTQEPSSVLDFESKLGAVALDSRFHLLNSDGYASFLSNYLYFDRSGGLVGEK--GPKLVA 58
Query: 68 ASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGIRDENGG 127
+ S+S R G V RI EFN+A++FHCE++PIGFASV +NS + NG+R + G
Sbjct: 59 SLSWSSR-------GVSRVRRIFGEFNRAVRFHCEKIPIGFASVHVNSGDNNGLRGDGNG 111
Query: 128 VLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD 187
VLEDEGL LN +E ++PKKVLILMSDTGGGHRASAEAIKAAF+E+FG EYQVFVTDLWSD
Sbjct: 112 VLEDEGLVLNVVEAEKPKKVLILMSDTGGGHRASAEAIKAAFNEEFGEEYQVFVTDLWSD 171
Query: 188 HTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQP 247
HTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR++HQSNFAAT+TFIAREVAKGLMKYQP
Sbjct: 172 HTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRLVHQSNFAATTTFIAREVAKGLMKYQP 231
Query: 248 DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAK 307
DIIISVHPLMQHVPLRILRAKGLLKKIVFTTV+TDLSTCHPTWFHKLVTRCYCPT DVAK
Sbjct: 232 DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTTDVAK 291
Query: 308 RAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367
RA+KAGLQ+SQIKVYGLPVRPSFVKPVRPK ELR+ELGMDEDLPAVLLMGGGEGMGPIEA
Sbjct: 292 RALKAGLQSSQIKVYGLPVRPSFVKPVRPKDELRKELGMDEDLPAVLLMGGGEGMGPIEA 351
Query: 368 TARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427
TARALGNALY+E+LGEPIGQVLVICGRNKKLA+KL S WKIPVQVKGFV+KMEE MGAC
Sbjct: 352 TARALGNALYNEDLGEPIGQVLVICGRNKKLADKLRSIPWKIPVQVKGFVTKMEECMGAC 411
Query: 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQ 487
DCIITKAGPGTIAEAMIRGLPIILND+IAGQE GNVPYVVENGCGKFSKSPKEIA +V +
Sbjct: 412 DCIITKAGPGTIAEAMIRGLPIILNDYIAGQEVGNVPYVVENGCGKFSKSPKEIAKIVGE 471
Query: 488 WFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSCVT 536
WFGPK +EL MSQNALKLARPDAVF+IV DLHELVRQR+FV YSC T
Sbjct: 472 WFGPKAEELAVMSQNALKLARPDAVFKIVHDLHELVRQRSFVTQYSCTT 520
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092635|ref|XP_002309689.1| predicted protein [Populus trichocarpa] gi|222855665|gb|EEE93212.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/551 (75%), Positives = 471/551 (85%), Gaps = 30/551 (5%)
Query: 2 MQNPSTVS--QESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQR 59
M NPS V+ QE FD ++Q+G FAF+ + +S+ ++ KSN+L+FDS IGQ+
Sbjct: 1 MHNPSAVATNQEPGLAFDFLSQLGGFAFNKAVQSINSNGFSLSKSNFLFFDS---PIGQK 57
Query: 60 KRNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERN 119
R KV+A+ S S RSG S + +EFN+AI+FHCER+PIGFASV + S + N
Sbjct: 58 TR--KVNASLSLSSRSGFKS---------VWSEFNRAIRFHCERIPIGFASVQVGSGDNN 106
Query: 120 G--------------IRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAI 165
G +RD+ GVL D+G+PLNG+E PK+VLILMSDTGGGHRASAEAI
Sbjct: 107 GNDNISSDNGNGINGLRDDGCGVLVDDGVPLNGVEGVSPKRVLILMSDTGGGHRASAEAI 166
Query: 166 KAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225
KAAF+E+FG++YQVFVTDLWS+HTPWPFNQLP+SYNFLVKHG LWKMTYYG+APRVIHQS
Sbjct: 167 KAAFNEEFGDDYQVFVTDLWSEHTPWPFNQLPKSYNFLVKHGALWKMTYYGSAPRVIHQS 226
Query: 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST 285
NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLR+LRAKGLL+KI+FTTV+TDLST
Sbjct: 227 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRVLRAKGLLQKIIFTTVVTDLST 286
Query: 286 CHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELG 345
CHPTWFHKLVTRCYCP+ DV+KRAMKAGL+ SQIKVYGLPVRPSFVKPVRPK ELRR+LG
Sbjct: 287 CHPTWFHKLVTRCYCPSTDVSKRAMKAGLKPSQIKVYGLPVRPSFVKPVRPKGELRRQLG 346
Query: 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST 405
MDEDLPAVLLMGGGEGMGPIEATARALG++LYDENL EPIGQVLVICGRNKKL N+LLS
Sbjct: 347 MDEDLPAVLLMGGGEGMGPIEATARALGDSLYDENLEEPIGQVLVICGRNKKLTNRLLSI 406
Query: 406 DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY 465
DWK+PVQVKGFV+KMEE MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQE GNVPY
Sbjct: 407 DWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEVGNVPY 466
Query: 466 VVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525
VVENGCGKFSKSPKEIA +V++WFGPK DEL AMSQNALKLARPDAVF+IV DLHELVR
Sbjct: 467 VVENGCGKFSKSPKEIAKIVAEWFGPKADELSAMSQNALKLARPDAVFKIVHDLHELVRH 526
Query: 526 RNFVPHYSCVT 536
RNFVP +SC T
Sbjct: 527 RNFVPQFSCAT 537
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548682|ref|XP_002515397.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] gi|223545341|gb|EEF46846.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/543 (76%), Positives = 468/543 (86%), Gaps = 20/543 (3%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M +PSTV+QES+P FD V Q+GRFAF++ F + +S+ Y+S +SNYL+F+ + Q KR
Sbjct: 1 MHHPSTVTQESSPSFDFVGQLGRFAFNTAFQSINSNGYSSLRSNYLFFEC---PVAQTKR 57
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGI-------- 113
KV+ + S S GS +V +I +EFNK I+ HC+R+PIGFASV +
Sbjct: 58 --KVA-----NFASLSLGSGGSSSVRKIWSEFNKFIRIHCDRIPIGFASVQVGSGNSNGD 110
Query: 114 --NSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHE 171
N NG+RDEN VL D LPLNG E + P+KVLILMSDTGGGHRASAEAIK+AF+E
Sbjct: 111 NYNGDHSNGLRDENCDVLVDGDLPLNGKEAESPRKVLILMSDTGGGHRASAEAIKSAFNE 170
Query: 172 KFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATS 231
+FG++YQVF+TDLWS+HTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR+IHQSNFAATS
Sbjct: 171 EFGDDYQVFITDLWSEHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRLIHQSNFAATS 230
Query: 232 TFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWF 291
TFIAREVAKGLMKYQPD+IISVHPLMQHVPLRILRAKGLL+KI FTTV+TDLSTCHPTWF
Sbjct: 231 TFIAREVAKGLMKYQPDVIISVHPLMQHVPLRILRAKGLLQKIAFTTVVTDLSTCHPTWF 290
Query: 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLP 351
HKLVTRCYCPT DVAKRA+KAGLQ +Q KVYGLPVRPSFVKPVRPK ELR+ELGMDEDLP
Sbjct: 291 HKLVTRCYCPTTDVAKRALKAGLQPAQTKVYGLPVRPSFVKPVRPKGELRKELGMDEDLP 350
Query: 352 AVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPV 411
AVLLMGGGEGMGPIEATARALG +LYDENLGEPIGQ+LVICGRNKKLA+K+ S +WKIPV
Sbjct: 351 AVLLMGGGEGMGPIEATARALGESLYDENLGEPIGQILVICGRNKKLASKMRSINWKIPV 410
Query: 412 QVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC 471
QVKGFV+KMEE MGACDCIITKAGPGTIAEAMIRGLPIILN +IAGQE GNVPYVVEN C
Sbjct: 411 QVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEVGNVPYVVENKC 470
Query: 472 GKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPH 531
GKFSKSPKEIAN+V +WFGPK DELKAMSQNALKLARPDAVF+IV DL ELVRQRN++P
Sbjct: 471 GKFSKSPKEIANIVGEWFGPKADELKAMSQNALKLARPDAVFKIVHDLDELVRQRNYLPQ 530
Query: 532 YSC 534
YSC
Sbjct: 531 YSC 533
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75173454|sp|Q9FZL3.1|MGDG_TOBAC RecName: Full=Probable monogalactosyldiacylglycerol synthase, chloroplastic; Short=NtMGD1; AltName: Full=MGDG synthase type A; Flags: Precursor gi|9884653|dbj|BAB11980.1| MGDG synthase type A [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/537 (74%), Positives = 463/537 (86%), Gaps = 12/537 (2%)
Query: 1 MMQNPSTVSQESAPLFDLVAQVGRFAFS---SRFFNS--SSDEYASFKSNYLYFD-SFKS 54
MMQ+ S+V+QE F V+QVG F F+ SR S + D Y++ SNYLYFD + K
Sbjct: 1 MMQHSSSVTQEPTNPFGFVSQVGSFVFNNSCSRVSKSNFTLDSYSNLLSNYLYFDCNVKK 60
Query: 55 SIGQRKRNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGIN 114
K K S S S+ + SS SR++ +FNKAI+FHCE++P+GFASVG+N
Sbjct: 61 DSLNHKNKPKASPLLSLSISNKSASSF-----SRVLFQFNKAIRFHCEKIPLGFASVGVN 115
Query: 115 SSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFG 174
E NG+R+E G V+E+EG+P NG+E++ PKKVLILMSDTGGGHRASAEAI++AF+E+FG
Sbjct: 116 CGESNGVREE-GSVVENEGIPDNGVESEPPKKVLILMSDTGGGHRASAEAIRSAFNEEFG 174
Query: 175 NEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFI 234
++YQVF+TDLW++HTPWPFNQLPRSYNFLVKHG LW+MTYY TAPR++HQ+NFAATSTFI
Sbjct: 175 DKYQVFITDLWTEHTPWPFNQLPRSYNFLVKHGSLWRMTYYATAPRLVHQTNFAATSTFI 234
Query: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKL 294
AREVAKGLMKYQPDIIISVHPLMQHVPLRILR+KGLLKKI+FTTVITDLSTCHPTWFHKL
Sbjct: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIIFTTVITDLSTCHPTWFHKL 294
Query: 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354
VTRCYCP+ +VAKRA++AGL+ Q+KVYGLPVRPSFVKPV PKVELR+ELGM+E LPAVL
Sbjct: 295 VTRCYCPSEEVAKRALRAGLKPYQLKVYGLPVRPSFVKPVPPKVELRKELGMEEHLPAVL 354
Query: 355 LMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVK 414
LMGGGEGMGPIEATARALG+ALYDE GEPIGQVLVICGRNKKL N+L S WKIPVQVK
Sbjct: 355 LMGGGEGMGPIEATARALGDALYDEIHGEPIGQVLVICGRNKKLFNRLTSVQWKIPVQVK 414
Query: 415 GFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF 474
GFV+KMEE MGACDCIITKAGPGTIAEA+IRGLPIILND+IAGQEAGNVPYV+ENGCGKF
Sbjct: 415 GFVTKMEECMGACDCIITKAGPGTIAEAVIRGLPIILNDYIAGQEAGNVPYVIENGCGKF 474
Query: 475 SKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPH 531
SKSPK+IAN+V+QWFGP+ DEL+ MSQNAL+LARPDAVF+IV D+HELVRQRNF P
Sbjct: 475 SKSPKKIANIVAQWFGPRQDELRIMSQNALRLARPDAVFKIVHDMHELVRQRNFEPQ 531
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143351|ref|XP_002324925.1| predicted protein [Populus trichocarpa] gi|222866359|gb|EEF03490.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/551 (74%), Positives = 463/551 (84%), Gaps = 30/551 (5%)
Query: 2 MQNPS--TVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQR 59
M NPS T +QES +F+LVAQ+G FAF+ + +S+ + +S++L+FDS +G +
Sbjct: 1 MHNPSAVTTTQESGSVFELVAQMGGFAFNRAVQSINSNGLSFSRSDFLFFDS---PVGLK 57
Query: 60 KRNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASV-------- 111
R KV+A+ S S RSG S + +EFN+ I+ H ER+PIGFASV
Sbjct: 58 TR--KVNASLSLSSRSGFRS---------VWSEFNRTIRLHSERIPIGFASVQIGSGDNN 106
Query: 112 ------GINSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAI 165
+ + NG+RD+ G L D+G+ LNG+E PK+VLILMSDTGGGHRASAEAI
Sbjct: 107 GNNNIGSNDGNNTNGLRDDGCGALLDDGVRLNGVEGGSPKRVLILMSDTGGGHRASAEAI 166
Query: 166 KAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225
KAAF+E+FG++YQVF+TDLWS+HTPWPFNQLPRSYNFLVKH LWKMTYYGTAPRVIHQS
Sbjct: 167 KAAFNEEFGDDYQVFITDLWSEHTPWPFNQLPRSYNFLVKHEALWKMTYYGTAPRVIHQS 226
Query: 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST 285
NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL ILRAKGLL+KIVFTTV+TDLST
Sbjct: 227 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLHILRAKGLLQKIVFTTVVTDLST 286
Query: 286 CHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELG 345
CHPTWFHKLVTRCYCP+ DV+KRAMKAGL+ SQIKVYGLPVRPSFVKPVRPK ELRRELG
Sbjct: 287 CHPTWFHKLVTRCYCPSTDVSKRAMKAGLKPSQIKVYGLPVRPSFVKPVRPKGELRRELG 346
Query: 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST 405
MDEDLPAVLLMGGGEGMGPIEATARAL ++LYDENLGEP GQVLVICGRNKKL N+LLS
Sbjct: 347 MDEDLPAVLLMGGGEGMGPIEATARALADSLYDENLGEPKGQVLVICGRNKKLTNRLLSI 406
Query: 406 DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY 465
DWK+PV+V+GFV+KMEE MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQE GNVP+
Sbjct: 407 DWKVPVKVEGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEVGNVPH 466
Query: 466 VVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525
VVENGCGKFSKSPKEIA +V++WFG K DELKAMSQNALKLARPD+VF+IV DLHELVRQ
Sbjct: 467 VVENGCGKFSKSPKEIAKIVAEWFGSKADELKAMSQNALKLARPDSVFKIVHDLHELVRQ 526
Query: 526 RNFVPHYSCVT 536
RNFVP YS T
Sbjct: 527 RNFVPQYSRAT 537
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441848|ref|XP_004138694.1| PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/532 (75%), Positives = 456/532 (85%), Gaps = 8/532 (1%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M+NPSTV QE+ + D ++Q+G FAFSSRF N +S+ + S+ LY + F+
Sbjct: 1 MRNPSTVVQENGSVSDFISQLGYFAFSSRFLNLNSEGCSGSSSHSLYLNGFE-------- 52
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGI 121
N + S S SS GS ++ R VNEFN IKFHC + P+GFAS+G S E NGI
Sbjct: 53 NYRCVKRPPRSGASLSLSSRGSSSLRRFVNEFNNVIKFHCHKPPLGFASLGGVSDETNGI 112
Query: 122 RDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181
RD+ GV +D LPLN IE + PK+VLILMSDTGGGHRASAEAIKAAF+E+FGN YQVF+
Sbjct: 113 RDDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFI 172
Query: 182 TDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKG 241
TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYY TAP+VIHQSNFAATSTFIAREVAKG
Sbjct: 173 TDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKG 232
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301
LMKY+PDIIISVHPLMQHVP+RILR+KGLL KIVFTTV+TDLSTCHPTWFHKLVTRCYCP
Sbjct: 233 LMKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 292
Query: 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361
+ +VAKRA+KAGLQ S++KV+GLPVRPSFVKP+RPK+ELR+ELGMDE+LPAVLLMGGGEG
Sbjct: 293 STEVAKRALKAGLQPSKLKVFGLPVRPSFVKPIRPKIELRKELGMDENLPAVLLMGGGEG 352
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
MGPIEATA+AL ALYDEN GEPIGQVLVICG NKKLA +L S DWK+PVQVKGFV+KME
Sbjct: 353 MGPIEATAKALSKALYDENHGEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVTKME 412
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEI 481
E MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQEAGNVPYVVENGCGKFSKSPKEI
Sbjct: 413 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEI 472
Query: 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
AN+V++WFGPK DEL MSQNAL+LARPDAVF+IV DLHELV+QR+FVP YS
Sbjct: 473 ANIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQRSFVPQYS 524
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802858|ref|XP_002869313.1| hypothetical protein ARALYDRAFT_913288 [Arabidopsis lyrata subsp. lyrata] gi|297315149|gb|EFH45572.1| hypothetical protein ARALYDRAFT_913288 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/539 (74%), Positives = 461/539 (85%), Gaps = 12/539 (2%)
Query: 2 MQNPSTVSQESA-PLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRK 60
MQNPSTV+QESA P+FD ++ FA +R S SD YA N LYF+ F++ +
Sbjct: 1 MQNPSTVTQESAAPVFDFFPRLRGFASRNRSPCSISDGYALSSPNALYFNGFRTL--PSR 58
Query: 61 RNCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCER-LPIGFASVGIN--SSE 117
R K A+ SF+ +S SS + R +++FN I+FHC++ +P FASVG SS+
Sbjct: 59 RTGKTLASLSFNTKSSADSS-----LRRFISDFNSFIRFHCDKVVPESFASVGGVGLSSD 113
Query: 118 RNGIR-DENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE 176
NGIR D GGVL +EGLPLNG+E D+PKKVLILMSDTGGGHRASAEAIKAAF+++FG+E
Sbjct: 114 ENGIREDGTGGVLGEEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIKAAFNQEFGDE 173
Query: 177 YQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAR 236
YQVF+TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYYGT+PR+IHQSNFAATSTFIAR
Sbjct: 174 YQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIIHQSNFAATSTFIAR 233
Query: 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVT 296
E+A+GLMKYQPDIIISVHPLMQHVPLR+LR+KGLLKKIVFTTVITDLSTCHPTWFHKLVT
Sbjct: 234 EIAQGLMKYQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVT 293
Query: 297 RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLM 356
RCYCP+ +VAKRA KAGL+ SQIKVYGLPVRPSFVKPVRPKVELRRELGMDE+LPAVLLM
Sbjct: 294 RCYCPSTEVAKRAQKAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLM 353
Query: 357 GGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGF 416
GGGEGMGPIEATARAL +LYDE+LGE +GQVLVICGRNKKL +KL S DWKIPVQVKGF
Sbjct: 354 GGGEGMGPIEATARALAESLYDESLGEAVGQVLVICGRNKKLQSKLSSLDWKIPVQVKGF 413
Query: 417 VSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK 476
++KMEE MGACDCIITKAGPGTIAEAMIRGLPIILN +IAGQEAGNVPYVVENGCGKFSK
Sbjct: 414 ITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSK 473
Query: 477 SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSCV 535
SPKEI+ +V+ WFGP EL+ MSQNAL+LARP+AVF+IV D+HELVRQ+N +P SC
Sbjct: 474 SPKEISKIVADWFGPASKELEIMSQNALRLARPEAVFKIVHDMHELVRQKNCLPQLSCT 532
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449493303|ref|XP_004159249.1| PREDICTED: LOW QUALITY PROTEIN: monogalactosyldiacylglycerol synthase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/532 (75%), Positives = 455/532 (85%), Gaps = 8/532 (1%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M+NPSTV QE+ + D ++Q+G FAFSSRF N +S+ + S+ LY + F+
Sbjct: 1 MRNPSTVVQENGSVSDFISQLGYFAFSSRFLNLNSEGCSGSSSHSLYLNGFE-------- 52
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGI 121
N + S S SS GS ++ R VNEFN IKFHC + P+GFAS+G S E NGI
Sbjct: 53 NYRCVKRPPRSGASLSLSSRGSSSLRRFVNEFNNVIKFHCHKPPLGFASLGGVSDETNGI 112
Query: 122 RDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181
RD+ GV +D LPLN IE + PK+VLILMSDTGGGHRASAEAIKAAF+E+FGN YQVF+
Sbjct: 113 RDDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFI 172
Query: 182 TDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKG 241
TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYY TAP+VIHQSNFAATSTFIAREVAKG
Sbjct: 173 TDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKG 232
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301
LMKY+PDIIISVHPLMQHVP+RILR+KGLL KIVFTTV+TDLSTCHPTWFHKLVTRCYCP
Sbjct: 233 LMKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 292
Query: 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361
+ +VAKRA+KAGLQ S++KV+GLPVRPSFVKP+RPK+ELR+ELGMDE+LPAVLLMGGGEG
Sbjct: 293 STEVAKRALKAGLQPSKLKVFGLPVRPSFVKPIRPKIELRKELGMDENLPAVLLMGGGEG 352
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
MGPIEATA+AL ALYDEN GEPIGQVLVICG NKKLA +L S DWK+PVQVKGFV KME
Sbjct: 353 MGPIEATAKALSKALYDENHGEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVXKME 412
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEI 481
E MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQEAGNVPYVVENGCGKFSKSPKEI
Sbjct: 413 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEI 472
Query: 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
AN+V++WFGPK DEL MSQNAL+LARPDAVF+IV DLHELV+QR+FVP YS
Sbjct: 473 ANIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQRSFVPQYS 524
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75101048|sp|P93115.1|MGDG_CUCSA RecName: Full=Monogalactosyldiacylglycerol synthase, chloroplastic; Short=CsMGD1; Flags: Precursor gi|1805254|gb|AAC49624.1| monogalactosyldiacylglycerol synthase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/532 (75%), Positives = 455/532 (85%), Gaps = 8/532 (1%)
Query: 2 MQNPSTVSQESAPLFDLVAQVGRFAFSSRFFNSSSDEYASFKSNYLYFDSFKSSIGQRKR 61
M+NPSTV QE+ + D ++Q+G FAFSSRF N +S+ + S+ LY + F+
Sbjct: 1 MRNPSTVVQENGSVSDFISQLGYFAFSSRFLNLNSEGCSGSSSHSLYLNGFE-------- 52
Query: 62 NCKVSAASSFSLRSGKGSSVGSFNVSRIVNEFNKAIKFHCERLPIGFASVGINSSERNGI 121
N + S S SS GS ++ R VNEFN IKFHC + P+GFAS+G S E NGI
Sbjct: 53 NYRCVKRPPRSGASLSLSSRGSSSLRRFVNEFNNVIKFHCHKPPLGFASLGGVSDETNGI 112
Query: 122 RDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181
RD+ GV +D LPLN IE + PK+VLILMSDTGGGHRASAEAIKAAF+E+FGN YQVF+
Sbjct: 113 RDDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFI 172
Query: 182 TDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKG 241
TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYY TAP+VIHQSNFAATSTFIAREVAKG
Sbjct: 173 TDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKG 232
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301
LMKY+PDIIISVHPLMQHVP+RILR+KGLL KIVFTTV+TDLSTCHPTWFHKLVTRCYCP
Sbjct: 233 LMKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 292
Query: 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361
+ +VAKRA+ AGLQ S++KV+GLPVRPSFVKP+RPK+ELR+ELGMDE+LPAVLLMGGGEG
Sbjct: 293 STEVAKRALTAGLQPSKLKVFGLPVRPSFVKPIRPKIELRKELGMDENLPAVLLMGGGEG 352
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
MGPIEATA+AL ALYDEN GEPIGQVLVICG NKKLA +L S DWK+PVQVKGFV+KME
Sbjct: 353 MGPIEATAKALSKALYDENHGEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVTKME 412
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEI 481
E MGACDCIITKAGPGTIAEAMIRGLPIILND+IAGQEAGNVPYVVENGCGKFSKSPKEI
Sbjct: 413 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEI 472
Query: 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
AN+V++WFGPK DEL MSQNAL+LARPDAVF+IV DLHELV+QR+FVP YS
Sbjct: 473 ANIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQRSFVPQYS 524
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 536 | ||||||
| TAIR|locus:2124844 | 533 | MGD1 "monogalactosyl diacylgly | 0.981 | 0.986 | 0.726 | 5.5e-212 | |
| TAIR|locus:2149274 | 468 | MGD2 "monogalactosyldiacylglyc | 0.740 | 0.848 | 0.618 | 1.8e-133 | |
| TAIR|locus:2052662 | 465 | MGDC "monogalactosyldiacylglyc | 0.755 | 0.870 | 0.589 | 3e-133 | |
| UNIPROTKB|Q7XZR6 | 358 | OsMGD "Putative monogalactosyl | 0.625 | 0.935 | 0.632 | 1.4e-117 | |
| UNIPROTKB|P54166 | 382 | ugtP "Processive diacylglycero | 0.660 | 0.926 | 0.264 | 3.7e-27 | |
| UNIPROTKB|Q81YW9 | 388 | ugtP "Processive diacylglycero | 0.675 | 0.932 | 0.270 | 1e-26 | |
| TIGR_CMR|BA_0511 | 388 | BA_0511 "conserved hypothetica | 0.675 | 0.932 | 0.270 | 1e-26 | |
| TIGR_CMR|CHY_1043 | 367 | CHY_1043 "putative glycosyl tr | 0.421 | 0.615 | 0.293 | 1.9e-17 | |
| TIGR_CMR|CHY_2069 | 371 | CHY_2069 "UDP-N-acetylglucosam | 0.503 | 0.727 | 0.25 | 1.1e-08 | |
| TIGR_CMR|CBU_0135 | 358 | CBU_0135 "UDP-N-acetylglucosam | 0.356 | 0.533 | 0.236 | 1.4e-05 |
| TAIR|locus:2124844 MGD1 "monogalactosyl diacylglycerol synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
Identities = 391/538 (72%), Positives = 453/538 (84%)
Query: 2 MQNPSTVSQESA-PLFDLVAQVGXXXXXXXXXXXXXDEYASFKSNYLYFDSFKSSIGQRK 60
MQNPSTV+QESA P+FD ++ D YA SN LYF+ F++ +R
Sbjct: 1 MQNPSTVTQESAAPVFDFFPRLRGLTSRNRSPCSNSDGYALSSSNALYFNGFRTLPSRRM 60
Query: 61 RNCKVSAAXXXXXXXXXXXXVGSFNVSRIVNEFNKAIKFHCERL-PIGFASVG-IN-SSE 117
S + GS ++ R +++FN I+FHC+++ P FASVG + SS+
Sbjct: 61 GKTLASLSFNTKSSA------GS-SLRRFISDFNSFIRFHCDKVVPESFASVGGVGLSSD 113
Query: 118 RNGIRDEN-GGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE 176
NGIR+ GGVL +EGLPLNG+E D+PKKVLILMSDTGGGHRASAEAI+AAF+++FG+E
Sbjct: 114 ENGIRENGTGGVLGEEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDE 173
Query: 177 YQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAR 236
YQVF+TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYYGT+PR++HQSNFAATSTFIAR
Sbjct: 174 YQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAR 233
Query: 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVT 296
E+A+GLMKYQPDIIISVHPLMQHVPLR+LR+KGLLKKIVFTTVITDLSTCHPTWFHKLVT
Sbjct: 234 EIAQGLMKYQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVT 293
Query: 297 RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLM 356
RCYCP+ +VAKRA KAGL+ SQIKVYGLPVRPSFVKPVRPKVELRRELGMDE+LPAVLLM
Sbjct: 294 RCYCPSTEVAKRAQKAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLM 353
Query: 357 GGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGF 416
GGGEGMGPIEATARAL +ALYD+NLGE +GQVL+ICGRNKKL +KL S DWKIPVQVKGF
Sbjct: 354 GGGEGMGPIEATARALADALYDKNLGEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGF 413
Query: 417 VSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK 476
++KMEE MGACDCIITKAGPGTIAEAMIRGLPIILN +IAGQEAGNVPYVVENGCGKFSK
Sbjct: 414 ITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSK 473
Query: 477 SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYSC 534
SPKEI+ +V+ WFGP EL+ MSQNAL+LA+P+AVF+IV D+HELVR++N +P SC
Sbjct: 474 SPKEISKIVADWFGPASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQLSC 531
|
|
| TAIR|locus:2149274 MGD2 "monogalactosyldiacylglycerol synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 246/398 (61%), Positives = 313/398 (78%)
Query: 130 EDEG-LPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH 188
EDE L L I ++ K VLILMSDTGGGHRASAEAI+ AF +FG++Y+V V D+W ++
Sbjct: 53 EDESSLELIQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEY 112
Query: 189 TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPD 248
T WP N + RSY F+VKH LWK+ ++ T+P+ IH AA + + A+EV GLM+Y+P+
Sbjct: 113 TGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPE 172
Query: 249 IIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKR 308
IIISVHPLMQH+PL +L+ + L K+++F TVITDL+TCHPTWFH V RCYCP+ +VAKR
Sbjct: 173 IIISVHPLMQHIPLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKR 232
Query: 309 AMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368
A+ GL SQ++V+GLPVRPSF + V K +LR+EL MD+DL AVLLMGGGEGMGP++ T
Sbjct: 233 ALFDGLDESQVRVFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKET 292
Query: 369 ARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACD 428
A+AL LYD+ +PIGQ++VICGRNKKLA+ L + DWKIPV+V+GF ++ME+ MGACD
Sbjct: 293 AKALEEFLYDKENRKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACD 352
Query: 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQW 488
CIITKAGPGTIAE++IR LPIILND+I GQE GNVPYVVENG G F++SPKE A +V +W
Sbjct: 353 CIITKAGPGTIAESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEW 412
Query: 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526
F K DEL+ S NA KLA+P+AVF IV+D+ EL QR
Sbjct: 413 FSTKTDELEQTSDNARKLAQPEAVFDIVKDIDELSEQR 450
|
|
| TAIR|locus:2052662 MGDC "monogalactosyldiacylglycerol synthase type C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
Identities = 240/407 (58%), Positives = 322/407 (79%)
Query: 129 LED--EGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186
LED E + + + ++ K VLILMSDTGGGHRASAEAI+ AF +FG++Y++ + D+W
Sbjct: 55 LEDKEEVMEMEQMGAERIKTVLILMSDTGGGHRASAEAIRDAFKIEFGDDYRIIIKDVWK 114
Query: 187 DHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQ 246
++T WP N + R Y F+VKH LW + ++GT+P+ IH+S +A + + A+E+ GLM+Y+
Sbjct: 115 EYTGWPLNDMERQYKFMVKHVGLWSVAFHGTSPKWIHKSYLSALAAYYAKEIEAGLMEYK 174
Query: 247 PDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVA 306
PDIIISVHPLMQH+PL +++ +GL KK++F TVITDL+TCH TWFH V+RCYCP+ +VA
Sbjct: 175 PDIIISVHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHRTWFHHGVSRCYCPSKEVA 234
Query: 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366
KRA+ GL SQI+V+GLPVRPSF + + K ELR+EL +D +LPAVLLMGGGEGMGP++
Sbjct: 235 KRALVDGLDDSQIRVFGLPVRPSFPRTILNKNELRKELEIDLNLPAVLLMGGGEGMGPVQ 294
Query: 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGA 426
TA ALG++LY+ PIGQ++VICGRNK LA+ L S +WKIPV+V+GF ++ME+ MGA
Sbjct: 295 KTALALGDSLYNSKESNPIGQLIVICGRNKVLASTLASHEWKIPVKVRGFETQMEKWMGA 354
Query: 427 CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVS 486
CDCIITKAGPGTIAEA+I GLPIILND+I GQE GNVPYVV+NG G F++SPKE A +V+
Sbjct: 355 CDCIITKAGPGTIAEALICGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVA 414
Query: 487 QWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
WF +ELK MS+NALKL++P+AVF IV+D+H L +Q+ +P ++
Sbjct: 415 DWFSNNKEELKKMSENALKLSQPEAVFDIVKDIHHLSQQQQRIPLFN 461
|
|
| UNIPROTKB|Q7XZR6 OsMGD "Putative monogalactosyldiacylglycerol synthase" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
|---|
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 212/335 (63%), Positives = 272/335 (81%)
Query: 199 SYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQ 258
SY F+VKH LWK+ ++ T+PR +H AA ++F A++V GL KY+PDIIISVHPLMQ
Sbjct: 4 SYKFMVKHVQLWKVAFHTTSPRWVHCFYLAALASFYAKKVEAGLKKYKPDIIISVHPLMQ 63
Query: 259 HVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQ 318
H+PL +L+ +GL ++VF TVITDL+TCHPTWFH V RCYCP+ +VAKRA LQ SQ
Sbjct: 64 HIPLWVLKWQGLQNRVVFVTVITDLNTCHPTWFHADVNRCYCPSEEVAKRAALDDLQPSQ 123
Query: 319 IKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD 378
I+V+GLP+RPSF + V K +LR+EL +D +LPAVLLMGGGEGMGP++ TA+ALG +L+D
Sbjct: 124 IRVFGLPIRPSFCRAVLVKDDLRKELELDPELPAVLLMGGGEGMGPVKKTAKALGESLFD 183
Query: 379 ENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGT 438
E LG+PIGQ++VICGRNK L++ L + +WKIP++V+GF ++ME+ MGACDCIITKAGPGT
Sbjct: 184 EELGKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGFETQMEKWMGACDCIITKAGPGT 243
Query: 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA 498
IAEA+IRGLPIILNDFI GQE GNVPYVV+NG G FSKS +E A +V++WFGP DELK
Sbjct: 244 IAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKSSRETAKLVARWFGPDSDELKR 303
Query: 499 MSQNALKLARPDAVFRIVQDLHELVRQRNFVPHYS 533
MS+ ALKLA+P+AVF IV+D+HEL R++ + S
Sbjct: 304 MSEKALKLAQPEAVFDIVRDIHELSREQGVISQIS 338
|
|
| UNIPROTKB|P54166 ugtP "Processive diacylglycerol glucosyltransferase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] | Back alignment and assigned GO terms |
|---|
Score = 309 (113.8 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 101/382 (26%), Positives = 181/382 (47%)
Query: 145 KKVLILMSDTGGGHRASAEAIKAAFHE--KFGNEYQVFVTDLWSDHTPWPFNQLPRSYNF 202
K+VLIL ++ G GH + K + + + G ++ V V++L+ + P Y
Sbjct: 5 KRVLILTANYGNGH---VQVAKTLYEQCVRLGFQH-VTVSNLYQESNPIVSEVTQYLYLK 60
Query: 203 LVKHGP-LWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP 261
G +++ YYG ++ ++ F + + + + ++QPDIII+ P++ VP
Sbjct: 61 SFSIGKQFYRLFYYGV-DKIYNKRKFNIYFKMGNKRLGELVDEHQPDIIINTFPMIV-VP 118
Query: 262 LRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKV 321
R G + I V+TD H W H+ V + Y T V ++ ++ G S +K+
Sbjct: 119 -EYRRRTG--RVIPTFNVMTDFCL-HKIWVHENVDKYYVATDYVKEKLLEIGTHPSNVKI 174
Query: 322 YGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381
G+P+RP F + + P + ++ + + +L+M G G+ ++ N + D+ +
Sbjct: 175 TGIPIRPQFEESM-PVGPIYKKYNLSPNKKVLLIMAGAHGV--LKNVKELCENLVKDDQV 231
Query: 382 GEPIGQVLVICGRNKKLANKL--LSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTI 439
QV+V+CG+N L L L + ++V G+V +++E DC+ITK G T+
Sbjct: 232 -----QVVVVCGKNTALKESLSALEAENGDKLKVLGYVERIDELFRITDCMITKPGGITL 286
Query: 440 AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAM 499
EA G+P+IL + GQE N + + G +EI V+ + D L M
Sbjct: 287 TEATAIGVPVILYKPVPGQEKENANFFEDRGAAIVVNRHEEILESVTSLLADE-DTLHRM 345
Query: 500 SQNA--LKLARPDAVFRIVQDL 519
+N L LA V I++D+
Sbjct: 346 KKNIKDLHLANSSEV--ILEDI 365
|
|
| UNIPROTKB|Q81YW9 ugtP "Processive diacylglycerol glucosyltransferase" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 107/395 (27%), Positives = 185/395 (46%)
Query: 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVK 205
KVLIL + G GH A+ ++ F +K G + V V DL+ + P + + Y +L
Sbjct: 6 KVLILTAHYGNGHVQVAKTLEQTFRQK-GIK-DVIVCDLFGESHP-VITDITK-YLYLKS 61
Query: 206 H--GP-LWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQ-PDIIISVHPLMQHVP 261
+ G L+++ YYG I+ A+ R+ K L++ + PDI+I+ P++ VP
Sbjct: 62 YTIGKELYRLFYYGVEK--IYDKKIASWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VP 118
Query: 262 LRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKV 321
+ + G+ I V+TD H W H+ V R + T V K + G+ A QI
Sbjct: 119 -ELKKQTGI--SIPVYNVLTDFCV-HKIWIHREVDRYFVATDHVKKVMVDIGVPAEQIVE 174
Query: 322 YGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALGNALYDEN 380
G+P+R SF + P + + + + ++ +L++ G G +G ++ ++
Sbjct: 175 TGIPIRSSFELKINPDI-IYNKYQLCKNKKILLIVAGAHGVLGSVKELCQSF-------- 225
Query: 381 LGEPIGQVLVICGRNKKLANKLLSTDWKIP--VQVKGFVSKMEEAMGACDCIITKAGPGT 438
+ P QV+V+CG+N+ L L+ P ++V G+V ++E C+ITK G T
Sbjct: 226 MSVPDLQVVVVCGKNEALKQDLVGVQETNPDALKVFGYVENIDELFRVTSCMITKPGGIT 285
Query: 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA 498
++EA +P+IL + GQE N Y G + E+ D++K
Sbjct: 286 LSEAAALQVPVILYKPVPGQENENAMYFERKGAAVVIRDDSEVFAKTEALLQ---DDMKL 342
Query: 499 MS-QNALK-LARPDAVFRIVQD-LHELVRQRNFVP 530
+ + A+K + RP+ IV L E + N +P
Sbjct: 343 LQMKEAMKSIYRPEPADHIVDTILAENHVEPNHIP 377
|
|
| TIGR_CMR|BA_0511 BA_0511 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 107/395 (27%), Positives = 185/395 (46%)
Query: 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVK 205
KVLIL + G GH A+ ++ F +K G + V V DL+ + P + + Y +L
Sbjct: 6 KVLILTAHYGNGHVQVAKTLEQTFRQK-GIK-DVIVCDLFGESHP-VITDITK-YLYLKS 61
Query: 206 H--GP-LWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQ-PDIIISVHPLMQHVP 261
+ G L+++ YYG I+ A+ R+ K L++ + PDI+I+ P++ VP
Sbjct: 62 YTIGKELYRLFYYGVEK--IYDKKIASWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VP 118
Query: 262 LRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKV 321
+ + G+ I V+TD H W H+ V R + T V K + G+ A QI
Sbjct: 119 -ELKKQTGI--SIPVYNVLTDFCV-HKIWIHREVDRYFVATDHVKKVMVDIGVPAEQIVE 174
Query: 322 YGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALGNALYDEN 380
G+P+R SF + P + + + + ++ +L++ G G +G ++ ++
Sbjct: 175 TGIPIRSSFELKINPDI-IYNKYQLCKNKKILLIVAGAHGVLGSVKELCQSF-------- 225
Query: 381 LGEPIGQVLVICGRNKKLANKLLSTDWKIP--VQVKGFVSKMEEAMGACDCIITKAGPGT 438
+ P QV+V+CG+N+ L L+ P ++V G+V ++E C+ITK G T
Sbjct: 226 MSVPDLQVVVVCGKNEALKQDLVGVQETNPDALKVFGYVENIDELFRVTSCMITKPGGIT 285
Query: 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA 498
++EA +P+IL + GQE N Y G + E+ D++K
Sbjct: 286 LSEAAALQVPVILYKPVPGQENENAMYFERKGAAVVIRDDSEVFAKTEALLQ---DDMKL 342
Query: 499 MS-QNALK-LARPDAVFRIVQD-LHELVRQRNFVP 530
+ + A+K + RP+ IV L E + N +P
Sbjct: 343 LQMKEAMKSIYRPEPADHIVDTILAENHVEPNHIP 377
|
|
| TIGR_CMR|CHY_1043 CHY_1043 "putative glycosyl transferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 71/242 (29%), Positives = 116/242 (47%)
Query: 276 FTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR 335
+ TVITD H W + Y ++ ++ + G +I +G P+ P F +
Sbjct: 124 YATVITDYDY-HAFWLTQNSRFYYVAAEEIKEKLVGKGYSRDKIYAFGPPIDPVFAGEID 182
Query: 336 PKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN 395
+R + E +L+MGGG G+GP+ A+ L D N E + V+V+CG N
Sbjct: 183 ANA-VRERYQIREGTKIILMMGGGLGLGPLAEAAKTLT----DINK-EWV--VIVLCGHN 234
Query: 396 KKLAN--KLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILND 453
+KL K+L IPV F +++ E + A D +ITK G + AEA+ G P+I+ +
Sbjct: 235 QKLYRDLKVLGRRNLIPVP---FTAEVPEYLAAADIVITKPGGLSTAEALALGKPLIIIN 291
Query: 454 FIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513
+ GQE N ++ + G + E+ ++ + F + L ++ Q A KL R DA
Sbjct: 292 PLPGQEQRNAEFLQKKGAALYLSDVLELNKVLPELFFSQ--NLLSLRQKAAKLGRRDASI 349
Query: 514 RI 515
I
Sbjct: 350 NI 351
|
|
| TIGR_CMR|CHY_2069 CHY_2069 "UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 74/296 (25%), Positives = 131/296 (44%)
Query: 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTR---C 298
L K +PDI++ + ++ A +LK TVI + +P +K++
Sbjct: 88 LKKEKPDIVVGTGG---YASFPVVFAATVLK---IPTVIHE-QNAYPGIANKILAARVDA 140
Query: 299 YCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGG 358
C T AK+ MKA + GLPVR F + ELR+++G+ +D ++ GG
Sbjct: 141 VCLTFGEAKKRMKA----KNLYETGLPVRREFFTNAANRNELRKKMGVGKDELLLVAFGG 196
Query: 359 GEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-KKLANKLLSTDWKIPVQVKGFV 417
+G I + +G L + L + V RN + L K + + VQ+ ++
Sbjct: 197 SQGALTIN---KVVGYLLPEIMLRPNLRLVWATGPRNYENLKQKYKNLPER--VQMVPYI 251
Query: 418 SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF-IAGQ--EAGNVPYVVENGCGKF 474
M E + A D IT+AG T+AE +P +L + A + + N V +G
Sbjct: 252 DNMPEVLPAADLAITRAGAATLAEIAASKVPAVLIPYPYAAENHQEHNARAFVSHGAAVL 311
Query: 475 SKSPKEIANMVSQWFGPKID---ELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527
+ + + V P +D +L M++NA K+ R D++ I + L++ ++
Sbjct: 312 LRDAECSEDRVKATILPLLDSPEKLVKMAENAGKVLRRDSLKEITGIMEALLKPKS 367
|
|
| TIGR_CMR|CBU_0135 CBU_0135 "UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/211 (23%), Positives = 90/211 (42%)
Query: 315 QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374
Q ++ G PVR VK P+V L G L +L++GG +G AR++
Sbjct: 149 QNRKVITTGNPVRTELVKMPLPQVRLAARRG---PL-RILVLGGSQG-------ARSINQ 197
Query: 375 ALYDENLGEPIGQVLVICGRNKKLANKLLSTDW---KIPVQVKGFVSKMEEAMGACDCII 431
+ P + + + + + + + ++ KI +V F+S M A G D ++
Sbjct: 198 KMLAALSSYPRSEEIAVWHQTGQRDFEFIQKEYEKIKIEAKVDNFISDMAGAYGWADLVV 257
Query: 432 TKAGPGTIAEAMIRGLPIILNDF---IAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQW 488
+AG T+ E G+ I + + + N ++ + G + +W
Sbjct: 258 CRAGALTVCEIASVGVASIFIPYPHAVDNHQFHNARFLEQAGAAIIISEESLTETDLMRW 317
Query: 489 F---GPKIDELKAMSQNALKLARPDAVFRIV 516
F D L M++NA KLA+P+AV R++
Sbjct: 318 FEQFAQDRDRLLTMAENARKLAKPEAVQRVI 348
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SM44 | MGDG_SPIOL | 2, ., 4, ., 1, ., 4, 6 | 0.7354 | 0.9701 | 0.9961 | N/A | no |
| O81770 | MGDG1_ARATH | 2, ., 4, ., 1, ., 4, 6 | 0.7402 | 0.9832 | 0.9887 | yes | no |
| Q9FZL3 | MGDG_TOBAC | 2, ., 4, ., 1, ., 4, 6 | 0.7430 | 0.9794 | 0.9813 | N/A | no |
| Q9FZL4 | MGDG_SOYBN | 2, ., 4, ., 1, ., 4, 6 | 0.7338 | 0.9552 | 0.9660 | yes | no |
| Q69QJ7 | MGDG1_ORYSJ | 2, ., 4, ., 1, ., 4, 6 | 0.7489 | 0.8526 | 0.8542 | yes | no |
| P93115 | MGDG_CUCSA | 2, ., 4, ., 1, ., 4, 6 | 0.7556 | 0.9776 | 0.9980 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 536 | |||
| PLN02605 | 382 | PLN02605, PLN02605, monogalactosyldiacylglycerol s | 0.0 | |
| pfam06925 | 169 | pfam06925, MGDG_synth, Monogalactosyldiacylglycero | 2e-74 | |
| PRK13609 | 380 | PRK13609, PRK13609, diacylglycerol glucosyltransfe | 6e-47 | |
| PRK13608 | 391 | PRK13608, PRK13608, diacylglycerol glucosyltransfe | 2e-30 | |
| COG0707 | 357 | COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety | 4e-28 | |
| cd03785 | 350 | cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl | 1e-21 | |
| PRK00726 | 357 | PRK00726, murG, undecaprenyldiphospho-muramoylpent | 2e-17 | |
| TIGR01133 | 348 | TIGR01133, murG, undecaprenyldiphospho-muramoylpen | 5e-12 | |
| pfam04101 | 167 | pfam04101, Glyco_tran_28_C, Glycosyltransferase fa | 4e-08 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 2e-06 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-04 | |
| pfam13528 | 317 | pfam13528, Glyco_trans_1_3, Glycosyl transferase f | 0.002 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 0.003 |
| >gnl|CDD|215325 PLN02605, PLN02605, monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Score = 777 bits (2008), Expect = 0.0
Identities = 302/382 (79%), Positives = 342/382 (89%), Gaps = 2/382 (0%)
Query: 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH 206
VLILMSDTGGGHRASAEAIK AF +FG+EYQVF+ DLW +HTPWPFNQLPRSY FLVKH
Sbjct: 1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKH 60
Query: 207 GPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILR 266
LWKMTY+GT PR+IHQS FAATS F+AREVAKGLMKY+PDII+SVHPLMQHVPLR+LR
Sbjct: 61 PQLWKMTYHGTNPRLIHQSYFAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLR 120
Query: 267 AKG--LLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGL 324
+G L KKI FTTV+TDL TCHPTWFHK VTRC+CP+ +VAKRA+K GL+ SQI+VYGL
Sbjct: 121 WQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGL 180
Query: 325 PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP 384
P+RPSF + VRPK ELRRELGMDEDLPAVLLMGGGEGMGP+E TARALG++LYD+NLG+P
Sbjct: 181 PIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKP 240
Query: 385 IGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMI 444
IGQV+VICGRNKKL +KL S DWKIPV+V+GFV+ MEE MGACDCIITKAGPGTIAEA+I
Sbjct: 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALI 300
Query: 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNAL 504
RGLPIILN +I GQE GNVPYVV+NG G FS+SPKEIA +V++WFG K DEL+AMS+NAL
Sbjct: 301 RGLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENAL 360
Query: 505 KLARPDAVFRIVQDLHELVRQR 526
KLARP+AVF IV DLHELVRQR
Sbjct: 361 KLARPEAVFDIVHDLHELVRQR 382
|
Length = 382 |
| >gnl|CDD|219230 pfam06925, MGDG_synth, Monogalactosyldiacylglycerol (MGDG) synthase | Back alignment and domain information |
|---|
Score = 233 bits (595), Expect = 2e-74
Identities = 82/169 (48%), Positives = 115/169 (68%)
Query: 158 HRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217
H +AEA++ AF+ +FG+EYQV V D + P+ + RSY FLVKH L+++ YYGT
Sbjct: 1 HNQAAEALREAFNNEFGDEYQVVVHDSLKELNPFLLKFVLRSYLFLVKHSRLYRLLYYGT 60
Query: 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT 277
P++ H+S A +TF ARE+A L ++QPDIIIS HPL VPL +L++KGLLK+++
Sbjct: 61 EPKIPHKSILAKLATFFARELAALLKEFQPDIIISTHPLPAAVPLSVLKSKGLLKRVLVV 120
Query: 278 TVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPV 326
TV+TD TCHP W H + R Y P+ +V K A++ G+ S IKV G+PV
Sbjct: 121 TVVTDFRTCHPFWLHPEIDRYYVPSKEVKKEALEKGIDPSNIKVTGIPV 169
|
This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. Length = 169 |
| >gnl|CDD|237445 PRK13609, PRK13609, diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 6e-47
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 26/384 (6%)
Query: 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFL- 203
KVLIL + G GH A+ ++ F +K G + V V DL+ + P ++ + Y +L
Sbjct: 5 PKVLILTAHYGNGHVQVAKTLEQTFRQK-GIK-DVIVCDLFGESHPV-ITEITK-YLYLK 60
Query: 204 -VKHGP-LWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP 261
G L+++ YYG + + F+ + F + + L +PDI+I+ P++
Sbjct: 61 SYTIGKELYRLFYYGVEK-IYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPE 119
Query: 262 LRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKV 321
L+ K I V+TD H W H+ V R + T V K + G+ Q+
Sbjct: 120 LK----KQTGISIPTYNVLTDFCL-HKIWVHREVDRYFVATDHVKKVLVDIGVPPEQVVE 174
Query: 322 YGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALGNALYDEN 380
G+P+R SF + + + + + +L+M G G +G ++ ++L + +
Sbjct: 175 TGIPIRSSFELKI-NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSL---MSVPD 230
Query: 381 LGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVK--GFVSKMEEAMGACDCIITKAGPGT 438
L QV+V+CG+N+ L L P +K G+V ++E C+ITK G T
Sbjct: 231 L-----QVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGIT 285
Query: 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA 498
++EA G+P+IL + GQE N Y G + +E+ +L
Sbjct: 286 LSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLLQ 344
Query: 499 MSQNALKLARPDAVFRIVQDLHEL 522
M + L P+ IV D+
Sbjct: 345 MKEAMKSLYLPEPADHIVDDILAE 368
|
Length = 380 |
| >gnl|CDD|184179 PRK13608, PRK13608, diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 96/390 (24%), Positives = 163/390 (41%), Gaps = 33/390 (8%)
Query: 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTP--------WPFN 194
Q KK+LI+ G GH ++I ++ + V DL+ + P W N
Sbjct: 4 QNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYIN 63
Query: 195 QLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH 254
S+ + ++K YY ++ F + ++ L+K +PD+I+
Sbjct: 64 ----SFKYFRN---MYKGFYYSRPDKL--DKCF--YKYYGLNKLINLLIKEKPDLILLTF 112
Query: 255 PLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGL 314
P P+ + + I TV+TD H W TR Y T + + + G+
Sbjct: 113 P----TPVMSVLTEQFNINIPVATVMTDY-RLHKNWITPYSTRYYVATKETKQDFIDVGI 167
Query: 315 QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374
S +KV G+P+ F P+ K L +D D +L+ G G+ ++
Sbjct: 168 DPSTVKVTGIPIDNKFETPIDQKQWLIDN-NLDPDKQTILMSAGAFGV------SKGFDT 220
Query: 375 ALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIP-VQVKGFVSKMEEAMGACDCIITK 433
+ D QV++ICG++K+L L + V + G+ M E M + +ITK
Sbjct: 221 MITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITK 280
Query: 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKI 493
G TI+E + R +P+I + GQE N Y E G GK + +P+E +V+
Sbjct: 281 PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVAS-LTNGN 339
Query: 494 DELKAMSQNALKLARPDAVFRIVQDLHELV 523
++L M + A I +DL +L+
Sbjct: 340 EQLTNMISTMEQDKIKYATQTICRDLLDLI 369
|
Length = 391 |
| >gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-28
Identities = 90/388 (23%), Positives = 153/388 (39%), Gaps = 39/388 (10%)
Query: 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVK 205
K ++L + GGH A A+ K G E QV V + Q + +
Sbjct: 1 KKIVLTAGGTGGHVFPALALAEEL-AKRGWE-QVIVLGTGDGLEAFLVKQYGIEFELIPS 58
Query: 206 HGPLWKMTY-YGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRI 264
G K + AP + + A R++ L K +PD++I +V +
Sbjct: 59 GGLRRKGSLKLLKAPFKLLKGVLQA------RKI---LKKLKPDVVIGTGG---YVSGPV 106
Query: 265 LRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGL 324
A LL V + + +A ++AG++ + V G+
Sbjct: 107 GIAAKLLGIPVII-HEQN-AVPGLANKILSKFAKKVASAFPK---LEAGVKPENVVVTGI 161
Query: 325 PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP 384
PVRP F + +V L D +L+ GG +G + L +
Sbjct: 162 PVRPEFEELPAAEVRKDGRL----DKKTILVTGGSQGAKALNDLVPEALAKL-ANRI--- 213
Query: 385 IGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMI 444
QV+ G+N L + + V+V F+ M + A D +I++AG TIAE +
Sbjct: 214 --QVIHQTGKND-LEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLA 270
Query: 445 RGLPIIL---NDFIAGQEAGNVPYVVENGCGKF----SKSPKEIANMVSQWFGPKIDELK 497
G+P IL G + N ++ + G +P+++A ++ + ++LK
Sbjct: 271 LGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNP-EKLK 329
Query: 498 AMSQNALKLARPDAVFRIVQDLHELVRQ 525
AM++NA KL +PDA RI L L ++
Sbjct: 330 AMAENAKKLGKPDAAERIADLLLALAKK 357
|
Length = 357 |
| >gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 1e-21
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 36/242 (14%)
Query: 290 WFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDED 349
+ R + AK K + V G PVR + R R LG+
Sbjct: 130 LLARFADRVALSFPETAKYFPKD-----KAVVTGNPVREEILALDRE----RARLGLRPG 180
Query: 350 LPAVLLMGGGEGMGPIEATARALGNALYD--ENLGEPIGQVLVICGRNKKLANKLLSTDW 407
P +L+ GG +G ARA+ A+ + L QV+ G+ K +
Sbjct: 181 KPTLLVFGGSQG-------ARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEEL 233
Query: 408 KIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIIL--------NDFIAGQE 459
+ +V F+ M A A D +I++AG T+AE GLP IL + Q
Sbjct: 234 GVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDH----QT 289
Query: 460 AGNVPYVVENGCGKF----SKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRI 515
A N +V+ G +P+ +A + + + LKAM++ A LARPDA RI
Sbjct: 290 A-NARALVKAGAAVLIPQEELTPERLAAALLELLSDP-ERLKAMAEAARSLARPDAAERI 347
Query: 516 VQ 517
Sbjct: 348 AD 349
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350 |
| >gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 83.6 bits (208), Expect = 2e-17
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 316 ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375
+ V G PVR + P L E P +L++GG +G AR L A
Sbjct: 153 KPKAVVTGNPVREEILALAAPPARLAG----REGKPTLLVVGGSQG-------ARVLNEA 201
Query: 376 LYD--ENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIIT 432
+ + L E + QV+ G K ++ + I +V F+ M A A D +I
Sbjct: 202 VPEALALLPEAL-QVIHQTG--KGDLEEVRAAYAAGINAEVVPFIDDMAAAYAAADLVIC 258
Query: 433 KAGPGTIAEAMIRGLPIIL--------NDFIAGQEAGNVPYVVENGCGKFSK----SPKE 480
+AG T+AE GLP IL + Q A N +V+ G +P++
Sbjct: 259 RAGASTVAELAAAGLPAILVPLPHAADDH----QTA-NARALVDAGAALLIPQSDLTPEK 313
Query: 481 IANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524
+A + + + L+AM++ A L +PDA R+ + EL R
Sbjct: 314 LAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELAR 356
|
Length = 357 |
| >gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 5e-12
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 323 GLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG 382
G PVR P+ E P +L++GG +G + L ++ +
Sbjct: 156 GNPVRQEIRSLPVPRERFGL----REGKPTILVLGGSQGAKILNELVPKALAKLAEKGI- 210
Query: 383 EPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIA 440
Q++ G+N K+ N + I V M A A D +I++AG T+A
Sbjct: 211 ----QIVHQTGKNDLEKVKNVY--QELGIEAIVTFIDENMAAAYAAADLVISRAGASTVA 264
Query: 441 EAMIRGLPIILNDFI-----AGQEAGNVPYVVENGCGKF----SKSPKEIANMVSQWFGP 491
E G+P I I A + N ++ + G G P+++ + +
Sbjct: 265 ELAAAGVPAI---LIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK-LLL 320
Query: 492 KIDELKAMSQNALKLARPDAVFRIVQ 517
L+AM++ A KLA+PDA RI +
Sbjct: 321 DPANLEAMAEAARKLAKPDAAKRIAE 346
|
RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 348 |
| >gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 4e-08
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 380 NLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTI 439
L QVL G++ + + I V+V F+ M E + A D +I++AG GTI
Sbjct: 26 ELKGIEYQVLHQTGKSDYEPVNCKYSKFGINVEVFPFIDNMAEYIKAADLVISRAGAGTI 85
Query: 440 AEAMIRGLPIIL--NDFIAG--QEAGNVPYVVENGCGK----FSKSPKEIANMVSQWFGP 491
AE + G P IL AG Q+ N +V+ G +P+++ + +
Sbjct: 86 AELLALGKPAILVPRPKAAGEHQDN-NALELVKAGAALVLLQKELTPEKLVEALLKLL-L 143
Query: 492 KIDELKAMSQNALKLARPDAVFRI 515
K L M++ A DA+ R+
Sbjct: 144 KPLRLYEMNKAAKGSRLKDAIKRL 167
|
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 67/334 (20%), Positives = 120/334 (35%), Gaps = 77/334 (23%)
Query: 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVP-LRILRAKGLLKKIVFT 277
R+++ +FA ++ + + +PD+II+ PL+ + L + R KG V
Sbjct: 78 RLLNYLSFALSALLALLKRRR-----RPDVIIATSPPLLIALAALLLARLKG--APFVL- 129
Query: 278 TVITDLSTCHPTW----------------FHKLVTRCY-------CPTADVAKRAMKAGL 314
+ DL P KL Y + + + ++ G+
Sbjct: 130 -EVRDL---WPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGV 185
Query: 315 QASQIKVYGLP--VRPSFVKPVRPKVELRRELGMDEDLPAVLL----MGGGEGMGPIEAT 368
+I V +P V KP LR+ELG+D+ V+L +G +G+ +
Sbjct: 186 PPEKISV--IPNGVDLELFKPPPADESLRKELGLDDKF--VVLYAGNIGRAQGLDTLLEA 241
Query: 369 ARALGNALYDENLGEPIGQVLVICGRNKKLAN-KLLSTDWKIP-VQVKGFVSK--MEEAM 424
A L + I +I G + K L+ + V G V K + E +
Sbjct: 242 AALLKDR-------PDI--RFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELL 292
Query: 425 GACD-CIIT-KAGPGT-------IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS 475
A D ++ K GP + E M G P++ + + + V E G G
Sbjct: 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASV-----DGESAELVEEAGAGLVV 347
Query: 476 KS--PKEIANMVSQWFGPKIDELKAMSQNALKLA 507
P+ +A + + +E M +N +
Sbjct: 348 PPGDPEALAAAILELLDDP-EERAEMGENGRRYV 380
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 60/333 (18%), Positives = 102/333 (30%), Gaps = 71/333 (21%)
Query: 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPT--- 289
+A + + L + + D++ + L R G +V T +
Sbjct: 72 LLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLG--IPLVLTVHGLEFGRPGNELGL 129
Query: 290 ----------WFHKLVTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKV 338
+ R + + + G + +I V V +P
Sbjct: 130 LLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRP--APR 187
Query: 339 ELRRELGMDEDLPAVLLMGGGEGM-GP---IEATARALGNALYDENLGEPIGQV-LVICG 393
RR LG+ ED P +L +G G +EA A+ + V LVI G
Sbjct: 188 AARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLR----------KEYPDVRLVIVG 237
Query: 394 ---RNKKLANKLLSTDWKIPVQVKGFVSK--MEEAMGACDCII----TKAGPGTIAEAMI 444
++L V GFV + A D + + + EAM
Sbjct: 238 DGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMA 297
Query: 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKF---SKSPKEIANMVSQWFGPKIDEL----- 496
GLP+ +A + G +P VVE+G P+ +A I L
Sbjct: 298 AGLPV-----VAS-DVGGIPEVVEDGETGLLVPPGDPEALAE--------AILRLLDDPE 343
Query: 497 --KAMSQNALKLARPDAVF---RIVQDLHELVR 524
+ + + A + F R+ E+
Sbjct: 344 LRRRLGEAARERVA--ERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 75/370 (20%), Positives = 127/370 (34%), Gaps = 82/370 (22%)
Query: 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLV 204
K+L + TG GH + A + A G+E V + R+ L
Sbjct: 1 MKILYGVQGTGNGHISRARVLAEALR---GHEVDVLFSG--------------RAEELLS 43
Query: 205 KHGP---LWKMTYYGTAPRV-----IHQSNFAATSTFI-AREVAKGLMKYQPDIIIS-VH 254
P L +T+ RV I ++ R++ K L ++PD++I+
Sbjct: 44 PEFPYRRLPGLTFVTENGRVDYGKTILKNLQGLIRLPRLVRDLVKLLDLFRPDLVITDFE 103
Query: 255 PL------MQHVPLRILRAKGLLKKIVFTTVITDL--STCHPTWFHKLVTRCYCPTADVA 306
P+ Q VP G+ + F D+ F K V R A
Sbjct: 104 PISAWAAKRQGVPC-----VGIDHQYAFLACNYDIPKGLKFDALFEKYVLR-AFAPAQRR 157
Query: 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPA-----VLLMGGGEG 361
GL + P++P F +P+ P + LR EL + +L+ E
Sbjct: 158 -----LGLH------FYPPLKPHFEQPIVPPI-LRPEL---LEARPEEGGKILVYLPFED 202
Query: 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKME 421
+E A L +P I K + + ++ P +GF+ +
Sbjct: 203 ---LEDVAELL----------KPFPDYEFIVYGPNKEEGREGNLTFR-PFSEEGFLRDLA 248
Query: 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQ--EAGNVPYVVENGCGKFSKSPK 479
E C +I AG ++EA+ G P++L GQ + N Y+ G G
Sbjct: 249 E----CSAVICNAGFELLSEALYLGKPLLLVPL-DGQFEQTSNALYLERLGYGIVMDMED 303
Query: 480 EIANMVSQWF 489
++ ++
Sbjct: 304 LDPAVLRRFL 313
|
Length = 317 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.003
Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 19/101 (18%)
Query: 389 LVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCII--TKAG---PGTIAEAM 443
L I G + +L V GFV + + + D + + G P + EA+
Sbjct: 37 LHIIGSGPEELARLAP-----NVHFLGFVEDLAALLASADVALAPLRFGAGSPLKLLEAL 91
Query: 444 IRGLPIILNDFIAGQ--EAGNVPYVVENGCGKFSKSPKEIA 482
GLP++ D A E +V + P+E A
Sbjct: 92 AAGLPVVATDIGAEGLPEDLGWGVLVAD-------DPEEFA 125
|
Length = 134 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 536 | |||
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 100.0 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.98 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.97 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.97 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.97 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.97 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.96 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.96 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.96 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.95 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.95 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.95 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.94 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.94 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.94 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.94 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.94 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.94 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.94 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.94 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.93 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.93 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.93 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.93 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.93 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.93 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.93 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.93 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.93 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.93 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.93 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.93 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.93 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.93 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.93 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.92 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.92 | |
| PLN02316 | 1036 | synthase/transferase | 99.92 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.92 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.92 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.92 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.91 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.91 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.91 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.91 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.91 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.91 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.91 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.91 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.91 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.91 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.9 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.9 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.9 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.9 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.89 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.89 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.89 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.89 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.88 | |
| PLN00142 | 815 | sucrose synthase | 99.88 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.88 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.87 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.86 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.85 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.83 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.81 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.81 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.81 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.81 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.79 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.78 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.78 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.76 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.72 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 99.72 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.71 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.7 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 99.7 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.68 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.66 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.66 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.66 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.65 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.64 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.63 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.62 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.6 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.6 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.6 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.58 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 99.53 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 99.53 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.53 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.52 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.52 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.5 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 99.44 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.42 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.38 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.36 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.3 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 99.27 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 99.26 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 99.25 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.24 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.23 | |
| PLN00414 | 446 | glycosyltransferase family protein | 99.2 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.19 | |
| PLN02208 | 442 | glycosyltransferase family protein | 99.19 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.17 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 99.16 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 99.16 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 99.15 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 99.14 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 99.12 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.11 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.1 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.08 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 99.06 | |
| PLN02764 | 453 | glycosyltransferase family protein | 99.05 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.05 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.03 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 98.97 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.94 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 98.9 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 98.86 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 98.86 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 98.8 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 98.78 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 98.76 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 98.69 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 98.59 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.57 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 98.56 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.5 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.48 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.47 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.43 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 98.42 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 98.41 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.32 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 98.3 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 98.18 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 98.14 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 98.13 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 98.1 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.07 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 98.04 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.99 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.93 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.9 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 97.82 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.76 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 97.71 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 97.7 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 97.67 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.57 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.56 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.51 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.5 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 97.48 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.4 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.3 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.24 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 97.05 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.24 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 96.22 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 96.13 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 95.75 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 95.7 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.67 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 95.35 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 95.24 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 95.13 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 94.96 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 94.66 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.91 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 93.61 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 93.11 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 87.5 | |
| TIGR03646 | 144 | YtoQ_fam YtoQ family protein. Members of this fami | 81.77 | |
| TIGR00730 | 178 | conserved hypothetical protein, DprA/Smf-related, | 81.01 |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-44 Score=374.13 Aligned_cols=379 Identities=79% Similarity=1.322 Sum_probs=310.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchh
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSN 226 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~ 226 (536)
|||++.++|+||...+.+|+++|.++.+++++|.+.|......++........|..+.+.+.+|...|..+.........
T Consensus 1 ilils~~~G~GH~~aa~al~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~Y~~~~~~p~~~~~~y~~~~~~~~~~~~ 80 (382)
T PLN02605 1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKHPQLWKMTYHGTNPRLIHQSY 80 (382)
T ss_pred CEEEEEcCCcChHHHHHHHHHHHHhhcCCCeeEEEEehhhhcCcchhhhHHHHHHHHhhCHHHHHHHHHhcCchhhhHHH
Confidence 68999999999999999999999876565688889998877666655557778988777744788777655433222222
Q ss_pred hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcC--CCCCceEEEEecCCCCcccccccccCCEEEEcCHH
Q 036427 227 FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKG--LLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTAD 304 (536)
Q Consensus 227 ~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g--~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~ 304 (536)
.........+++.++|++++||+||+++|++..+|+.++...+ ...++|++++++|+...|..|+.+.+|.++++|+.
T Consensus 81 ~~~~~~~~~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~~~w~~~~~d~~~~~s~~ 160 (382)
T PLN02605 81 FAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCPSEE 160 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcCcccccCCCCEEEECCHH
Confidence 2233444567888999999999999999987665544443321 12358999999999768999999999999999999
Q ss_pred HHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCC
Q 036427 305 VAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP 384 (536)
Q Consensus 305 ~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~ 384 (536)
.++.+.+.|++++++.++|+|+++.+......++++++++|++++.++++++||+.+.+....+++++.+.+.+.....+
T Consensus 161 ~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~ 240 (382)
T PLN02605 161 VAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKP 240 (382)
T ss_pred HHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCC
Confidence 99999999999999999999999877654445678899999999999999999999988888888877654310000134
Q ss_pred CcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 385 IGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 385 ~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+.++++++|.++++.+.+++.....+|+++|+++++.++|+.||++|+++||+|++|||+||+|+|+++...++|.+|+.
T Consensus 241 ~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~ 320 (382)
T PLN02605 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVP 320 (382)
T ss_pred CceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHH
Confidence 56677889988766666665544567999999999999999999999999999999999999999999988889989999
Q ss_pred hHhhCCceeecCCHHHHHHHHHHHhCCC-HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 465 YVVENGCGKFSKSPKEIANMVSQWFGPK-IDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 465 ~lv~~g~g~~~~d~~~La~~I~~ll~~d-~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
.+++.|.|..+.|+++++++|.++++ + ++.+++|++++++++.+++++++++.+.+++++|
T Consensus 321 ~i~~~g~g~~~~~~~~la~~i~~ll~-~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~~~ 382 (382)
T PLN02605 321 YVVDNGFGAFSESPKEIARIVAEWFG-DKSDELEAMSENALKLARPEAVFDIVHDLHELVRQR 382 (382)
T ss_pred HHHhCCceeecCCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhhCC
Confidence 99999999888999999999999999 7 9999999999999999999999999999988775
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=339.35 Aligned_cols=365 Identities=25% Similarity=0.389 Sum_probs=288.6
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCCccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTAPRV 221 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~~~~ 221 (536)
.+|||||++.++|+||.+.|.+|+++|.++.+++.+|.++|......++........|....+..| +|...|+.+...
T Consensus 4 ~~~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~- 82 (391)
T PRK13608 4 QNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDK- 82 (391)
T ss_pred CCceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchh-
Confidence 457999999999999999999999999987433478888898776555433335567877776655 676666543311
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~ 301 (536)
... ........+++.++|++++||+||+++|... +..+++.+.. ++|++++++|+. .+..|+.+.+|.+++.
T Consensus 83 ~~~---~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~---~~~l~~~~~~-~iP~~~v~td~~-~~~~w~~~~~d~~~v~ 154 (391)
T PRK13608 83 LDK---CFYKYYGLNKLINLLIKEKPDLILLTFPTPV---MSVLTEQFNI-NIPVATVMTDYR-LHKNWITPYSTRYYVA 154 (391)
T ss_pred hHH---HHHHHHHHHHHHHHHHHhCcCEEEECCcHHH---HHHHHHhcCC-CCCEEEEeCCCC-cccccccCCCCEEEEC
Confidence 111 1122223468889999999999999987642 2223333222 499999999985 8889999999999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhhhcc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALYDEN 380 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~~~~ 380 (536)
++.+++.+.+.|++++++.++|+|+++.+.... ++.+++++++++++.+++++++|+.+. +.+..+++++.+.
T Consensus 155 s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~-~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~----- 228 (391)
T PRK13608 155 TKETKQDFIDVGIDPSTVKVTGIPIDNKFETPI-DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK----- 228 (391)
T ss_pred CHHHHHHHHHcCCCHHHEEEECeecChHhcccc-cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc-----
Confidence 999999999999999999999999987765432 355677889999888888888998884 6666666654321
Q ss_pred cCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccc
Q 036427 381 LGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+++++++++|.+.++.+.+++ .....+|++.||++++.++|+.||++|+.+||.|+.|||++|+|+|+++...++|
T Consensus 229 --~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe 306 (391)
T PRK13608 229 --SANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAPGQE 306 (391)
T ss_pred --CCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCCCcc
Confidence 3567777888988655454443 2344689999999999999999999999999999999999999999997656677
Q ss_pred cCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
..|+..+.+.|.|..+.|+++++++|.++++ |++.+++|++++++.+.+++++++++.+.+++..
T Consensus 307 ~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 307 LENALYFEEKGFGKIADTPEEAIKIVASLTN-GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGH 371 (391)
T ss_pred hhHHHHHHhCCcEEEeCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhh
Confidence 7799999999999988999999999999999 9999999999999999999999999999888754
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=320.97 Aligned_cols=372 Identities=26% Similarity=0.404 Sum_probs=273.5
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceE-EEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCC
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQ-VFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTA 218 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~e-V~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~ 218 (536)
|.++|||||+++++|+||...+.+|+++|.++ |++ +.++|......++........|....+..| +|+..+....
T Consensus 1 ~~~~~rili~t~~~G~GH~~~a~al~~~l~~~---g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 77 (380)
T PRK13609 1 MIKNPKVLILTAHYGNGHVQVAKTLEQTFRQK---GIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVE 77 (380)
T ss_pred CCCCCeEEEEEcCCCchHHHHHHHHHHHHHhc---CCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence 34678999999999999999999999999998 554 566676544322211112223433333322 4444443222
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEE
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRC 298 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~v 298 (536)
.... ............+++.+++++++||+||++++... ++.. .+..+. ++|++++++|+. .+..|+++.+|.+
T Consensus 78 ~~~~-~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~-~~~~-~~~~~~--~ip~~~~~td~~-~~~~~~~~~ad~i 151 (380)
T PRK13609 78 KIYD-KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VPEL-KKQTGI--SIPTYNVLTDFC-LHKIWVHREVDRY 151 (380)
T ss_pred cccc-hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH-HHHH-HHhcCC--CCCeEEEeCCCC-CCcccccCCCCEE
Confidence 1111 11111122233478899999999999999987653 2322 222232 489998888875 7888999999999
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhh
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALY 377 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~ 377 (536)
+++++..++.+.+.|++++++.++|+|+++.+.... ++..++++++++++.+++++++|+.+. +.+..+++++.+
T Consensus 152 ~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~-~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~--- 227 (380)
T PRK13609 152 FVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKI-NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMS--- 227 (380)
T ss_pred EECCHHHHHHHHHcCCChhHEEEECcccChHHcCcC-CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhh---
Confidence 999999999999999999999999999977554332 345678899999888888888887764 455555554431
Q ss_pred hcccCCCCcEEEEEecCCHHHHHHHHcC--CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 378 DENLGEPIGQVLVICGRNKKLANKLLST--DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~~l~~~l~~~--~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
.+++++++++|.+..+.+.+++. ....+|+++|+++++.++|+.||++|+.+|+.|++|||++|+|+|+++..
T Consensus 228 -----~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~ 302 (380)
T PRK13609 228 -----VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVILYKPV 302 (380)
T ss_pred -----CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEECCCC
Confidence 35677777778665444444332 22358999999999999999999999988999999999999999998654
Q ss_pred CccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCCcCC
Q 036427 456 AGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPH 531 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~~~~~ 531 (536)
++++..|+..+.+.|.+....|+++++++|.++++ |++.+++|++++++++..++++++++.+++.+....++.|
T Consensus 303 ~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~~~~ 377 (380)
T PRK13609 303 PGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQ-DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVEPNLAQ 377 (380)
T ss_pred CCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhhhhhHh
Confidence 45555577788888888877899999999999999 9999999999999999999999999999988765444433
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-30 Score=264.75 Aligned_cols=343 Identities=24% Similarity=0.350 Sum_probs=252.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCce-EEEEeecccccCCCCCC--cchhHHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEY-QVFVTDLWSDHTPWPFN--QLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~-eV~v~~~~~~~~~~~~~--~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|+|++..+++ |||..++++|+++|.++ |+ +|.+............. ..... .....++.+. ..
T Consensus 1 ~~ivl~~gGT-GGHv~pAlAl~~~l~~~---g~~~v~~~~~~~~~e~~l~~~~~~~~~---~I~~~~~~~~-------~~ 66 (357)
T COG0707 1 KKIVLTAGGT-GGHVFPALALAEELAKR---GWEQVIVLGTGDGLEAFLVKQYGIEFE---LIPSGGLRRK-------GS 66 (357)
T ss_pred CeEEEEeCCC-ccchhHHHHHHHHHHhh---CccEEEEecccccceeeeccccCceEE---EEeccccccc-------Cc
Confidence 5788888888 79999999999999999 66 45444221111110000 00000 0000000000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYC 300 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~ 300 (536)
.......+.......+.+++|++++||+|++++++.+..+.+.++..+ +|++.+.+|... ...+++.+.++.|.+
T Consensus 67 ~~~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~----iPv~ihEqn~~~G~ank~~~~~a~~V~~ 142 (357)
T COG0707 67 LKLLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLG----IPVIIHEQNAVPGLANKILSKFAKKVAS 142 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCC----CCEEEEecCCCcchhHHHhHHhhceeee
Confidence 000000112333445778899999999999999988876666666655 999887777642 344778899999998
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcc
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDEN 380 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~ 380 (536)
..+. ...+.+++++.++|+|++.++.. . +....+.... .++++|+++||+.|.+.+.+.+..+...+.
T Consensus 143 ~f~~-----~~~~~~~~~~~~tG~Pvr~~~~~-~-~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~--- 210 (357)
T COG0707 143 AFPK-----LEAGVKPENVVVTGIPVRPEFEE-L-PAAEVRKDGR--LDKKTILVTGGSQGAKALNDLVPEALAKLA--- 210 (357)
T ss_pred cccc-----ccccCCCCceEEecCcccHHhhc-c-chhhhhhhcc--CCCcEEEEECCcchhHHHHHHHHHHHHHhh---
Confidence 8776 23456778899999999998876 1 1222332222 278899999999999999988888887764
Q ss_pred cCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCc-
Q 036427 381 LGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAG- 457 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~- 457 (536)
.++++++++|... +..+.+.+.+. +.+.+|.++|.++|+.||++|+.+|++|+.|.+++|+|+|.+|.+..
T Consensus 211 ---~~~~v~~~~G~~~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~ 284 (357)
T COG0707 211 ---NRIQVIHQTGKNDLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGA 284 (357)
T ss_pred ---hCeEEEEEcCcchHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCc
Confidence 2578889999986 33344444333 99999999999999999999999999999999999999999999755
Q ss_pred --cccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 458 --QEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 458 --~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+|+.||..+++.|.+.++. +++.+.+.|.++++ +++.+++|++++++...+++.+++++.++.+.+
T Consensus 285 ~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~-~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~~ 356 (357)
T COG0707 285 DGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLS-NPEKLKAMAENAKKLGKPDAAERIADLLLALAK 356 (357)
T ss_pred cchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 7778999999999999986 57799999999999 999999999999999999999999999887654
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=260.65 Aligned_cols=345 Identities=20% Similarity=0.256 Sum_probs=237.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc-c
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV-I 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~-~ 222 (536)
||||+|.+.+. |||++.+..|++.|.++ ||+|.++............. ...+............. .
T Consensus 1 ~~~i~i~~~g~-gG~~~~~~~la~~L~~~---g~ev~vv~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~ 67 (357)
T PRK00726 1 MKKILLAGGGT-GGHVFPALALAEELKKR---GWEVLYLGTARGMEARLVPK---------AGIEFHFIPSGGLRRKGSL 67 (357)
T ss_pred CcEEEEEcCcc-hHhhhHHHHHHHHHHhC---CCEEEEEECCCchhhhcccc---------CCCcEEEEeccCcCCCChH
Confidence 58999999999 69999999999999998 78887765422100000000 00011111100000000 0
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
..............++.+++++++||+||+++.........+.+..+ +|++.+.++.. ....+|+++.+|.+++.
T Consensus 68 ~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 68 ANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLG----IPLVIHEQNAVPGLANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcC----CCEEEEcCCCCccHHHHHHHHHhchheEC
Confidence 00001112234456778889999999999998544332233333333 78876555432 12346778899999998
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
++.... + .+..+++++|||++.+.+.+.. .+++++++++.++++++||+.+.+.....+..+.+.+.
T Consensus 144 ~~~~~~---~--~~~~~i~vi~n~v~~~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~---- 210 (357)
T PRK00726 144 FPGAFP---E--FFKPKAVVTGNPVREEILALAA----PPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLP---- 210 (357)
T ss_pred chhhhh---c--cCCCCEEEECCCCChHhhcccc----hhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh----
Confidence 875432 1 5778999999999987654322 22356777777888888887766655555533333332
Q ss_pred CCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC---
Q 036427 382 GEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA--- 456 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~--- 456 (536)
.. ...++++|.++ ++.+.++ .++ +|.+.|+++++.++|+.||++|+++|+++++|||++|+|+|+++.++
T Consensus 211 -~~-~~~~~~~G~g~~~~~~~~~~-~~~--~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 211 -EA-LQVIHQTGKGDLEEVRAAYA-AGI--NAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred -hC-cEEEEEcCCCcHHHHHHHhh-cCC--cEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCc
Confidence 11 24466788875 3333343 333 39999999999999999999999999999999999999999998753
Q ss_pred ccccCChhhHhhCCceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 457 GQEAGNVPYVVENGCGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+.+.+++..+.+.|.|.+++ | +++|+++|+++++ |++.+++|++++++++++++.+++++.|.++++
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLS-DPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 33445677888999998874 4 9999999999999 999999999999999999999999999998765
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-29 Score=256.83 Aligned_cols=338 Identities=23% Similarity=0.290 Sum_probs=234.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||+|.++++ |||.+++..|+++|.++ ||+|.++....... ....+ ....................+.
T Consensus 1 ~~~~~~~~~-gG~~~~~~~la~~l~~~---G~ev~v~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 67 (350)
T cd03785 1 RILIAGGGT-GGHIFPALALAEELRER---GAEVLFLGTKRGLE---ARLVP------KAGIPLHTIPVGGLRRKGSLKK 67 (350)
T ss_pred CEEEEecCc-hhhhhHHHHHHHHHHhC---CCEEEEEECCCcch---hhccc------ccCCceEEEEecCcCCCChHHH
Confidence 688999999 69999999999999999 88887765422100 00000 0000111111100000000000
Q ss_pred hh-hhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEEcCH
Q 036427 226 NF-AATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 226 ~~-~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~~S~ 303 (536)
.. .........++.+++++.+||+||++++.........++..+ +|++.+.++... ...+++.+.+|.++++++
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~----~p~v~~~~~~~~~~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 68 LKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLG----IPLVIHEQNAVPGLANRLLARFADRVALSFP 143 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhC----CCEEEEcCCCCccHHHHHHHHhhCEEEEcch
Confidence 00 111133445778889999999999987654322233334333 787755444221 223556777899999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
...+. .++.++.++||+++...+.+. .. +++++++++.++++++||..+.++..+++..+.+.+. .
T Consensus 144 ~~~~~-----~~~~~~~~i~n~v~~~~~~~~---~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-----~ 209 (350)
T cd03785 144 ETAKY-----FPKDKAVVTGNPVREEILALD---RE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL-----R 209 (350)
T ss_pred hhhhc-----CCCCcEEEECCCCchHHhhhh---hh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-----c
Confidence 88765 467889999999988765432 12 6778888888888888887776655555544444443 2
Q ss_pred CCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC---cc
Q 036427 384 PIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA---GQ 458 (536)
Q Consensus 384 ~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~---~~ 458 (536)
++..+++++|.+. ++.+.+++. ..+|++.|+++++.++|+.||++|+++|++|++|||++|+|+|+++..+ +.
T Consensus 210 ~~~~~~~i~G~g~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~ 287 (350)
T cd03785 210 KRLQVIHQTGKGDLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDH 287 (350)
T ss_pred cCeEEEEEcCCccHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCc
Confidence 4556666778874 333444443 4689999999999999999999999999999999999999999998653 34
Q ss_pred ccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+..+++.+.+.|+|.+++ |+++++++|..+++ +++.+++|+++++++++.++.++|++
T Consensus 288 ~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 288 QTANARALVKAGAAVLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 445678899999998875 79999999999999 99999999999999999999999876
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=253.27 Aligned_cols=340 Identities=16% Similarity=0.202 Sum_probs=237.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc-cc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR-VI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~-~~ 222 (536)
|+||+|.++|| |||..++++++++|+++ +++|.++........ ..++. + .-+............ .+
T Consensus 1 ~~~i~~~~GGT-GGHi~Pala~a~~l~~~---g~~v~~vg~~~~~e~---~l~~~-~-----g~~~~~~~~~~l~~~~~~ 67 (352)
T PRK12446 1 MKKIVFTGGGS-AGHVTPNLAIIPYLKED---NWDISYIGSHQGIEK---TIIEK-E-----NIPYYSISSGKLRRYFDL 67 (352)
T ss_pred CCeEEEEcCCc-HHHHHHHHHHHHHHHhC---CCEEEEEECCCcccc---ccCcc-c-----CCcEEEEeccCcCCCchH
Confidence 46899999999 89999999999999987 889966642221100 00110 0 000000000000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
..............+..+++++++||+||+++.+.+..+..+++..+ +|++.+..+.. ....+.+.++++.+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~----~p~~i~e~n~~~g~~nr~~~~~a~~v~~~ 143 (352)
T PRK12446 68 KNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNR----VPVLLHESDMTPGLANKIALRFASKIFVT 143 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcC----CCEEEECCCCCccHHHHHHHHhhCEEEEE
Confidence 01111112233345667889999999999999887655555566555 88755444321 12235678899999988
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
.++..+ +++++++.++|+|+++++.... ++..++.+++++++++++++||+.|.+.+.+.+..+...+.
T Consensus 144 f~~~~~-----~~~~~k~~~tG~Pvr~~~~~~~--~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---- 212 (352)
T PRK12446 144 FEEAAK-----HLPKEKVIYTGSPVREEVLKGN--REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---- 212 (352)
T ss_pred ccchhh-----hCCCCCeEEECCcCCccccccc--chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc----
Confidence 766443 3456789999999999875432 44566788998899999999999999888887777665542
Q ss_pred CCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh-hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC----C
Q 036427 382 GEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV-SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI----A 456 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v-~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~----~ 456 (536)
.++++++++|... +.+..... .++...+|. ++|.++|+.||++|+.+|++|+.|++++|+|+|++|.. .
T Consensus 213 --~~~~vv~~~G~~~-~~~~~~~~---~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~ 286 (352)
T PRK12446 213 --LKYQIVHLCGKGN-LDDSLQNK---EGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASR 286 (352)
T ss_pred --cCcEEEEEeCCch-HHHHHhhc---CCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCC
Confidence 2377888999875 33323222 245667888 68999999999999999999999999999999999874 2
Q ss_pred ccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 457 GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
++|..|++.+.+.|.+..+. +++.|.+++.++++ |++.++ +++.++...++.+++++.+.+
T Consensus 287 ~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~-~~~~~~---~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 287 GDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSH-NNEKYK---TALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred chHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHc-CHHHHH---HHHHHcCCCCHHHHHHHHHHh
Confidence 46777999999999998764 68999999999998 876653 566777888899988887754
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-27 Score=245.29 Aligned_cols=350 Identities=15% Similarity=0.125 Sum_probs=243.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||++++....||..+.+..|++.|.++ |++|.+++..... .... .. +................
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~---G~~v~v~~~~~~~---~~~~---------~~-~~~~~~~~~~~~~~~~~ 64 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARR---GHEVHFITSSRPF---RLDE---------YS-PNIFFHEVEVPQYPLFQ 64 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhc---CCceEEEecCCCc---chhh---------hc-cCeEEEEecccccchhh
Confidence 7999998665589999999999999999 7788776542210 0000 00 00000000000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------cccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------HPTWFHKL 294 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~~~~~ 294 (536)
. ..........+.+++++.+||+||++.+.....+..++++.....++|++...|+.... ..++..+.
T Consensus 65 ~--~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~ 142 (371)
T cd04962 65 Y--PPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEK 142 (371)
T ss_pred c--chhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhh
Confidence 0 00122334677888999999999998755433333333332211247887666532210 11344578
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+|.+++.|+...+.+.+.+..+.++.+++|+++...+.+. .....++++++.++.++++++|+....|++..+++++..
T Consensus 143 ~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~-~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~ 221 (371)
T cd04962 143 SDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPK-PDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAK 221 (371)
T ss_pred CCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCC-chHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHH
Confidence 9999999999999887765556789999999987655443 234566778888888888889988888888888877755
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
... ..+.++ +++|.++ .+.+..++.+..++|++.|+.+++.++|+.||++|+|| | |++++|||++|+
T Consensus 222 l~~-----~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~ 295 (371)
T cd04962 222 VRK-----EVPARL-LLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGV 295 (371)
T ss_pred HHh-----cCCceE-EEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC
Confidence 432 234554 5556664 34555666677788999999999999999999999998 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHh
Q 036427 448 PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~~ 524 (536)
|||+++.++..+ .+.+...|.+++ |+++++++|..+++ +++.+++|++++++. .+.++++.+++.+.++++
T Consensus 296 PvI~s~~~~~~e-----~i~~~~~G~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 296 PVVASNAGGIPE-----VVKHGETGFLVDVGDVEAMAEYALSLLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CEEEeCCCCchh-----hhcCCCceEEcCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999998765433 234445677765 89999999999999 999999999999998 567999999999998876
Q ss_pred h
Q 036427 525 Q 525 (536)
Q Consensus 525 ~ 525 (536)
+
T Consensus 370 ~ 370 (371)
T cd04962 370 R 370 (371)
T ss_pred h
Confidence 4
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=254.29 Aligned_cols=339 Identities=14% Similarity=0.196 Sum_probs=226.8
Q ss_pred CCCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 142 DQPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 142 ~~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.++|||++++.. .-||...+...|++.|.++ ||+|.++...... +..+.++.. ... ..+...++.
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~---G~eV~vlt~~~~~-~~~~~g~~v-----~~~-~~~~~~~~~- 124 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM---GDEVLVVTTDEGV-PQEFHGAKV-----IGS-WSFPCPFYQ- 124 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHC---CCeEEEEecCCCC-CccccCcee-----ecc-CCcCCccCC-
Confidence 677999998642 1267788999999999998 7888776542211 100111100 000 000000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCC-cc--------
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLST-CH-------- 287 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~-~~-------- 287 (536)
... .......++.+++++.+||+||++.+..... .+.+++..+ +|++...|+... ..
T Consensus 125 --~~~-------~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~----ip~V~~~h~~~~~~~~~~~~~~~ 191 (465)
T PLN02871 125 --KVP-------LSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLC----VPLVMSYHTHVPVYIPRYTFSWL 191 (465)
T ss_pred --Cce-------eeccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhC----CCEEEEEecCchhhhhcccchhh
Confidence 000 0111112567788999999999987654322 233344444 788754443211 00
Q ss_pred -------cccccccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcC-CCCCCCEEEEecC
Q 036427 288 -------PTWFHKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELG-MDEDLPAVLLMGG 358 (536)
Q Consensus 288 -------~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lg-i~~~~~~il~~gg 358 (536)
.+++.+.+|.++++|+...+.+.+.+. +..++.+++|++|.+.+.+.......++.+. ..++.++|+++|+
T Consensus 192 ~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 192 VKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCC
Confidence 134567899999999999999988764 4678999999999887765444455565553 3345677777766
Q ss_pred CCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--
Q 036427 359 GEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-- 434 (536)
Q Consensus 359 ~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-- 434 (536)
....|+...+++++. . .+++++ +++|+++ ..+.++++....+|+|+|++ +++.++|+.||++|+||
T Consensus 272 l~~~K~~~~li~a~~-~-------~~~~~l-~ivG~G~-~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~ 341 (465)
T PLN02871 272 LGAEKNLDFLKRVME-R-------LPGARL-AFVGDGP-YREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSES 341 (465)
T ss_pred CchhhhHHHHHHHHH-h-------CCCcEE-EEEeCCh-HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcc
Confidence 554455444433332 1 245665 5667776 23344443234579999998 68999999999999998
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
+ |++++|||+||+|||+++.++..+ +++ .+.|.+++ |+++++++|.++++ +++.+++|++++++.
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~e------iv~~~~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~ 414 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPD------IIPPDQEGKTGFLYTPGDVDDCVEKLETLLA-DPELRERMGAAAREE 414 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHh------hhhcCCCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 3 899999999999999998654333 444 45677764 89999999999999 999999999999999
Q ss_pred cCCchHHHHHHHHHH
Q 036427 507 ARPDAVFRIVQDLHE 521 (536)
Q Consensus 507 a~~~~~~~i~~~i~~ 521 (536)
+..+.|+.+++++.+
T Consensus 415 ~~~fsw~~~a~~l~~ 429 (465)
T PLN02871 415 VEKWDWRAATRKLRN 429 (465)
T ss_pred HHhCCHHHHHHHHHH
Confidence 888999999998876
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=247.13 Aligned_cols=338 Identities=20% Similarity=0.239 Sum_probs=223.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+|++++. +||...+..|+++|.++ ||+|.++...... .... .. .+ ..+................
T Consensus 1 ~~i~~~~g~~-~g~~~~~~~La~~L~~~---g~eV~vv~~~~~~-~~~~--~~-~~-----g~~~~~i~~~~~~~~~~~~ 67 (348)
T TIGR01133 1 KKVVLAAGGT-GGHIFPALAVAEELIKR---GVEVLWLGTKRGL-EKRL--VP-KA-----GIEFYFIPVGGLRRKGSFR 67 (348)
T ss_pred CeEEEEeCcc-HHHHhHHHHHHHHHHhC---CCEEEEEeCCCcc-hhcc--cc-cC-----CCceEEEeccCcCCCChHH
Confidence 6999999999 69999888999999998 7888776431110 0000 00 00 0000010000000000000
Q ss_pred hh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEcC
Q 036427 225 SN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~S 302 (536)
.+ ..........++.+++++++||+||++.+........+.+..+ +|++.+.++.. ....+|+.+.+|.+++.+
T Consensus 68 ~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 68 LIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLG----IPLFHHEQNAVPGLTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcC----CCEEEECCCCCccHHHHHHHHHhCeeEECc
Confidence 00 0111233445788899999999999987654332222334333 67764333322 123468889999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~ 382 (536)
+...+.+ +..++|||++..++.+.. .+++++++++.++++++||+.+.+...+.+..+.+.+.
T Consensus 144 ~~~~~~~--------~~~~i~n~v~~~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~----- 206 (348)
T TIGR01133 144 PGAKDHF--------EAVLVGNPVRQEIRSLPV----PRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLA----- 206 (348)
T ss_pred hhHhhcC--------CceEEcCCcCHHHhcccc----hhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHh-----
Confidence 9887653 247899999876554321 13457788788888899988776554554433334443
Q ss_pred CCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC--cc
Q 036427 383 EPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA--GQ 458 (536)
Q Consensus 383 ~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~--~~ 458 (536)
+.+.++++++|.++ ++.+.+++.++...+.+. +. ++.++|+.||++|+++|+++++|||++|+|+|+++..+ ++
T Consensus 207 ~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~ 284 (348)
T TIGR01133 207 EKGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADD 284 (348)
T ss_pred hcCcEEEEECCcchHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccc
Confidence 23456666777764 334444444443334444 22 89999999999999999999999999999999998754 23
Q ss_pred ccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
+..+++.+.+.+.|.+++ ++++|+++|+++++ |++.+++|+++++++..++..+++++.|
T Consensus 285 ~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 348 (348)
T TIGR01133 285 QYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLAKPDAAKRIAELI 348 (348)
T ss_pred hhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCccHHHHHHhhC
Confidence 444667788888888874 39999999999999 9999999999999999999999998753
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-26 Score=235.09 Aligned_cols=344 Identities=14% Similarity=0.127 Sum_probs=233.8
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCCcccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~~~~~ 222 (536)
.||+++..++ .||.++.+..|++.|.++ ++++.++...... .+... ..+.+. .... ... ..
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~---~~~~~v~~~~~~~------~~~~~---~~~~~i~~~~~----~~~-~~ 64 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPAD---RYRHAVVALTEVS------AFRKR---IQRPDVAFYAL----HKQ-PG 64 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhcccc---ccceEEEEcCCCC------hhHHH---HHhcCceEEEe----CCC-CC
Confidence 5899888664 389999999999999887 6666555432211 11111 111111 1110 000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEec--CCCCcc---------ccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVIT--DLSTCH---------PTW 290 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~--d~~~~~---------~~~ 290 (536)
.......++.+++++.+||+||++..... .....++..+ +|.. ...+ +....+ .++
T Consensus 65 -------~~~~~~~~l~~~l~~~~~Divh~~~~~~~-~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 132 (374)
T TIGR03088 65 -------KDVAVYPQLYRLLRQLRPDIVHTRNLAAL-EAQLPAALAG----VPARIHGEHGRDVFDLDGSNWKYRWLRRL 132 (374)
T ss_pred -------CChHHHHHHHHHHHHhCCCEEEEcchhHH-HHHHHHHhcC----CCeEEEeecCcccccchhhHHHHHHHHHH
Confidence 11223457888899999999999865322 1223334444 4432 1111 111111 122
Q ss_pred ccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
..+.+|.++++|+...+.+.+ .++++.++.+++|+++.+.+.+.. .....++.....++.++++++|+....|+...+
T Consensus 133 ~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~l 212 (374)
T TIGR03088 133 YRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTL 212 (374)
T ss_pred HHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHH
Confidence 345789999999999998876 477888999999999987765432 222233334445666788888888777888888
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
++++.+...+.....+++++ +++|.++ ++.+.+++.++..++.|.|+.+++.++|+.||++|+|| | |.+++|
T Consensus 213 i~a~~~l~~~~~~~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lE 291 (374)
T TIGR03088 213 VRAFALLVRQLPEGAERLRL-VIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILE 291 (374)
T ss_pred HHHHHHHHHhCcccccceEE-EEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHH
Confidence 87776554321111235554 5557664 44556667778888999999999999999999999998 4 899999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
||+||+|||+++.++..| ++++ ..|.+++ |+++++++|..+++ +++.+.+|+++|++.+ ..++++.+++
T Consensus 292 Ama~G~Pvv~s~~~g~~e------~i~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~ 364 (374)
T TIGR03088 292 AMASGLPVIATAVGGNPE------LVQHGVTGALVPPGDAVALARALQPYVS-DPAARRAHGAAGRARAEQQFSINAMVA 364 (374)
T ss_pred HHHcCCCEEEcCCCCcHH------HhcCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999765444 4444 4566664 89999999999999 9999999999999987 5799999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++++
T Consensus 365 ~~~~~y~~ 372 (374)
T TIGR03088 365 AYAGLYDQ 372 (374)
T ss_pred HHHHHHHH
Confidence 99998764
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-25 Score=234.02 Aligned_cols=358 Identities=15% Similarity=0.187 Sum_probs=233.4
Q ss_pred ceEEEEeC----CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc--chhHHHH-HHhhccccceeecCC
Q 036427 145 KKVLILMS----DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ--LPRSYNF-LVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~----~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~--~~~~y~~-~~~~~~l~~~~~~~~ 217 (536)
|||++++. .. ||...+...|+++|.++ ||+|.|++....-..+.... ....|.. ....-+.++......
T Consensus 1 mkIlii~~~~~P~~-~g~~~~~~~l~~~L~~~---G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPEL-TGIGKYTGEMAEWLAAR---GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP 76 (412)
T ss_pred CeEEEEecCCCCCc-cchhhhHHHHHHHHHHC---CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC
Confidence 79999973 34 67778899999999998 78887765421111110000 0000000 000111111111000
Q ss_pred -CcccccchhhhhhhHHHHHHHHHHHH--hhCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCC-------
Q 036427 218 -APRVIHQSNFAATSTFIAREVAKGLM--KYQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLST------- 285 (536)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~l~~~l~--~~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~------- 285 (536)
......+ ... ...+....+..+++ +.+||+||++.+..... .+.+++..+ +|++...+|+..
T Consensus 77 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~----~~~v~~~~d~~~~~~~~~~ 150 (412)
T PRK10307 77 KQPSGLKR-LLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSG----ARTWLHIQDYEVDAAFGLG 150 (412)
T ss_pred CCccHHHH-HHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhC----CCEEEEeccCCHHHHHHhC
Confidence 0000000 000 00111112222222 27899999987654322 223344444 787776666531
Q ss_pred -c-----------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCc--hHHHHHHcCCCCCCC
Q 036427 286 -C-----------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRP--KVELRRELGMDEDLP 351 (536)
Q Consensus 286 -~-----------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~--~~~~r~~lgi~~~~~ 351 (536)
. ..++..+.+|.++++|+..++.+.+.+.++.++.+++|+++.+.+.+... ...+++.++++++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
T PRK10307 151 LLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKK 230 (412)
T ss_pred CccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCE
Confidence 0 01234667999999999999999888888889999999999876654322 345788899988777
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhh
Q 036427 352 AVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGA 426 (536)
Q Consensus 352 ~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~ 426 (536)
+++++|+....++...+++++.. +. ..+++++ +++|.++ ++++.+++.++. +|+|+|++ +++.++|+.
T Consensus 231 ~i~~~G~l~~~kg~~~li~a~~~-l~----~~~~~~l-~ivG~g~~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~ 303 (412)
T PRK10307 231 IVLYSGNIGEKQGLELVIDAARR-LR----DRPDLIF-VICGQGGGKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKM 303 (412)
T ss_pred EEEEcCccccccCHHHHHHHHHH-hc----cCCCeEE-EEECCChhHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHh
Confidence 88887776666777777777653 32 2456665 5567775 344455556665 79999997 489999999
Q ss_pred cCeEEECC---C-----hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHH
Q 036427 427 CDCIITKA---G-----PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDEL 496 (536)
Q Consensus 427 aDv~V~~s---G-----~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~ 496 (536)
||++|+|+ + |.+++|||+||+|||+++.++.. ...+++ +.|.+++ |+++++++|.++++ +++.+
T Consensus 304 aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~----~~~~i~-~~G~~~~~~d~~~la~~i~~l~~-~~~~~ 377 (412)
T PRK10307 304 ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE----LGQLVE-GIGVCVEPESVEALVAAIAALAR-QALLR 377 (412)
T ss_pred cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch----HHHHHh-CCcEEeCCCCHHHHHHHHHHHHh-CHHHH
Confidence 99999986 1 56789999999999999865421 123555 6777774 89999999999999 99999
Q ss_pred HHHHHHHHHhcC-CchHHHHHHHHHHHHhh
Q 036427 497 KAMSQNALKLAR-PDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 497 ~~m~~~a~~~a~-~~~~~~i~~~i~~l~~~ 525 (536)
++|+++|++.+. .++++.+++.+.+++++
T Consensus 378 ~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 378 PKLGTVAREYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 999999999876 58999999988887764
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=235.50 Aligned_cols=344 Identities=14% Similarity=0.082 Sum_probs=231.0
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||.+.++..|+++|.++ |++|.|.+.............. ............ ...............+..
T Consensus 20 GG~e~~v~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (405)
T TIGR03449 20 GGMNVYILETATELARR---GIEVDIFTRATRPSQPPVVEVA-------PGVRVRNVVAGP-YEGLDKEDLPTQLCAFTG 88 (405)
T ss_pred CCceehHHHHHHHHhhC---CCEEEEEecccCCCCCCccccC-------CCcEEEEecCCC-cccCCHHHHHHHHHHHHH
Confidence 89999999999999998 7888777543211100000000 000000000000 000000000000011111
Q ss_pred HHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------c----c----ccccccC
Q 036427 236 REVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------H----P----TWFHKLV 295 (536)
Q Consensus 236 ~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------~----~----~~~~~~~ 295 (536)
..+..++++ .+||+||++........+.+.+.. ++|++...|+.... . . +++.+.+
T Consensus 89 ~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~----~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 164 (405)
T TIGR03449 89 GVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRW----GVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNA 164 (405)
T ss_pred HHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhc----CCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhc
Confidence 223344443 479999998743322223333333 37888766654210 0 0 1245688
Q ss_pred CEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 296 TRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 296 d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
|.+++.|+...+.+.+ ++.+..++.+++|+++.+.+.+. ++...+.+++++++.++++++|+....|+...+++++.+
T Consensus 165 d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~ 243 (405)
T TIGR03449 165 DRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPG-DRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAE 243 (405)
T ss_pred CeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCC-cHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHH
Confidence 9999999998888765 57777899999999998776544 355677888988888889899888777888878877766
Q ss_pred HhhhcccCCCC--cEEEEEec---CC-H---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHH
Q 036427 375 ALYDENLGEPI--GQVLVICG---RN-K---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTI 439 (536)
Q Consensus 375 ~l~~~~~~~~~--~~~lvi~G---~~-~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tl 439 (536)
... ..++ +++++++| .+ + ++.+..++.++.++|+|+|++ +++.++|+.||++|+|+ | |+++
T Consensus 244 l~~----~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~ 319 (405)
T TIGR03449 244 LLD----RDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVA 319 (405)
T ss_pred HHh----hCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHH
Confidence 543 2344 65555543 13 2 345556667788899999997 58999999999999997 3 8999
Q ss_pred HHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 440 AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+|||++|+|||+++.++..+. +.+...|++++ |+++++++|.++++ +++.+++|++++++.++.++|+++++
T Consensus 320 lEAma~G~Pvi~~~~~~~~e~-----i~~~~~g~~~~~~d~~~la~~i~~~l~-~~~~~~~~~~~~~~~~~~fsw~~~~~ 393 (405)
T TIGR03449 320 MEAQACGTPVVAARVGGLPVA-----VADGETGLLVDGHDPADWADALARLLD-DPRTRIRMGAAAVEHAAGFSWAATAD 393 (405)
T ss_pred HHHHHcCCCEEEecCCCcHhh-----hccCCceEECCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999997554432 44445677775 89999999999999 99999999999999888899999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
++.+++.+
T Consensus 394 ~~~~~y~~ 401 (405)
T TIGR03449 394 GLLSSYRD 401 (405)
T ss_pred HHHHHHHH
Confidence 99998865
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-25 Score=226.78 Aligned_cols=343 Identities=17% Similarity=0.169 Sum_probs=231.5
Q ss_pred eEEEEeCCCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.+ ||+.+.+..|++.|.+. |++|.+.+....... ..... .... ...... ..
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~----~~~~~---~~~~---~~~~~~----~~--- 60 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAK---GHQVAIISLTGESEV----KPPID---ATII---LNLNMS----KN--- 60 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccC---CceEEEEEEeCCCCc----cchhh---ccce---EEeccc----cc---
Confidence 5888887654 89999999999999988 778877654222110 00000 0000 000000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--cc----ccccccCCEE
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--HP----TWFHKLVTRC 298 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~~----~~~~~~~d~v 298 (536)
.. ........+.+++++++||+||++.+....+ ..+.+.. ...+|++...++.... .. ++..+.++.+
T Consensus 61 -~~--~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~-~~l~~~~--~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 134 (360)
T cd04951 61 -PL--SFLLALWKLRKILRQFKPDVVHAHMFHANIF-ARLLRLF--LPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLT 134 (360)
T ss_pred -ch--hhHHHHHHHHHHHHhcCCCEEEEcccchHHH-HHHHHhh--CCCCcEEEEeeccCchhHHHHHHHHHHhhccCce
Confidence 00 1112234667788999999999987543322 2222322 2236766555544211 11 2234556778
Q ss_pred EEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCC-CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHh
Q 036427 299 YCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPV-RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 299 i~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l 376 (536)
+++++...+.+.+.+ +++.++.+++|+++...+.+. .....+++.++++++.++++++|+....++...+++++.+..
T Consensus 135 ~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 135 TNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred EEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 888999999888765 677899999999987665433 224457778888888888888988877788888887776544
Q ss_pred hhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcE
Q 036427 377 YDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPI 449 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPV 449 (536)
. ..++++++ ++|.++ ++.+.+++.+...+|.++|+.+++.++|+.||++++|| | |++++|||++|+||
T Consensus 215 ~----~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~Pv 289 (360)
T cd04951 215 S----DYLDIKLL-IAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPV 289 (360)
T ss_pred h----hCCCeEEE-EEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCE
Confidence 3 23567654 456654 34555666677789999999999999999999999998 3 89999999999999
Q ss_pred EEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 450 ILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
|+++.++..+. +.+.|......|+++++++|.++++.+++.++.++.+.....+.++++.+++.+.++++
T Consensus 290 I~~~~~~~~e~-----i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 290 VATDAGGVREV-----VGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred EEecCCChhhE-----ecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 99986554442 33333333335999999999999953677778887774445677999999999998875
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-24 Score=230.56 Aligned_cols=343 Identities=15% Similarity=0.128 Sum_probs=220.2
Q ss_pred chHHHHHHHHHHHHHhccCCce--EEEEeeccccc----CCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhh
Q 036427 156 GGHRASAEAIKAAFHEKFGNEY--QVFVTDLWSDH----TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAA 229 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~--eV~v~~~~~~~----~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 229 (536)
||...++..|+++|.++ |+ +|.|++..... ..+... ... .....++.+..... . ..........
T Consensus 26 GG~~~~v~~La~~L~~~---G~~~~V~v~t~~~~~~~~~~~~~~~-~~~----~~~gv~v~r~~~~~-~-~~~~~~~~~~ 95 (439)
T TIGR02472 26 GGQTKYVLELARALARR---SEVEQVDLVTRLIKDAKVSPDYAQP-IER----IAPGARIVRLPFGP-R-RYLRKELLWP 95 (439)
T ss_pred CCcchHHHHHHHHHHhC---CCCcEEEEEeccccCcCCCCccCCC-eeE----eCCCcEEEEecCCC-C-CCcChhhhhh
Confidence 79999999999999998 54 78776542211 011000 000 00111111111100 0 0000000011
Q ss_pred hhHHHHHHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--------------------
Q 036427 230 TSTFIAREVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------------- 287 (536)
Q Consensus 230 ~~~~~~~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------------- 287 (536)
....+...+.+++++. +||+||++......+...+++..+ +|++...|+.....
T Consensus 96 ~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~----~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (439)
T TIGR02472 96 YLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLG----VPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNI 171 (439)
T ss_pred hHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhC----CCEEEecccccchhhhhcccCCCChhhhhhhcch
Confidence 1123445677777754 699999987543322333344444 78876665432100
Q ss_pred ------cccccccCCEEEEcCHHHHHH-HHHh-CCCCCCEEEeCCCCCCCCCCCCCch---HH---HHHHcCCCCCCCEE
Q 036427 288 ------PTWFHKLVTRCYCPTADVAKR-AMKA-GLQASQIKVYGLPVRPSFVKPVRPK---VE---LRRELGMDEDLPAV 353 (536)
Q Consensus 288 ------~~~~~~~~d~vi~~S~~~~~~-l~~~-g~~~~ki~vignpv~~~~~~~~~~~---~~---~r~~lgi~~~~~~i 353 (536)
.++..+.+|.++++++..... +..+ +++++++.+++|+++.+.+.+..+. .. .++.++..++.+++
T Consensus 172 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (439)
T TIGR02472 172 SRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPI 251 (439)
T ss_pred HHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEE
Confidence 013456789999988765443 3333 6788899999999998876543211 11 22345566677888
Q ss_pred EEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH--------------HHHHHHcCCCCCCEEEecCh--
Q 036427 354 LLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK--------------LANKLLSTDWKIPVQVKGFV-- 417 (536)
Q Consensus 354 l~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~--------------l~~~l~~~~~~~~V~~~G~v-- 417 (536)
+++|+....|+...+++++..... . .....+++++|.+++ +.+.....++..+|+|.|++
T Consensus 252 ~~vGrl~~~Kg~~~li~A~~~l~~-~---~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~ 327 (439)
T TIGR02472 252 LAISRPDRRKNIPSLVEAYGRSPK-L---QEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRP 327 (439)
T ss_pred EEEcCCcccCCHHHHHHHHHhChh-h---hhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCH
Confidence 899988888888888888764211 0 112334445676531 11223455678899999975
Q ss_pred hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHH
Q 036427 418 SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~ 486 (536)
+++.++|+.| |++|+|| | |++++|||+||+|||+++.++..| ++++ ..|.+++ |+++|+++|.
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~e------iv~~~~~G~lv~~~d~~~la~~i~ 401 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRD------IIANCRNGLLVDVLDLEAIASALE 401 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHH------HhcCCCcEEEeCCCCHHHHHHHHH
Confidence 5899999987 9999998 4 899999999999999999755443 5554 4566664 8999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHH
Q 036427 487 QWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELV 523 (536)
Q Consensus 487 ~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~ 523 (536)
++++ +++.+++|++++++.+ +.++|+++++.+++++
T Consensus 402 ~ll~-~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 402 DALS-DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999 9999999999999875 5689999999999876
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-24 Score=226.40 Aligned_cols=357 Identities=15% Similarity=0.121 Sum_probs=231.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCC-----cc--hhHHHH------HHhhcc-cc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFN-----QL--PRSYNF------LVKHGP-LW 210 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~-----~~--~~~y~~------~~~~~~-l~ 210 (536)
|||.+++.....=.++-...=+.+|.++ |++|.+++.........-. .+ ...|.. +..... ..
T Consensus 1 m~ia~~~~~~P~~setFi~~ei~~l~~~---G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (406)
T PRK15427 1 MKVGFFLLKFPLSSETFVLNQITAFIDM---GFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRAS 77 (406)
T ss_pred CeEEEEeccCCccchhhHHHHHHHHHHc---CceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhh
Confidence 7999999876656666677777889998 8889888654332111000 00 000100 000000 00
Q ss_pred -cee-ecCCC--cc-cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CC
Q 036427 211 -KMT-YYGTA--PR-VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DL 283 (536)
Q Consensus 211 -~~~-~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~ 283 (536)
... +.... .. ...+..........+-.+.+.+++.+||+||+|....... ...++..+..+ .|.+++.| |.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~-~~~~~~~~~~~-~~~~~t~Hg~d~ 155 (406)
T PRK15427 78 QTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVT-AAKLRELGVLR-GKIATIFHGIDI 155 (406)
T ss_pred hHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHH-HHHHHHhCCCC-CCeEEEEccccc
Confidence 000 00000 00 0000000111122223445667788999999987643222 22233333322 23344433 33
Q ss_pred CCc--------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEE
Q 036427 284 STC--------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLL 355 (536)
Q Consensus 284 ~~~--------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~ 355 (536)
... ...+..+.+|.++++|+..++.+.+.|++++++.+++|+++.+.+.+.... ...+...+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~--------~~~~~~~il~ 227 (406)
T PRK15427 156 SSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVK--------APATPLEIIS 227 (406)
T ss_pred ccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCCCCCHHHcCCCccc--------cCCCCeEEEE
Confidence 210 112345789999999999999998888888999999999998766532211 1123446788
Q ss_pred ecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeE
Q 036427 356 MGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCI 430 (536)
Q Consensus 356 ~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~ 430 (536)
+|+....|+...+++++..... ..+++++ +++|.++ ++++.++++++.++|+|.|++ +++.++|+.||++
T Consensus 228 vGrl~~~Kg~~~ll~a~~~l~~----~~~~~~l-~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~ 302 (406)
T PRK15427 228 VARLTEKKGLHVAIEACRQLKE----QGVAFRY-RILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVF 302 (406)
T ss_pred EeCcchhcCHHHHHHHHHHHHh----hCCCEEE-EEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEE
Confidence 8888777888888877765432 2456665 4567765 455667777888899999998 4899999999999
Q ss_pred EECC---------C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHH
Q 036427 431 ITKA---------G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELK 497 (536)
Q Consensus 431 V~~s---------G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~ 497 (536)
|+|| | |++++|||++|+|||+++.++..| ++++ ..|.+++ |+++++++|.+++++|++.++
T Consensus 303 v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E------~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~ 376 (406)
T PRK15427 303 LLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPE------LVEADKSGWLVPENDAQALAQRLAAFSQLDTDELA 376 (406)
T ss_pred EECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchh------hhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHH
Confidence 9986 3 789999999999999998655443 5554 4676764 899999999999976789999
Q ss_pred HHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 498 AMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 498 ~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
+|+++|++.+ ..+.++++++.+.+++++
T Consensus 377 ~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 377 PVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999876 558999999999998865
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=226.86 Aligned_cols=340 Identities=12% Similarity=0.057 Sum_probs=226.0
Q ss_pred eEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++. ...||..+.+..|+++|.++ ||+|.|.+...+.. ...... ...-+...........
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~---G~~V~v~~~~~~~~-~~~~~~-------~~~i~v~~~p~~~~~~--- 66 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKR---GHKVVVITHAYGNR-VGIRYL-------TNGLKVYYLPFVVFYN--- 66 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHc---CCeeEEEeccCCcC-CCcccc-------cCceeEEEecceeccC---
Confidence 7888864 23489999999999999998 78887775422110 000000 0000011100000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCCc----------cccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLSTC----------HPTW 290 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~ 290 (536)
..... ........+.+.+++.+||+||++.+..... .+.+++..+ +|+++..|+.... ..++
T Consensus 67 ~~~~~--~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~----~~~v~t~h~~~~~~~~~~~~~~~~~~~ 140 (398)
T cd03796 67 QSTLP--TFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMG----LKTVFTDHSLFGFADASSIHTNKLLRF 140 (398)
T ss_pred Ccccc--chhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcC----CcEEEEecccccccchhhHHhhHHHHH
Confidence 00000 1112234666778889999999998653321 122233333 7887666653211 1133
Q ss_pred ccccCCEEEEcCHHHHHHH-HHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRA-MKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l-~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
..+.+|.++++|+...+.+ .+.+++++++.+++|+++...+.+.... .+++.++++++|+....|+...++
T Consensus 141 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~--------~~~~~~~i~~~grl~~~Kg~~~li 212 (398)
T cd03796 141 SLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK--------RDNDKITIVVISRLVYRKGIDLLV 212 (398)
T ss_pred hhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc--------CCCCceEEEEEeccchhcCHHHHH
Confidence 4678999999999988765 3457778899999999987765443211 234566788888877778877777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
+++....+ ..+++++ +++|.++ .+.+.+++.++.++|+|+|++ +++..+|+.||++++|| | |.+++
T Consensus 213 ~a~~~l~~----~~~~~~l-~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~ 287 (398)
T cd03796 213 GIIPEICK----KHPNVRF-IIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIV 287 (398)
T ss_pred HHHHHHHh----hCCCEEE-EEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHH
Confidence 77754332 2467765 4556664 455666777888899999997 58999999999999998 3 89999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQD 518 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~ 518 (536)
|||+||+|||+++.++..| +++++.+.++ .|+++++++|.++++ ++.....+++++++. .+.+++++++++
T Consensus 288 EAma~G~PVI~s~~gg~~e------~i~~~~~~~~~~~~~~l~~~l~~~l~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 360 (398)
T cd03796 288 EAASCGLLVVSTRVGGIPE------VLPPDMILLAEPDVESIVRKLEEAIS-ILRTGKHDPWSFHNRVKKMYSWEDVAKR 360 (398)
T ss_pred HHHHcCCCEEECCCCCchh------heeCCceeecCCCHHHHHHHHHHHHh-ChhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence 9999999999999765444 5555555544 489999999999999 766665677777664 566899999999
Q ss_pred HHHHHhh
Q 036427 519 LHELVRQ 525 (536)
Q Consensus 519 i~~l~~~ 525 (536)
+.+++++
T Consensus 361 ~~~~y~~ 367 (398)
T cd03796 361 TEKVYDR 367 (398)
T ss_pred HHHHHHH
Confidence 9887765
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-23 Score=214.01 Aligned_cols=340 Identities=18% Similarity=0.164 Sum_probs=234.4
Q ss_pred eEEEEeCCCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++..++ ||..+.+..|++.|.+. ++++.++....... .. ..+......... ..... .
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~---~~~v~~~~~~~~~~------~~---~~~~~~~i~v~~-~~~~~-~---- 62 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRD---RFEHVVISLTDRGE------LG---EELEEAGVPVYC-LGKRP-G---- 62 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhc---cceEEEEecCcchh------hh---HHHHhcCCeEEE-Eeccc-c----
Confidence 6888876532 89999999999999887 67776654322110 00 001111100000 00000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-----------cccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-----------PTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-----------~~~~~~ 293 (536)
........++.+++++.+||+|+++............+..+ ++|++...++..... ..++.+
T Consensus 63 ----~~~~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T cd03807 63 ----RPDPGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAG---VPPVIWGIRHSDLDLGKKSTRLVARLRRLLSS 135 (365)
T ss_pred ----cccHHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcC---CCcEEEEecCCcccccchhHhHHHHHHHHhcc
Confidence 01223445677889999999999986543322222223212 367776666543221 133456
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC-CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV-RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
.++.+++.|+...+.+.+.+++..++.+++|+++...+.+. ......+++++++++.+.++++|+....++...+++++
T Consensus 136 ~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 136 FIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 78888999999999998888888899999999987655433 23445667888888888888888877778877777777
Q ss_pred HHHhhhcccCCCCcEEEEEecCCH---HHHHHHH-cCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICGRNK---KLANKLL-STDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMI 444 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~-~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma 444 (536)
..... ..+++++ +++|.+. ...+... +.+...++.+.|..+++.++|+.||++++|+ | |++++|||+
T Consensus 216 ~~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a 290 (365)
T cd03807 216 ALLLK----KFPNARL-LLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMA 290 (365)
T ss_pred HHHHH----hCCCeEE-EEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHHh
Confidence 55433 2456765 4456654 2233333 5567788999999999999999999999998 3 899999999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVFRIVQDLHE 521 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~~i~~~i~~ 521 (536)
||+|||+++.++..+ +... .|.++ .|+++++++|..+++ +++.++++++++++.+. .++++++++.+.+
T Consensus 291 ~g~PvI~~~~~~~~e------~~~~-~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 291 CGLPVVATDVGDNAE------LVGD-TGFLVPPGDPEALAEAIEALLA-DPALRQALGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred cCCCEEEcCCCChHH------Hhhc-CCEEeCCCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999988654333 4444 55555 489999999999999 99999999999999875 4899999999988
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
++
T Consensus 363 ~y 364 (365)
T cd03807 363 LY 364 (365)
T ss_pred Hh
Confidence 75
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-23 Score=217.59 Aligned_cols=322 Identities=17% Similarity=0.146 Sum_probs=219.6
Q ss_pred eEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccccc
Q 036427 146 KVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~ 223 (536)
||++++.. ..||....+..++++|.+. +++|.++....... ..... ....+ ..+.... ...
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~---~~~v~~i~~~~~~~-----~~~~~---~~~~~~~~~~~~~---~~~--- 63 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRS---KIQFDFLVTSKEEG-----DYDDE---IEKLGGKIYYIPA---RKK--- 63 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCcc---ceEEEEEEeCCCCc-----chHHH---HHHcCCeEEEecC---CCc---
Confidence 78888865 3489999999999999977 78887765432211 01000 11111 1111000 000
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcc------------ccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCH------------PTW 290 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~------------~~~ 290 (536)
........+.+.+++.+||+||++.+....++..+.+..+ .|. +...++..... ...
T Consensus 64 ------~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (358)
T cd03812 64 ------NPLKYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAG----VKVRIAHSHNTSDSHDKKKKILKYKVLRKL 133 (358)
T ss_pred ------cHHHHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCC----CCeEEEEeccccccccccchhhHHHHHHHH
Confidence 1112334566678899999999988764444444444433 443 33333321110 123
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
+.+.++.++++++...+.+... .++.++.+++|+++...+.+.....+.++..+...+.+.++++|+....|+...+++
T Consensus 134 ~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~ 212 (358)
T cd03812 134 INRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIE 212 (358)
T ss_pred HHhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHH
Confidence 3567899999999999988766 567889999999998766543322233556677777888888988877788877777
Q ss_pred HHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHH
Q 036427 371 ALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAM 443 (536)
Q Consensus 371 al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAm 443 (536)
++..... ..+++++ +++|.++ .+.+.+++.++.++|.+.|+.+++.++|+.||++|+|| | |++++|||
T Consensus 213 a~~~l~~----~~~~~~l-~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAm 287 (358)
T cd03812 213 IFAELLK----KNPNAKL-LLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQ 287 (358)
T ss_pred HHHHHHH----hCCCeEE-EEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHH
Confidence 7765543 2466765 4557665 34555666778889999999889999999999999998 4 89999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA 507 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a 507 (536)
++|+|||+++.++..+ +++++.+++.. ++++++++|.++++ +++.++.+...+....
T Consensus 288 a~G~PvI~s~~~~~~~------~i~~~~~~~~~~~~~~~~a~~i~~l~~-~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 288 ASGLPCILSDTITKEV------DLTDLVKFLSLDESPEIWAEEILKLKS-EDRRERSSESIKKKGL 346 (358)
T ss_pred HhCCCEEEEcCCchhh------hhccCccEEeCCCCHHHHHHHHHHHHh-Ccchhhhhhhhhhccc
Confidence 9999999999766444 44456666553 57999999999999 9999988887776643
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-24 Score=223.29 Aligned_cols=334 Identities=15% Similarity=0.167 Sum_probs=214.1
Q ss_pred ceEEEEeCCC--CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 145 KKVLILMSDT--GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++++... -||.++....++++|.+. |+|++++++....... ..+ ......... ... ...
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~-~~g~~v~v~~~~~~~~--------~~~--~~~~~~~~~--~~~--~~~- 64 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEES-KINCEMFFFCRNDKMD--------KAW--LKEIKYAQS--FSN--IKL- 64 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhc-CcceeEEEEecCCCCC--------hHH--HHhcchhcc--ccc--chh-
Confidence 8999997542 289999999999999997 7789998765422100 000 000000000 000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-ccc-ccccccCCEEE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-CHP-TWFHKLVTRCY 299 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-~~~-~~~~~~~d~vi 299 (536)
.. ........++.+++++.+||+||++.+........+.+..+. +.+++.+.+. ... ... ....+.+|.++
T Consensus 65 ---~~-~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~~~~~~~~~~~~~~~d~~i 138 (359)
T PRK09922 65 ---SF-LRRAKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGK--QFKIFSWPHFSLDHKKHAECKKITCADYHL 138 (359)
T ss_pred ---hh-hcccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCC--CCeEEEEecCcccccchhhhhhhhcCCEEE
Confidence 00 001122356778999999999999876543222222233332 2344433321 110 111 11136889999
Q ss_pred EcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC--CCCcHHHHHHHHHHHhh
Q 036427 300 CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE--GMGPIEATARALGNALY 377 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~--g~k~~~~~l~al~~~l~ 377 (536)
++|+..++.+.+++++++++.+++||++.+.+....+. ..+.+.++++|+.. +.++...+++++...
T Consensus 139 ~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~~~---------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~-- 207 (359)
T PRK09922 139 AISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPPPE---------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQT-- 207 (359)
T ss_pred EcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCCcc---------cCCCcEEEEEEEEecccCcCHHHHHHHHHhh--
Confidence 99999999999888888899999999985432211111 12356788888753 457777777766542
Q ss_pred hcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh----hHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 378 DENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS----KMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~----~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
.+++++ +++|.++ ++.+..++.++.++|+|.|+++ ++.++|+.||++|+|| | |++++|||+||
T Consensus 208 -----~~~~~l-~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G 281 (359)
T PRK09922 208 -----TGEWQL-HIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG 281 (359)
T ss_pred -----CCCeEE-EEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC
Confidence 134655 4556664 4555666777888999999974 5677788899999998 4 99999999999
Q ss_pred CcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHH--HHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKID--ELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~--~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+|||++++.++. ..++.+ ..|.+++ |+++++++|.++++ +++ ....++++++++..+....++++.+..
T Consensus 282 ~Pvv~s~~~~g~-----~eiv~~~~~G~lv~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 282 IPCISSDCMSGP-----RDIIKPGLNGELYTPGNIDEFVGKLNKVIS-GEVKYQHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred CCEEEeCCCCCh-----HHHccCCCceEEECCCCHHHHHHHHHHHHh-CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999833322 225554 4566664 89999999999999 887 456667777777776666666666655
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
+.
T Consensus 356 ~~ 357 (359)
T PRK09922 356 KL 357 (359)
T ss_pred Hh
Confidence 43
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-24 Score=214.98 Aligned_cols=326 Identities=18% Similarity=0.186 Sum_probs=222.6
Q ss_pred eEEEEeCCCC--chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 146 KVLILMSDTG--GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~~G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||+|++.+.+ ||..+.+..++++|.+. |++|.++........ ........ +. ....... . .
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~--~~~~~~~~----~~---~~~~~~~-~-~--- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEK---GHEVTIISLDKGEPP--FYELDPKI----KV---IDLGDKR-D-S--- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhC---CCeEEEEecCCCCCC--ccccCCcc----ce---eeccccc-c-c---
Confidence 6899886644 89999999999999987 788877755333200 00000000 00 0000000 0 0
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc---------ccccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH---------PTWFHKL 294 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~---------~~~~~~~ 294 (536)
...........+.+++++.+||+|+++.+... .+......+ .+|.+...++..... .++..+.
T Consensus 64 ---~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~--~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (348)
T cd03820 64 ---KLLARFKKLRRLRKLLKNNKPDVVISFLTSLL--TFLASLGLK---IVKLIVSEHNSPDAYKKRLRRLLLRRLLYRR 135 (348)
T ss_pred ---chhccccchHHHHHhhcccCCCEEEEcCchHH--HHHHHHhhc---cccEEEecCCCccchhhhhHHHHHHHHHHhc
Confidence 00011223356777889999999999987621 122222222 136665555432111 2344678
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+|.+++.|+..+ ......+..++.+++|+++....... ...+.+.++++|+....++...+++++.+
T Consensus 136 ~d~ii~~s~~~~--~~~~~~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 136 ADAVVVLTEEDR--ALYYKKFNKNVVVIPNPLPFPPEEPS-----------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred CCEEEEeCHHHH--HHhhccCCCCeEEecCCcChhhcccc-----------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 999999999987 22334567889999999987654432 12456678888887777777777766654
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
... ..+++++ +++|.++ .+.+.+++.+...+|.+.|+.+++.++|+.||++|.|+ | |++++|||++|+
T Consensus 203 l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~ 277 (348)
T cd03820 203 IAK----KHPDWKL-RIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGL 277 (348)
T ss_pred HHh----cCCCeEE-EEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcCC
Confidence 432 2466665 4456554 34445666777889999999889999999999999998 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLH 520 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~ 520 (536)
|||+++..+..+ .+++.+ .|.+++ |+++++++|.++++ +++.+++|++++++..+.++++++++.+.
T Consensus 278 Pvi~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 278 PVISFDCPTGPS-----EIIEDGVNGLLVPNGDVEALAEALLRLME-DEELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred CEEEecCCCchH-----hhhccCcceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 999998654433 366666 777775 78999999999999 99999999999998899999999998774
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-23 Score=216.76 Aligned_cols=318 Identities=17% Similarity=0.155 Sum_probs=217.3
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCcccccchhhhhhhHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIHQSNFAATSTFI 234 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (536)
||..+.+..|+++|.+. |++|.++..... .... ....+ ......... .. .......
T Consensus 10 gG~e~~~~~l~~~L~~~---g~~v~v~~~~~~--------~~~~---~~~~~~~~~~~~~~~---~~------~~~~~~~ 66 (355)
T cd03819 10 GGVERGTLELARALVER---GHRSLVASAGGR--------LVAE---LEAEGSRHIKLPFIS---KN------PLRILLN 66 (355)
T ss_pred CcHHHHHHHHHHHHHHc---CCEEEEEcCCCc--------hHHH---HHhcCCeEEEccccc---cc------hhhhHHH
Confidence 89999999999999998 888877753211 0000 11111 011100000 00 0012223
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--cccccccCCEEEEcCHHHHHHHHH-
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH--PTWFHKLVTRCYCPTADVAKRAMK- 311 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--~~~~~~~~d~vi~~S~~~~~~l~~- 311 (536)
...+.+++++.+||+||+++.........+.+.. ++|++...|+..... ..++.+.+|.++++|+...+.+.+
T Consensus 67 ~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~ 142 (355)
T cd03819 67 VARLRRLIREEKVDIVHARSRAPAWSAYLAARRT----RPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIREN 142 (355)
T ss_pred HHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhc----CCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHh
Confidence 4567788999999999998765433333333333 389887777764222 234456899999999999999884
Q ss_pred hCCCCCCEEEeCCCCCCCCCCCCCc-h---HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 312 AGLQASQIKVYGLPVRPSFVKPVRP-K---VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 312 ~g~~~~ki~vignpv~~~~~~~~~~-~---~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
++++..++.+++|+++...+.+... . ...++.++++++.++++++|+....++...+++++..... ..++++
T Consensus 143 ~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~----~~~~~~ 218 (355)
T cd03819 143 YGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK----DDPDVH 218 (355)
T ss_pred cCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh----cCCCeE
Confidence 6788889999999998877654321 1 1256677777777888888887767777777776654432 135566
Q ss_pred EEEEecCCH---HH----HHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEEeccC
Q 036427 388 VLVICGRNK---KL----ANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 388 ~lvi~G~~~---~l----~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~~~~~ 455 (536)
+ +++|.+. .+ .+.+++.+..++|++.|+.+++.++|+.||++++|| | |++++|||++|+|||+++.+
T Consensus 219 l-~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 219 L-LIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred E-EEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 5 4556543 22 234455567788999999999999999999999998 2 89999999999999999865
Q ss_pred CccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCc
Q 036427 456 AGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPD 510 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~ 510 (536)
+..+ .+.+...|.++. |+++++++|..++..+++.+++|+++|++.+.++
T Consensus 298 ~~~e-----~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 298 GARE-----TVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred CcHH-----HHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 4333 233444677664 8999999996555438999999999999987653
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-23 Score=214.04 Aligned_cols=342 Identities=17% Similarity=0.152 Sum_probs=223.2
Q ss_pred eEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||||++.. .+||+.+.+..|+++|.++ |++|.++.................+ ... ..+.. ..... ..
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~-~~ 71 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKR---GHEVAVLTAGEDPPRQDKEVIGVVV---YGR-PIDEV-LRSAL-PR 71 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhc---CCceEEEeCCCCCCCccccccccee---ecc-ccccc-cCCCc-hh
Confidence 68888744 2479999999999999988 7888776543321111000000000 000 00000 00000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCcc--cccccccCCEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTCH--PTWFHKLVTRC 298 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~~--~~~~~~~~d~v 298 (536)
................+.+++++.+||+|+++.+...... +..++..+ +|++...+|+.... ..+.....|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~----~~~i~~~hd~~~~~~~~~~~~~~~d~i 147 (359)
T cd03823 72 DLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRG----IPIVLTLHDYWLICPRQGLFKKGGDAV 147 (359)
T ss_pred hhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcC----CCEEEEEeeeeeecchhhhhccCCCEE
Confidence 0001111123334567788899999999999886433222 22233333 88887777754221 22334445999
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+++|+...+.+.+.+.++.++.+++|+++...+.+... +.+.+.++++++|+....++...+++++.+..
T Consensus 148 i~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~--------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~-- 217 (359)
T cd03823 148 IAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR--------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLP-- 217 (359)
T ss_pred EEeCHHHHHHHHHcCCCccceEEecCCcChhhcccccc--------CCCCCceEEEEEecCccccCHHHHHHHHHHHH--
Confidence 99999999999888776678999999999876654321 23355667778888777777776666665432
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEE
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIIL 451 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~ 451 (536)
.+++++ +++|.+..............+|++.|++ +++.++|+.||++|+|+ | |++++|||++|+|||+
T Consensus 218 ----~~~~~l-~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~ 292 (359)
T cd03823 218 ----RGDIEL-VIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIA 292 (359)
T ss_pred ----hcCcEE-EEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEE
Confidence 145665 5557665222221111456789999998 69999999999999986 3 8899999999999999
Q ss_pred eccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 452 NDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 452 ~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++.++..+ .+.+.+.|.++. |+++++++|.++++ +++.+++|++++++.... +.+++.+.++++
T Consensus 293 ~~~~~~~e-----~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 293 SDIGGMAE-----LVRDGVNGLLFPPGDAEDLAAALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred CCCCCHHH-----HhcCCCcEEEECCCCHHHHHHHHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 98654333 234444677664 78999999999999 999999999999887655 778888887764
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-24 Score=216.97 Aligned_cols=335 Identities=19% Similarity=0.213 Sum_probs=222.3
Q ss_pred eEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++... .||+..++..|+++|.++ ||+|.++............. . ... +......+. ...
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~---~----~~~-~~~~~~~~~-~~~-- 66 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRAR---GHEVLVIAPGPFRESEGPAR---V----VPV-PSVPLPGYP-EIR-- 66 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHC---CCEEEEEeCCchhhccCCCC---c----eee-cccccCccc-ceE--
Confidence 688887432 279999999999999998 77887765432211000000 0 000 000000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCCc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLSTC--------------- 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~--------------- 286 (536)
........+.+.+++.+||+||++.+..... ...+.++. ++|++...++....
T Consensus 67 -------~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 135 (364)
T cd03814 67 -------LALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRL----GIPVVTSYHTDFPEYLRYYGLGPLSWLAW 135 (364)
T ss_pred -------ecccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHc----CCCEEEEEecChHHHhhhcccchHhHhhH
Confidence 0111223566778899999999886544322 22333333 38887655543210
Q ss_pred -ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 287 -HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 287 -~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
..+++.+.+|.++++|+...+.+...+ ..++.+++++++...+.+.......+++++ ..+.+.++++|+....++.
T Consensus 136 ~~~~~~~~~~d~i~~~s~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~k~~ 212 (364)
T cd03814 136 AYLRWFHNRADRVLVPSPSLADELRARG--FRRVRLWPRGVDTELFHPRRRDEALRARLG-PPDRPVLLYVGRLAPEKNL 212 (364)
T ss_pred HHHHHHHHhCCEEEeCCHHHHHHHhccC--CCceeecCCCccccccCcccccHHHHHHhC-CCCCeEEEEEeccccccCH
Confidence 113456788999999999998665544 356889999998877665443444555555 4455677777776666776
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTI 439 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tl 439 (536)
..+++++.+... . +++++ +++|.++.. +.++ ....+|.+.|++ +++.++|+.||++++|+ | |+++
T Consensus 213 ~~~i~~~~~l~~----~-~~~~l-~i~G~~~~~-~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~ 283 (364)
T cd03814 213 EALLDADLPLRR----R-PPVRL-VIVGDGPAR-ARLE--ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVV 283 (364)
T ss_pred HHHHHHHHHhhh----c-CCceE-EEEeCCchH-HHHh--ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHH
Confidence 666665544321 2 45654 556766522 2233 345689999976 58999999999999997 3 8999
Q ss_pred HHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 440 AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+|||+||+|||+++.++..+ .+.+.+.|.++. +.++++++|.++++ +++.+++|++++++.+..++++++++
T Consensus 284 lEa~a~g~PvI~~~~~~~~~-----~i~~~~~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (364)
T cd03814 284 LEAMASGLPVVAPDAGGPAD-----IVTDGENGLLVEPGDAEAFAAALAALLA-DPELRRRMAARARAEAERRSWEAFLD 357 (364)
T ss_pred HHHHHcCCCEEEcCCCCchh-----hhcCCcceEEcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 99999999999998655433 244457777764 78889999999999 99999999999999998899999999
Q ss_pred HHHHHH
Q 036427 518 DLHELV 523 (536)
Q Consensus 518 ~i~~l~ 523 (536)
.+.+++
T Consensus 358 ~~~~~~ 363 (364)
T cd03814 358 NLLEAY 363 (364)
T ss_pred HHHHhh
Confidence 998875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=219.77 Aligned_cols=339 Identities=14% Similarity=0.100 Sum_probs=222.5
Q ss_pred ceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 145 KKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 145 mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|||++++.. ..||....+..|+++|.++ ++++|++..... ....++. ... +.....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~--~~v~v~~~~~~~----~~~~~~~-----------~~~---~~~~~~ 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL--MDVDVRCFGDQR----FDSEGLT-----------VKG---YRPWSE 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh--cCeeEEcCCCch----hcCCCeE-----------EEE---ecChhh
Confidence 799999743 2378899999999999886 366666543211 0000100 000 000000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--------------
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC-------------- 286 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~-------------- 286 (536)
... ... ........+.......+||+||++.......+..+.+..+ +|++...|+....
T Consensus 61 -~~~-~~~-~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~ 133 (388)
T TIGR02149 61 -LKE-ANK-ALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYD----KPLVVTAHSLEPLRPWKEEQLGGGYKL 133 (388)
T ss_pred -ccc-hhh-hhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcC----CCEEEEeecccccccccccccccchhH
Confidence 000 000 0000011111122335799999987544322232233333 8888777665311
Q ss_pred ---ccccccccCCEEEEcCHHHHHHHHHh--CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 287 ---HPTWFHKLVTRCYCPTADVAKRAMKA--GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 287 ---~~~~~~~~~d~vi~~S~~~~~~l~~~--g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
..++..+.+|.++++|+..++.+.+. +++..++.+++|+++...+.+. .....+++++++++.++++++|+...
T Consensus 134 ~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Grl~~ 212 (388)
T TIGR02149 134 SSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRYGIDRSRPYILFVGRITR 212 (388)
T ss_pred HHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC-chHHHHHHhCCCCCceEEEEEccccc
Confidence 01233567899999999999988775 5667889999999998776543 34567888999888888999988877
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC--HHHHHH----HHcCCC-CCCEEEe-cCh--hhHHHHHhhcCeEE
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRN--KKLANK----LLSTDW-KIPVQVK-GFV--SKMEEAMGACDCII 431 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~--~~l~~~----l~~~~~-~~~V~~~-G~v--~~l~~ll~~aDv~V 431 (536)
.|+...+++++.+. . ++.++++++|.. +++.+. +.+... ..++.+. |++ +++.++|+.||++|
T Consensus 213 ~Kg~~~li~a~~~l-~------~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v 285 (388)
T TIGR02149 213 QKGVPHLLDAVHYI-P------KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFV 285 (388)
T ss_pred ccCHHHHHHHHHHH-h------hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEE
Confidence 78888777776543 1 345555543322 223233 333332 2357765 455 58999999999999
Q ss_pred ECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CH------HHHHHHHHHHhCCCHHHHHH
Q 036427 432 TKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SP------KEIANMVSQWFGPKIDELKA 498 (536)
Q Consensus 432 ~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~------~~La~~I~~ll~~d~~~~~~ 498 (536)
+|| + |.+++|||++|+|||+++.++..| +++. ..|.+++ |+ ++++++|.++++ +++.+++
T Consensus 286 ~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e------~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~~~ 358 (388)
T TIGR02149 286 CPSIYEPLGIVNLEAMACGTPVVASATGGIPE------VVVDGETGFLVPPDNSDADGFQAELAKAINILLA-DPELAKK 358 (388)
T ss_pred eCCccCCCChHHHHHHHcCCCEEEeCCCCHHH------HhhCCCceEEcCCCCCcccchHHHHHHHHHHHHh-CHHHHHH
Confidence 997 3 899999999999999999654333 4444 4577764 56 899999999999 9999999
Q ss_pred HHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 499 MSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 499 m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
|++++++.+ +.++|+.+++.+.+++++
T Consensus 359 ~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 359 MGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999876 568999999999988764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-23 Score=234.06 Aligned_cols=264 Identities=13% Similarity=0.042 Sum_probs=188.9
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc-------------------c--c------ccccccCCEE
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC-------------------H--P------TWFHKLVTRC 298 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~-------------------~--~------~~~~~~~d~v 298 (536)
.||+||+|......+.+.+.+..+ +|++...|.+... + . .+....+|.|
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~lg----VP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~V 385 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGALN----VPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIV 385 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhhC----CCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEE
Confidence 399999996433333333334344 8998666633110 0 0 2345788999
Q ss_pred EEcCHHHHHHHHH-hC-CC---------------------CCCEEEeCCCCCCCCCCCCCch------------------
Q 036427 299 YCPTADVAKRAMK-AG-LQ---------------------ASQIKVYGLPVRPSFVKPVRPK------------------ 337 (536)
Q Consensus 299 i~~S~~~~~~l~~-~g-~~---------------------~~ki~vignpv~~~~~~~~~~~------------------ 337 (536)
++.|+...+.+.. |+ ++ ..++.|||+++|...|.+....
T Consensus 386 IasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 386 ITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 9999988876433 21 12 2489999999998877653110
Q ss_pred --HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------------HHHHH
Q 036427 338 --VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--------------KLANK 401 (536)
Q Consensus 338 --~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------------~l~~~ 401 (536)
.+++ ++..++++++|+++|+....|++..+++++...... ...+++. +++|.++ ++.+.
T Consensus 466 ~~~~l~-r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l--~~~~nL~--LIiG~gdd~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 466 IWSEIM-RFFTNPRKPMILALARPDPKKNITTLVKAFGECRPL--RELANLT--LIMGNRDDIDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred hhHHHH-hhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhh--ccCCCEE--EEEecCchhhhhhccchHHHHHHHHH
Confidence 1222 334567788999999998889988888888654321 0123333 3446432 13344
Q ss_pred HHcCCCCCCEEEecCh--hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-C
Q 036427 402 LLSTDWKIPVQVKGFV--SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-G 470 (536)
Q Consensus 402 l~~~~~~~~V~~~G~v--~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g 470 (536)
++++++..+|.|+|++ +++.++|+.| |++|+|| | |++++||||||+|||+++.++..+ +++. .
T Consensus 541 i~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E------II~~g~ 614 (1050)
T TIGR02468 541 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRVLD 614 (1050)
T ss_pred HHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH------HhccCC
Confidence 5566888899999986 5899999988 6999998 3 899999999999999999655333 5544 4
Q ss_pred ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 471 CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 471 ~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.|++++ |+++|+++|..+++ +++.+++|++++++.+..++|+.+++.+++.+..
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 577765 89999999999999 9999999999999998889999999999887764
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-23 Score=217.89 Aligned_cols=339 Identities=18% Similarity=0.164 Sum_probs=223.1
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||+...+..|+++|.+. ||+|.|++............... ......... ... ................
T Consensus 21 GG~~~~~~~l~~~L~~~---g~~V~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 88 (398)
T cd03800 21 GGQNVYVLELARALARL---GHEVDIFTRRIDDALPPIVELAP-------GVRVVRVPA-GPA-EYLPKEELWPYLDEFA 88 (398)
T ss_pred CceeehHHHHHHHHhcc---CceEEEEEecCCcccCCcccccc-------ceEEEeccc-ccc-cCCChhhcchhHHHHH
Confidence 79999999999999998 78887765322211100000000 000000000 000 0000000011112234
Q ss_pred HHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc------------------cccccccC
Q 036427 236 REVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------------PTWFHKLV 295 (536)
Q Consensus 236 ~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------------~~~~~~~~ 295 (536)
..+.+.+++. +||+||++..........+++..+ +|++...++..... .++..+.+
T Consensus 89 ~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 164 (398)
T cd03800 89 DDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLG----IPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAA 164 (398)
T ss_pred HHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcC----CceEEEeecccccCCcccccccccchhhhhhHHHHHHhhC
Confidence 4566777777 999999987554433333444443 78776655533110 02245679
Q ss_pred CEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 296 TRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 296 d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
|.++++|+...+.+.+.+ .+..++.+++|+++.+.+.+.......++.++.+.+.++++++|+....++...+++++..
T Consensus 165 d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~ 244 (398)
T cd03800 165 DRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAE 244 (398)
T ss_pred CEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHH
Confidence 999999999988887754 4455699999999987665543333335556667777888888887777777777777655
Q ss_pred HhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 375 ALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
... ..+++++++++|... ++.+..++.+...++.+.|++ +++..+|+.||++++|| | |.+++
T Consensus 245 l~~----~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~ 320 (398)
T cd03800 245 LPE----LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTAL 320 (398)
T ss_pred HHH----hCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHH
Confidence 432 245677655544321 112334555677899999997 48999999999999997 3 89999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
|||++|+|||+++..+..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+ +.++++.+++
T Consensus 321 Ea~a~G~Pvi~s~~~~~~e-----~i~~~~~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~ 394 (398)
T cd03800 321 EAMACGLPVVATAVGGPRD-----IVVDGVTGLLVDPRDPEALAAALRRLLT-DPALRRRLSRAGLRRARARYTWERVAA 394 (398)
T ss_pred HHHhcCCCEEECCCCCHHH-----HccCCCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999998654333 244445677775 89999999999999 9999999999999988 7789999888
Q ss_pred HHH
Q 036427 518 DLH 520 (536)
Q Consensus 518 ~i~ 520 (536)
.+.
T Consensus 395 ~~~ 397 (398)
T cd03800 395 RLL 397 (398)
T ss_pred HHh
Confidence 765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-23 Score=215.96 Aligned_cols=312 Identities=18% Similarity=0.176 Sum_probs=218.7
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||||+++... .||+.+.+..++++|.+. ||+|.+......
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~---G~~v~v~~~~~~------------------------------------ 41 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAA---GVDSTMLVQEKK------------------------------------ 41 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhc---CCceeEEEeecc------------------------------------
Confidence 7999997653 389999999999999998 677766653211
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------------
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH---------------- 287 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~---------------- 287 (536)
.+.+.++..+||+||++......+.+..+.+.. .++|.+...||+....
T Consensus 42 -------------~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~--~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T cd03825 42 -------------ALISKIEIINADIVHLHWIHGGFLSIEDLSKLL--DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTEC 106 (365)
T ss_pred -------------hhhhChhcccCCEEEEEccccCccCHHHHHHHH--cCCCEEEEcccCcccccccCCccccccccccC
Confidence 112335678899999876332222222222221 1378887777642100
Q ss_pred --------------cc--------cccccCCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHc
Q 036427 288 --------------PT--------WFHKLVTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRREL 344 (536)
Q Consensus 288 --------------~~--------~~~~~~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~l 344 (536)
.. ++....+.++++|+...+.+.+.+ ++..++.+++|+++...+.+. .+...++.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~-~~~~~~~~~ 185 (365)
T cd03825 107 GNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPR-DKREARKRL 185 (365)
T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCC-cHHHHHHHh
Confidence 00 011345678899999988887764 677899999999998876543 345667788
Q ss_pred CCCCCCCEEEEecCCCC--CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh---h
Q 036427 345 GMDEDLPAVLLMGGGEG--MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS---K 419 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g--~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~---~ 419 (536)
+++++.+++++.++... .++...+++++.....+ ..++.. ++++|.++..... ....++.+.|+++ +
T Consensus 186 ~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~---~~~~~~-~~i~G~~~~~~~~----~~~~~v~~~g~~~~~~~ 257 (365)
T cd03825 186 GLPADKKIILFGAVGGTDPRKGFDELIEALKRLAER---WKDDIE-LVVFGASDPEIPP----DLPFPVHYLGSLNDDES 257 (365)
T ss_pred CCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc---cCCCeE-EEEeCCCchhhhc----cCCCceEecCCcCCHHH
Confidence 88877776655555444 56677777766543220 124555 4566776532211 3456899999986 6
Q ss_pred HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 420 MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 420 l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
+..+|+.||++++|| | |.+++|||++|+|||+++.++..+. +.+.+.|.++. |++++++++.++++ ++
T Consensus 258 ~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~-----~~~~~~g~~~~~~~~~~~~~~l~~l~~-~~ 331 (365)
T cd03825 258 LALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDI-----VDHGVTGYLAKPGDPEDLAEGIEWLLA-DP 331 (365)
T ss_pred HHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhh-----eeCCCceEEeCCCCHHHHHHHHHHHHh-CH
Confidence 889999999999998 3 8999999999999999987554442 33334676665 89999999999999 99
Q ss_pred HHHHHHHHHHHHhcC-CchHHHHHHHHHHHHhh
Q 036427 494 DELKAMSQNALKLAR-PDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~-~~~~~~i~~~i~~l~~~ 525 (536)
+.+.+|++++++.+. .++++++++.+.++++.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 332 DEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999874 58999999999988753
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-23 Score=223.72 Aligned_cols=265 Identities=15% Similarity=0.137 Sum_probs=187.3
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c----------------------------cccccc
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H----------------------------PTWFHK 293 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~----------------------------~~~~~~ 293 (536)
+++|||||+|......+|..+ +.... .++|.+..+|+.... . -++..+
T Consensus 131 ~~~pDIiH~Hdw~~~l~~~~l-~~~~~-~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 131 GFVPDIVHAHDWQAGLAPAYL-HYSGR-PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCCEEEECCcHHHHHHHHH-HhCCC-CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 579999999984333334333 32221 247888777764310 0 012346
Q ss_pred cCCEEEEcCHHHHHHHHHh----CC------CCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHcC
Q 036427 294 LVTRCYCPTADVAKRAMKA----GL------QASQIKVYGLPVRPSFVKPVRP------------------KVELRRELG 345 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~----g~------~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~lg 345 (536)
.+|.++++|+..++.+... |+ ++.++.+++|++|.+.+.+..+ +..+++++|
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g 288 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFG 288 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcC
Confidence 8899999999999988752 22 3678999999999887765432 246788899
Q ss_pred CCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCCCCE-EEecChhh
Q 036427 346 MDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWKIPV-QVKGFVSK 419 (536)
Q Consensus 346 i~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~~~V-~~~G~v~~ 419 (536)
++. +.++++++|+....|++..+++++..... .++++ ++.|.++ ++.+.++++ ....++ .++|+.++
T Consensus 289 l~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~------~~~~l-vivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~ 361 (485)
T PRK14099 289 LDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG------EGAQL-ALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEA 361 (485)
T ss_pred CCcccCCcEEEEEecCCccccHHHHHHHHHHHHh------cCcEE-EEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHH
Confidence 974 46677788888888888888887765442 34655 4556654 233333322 123455 78999889
Q ss_pred HHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---------CceeecC--CHHHHHH
Q 036427 420 MEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN---------GCGKFSK--SPKEIAN 483 (536)
Q Consensus 420 l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~---------g~g~~~~--d~~~La~ 483 (536)
+..+|. .||++++|| | |++.+|||+||+|+|+++.++..+. +.+. +.|++++ |+++|++
T Consensus 362 l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~-----V~~~~~~~~~~~~~~G~l~~~~d~~~La~ 436 (485)
T PRK14099 362 LAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADT-----VVDANEMAIATGVATGVQFSPVTADALAA 436 (485)
T ss_pred HHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccce-----eecccccccccCCCceEEeCCCCHHHHHH
Confidence 999874 699999998 4 8999999999988888886554442 2222 4677765 8999999
Q ss_pred HHHH---HhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 484 MVSQ---WFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 484 ~I~~---ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+|.+ +++ |++.+++|+++++ .+.++|+++++++++++++
T Consensus 437 ai~~a~~l~~-d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 437 ALRKTAALFA-DPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHH
Confidence 9986 778 8999999999986 3679999999999887765
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-23 Score=211.55 Aligned_cols=335 Identities=15% Similarity=0.140 Sum_probs=221.5
Q ss_pred eEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 146 KVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||+|++.. ..||..+.+..|+++|.+. |++|.+................ ........
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~---------~~~~~~~~--------- 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSAR---GPDVLVVSVAALYPSLLYGGEQ---------EVVRVIVL--------- 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhc---CCeEEEEEeecccCcccCCCcc---------cceeeeec---------
Confidence 78998744 2489999999999999998 7777665432221111000000 00000000
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcc--cchHHHHHHHHcCCCCCceEEEEecCCCCcc--------cccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPL--MQHVPLRILRAKGLLKKIVFTTVITDLSTCH--------PTWFHK 293 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~--~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--------~~~~~~ 293 (536)
........+.+.+++.+||+||++... ................++|++...|+..... .+.+.+
T Consensus 60 ------~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 133 (366)
T cd03822 60 ------DNPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLR 133 (366)
T ss_pred ------CCchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhhhHHHHHHHh
Confidence 011122355677889999999987621 1111111111110112488888887751111 123457
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.+|.++++|....+.+..... +.++.+++++++...+...... +......+.++++++|+....++...+++++.
T Consensus 134 ~~d~ii~~s~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~ 208 (366)
T cd03822 134 RADAVIVMSSELLRALLLRAY-PEKIAVIPHGVPDPPAEPPESL----KALGGLDGRPVLLTFGLLRPYKGLELLLEALP 208 (366)
T ss_pred cCCEEEEeeHHHHHHHHhhcC-CCcEEEeCCCCcCcccCCchhh----HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHH
Confidence 899999996444444333222 4789999999987665433211 33344556678888888777788887777776
Q ss_pred HHhhhcccCCCCcEEEEEecCCH-HHHH-------HHHcCCCCCCEEEecC-h--hhHHHHHhhcCeEEECC-----C-h
Q 036427 374 NALYDENLGEPIGQVLVICGRNK-KLAN-------KLLSTDWKIPVQVKGF-V--SKMEEAMGACDCIITKA-----G-P 436 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~-~l~~-------~l~~~~~~~~V~~~G~-v--~~l~~ll~~aDv~V~~s-----G-~ 436 (536)
+... ..++++++ ++|.+. +... .+++.+...+|++.|. + +++.++|+.||++++|+ | +
T Consensus 209 ~~~~----~~~~~~l~-i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~ 283 (366)
T cd03822 209 LLVA----KHPDVRLL-VAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS 283 (366)
T ss_pred HHHh----hCCCeEEE-EeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccc
Confidence 5443 24567654 456543 1111 1566778889999986 5 58999999999999986 3 7
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHH
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFR 514 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~ 514 (536)
++++|||++|+|||+++.++ .+ .+.+.+.|.+++ |+++++++|..+++ +++.+.+|+++++++++++++++
T Consensus 284 ~~~~Ea~a~G~PvI~~~~~~-~~-----~i~~~~~g~~~~~~d~~~~~~~l~~l~~-~~~~~~~~~~~~~~~~~~~s~~~ 356 (366)
T cd03822 284 GVLAYAIGFGKPVISTPVGH-AE-----EVLDGGTGLLVPPGDPAALAEAIRRLLA-DPELAQALRARAREYARAMSWER 356 (366)
T ss_pred hHHHHHHHcCCCEEecCCCC-hh-----eeeeCCCcEEEcCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHhhCCHHH
Confidence 89999999999999999755 33 256667777764 79999999999999 99999999999999998899999
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
+++.+.++++
T Consensus 357 ~~~~~~~~~~ 366 (366)
T cd03822 357 VAERYLRLLA 366 (366)
T ss_pred HHHHHHHHhC
Confidence 9999998763
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-23 Score=209.34 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=234.1
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++.. .+||+...+..|++.|.+. |++|.++................. .... ...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~i~~~~~~~~~~~~~~~~~~---~~~~-~~~------------ 61 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAAR---GHEVTVLTPGDGGLPDEEEVGGIV---VVRP-PPL------------ 61 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhc---CceEEEEecCCCCCCceeeecCcc---eecC-Ccc------------
Confidence 68888743 2489999999999999987 788877654332111000000000 0000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH--------------- 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--------------- 287 (536)
...............+.+++++.+||+|+++.+..........+.. ++|++...++.....
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 137 (374)
T cd03801 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLL----GIPLVLTVHGLEFGRPGNELGLLLKLARAL 137 (374)
T ss_pred cccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhc----CCcEEEEeccchhhccccchhHHHHHHHHH
Confidence 0000111233344567778889999999999876543333223322 388887777654211
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
..+..+.+|.+++.|+...+.+.+.+. ++.++.+++++++...+.+.. ...+.......+.+.++++|+....++..
T Consensus 138 ~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~g~~~~~k~~~ 215 (374)
T cd03801 138 ERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP--RAARRRLGIPEDEPVILFVGRLVPRKGVD 215 (374)
T ss_pred HHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc--hHHHhhcCCcCCCeEEEEecchhhhcCHH
Confidence 134567889999999999999988653 346899999999887665432 33344444556667788888877777777
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PG 437 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~ 437 (536)
.+++++..... ..+++++ ++.|.+. .+.+.+++.+...+|.+.|++ +++.++|+.||+++.++ | |+
T Consensus 216 ~~i~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~ 290 (374)
T cd03801 216 LLLEALAKLRK----EYPDVRL-VIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGL 290 (374)
T ss_pred HHHHHHHHHhh----hcCCeEE-EEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccc
Confidence 77776655432 2355665 4556554 233344456677899999999 79999999999999987 3 89
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHH-HhcCCchHHH
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNAL-KLARPDAVFR 514 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~-~~a~~~~~~~ 514 (536)
+++|||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|+++++ ...+.+++++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~-----~~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPE-----VVEDGETGLLVPPGDPEALAEAILRLLD-DPELRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhH-----HhcCCcceEEeCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999998644333 244456677765 68999999999999 9999999999998 4567799999
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
+++.+.++++
T Consensus 365 ~~~~~~~~~~ 374 (374)
T cd03801 365 VAARTEEVYY 374 (374)
T ss_pred HHHHHHHhhC
Confidence 9999988763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-23 Score=215.26 Aligned_cols=261 Identities=15% Similarity=0.171 Sum_probs=194.3
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-ccc---------------ccccccCCEEE
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHP---------------TWFHKLVTRCY 299 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~---------------~~~~~~~d~vi 299 (536)
..+.+++++.+||+||++........+.+++..| +|++...|+... ... +.+.+.+|.++
T Consensus 72 ~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~----~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 147 (367)
T cd05844 72 PQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLG----VPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFI 147 (367)
T ss_pred cHHHHHHHhhCCCEEEeccCchHHHHHHHHHHcC----CCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEE
Confidence 3555578899999999987654333344455555 788765553221 000 12346789999
Q ss_pred EcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhc
Q 036427 300 CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDE 379 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~ 379 (536)
++|+..++.+.+.++++.++.+++|+++.+.+.+... ..+.+.++++|+....|+...+++++.....
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~~----------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~-- 215 (367)
T cd05844 148 AVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATP----------ARRPPRILFVGRFVEKKGPLLLLEAFARLAR-- 215 (367)
T ss_pred ECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCCC----------CCCCcEEEEEEeeccccChHHHHHHHHHHHH--
Confidence 9999999999988888889999999998766543211 1345678888887777777777777765433
Q ss_pred ccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---------C-hHHHHHHHH
Q 036427 380 NLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---------G-PGTIAEAMI 444 (536)
Q Consensus 380 ~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---------G-~~tllEAma 444 (536)
..+++++ +++|.++ ++.+..++++...+|+|.|++ +++.++|+.||++|+|| | |++++|||+
T Consensus 216 --~~~~~~l-~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a 292 (367)
T cd05844 216 --RVPEVRL-VIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQA 292 (367)
T ss_pred --hCCCeEE-EEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHH
Confidence 2456664 5567665 344455566677899999998 58999999999999986 2 799999999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHE 521 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~ 521 (536)
+|+|||+++..+..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|+.++++.+ +.++++.+++.+.+
T Consensus 293 ~G~PvI~s~~~~~~e-----~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 293 SGVPVVATRHGGIPE-----AVEDGETGLLVPEGDVAALAAALGRLLA-DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred cCCCEEEeCCCCchh-----heecCCeeEEECCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999999999755433 245556777774 89999999999999 9999999999999987 56899999888765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-23 Score=216.19 Aligned_cols=350 Identities=16% Similarity=0.141 Sum_probs=209.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec-ccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL-WSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~-~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
+|||+|.++++ |||...+. ++++|++. +++++++.... .-.....+. ..+ .+. .....++.
T Consensus 1 ~~ki~i~~Ggt-~G~i~~a~-l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-~~~--l~~~g~~~----------- 62 (380)
T PRK00025 1 PLRIAIVAGEV-SGDLLGAG-LIRALKAR-APNLEFVGVGGPRMQAAGCES-LFD-MEE--LAVMGLVE----------- 62 (380)
T ss_pred CceEEEEecCc-CHHHHHHH-HHHHHHhc-CCCcEEEEEccHHHHhCCCcc-ccC-HHH--hhhccHHH-----------
Confidence 57999999999 79999999 99999986 33444443221 101111110 010 000 00000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC-Cccc---ccccccCCE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS-TCHP---TWFHKLVTR 297 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~-~~~~---~~~~~~~d~ 297 (536)
.............++.+++++++||+||+++....... +..++..| +|++.+.+... .... +.+.+.+|.
T Consensus 63 -~~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~----ip~i~~~~~~~~~~~~~~~~~~~~~~d~ 137 (380)
T PRK00025 63 -VLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAG----IPTIHYVSPSVWAWRQGRAFKIAKATDH 137 (380)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCC----CCEEEEeCCchhhcCchHHHHHHHHHhh
Confidence 00001122334567888999999999999763211111 22234444 89876655321 0111 234567899
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++.++...+.+.+.|.+ +.++|||+.+..... ..+...+++++++++.+++++++|+.+.. ....+..+.+++.
T Consensus 138 i~~~~~~~~~~~~~~g~~---~~~~G~p~~~~~~~~-~~~~~~~~~l~~~~~~~~il~~~gsr~~~-~~~~~~~l~~a~~ 212 (380)
T PRK00025 138 VLALFPFEAAFYDKLGVP---VTFVGHPLADAIPLL-PDRAAARARLGLDPDARVLALLPGSRGQE-IKRLLPPFLKAAQ 212 (380)
T ss_pred heeCCccCHHHHHhcCCC---eEEECcCHHHhcccc-cChHHHHHHcCCCCCCCEEEEECCCCHHH-HHHHHHHHHHHHH
Confidence 999999998888877754 889999987653322 23456788899988888877777765432 1122222222221
Q ss_pred hcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 378 DENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
......++.++++++|.+. ++.+.+++.+ ..++.+.. +++.++|+.||++|++||..+ +|||++|+|+|+++.
T Consensus 213 ~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~v~~~~--~~~~~~~~~aDl~v~~sG~~~-lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 213 LLQQRYPDLRFVLPLVNPKRREQIEEALAEYA-GLEVTLLD--GQKREAMAAADAALAASGTVT-LELALLKVPMVVGYK 288 (380)
T ss_pred HHHHhCCCeEEEEecCChhhHHHHHHHHhhcC-CCCeEEEc--ccHHHHHHhCCEEEECccHHH-HHHHHhCCCEEEEEc
Confidence 1111245677666655333 2333343330 22355543 589999999999999987555 599999999999965
Q ss_pred CCccccCC------------hhhHhhCCce--eecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHH---hcCCchHHHH
Q 036427 455 IAGQEAGN------------VPYVVENGCG--KFSK--SPKEIANMVSQWFGPKIDELKAMSQNALK---LARPDAVFRI 515 (536)
Q Consensus 455 ~~~~e~~n------------a~~lv~~g~g--~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~---~a~~~~~~~i 515 (536)
.+...... +..+.+.+.+ ...+ |++.+++.+.++++ |++.+++|++++.+ .....+.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~a~~~~ 367 (380)
T PRK00025 289 VSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLA-DGARRQALLEGFTELHQQLRCGADERA 367 (380)
T ss_pred cCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 32211001 1112222211 1222 78999999999999 99999999998632 2266799999
Q ss_pred HHHHHHHHhhc
Q 036427 516 VQDLHELVRQR 526 (536)
Q Consensus 516 ~~~i~~l~~~~ 526 (536)
++.|.+++.++
T Consensus 368 ~~~i~~~~~~~ 378 (380)
T PRK00025 368 AQAVLELLKQR 378 (380)
T ss_pred HHHHHHHhhhc
Confidence 99999887654
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-23 Score=226.57 Aligned_cols=277 Identities=10% Similarity=0.042 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEE-EecCCCCc-cc-c----------cc-cccCCE
Q 036427 232 TFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTT-VITDLSTC-HP-T----------WF-HKLVTR 297 (536)
Q Consensus 232 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~-~~~d~~~~-~~-~----------~~-~~~~d~ 297 (536)
....+++.+++++++|||||++......+...+.+..+ +|++. ..+.+... .. . ++ ....+.
T Consensus 386 ~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~g----vPvIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i 461 (694)
T PRK15179 386 IEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAG----VPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVA 461 (694)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcC----CCEEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeE
Confidence 34457889999999999999987654333333334333 67653 33332110 10 0 11 112345
Q ss_pred EEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH--cCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 298 CYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRE--LGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 298 vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~--lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+++.|...++.+.+ ++++++++.+++|+++...+.+.......+.. ...+.+.++|+++|+....|+...+++++.+
T Consensus 462 ~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~ 541 (694)
T PRK15179 462 LSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQR 541 (694)
T ss_pred EEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHH
Confidence 66778888777665 58888999999999987766432211111222 2234455678888888888888888888876
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
..+ ..+++++ +++|.++ ++.+.+++.++.++|+|+|+.+++..+|+.||++|++| | |++++|||+||+
T Consensus 542 l~~----~~p~~~L-vIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~ 616 (694)
T PRK15179 542 FAA----SHPKVRF-IMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV 616 (694)
T ss_pred HHH----HCcCeEE-EEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCC
Confidence 554 2467765 4556654 45666777888899999999999999999999999998 4 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCC-ceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVENG-CGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHE 521 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~ 521 (536)
|||+++.++..| ++.+| .|++++ | +++++++|.+++. +......+++++++.+ +.++++++++.+.+
T Consensus 617 PVVat~~gG~~E------iV~dg~~GlLv~~~d~~~~~La~aL~~ll~-~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 617 PVVTTLAGGAGE------AVQEGVTGLTLPADTVTAPDVAEALARIHD-MCAADPGIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred eEEEECCCChHH------HccCCCCEEEeCCCCCChHHHHHHHHHHHh-ChhccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999754333 55444 677775 3 5688888888887 6665667888888877 46999999999998
Q ss_pred HHh
Q 036427 522 LVR 524 (536)
Q Consensus 522 l~~ 524 (536)
+++
T Consensus 690 lY~ 692 (694)
T PRK15179 690 CYQ 692 (694)
T ss_pred HhC
Confidence 874
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-23 Score=216.67 Aligned_cols=275 Identities=12% Similarity=0.063 Sum_probs=195.9
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE-ecCCCCcc------cc--------cccccCCEEE
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV-ITDLSTCH------PT--------WFHKLVTRCY 299 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~-~~d~~~~~------~~--------~~~~~~d~vi 299 (536)
...+..++++.+||+||++...........++..| +|++.. .+.+.... .. ++.+.+| ++
T Consensus 269 ~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lag----vpviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd-~v 343 (578)
T PRK15490 269 IKHLVPHLCERKLDYLSVWQDGACLMIALAALIAG----VPRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVD-FM 343 (578)
T ss_pred HHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcC----CCEEEEeecccCCcchhhHHHHHHHHhhhhceeEecch-hh
Confidence 45788899999999999987554333344445455 677532 22211100 11 1133344 56
Q ss_pred EcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCch-HHHHHH--cCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPK-VELRRE--LGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~-~~~r~~--lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
+.+..+.+.+.++ +++++++.+++|+++...+.+.... ...++. .+++++.++++++|+..+.|+...++.++.+.
T Consensus 344 ~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 344 SNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred hccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 7788888877664 7899999999999998766553221 123332 34555667788889988889988888888766
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP 448 (536)
++ ..+++++ +++|+++ ++.+.+++.++.++|+|+|+.+++.++|+.+|++|+|| | |++++|||++|+|
T Consensus 424 lk----~~pdirL-vIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 424 LQ----HHPATRF-VLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred Hh----HCCCeEE-EEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCC
Confidence 54 2466765 4557765 45566677788899999999999999999999999998 4 8999999999999
Q ss_pred EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHH---HHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHH
Q 036427 449 IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMV---SQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHEL 522 (536)
Q Consensus 449 VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I---~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l 522 (536)
||+++.++..+ .+.+...|++++ |++++++++ ..+.+ ..+.+..|+++|++++ ..++++++++.+.++
T Consensus 499 VVATdvGG~~E-----iV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~-ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki 572 (578)
T PRK15490 499 VISTPAGGSAE-----CFIEGVSGFILDDAQTVNLDQACRYAEKLVN-LWRSRTGICQQTQSFLQERFTVEHMVGTFVKT 572 (578)
T ss_pred EEEeCCCCcHH-----HcccCCcEEEECCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 99999755443 244555677765 666777665 44555 5555667999999987 459999999999999
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
++.
T Consensus 573 ~~~ 575 (578)
T PRK15490 573 IAS 575 (578)
T ss_pred HHh
Confidence 875
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-23 Score=215.81 Aligned_cols=342 Identities=13% Similarity=0.134 Sum_probs=217.8
Q ss_pred eEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++.. .+||.++.+.++++.|.+. |++|.+......... +. ............+. .. . .
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~---g~~v~~~~~~~~~~~--~~-~~~~~~~~~~g~~~-----~~-----~-~ 63 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDL---GVDTRWEVIKGDPEF--FN-VTKKFHNALQGADI-----EL-----S-E 63 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHc---CCCceEEecCCChhH--HH-HHHHhhHhhcCCCC-----CC-----C-H
Confidence 68888754 4589999999999999998 666655432111000 00 00000000011100 00 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCCccc------ccccccCCE
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHP------TWFHKLVTR 297 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~------~~~~~~~d~ 297 (536)
.............+.+.+.+.+||+||++.+....+ ..+++.. ++|++...| +...... +++.+.+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~--~~~~~~~---~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~ 138 (372)
T cd03792 64 EEKEIYLEWNEENAERPLLDLDADVVVIHDPQPLAL--PLFKKKR---GRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDA 138 (372)
T ss_pred HHHHHHHHHHHHHhccccccCCCCEEEECCCCchhH--HHhhhcC---CCeEEEEeeeecCCCcHHHHHHHHHHHHhCCE
Confidence 000000000001111134577999999998764332 2222221 377764433 3321111 223456888
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC--CC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK--PV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~--~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+++.++. +...+++..++ +++|++++.... .. ......+++++++++.++++++|+....|+...+++++.
T Consensus 139 ~i~~~~~----~~~~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 213 (372)
T cd03792 139 AVFHLPE----YVPPQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYR 213 (372)
T ss_pred EeecHHH----hcCCCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHH
Confidence 8887733 23345665555 999999875311 11 123456778999888999999999888888888888776
Q ss_pred HHhhhcccCCCCcEEEEEecCCH-------HHHHHHH-cCCCCCCEEEecCh----hhHHHHHhhcCeEEECC---C-hH
Q 036427 374 NALYDENLGEPIGQVLVICGRNK-------KLANKLL-STDWKIPVQVKGFV----SKMEEAMGACDCIITKA---G-PG 437 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~-~~~~~~~V~~~G~v----~~l~~ll~~aDv~V~~s---G-~~ 437 (536)
.... ..++++++ ++|.++ +..+.+. ..+..++|.+.|+. +++.++|+.||++++|| | |+
T Consensus 214 ~l~~----~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~ 288 (372)
T cd03792 214 KVKE----RVPDPQLV-LVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGL 288 (372)
T ss_pred HHHh----hCCCCEEE-EEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCH
Confidence 5443 23567654 456542 1222322 34566789999886 58899999999999998 4 89
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHH
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIV 516 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~ 516 (536)
+++|||+||+|||+++.++..+ .+.+...|.+++++++++.+|.++++ +++.+++|++++++.+ +.++++.++
T Consensus 289 ~~lEA~a~G~Pvv~s~~~~~~~-----~i~~~~~g~~~~~~~~~a~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~ 362 (372)
T cd03792 289 TVTEALWKGKPVIAGPVGGIPL-----QIEDGETGFLVDTVEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHL 362 (372)
T ss_pred HHHHHHHcCCCEEEcCCCCchh-----hcccCCceEEeCCcHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 9999999999999998655333 24455567777888999999999999 9999999999999976 569999999
Q ss_pred HHHHHHHhh
Q 036427 517 QDLHELVRQ 525 (536)
Q Consensus 517 ~~i~~l~~~ 525 (536)
+.+.++++.
T Consensus 363 ~~~~~~~~~ 371 (372)
T cd03792 363 KDYLYLISK 371 (372)
T ss_pred HHHHHHHHh
Confidence 999988764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-23 Score=207.88 Aligned_cols=331 Identities=18% Similarity=0.160 Sum_probs=221.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCC-CCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTP-WPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~-~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++... ||+......+++.|.+. |++|.++........ .....+ ..... .... ..
T Consensus 1 kIl~i~~~~-~g~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~-~~--- 59 (359)
T cd03808 1 KILHIVTVD-GGLYSFRLPLIKALRAA---GYEVHVVAPPGDELEELEALGV-----------KVIPI--PLDR-RG--- 59 (359)
T ss_pred CeeEEEecc-hhHHHHHHHHHHHHHhc---CCeeEEEecCCCcccccccCCc-----------eEEec--cccc-cc---
Confidence 689998874 89999999999999888 788877754332111 000000 00000 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-------------cccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------PTWF 291 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------~~~~ 291 (536)
............+.+++++.+||+|+++............+..+ ..+++...++..... .++.
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (359)
T cd03808 60 -INPFKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAG---VPKVIYTVHGLGFVFTSGGLKRRLYLLLERLA 135 (359)
T ss_pred -cChHhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcC---CCCEEEEecCcchhhccchhHHHHHHHHHHHH
Confidence 00011222345677889999999999986544322222223222 245555555432110 1345
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCC--CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQ--ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~--~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
.+.+|.+++.|+...+.+.+.+.. ..++.+.+++++...+.+.... ...+.+.++++|+....++...++
T Consensus 136 ~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~G~~~~~k~~~~li 207 (359)
T cd03808 136 LRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP--------IPEDDPVFLFVARLLKDKGIDELL 207 (359)
T ss_pred HhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc--------cCCCCcEEEEEeccccccCHHHHH
Confidence 567899999999999999887654 4567778888887665433211 134567788888877777777777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-H--HHHH-HHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-K--LANK-LLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~--l~~~-l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
+++..... ..++++++ ++|.+. + .... +.+.....+|.+.|+.+++.++|+.||++++|+ | |++++|
T Consensus 208 ~~~~~l~~----~~~~~~l~-i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~~e~~~~~~~E 282 (359)
T cd03808 208 EAARILKA----KGPNVRLL-LVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLE 282 (359)
T ss_pred HHHHHHHh----cCCCeEEE-EEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCcccCcchHHHH
Confidence 66654432 24667654 446554 1 1111 455566779999999999999999999999998 3 899999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQD 518 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~ 518 (536)
||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.+++. +++.++++++++++. ...++++.+++.
T Consensus 283 a~~~G~Pvi~s~~~~~~~-----~i~~~~~g~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 356 (359)
T cd03808 283 AMAMGRPVIATDVPGCRE-----AVIDGVNGFLVPPGDAEALADAIERLIE-DPELRARMGQAARKRAEEEFDEEIVVKK 356 (359)
T ss_pred HHHcCCCEEEecCCCchh-----hhhcCcceEEECCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999998655433 244456677765 79999999999999 999999999999998 677899988887
Q ss_pred HH
Q 036427 519 LH 520 (536)
Q Consensus 519 i~ 520 (536)
+.
T Consensus 357 ~~ 358 (359)
T cd03808 357 LL 358 (359)
T ss_pred hh
Confidence 65
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-23 Score=215.05 Aligned_cols=348 Identities=13% Similarity=0.009 Sum_probs=215.5
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
|||||++.++ .||.++.+..||++|.++ ||+|.+++....... .+... ......+.............
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~---G~~V~v~~~~~~~~~-~~~~~-------~~~~~~i~~~~~~~~~~~~~ 69 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSR---GHEVTIYTSHHDPSH-CFEET-------KDGTLPVRVRGDWLPRSIFG 69 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhC---CCeEEEEcCCCCchh-cchhc-------cCCeeEEEEEeEEEcchhhH
Confidence 7999998764 389999999999999998 788877654221100 00000 00000000000000000000
Q ss_pred c--hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---cc-----------
Q 036427 224 Q--SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---CH----------- 287 (536)
Q Consensus 224 ~--~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---~~----------- 287 (536)
. .+..............+++..++|+||++.... .++ +.+... +.|++.+.+.... ..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~-~~~--~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 143 (392)
T cd03805 70 RFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSA-CVP--LLKLFS---PSKILFYCHFPDQLLAQRGSLLKRLYRKP 143 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcch-HHH--HHHHhc---CCcEEEEEecChHHhcCCCcHHHHHHHHH
Confidence 0 000000000000111235667999999875332 222 222222 2566655442110 00
Q ss_pred ----cccccccCCEEEEcCHHHHHHHHHh-C-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 288 ----PTWFHKLVTRCYCPTADVAKRAMKA-G-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 288 ----~~~~~~~~d~vi~~S~~~~~~l~~~-g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
.++..+.+|.++++|+..++.+.+. + .+...+.+++|+++.+.+.+..... .++.....++.++++++|+...
T Consensus 144 ~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~-~~~~~~~~~~~~~i~~~grl~~ 222 (392)
T cd03805 144 FDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP-DPGLLIPKSGKKTFLSINRFER 222 (392)
T ss_pred HHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc-cccccccCCCceEEEEEeeecc
Confidence 0234678999999999999987763 2 2333445899999987665432211 2233445566777888888777
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----------HHHHHHHHc-CCCCCCEEEecChh--hHHHHHhhc
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRN-----------KKLANKLLS-TDWKIPVQVKGFVS--KMEEAMGAC 427 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----------~~l~~~l~~-~~~~~~V~~~G~v~--~l~~ll~~a 427 (536)
.|+...+++++.+...+ ....+++++++ +|.+ .++.+.+++ .+..++|.|+|+++ ++.++|+.|
T Consensus 223 ~Kg~~~ll~a~~~l~~~-~~~~~~~~l~i-~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~a 300 (392)
T cd03805 223 KKNIALAIEAFAILKDK-LAEFKNVRLVI-AGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSA 300 (392)
T ss_pred cCChHHHHHHHHHHHhh-cccccCeEEEE-EcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhC
Confidence 78888777777654331 00015666544 4543 234455666 67788999999984 678999999
Q ss_pred CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 428 DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 428 Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
|+++++| | |.+++|||+||+|||+++.++..+. +.+.+.|.+++ |+++++++|..+++ +++.+++|+++
T Consensus 301 d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~-----i~~~~~g~~~~~~~~~~a~~i~~l~~-~~~~~~~~~~~ 374 (392)
T cd03805 301 RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLET-----VVDGETGFLCEPTPEEFAEAMLKLAN-DPDLADRMGAA 374 (392)
T ss_pred eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHH-----hccCCceEEeCCCHHHHHHHHHHHHh-ChHHHHHHHHH
Confidence 9999987 3 8999999999999999997554442 44445676664 89999999999999 99999999999
Q ss_pred HHHhc-CCchHHHHHHH
Q 036427 503 ALKLA-RPDAVFRIVQD 518 (536)
Q Consensus 503 a~~~a-~~~~~~~i~~~ 518 (536)
|++.+ +.++++.+++.
T Consensus 375 a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 375 GRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhcCHHHHhhh
Confidence 99976 55888887765
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-23 Score=220.18 Aligned_cols=276 Identities=14% Similarity=0.118 Sum_probs=189.4
Q ss_pred HHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHH--cCCCCCceEEEEecCCCCc--c-----------------c---
Q 036427 235 AREVAKGLMK--YQPDIIISVHPLMQHVPLRILRA--KGLLKKIVFTTVITDLSTC--H-----------------P--- 288 (536)
Q Consensus 235 ~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~--~g~~~~ip~v~~~~d~~~~--~-----------------~--- 288 (536)
.+...+++++ .+||+||+|......++..+.+. .+ ..++|++..+|..... . .
T Consensus 105 ~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 105 SWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3444555554 48999999974333333333322 12 1248888776654210 0 0
Q ss_pred --------ccccccCCEEEEcCHHHHHHHHHh----------CCCCCCEEEeCCCCCCCCCCCCCc--------------
Q 036427 289 --------TWFHKLVTRCYCPTADVAKRAMKA----------GLQASQIKVYGLPVRPSFVKPVRP-------------- 336 (536)
Q Consensus 289 --------~~~~~~~d~vi~~S~~~~~~l~~~----------g~~~~ki~vignpv~~~~~~~~~~-------------- 336 (536)
++..+.+|.++++|+..++.+... +.+..++.+++|++|.+.+.+..+
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~ 263 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEG 263 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhc
Confidence 112467899999999999887642 234678999999999987765321
Q ss_pred ----hHHHHHHcCCCC-CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCC
Q 036427 337 ----KVELRRELGMDE-DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWK 408 (536)
Q Consensus 337 ----~~~~r~~lgi~~-~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~ 408 (536)
+..+++++|+++ +.++++++|+....|++..+++++.+... .++++++ +|.++ .+.+.++++ ...
T Consensus 264 k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~------~~~~lvi-vG~g~~~~~~~l~~l~~~~~ 336 (466)
T PRK00654 264 KAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE------QGGQLVL-LGTGDPELEEAFRALAARYP 336 (466)
T ss_pred hHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh------cCCEEEE-EecCcHHHHHHHHHHHHHCC
Confidence 346788899975 67888899998888888888887765542 3566544 46653 233333221 123
Q ss_pred CCEE-EecChhh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------CceeecC
Q 036427 409 IPVQ-VKGFVSK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGKFSK 476 (536)
Q Consensus 409 ~~V~-~~G~v~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~~~~ 476 (536)
.++. +.|+.++ +..+|+.||++|+|| | |++++|||+||+|+|+++.++..+. +.+. +.|++++
T Consensus 337 ~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~-----v~~~~~~~~~~~G~lv~ 411 (466)
T PRK00654 337 GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADT-----VIDYNPEDGEATGFVFD 411 (466)
T ss_pred CcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccce-----eecCCCCCCCCceEEeC
Confidence 4555 4677644 568999999999998 4 8999999999999999987665442 3333 6677775
Q ss_pred --CHHHHHHHHHHHhCC--CHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 --SPKEIANMVSQWFGP--KIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 --d~~~La~~I~~ll~~--d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++|+++|.++++. +++.+++|++++.+ ..++|+++++++.+++++
T Consensus 412 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 412 DFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHH
Confidence 899999999987641 56678888888753 679999999999988765
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-22 Score=225.15 Aligned_cols=389 Identities=16% Similarity=0.127 Sum_probs=241.8
Q ss_pred CCCCCcccCCCcccccCCcccCCCCCCCCceEEEEeC------CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccC
Q 036427 116 SERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMS------DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHT 189 (536)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mKIL~~~~------~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~ 189 (536)
++.+|..|+..+.--|--.. .......+|||++++. .+ ||-.-.+.+|+++|.+. ||+|.|+.......
T Consensus 560 ~~~g~~yDn~~~~dyh~~v~-g~~~~~~pM~Il~VSsE~~P~aKv-GGLgDVV~sLp~ALa~~---Gh~V~VitP~Y~~i 634 (1036)
T PLN02316 560 KEEGGIFDNRNGLDYHIPVF-GGIAKEPPMHIVHIAVEMAPIAKV-GGLGDVVTSLSRAVQDL---NHNVDIILPKYDCL 634 (1036)
T ss_pred CCCCCCcCCCCCcCCccccc-CCCCCCCCcEEEEEEcccCCCCCc-CcHHHHHHHHHHHHHHc---CCEEEEEecCCccc
Confidence 44456677666553333222 3334456799999973 25 79999999999999999 77776654322110
Q ss_pred CC-CCCcch--hHHHHH------H----hhcccccee----ecCCCcccc-cchhhhhhhHHHHHHHHHHHHh--hCCCE
Q 036427 190 PW-PFNQLP--RSYNFL------V----KHGPLWKMT----YYGTAPRVI-HQSNFAATSTFIAREVAKGLMK--YQPDI 249 (536)
Q Consensus 190 ~~-~~~~~~--~~y~~~------~----~~~~l~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~--~kPDv 249 (536)
.. ....+. ..+... . ..-+.+.+- ++. ..... ..... ..-..+.+...+++++ .+|||
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~~~F~-r~~~Yg~~Dd~-~RF~~F~~Aale~l~~~~~~PDI 712 (1036)
T PLN02316 635 NLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFW-AGCVYGCRNDG-ERFGFFCHAALEFLLQSGFHPDI 712 (1036)
T ss_pred chhhcccceEEEEeccCCEEEEEEEEEECCcEEEEEeccccccC-CCCCCCchhHH-HHHHHHHHHHHHHHHhcCCCCCE
Confidence 00 000000 000000 0 000000000 000 00000 00000 1112233444455543 58999
Q ss_pred EEEcCcccchHHHHHHHHc---CCCCCceEEEEecCCCCc--ccccccccCCEEEEcCHHHHHHHHHhC-CC--CCCEEE
Q 036427 250 IISVHPLMQHVPLRILRAK---GLLKKIVFTTVITDLSTC--HPTWFHKLVTRCYCPTADVAKRAMKAG-LQ--ASQIKV 321 (536)
Q Consensus 250 Vi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~d~~~~--~~~~~~~~~d~vi~~S~~~~~~l~~~g-~~--~~ki~v 321 (536)
||+|.-....+++.+.... +. .++|++..+|..... ..++....+|.++++|+..++.+...+ +. ..++.+
T Consensus 713 IHaHDW~talva~llk~~~~~~~~-~~~p~V~TiHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~v 791 (1036)
T PLN02316 713 IHCHDWSSAPVAWLFKDHYAHYGL-SKARVVFTIHNLEFGANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHG 791 (1036)
T ss_pred EEECCChHHHHHHHHHHhhhhhcc-CCCCEEEEeCCcccchhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEE
Confidence 9999643333333332221 22 347888777754311 123455789999999999999887754 33 478999
Q ss_pred eCCCCCCCCCCCCCc-------------------hHHHHHHcCCCC-CCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 322 YGLPVRPSFVKPVRP-------------------KVELRRELGMDE-DLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 322 ignpv~~~~~~~~~~-------------------~~~~r~~lgi~~-~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
|+|++|...+.+..+ +..+++++|++. +.++++++|+....|++..++.++...+.
T Consensus 792 I~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~---- 867 (1036)
T PLN02316 792 ILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE---- 867 (1036)
T ss_pred EECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh----
Confidence 999999876544311 235788899984 67889999998888888877777766543
Q ss_pred CCCCcEEEEEecCCH--H----HHHHHHcCCC--CCCEEEecChhhH--HHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 382 GEPIGQVLVICGRNK--K----LANKLLSTDW--KIPVQVKGFVSKM--EEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~--~----l~~~l~~~~~--~~~V~~~G~v~~l--~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
.+.++ +++|.++ . +.+..++++. ..+|.|.+..++. ..+|+.||++++|| + |++.+|||+||+
T Consensus 868 --~~~ql-VIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt 944 (1036)
T PLN02316 868 --RNGQV-VLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS 944 (1036)
T ss_pred --cCcEE-EEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC
Confidence 35665 4457653 2 2233333332 4678888766543 37999999999999 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhh-------------CCceeecC--CHHHHHHHHHHHhCCC-HHHHHHHHHHHHHhc-CCc
Q 036427 448 PIILNDFIAGQEAGNVPYVVE-------------NGCGKFSK--SPKEIANMVSQWFGPK-IDELKAMSQNALKLA-RPD 510 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~-------------~g~g~~~~--d~~~La~~I~~ll~~d-~~~~~~m~~~a~~~a-~~~ 510 (536)
|+|+++.++..+. +.+ .+.|++++ |+++|+.+|.+++. + ++.+..|++.+++.+ +.+
T Consensus 945 ppVvs~vGGL~Dt-----V~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~-~~~~~~~~~~~~~r~~m~~dF 1018 (1036)
T PLN02316 945 IPVVRKTGGLFDT-----VFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAIS-AWYDGRDWFNSLCKRVMEQDW 1018 (1036)
T ss_pred CeEEEcCCCcHhh-----ccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHhhC
Confidence 9999987765553 222 24677775 89999999999998 5 456667788777764 569
Q ss_pred hHHHHHHHHHHHHhh
Q 036427 511 AVFRIVQDLHELVRQ 525 (536)
Q Consensus 511 ~~~~i~~~i~~l~~~ 525 (536)
+|+++++.+++++++
T Consensus 1019 SW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 1019 SWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999998865
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-22 Score=207.78 Aligned_cols=340 Identities=17% Similarity=0.118 Sum_probs=220.3
Q ss_pred eEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++..+ .||+...+..|++.|.+. |++|.+.+.............. .+... ........
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~ 65 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKL---GHEVTVATTDAGGDPLLVALNG---------VPVKL---FSINVAYG 65 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhc---CCcEEEEecCCCCccchhhccC---------ceeee---cccchhhh
Confidence 688887653 589999999999999888 7888776543321110000000 00000 00000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccch-H-HHHHHHHcCCCCCceEEEEecCCCCcc-------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQH-V-PLRILRAKGLLKKIVFTTVITDLSTCH------------- 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~-i-~~~~~~~~g~~~~ip~v~~~~d~~~~~------------- 287 (536)
..... ................+||+|++++.+... . ....++..+ +|++...++.....
T Consensus 66 ~~~~~--~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~ 139 (375)
T cd03821 66 LNLAR--YLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYG----IPYVVSPHGMLDPWALPHKALKKRLAW 139 (375)
T ss_pred hhhhh--hccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhC----CCEEEEccccccccccccchhhhHHHH
Confidence 00000 000011112223445689999998754321 1 122233333 78776655432111
Q ss_pred ---cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 288 ---PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 288 ---~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
..+..+.++.+++.+.......... .+..++.+++|+++.+.+.+...... ++.++.+.+.++++++|+....++
T Consensus 140 ~~~~~~~~~~~~~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 140 FLFERRLLQAAAAVHATSEQEAAEIRRL-GLKAPIAVIPNGVDIPPFAALPSRGR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred HHHHHHHHhcCCEEEECCHHHHHHHHhh-CCcccEEEcCCCcChhccCcchhhhh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 0223456788888887776665443 45678999999999876654432222 666777778888999998877788
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----H-HHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK----K-LANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA--- 434 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~-l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s--- 434 (536)
...+++++.+... ..+++++ +++|.+. . +....++.+..++|++.|+++ ++..+|+.||++|+|+
T Consensus 218 ~~~li~a~~~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e 292 (375)
T cd03821 218 LDLLIEAFAKLAE----RFPDWHL-VIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSE 292 (375)
T ss_pred HHHHHHHHHHhhh----hcCCeEE-EEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccC
Confidence 7777776654432 2356665 4556543 1 222225567778999999996 8999999999999998
Q ss_pred C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCch
Q 036427 435 G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDA 511 (536)
Q Consensus 435 G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~ 511 (536)
| |++++|||++|+|||+++.++..+ ++..+.|.+++ ++++++++|.++++ +++.+++|++++++. .+.++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQE------LIEYGCGWVVDDDVDALAAALRRALE-LPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHH------HhhcCceEEeCCChHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcC
Confidence 3 899999999999999998654333 44447777775 66999999999999 999999999999998 67799
Q ss_pred HHHHHHHHH
Q 036427 512 VFRIVQDLH 520 (536)
Q Consensus 512 ~~~i~~~i~ 520 (536)
++++++.+.
T Consensus 366 ~~~~~~~~~ 374 (375)
T cd03821 366 WTAIAQQLL 374 (375)
T ss_pred HHHHHHHhh
Confidence 999988875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-22 Score=213.55 Aligned_cols=339 Identities=12% Similarity=0.080 Sum_probs=206.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCc--c
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAP--R 220 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~--~ 220 (536)
+.+||++++... .|+..+...+++.|.++ ||+|.++..... .+... . ....+ .........+ .
T Consensus 2 ~~~~~~~~~~~~-~~~~~R~~~~a~~L~~~---G~~V~ii~~~~~---~~~~~----~--~~~~~--v~~~~~~~~~~~~ 66 (415)
T cd03816 2 KRKRVCVLVLGD-IGRSPRMQYHALSLAKH---GWKVDLVGYLET---PPHDE----I--LSNPN--ITIHPLPPPPQRL 66 (415)
T ss_pred CccEEEEEEecc-cCCCHHHHHHHHHHHhc---CceEEEEEecCC---CCCHH----H--hcCCC--EEEEECCCCcccc
Confidence 357899988877 57777778899999998 788877653211 00000 0 00000 0000000000 0
Q ss_pred -cccchhhh-hhhHHHHHH-HHHHHHhhCCCEEEEcCcccc--hH-HHHHHHHcCCCCCceEEEEecCCCC---------
Q 036427 221 -VIHQSNFA-ATSTFIARE-VAKGLMKYQPDIIISVHPLMQ--HV-PLRILRAKGLLKKIVFTTVITDLST--------- 285 (536)
Q Consensus 221 -~~~~~~~~-~~~~~~~~~-l~~~l~~~kPDvVi~~~~~~~--~i-~~~~~~~~g~~~~ip~v~~~~d~~~--------- 285 (536)
........ ......... +..++++.+||+||++.+... .. ...+.+..+ .|++...|++..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~----~~~V~~~h~~~~~~~~~~~~~ 142 (415)
T cd03816 67 NKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRR----TKLIIDWHNYGYTILALKLGE 142 (415)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC----CeEEEEcCCchHHHHhcccCC
Confidence 00000000 011111122 223456678999998764321 11 222233333 788766665421
Q ss_pred c---------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH-------------
Q 036427 286 C---------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRE------------- 343 (536)
Q Consensus 286 ~---------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~------------- 343 (536)
. ..+++.+.+|.++++|+.+++.+.+.+.+++++.+++|+... .+.+.. .+..+..
T Consensus 143 ~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~~-~f~p~~-~~~~~~~~~~~~~~~~~~~~ 220 (415)
T cd03816 143 NHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPE-QFRPLP-LEEKHELFLKLAKTFLTREL 220 (415)
T ss_pred CCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCHH-HceeCc-HHHHHHHHHhcccccccccc
Confidence 0 013456789999999999999998888889999999998433 333221 1111111
Q ss_pred ----cCCCCCC-CEEEEecCCCCCCcHHHHHHHHHHHhhhc--ccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEE
Q 036427 344 ----LGMDEDL-PAVLLMGGGEGMGPIEATARALGNALYDE--NLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 344 ----lgi~~~~-~~il~~gg~~g~k~~~~~l~al~~~l~~~--~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~ 413 (536)
.++.++. .+++++|+....+++..+++++....... ....+++++ +++|.|+ ++.+.+++.++.+.+.+
T Consensus 221 ~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l-~ivG~G~~~~~l~~~~~~~~l~~~~~~ 299 (415)
T cd03816 221 RIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLC-IITGKGPLKEKYLERIKELKLKKVTIR 299 (415)
T ss_pred ccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEE-EEEecCccHHHHHHHHHHcCCCcEEEE
Confidence 1222333 34555666666777777777775433210 001245665 5557665 45666677777644445
Q ss_pred ecCh--hhHHHHHhhcCeEEEC--C----C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHH
Q 036427 414 KGFV--SKMEEAMGACDCIITK--A----G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANM 484 (536)
Q Consensus 414 ~G~v--~~l~~ll~~aDv~V~~--s----G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~ 484 (536)
.|++ +++.++|+.||++|++ + | |++++|||+||+|||+++.++..| .+.+.++|.++.|+++|+++
T Consensus 300 ~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~e-----iv~~~~~G~lv~d~~~la~~ 374 (415)
T cd03816 300 TPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDE-----LVKHGENGLVFGDSEELAEQ 374 (415)
T ss_pred cCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHH-----HhcCCCCEEEECCHHHHHHH
Confidence 5776 6999999999999863 1 2 899999999999999998654333 23445568788899999999
Q ss_pred HHHHhCCC---HHHHHHHHHHHHHhcCC
Q 036427 485 VSQWFGPK---IDELKAMSQNALKLARP 509 (536)
Q Consensus 485 I~~ll~~d---~~~~~~m~~~a~~~a~~ 509 (536)
|..+++ | ++.+++|+++|+++.+.
T Consensus 375 i~~ll~-~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 375 LIDLLS-NFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHh-cCCCHHHHHHHHHHHHHhhhc
Confidence 999999 8 89999999999998844
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-22 Score=206.90 Aligned_cols=338 Identities=20% Similarity=0.241 Sum_probs=221.6
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++.. ..||+..++..++++|.+. |++|.+++......... ..... ... +..... ..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~-~~~~~-----~~~---~~~~~~-----~~ 63 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKR---GHEVYVVAPSYPGAPEE-EEVVV-----VRP---FRVPTF-----KY 63 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHc---CCeEEEEeCCCCCCCcc-ccccc-----ccc---cccccc-----hh
Confidence 68888733 3479999999999999998 78887765322111000 00000 000 000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTC--------------- 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~--------------- 286 (536)
.. ..........+.+.+++.+||+|+++.++..... ..+.++. ++|++...++....
T Consensus 64 ~~---~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (374)
T cd03817 64 PD---FRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKL----GIPVVATYHTMYEDYTHYVPLGRLLARAV 136 (374)
T ss_pred hh---hhccccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHc----CCCEEEEecCCHHHHHHHHhcccchhHHH
Confidence 00 0011112234555688899999999887554322 2233333 37887666653210
Q ss_pred ----ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC
Q 036427 287 ----HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM 362 (536)
Q Consensus 287 ----~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~ 362 (536)
..+++.+.+|.+++.|+..++.+.+.+.+ .++.+++++++...+.+.. ....++.+++.++.+.++++|+....
T Consensus 137 ~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~~ 214 (374)
T cd03817 137 VRRKLSRRFYNRCDAVIAPSEKIADLLREYGVK-RPIEVIPTGIDLDRFEPVD-GDDERRKLGIPEDEPVLLYVGRLAKE 214 (374)
T ss_pred HHHHHHHHHhhhCCEEEeccHHHHHHHHhcCCC-CceEEcCCccchhccCccc-hhHHHHhcCCCCCCeEEEEEeeeecc
Confidence 11234568999999999999988877654 4589999999887765543 23346667777777778888876666
Q ss_pred CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---
Q 036427 363 GPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA--- 434 (536)
Q Consensus 363 k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s--- 434 (536)
++...+++++..... ..+++++ ++.|.++ .+.+..++.+...+|.+.|++ +++.++|+.||+++.++
T Consensus 215 k~~~~l~~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e 289 (374)
T cd03817 215 KNIDFLIRAFARLLK----EEPDVKL-VIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTE 289 (374)
T ss_pred cCHHHHHHHHHHHHH----hCCCeEE-EEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccccc
Confidence 777766666654432 1356665 4456654 344445556777899999998 58999999999999997
Q ss_pred -ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCC-HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchH
Q 036427 435 -GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKS-PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAV 512 (536)
Q Consensus 435 -G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d-~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~ 512 (536)
+|.+++|||++|+|||+++.++..+ .+.+.+.|.++++ .++++++|..+++ +++.+++|++++++.+.++.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~~~-----~i~~~~~g~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGLPD-----LVADGENGFLFPPGDEALAEALLRLLQ-DPELRRRLSKNAEESAEKFS- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCChhh-----heecCceeEEeCCCCHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHH-
Confidence 3799999999999999998654333 2444466777752 2299999999999 99999999999999887765
Q ss_pred HHHHHHHHHHH
Q 036427 513 FRIVQDLHELV 523 (536)
Q Consensus 513 ~~i~~~i~~l~ 523 (536)
.++.+.+++
T Consensus 363 --~~~~~~~~~ 371 (374)
T cd03817 363 --FAKKVEKLY 371 (374)
T ss_pred --HHHHHHHHH
Confidence 344444444
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-22 Score=210.23 Aligned_cols=335 Identities=16% Similarity=0.168 Sum_probs=212.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh-ccccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH-GPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~~~ 223 (536)
..|+|.+.+. |+...+..|++.|++.++ ++.|+++..... .+....+. .+..... +.+.
T Consensus 51 ~~iW~Ha~s~--Ge~~~~~~l~~~l~~~~~-~~~i~~t~~t~~-----------~~~~~~~~~~~~~~~~-~~P~----- 110 (425)
T PRK05749 51 PLIWFHAVSV--GETRAAIPLIRALRKRYP-DLPILVTTMTPT-----------GSERAQALFGDDVEHR-YLPY----- 110 (425)
T ss_pred CeEEEEeCCH--HHHHHHHHHHHHHHHhCC-CCcEEEeCCCcc-----------HHHHHHHhcCCCceEE-EecC-----
Confidence 3599999998 799999999999999843 566666543221 11111111 1001111 1100
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-c---------ccccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-C---------HPTWFHK 293 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~---------~~~~~~~ 293 (536)
.....+.+++++++||+||++........+..++..+ +|++.+.+..+. . ..+++.+
T Consensus 111 ---------d~~~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~~~~----ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~ 177 (425)
T PRK05749 111 ---------DLPGAVRRFLRFWRPKLVIIMETELWPNLIAELKRRG----IPLVLANARLSERSFKRYQKFKRFYRLLFK 177 (425)
T ss_pred ---------CcHHHHHHHHHhhCCCEEEEEecchhHHHHHHHHHCC----CCEEEEeccCChhhHHHHHHHHHHHHHHHH
Confidence 0113667789999999999864322111122334444 887755443321 0 1134567
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
.+|.+++.|+..++.+.+.|++++ +.++||...+....+. .+...++++++ ++.+++++. +.. .++...++++
T Consensus 178 ~~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--~~~~vil~~-~~~-~~~~~~ll~A 252 (425)
T PRK05749 178 NIDLVLAQSEEDAERFLALGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA--PNRPVWIAA-STH-EGEEELVLDA 252 (425)
T ss_pred hCCEEEECCHHHHHHHHHcCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc--CCCcEEEEe-CCC-chHHHHHHHH
Confidence 899999999999999999998777 8899985322222111 12345666676 455666544 332 3444445555
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCC-------------CCEEEecChhhHHHHHhhcCeEEE-C
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWK-------------IPVQVKGFVSKMEEAMGACDCIIT-K 433 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~-------------~~V~~~G~v~~l~~ll~~aDv~V~-~ 433 (536)
+.+... ..+++++ +++|.++ ++.+.+++.++. .+|.+.+..+++..+|+.||++++ +
T Consensus 253 ~~~l~~----~~~~~~l-iivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~ 327 (425)
T PRK05749 253 HRALLK----QFPNLLL-ILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGG 327 (425)
T ss_pred HHHHHH----hCCCcEE-EEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECC
Confidence 544332 2467664 5567765 344555555442 256777777899999999999665 3
Q ss_pred C----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 434 A----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 434 s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
| ||.+++|||+||+|||+++..++..+ ..+.+.+.|....+.|+++|+++|..+++ |++.+++|+++|++.+..
T Consensus 328 S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e-~~~~~~~~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 328 SLVKRGGHNPLEPAAFGVPVISGPHTFNFKE-IFERLLQAGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred CcCCCCCCCHHHHHHhCCCEEECCCccCHHH-HHHHHHHCCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHh
Confidence 3 58899999999999999886543322 22333455655556799999999999999 999999999999998744
Q ss_pred --chHHHHHHHHHHHHh
Q 036427 510 --DAVFRIVQDLHELVR 524 (536)
Q Consensus 510 --~~~~~i~~~i~~l~~ 524 (536)
...+++.+.+.+.++
T Consensus 406 ~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 406 NQGALQRTLQLLEPYLP 422 (425)
T ss_pred CccHHHHHHHHHHHhcc
Confidence 566777777766544
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-22 Score=209.90 Aligned_cols=216 Identities=16% Similarity=0.102 Sum_probs=158.7
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCch-HHHHHHcCCCCCCCEEEEecC-CCCCCcHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPK-VELRRELGMDEDLPAVLLMGG-GEGMGPIEATA 369 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~-~~~r~~lgi~~~~~~il~~gg-~~g~k~~~~~l 369 (536)
.+.+|.++++|+..++.+.+.. .+++.+++|+++.+.+.+.... ...+....+.++.++++++|+ ....|+...++
T Consensus 154 ~~~ad~vi~~s~~~~~~~~~~~--~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll 231 (396)
T cd03818 154 LAQADAGVSPTRWQRSTFPAEL--RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFM 231 (396)
T ss_pred HHhCCEEECCCHHHHhhCcHhh--ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHH
Confidence 4678999999999998765532 3789999999998877654221 112222334566778888887 45567888888
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCC----------HHHH-HHHHcCC---CCCCEEEecCh--hhHHHHHhhcCeEEEC
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRN----------KKLA-NKLLSTD---WKIPVQVKGFV--SKMEEAMGACDCIITK 433 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~----------~~l~-~~l~~~~---~~~~V~~~G~v--~~l~~ll~~aDv~V~~ 433 (536)
+++..... ..++++++++++.+ +.+. +.+++.. ..++|+|+|++ +++.++|+.||++|.+
T Consensus 232 ~a~~~l~~----~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~ 307 (396)
T cd03818 232 RALPRLLR----ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYL 307 (396)
T ss_pred HHHHHHHH----HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEc
Confidence 87765443 25778766654321 1122 2233332 24689999998 4899999999999999
Q ss_pred C---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 434 A---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 434 s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
| + +.+++|||+||+|||+++.++..+ ++++ ..|.+++ |+++++++|.++++ +++.+++|+++|++.
T Consensus 308 s~~e~~~~~llEAmA~G~PVIas~~~g~~e------~i~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~l~~~ar~~ 380 (396)
T cd03818 308 TYPFVLSWSLLEAMACGCLVVGSDTAPVRE------VITDGENGLLVDFFDPDALAAAVIELLD-DPARRARLRRAARRT 380 (396)
T ss_pred CcccccchHHHHHHHCCCCEEEcCCCCchh------hcccCCceEEcCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 8 3 689999999999999998755443 4444 4677764 89999999999999 999999999999998
Q ss_pred cCC-chHHHHHHHHH
Q 036427 507 ARP-DAVFRIVQDLH 520 (536)
Q Consensus 507 a~~-~~~~~i~~~i~ 520 (536)
+.+ ++++++++.++
T Consensus 381 ~~~~fs~~~~~~~~~ 395 (396)
T cd03818 381 ALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHhccHHHHHHHHh
Confidence 866 88888887765
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-21 Score=201.69 Aligned_cols=328 Identities=14% Similarity=0.075 Sum_probs=222.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
|||+++...+.|.......+++.|.++ |++|.+.+.............. ....... ..
T Consensus 1 ki~~~~~~~~~~~~~~~~~~~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~-------~~~~~~~---------~~--- 58 (355)
T cd03799 1 KIAYLVKEFPRLSETFILREILALEAA---GHEVEIFSLRPPEDTLVHPEDR-------AELARTR---------YL--- 58 (355)
T ss_pred CEEEECCCCCCcchHHHHHHHHHHHhC---CCeEEEEEecCccccccccccc-------ccccchH---------HH---
Confidence 799999887777889999999999998 8888777643321110000000 0000000 00
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc------ccccccccCCEEE
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC------HPTWFHKLVTRCY 299 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~------~~~~~~~~~d~vi 299 (536)
............+.+.+++.+||+||++................ .+|++...+..... ..++..+.+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 135 (355)
T cd03799 59 ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLG---GIPYSFTAHGKDIFRSPDAIDLDEKLARADFVV 135 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhc---CCCEEEEEecccccccCchHHHHHHHhhCCEEE
Confidence 01112223344666777889999999987643332222222221 36776555532211 1133456799999
Q ss_pred EcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 300 CPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 300 ~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+.|+..++.+.+. +.+..++.+++|+++...+.+.. .....+...++++|+....++...+++++.....
T Consensus 136 ~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~--------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~- 206 (355)
T cd03799 136 AISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP--------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD- 206 (355)
T ss_pred ECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc--------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh-
Confidence 9999999999886 67788999999999877665432 0122345667788877667777777776654332
Q ss_pred cccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---------C-hHHHHHHH
Q 036427 379 ENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---------G-PGTIAEAM 443 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---------G-~~tllEAm 443 (536)
..+++++ +++|.++ ++.+.+++.+..++|.+.|++ +++..+|+.||++++|+ | |++++|||
T Consensus 207 ---~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~ 282 (355)
T cd03799 207 ---RGIDFRL-DIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAM 282 (355)
T ss_pred ---cCCCeEE-EEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHH
Confidence 2356665 4456654 445556666777899999998 58999999999999975 2 78999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQD 518 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~ 518 (536)
++|+|+|+++.++..+ +++.+ .|.++. |+++++++|..+++ +++.+.+|++++++.+ ..++++.+++.
T Consensus 283 a~G~Pvi~~~~~~~~~------~i~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 283 AMGLPVISTDVSGIPE------LVEDGETGLLVPPGDPEALADAIERLLD-DPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HcCCCEEecCCCCcch------hhhCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 9999999988654333 55555 777774 89999999999999 9999999999999876 45788877654
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-22 Score=205.40 Aligned_cols=350 Identities=17% Similarity=0.131 Sum_probs=221.7
Q ss_pred eEEEEeCCCC---chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDTG---GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~G---gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||||++...+ ||+..++..++++|.+. |++|.++.............. ... ........+............
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKR---GHEVTVITGSPNYPSGKIYKG-YKR-EEVDGVRVHRVPLPPYKKNGL 75 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhC---CceEEEEecCCCccccccccc-ceE-EecCCeEEEEEecCCCCccch
Confidence 7899986533 69999999999999998 788877654332111110000 000 000000111111000000000
Q ss_pred cchhhhhhhHHHHHHHHHHH--HhhCCCEEEEcCcc-cchHHHHHHHHcCCCCCceEEEEecCCCCcc------------
Q 036427 223 HQSNFAATSTFIAREVAKGL--MKYQPDIIISVHPL-MQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------ 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l--~~~kPDvVi~~~~~-~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------ 287 (536)
... ..............+ +..+||+|+++.+. ....+....++.. ++|++...+|.....
T Consensus 76 ~~~--~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~ 150 (394)
T cd03794 76 LKR--LLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLK---GAPFVLEVRDLWPESAVALGLLKNGSL 150 (394)
T ss_pred HHH--HHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhc---CCCEEEEehhhcchhHHHccCccccch
Confidence 000 001111222333334 47899999999833 2222222222221 378887777643100
Q ss_pred --------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC
Q 036427 288 --------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG 359 (536)
Q Consensus 288 --------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~ 359 (536)
.++..+.+|.+++.|+...+.+...+.+..++.++++++++..+.+...... +..+....+...++++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 151 LYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADES-LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhh-hhhccCCCCcEEEEEecCc
Confidence 0234578899999999999998867788889999999998876654432222 3444455566677777776
Q ss_pred CCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH---HHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC
Q 036427 360 EGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK---LANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA 434 (536)
Q Consensus 360 ~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~---l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s 434 (536)
...++...+++++..... .+++++ +++|.+.. +.+.+.... .++|.+.|++ +++.++|+.||++|+++
T Consensus 230 ~~~k~~~~l~~~~~~l~~-----~~~~~l-~i~G~~~~~~~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~~di~i~~~ 302 (394)
T cd03794 230 GRAQGLDTLLEAAALLKD-----RPDIRF-LIVGDGPEKEELKELAKALG-LDNVTFLGRVPKEELPELLAAADVGLVPL 302 (394)
T ss_pred ccccCHHHHHHHHHHHhh-----cCCeEE-EEeCCcccHHHHHHHHHHcC-CCcEEEeCCCChHHHHHHHHhhCeeEEec
Confidence 666777777776654432 245664 55676652 223222333 3689999988 48999999999999986
Q ss_pred C---------hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 435 G---------PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 435 G---------~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
. |.+++|||++|+|||+++.++..+. +.+.+.|.++. |+++++++|.++++ +++.+++|++++
T Consensus 303 ~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~-----~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~~ 376 (394)
T cd03794 303 KPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL-----VEEAGAGLVVPPGDPEALAAAILELLD-DPEERAEMGENG 376 (394)
T ss_pred cCcccccccCchHHHHHHHCCCcEEEecCCCchhh-----hccCCcceEeCCCCHHHHHHHHHHHHh-ChHHHHHHHHHH
Confidence 1 5678999999999999997665442 44446677664 89999999999999 999999999999
Q ss_pred HHhcC-CchHHHHHHHH
Q 036427 504 LKLAR-PDAVFRIVQDL 519 (536)
Q Consensus 504 ~~~a~-~~~~~~i~~~i 519 (536)
++++. .++++++++.+
T Consensus 377 ~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 377 RRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHhhcHHHHHHhc
Confidence 99887 68999888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-21 Score=216.17 Aligned_cols=278 Identities=17% Similarity=0.157 Sum_probs=187.2
Q ss_pred HHHHHHHHHHH-h--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------------c------
Q 036427 233 FIAREVAKGLM-K--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------------H------ 287 (536)
Q Consensus 233 ~~~~~l~~~l~-~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------------~------ 287 (536)
.+...+.+.+. + .+||+||++......+...++++.| +|++.+.|.+... +
T Consensus 369 ~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lg----VP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ 444 (784)
T TIGR02470 369 TFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLG----VTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFT 444 (784)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcC----CCEEEECCcchhhcccccccccccchhHHHhhhhhh
Confidence 34445555443 2 3699999987544344444555555 8987665533210 0
Q ss_pred -cccccccCCEEEEcCHHHHH----HHHHh----------------CC--CCCCEEEeCCCCCCCCCCCCCchH------
Q 036427 288 -PTWFHKLVTRCYCPTADVAK----RAMKA----------------GL--QASQIKVYGLPVRPSFVKPVRPKV------ 338 (536)
Q Consensus 288 -~~~~~~~~d~vi~~S~~~~~----~l~~~----------------g~--~~~ki~vignpv~~~~~~~~~~~~------ 338 (536)
..+....+|.+++.+..... .+..| |+ +..|+.++++++|...+.+.....
T Consensus 445 ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~ 524 (784)
T TIGR02470 445 ADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNL 524 (784)
T ss_pred HHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhh
Confidence 01234458999999875432 11111 23 457899999999988665432211
Q ss_pred ------------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------
Q 036427 339 ------------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------- 396 (536)
Q Consensus 339 ------------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------- 396 (536)
+.++.+|+ ++++++|+++|+....|++..+++++.+.-. ..++.++++++|...
T Consensus 525 ~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~----l~~~~~LVIVGGg~~~~~s~d~e 600 (784)
T TIGR02470 525 HPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK----LRELVNLVVVAGKLDAKESKDRE 600 (784)
T ss_pred hcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh----hCCCeEEEEEeCCcccccccchh
Confidence 12356665 5678899999998888998888888764311 124466666655321
Q ss_pred ------HHHHHHHcCCCCCCEEEecCh---hhHHHHHh----hcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccc
Q 036427 397 ------KLANKLLSTDWKIPVQVKGFV---SKMEEAMG----ACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 397 ------~l~~~l~~~~~~~~V~~~G~v---~~l~~ll~----~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e 459 (536)
++.+.+++.++..+|.|+|+. .+..++|+ .+|++|+|| .|+|++|||+||+|||+++.++..+
T Consensus 601 e~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~E 680 (784)
T TIGR02470 601 EQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLE 680 (784)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHH
Confidence 122344566788899999975 24555664 347999998 4899999999999999999655433
Q ss_pred cCChhhHhhCCceeecC--CHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHh
Q 036427 460 AGNVPYVVENGCGKFSK--SPKEIANMVSQWF----GPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVR 524 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~--d~~~La~~I~~ll----~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~ 524 (536)
. +.+...|++++ |+++++++|.+++ . |++.+++|+++|++.+ +.++|+++++.++++..
T Consensus 681 i-----V~dg~tGfLVdp~D~eaLA~aL~~ll~kll~-dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~~ 746 (784)
T TIGR02470 681 I-----IQDGVSGFHIDPYHGEEAAEKIVDFFEKCDE-DPSYWQKISQGGLQRIYEKYTWKIYSERLLTLAG 746 (784)
T ss_pred H-----hcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2 44445577775 8999999999875 6 8999999999999876 66899999999987663
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-22 Score=201.78 Aligned_cols=322 Identities=17% Similarity=0.193 Sum_probs=213.4
Q ss_pred eEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++... +||+.+.+..++++|.+. |++|.+............ ...... ....... .
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~---g~~v~v~~~~~~~~~~~~--~~~~~~----~~~~~~~-~---------- 60 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKR---GYDVTLVVLRDEGDYLEL--LPSNVK----LIPVRVL-K---------- 60 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhc---CceEEEEEcCCCCccccc--cccchh----hhceeee-e----------
Confidence 789988764 689999999999999887 788877654332111100 000000 0000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKL 294 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~ 294 (536)
............+.+++++.+||+|+++......+...+..+. ++|.+...++..... ..+..+.
T Consensus 61 -~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (353)
T cd03811 61 -LKSLRDLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARL----GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRR 135 (353)
T ss_pred -cccccchhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhc----CCceEEEEcCcchhhhccchhHHHHHHhhccc
Confidence 0001122334577888999999999999872212212222221 378887777654211 1234578
Q ss_pred CCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+|.+++.|+..++.+.+.+ .+..++.+++++++...+........ .+....+..+++++|+....++...+++++.
T Consensus 136 ~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 212 (353)
T cd03811 136 ADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL---ELGIPPDGPVILAVGRLSPQKGFDTLIRAFA 212 (353)
T ss_pred cceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh---hcCCCCCceEEEEEecchhhcChHHHHHHHH
Confidence 9999999999999988864 34678999999999876654322211 3445566677888888766677666666665
Q ss_pred HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 374 NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
.... ..+++++ +++|.++ .+.+.+++.+..++|.+.|+.+++.++|+.||++|.|+ | |++++|||++|
T Consensus 213 ~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G 287 (353)
T cd03811 213 LLRK----EGPDARL-VILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALG 287 (353)
T ss_pred Hhhh----cCCCceE-EEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhC
Confidence 4332 2356665 4456654 34456666777889999999999999999999999997 3 89999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC--CHHHH---HHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEI---ANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~L---a~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
+|||+++.++..+ .+.+...|.+++ +++++ .+.+..+.+ +++.++++++++++.
T Consensus 288 ~PvI~~~~~~~~e-----~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~ 346 (353)
T cd03811 288 TPVVATDCPGPRE-----ILEDGENGLLVPVGDEAALAAAALALLDLLL-DPELRERLAAAARER 346 (353)
T ss_pred CCEEEcCCCChHH-----HhcCCCceEEECCCCHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 9999998654333 244445566664 67777 778888888 899999999866554
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-21 Score=207.93 Aligned_cols=359 Identities=15% Similarity=0.092 Sum_probs=224.6
Q ss_pred CCceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc-chhHH-HHHHh--hcccccee-ec
Q 036427 143 QPKKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ-LPRSY-NFLVK--HGPLWKMT-YY 215 (536)
Q Consensus 143 ~~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~-~~~~y-~~~~~--~~~l~~~~-~~ 215 (536)
++++|+|+.++ .|||.++.....+.+|.++ +++++|.+.+..-+... .. +.... .+-.+ ..+.+..+ ..
T Consensus 32 ~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~-~~~~~v~iyt~~~d~~~---~~~l~~~~~~~~i~~~~~~~~v~l~~~ 107 (463)
T PLN02949 32 RKRAVGFFHPYTNDGGGGERVLWCAVRAIQEE-NPDLDCVIYTGDHDASP---DSLAARARDRFGVELLSPPKVVHLRKR 107 (463)
T ss_pred CCcEEEEECCCCCCCCChhhHHHHHHHHHHhh-CCCCeEEEEcCCCCCCH---HHHHHHHHhhcceecCCCceEEEeccc
Confidence 45699999865 6679999999999999998 44557777654322111 01 00000 00000 00101101 00
Q ss_pred C-CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CCCC-------
Q 036427 216 G-TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DLST------- 285 (536)
Q Consensus 216 ~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~~~------- 285 (536)
. ..+..+.................+.+.+..||+++-+..+...+|+ ++..+ .|++.++| +...
T Consensus 108 ~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl--~~~~~----~~v~~yvH~p~~~~dm~~~v~ 181 (463)
T PLN02949 108 KWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPL--ARLFG----CKVVCYTHYPTISSDMISRVR 181 (463)
T ss_pred cccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHH--HHhcC----CcEEEEEeCCcchHHHHHHHh
Confidence 0 0000000100111111122222233444678877655554444444 34333 67776665 2110
Q ss_pred ------------c-----------c-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC
Q 036427 286 ------------C-----------H-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR 335 (536)
Q Consensus 286 ------------~-----------~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~ 335 (536)
. + ..+..+.+|.+++.|+.+++.+.+....+.++.++++|++...+....
T Consensus 182 ~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~ 261 (463)
T PLN02949 182 DRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALP 261 (463)
T ss_pred hcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCC
Confidence 0 0 011236789999999999999877543346789999998764332111
Q ss_pred chHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---------HHHHHHHHcCC
Q 036427 336 PKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---------KKLANKLLSTD 406 (536)
Q Consensus 336 ~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---------~~l~~~l~~~~ 406 (536)
.+ .+++.+.++++|+....|+...+++++.+..++.....++++++++ |.+ .++++..++.+
T Consensus 262 -~~-------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIv-G~~~~~~~~~~~~eL~~la~~l~ 332 (463)
T PLN02949 262 -LE-------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFV-GSCRNKEDEERLQKLKDRAKELG 332 (463)
T ss_pred -cc-------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEE-eCCCCcccHHHHHHHHHHHHHcC
Confidence 00 1134567888998888888888888876544311111356765554 542 13455566778
Q ss_pred CCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecC
Q 036427 407 WKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSK 476 (536)
Q Consensus 407 ~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~ 476 (536)
+.++|+|+|++ +++.++|+.||+++.++ + |++++|||++|+|||+++.++..++ ++. ...|++++
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e-----IV~~~~~g~tG~l~~ 407 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD-----IVLDEDGQQTGFLAT 407 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce-----eeecCCCCcccccCC
Confidence 88999999998 58999999999999987 3 8999999999999999997653222 322 23466778
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.++++++++.+++|+++|++.+.+++++++++.+.+.+++
T Consensus 408 ~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 408 TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999845788999999999999889999999999887765
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-23 Score=214.71 Aligned_cols=274 Identities=15% Similarity=0.111 Sum_probs=189.8
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-----------ccc-----------
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-----------CHP----------- 288 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-----------~~~----------- 288 (536)
+..+.+.+.+++++.++|+||++...+... ...+.. ++|++...+|... ...
T Consensus 89 ~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~--~~~~~~----~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
T TIGR03087 89 SRRLARWVNALLAAEPVDAIVVFSSAMAQY--VTPHVR----GVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLL 162 (397)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEecccccee--cccccc----CCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHH
Confidence 444566788888999999999987543211 111112 3777755554310 000
Q ss_pred ----ccccccCCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 289 ----TWFHKLVTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 289 ----~~~~~~~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+++.+.+|.++++|+..++.+.+.+ ..+.++.+++|+++.+.+.+..... ..+..+.++++++|+....+
T Consensus 163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~-----~~~~~~~~~ilf~G~l~~~k 237 (397)
T TIGR03087 163 LAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYP-----NPYPPGKRVLVFTGAMDYWP 237 (397)
T ss_pred HHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCcccc-----CCCCCCCcEEEEEEecCCcc
Confidence 1234689999999999999987753 4567899999999988765432111 11234557788888876667
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----C-hHH
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA----G-PGT 438 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s----G-~~t 438 (536)
+...++..+.+.+.......++++++ ++|.++. +.++++...++|+|+|+++++..+|+.||++|+|+ | +++
T Consensus 238 ~~~~l~~~~~~~~~~l~~~~p~~~l~-ivG~g~~--~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~ 314 (397)
T TIGR03087 238 NIDAVVWFAERVFPAVRARRPAAEFY-IVGAKPS--PAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNK 314 (397)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCcEEE-EECCCCh--HHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccH
Confidence 76554432222211111124777764 4576652 23444444568999999999999999999999986 4 678
Q ss_pred HHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHH
Q 036427 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIV 516 (536)
Q Consensus 439 llEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~ 516 (536)
++|||+||+|||+++..... .....+.|.++ .|+++++++|.++++ |++.+++|+++|++++ +.++|++++
T Consensus 315 ~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~~~~~~la~ai~~ll~-~~~~~~~~~~~ar~~v~~~fsw~~~~ 387 (397)
T TIGR03087 315 VLEAMAMAKPVVASPEAAEG------IDALPGAELLVAADPADFAAAILALLA-NPAEREELGQAARRRVLQHYHWPRNL 387 (397)
T ss_pred HHHHHHcCCCEEecCccccc------ccccCCcceEeCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999853211 12234566665 499999999999999 9999999999999987 568999999
Q ss_pred HHHHHHHhh
Q 036427 517 QDLHELVRQ 525 (536)
Q Consensus 517 ~~i~~l~~~ 525 (536)
+.+.+++++
T Consensus 388 ~~~~~~l~~ 396 (397)
T TIGR03087 388 ARLDALLEQ 396 (397)
T ss_pred HHHHHHhcC
Confidence 999998754
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=209.71 Aligned_cols=341 Identities=13% Similarity=0.082 Sum_probs=212.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccc--cCC----CCCCcchhHHHHHHhhccccceeecCC
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSD--HTP----WPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~--~~~----~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.||+|.++++ |||..++ +|+++|+++ +.++.+. ..... ..+ +++..+. ...+..
T Consensus 6 ~ki~i~aGgt-sGhi~pa-al~~~l~~~---~~~~~~~g~gg~~m~~~g~~~~~~~~~l~--------v~G~~~------ 66 (385)
T TIGR00215 6 PTIALVAGEA-SGDILGA-GLRQQLKEH---YPNARFIGVAGPRMAAEGCEVLYSMEELS--------VMGLRE------ 66 (385)
T ss_pred CeEEEEeCCc-cHHHHHH-HHHHHHHhc---CCCcEEEEEccHHHHhCcCccccChHHhh--------hccHHH------
Confidence 5899999999 7999999 999999987 4555433 22111 111 1111110 000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC---cccccccc
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST---CHPTWFHK 293 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~---~~~~~~~~ 293 (536)
..+ .........+++.+++++++||+|++++. .. .|+.+++..... ++|++.++. ..+. ...+.+.+
T Consensus 67 ----~l~--~~~~~~~~~~~~~~~l~~~kPd~vi~~g~-~~-~~~~~a~aa~~~-gip~v~~i~P~~waw~~~~~r~l~~ 137 (385)
T TIGR00215 67 ----VLG--RLGRLLKIRKEVVQLAKQAKPDLLVGIDA-PD-FNLTKELKKKDP-GIKIIYYISPQVWAWRKWRAKKIEK 137 (385)
T ss_pred ----HHH--HHHHHHHHHHHHHHHHHhcCCCEEEEeCC-CC-ccHHHHHHHhhC-CCCEEEEeCCcHhhcCcchHHHHHH
Confidence 000 11122334458888999999999999884 32 233332222222 389876543 2121 12246778
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.+|.+++.++...+.+.++|. +..++|||+.+........+.+.+++++++++.+++++++|+.+.+ ..+.+..+.
T Consensus 138 ~~d~v~~~~~~e~~~~~~~g~---~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~ae-i~k~~~~ll 213 (385)
T TIGR00215 138 ATDFLLAILPFEKAFYQKKNV---PCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSE-VEKLFPLFL 213 (385)
T ss_pred HHhHhhccCCCcHHHHHhcCC---CEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHH-HHHhHHHHH
Confidence 999999999999888876654 4678999997765432123556788899998889998899887653 233333333
Q ss_pred HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEE
Q 036427 374 NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPII 450 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI 450 (536)
+++.......++.++++..+.+. .+.+..+.++...++.+.+ .++.++|+.||++|++||..|+ |+|++|+|+|
T Consensus 214 ~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~V 290 (385)
T TIGR00215 214 KAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID--GDARKAMFAADAALLASGTAAL-EAALIKTPMV 290 (385)
T ss_pred HHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC--chHHHHHHhCCEEeecCCHHHH-HHHHcCCCEE
Confidence 22221111246666655444432 2333333344444565544 3678899999999999997666 9999999999
Q ss_pred Eec----cC---Ccc-----ccCChhhHhhCCceeec-C---CHHHHHHHHHHHhCCCH----HHHHHHHHHHHH----h
Q 036427 451 LND----FI---AGQ-----EAGNVPYVVENGCGKFS-K---SPKEIANMVSQWFGPKI----DELKAMSQNALK----L 506 (536)
Q Consensus 451 ~~~----~~---~~~-----e~~na~~lv~~g~g~~~-~---d~~~La~~I~~ll~~d~----~~~~~m~~~a~~----~ 506 (536)
++. .. +.+ +..++..+.+.+....+ . +++.|++.+.++++ |+ +.++++.+.-.+ +
T Consensus 291 v~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l 369 (385)
T TIGR00215 291 VGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRI 369 (385)
T ss_pred EEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHh
Confidence 993 32 111 44566666655544332 2 79999999999999 88 777777665443 3
Q ss_pred cCCchHHHHHHHHHH
Q 036427 507 ARPDAVFRIVQDLHE 521 (536)
Q Consensus 507 a~~~~~~~i~~~i~~ 521 (536)
..+.+.++.++.|.+
T Consensus 370 ~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 370 YCNADSERAAQAVLE 384 (385)
T ss_pred cCCCHHHHHHHHHhh
Confidence 455677888877754
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-21 Score=202.81 Aligned_cols=267 Identities=14% Similarity=0.102 Sum_probs=188.5
Q ss_pred HHHHHHHh---hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhC
Q 036427 237 EVAKGLMK---YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 237 ~l~~~l~~---~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
.+...+.. .++|+|+++..... ...+.++. .+.+++...|+.. .+ .....++.++++|+..++.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~vi~v~~~~~~--~~~~~~~~---~~~~~v~~~h~~~--~~-~~~~~~~~ii~~S~~~~~~~~~~- 157 (380)
T PRK15484 87 RILNIAHKFTITKDSVIVIHNSMKL--YRQIRERA---PQAKLVMHMHNAF--EP-ELLDKNAKIIVPSQFLKKFYEER- 157 (380)
T ss_pred HHHHHHHhcCCCCCcEEEEeCcHHh--HHHHHhhC---CCCCEEEEEeccc--Ch-hHhccCCEEEEcCHHHHHHHHhh-
Confidence 44444444 55899998874321 11222222 1356664444321 11 12346789999999999887764
Q ss_pred CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEec
Q 036427 314 LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICG 393 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G 393 (536)
.+..++.+++|+++...+.+. .....++.++++++.++++++|+....|+...+++++..... ..+++++++ +|
T Consensus 158 ~~~~~i~vIpngvd~~~~~~~-~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~----~~p~~~lvi-vG 231 (380)
T PRK15484 158 LPNADISIVPNGFCLETYQSN-PQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLAT----AHSNLKLVV-VG 231 (380)
T ss_pred CCCCCEEEecCCCCHHHcCCc-chHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHH----hCCCeEEEE-Ee
Confidence 466789999999998766543 244567788888777888888887777888888877765443 256777544 45
Q ss_pred CCH--------HHHHHHHcC--CCCCCEEEecCh--hhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEEeccCC
Q 036427 394 RNK--------KLANKLLST--DWKIPVQVKGFV--SKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 394 ~~~--------~l~~~l~~~--~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~~~~~~ 456 (536)
.+. .+.+.+++. ....++.|+|++ +++.++|+.||++|+|| | |++++|||+||+|||+++.++
T Consensus 232 ~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg 311 (380)
T PRK15484 232 DPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG 311 (380)
T ss_pred CCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC
Confidence 432 122233222 234689999997 48999999999999998 2 799999999999999999755
Q ss_pred ccccCChhhHhhC-Cceeec---CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhhc
Q 036427 457 GQEAGNVPYVVEN-GCGKFS---KSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 457 ~~e~~na~~lv~~-g~g~~~---~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~~ 526 (536)
..| ++.+ ..|..+ .|+++++++|..+++ |++. .+|++++++.+ +.++|+++++.++++++++
T Consensus 312 ~~E------iv~~~~~G~~l~~~~d~~~la~~I~~ll~-d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 312 ITE------FVLEGITGYHLAEPMTSDSIISDINRTLA-DPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred cHh------hcccCCceEEEeCCCCHHHHHHHHHHHHc-CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 443 4544 456533 389999999999999 8885 77999999865 6799999999999998764
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-21 Score=215.21 Aligned_cols=282 Identities=15% Similarity=0.076 Sum_probs=193.6
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchH-HHHHHHH--cCCCCCceEEEEecCCCC--c-----------------ccc
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHV-PLRILRA--KGLLKKIVFTTVITDLST--C-----------------HPT 289 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i-~~~~~~~--~g~~~~ip~v~~~~d~~~--~-----------------~~~ 289 (536)
+.+...+++.+ ++|||||+|..-...+ |++.... .+. .+++.+..+|.+.. . .+.
T Consensus 596 FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~-~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d 674 (977)
T PLN02939 596 FSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF-NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPD 674 (977)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC-CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChh
Confidence 44555566665 6999999987554443 3332111 232 34787777765431 0 010
Q ss_pred cc--------------cccCCEEEEcCHHHHHHHHHh---------CCCCCCEEEeCCCCCCCCCCCCCc----------
Q 036427 290 WF--------------HKLVTRCYCPTADVAKRAMKA---------GLQASQIKVYGLPVRPSFVKPVRP---------- 336 (536)
Q Consensus 290 ~~--------------~~~~d~vi~~S~~~~~~l~~~---------g~~~~ki~vignpv~~~~~~~~~~---------- 336 (536)
++ ...+|.|+++|+..++.+... +..+.++.+|+|++|.+.+.|..+
T Consensus 675 ~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~ 754 (977)
T PLN02939 675 RMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNAN 754 (977)
T ss_pred hhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChh
Confidence 10 125799999999999987652 234678999999999987765532
Q ss_pred --------hHHHHHHcCCCC---CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH------HHH
Q 036427 337 --------KVELRRELGMDE---DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK------KLA 399 (536)
Q Consensus 337 --------~~~~r~~lgi~~---~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------~l~ 399 (536)
+..+++++|++. +.++|+++|+....|++..++.++...+. ++.++ +++|.|+ .+.
T Consensus 755 dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~------~dvqL-VIvGdGp~~~~e~eL~ 827 (977)
T PLN02939 755 DLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE------LGGQF-VLLGSSPVPHIQREFE 827 (977)
T ss_pred hhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh------cCCEE-EEEeCCCcHHHHHHHH
Confidence 456889999974 46888899998888888877777755432 35665 5567663 223
Q ss_pred HHHHcCCCCCCEEEecChhh--HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccC---ChhhH-hhC
Q 036427 400 NKLLSTDWKIPVQVKGFVSK--MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAG---NVPYV-VEN 469 (536)
Q Consensus 400 ~~l~~~~~~~~V~~~G~v~~--l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~---na~~l-v~~ 469 (536)
+..+.+...++|.|+|+.++ ...+|+.||++|+|| + |++++|||+||+|+|+++.++..+.- +...+ .+.
T Consensus 828 ~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg 907 (977)
T PLN02939 828 GIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL 907 (977)
T ss_pred HHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC
Confidence 33444566778999998864 357999999999998 3 89999999999999999877654420 00001 112
Q ss_pred CceeecC--CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 470 GCGKFSK--SPKEIANMVSQWFG---PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 470 g~g~~~~--d~~~La~~I~~ll~---~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+.|+++. |+++|+++|.+++. .+++.+++|++++.. ..++|+++++.+.+++++
T Consensus 908 ~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 908 RNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQR 966 (977)
T ss_pred CceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 4566664 89999998887653 278999999987653 678999999888776653
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-22 Score=213.94 Aligned_cols=277 Identities=19% Similarity=0.168 Sum_probs=192.2
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC--ccc---------------------
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST--CHP--------------------- 288 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~--~~~--------------------- 288 (536)
+.....+++++ .+||+||++......++..+.+..+.. ++|++..+|++.. ..+
T Consensus 114 f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~-~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
T TIGR02095 114 FSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPN-PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEF 192 (473)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCC-CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhc
Confidence 34455555554 689999999754433344333333211 3788877775431 000
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHHh----CC------CCCCEEEeCCCCCCCCCCCCCc---------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMKA----GL------QASQIKVYGLPVRPSFVKPVRP--------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~~----g~------~~~ki~vignpv~~~~~~~~~~--------------- 336 (536)
+...+.+|.++++|+..++.+... ++ ++.++.+++|++|.+.+.+..+
T Consensus 193 ~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k 272 (473)
T TIGR02095 193 YGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGK 272 (473)
T ss_pred CCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhh
Confidence 112467899999999998887642 22 3568999999999887765321
Q ss_pred ---hHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCC
Q 036427 337 ---KVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWK 408 (536)
Q Consensus 337 ---~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~ 408 (536)
+..+++++|++. +.++++++|+....|++..+++++.+... .++++ +++|.++ ++.+.++++ ...
T Consensus 273 ~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-vi~G~g~~~~~~~l~~~~~~~~ 345 (473)
T TIGR02095 273 AENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE------LGGQL-VVLGTGDPELEEALRELAERYP 345 (473)
T ss_pred hhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH------cCcEE-EEECCCCHHHHHHHHHHHHHCC
Confidence 345788899976 67889999998888888877777765432 34665 5567763 333333322 233
Q ss_pred CCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------CceeecC
Q 036427 409 IPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGKFSK 476 (536)
Q Consensus 409 ~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~~~~ 476 (536)
.++.+.+.. +++..+|+.||++++|| + |.+++|||+||+|+|+++.++..+. +.+. +.|++++
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~-----v~~~~~~~~~~~G~l~~ 420 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT-----VVDGDPEAESGTGFLFE 420 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce-----EecCCCCCCCCceEEeC
Confidence 567776554 35678999999999998 3 7999999999999999997665442 3333 6677764
Q ss_pred --CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 --SPKEIANMVSQWFG---PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 --d~~~La~~I~~ll~---~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.+++. .+++.+++|++++. .+.++|+++++.+.+++++
T Consensus 421 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 421 EYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 89999999988775 26788899998885 3679999999999988764
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-21 Score=197.16 Aligned_cols=347 Identities=18% Similarity=0.162 Sum_probs=226.3
Q ss_pred EEEEeCC--C--CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 147 VLILMSD--T--GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 147 IL~~~~~--~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++.. . .||+......++++|.+. |++|.+.+................ .......... ...
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~---g~~v~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------~~~ 67 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKR---GVEVTVLAPGPWGPKLLDLLKGRL----VGVERLPVLL------PVV 67 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHC---CCceEEEecCCCCCCchhhccccc----ccccccccCc------chh
Confidence 4566532 2 489999999999999988 788877754332111100000000 0000000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHH--hhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCcc----------cc
Q 036427 223 HQSNFAATSTFIAREVAKGLM--KYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTCH----------PT 289 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~--~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~ 289 (536)
...............+.+.++ ..+||+|+++.+...... ....+..+ +|++...++..... .+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~ 143 (377)
T cd03798 68 PLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLG----IPLVVTLHGSDVNLLPRKRLLRALLR 143 (377)
T ss_pred hccccchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcC----CCEEEEeecchhcccCchhhHHHHHH
Confidence 000011123345567778888 999999999876544322 22223222 78877666543211 12
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
+..+.+|.+++.|+..++.+.+.+.+..++.+++++++...+.+...... .++....+.+.++++|+....++...++
T Consensus 144 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 144 RALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA--RKLGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH--HhccCCCCceEEEEeccCccccCHHHHH
Confidence 34678999999999999999887777889999999999887665432222 3445556677788888877777777777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----ChHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA----GPGTIA 440 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G~~tll 440 (536)
+++..... ..+++++ +++|.+. .+.+.++..+...+|.+.|++ +++.++|..||+++.++ +|.+++
T Consensus 222 ~~~~~~~~----~~~~~~l-~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~ 296 (377)
T cd03798 222 EALARLLK----KRPDVHL-VIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLL 296 (377)
T ss_pred HHHHHHHh----cCCCeEE-EEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHH
Confidence 66654432 2355654 5567654 334555556777899999998 47899999999999987 389999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQ 517 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~ 517 (536)
|||++|+|+|+++.++..+ .+.+.+.|.++. |+++++++|.++++ +++. ++..++++. .+.++++.+++
T Consensus 297 Ea~~~G~pvI~~~~~~~~~-----~~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~--~~~~~~~~~~~~~~s~~~~~~ 368 (377)
T cd03798 297 EAMACGLPVVATDVGGIPE-----IITDGENGLLVPPGDPEALAEAILRLLA-DPWL--RLGRAARRRVAERFSWENVAE 368 (377)
T ss_pred HHHhcCCCEEEecCCChHH-----HhcCCcceeEECCCCHHHHHHHHHHHhc-CcHH--HHhHHHHHHHHHHhhHHHHHH
Confidence 9999999999988654333 233444456654 89999999999999 8776 566666554 45688999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++++
T Consensus 369 ~~~~~~~~ 376 (377)
T cd03798 369 RLLELYRE 376 (377)
T ss_pred HHHHHHhh
Confidence 99888764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-22 Score=204.69 Aligned_cols=331 Identities=16% Similarity=0.143 Sum_probs=218.8
Q ss_pred eEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||+|.+.. ..||..+.+..|+++|.+. ++++.+................ . ... .+.... ...
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~---~~~v~~~~~~~~~~~~~~~~~~-~----~~~--~~~~~~----~~~ 66 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKL---DPEEVLLLLPGAPGLLLLPLRA-A----LRL--LLRLPR----RLL 66 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhc---CCceEEEEecCccccccccchh-c----ccc--cccccc----ccc
Confidence 67877622 3589999999999999997 5555444322111110000000 0 000 000000 000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-c------------
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-P------------ 288 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-~------------ 288 (536)
. .............+.+.+||+||++....... +.. ++|++...+|+.... +
T Consensus 67 ~------~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~-----~~~----~~~~i~~~hd~~~~~~~~~~~~~~~~~~~ 131 (365)
T cd03809 67 W------GLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL-----RLR----GVPVVVTIHDLIPLRFPEYFSPGFRRYFR 131 (365)
T ss_pred c------chhhHHHHHHHHHhhhcCCCeeeecccccCcc-----cCC----CCCEEEEeccchhhhCcccCCHHHHHHHH
Confidence 0 01111122334445668999999988654321 222 388888877754211 0
Q ss_pred ---ccccccCCEEEEcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 289 ---TWFHKLVTRCYCPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 289 ---~~~~~~~d~vi~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
....+.+|.++++|+..++.+.+. +.+..++.+++++++...+....... +.......+.+.++++|+....++
T Consensus 132 ~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~~K~ 209 (365)
T cd03809 132 RLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE--VLRALYLLPRPYFLYVGTIEPRKN 209 (365)
T ss_pred HHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH--HHHHhcCCCCCeEEEeCCCccccC
Confidence 223567899999999999998875 45678899999999988765543222 334445566778888888777777
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G 435 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G 435 (536)
...+++++..... ..++.++ +++|.+. ...+.+++.+...+|++.|++ +++.++|+.||+++.|+ |
T Consensus 210 ~~~~l~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~ 284 (365)
T cd03809 210 LERLLEAFARLPA----KGPDPKL-VIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEG 284 (365)
T ss_pred HHHHHHHHHHHHH----hcCCCCE-EEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhcc
Confidence 7777777765443 2334555 4445433 222333456778899999999 58999999999999997 3
Q ss_pred -hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchH
Q 036427 436 -PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAV 512 (536)
Q Consensus 436 -~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~ 512 (536)
+++++|||++|+|||+++.++..+ ++.. .|.++ .|+++++++|.++++ +++.+.+|++++++.+..++|
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~~~~e------~~~~-~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~sw 356 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNISSLPE------VAGD-AALYFDPLDPEALAAAIERLLE-DPALREELRERGLARAKRFSW 356 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCCCccc------eecC-ceeeeCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCCH
Confidence 889999999999999998755444 3322 23333 489999999999999 999999999999998999999
Q ss_pred HHHHHHHH
Q 036427 513 FRIVQDLH 520 (536)
Q Consensus 513 ~~i~~~i~ 520 (536)
+++++.+.
T Consensus 357 ~~~~~~~~ 364 (365)
T cd03809 357 EKTARRTL 364 (365)
T ss_pred HHHHHHHh
Confidence 99998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-21 Score=199.86 Aligned_cols=328 Identities=15% Similarity=0.101 Sum_probs=210.9
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++.. -.||....+..|+++|.+. |++|.+.......... .+ .....+......... ..
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~--~~- 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAAR---GIEVAVLCASPEPKGR-------DE--ERNGHRVIRAPSLLN--VA- 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhC---CCceEEEecCCCCcch-------hh--hccCceEEEeecccc--cc-
Confidence 68887632 1379999999999999998 7777776543221110 00 000001111000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC---------ccccccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST---------CHPTWFH 292 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~---------~~~~~~~ 292 (536)
.. .........+. ++..+||+||++.+............. ++|.+...+ +... ...+++.
T Consensus 66 --~~--~~~~~~~~~~~--~~~~~~Dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 135 (357)
T cd03795 66 --ST--PFSPSFFKQLK--KLAKKADVIHLHFPNPLADLALLLLPR----KKPVVVHWHSDIVKQKLLLKLYRPLQRRFL 135 (357)
T ss_pred --cc--cccHHHHHHHH--hcCCCCCEEEEecCcchHHHHHHHhcc----CceEEEEEcChhhccchhhhhhhHHHHHHH
Confidence 00 00111111111 567899999998876533222222211 366664444 3211 1113456
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
+.+|.+++.|+...+.+...+..+.++.+++|+++...+.+...... .....+.+.+.++++|+....++...+++++
T Consensus 136 ~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~--~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 213 (357)
T cd03795 136 RRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEE--AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAA 213 (357)
T ss_pred HhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhh--HhhcCCCCCcEEEEecccccccCHHHHHHHH
Confidence 78999999999999987765444478999999999876654322111 2233455677888888877777777766666
Q ss_pred HHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC-----C-hHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA-----G-PGTIAE 441 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s-----G-~~tllE 441 (536)
.+. .++.+ +++|.++ .+.+.+++.+...+|++.|+++ ++.++|+.||++++|+ | |.+++|
T Consensus 214 ~~l--------~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E 284 (357)
T cd03795 214 AAL--------PDAPL-VIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE 284 (357)
T ss_pred Hhc--------cCcEE-EEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence 532 14554 5557665 3344454667788999999985 6899999999999886 3 889999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRI 515 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i 515 (536)
||++|+|||+++.++..+. +.+ .+.|.++. |+++++++|..+++ +++.+++|++++++.+.+ ++++.+
T Consensus 285 a~~~g~Pvi~~~~~~~~~~-----i~~~~~~g~~~~~~d~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~ 356 (357)
T cd03795 285 AMAFGKPVISTEIGTGGSY-----VNLHGVTGLVVPPGDPAALAEAIRRLLE-DPELRERLGEAARERAEEEFTADRM 356 (357)
T ss_pred HHHcCCCEEecCCCCchhH-----HhhCCCceEEeCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHhcchHhh
Confidence 9999999999987655443 444 56677664 89999999999999 999999999999998754 565554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-21 Score=208.36 Aligned_cols=280 Identities=17% Similarity=0.134 Sum_probs=192.1
Q ss_pred HHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHc---CCCCCceEEEEecCCCCc-----------cc----------
Q 036427 235 AREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAK---GLLKKIVFTTVITDLSTC-----------HP---------- 288 (536)
Q Consensus 235 ~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~d~~~~-----------~~---------- 288 (536)
.+...+++++ ++||+||+|.-....+|+.+.++. ....++|++..+|..... .+
T Consensus 128 ~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~ 207 (489)
T PRK14098 128 NVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHRE 207 (489)
T ss_pred HHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhc
Confidence 3444455554 689999999633333344443322 112358988776653210 00
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHHh-----CCC------CCCEEEeCCCCCCCCCCCCCc--------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMKA-----GLQ------ASQIKVYGLPVRPSFVKPVRP-------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~~-----g~~------~~ki~vignpv~~~~~~~~~~-------------- 336 (536)
+.....+|.++++|+..++.+... |++ +.++.+|+|++|.+.+.+..+
T Consensus 208 ~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~ 287 (489)
T PRK14098 208 GDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDG 287 (489)
T ss_pred CCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhh
Confidence 012367899999999999987652 443 578999999999987765432
Q ss_pred ----hHHHHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CC
Q 036427 337 ----KVELRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DW 407 (536)
Q Consensus 337 ----~~~~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~ 407 (536)
+..+++++|++ ++.++++++|+....|++..+++++.+... +++++ +++|.++ ++.+.++++ ..
T Consensus 288 k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~------~~~~l-vivG~G~~~~~~~l~~l~~~~ 360 (489)
T PRK14098 288 KLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE------LDIQL-VICGSGDKEYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh------cCcEE-EEEeCCCHHHHHHHHHHHHHC
Confidence 33567788886 356788888888888888877777765432 35665 5556664 233333322 23
Q ss_pred CCCEEEecChh--hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHH
Q 036427 408 KIPVQVKGFVS--KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPK 479 (536)
Q Consensus 408 ~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~ 479 (536)
..+|.+.|..+ ++..+|+.||++++|| + |++.+|||+||+|+|+++.++..+. ......+.+.|++++ |++
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~-v~~~~~~~~~G~l~~~~d~~ 439 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVET-IEEVSEDKGSGFIFHDYTPE 439 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCcee-eecCCCCCCceeEeCCCCHH
Confidence 46899999874 5689999999999998 3 8999999999999999987665442 000011245677764 899
Q ss_pred HHHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 480 EIANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 480 ~La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+|+++|.+++ + +++.+++|++++. .+.++|+++++++.+++++
T Consensus 440 ~la~ai~~~l~~~~-~~~~~~~~~~~~~--~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 440 ALVAKLGEALALYH-DEERWEELVLEAM--ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred HHHHHHHHHHHHHc-CHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHH
Confidence 9999998754 6 7888888887663 4689999999999988865
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=203.13 Aligned_cols=344 Identities=17% Similarity=0.159 Sum_probs=217.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.. -+..-...+.++|.+..+-+++++++.... +....... .....+-+.+.... . .
T Consensus 1 ~~i~~~~gtr--~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~-------~~~~~~~~-~~~i~~~~~~~~~~-~-----~ 64 (365)
T TIGR00236 1 LKVSIVLGTR--PEAIKMAPLIRALKKYPEIDSYVIVTAQHR-------EMLDQVLD-LFHLPPDYDLNIMS-P-----G 64 (365)
T ss_pred CeEEEEEecC--HHHHHHHHHHHHHhhCCCCCEEEEEeCCCH-------HHHHHHHH-hcCCCCCeeeecCC-C-----C
Confidence 6999988775 667777788899987521133433332210 00100000 00111101100000 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCC---Cc-------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLS---TC-------HPTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~---~~-------~~~~~~~ 293 (536)
............++.+++++++||+||+++.....+ ...+++..| +|++.+..... .. .+.++.+
T Consensus 65 ~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~----ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~ 140 (365)
T TIGR00236 65 QTLGEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQ----IPVGHVEAGLRTGDRYSPMPEEINRQLTGH 140 (365)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhC----CCEEEEeCCCCcCCCCCCCccHHHHHHHHH
Confidence 011112233446888999999999999998765433 233445555 89876543211 00 1223456
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-C-CCchHHHHHHcCCCCCCCEEEEecCCCCC--CcHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK-P-VRPKVELRRELGMDEDLPAVLLMGGGEGM--GPIEATA 369 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~--k~~~~~l 369 (536)
.+|.++++++..++.+.+.|++++++.++||++.+.... . ......++++++. +.++++++++.... ++...++
T Consensus 141 ~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~~~~~k~~~~ll 218 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRYILLTLHRRENVGEPLENIF 218 (365)
T ss_pred HHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCEEEEecCchhhhhhHHHHHH
Confidence 789999999999999999999999999999997443221 1 1113455666652 34577777654321 3344455
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHH-cCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHHhC
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNKKLANKLL-STDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMIRG 446 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~-~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma~G 446 (536)
+++.+... ..++.+++++.+.+.+..+.+. ..+..++|.+++.++ ++..+|+.||+++++||+. ++|||++|
T Consensus 219 ~a~~~l~~----~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~~-~~EA~a~g 293 (365)
T TIGR00236 219 KAIREIVE----EFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSGGV-QEEAPSLG 293 (365)
T ss_pred HHHHHHHH----HCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECChhH-HHHHHHcC
Confidence 55443322 2456766555454443333232 234456899998764 6788999999999999754 69999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+|+|+++..++.+ .+++.|.++++. |++++++++.++++ +++.+++|+++...+.+.+++++|++.|.+
T Consensus 294 ~PvI~~~~~~~~~-----e~~~~g~~~lv~~d~~~i~~ai~~ll~-~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 294 KPVLVLRDTTERP-----ETVEAGTNKLVGTDKENITKAAKRLLT-DPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCEEECCCCCCCh-----HHHhcCceEEeCCCHHHHHHHHHHHHh-ChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9999986444333 266677777775 99999999999999 999999999888777778899999998876
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-21 Score=204.98 Aligned_cols=349 Identities=12% Similarity=0.023 Sum_probs=212.3
Q ss_pred eEEEEeC--CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCC-CCCCcchhHHHH-HHhhcccccee-e-cCCCc
Q 036427 146 KVLILMS--DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTP-WPFNQLPRSYNF-LVKHGPLWKMT-Y-YGTAP 219 (536)
Q Consensus 146 KIL~~~~--~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~-~~~~~~~~~y~~-~~~~~~l~~~~-~-~~~~~ 219 (536)
.|.|+.+ +.|||.++.....+.+|.++ +.+++|.+.+...+... .........+.. .......+... . .....
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~-~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKR-YPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEA 80 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHh-CCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeecc
Confidence 4677764 57789999999999999998 44678877765432210 000000000000 00000101100 0 00011
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC----C-c--------
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS----T-C-------- 286 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~----~-~-------- 286 (536)
..+.+...............+.+.+.+||+|+.+.++...+|+ ++... +.|++.++| +. . .
T Consensus 81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~--~~~~~---~~~~i~y~h-~P~~~~d~l~~~~~~~~ 154 (419)
T cd03806 81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL--VRLLG---GCPVGAYVH-YPTISTDMLQKVRSREA 154 (419)
T ss_pred ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH--HHHhc---CCeEEEEec-CCcchHHHHHHHhhccc
Confidence 1111111111111111122223345689999988766554443 33322 368877766 21 0 0
Q ss_pred ---------------------------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHH
Q 036427 287 ---------------------------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVE 339 (536)
Q Consensus 287 ---------------------------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~ 339 (536)
...|..+.+|.++++|+..++.+.+.+....++.++++|++.+.+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~--- 231 (419)
T cd03806 155 SYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL--- 231 (419)
T ss_pred cccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc---
Confidence 11234578999999999999998876433458999999998665432211
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc-CCCCcEEEEEecCCH---------HHHHHHHcCCCCC
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL-GEPIGQVLVICGRNK---------KLANKLLSTDWKI 409 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~-~~~~~~~lvi~G~~~---------~l~~~l~~~~~~~ 409 (536)
...++.+.++++|+....|+...+++++......... ..+++++++ +|.+. ++++..+++++.+
T Consensus 232 -----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvi-vG~~~~~~~~~~~~~L~~~~~~l~l~~ 305 (419)
T cd03806 232 -----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVL-IGSCRNEDDEKRVEDLKLLAKELGLED 305 (419)
T ss_pred -----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEE-EcCCCCcccHHHHHHHHHHHHHhCCCC
Confidence 0123456888999888888888888888755431100 012466544 45431 2344455667888
Q ss_pred CEEEecCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecCCHH
Q 036427 410 PVQVKGFV--SKMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSKSPK 479 (536)
Q Consensus 410 ~V~~~G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~d~~ 479 (536)
+|+|+|++ +++.++|+.||++|+++ .|.+++|||+||+|+|+++.++..++ +++ ..+|++++|++
T Consensus 306 ~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~-----iv~~~~~g~~G~l~~d~~ 380 (419)
T cd03806 306 KVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLD-----IVVPWDGGPTGFLASTAE 380 (419)
T ss_pred eEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchh-----eeeccCCCCceEEeCCHH
Confidence 99999997 58999999999999987 38999999999999999986543222 554 56788888999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHH
Q 036427 480 EIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRI 515 (536)
Q Consensus 480 ~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i 515 (536)
+++++|.++++++++.++.+++++++..+.+++++.
T Consensus 381 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 381 EYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 999999999983345566666666666666776654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-21 Score=197.32 Aligned_cols=331 Identities=16% Similarity=0.155 Sum_probs=210.2
Q ss_pred eEEEEeC----CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMS----DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~----~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||+|+.. ..+||....+..|++.|.++ |++|.|+......... ... ....+....... ....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~---g~~v~v~~~~~~~~~~-----~~~----~~~i~~~~~~~~--~~~~ 66 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVAR---GHEVTVYCRSPYPKQK-----ETE----YNGVRLIHIPAP--EIGG 66 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhc---CCCEEEEEccCCCCCc-----ccc----cCCceEEEcCCC--Cccc
Confidence 6888743 34589999999999999998 7788776543221110 000 000000000000 0000
Q ss_pred ccchhhhhhhHHHHHHHHHHH-HhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-------------
Q 036427 222 IHQSNFAATSTFIAREVAKGL-MKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------- 287 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l-~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------- 287 (536)
.. ........+.+.+ ++.++|+||...+.. ...+.+++..+ .|++...++.....
T Consensus 67 ~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~ 135 (363)
T cd04955 67 LG------TIIYDILAILHALFVKRDIDHVHALGPAI-APFLPLLRLKG----KKVVVNMDGLEWKRAKWGRPAKRYLKF 135 (363)
T ss_pred hh------hhHHHHHHHHHHHhccCCeEEEEecCccH-HHHHHHHHhcC----CCEEEEccCcceeecccccchhHHHHH
Confidence 00 0000011111222 345667777666554 21222333333 67776666532110
Q ss_pred -cccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 288 -PTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 288 -~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
.++..+.+|.++++|+..++.+.+ ++.+. .+++|+++...+.+ +...++.++++++ +.++++|+....|+.
T Consensus 136 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~---~~i~ngv~~~~~~~---~~~~~~~~~~~~~-~~i~~~G~~~~~Kg~ 208 (363)
T cd04955 136 GEKLAVKFADRLIADSPGIKEYLKEKYGRDS---TYIPYGADHVVSSE---EDEILKKYGLEPG-RYYLLVGRIVPENNI 208 (363)
T ss_pred HHHHHHhhccEEEeCCHHHHHHHHHhcCCCC---eeeCCCcChhhcch---hhhhHHhcCCCCC-cEEEEEecccccCCH
Confidence 022456789999999999999854 45432 79999998765543 2334555666554 457788887777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHH-cCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----C
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLL-STDWKIPVQVKGFV--SKMEEAMGACDCIITKA----G 435 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~-~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G 435 (536)
..+++++.+.. .+.+++ ++|.++ ++.+.++ +.+..++|+++|++ +++.++|..||+++.|+ |
T Consensus 209 ~~li~a~~~l~-------~~~~l~-ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~ 280 (363)
T cd04955 209 DDLIEAFSKSN-------SGKKLV-IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGG 280 (363)
T ss_pred HHHHHHHHhhc-------cCceEE-EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCC
Confidence 87777775431 256654 456542 3445554 45667899999998 47889999999999987 3
Q ss_pred -hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHH
Q 036427 436 -PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVF 513 (536)
Q Consensus 436 -~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~ 513 (536)
|++++|||++|+|||+++.++..+ +++. .|.++...+.++++|..+++ +++.+.++++++++.+. .++++
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e------~~~~-~g~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNRE------VLGD-KAIYFKVGDDLASLLEELEA-DPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccce------eecC-CeeEecCchHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHH
Confidence 789999999999999999766544 3333 44555433349999999999 99999999999998875 48999
Q ss_pred HHHHHHHHHHh
Q 036427 514 RIVQDLHELVR 524 (536)
Q Consensus 514 ~i~~~i~~l~~ 524 (536)
.+++.+.++++
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999988763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-21 Score=200.20 Aligned_cols=344 Identities=11% Similarity=0.094 Sum_probs=210.7
Q ss_pred CCCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCc-eEEEEeecccccC----CCC----CCc--chhHHHHHHhh
Q 036427 142 DQPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNE-YQVFVTDLWSDHT----PWP----FNQ--LPRSYNFLVKH 206 (536)
Q Consensus 142 ~~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g-~eV~v~~~~~~~~----~~~----~~~--~~~~y~~~~~~ 206 (536)
.+.|||+|+|.. + +|.....+.++..|.++ | |+|+|+..+.... -++ |.. -+..|...+..
T Consensus 2 ~~~mrIaivTdt~lP~v-nGva~s~~~~a~~L~~~---G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~ 77 (462)
T PLN02846 2 QKKQHIAIFTTASLPWM-TGTAVNPLFRAAYLAKD---GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLE 77 (462)
T ss_pred CCCCEEEEEEcCCCCCC-CCeeccHHHHHHHHHhc---CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhcc
Confidence 356999999843 5 79988899999999999 7 6887764321100 011 000 01111100000
Q ss_pred c-----cccceeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEe
Q 036427 207 G-----PLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVI 280 (536)
Q Consensus 207 ~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~ 280 (536)
. +.+.+.+|.. +. .. .........++.+.|++++||+||++.|+..+. +..+++.+...++ ++ +++
T Consensus 78 ~~v~r~~s~~~p~yp~--r~-~~---~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~-~~~g~~~~~k~~~-vV~tyH 149 (462)
T PLN02846 78 ERISFLPKFSIKFYPG--KF-ST---DKRSILPVGDISETIPDEEADIAVLEEPEHLTW-YHHGKRWKTKFRL-VIGIVH 149 (462)
T ss_pred CeEEEecccccccCcc--cc-cc---cccccCChHHHHHHHHhcCCCEEEEcCchhhhh-HHHHHHHHhcCCc-EEEEEC
Confidence 0 1111111111 00 00 001111235788899999999999999886553 1111221111124 55 677
Q ss_pred cCCCCcc--------c--------cccc-ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH
Q 036427 281 TDLSTCH--------P--------TWFH-KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRE 343 (536)
Q Consensus 281 ~d~~~~~--------~--------~~~~-~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~ 343 (536)
+++..+. . .|+. ..+|.++++|....+ +.+. +....++++.+++.+.... .++.
T Consensus 150 T~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~------~i~~v~GVd~~~f~~~~~~--~~~~ 220 (462)
T PLN02846 150 TNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS------IICNVHGVNPKFLEIGKLK--LEQQ 220 (462)
T ss_pred CChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC------EEecCceechhhcCCCccc--Hhhh
Confidence 7763221 1 2222 237999999986655 4432 3334479998877654322 3333
Q ss_pred cCCCCC--CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh
Q 036427 344 LGMDED--LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS 418 (536)
Q Consensus 344 lgi~~~--~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~ 418 (536)
+. .++ .+.++++|+....|++..+++++.+... ..++++ ++++|+|+ ++++..+++++...+ |.|+.
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~----~~~~~~-l~ivGdGp~~~~L~~~a~~l~l~~~v-f~G~~- 292 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQK----ELSGLE-VDLYGSGEDSDEVKAAAEKLELDVRV-YPGRD- 292 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHh----hCCCeE-EEEECCCccHHHHHHHHHhcCCcEEE-ECCCC-
Confidence 32 333 3457889998888999888888765432 235665 56678887 345555555554333 77764
Q ss_pred hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHH
Q 036427 419 KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKID 494 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~ 494 (536)
+..++|+.+|++|.|| + |++++||||||+|||++++++. + .+.+.+.|..+.|++++++++..+++ ++.
T Consensus 293 ~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-~-----~v~~~~ng~~~~~~~~~a~ai~~~l~-~~~ 365 (462)
T PLN02846 293 HADPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-E-----FFKQFPNCRTYDDGKGFVRATLKALA-EEP 365 (462)
T ss_pred CHHHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCCc-c-----eeecCCceEecCCHHHHHHHHHHHHc-cCc
Confidence 5568999999999998 3 8999999999999999997652 3 25556667777899999999999998 432
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 495 ELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 495 ~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.++..++ ..++|+.+++.++++++-.
T Consensus 366 --~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 --APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred --hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 23333333 3889999999999988754
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-20 Score=190.43 Aligned_cols=311 Identities=14% Similarity=0.060 Sum_probs=204.3
Q ss_pred ceEEEEeCC-------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 145 KKVLILMSD-------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~~-------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|||++++.. ..||..+.+..|+++|.+. ||+|.+++............. ... ..+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~---g~~V~v~~~~~~~~~~~~~~~-------~~~-~~~~------ 63 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVAR---GHEVTLFASGDSKTAAPLVPV-------VPE-PLRL------ 63 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhc---CceEEEEecCCCCcccceeec-------cCC-Cccc------
Confidence 799998743 4589999999999999998 888887764332111000000 000 0000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc---cccccc
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP---TWFHKL 294 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~---~~~~~~ 294 (536)
...............+.+++++.+||+||++....... .++.. ++|+++..|+...... ......
T Consensus 64 -----~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~---~~~~~----~~~~v~~~h~~~~~~~~~~~~~~~~ 131 (335)
T cd03802 64 -----DAPGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP---FARPL----PVPVVTTLHGPPDPELLKLYYAARP 131 (335)
T ss_pred -----ccchhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh---hhccc----CCCEEEEecCCCCcccchHHHhhCc
Confidence 00001112233445677889999999999987654322 23322 3788766665432211 122355
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
.+.+++.|+...+.+... .++.+++|+++.+.+.+. +...+.++++|+....|+...+++++.
T Consensus 132 ~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~- 194 (335)
T cd03802 132 DVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFR------------GPKGDYLLFLGRISPEKGPHLAIRAAR- 194 (335)
T ss_pred CCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCC------------CCCCCEEEEEEeeccccCHHHHHHHHH-
Confidence 677889999888765432 678999999998766542 123457888888877777766665542
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCC-CCCCEEEecChh--hHHHHHhhcCeEEECC----C-hHHHHHHH
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTD-WKIPVQVKGFVS--KMEEAMGACDCIITKA----G-PGTIAEAM 443 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~-~~~~V~~~G~v~--~l~~ll~~aDv~V~~s----G-~~tllEAm 443 (536)
..++++ ++.|.+. ...+..++.. ..++|+|.|+++ ++.++|+.+|+++.|+ | |.+++|||
T Consensus 195 --------~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAm 265 (335)
T cd03802 195 --------RAGIPL-KLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAM 265 (335)
T ss_pred --------hcCCeE-EEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHH
Confidence 234555 4556653 2222233322 467899999984 6789999999999986 3 79999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCC-ceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHE 521 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~ 521 (536)
+||+|||+++.++..| +++++ .|.+++++++++++|..+++ .+. +++++. .+.++++++++.+.+
T Consensus 266 a~G~PvI~~~~~~~~e------~i~~~~~g~l~~~~~~l~~~l~~l~~-~~~------~~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 266 ACGTPVIAFRRGAVPE------VVEDGVTGFLVDSVEELAAAVARADR-LDR------AACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred hcCCCEEEeCCCCchh------heeCCCcEEEeCCHHHHHHHHHHHhc-cHH------HHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999765444 55555 67888889999999999876 432 233333 356899999999988
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
++
T Consensus 333 ~y 334 (335)
T cd03802 333 LY 334 (335)
T ss_pred Hh
Confidence 75
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-21 Score=203.49 Aligned_cols=334 Identities=13% Similarity=0.105 Sum_probs=198.7
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||||.+... -+||.++.++.|++.|.++ |++|.++-........ .. ....|....+..+.+... .+
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~---G~~~~i~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--------~~ 67 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ---GLASHFVYGYGKGGKE-SV-SHQNYPQVIKHTPRMTAM--------AN 67 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc---CCeEEEEEecCCCccc-cc-ccCCcceEEEecccHHHH--------HH
Confidence 799988643 2389999999999999998 7788666432221110 00 011110000111000000 00
Q ss_pred ch---hhhhhhHHHHHHHHHHH-HhhCCCEEEEcCcc--cchHHHHH--HH--HcCCCCCceEEEEecCCCCc-------
Q 036427 224 QS---NFAATSTFIAREVAKGL-MKYQPDIIISVHPL--MQHVPLRI--LR--AKGLLKKIVFTTVITDLSTC------- 286 (536)
Q Consensus 224 ~~---~~~~~~~~~~~~l~~~l-~~~kPDvVi~~~~~--~~~i~~~~--~~--~~g~~~~ip~v~~~~d~~~~------- 286 (536)
.. .+..........+.++| ++++|||||+|... +..+.... .+ +.. ..++|+++..||.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~-~~~~piV~TlHd~~~~tg~c~~~ 146 (405)
T PRK10125 68 IALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNH-KPDVTLVWTLHDHWSVTGRCAFT 146 (405)
T ss_pred HHHHHhcchhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcc-cCCCCEEEecccccccCCCcCCC
Confidence 00 00001112234555656 68999999998632 22222111 11 111 1248999888887631
Q ss_pred ------------------ccc---------c------c---cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCC
Q 036427 287 ------------------HPT---------W------F---HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSF 330 (536)
Q Consensus 287 ------------------~~~---------~------~---~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~ 330 (536)
++. | + .+.++.++++|+..++.+... ....++.+++|++|.+.
T Consensus 147 ~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~-~~~~~i~vI~NGid~~~ 225 (405)
T PRK10125 147 DGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL-YGPGRCRIINNGIDMAT 225 (405)
T ss_pred cccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH-cCCCCEEEeCCCcCccc
Confidence 110 0 1 123467899999999987653 34578999999999643
Q ss_pred CCCCCchHHHHHHcCCCCCCCEEEEecCCC--CCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCC
Q 036427 331 VKPVRPKVELRRELGMDEDLPAVLLMGGGE--GMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWK 408 (536)
Q Consensus 331 ~~~~~~~~~~r~~lgi~~~~~~il~~gg~~--g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~ 408 (536)
+....+....+ .++++++++++|+.. ..|+...+++++... .++++ +++.|.++.. ..
T Consensus 226 ~~~~~~~~~~~----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l-------~~~~~-L~ivG~g~~~--------~~ 285 (405)
T PRK10125 226 EAILAELPPVR----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL-------GDKIE-LHTFGKFSPF--------TA 285 (405)
T ss_pred ccccccccccc----cCCCCCEEEEEEeccccCCccHHHHHHHHHhC-------CCCeE-EEEEcCCCcc--------cc
Confidence 22111111111 134566777777732 335566666666532 23455 4566766421 12
Q ss_pred CCEEEecCh---hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHH
Q 036427 409 IPVQVKGFV---SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPK 479 (536)
Q Consensus 409 ~~V~~~G~v---~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~ 479 (536)
.++.+.|+. .++.++|+.||++|+|| | |++++||||||+|||+++.++.+| +++.+.|.+++ |++
T Consensus 286 ~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~E------iv~~~~G~lv~~~d~~ 359 (405)
T PRK10125 286 GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAARE------VLQKSGGKTVSEEEVL 359 (405)
T ss_pred cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHH------hEeCCcEEEECCCCHH
Confidence 368888876 47889999999999999 4 999999999999999999765443 66666788775 899
Q ss_pred HHHHHHHHHhCCCHHHHHH-H---HHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 480 EIANMVSQWFGPKIDELKA-M---SQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 480 ~La~~I~~ll~~d~~~~~~-m---~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
+|++.+ +++.+++ + .+++++.+ ..++++.+++++.+++++
T Consensus 360 ~La~~~------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 360 QLAQLS------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred HHHhcc------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 998753 4444443 2 24466554 569999999999988764
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-20 Score=201.44 Aligned_cols=277 Identities=19% Similarity=0.172 Sum_probs=188.8
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcC--CCCCceEEEEecCCCCcc--c-------------------
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKG--LLKKIVFTTVITDLSTCH--P------------------- 288 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g--~~~~ip~v~~~~d~~~~~--~------------------- 288 (536)
+.+...+++++ .+||+||++......++..+.+... ...++|++..+|++.... +
T Consensus 115 f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (476)
T cd03791 115 FSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDG 194 (476)
T ss_pred HHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcc
Confidence 34455566665 7999999987543333333333210 012488888877653100 0
Q ss_pred ----------ccccccCCEEEEcCHHHHHHHHHh----------CCCCCCEEEeCCCCCCCCCCCCCc------------
Q 036427 289 ----------TWFHKLVTRCYCPTADVAKRAMKA----------GLQASQIKVYGLPVRPSFVKPVRP------------ 336 (536)
Q Consensus 289 ----------~~~~~~~d~vi~~S~~~~~~l~~~----------g~~~~ki~vignpv~~~~~~~~~~------------ 336 (536)
+.....+|.++++|+..++.+... ..+..++.+++|+++.+.+.+..+
T Consensus 195 ~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~ 274 (476)
T cd03791 195 LEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDL 274 (476)
T ss_pred cccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcccc
Confidence 112457899999999998887531 123578999999999887765422
Q ss_pred ------hHHHHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--
Q 036427 337 ------KVELRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST-- 405 (536)
Q Consensus 337 ------~~~~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-- 405 (536)
+..++++++++ ++.++++++|+....|++..+++++.+... .++++ ++.|.++ .+.+.+++.
T Consensus 275 ~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-vi~G~g~~~~~~~~~~~~~ 347 (476)
T cd03791 275 EGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE------LGGQL-VILGSGDPEYEEALRELAA 347 (476)
T ss_pred ccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH------cCcEE-EEEecCCHHHHHHHHHHHH
Confidence 23567888884 778889999998878888777777765432 23555 4556654 333333322
Q ss_pred CCCCCEEE-ecChh-hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------Ccee
Q 036427 406 DWKIPVQV-KGFVS-KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGK 473 (536)
Q Consensus 406 ~~~~~V~~-~G~v~-~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~ 473 (536)
....++.+ .++.+ .+..+|+.||++++|| + |.+.+|||+||+|+|+++.++..+. +.+. +.|+
T Consensus 348 ~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~-----v~~~~~~~~~~~G~ 422 (476)
T cd03791 348 RYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADT-----VIDYNEDTGEGTGF 422 (476)
T ss_pred hCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccce-----EeCCcCCCCCCCeE
Confidence 12457765 45553 5578999999999998 3 7999999999999999997765552 3332 2677
Q ss_pred ecC--CHHHHHHHHHHHhC--CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 474 FSK--SPKEIANMVSQWFG--PKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 474 ~~~--d~~~La~~I~~ll~--~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+++ |+++++++|.++++ .+++.+.+|++++.+ ..++|+++++++.++++
T Consensus 423 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 423 VFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 774 89999999998774 167788888887765 46999999999998875
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-20 Score=192.37 Aligned_cols=261 Identities=18% Similarity=0.159 Sum_probs=186.8
Q ss_pred HHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--------------------------
Q 036427 236 REVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------------------- 287 (536)
Q Consensus 236 ~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------------------- 287 (536)
.+-.++++++ +||+|++.+.+. |+.+++..| +|++.+.+...+.+
T Consensus 81 ~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~----~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~ 153 (396)
T TIGR03492 81 LGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSG----KPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWER 153 (396)
T ss_pred HHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcC----CCceEEEeeccceeecCCCCCccchhhhccCCCccCHHHH
Confidence 4555678888 999999999886 677777776 78876333222122
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.++..+.++.+++..+...+.+.++|+ ++.++|||+.+...... +. +++++.+++++++|+.+.+....
T Consensus 154 n~l~~~~a~~v~~~~~~t~~~l~~~g~---k~~~vGnPv~d~l~~~~--~~------~l~~~~~~lllLpGSR~ae~~~~ 222 (396)
T TIGR03492 154 WLMRSRRCLAVFVRDRLTARDLRRQGV---RASYLGNPMMDGLEPPE--RK------PLLTGRFRIALLPGSRPPEAYRN 222 (396)
T ss_pred HHhhchhhCEEeCCCHHHHHHHHHCCC---eEEEeCcCHHhcCcccc--cc------ccCCCCCEEEEECCCCHHHHHcc
Confidence 344568999999999999999988876 59999999988765321 11 56667788999999886543322
Q ss_pred --HHHHHHHHhhhcccCCCCcEEEEEe-cCCH--HHHHHHHcCCCC--------------CCEEEecChhhHHHHHhhcC
Q 036427 368 --TARALGNALYDENLGEPIGQVLVIC-GRNK--KLANKLLSTDWK--------------IPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 368 --~l~al~~~l~~~~~~~~~~~~lvi~-G~~~--~l~~~l~~~~~~--------------~~V~~~G~v~~l~~ll~~aD 428 (536)
.+...++.+. .. +++.+++.+ |... .+.+.+++.++. .++.+..+.+++.++|+.||
T Consensus 223 lp~~l~al~~L~---~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~AD 298 (396)
T TIGR03492 223 LKLLLRALEALP---DS-QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWAD 298 (396)
T ss_pred HHHHHHHHHHHh---hC-CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCC
Confidence 2222223332 12 567777776 5442 344444443332 23677778889999999999
Q ss_pred eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC----Cceeec-C-CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN----GCGKFS-K-SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 429 v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~----g~g~~~-~-d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
++|+.||..| .|++++|+|+|+++..+. +. |+..+.+. |....+ + +++.+++.+..+++ |++.+++|.+.
T Consensus 299 lvI~rSGt~T-~E~a~lg~P~Ilip~~~~-q~-na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~-d~~~~~~~~~~ 374 (396)
T TIGR03492 299 LGIAMAGTAT-EQAVGLGKPVIQLPGKGP-QF-TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLA-DPELLERCRRN 374 (396)
T ss_pred EEEECcCHHH-HHHHHhCCCEEEEeCCCC-HH-HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence 9999999776 999999999999997544 44 67666653 444444 3 78999999999999 99999999854
Q ss_pred H-HHhcCCchHHHHHHHHHHH
Q 036427 503 A-LKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 503 a-~~~a~~~~~~~i~~~i~~l 522 (536)
+ .++...++.+++++.+.++
T Consensus 375 ~~~~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 375 GQERMGPPGASARIAESILKQ 395 (396)
T ss_pred HHHhcCCCCHHHHHHHHHHHh
Confidence 4 4566778999999988764
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-20 Score=205.24 Aligned_cols=276 Identities=16% Similarity=0.133 Sum_probs=185.8
Q ss_pred HHHHHHHHH-Hhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---------------c-c-------
Q 036427 234 IAREVAKGL-MKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---------------C-H------- 287 (536)
Q Consensus 234 ~~~~l~~~l-~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---------------~-~------- 287 (536)
+...+.+.+ ++. +||+||++......+...++++.| +|++.+.|.+.. . +
T Consensus 393 f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lg----VP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~a 468 (815)
T PLN00142 393 FAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLG----VTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTA 468 (815)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhC----CCEEEEcccchhhhccccCCcccccchhhhhhhchHH
Confidence 344444444 333 599999996544444555566666 999877663321 0 0
Q ss_pred cccccccCCEEEEcCHHHHHH-------HHH-------------hCCC--CCCEEEeCCCCCCCCCCCCCch-H------
Q 036427 288 PTWFHKLVTRCYCPTADVAKR-------AMK-------------AGLQ--ASQIKVYGLPVRPSFVKPVRPK-V------ 338 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~-------l~~-------------~g~~--~~ki~vignpv~~~~~~~~~~~-~------ 338 (536)
..+....+|.+++.+...... +.. .|++ ..++.++++++|...|.+.... .
T Consensus 469 E~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~ 548 (815)
T PLN00142 469 DLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLH 548 (815)
T ss_pred HHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhc
Confidence 122344677888777665531 111 1332 4588999999998866543211 1
Q ss_pred -----------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC-CH--------
Q 036427 339 -----------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR-NK-------- 396 (536)
Q Consensus 339 -----------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~-~~-------- 396 (536)
..++.+++ ++++++|+++|+....|++..+++++.+... ..+++++++++|. .+
T Consensus 549 n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~----l~~~~~LVIVGgg~d~~~s~d~ee 624 (815)
T PLN00142 549 PSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKR----LRELVNLVVVGGFIDPSKSKDREE 624 (815)
T ss_pred ccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHH----hCCCcEEEEEECCccccccccHHH
Confidence 12345665 5567789999998888998888888765322 1345676665543 10
Q ss_pred -----HHHHHHHcCCCCCCEEEecCh------hhHHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCcccc
Q 036427 397 -----KLANKLLSTDWKIPVQVKGFV------SKMEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 397 -----~l~~~l~~~~~~~~V~~~G~v------~~l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
++.+.++++++..+|.|+|.. +++..+++ .+|++|+|| | |++++|||+||+|||+++.++..+
T Consensus 625 ~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~E- 703 (815)
T PLN00142 625 IAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAE- 703 (815)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHH-
Confidence 123345566788899999864 24555555 479999998 3 899999999999999998654333
Q ss_pred CChhhHhhCC-ceeecC--CHHHHHHHHHHH----hCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHh
Q 036427 461 GNVPYVVENG-CGKFSK--SPKEIANMVSQW----FGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVR 524 (536)
Q Consensus 461 ~na~~lv~~g-~g~~~~--d~~~La~~I~~l----l~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~ 524 (536)
++.+| .|++++ |+++++++|.++ ++ |++.+++|+++|++.+ +.++|+++++.++++..
T Consensus 704 -----IV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~-Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~ 769 (815)
T PLN00142 704 -----IIVDGVSGFHIDPYHGDEAANKIADFFEKCKE-DPSYWNKISDAGLQRIYECYTWKIYAERLLTLGG 769 (815)
T ss_pred -----HhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 55555 576765 899999998754 47 9999999999999887 56899999999988764
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=203.43 Aligned_cols=255 Identities=18% Similarity=0.220 Sum_probs=189.6
Q ss_pred hCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCc---------------c-c----------ccccccCCE
Q 036427 245 YQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTC---------------H-P----------TWFHKLVTR 297 (536)
Q Consensus 245 ~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~---------------~-~----------~~~~~~~d~ 297 (536)
.++|+||++.....+++. .+.+..| +|++...|+.... . . +..++.+|.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~----~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ 247 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRG----TPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADR 247 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhC----CCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 478999998754433332 3334344 8888766653210 0 0 123468999
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++.|+..++.+.+.|.+++++.+++|+++.+.+.+.... ....+.++++++|+....|++..+++++.....
T Consensus 248 Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~ 320 (475)
T cd03813 248 ITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRA-------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRK 320 (475)
T ss_pred EEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCcccc-------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHH
Confidence 9999999999888889988999999999998766543211 123456788888888777888888777765433
Q ss_pred hcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 378 DENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
..++++++ ++|.++ ++.+.++++++.++|+|+| ..++.++|+.+|++|++| | |++++|||+||
T Consensus 321 ----~~p~~~l~-IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G 394 (475)
T cd03813 321 ----KIPDAEGW-VIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG 394 (475)
T ss_pred ----hCCCeEEE-EECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC
Confidence 24677754 456552 2344556677888999999 678999999999999998 4 89999999999
Q ss_pred CcEEEeccCCccccCChhhHhhC-------CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVEN-------GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRIV 516 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~-------g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i~ 516 (536)
+|||+++.++..+ +++. .+|.+++ |+++++++|.++++ |++.+++|++++++.+.+ +.+++++
T Consensus 395 ~PVVatd~g~~~e------lv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~~~~ 467 (475)
T cd03813 395 IPVVATDVGSCRE------LIEGADDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLERMI 467 (475)
T ss_pred CCEEECCCCChHH------HhcCCcccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999998654333 4544 2566654 89999999999999 999999999999998766 6889999
Q ss_pred HHHHHHH
Q 036427 517 QDLHELV 523 (536)
Q Consensus 517 ~~i~~l~ 523 (536)
+.+.++.
T Consensus 468 ~~y~~lY 474 (475)
T cd03813 468 DSYRRLY 474 (475)
T ss_pred HHHHHHh
Confidence 9988765
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=195.20 Aligned_cols=268 Identities=18% Similarity=0.156 Sum_probs=182.2
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--------CcccccccccCCEEEEc
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--------TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--------~~~~~~~~~~~d~vi~~ 301 (536)
......++.+.+++.+||+||+++.....++ ..+++..+ +|++.+.+... ...+.++.+.+|.++++
T Consensus 73 ~~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~----iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 73 TAGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLG----IPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcC----CCEEEEecccccCCCCCCchHHHHHHHHHhhhccCC
Confidence 3445567888899999999999976543332 33444444 89876654211 11223456788999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCC-CCC-CchHHHHHHcCCCCCCCEEEEecCCCCC----CcHHHHHHHHHHH
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFV-KPV-RPKVELRRELGMDEDLPAVLLMGGGEGM----GPIEATARALGNA 375 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~-~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~----k~~~~~l~al~~~ 375 (536)
++..++.+.+.|++++++.++|||+.+.+. ... ......++.+++++ .+++++++++... +.+..+++++.+.
T Consensus 149 s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~vlv~~~r~~~~~~~k~~~~l~~al~~l 227 (363)
T cd03786 149 TEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLP-KKYILVTLHRVENVDDGEQLEEILEALAEL 227 (363)
T ss_pred CHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCC-CCEEEEEeCCccccCChHHHHHHHHHHHHH
Confidence 999999999999999999999999744322 111 11122345677754 4556666665442 3444555555432
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcE
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPI 449 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPV 449 (536)
. ..++.+ ++.|.+. ++.+.++++.. .++|++.|.. +++..+|..||++|++|| +.+.|||++|+|+
T Consensus 228 -~-----~~~~~v-i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~Pv 299 (363)
T cd03786 228 -A-----EEDVPV-VFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPV 299 (363)
T ss_pred -H-----hcCCEE-EEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCE
Confidence 1 123443 3334332 44555555444 5689998764 689999999999999998 4578999999999
Q ss_pred EEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 450 ILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
|+++... ...++++.|.+..+. ++++++++|..+++ ++..+..|. ...+...+++++|++.|
T Consensus 300 I~~~~~~-----~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~-~~~~~~~~~--~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 300 LNLRDRT-----ERPETVESGTNVLVGTDPEAILAAIEKLLS-DEFAYSLMS--INPYGDGNASERIVEIL 362 (363)
T ss_pred EeeCCCC-----ccchhhheeeEEecCCCHHHHHHHHHHHhc-CchhhhcCC--CCCCCCCHHHHHHHHHh
Confidence 9987422 233577888887776 79999999999999 888888886 55667778888888765
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.7e-19 Score=187.46 Aligned_cols=263 Identities=14% Similarity=0.045 Sum_probs=181.7
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchH---HHHHHHHcCCCCCceEE-EEecCCCCccc----------------cc
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHV---PLRILRAKGLLKKIVFT-TVITDLSTCHP----------------TW 290 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i---~~~~~~~~g~~~~ip~v-~~~~d~~~~~~----------------~~ 290 (536)
++.-...+.+.|.+++|||||...|...+. ...++++.+ |++ .+++++..+.. .|
T Consensus 419 SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-----PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~ 493 (794)
T PLN02501 419 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-----HVVGVVHTNYLEYIKREKNGALQAFFVKHINNW 493 (794)
T ss_pred cccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-----CeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHH
Confidence 334456788889999999999998875432 234555543 555 67777643111 23
Q ss_pred cccc-CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 291 FHKL-VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 291 ~~~~-~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
+.+. +|.++++|..+.+ + +...+. ..++||.+++.+... ...++++++....+.++++|+....|++..++
T Consensus 494 v~r~hcD~VIaPS~atq~-L-----~~~vI~-nVnGVDte~F~P~~r-~~~~r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD-L-----PKSVIC-NVHGVNPKFLKIGEK-VAEERELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred HHHhhCCEEEcCCHHHHH-h-----ccccee-ecccccccccCCcch-hHHHHhcCCccccCceEEEEcccccCCHHHHH
Confidence 3322 7999999977663 3 222222 236999998876543 22335677765556678899988889998888
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEA 442 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEA 442 (536)
+++..... ..++++ ++++|+|+ ++.+.++++++ +|.|+|+.++..++|+.+|++|+|| | |++++||
T Consensus 566 eAla~L~~----~~pnvr-LvIVGDGP~reeLe~la~eLgL--~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEA 638 (794)
T PLN02501 566 DLLAKHKN----ELDGFN-LDVFGNGEDAHEVQRAAKRLDL--NLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEA 638 (794)
T ss_pred HHHHHHHh----hCCCeE-EEEEcCCccHHHHHHHHHHcCC--EEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHH
Confidence 88765432 235665 46668886 34444555444 5899999988889999999999998 4 9999999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
||||+|||++++++... +.+.+.+....|+++++++|.+++. ++..+..+.+ ....+|+.+++.+++.
T Consensus 639 MA~GlPVVATd~pG~e~------V~~g~nGll~~D~EafAeAI~~LLs-d~~~rl~~~a-----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 639 LAMGKFVVCADHPSNEF------FRSFPNCLTYKTSEDFVAKVKEALA-NEPQPLTPEQ-----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHcCCCEEEecCCCCce------EeecCCeEecCCHHHHHHHHHHHHh-CchhhhHHHH-----HhhCCHHHHHHHHHHh
Confidence 99999999999865321 3333444555799999999999999 7765544432 2378899999998876
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
-+-
T Consensus 707 ~~~ 709 (794)
T PLN02501 707 SDL 709 (794)
T ss_pred hcc
Confidence 543
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-19 Score=190.75 Aligned_cols=261 Identities=18% Similarity=0.168 Sum_probs=184.9
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CC-CCc----ccc-c---------ccccCCEEE
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DL-STC----HPT-W---------FHKLVTRCY 299 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~-~~~----~~~-~---------~~~~~d~vi 299 (536)
+.+.+.|...++|++|++.+.....+ +.+..+ +.|.+.+.| +. ... ... | ..+.+|.++
T Consensus 201 ~~f~~~L~~~~~di~i~dr~~~~~~~--~~~~~~---~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI 275 (500)
T TIGR02918 201 AYFLKQLNLTKKDIIILDRSTGIGQA--VLENKG---PAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFI 275 (500)
T ss_pred HHHHHHHhCCCCCEEEEcCCcccchH--HHhcCC---CceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEE
Confidence 34434445668999999987654432 223222 367765544 22 110 001 1 134579999
Q ss_pred EcCHHHHHHHHH----hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMK----AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~----~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
++|+..++.+.+ ++.+..++.++|+++++....+.. ......++++|+....|++..+++++...
T Consensus 276 ~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l 344 (500)
T TIGR02918 276 TATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-----------ERKPFSIITASRLAKEKHIDWLVKAVVKA 344 (500)
T ss_pred ECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-----------ccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence 999998887664 234467899999987654433211 12234677888887788888888888765
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP 448 (536)
.+ ..|++++ +++|.++ .+.+.+++.++.++|.+.|+. ++.++|+.||++|+|| | |++++|||+||+|
T Consensus 345 ~~----~~p~~~l-~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~P 418 (500)
T TIGR02918 345 KK----SVPELTF-DIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLG 418 (500)
T ss_pred Hh----hCCCeEE-EEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCC
Confidence 53 2567765 5557765 345556667778899999986 7899999999999998 4 8999999999999
Q ss_pred EEEeccCCccccCChhhHhhCC-ceeecC------C----HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 449 IILNDFIAGQEAGNVPYVVENG-CGKFSK------S----PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 449 VI~~~~~~~~e~~na~~lv~~g-~g~~~~------d----~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
||+++..++. ..++++| .|.+++ | +++|+++|..+++ ++ .+++|+++|++.++.++++++++
T Consensus 419 VI~~dv~~G~-----~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~-~~~~~~~~a~~~a~~fs~~~v~~ 491 (500)
T TIGR02918 419 MIGFDVNYGN-----PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SN-DIDAFHEYSYQIAEGFLTANIIE 491 (500)
T ss_pred EEEecCCCCC-----HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hH-HHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999975322 2255554 566664 1 7889999999996 44 68999999999999999999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.|.+++++
T Consensus 492 ~w~~ll~~ 499 (500)
T TIGR02918 492 KWKKLVRE 499 (500)
T ss_pred HHHHHHhh
Confidence 99998864
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-18 Score=181.93 Aligned_cols=252 Identities=15% Similarity=0.148 Sum_probs=179.5
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC--cc----------c--ccccccCCEEEEcCHHHHHH
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST--CH----------P--TWFHKLVTRCYCPTADVAKR 308 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~--~~----------~--~~~~~~~d~vi~~S~~~~~~ 308 (536)
..++|++|++.+.....++ ..... ..+.+.+.|+ ... .. . ......+|.+++.|+..++.
T Consensus 97 ~~~~diii~~~~~~~~~~~--~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 171 (372)
T cd04949 97 DTKPDVFILDRPTLDGQAL--LNMKK---AAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQD 171 (372)
T ss_pred CCCCCEEEECCccccchhH--HhccC---CceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHH
Confidence 4789999998876543212 22111 2344433332 110 00 0 01235788999999999998
Q ss_pred HHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEE
Q 036427 309 AMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQV 388 (536)
Q Consensus 309 l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~ 388 (536)
+.+..-...++.+++++++.....+... .......++++|+....|++..+++++.+... ..+++++
T Consensus 172 l~~~~~~~~~v~~ip~g~~~~~~~~~~~---------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~----~~~~~~l 238 (372)
T cd04949 172 LQKQFGNYNPIYTIPVGSIDPLKLPAQF---------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVK----QVPDATL 238 (372)
T ss_pred HHHHhCCCCceEEEcccccChhhcccch---------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHH----hCCCcEE
Confidence 8775433445889999998765543210 11344578888888777888888887776543 3577775
Q ss_pred EEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccC
Q 036427 389 LVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAG 461 (536)
Q Consensus 389 lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~ 461 (536)
. ++|.++ .+.+..++.++..+|.+.|+.+++.++|+.||++|.+| | |++++|||++|+|||+++...+..
T Consensus 239 ~-i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~-- 315 (372)
T cd04949 239 D-IYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPS-- 315 (372)
T ss_pred E-EEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcH--
Confidence 4 456554 34455566677889999999899999999999999998 4 899999999999999998653222
Q ss_pred ChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 462 NVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 462 na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
..+.+...|.+++ |+++++++|..+++ +++.+++|++++++.+.+++++++++.|
T Consensus 316 --~~v~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 316 --EIIEDGENGYLVPKGDIEALAEAIIELLN-DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred --HHcccCCCceEeCCCcHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 2244445677776 89999999999999 9999999999999998889999988754
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-18 Score=177.80 Aligned_cols=210 Identities=18% Similarity=0.200 Sum_probs=157.4
Q ss_pred cccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
++.+.+|.++++|+..++.+.+ ++...+++.+++++++...+.... ..++.+.++++|+....|++..+
T Consensus 179 ~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~----------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 179 YLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP----------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred HHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC----------CCCCCEEEEEeeccccccCHHHH
Confidence 3457899999999999999876 466678899999999876443221 12345677788888778888888
Q ss_pred HHHHHHHhhhcccCCCCcEE-EEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhh--cCeEEECC---C-h
Q 036427 369 ARALGNALYDENLGEPIGQV-LVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGA--CDCIITKA---G-P 436 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~-lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~--aDv~V~~s---G-~ 436 (536)
++++.+... ..++..+ +++.|.++ .+++.+++.....+|+|+|+++ ++.++|+. +|++|.+| | |
T Consensus 249 i~a~~~l~~----~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p 324 (407)
T cd04946 249 IKALAALAK----ARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLP 324 (407)
T ss_pred HHHHHHHHH----hCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCcccccc
Confidence 887766543 2343333 34556665 3444454555677899999995 78899975 67899888 5 8
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-ceeecC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-Cch
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK---SPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDA 511 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~ 511 (536)
++++|||++|+|||+++.++..| +++++ .|.++. |+++++++|.++++ |++.+++|+++|++... .+.
T Consensus 325 ~~llEAma~G~PVIas~vgg~~e------~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 325 VSIMEAMSFGIPVIATNVGGTPE------IVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred HHHHHHHHcCCCEEeCCCCCcHH------HhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999655443 55565 677664 68999999999999 99999999999999874 577
Q ss_pred HHHHHHHHH
Q 036427 512 VFRIVQDLH 520 (536)
Q Consensus 512 ~~~i~~~i~ 520 (536)
++.+.+.+.
T Consensus 398 ~~~~~~~~~ 406 (407)
T cd04946 398 ASKNYREFA 406 (407)
T ss_pred HHHhHHHhc
Confidence 777776653
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-18 Score=175.15 Aligned_cols=184 Identities=20% Similarity=0.175 Sum_probs=135.7
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
.+.+|.+++.|+.+++.+.+..- .+..+++||++.+.+.+.. ...+.++++|+....|+...++++
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~~------------~~~~~il~~G~~~~~K~~~~li~a 216 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPAE------------EKEDYYLSVGRLVPYKRIDLAIEA 216 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcCC------------CCCCEEEEEEcCccccChHHHHHH
Confidence 37899999999999999876532 3467899998876654321 124567888887777887777776
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC--C-hHHHHHHHHhC
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA--G-PGTIAEAMIRG 446 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s--G-~~tllEAma~G 446 (536)
+.+. + .+ ++++|.+++. +.+++ ...++|+|.|+++ ++.++|+.||++++|+ | |.+++|||+||
T Consensus 217 ~~~~--------~-~~-l~ivG~g~~~-~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G 284 (351)
T cd03804 217 FNKL--------G-KR-LVVIGDGPEL-DRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASG 284 (351)
T ss_pred HHHC--------C-Cc-EEEEECChhH-HHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcC
Confidence 6531 2 45 4566777632 33333 4567999999995 5999999999999997 3 88999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH-HHHHHHHHHHHHhc
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI-DELKAMSQNALKLA 507 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~-~~~~~m~~~a~~~a 507 (536)
+|||+++.++..+. +.+...|.+++ |+++++++|..+++ ++ ..+++++++++++.
T Consensus 285 ~Pvi~~~~~~~~e~-----i~~~~~G~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~ 342 (351)
T cd03804 285 TPVIAYGKGGALET-----VIDGVTGILFEEQTVESLAAAVERFEK-NEDFDPQAIRAHAERFS 342 (351)
T ss_pred CCEEEeCCCCCcce-----eeCCCCEEEeCCCCHHHHHHHHHHHHh-CcccCHHHHHHHHHhcC
Confidence 99999987654442 44556777774 89999999999999 77 55666666665543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-17 Score=175.64 Aligned_cols=161 Identities=20% Similarity=0.202 Sum_probs=125.7
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhh
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGA 426 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~ 426 (536)
++++++|+++.|+.+..........+.+++.. .+.++++.+|...... ....++|.+.+|++ ..++|..
T Consensus 236 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~-----~~~~~i~~~g~~~~~~-----~~~~~~v~~~~~~p-~~~ll~~ 304 (401)
T cd03784 236 AAGRPPVYVGFGSMVVRDPEALARLDVEAVAT-----LGQRAILSLGWGGLGA-----EDLPDNVRVVDFVP-HDWLLPR 304 (401)
T ss_pred hCCCCcEEEeCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEccCccccc-----cCCCCceEEeCCCC-HHHHhhh
Confidence 34567888888887655555666666666642 3467777777654211 23457899999985 6889999
Q ss_pred cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 427 CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 427 aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
||++|+++|.+|+.||+++|+|+|++|...+|. .|++.+.+.|+|..+. +++++.++++++++ ++ .++++.+.
T Consensus 305 ~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~-~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~-~~-~~~~~~~~ 381 (401)
T cd03784 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQP-FWAARVAELGAGPALDPRELTAERLAAALRRLLD-PP-SRRRAAAL 381 (401)
T ss_pred hheeeecCCchhHHHHHHcCCCEEeeCCCCCcH-HHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhC-HH-HHHHHHHH
Confidence 999999999999999999999999999987754 5999999999998774 68999999999998 54 56667777
Q ss_pred HHHhcCCchHHHHHHHHHH
Q 036427 503 ALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 503 a~~~a~~~~~~~i~~~i~~ 521 (536)
+.++....+.+++++.|++
T Consensus 382 ~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 382 LRRIREEDGVPSAADVIER 400 (401)
T ss_pred HHHHHhccCHHHHHHHHhh
Confidence 7777677888888887764
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-17 Score=172.61 Aligned_cols=226 Identities=13% Similarity=0.153 Sum_probs=145.8
Q ss_pred HHhhCCCEEEEcCcccc--hHHH-HHHHHcCCCCCceEEEEecCCCCc------------------ccccccccCCEEEE
Q 036427 242 LMKYQPDIIISVHPLMQ--HVPL-RILRAKGLLKKIVFTTVITDLSTC------------------HPTWFHKLVTRCYC 300 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~--~i~~-~~~~~~g~~~~ip~v~~~~d~~~~------------------~~~~~~~~~d~vi~ 300 (536)
+++.+||+||++.+... .+.. .+++.. +.|+++..||+... ..+++++.+|.+++
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~----~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~ 171 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLR----RAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLC 171 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHh----CCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEE
Confidence 35689999999764432 1122 223333 37887666664210 11355788999999
Q ss_pred cCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCC-CEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 301 PTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDL-PAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 301 ~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~-~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+|+.+.+.+.+. +++ +.+++|+.. +.+.+..... .+..+. .+++++|+....|+...+++++......
T Consensus 172 ~S~~~~~~l~~~~g~~---i~vi~n~~~-~~f~~~~~~~------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~ 241 (371)
T PLN02275 172 VTKAMQHELDQNWGIR---ATVLYDQPP-EFFRPASLEI------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRR 241 (371)
T ss_pred CCHHHHHHHHHhcCCC---eEEECCCCH-HHcCcCCchh------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhh
Confidence 999999998774 664 788999853 3333321111 111223 3445556656667777666665432110
Q ss_pred ---c-c---------cCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEec-Ch--hhHHHHHhhcCeEEEC--C---
Q 036427 379 ---E-N---------LGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKG-FV--SKMEEAMGACDCIITK--A--- 434 (536)
Q Consensus 379 ---~-~---------~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G-~v--~~l~~ll~~aDv~V~~--s--- 434 (536)
+ . ...+++++ +++|+|+ ++++.+++.++.+ +.+.+ ++ +++.++|+.||++|++ +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~l-~ivG~G~~~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~ 319 (371)
T PLN02275 242 VAARLNESDSASGKQSLYPRLLF-IITGKGPQKAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSG 319 (371)
T ss_pred hhhccccccccccccccCCCeEE-EEEeCCCCHHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhCCEEEEecccccc
Confidence 0 0 12356665 5567775 4566677777764 88765 55 6999999999999864 2
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHh-hCCceeecCCHHHHHHHHHHHh
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV-ENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv-~~g~g~~~~d~~~La~~I~~ll 489 (536)
| |++++||||||+|||+++.++.. +++ +.++|.+++++++|+++|.+++
T Consensus 320 e~~p~~llEAmA~G~PVVa~~~gg~~------eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 320 LDLPMKVVDMFGCGLPVCAVSYSCIG------ELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred ccccHHHHHHHHCCCCEEEecCCChH------HHccCCCCeEEECCHHHHHHHHHHhC
Confidence 3 88999999999999999854433 355 4557888889999999998875
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-16 Score=162.81 Aligned_cols=233 Identities=15% Similarity=0.106 Sum_probs=163.6
Q ss_pred ceEEEEecCCC--CcccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCC-CC
Q 036427 274 IVFTTVITDLS--TCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMD-ED 349 (536)
Q Consensus 274 ip~v~~~~d~~--~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~-~~ 349 (536)
.|+++..+... ..+.+|+.+ -+.++++|+.+++.+++.|++.. + ++++++|.+.+.+.. ...+++++++.. ++
T Consensus 71 ~~~~tt~~g~~~~~~y~~~m~~-~~~vIavS~~t~~~L~~~G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~ 147 (335)
T PHA01633 71 KYFYTTCDGIPNIEIVNKYLLQ-DVKFIPNSKFSAENLQEVGLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPD 147 (335)
T ss_pred CceEEeeCCcCchHHHHHHHhc-CCEEEeCCHHHHHHHHHhCCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCC
Confidence 56665555433 233455555 45889999999999999888754 4 466899987766543 234667777653 45
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCCHHHHHHHHcCCCCCCEEEec---Ch--hhH
Q 036427 350 LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRNKKLANKLLSTDWKIPVQVKG---FV--SKM 420 (536)
Q Consensus 350 ~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G---~v--~~l 420 (536)
.++++++|+....|+...+++++..... ..++ +++ ++.|.. .+++++...+|+|+| ++ +++
T Consensus 148 ~~~i~~vGRl~~~KG~~~LI~A~~~L~~----~~p~~~~~i~l-~ivG~~-----~~~~l~l~~~V~f~g~~G~~~~~dl 217 (335)
T PHA01633 148 TIKFGIVSGLTKRKNMDLMLQVFNELNT----KYPDIAKKIHF-FVISHK-----QFTQLEVPANVHFVAEFGHNSREYI 217 (335)
T ss_pred CeEEEEEeCCccccCHHHHHHHHHHHHH----hCCCccccEEE-EEEcHH-----HHHHcCCCCcEEEEecCCCCCHHHH
Confidence 5678888888888888888887765433 1233 344 444532 234456677899985 33 589
Q ss_pred HHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCcccc-C----------ChhhHh--hCCceeecC--CHHHH
Q 036427 421 EEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEA-G----------NVPYVV--ENGCGKFSK--SPKEI 481 (536)
Q Consensus 421 ~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~-~----------na~~lv--~~g~g~~~~--d~~~L 481 (536)
.++|+.||++|+|| | |++++|||+||+|||+++.++..|. + ++.... +.|.|+.+. |++++
T Consensus 218 ~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~l 297 (335)
T PHA01633 218 FAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDM 297 (335)
T ss_pred HHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHH
Confidence 99999999999998 4 8999999999999999998766552 1 122222 245666664 99999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 482 a~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+++|..++. .. .++.+++++++.++.+.++++++.+++
T Consensus 298 a~ai~~~~~-~~-~~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 298 ANAIILAFE-LQ-DREERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred HHHHHHHHh-cc-ChhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 999999966 22 233447788889999999999988763
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-18 Score=174.64 Aligned_cols=300 Identities=21% Similarity=0.210 Sum_probs=162.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+|.+.+.|.||..++++|+++| + |++|.+....... .+....+. + ... +-+.......... ...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--r---g~~v~~~~~~~~~-~~~~~~~~--~---~~~-~~~~~~~~~~~~~-~~~ 67 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--R---GHEVTFITSGPAP-EFLKPRFP--V---REI-PGLGPIQENGRLD-RWK 67 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--c---cCceEEEEcCCcH-HHhccccC--E---EEc-cCceEeccCCccc-hHH
Confidence 8999999999999999999999999 4 4666555332210 00000000 0 000 0011111000000 000
Q ss_pred hhhh-----hhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-cccccccCCEE
Q 036427 225 SNFA-----ATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-PTWFHKLVTRC 298 (536)
Q Consensus 225 ~~~~-----~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-~~~~~~~~d~v 298 (536)
.... .......+++.+++++++||+||++.... ...+++..| +|++.+.+.....+ ..++... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~---~~~aa~~~g----iP~i~i~~~~~~~~~~~~~~~~-~-- 137 (318)
T PF13528_consen 68 TVRNNIRWLARLARRIRREIRWLREFRPDLVISDFYPL---AALAARRAG----IPVIVISNQYWFLHPNFWLPWD-Q-- 137 (318)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHH---HHHHHHhcC----CCEEEEEehHHcccccCCcchh-h--
Confidence 0010 11233445677889999999999997654 234556665 89887766543221 1111100 0
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCC---CCCCCCCCCCchHHHHH-HcCC-CCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLP---VRPSFVKPVRPKVELRR-ELGM-DEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignp---v~~~~~~~~~~~~~~r~-~lgi-~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.......+...+.-.++....+.... ......... ...-+++ .+.. +.+.+.|+++.|+.+.. +++..+.
T Consensus 138 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~iLv~~gg~~~~---~~~~~l~ 212 (318)
T PF13528_consen 138 -DFGRLIERYIDRYHFPPADRRLALSFYPPLPPFFRVPF-VGPIIRPEIRELPPEDEPKILVYFGGGGPG---DLIEALK 212 (318)
T ss_pred -hHHHHHHHhhhhccCCcccceecCCccccccccccccc-cCchhcccccccCCCCCCEEEEEeCCCcHH---HHHHHHH
Confidence 00000111111111122222211111 111000000 0000110 1111 12345566555544433 3333332
Q ss_pred HHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh-hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 374 NALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV-SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v-~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
+ .++..++++ |..... ....+|++.++. +++.++|..||++|+.+|.+|+.|++++|+|+|++
T Consensus 213 ~--------~~~~~~~v~-g~~~~~-------~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~i 276 (318)
T PF13528_consen 213 A--------LPDYQFIVF-GPNAAD-------PRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVI 276 (318)
T ss_pred h--------CCCCeEEEE-cCCccc-------ccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEE
Confidence 2 245566555 766310 115689999988 89999999999999999999999999999999999
Q ss_pred ccCC-ccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 453 DFIA-GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 453 ~~~~-~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
|..+ ..|..|+..+.+.|.|..++ +++.|.++|+++
T Consensus 277 p~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 277 PRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred eCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 9864 45566999999999999875 688888887654
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-17 Score=162.92 Aligned_cols=263 Identities=21% Similarity=0.172 Sum_probs=157.5
Q ss_pred eEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccc
Q 036427 146 KVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~ 221 (536)
||+|.+. .+|.||.+||++||++|++. |++|..+...... .+ ...+.+.+ +... .... .
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~---g~~v~f~~~~~~~------~~---~~~i~~~g~~v~~--~~~~--~- 63 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQ---GAEVAFACKPLPG------DL---IDLLLSAGFPVYE--LPDE--S- 63 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHC---CCEEEEEeCCCCH------HH---HHHHHHcCCeEEE--ecCC--C-
Confidence 6888873 48899999999999999888 7787554321110 00 01111111 1111 0000 0
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~ 301 (536)
....-..++.+++++.+||+||++++.....-....+.. .+.+.++.|+.. ++ ..+|.++..
T Consensus 64 --------~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~-----~~~l~~iDD~~~-~~----~~~D~vin~ 125 (279)
T TIGR03590 64 --------SRYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEF-----GRKILVIDDLAD-RP----HDCDLLLDQ 125 (279)
T ss_pred --------chhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHh-----CCeEEEEecCCC-CC----cCCCEEEeC
Confidence 001123467888999999999999975443212223322 345567777642 22 268999887
Q ss_pred CHHHHHHHHHhC-CCCCCEEEeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEE-ecCCCCCCcHHHHHHHHHHHh
Q 036427 302 TADVAKRAMKAG-LQASQIKVYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLL-MGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 302 S~~~~~~l~~~g-~~~~ki~vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~-~gg~~g~k~~~~~l~al~~~l 376 (536)
+.. .+...-.+ +++....+.|. +++++|..... +. ..+ ++.+.|++ +||+.+..-..++++++.+.
T Consensus 126 ~~~-~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~-~~-~~~-----~~~~~iLi~~GG~d~~~~~~~~l~~l~~~- 196 (279)
T TIGR03590 126 NLG-ADASDYQGLVPANCRLLLGPSYALLREEFYQLAT-AN-KRR-----KPLRRVLVSFGGADPDNLTLKLLSALAES- 196 (279)
T ss_pred CCC-cCHhHhcccCcCCCeEEecchHHhhhHHHHHhhH-hh-hcc-----cccCeEEEEeCCcCCcCHHHHHHHHHhcc-
Confidence 765 33322223 55566778887 78777654321 11 110 12244444 55544433234455555432
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
..+.++.+++|.+....+.+++. ....++++.+++++|.++|+.||++|+++| .|+.|++++|+|+|+++..
T Consensus 197 ------~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 197 ------QINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA 269 (279)
T ss_pred ------ccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec
Confidence 24566777888764222222221 123489999999999999999999999777 8999999999999999987
Q ss_pred Cccc
Q 036427 456 AGQE 459 (536)
Q Consensus 456 ~~~e 459 (536)
.+|+
T Consensus 270 ~nQ~ 273 (279)
T TIGR03590 270 ENQQ 273 (279)
T ss_pred ccHH
Confidence 6655
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.9e-17 Score=164.62 Aligned_cols=214 Identities=14% Similarity=0.123 Sum_probs=147.1
Q ss_pred cc-cccCCEEEEcCHHHHHHHHHhCCC-CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC-CCCcHH
Q 036427 290 WF-HKLVTRCYCPTADVAKRAMKAGLQ-ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE-GMGPIE 366 (536)
Q Consensus 290 ~~-~~~~d~vi~~S~~~~~~l~~~g~~-~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~ 366 (536)
++ .+.+|.++++|+.+++.+.+.+++ ++++.+++|++|.+.+.+.... .+.+.+++++|.. ..|+..
T Consensus 89 ~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~----------~~~~~vl~~~g~~~~~Kg~d 158 (331)
T PHA01630 89 FFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE----------KPHPCVLAILPHSWDRKGGD 158 (331)
T ss_pred HHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc----------cCCCEEEEEeccccccCCHH
Confidence 44 577999999999999999888775 5789999999998766543211 1234555566554 567777
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
.+++++..... ..+++.++ +.|.+... ..+. ++. . +.+.+ +++.++|+.||++|+|| | |++++
T Consensus 159 ~Li~A~~~l~~----~~~~~~ll-ivG~~~~~-~~l~--~~~-~--~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~l 227 (331)
T PHA01630 159 IVVKIFHELQN----EGYDFYFL-IKSSNMLD-PRLF--GLN-G--VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVI 227 (331)
T ss_pred HHHHHHHHHHh----hCCCEEEE-EEeCcccc-hhhc--ccc-c--eeccCCHHHHHHHHHhCCEEEECCccccCChHHH
Confidence 77777755432 23566654 45654311 1111 111 1 22223 69999999999999998 3 89999
Q ss_pred HHHHhCCcEEEeccCCcccc---CChhhHhh------------CCceeecC-CHHHHHHHHHHHhCCC---HHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEA---GNVPYVVE------------NGCGKFSK-SPKEIANMVSQWFGPK---IDELKAMSQ 501 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~---~na~~lv~------------~g~g~~~~-d~~~La~~I~~ll~~d---~~~~~~m~~ 501 (536)
||||||+|||+++.++..|. +....+++ .++|.+++ |.+++++++.+++. + ++.++.++.
T Consensus 228 EAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~-~~~~~~~~~~~~~ 306 (331)
T PHA01630 228 EALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALA-NWTPEKKKENLEG 306 (331)
T ss_pred HHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHh-CCCHHHHHHHHHH
Confidence 99999999999997654442 00111111 12355554 78888888888888 6 456667777
Q ss_pred HHHHhcCCchHHHHHHHHHHHHhh
Q 036427 502 NALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 502 ~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++..++.++++++++++++++++
T Consensus 307 ~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 307 RAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhc
Confidence 777788899999999999998864
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-14 Score=147.26 Aligned_cols=329 Identities=19% Similarity=0.198 Sum_probs=212.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
.=|+|.+.+. |....+.+|.++|++++| +..+++++.... +.....+.-+-.....|.+
T Consensus 50 p~vWiHaaSV--GEv~a~~pLv~~l~~~~P-~~~ilvTt~T~T-----------g~e~a~~~~~~~v~h~YlP------- 108 (419)
T COG1519 50 PLVWIHAASV--GEVLAALPLVRALRERFP-DLRILVTTMTPT-----------GAERAAALFGDSVIHQYLP------- 108 (419)
T ss_pred CeEEEEecch--hHHHHHHHHHHHHHHhCC-CCCEEEEecCcc-----------HHHHHHHHcCCCeEEEecC-------
Confidence 4599999998 999999999999999988 567777654321 1110111111001111111
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecCCCC-ccc---------ccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHP---------TWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~---------~~~~~ 293 (536)
.. ....+.++++..+||++|... ..+... +..++++| +|.+.+-.-++. .+. +.+.+
T Consensus 109 -----~D--~~~~v~rFl~~~~P~l~Ii~EtElWPnl-i~e~~~~~----~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~ 176 (419)
T COG1519 109 -----LD--LPIAVRRFLRKWRPKLLIIMETELWPNL-INELKRRG----IPLVLVNARLSDRSFARYAKLKFLARLLFK 176 (419)
T ss_pred -----cC--chHHHHHHHHhcCCCEEEEEeccccHHH-HHHHHHcC----CCEEEEeeeechhhhHHHHHHHHHHHHHHH
Confidence 01 112566789999999888754 333221 23344555 888765443322 111 22356
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
..|.+++.|+..++++...|.++ +.++||--.+..-.+. ...+.+|..++.+ ++++++.+. ..+-++++..
T Consensus 177 ~i~li~aQse~D~~Rf~~LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r~v~iaaST---H~GEeei~l~ 249 (419)
T COG1519 177 NIDLILAQSEEDAQRFRSLGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--RPVWVAAST---HEGEEEIILD 249 (419)
T ss_pred hcceeeecCHHHHHHHHhcCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--CceEEEecC---CCchHHHHHH
Confidence 78899999999999999999876 8899985322211111 1123456666543 555544433 2233444444
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCC-------------CCCCEEEecChhhHHHHHhhcCeEEECC
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTD-------------WKIPVQVKGFVSKMEEAMGACDCIITKA 434 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~-------------~~~~V~~~G~v~~l~~ll~~aDv~V~~s 434 (536)
+.+.+++ ..++.. ++++-.++ ...+.+++.+ ...+|.+.+...+|..+|..+|+.++.+
T Consensus 250 ~~~~l~~---~~~~~l-lIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 250 AHQALKK---QFPNLL-LILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGG 325 (419)
T ss_pred HHHHHHh---hCCCce-EEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECC
Confidence 4444442 345654 45556655 2334444432 2347888888899999999999977754
Q ss_pred -----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 435 -----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 435 -----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
||..++|++++|+|||.-++..+..+ .++.+.+.|.+..++|.+.+++++..++. |++.+++|++++..+..+
T Consensus 326 Slv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e-i~~~l~~~ga~~~v~~~~~l~~~v~~l~~-~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 326 SLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD-IAERLLQAGAGLQVEDADLLAKAVELLLA-DEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred cccCCCCCChhhHHHcCCCEEeCCccccHHH-HHHHHHhcCCeEEECCHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
Confidence 78999999999999999998765443 56778889999999999999999999999 899999999999987654
Q ss_pred c--hHHHHHHHH
Q 036427 510 D--AVFRIVQDL 519 (536)
Q Consensus 510 ~--~~~~i~~~i 519 (536)
+ +.++..+.|
T Consensus 404 ~~gal~r~l~~l 415 (419)
T COG1519 404 NRGALARTLEAL 415 (419)
T ss_pred hhHHHHHHHHHh
Confidence 3 444444444
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-17 Score=150.87 Aligned_cols=169 Identities=34% Similarity=0.616 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHHHH
Q 036427 158 HRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIARE 237 (536)
Q Consensus 158 h~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (536)
|...|.+|+++|++++|++++|.++|......++........|....+..++|...|+.+..................++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~D~~~~~~p~~~~~~~~~Y~~~~~~~~ly~~~y~~~~~~~~~~~~~~~~~~~~~~~ 80 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVVDFLEEASPWLRRLIRKAYLFMVRHAPLYGWLYRWTDKRRPRSKFLSALSRLFARR 80 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEehHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHH
Confidence 67889999999999767789999999887766665666778898888877888888887654333333334456667789
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhCCCCC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQAS 317 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ 317 (536)
+.++|++++||+|+|++|+...+++..++..+..+++|++++++|+...|+.|+.+.+|.++++++++++.+.+.|++++
T Consensus 81 l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~~W~~~~~D~y~Vase~~~~~l~~~Gi~~~ 160 (169)
T PF06925_consen 81 LIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHPFWIHPGVDRYFVASEEVKEELIERGIPPE 160 (169)
T ss_pred HHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCcCeecCCCCEEEECCHHHHHHHHHcCCChh
Confidence 99999999999999999998776566566666554599999999997579999999999999999999999999999999
Q ss_pred CEEEeCCCC
Q 036427 318 QIKVYGLPV 326 (536)
Q Consensus 318 ki~vignpv 326 (536)
+|+++|.|+
T Consensus 161 ~I~vtGiPV 169 (169)
T PF06925_consen 161 RIHVTGIPV 169 (169)
T ss_pred HEEEeCccC
Confidence 999999885
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-14 Score=153.08 Aligned_cols=165 Identities=18% Similarity=0.211 Sum_probs=128.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.++++|++..|+...... ..++.+.+++. ..+.++++..|.+.+. +.+++ ...++.+.+|++. .++|..|
T Consensus 223 ~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~-----~~~~~~i~~~g~~~~~-~~~~~--~~~~v~~~~~~p~-~~ll~~~ 292 (392)
T TIGR01426 223 DGRPVVLISLGTVFNNQP-SFYRTCVEAFR-----DLDWHVVLSVGRGVDP-ADLGE--LPPNVEVRQWVPQ-LEILKKA 292 (392)
T ss_pred CCCCEEEEecCccCCCCH-HHHHHHHHHHh-----cCCCeEEEEECCCCCh-hHhcc--CCCCeEEeCCCCH-HHHHhhC
Confidence 456778777776433332 36666666664 2445677777765422 22222 4568999999975 5899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|+++...+++. |+..+.+.|.|..+. +++++.++|+++++ +++.++++.+.+
T Consensus 293 ~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~-~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~-~~~~~~~~~~l~ 370 (392)
T TIGR01426 293 DAFITHGGMNSTMEALFNGVPMVAVPQGADQPM-TARRIAELGLGRHLPPEEVTAEKLREAVLAVLS-DPRYAERLRKMR 370 (392)
T ss_pred CEEEECCCchHHHHHHHhCCCEEecCCcccHHH-HHHHHHHCCCEEEeccccCCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 999999999999999999999999998877664 899999999998774 68999999999999 999888888888
Q ss_pred HHhcCCchHHHHHHHHHHHHh
Q 036427 504 LKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~ 524 (536)
..+....+.+++++.|++++.
T Consensus 371 ~~~~~~~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 371 AEIREAGGARRAADEIEGFLA 391 (392)
T ss_pred HHHHHcCCHHHHHHHHHHhhc
Confidence 877778888999998888764
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-14 Score=145.21 Aligned_cols=355 Identities=16% Similarity=0.127 Sum_probs=229.4
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAP 219 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~ 219 (536)
|.+|||+++.+.. -..--...|..++.+. + +.+..|+ +.--.+ ......|....+.. |-+..-......
T Consensus 1 m~~~Kv~~I~GTR--PE~iKmapli~~~~~~-~-~~~~~vi~TGQH~d-----~em~~~~le~~~i~~pdy~L~i~~~~~ 71 (383)
T COG0381 1 MKMLKVLTIFGTR--PEAIKMAPLVKALEKD-P-DFELIVIHTGQHRD-----YEMLDQVLELFGIRKPDYDLNIMKPGQ 71 (383)
T ss_pred CCceEEEEEEecC--HHHHHHhHHHHHHHhC-C-CCceEEEEeccccc-----HHHHHHHHHHhCCCCCCcchhccccCC
Confidence 4578999887664 5566777888999987 2 3555444 221110 01111222122222 211111110011
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC---c-----cccc
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST---C-----HPTW 290 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~---~-----~~~~ 290 (536)
. ...........+.+++.+.+||+|++++.....++ ..++... +||+..+.....+ . .++.
T Consensus 72 t------l~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~----~IpV~HvEAGlRt~~~~~PEE~NR~l 141 (383)
T COG0381 72 T------LGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYL----KIPVGHVEAGLRTGDLYFPEEINRRL 141 (383)
T ss_pred C------HHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHh----CCceEEEecccccCCCCCcHHHHHHH
Confidence 1 11122334567888999999999999997665443 2233333 4998777653321 1 2234
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC---CCchHHHHHHcCCCCCCCEEEEecCCCCC--CcH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKP---VRPKVELRRELGMDEDLPAVLLMGGGEGM--GPI 365 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~---~~~~~~~r~~lgi~~~~~~il~~gg~~g~--k~~ 365 (536)
....++..+++++..++.|++.|+++++|.++||++-+-.... ..........+-.+.+++++++++-+... +.+
T Consensus 142 ~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~ 221 (383)
T COG0381 142 TSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPL 221 (383)
T ss_pred HHHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccH
Confidence 5678889999999999999999999999999999875433211 11111122221123445677777664331 455
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHH-HcCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKL-LSTDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEA 442 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l-~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEA 442 (536)
.+++.++.+.+. ..++..++.-.-..+.+++.. +.++..++|+++..++ ++..++..|-++++-||+. .=||
T Consensus 222 ~~i~~al~~i~~----~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDSGgi-qEEA 296 (383)
T COG0381 222 EEICEALREIAE----EYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDSGGI-QEEA 296 (383)
T ss_pred HHHHHHHHHHHH----hCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecCCch-hhhH
Confidence 666666665554 245565544444444343333 4445566788888764 8889999999999999844 5689
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
-.+|+||+++.....+.+ .++.|...++. +.+.+.+++..+++ +++.+++|+.....+....++++|++.+..
T Consensus 297 p~lg~Pvl~lR~~TERPE-----~v~agt~~lvg~~~~~i~~~~~~ll~-~~~~~~~m~~~~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 297 PSLGKPVLVLRDTTERPE-----GVEAGTNILVGTDEENILDAATELLE-DEEFYERMSNAKNPYGDGNASERIVEILLN 370 (383)
T ss_pred HhcCCcEEeeccCCCCcc-----ceecCceEEeCccHHHHHHHHHHHhh-ChHHHHHHhcccCCCcCcchHHHHHHHHHH
Confidence 999999999997665444 67788888886 88999999999999 999999999999999999999999999987
Q ss_pred HHhhc
Q 036427 522 LVRQR 526 (536)
Q Consensus 522 l~~~~ 526 (536)
...-.
T Consensus 371 ~~~~~ 375 (383)
T COG0381 371 YFDSL 375 (383)
T ss_pred Hhhhc
Confidence 66543
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=158.97 Aligned_cols=166 Identities=22% Similarity=0.235 Sum_probs=135.2
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHh
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMG 425 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~ 425 (536)
+..++++++++.|+.+.. .+++..+.+++. +-+.++++-.|... . ...+...|+...+|++. .+++.
T Consensus 233 ~~~d~~~vyvslGt~~~~--~~l~~~~~~a~~-----~l~~~vi~~~~~~~-~----~~~~~p~n~~v~~~~p~-~~~l~ 299 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA--VELLAIVLEALA-----DLDVRVIVSLGGAR-D----TLVNVPDNVIVADYVPQ-LELLP 299 (406)
T ss_pred hcCCCCeEEEEcCCcccH--HHHHHHHHHHHh-----cCCcEEEEeccccc-c----ccccCCCceEEecCCCH-HHHhh
Confidence 567788888888876644 566677777665 45667666665522 1 22346679999999965 57999
Q ss_pred hcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHH
Q 036427 426 ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~ 501 (536)
.||++|+++|.+|+.||+.+|+|+|+.|...+|.. |+..+.+.|+|..+. +++.++++|+++|+ ++..++...+
T Consensus 300 ~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~-nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~-~~~~~~~~~~ 377 (406)
T COG1819 300 RADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPL-NAERVEELGAGIALPFEELTEERLRAAVNEVLA-DDSYRRAAER 377 (406)
T ss_pred hcCEEEecCCcchHHHHHHcCCCEEEecCCcchhH-HHHHHHHcCCceecCcccCCHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 99999999999999999999999999999877765 899999999998875 79999999999999 9999988888
Q ss_pred HHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 502 NALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 502 ~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
..+......+..++++.|++..+++
T Consensus 378 ~~~~~~~~~g~~~~a~~le~~~~~~ 402 (406)
T COG1819 378 LAEEFKEEDGPAKAADLLEEFAREK 402 (406)
T ss_pred HHHHhhhcccHHHHHHHHHHHHhcc
Confidence 8888888888888999998877764
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.68 E-value=8e-15 Score=153.24 Aligned_cols=248 Identities=12% Similarity=0.041 Sum_probs=157.1
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCHHHHHHHHHhC
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
+.+.+++++..|....+ +... ...++++...|..... .+.+.+.+|.+++.|+...+.+.+++
T Consensus 100 ~~~~~i~~~~~P~~~~~----~~~~---~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~~~ 172 (373)
T cd04950 100 GFGRPILWYYTPYTLPV----AALL---QASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVFTTSPSLYEAKRRLN 172 (373)
T ss_pred CCCCcEEEEeCccHHHH----Hhhc---CCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEEECCHHHHHHHhhCC
Confidence 44556666666664322 2212 1367776655533211 13456789999999999998887765
Q ss_pred CCCCCEEEeCCCCCCCCCCCCCchH-HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEe
Q 036427 314 LQASQIKVYGLPVRPSFVKPVRPKV-ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVIC 392 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~~~~~~-~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~ 392 (536)
.++++++|+++.+.+.+..... ..+.. ...+.++++++|+... +...+++.++++. .+++++++ +
T Consensus 173 ---~~i~~i~ngvd~~~f~~~~~~~~~~~~~--~~~~~~~i~y~G~l~~-~~d~~ll~~la~~-------~p~~~~vl-i 238 (373)
T cd04950 173 ---PNVVLVPNGVDYEHFAAARDPPPPPADL--AALPRPVIGYYGAIAE-WLDLELLEALAKA-------RPDWSFVL-I 238 (373)
T ss_pred ---CCEEEcccccCHHHhhcccccCCChhHH--hcCCCCEEEEEecccc-ccCHHHHHHHHHH-------CCCCEEEE-E
Confidence 6799999999987665432111 01111 2235677888877554 3444566665543 46777644 5
Q ss_pred cCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--------C-hHHHHHHHHhCCcEEEeccCCccccC
Q 036427 393 GRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA--------G-PGTIAEAMIRGLPIILNDFIAGQEAG 461 (536)
Q Consensus 393 G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s--------G-~~tllEAma~GlPVI~~~~~~~~e~~ 461 (536)
|.++...+ .......+||+++|++ +++..+|+.+|++++|+ + |++++||||||+|||+++.+.
T Consensus 239 G~~~~~~~-~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~----- 312 (373)
T cd04950 239 GPVDVSID-PSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE----- 312 (373)
T ss_pred CCCcCccC-hhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH-----
Confidence 66521111 1111224689999998 59999999999999984 2 789999999999999987421
Q ss_pred ChhhHhhCC-ceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 462 NVPYVVENG-CGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 462 na~~lv~~g-~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++.+ .+.++ .|+++++++|.+++..+...+.. ++.+.+.+++|+..++.+.+.+.+
T Consensus 313 ----~~~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 313 ----VRRYEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ----HHhhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 23332 23344 48999999999976513222222 122267789999999999866654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=155.97 Aligned_cols=300 Identities=16% Similarity=0.139 Sum_probs=154.9
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||+|.++++|-||..++++++++|++ | |+|.++.......-.....++ . ....+....... .........
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~--g--~ev~~~~~~~~~~~~~~~~~~-~----~~~~p~~~~~~~-~~~~~~~~~ 70 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN--D--YEVSYIASGRSKNYISKYGFK-V----FETFPGIKLKGE-DGKVNIVKT 70 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC--C--CeEEEEEcCCHHHhhhhhcCc-c----eeccCCceEeec-CCcCcHHHH
Confidence 79999999977999999999999985 4 566544321110000000000 0 000000010000 000000011
Q ss_pred hhh--hhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCH
Q 036427 226 NFA--ATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 226 ~~~--~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~ 303 (536)
... ........+..+++++++||+||+++.+.. ..+++..+ ||.+.+.++....++..+ +. .+.
T Consensus 71 l~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~---~~aA~~~~----iP~i~i~~q~~~~~~~~~----~~---~~~ 136 (321)
T TIGR00661 71 LRNKEYSPKKAIRREINIIREYNPDLIISDFEYST---VVAAKLLK----IPVICISNQNYTRYPLKT----DL---IVY 136 (321)
T ss_pred HHhhccccHHHHHHHHHHHHhcCCCEEEECCchHH---HHHHHhcC----CCEEEEecchhhcCCccc----ch---hHH
Confidence 100 010123446678899999999999987654 34566665 999877654321111110 10 010
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCC----CCCCC---CCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHh
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPV----RPSFV---KPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv----~~~~~---~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l 376 (536)
.....+....-..+.+.+...+. .++.. ..+..+....+ + .+.+.+.+++++|+.+. ..++..+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~-~~~~~~~iLv~~g~~~~---~~l~~~l~~-- 209 (321)
T TIGR00661 137 PTMAALRIFNERCERFIVPDYPFPYTICPKIIKNMEGPLIRYDVDD-V-DNYGEDYILVYIGFEYR---YKILELLGK-- 209 (321)
T ss_pred HHHHHHHHhccccceEeeecCCCCCCCCccccccCCCcccchhhhc-c-ccCCCCcEEEECCcCCH---HHHHHHHHh--
Confidence 11111111100001110011010 01111 00001111111 1 12244667777765442 333333321
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh-hHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS-KMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~-~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
.+++. +++|......+ ....++.+.+|.+ ++.++|..||++|+++|.+|+.||+++|+|+|++|..
T Consensus 210 ------~~~~~--~i~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~ 276 (321)
T TIGR00661 210 ------IANVK--FVCYSYEVAKN-----SYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDL 276 (321)
T ss_pred ------CCCeE--EEEeCCCCCcc-----ccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCC
Confidence 23333 34443221111 2346899999984 8999999999999999999999999999999999987
Q ss_pred Cc-cccCChhhHhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 456 AG-QEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 456 ~~-~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
+. +|..|+..+.+.|.|..++ +. ++.+++.+.++
T Consensus 277 ~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 277 GQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRN 313 (321)
T ss_pred CcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccc
Confidence 53 4456999999999998885 34 44445555544
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-14 Score=147.05 Aligned_cols=268 Identities=14% Similarity=0.112 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCCc------ccccccccCCEEEEcCHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLSTC------HPTWFHKLVTRCYCPTADV 305 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~------~~~~~~~~~d~vi~~S~~~ 305 (536)
.....+.+++++++||+|++++.....+ ...++..++ ||++.+....... .++.+.+.++..+++++..
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~----IPv~HveaG~rs~~~~eE~~r~~i~~la~l~f~~t~~~ 155 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLN----IPIAHIHGGEVTEGAIDESIRHAITKLSHLHFVATEEY 155 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhC----CcEEEEECCccCCCCchHHHHHHHHHHHhhccCCCHHH
Confidence 3456888899999999999999654433 244455555 9988666543211 2445678889999999999
Q ss_pred HHHHHHhCCCCCCEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCC--CCcHHHHHHHHHHHhhhcccC
Q 036427 306 AKRAMKAGLQASQIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEG--MGPIEATARALGNALYDENLG 382 (536)
Q Consensus 306 ~~~l~~~g~~~~ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g--~k~~~~~l~al~~~l~~~~~~ 382 (536)
.+.+.+.|.++.++.++||+..+.... ....++.+.++++++.++++++++.-... .....+.+..+.+.+.+.
T Consensus 156 ~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~--- 232 (365)
T TIGR03568 156 RQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL--- 232 (365)
T ss_pred HHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---
Confidence 999999999999999999987665432 12235677888998755566655544322 222234455555555421
Q ss_pred CCCcEEEEEec-CCH-HHHHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCc
Q 036427 383 EPIGQVLVICG-RNK-KLANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 383 ~~~~~~lvi~G-~~~-~l~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~ 457 (536)
..++.+++-.+ .+. ...+.+++... .+++.+.+.. .++..+++.||++|+.|+++. .||+++|+|+|.+. .
T Consensus 233 ~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~ 308 (365)
T TIGR03568 233 NKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGI-IEAPSFGVPTINIG---T 308 (365)
T ss_pred ccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChhHH-HhhhhcCCCEEeec---C
Confidence 11232221112 222 33444444321 4679999976 589999999999999985444 89999999999764 2
Q ss_pred cccCChhhHhhCCceee-cC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHH
Q 036427 458 QEAGNVPYVVENGCGKF-SK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQD 518 (536)
Q Consensus 458 ~e~~na~~lv~~g~g~~-~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~ 518 (536)
.++ .++.|..++ +. +++++.+++.+++ +++.++.+...-..+....++++|++.
T Consensus 309 R~e-----~~~~g~nvl~vg~~~~~I~~a~~~~~--~~~~~~~~~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 309 RQK-----GRLRADSVIDVDPDKEEIVKAIEKLL--DPAFKKSLKNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred Cch-----hhhhcCeEEEeCCCHHHHHHHHHHHh--ChHHHHHHhhCCCCCCCChHHHHHHHh
Confidence 222 455565544 65 8999999999965 455444443322224555677777664
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-15 Score=145.45 Aligned_cols=301 Identities=17% Similarity=0.169 Sum_probs=187.4
Q ss_pred eEEEEe----CCCCchHHHHHHHHHHHHHhccCCceEEEEeec-ccccCCCCCCc-chhHHHHHHhhccccceeecCC-C
Q 036427 146 KVLILM----SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL-WSDHTPWPFNQ-LPRSYNFLVKHGPLWKMTYYGT-A 218 (536)
Q Consensus 146 KIL~~~----~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~-~~~~~~~~~~~-~~~~y~~~~~~~~l~~~~~~~~-~ 218 (536)
+|+.++ ..+ ||.+.+...|.+.|.+. ||.|++.+- +.+..+..... .-+.|- . .+...+.++ .
T Consensus 2 ~i~mVsdff~P~~-ggveshiy~lSq~li~l---ghkVvvithayg~r~girylt~glkVyy-----l-p~~v~~n~tT~ 71 (426)
T KOG1111|consen 2 RILMVSDFFYPST-GGVESHIYALSQCLIRL---GHKVVVITHAYGNRVGIRYLTNGLKVYY-----L-PAVVGYNQTTF 71 (426)
T ss_pred cceeeCcccccCC-CChhhhHHHhhcchhhc---CCeEEEEeccccCccceeeecCCceEEE-----E-eeeeeecccch
Confidence 566654 556 79999999999999999 888877643 23322221110 000110 0 011111111 1
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc--chHHHHHHHHcCCCCCceEEEEecCCC--C---cc----
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM--QHVPLRILRAKGLLKKIVFTTVITDLS--T---CH---- 287 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~--~~i~~~~~~~~g~~~~ip~v~~~~d~~--~---~~---- 287 (536)
+... ....-++.++.+++..+||.+.++. ++-.+..++..|+ .. +.+|.+ . .-
T Consensus 72 ptv~----------~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGl----kt--VfTdHSlfGfad~~si~~ 135 (426)
T KOG1111|consen 72 PTVF----------SDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGL----KT--VFTDHSLFGFADIGSILT 135 (426)
T ss_pred hhhh----------ccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCc----eE--EEeccccccccchhhhhh
Confidence 1111 1123445566677999999998753 2334555565662 22 333322 0 00
Q ss_pred c---ccccccCCEEEEcCHHHHHHHH-HhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 288 P---TWFHKLVTRCYCPTADVAKRAM-KAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 288 ~---~~~~~~~d~vi~~S~~~~~~l~-~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+ ..-....|+++|+|...++... +..++++++.++||.++...+.|...+ + -..+...+.++++....|
T Consensus 136 n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~---~----~S~~i~~ivv~sRLvyrK 208 (426)
T KOG1111|consen 136 NKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD---K----PSADIITIVVASRLVYRK 208 (426)
T ss_pred cceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc---c----CCCCeeEEEEEeeeeecc
Confidence 1 1223466889999887776533 335788999999999999888774322 0 112224556666665555
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---- 434 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---- 434 (536)
+.+.++..+. .+ +.+.|++++ +++|+|+ ++++.+++..+.++|.++|.+ +++.+.|..-|+++.+|
T Consensus 209 GiDll~~iIp-~v---c~~~p~vrf-ii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEa 283 (426)
T KOG1111|consen 209 GIDLLLEIIP-SV---CDKHPEVRF-IIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEA 283 (426)
T ss_pred chHHHHHHHH-HH---HhcCCCeeE-EEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHH
Confidence 5544433333 33 335788886 5568887 567778888889999999998 59999999999999998
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
.+++++|||+||+|||.+..++.+|. ...+.-... ++++++++++++.++
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeV------LP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEV------LPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCcccc------CCccceeccCCChHHHHHHHHHHHH
Confidence 58999999999999999998877663 333311122 257777777766665
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-13 Score=139.18 Aligned_cols=351 Identities=17% Similarity=0.179 Sum_probs=209.7
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE-EeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF-VTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~-v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
+|||.+.++.. .|...-+. |.++|+++.| +++.+ |+...-...+. ..+- .+..+.-.+ ++..
T Consensus 1 ~~ki~i~AGE~-SGDllGa~-LikaLk~~~~-~~efvGvgG~~m~aeG~--~sl~-~~~elsvmG-f~EV---------- 63 (381)
T COG0763 1 MLKIALSAGEA-SGDLLGAG-LIKALKARYP-DVEFVGVGGEKMEAEGL--ESLF-DMEELSVMG-FVEV---------- 63 (381)
T ss_pred CceEEEEeccc-chhhHHHH-HHHHHHhhCC-CeEEEEeccHHHHhccC--cccc-CHHHHHHhh-HHHH----------
Confidence 57999998877 67766555 7899999876 33322 22110001110 0000 000000000 0000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTR 297 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~ 297 (536)
. ...+......+++.+.+.+.+||++++.. |-.+.--...+|+.| +++|.++++.- .+.+.+ ..+.+.+|.
T Consensus 64 L--~~lp~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~--p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~ 139 (381)
T COG0763 64 L--GRLPRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAG--PKIKIIHYVSPSVWAWRPKRAVKIAKYVDH 139 (381)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhC--CCCCeEEEECcceeeechhhHHHHHHHhhH
Confidence 0 01112333456778888899999999865 433322233344444 35888877653 222222 235678999
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++..+...+.+.+.|++ .+++|+|+-+... ...+++.+|++++++.+.++++++-|+.+. .+..++..+.++.+
T Consensus 140 lLailPFE~~~y~k~g~~---~~yVGHpl~d~i~-~~~~r~~ar~~l~~~~~~~~lalLPGSR~s-EI~rl~~~f~~a~~ 214 (381)
T COG0763 140 LLAILPFEPAFYDKFGLP---CTYVGHPLADEIP-LLPDREAAREKLGIDADEKTLALLPGSRRS-EIRRLLPPFVQAAQ 214 (381)
T ss_pred eeeecCCCHHHHHhcCCC---eEEeCChhhhhcc-ccccHHHHHHHhCCCCCCCeEEEecCCcHH-HHHHHHHHHHHHHH
Confidence 999999999999999887 7899999877653 223467799999999999999998887653 34444444444444
Q ss_pred hcccCCCCcEEEEEecCCH--HHHHHHHcCC-CCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 378 DENLGEPIGQVLVICGRNK--KLANKLLSTD-WKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~-~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
....+.++.++++-.-... .......+.. ....+.+.+ .+-.+.|..||+.+..|| .+.+|++.+|+|+|+.-.
T Consensus 215 ~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSG-T~tLE~aL~g~P~Vv~Yk 291 (381)
T COG0763 215 ELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASG-TATLEAALAGTPMVVAYK 291 (381)
T ss_pred HHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhcc-HHHHHHHHhCCCEEEEEe
Confidence 3333468888766544332 1112111111 112333333 245789999999999998 667899999999999876
Q ss_pred CCccccCChhhHhhCCceee---------cC-------CHHHHHHHHHHHhCCCHHHHHHHHHHHHH---hcCCc-hHHH
Q 036427 455 IAGQEAGNVPYVVENGCGKF---------SK-------SPKEIANMVSQWFGPKIDELKAMSQNALK---LARPD-AVFR 514 (536)
Q Consensus 455 ~~~~e~~na~~lv~~g~g~~---------~~-------d~~~La~~I~~ll~~d~~~~~~m~~~a~~---~a~~~-~~~~ 514 (536)
...-...-+..++.-....+ ++ .++.|++++..++. |.+.++++.+..++ ..+.. ..+.
T Consensus 292 ~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l~~~l~~~~~~e~ 370 (381)
T COG0763 292 VKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLL-NGDRREALKEKFRELHQYLREDPASEI 370 (381)
T ss_pred ccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHcCCcHHHH
Confidence 43322222233333222111 11 69999999999999 88666666665443 33445 6777
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
.++.+.+++.
T Consensus 371 aA~~vl~~~~ 380 (381)
T COG0763 371 AAQAVLELLL 380 (381)
T ss_pred HHHHHHHHhc
Confidence 7777777654
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.5e-14 Score=137.79 Aligned_cols=357 Identities=16% Similarity=0.184 Sum_probs=210.3
Q ss_pred CCCCCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-CcchhHHHHHHhhcccccee--ec
Q 036427 140 ENDQPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLPRSYNFLVKHGPLWKMT--YY 215 (536)
Q Consensus 140 ~~~~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~~~y~~~~~~~~l~~~~--~~ 215 (536)
++.++|||+|.+.+ +|-||.++++.+|.+|.+... +.+|++++......+++. .++. .++.+++++.. .+
T Consensus 5 ~~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~-~~~Il~IsG~~~~~~F~~~~gVd-----~V~LPsl~k~~~G~~ 78 (400)
T COG4671 5 EASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYL-GFDILIISGGPPAGGFPGPAGVD-----FVKLPSLIKGDNGEY 78 (400)
T ss_pred chhccceEEEEehhhccchHHHHHHHHHHHHhhccc-CceEEEEeCCCccCCCCCcccCc-----eEecCceEecCCCce
Confidence 56677899999976 678999999999999999744 799999987666554443 2222 12333332211 00
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-ccc---chHHH-HHHHHcCCCCCceEEEEecCCCCc----
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH-PLM---QHVPL-RILRAKGLLKKIVFTTVITDLSTC---- 286 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~---~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~---- 286 (536)
....... . ..-...+...-+.+..+.+|||++|+.. |+- --.|+ ...+..+ .+.+...+|..+.
T Consensus 79 ~~~d~~~--~-l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~----t~~vL~lr~i~D~p~~~ 151 (400)
T COG4671 79 GLVDLDG--D-LEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTG----TRLVLGLRSIRDIPQEL 151 (400)
T ss_pred eeeecCC--C-HHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcC----CcceeehHhhhhchhhh
Confidence 0000000 0 0001112223455667889999999875 221 11122 2234333 2333333333221
Q ss_pred --------ccccccccCCEEEEcCHHHHHHHHH-hCCC---CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 287 --------HPTWFHKLVTRCYCPTADVAKRAMK-AGLQ---ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 287 --------~~~~~~~~~d~vi~~S~~~~~~l~~-~g~~---~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
.-..+.++.|.|++..+.....+.+ +.++ ..++..+|.--.+ .-....+..+ -++...+++
T Consensus 152 ~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~-~~~~~~p~~~------~pE~~~Ilv 224 (400)
T COG4671 152 EADWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRS-LPHLPLPPHE------APEGFDILV 224 (400)
T ss_pred ccchhhhHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeecc-CcCCCCCCcC------CCccceEEE
Confidence 1134567889998866555444433 4443 3566666654111 1000000000 022233444
Q ss_pred EecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE--EEEEecCC-H-HHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCe
Q 036427 355 LMGGGEGMGPIEATARALGNALYDENLGEPIGQ--VLVICGRN-K-KLANKLLST-DWKIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 355 ~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~--~lvi~G~~-~-~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv 429 (536)
.+||+.. -.+++.+++.+... .+++. .+++.|.. + ..++++... ...++|++..|..++..++..|+.
T Consensus 225 s~GGG~d---G~eLi~~~l~A~~~----l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~ 297 (400)
T COG4671 225 SVGGGAD---GAELIETALAAAQL----LAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL 297 (400)
T ss_pred ecCCChh---hHHHHHHHHHHhhh----CCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe
Confidence 4555322 24555555554431 23333 46777864 3 345555443 455789999999999999999999
Q ss_pred EEECCChHHHHHHHHhCCcEEEeccCCccc--cCChhhHhhCCceeec-C---CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 430 IITKAGPGTIAEAMIRGLPIILNDFIAGQE--AGNVPYVVENGCGKFS-K---SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 430 ~V~~sG~~tllEAma~GlPVI~~~~~~~~e--~~na~~lv~~g~g~~~-~---d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
+|+-+|.+|++|-+++|||.+++|.....| .--+..+.+.|..-++ + +++.|+++|...++ .|.. .
T Consensus 298 vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~-~P~~-------~ 369 (400)
T COG4671 298 VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALA-RPSP-------S 369 (400)
T ss_pred eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhccc-CCCC-------C
Confidence 999999999999999999999999875543 2336667777765544 3 78999999988887 3321 1
Q ss_pred HHhcCCchHHHHHHHHHHHHhhcCCcCC
Q 036427 504 LKLARPDAVFRIVQDLHELVRQRNFVPH 531 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~~~~~~~ 531 (536)
.....-.+.+++++.+.+++.+++.-+-
T Consensus 370 ~~~L~L~G~~~~a~~l~e~L~~~~~~~~ 397 (400)
T COG4671 370 KPHLDLEGLEHIARILAELLSTRSCEML 397 (400)
T ss_pred ccccCchhhHhHHHHHHHHhhhhccccC
Confidence 1233446888888888888887765543
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.1e-13 Score=141.52 Aligned_cols=281 Identities=12% Similarity=0.040 Sum_probs=175.0
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC--CCC--------cc----------------
Q 036427 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD--LST--------CH---------------- 287 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d--~~~--------~~---------------- 287 (536)
....+.+.+...++|++|+|. |+.+..+..+++... ++|.|...|. +.. .+
T Consensus 136 ~i~~~~~~~~~~~~dViH~He-Wm~g~a~~~lK~~~~--~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~ 212 (590)
T cd03793 136 FLGEFAEQFDDEPAVVAHFHE-WQAGVGLPLLRKRKV--DVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRG 212 (590)
T ss_pred HHHHHHhhccCCCCeEEEEcc-hhHhHHHHHHHHhCC--CCCEEEEecccccccccccCCcccchhhhhcchhhhhhccc
Confidence 333444443345789998764 555555666665432 4788754441 111 01
Q ss_pred -------cccccccCCEEEEcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCc----------------hHHHHHH
Q 036427 288 -------PTWFHKLVTRCYCPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRP----------------KVELRRE 343 (536)
Q Consensus 288 -------~~~~~~~~d~vi~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~----------------~~~~r~~ 343 (536)
.++....+|.++++|+.+++.+... +.++++ |+||++++..+....+ +..++..
T Consensus 213 I~~r~~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~ 290 (590)
T cd03793 213 IYHRYCIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGH 290 (590)
T ss_pred chHHHHHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhh
Confidence 1245678899999999999998874 777766 9999999988764421 1234566
Q ss_pred cCCCCCCCEEEEe-cCCCC-CCcHHHHHHHHHHHhhhcccCCCCcE---EEEEecC-C---------HH----HHHHHHc
Q 036427 344 LGMDEDLPAVLLM-GGGEG-MGPIEATARALGNALYDENLGEPIGQ---VLVICGR-N---------KK----LANKLLS 404 (536)
Q Consensus 344 lgi~~~~~~il~~-gg~~g-~k~~~~~l~al~~~l~~~~~~~~~~~---~lvi~G~-~---------~~----l~~~l~~ 404 (536)
+++++++++++++ |+-.- .|+.+.+++++.+.-........+.. ++++.+. + .. +++.+.+
T Consensus 291 ~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~ 370 (590)
T cd03793 291 YDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNS 370 (590)
T ss_pred cCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHH
Confidence 7888888888774 66544 57777777777654332111223222 3334332 1 01 1111100
Q ss_pred -------------------------------------------------------------------CCC----CCC--E
Q 036427 405 -------------------------------------------------------------------TDW----KIP--V 411 (536)
Q Consensus 405 -------------------------------------------------------------------~~~----~~~--V 411 (536)
.++ .++ |
T Consensus 371 i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkv 450 (590)
T cd03793 371 VKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKV 450 (590)
T ss_pred HHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEE
Confidence 000 112 4
Q ss_pred EEecC-h--------hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC--ceeecC
Q 036427 412 QVKGF-V--------SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG--CGKFSK 476 (536)
Q Consensus 412 ~~~G~-v--------~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g--~g~~~~ 476 (536)
.|.+. + .+..++|+.||++|.|| | |.+++|||+||+|+|+++..+-.+ .+..++..+ .|+.+.
T Consensus 451 if~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~--~v~E~v~~~~~~gi~V~ 528 (590)
T cd03793 451 VFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGC--FMEEHIEDPESYGIYIV 528 (590)
T ss_pred EEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhh--hhHHHhccCCCceEEEe
Confidence 44442 2 14789999999999999 4 899999999999999999765422 122344332 355442
Q ss_pred ---------CHHHHHHHHHHHhCCCHHHHHHHHHHHH--HhcCCchHHHHHHHHHHHH
Q 036427 477 ---------SPKEIANMVSQWFGPKIDELKAMSQNAL--KLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 477 ---------d~~~La~~I~~ll~~d~~~~~~m~~~a~--~~a~~~~~~~i~~~i~~l~ 523 (536)
+.++|+++|.++++ . +.++.+.++++ +.+..+.|++.+..+.+..
T Consensus 529 ~r~~~~~~e~v~~La~~m~~~~~-~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 529 DRRFKSPDESVQQLTQYMYEFCQ-L-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred cCCccchHHHHHHHHHHHHHHhC-C-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 57889999999887 4 45666666655 7888899999998887654
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-14 Score=154.81 Aligned_cols=262 Identities=12% Similarity=0.110 Sum_probs=171.2
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----cccc---cc--cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHPT---WF--HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~~---~~--~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
..|+|+++.+.+..+|..+ ++.+ .+.|+..+.| .+.. +.+. .+ .-.+|.+...+....+.+...
T Consensus 131 ~~d~iwihDyhl~llp~~l-r~~~--~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~ 207 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQML-RERG--PDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCS 207 (460)
T ss_pred CCCEEEEeChhhhHHHHHH-HhhC--CCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHH
Confidence 4589999988666666544 3333 2356665444 4321 1111 01 124788888887666554441
Q ss_pred ---CC------------CCCCEEEeCCCCCCCCCCCCCc----hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 313 ---GL------------QASQIKVYGLPVRPSFVKPVRP----KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 313 ---g~------------~~~ki~vignpv~~~~~~~~~~----~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+. ...++.++++++|++.+.+... ++.+++..+..++.++|+++|+....|++..+++++.
T Consensus 208 ~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~ 287 (460)
T cd03788 208 RLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFE 287 (460)
T ss_pred HHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHH
Confidence 11 1235789999999876653321 1223344555667788889999888899888888886
Q ss_pred HHhhhcccCCCC----cEEEEEec----CCH---HHHHHHHcC----CC------CCCEEE-ecCh--hhHHHHHhhcCe
Q 036427 374 NALYDENLGEPI----GQVLVICG----RNK---KLANKLLST----DW------KIPVQV-KGFV--SKMEEAMGACDC 429 (536)
Q Consensus 374 ~~l~~~~~~~~~----~~~lvi~G----~~~---~l~~~l~~~----~~------~~~V~~-~G~v--~~l~~ll~~aDv 429 (536)
..+. ..|+ +.++++++ .++ ++.+.++++ +. ..+|.+ .|++ +++.++|+.||+
T Consensus 288 ~ll~----~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv 363 (460)
T cd03788 288 RLLE----RYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADV 363 (460)
T ss_pred HHHH----hChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccE
Confidence 6554 2343 34444432 222 233333322 11 123544 4654 699999999999
Q ss_pred EEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHH
Q 036427 430 IITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 430 ~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m 499 (536)
+|+|| | +++++|||+||+| +|+++..+..+. ...|.+++ |+++++++|.++++++++.++.+
T Consensus 364 ~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~ 435 (460)
T cd03788 364 ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVNPYDIDEVADAIHRALTMPLEERRER 435 (460)
T ss_pred EEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 99998 5 8999999999999 888875543332 23455654 99999999999998556788999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHH
Q 036427 500 SQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 500 ~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
++++++....+.++++++.++.-
T Consensus 436 ~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 436 HRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999999999998887654
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.4e-13 Score=137.89 Aligned_cols=259 Identities=17% Similarity=0.196 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEec-CCCCccc---ccccccCCEEEEcCHHHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHP---TWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~---~~~~~~~d~vi~~S~~~~~ 307 (536)
...+++.+.+++.+||+||..+ |-.+.--...+++.|. ++|+++++. ..+.+.+ +.+.+.+|.++|..+...+
T Consensus 69 ~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~--~~~viyYI~PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~ 146 (373)
T PF02684_consen 69 RLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGI--PIKVIYYISPQVWAWRPGRAKKIKKYVDHLLVIFPFEPE 146 (373)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCC--CceEEEEECCceeeeCccHHHHHHHHHhheeECCcccHH
Confidence 4456888889999999998755 4333222334455552 245776665 3332222 3467889999999999999
Q ss_pred HHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 308 RAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 308 ~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.+.++|++ +.++|||+-+...... ++...++.+ ++++.++|.++.|+.. ..+..++..+.+.........++.+
T Consensus 147 ~y~~~g~~---~~~VGHPl~d~~~~~~-~~~~~~~~~-l~~~~~iIaLLPGSR~-~EI~rllP~~l~aa~~l~~~~p~l~ 220 (373)
T PF02684_consen 147 FYKKHGVP---VTYVGHPLLDEVKPEP-DRAEAREKL-LDPDKPIIALLPGSRK-SEIKRLLPIFLEAAKLLKKQRPDLQ 220 (373)
T ss_pred HHhccCCC---eEEECCcchhhhccCC-CHHHHHHhc-CCCCCcEEEEeCCCCH-HHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 99999865 8899999877654332 345666777 8999999988888754 2344444444444433333568888
Q ss_pred EEEEecCCH--H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 388 VLVICGRNK--K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 388 ~lvi~G~~~--~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+++.+.... + +.+.+..... ++.+.-..++..++|+.||+.+..|| ++.+|++.+|+|.|+.-....-...-++
T Consensus 221 fvvp~a~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak 297 (373)
T PF02684_consen 221 FVVPVAPEVHEELIEEILAEYPP--DVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAK 297 (373)
T ss_pred EEEecCCHHHHHHHHHHHHhhCC--CCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 766544332 1 1222333222 22222223467899999999999998 6678999999999998765433333344
Q ss_pred hHhhCCceeec-------------C---CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 465 YVVENGCGKFS-------------K---SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 465 ~lv~~g~g~~~-------------~---d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
.+++-..-.+. . +++.+++.+..++. |++.++......
T Consensus 298 ~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~-~~~~~~~~~~~~ 351 (373)
T PF02684_consen 298 RLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLE-NPEKRKKQKELF 351 (373)
T ss_pred HhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 45443222111 1 79999999999999 887655444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=134.11 Aligned_cols=160 Identities=21% Similarity=0.284 Sum_probs=121.4
Q ss_pred hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEE
Q 036427 337 KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 337 ~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~ 413 (536)
++..+...+.+.++++++++|+....++...++.++.....+ ..+++. ++++|.+. .+....+......++.+
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~---~~~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK---KNPNYK-LVIVGDGEYKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH---HHTTEE-EEEESHCCHHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh---cCCCeE-EEEEcccccccccccccccccccccccc
Confidence 456777888888888999999888888888888877665421 024554 56667443 34555666678889999
Q ss_pred ecChh--hHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHH
Q 036427 414 KGFVS--KMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMV 485 (536)
Q Consensus 414 ~G~v~--~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I 485 (536)
.|+.+ ++.++|+.||++|++| +|.+++|||++|+|+|+++.++..+ .+.+...|.+++ ++++++++|
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e-----~~~~~~~g~~~~~~~~~~l~~~i 152 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNE-----IINDGVNGFLFDPNDIEELADAI 152 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHH-----HSGTTTSEEEESTTSHHHHHHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCce-----eeccccceEEeCCCCHHHHHHHH
Confidence 99996 9999999999999997 4899999999999999999544333 233444577775 789999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHh
Q 036427 486 SQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 486 ~~ll~~d~~~~~~m~~~a~~~ 506 (536)
..+++ +++.++.|+++++++
T Consensus 153 ~~~l~-~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 153 EKLLN-DPELRQKLGKNARER 172 (172)
T ss_dssp HHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHC-CHHHHHHHHHHhcCC
Confidence 99999 999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-13 Score=144.82 Aligned_cols=261 Identities=16% Similarity=0.194 Sum_probs=172.8
Q ss_pred hhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHHH
Q 036427 244 KYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAMK 311 (536)
Q Consensus 244 ~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~~ 311 (536)
..+| |+|.++..-+..+|..+ ++.+. +.++..+.| -+.. ..+ ..+ .-.+|.+-..+....+.+..
T Consensus 124 ~~~~~d~vwvhDYhl~l~p~~l-r~~~~--~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~ 200 (456)
T TIGR02400 124 LLQPGDIVWVHDYHLMLLPAML-RELGV--QNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLS 200 (456)
T ss_pred hCCCCCEEEEecchhhHHHHHH-HhhCC--CCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3444 68888877665555544 44332 245544443 2211 111 011 23578888888888877665
Q ss_pred h-----CC-----------CCCCEEEeCCCCCCCCCCCCCch-------HHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 312 A-----GL-----------QASQIKVYGLPVRPSFVKPVRPK-------VELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 312 ~-----g~-----------~~~ki~vignpv~~~~~~~~~~~-------~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
. |+ ...++.++++++|.+.+.+.... ..+|+++ .++++|+.+|+....|++...
T Consensus 201 ~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi~~l 277 (456)
T TIGR02400 201 AVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGLPER 277 (456)
T ss_pred HHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCHHHH
Confidence 2 22 23357799999998876432111 1345555 356788889988888999888
Q ss_pred HHHHHHHhhhcccCCCC----cEEEEEe----cCCH---HHHHHHHcC-----------CCCCCEEEec-Ch--hhHHHH
Q 036427 369 ARALGNALYDENLGEPI----GQVLVIC----GRNK---KLANKLLST-----------DWKIPVQVKG-FV--SKMEEA 423 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~----~~~lvi~----G~~~---~l~~~l~~~-----------~~~~~V~~~G-~v--~~l~~l 423 (536)
++++...+. .+|+ ..+++++ |.++ ++++.+++. ++. .+++.+ .+ +++.++
T Consensus 278 l~A~~~ll~----~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~-pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 278 LLAFERFLE----EHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWT-PIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHHHH----hCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCc-cEEEEcCCCCHHHHHHH
Confidence 888876654 2343 3344444 2333 233344332 111 244444 43 699999
Q ss_pred HhhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 424 MGACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 424 l~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
|+.||+++++| | +++++||||||+| +|++...+..+ .+ . .|.+++ |+++++++|.+++++++
T Consensus 353 y~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~-----~l-~--~gllVnP~d~~~lA~aI~~aL~~~~ 424 (456)
T TIGR02400 353 YRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ-----EL-N--GALLVNPYDIDGMADAIARALTMPL 424 (456)
T ss_pred HHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH-----Hh-C--CcEEECCCCHHHHHHHHHHHHcCCH
Confidence 99999999998 5 8999999999999 99988655333 23 2 456664 99999999999999778
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
+.++++.++.+++...+.+.++++.+++.+
T Consensus 425 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 425 EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 889999999999988899999998877654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-13 Score=140.18 Aligned_cols=232 Identities=18% Similarity=0.221 Sum_probs=151.9
Q ss_pred HHHHHHHhhCC-CEEEEcCcccch--HHHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCH
Q 036427 237 EVAKGLMKYQP-DIIISVHPLMQH--VPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTA 303 (536)
Q Consensus 237 ~l~~~l~~~kP-DvVi~~~~~~~~--i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~ 303 (536)
++.+++...+| |+||.+.|.... ++..+.++.... ++|++..+||+.... ..++.+.+|.++++|+
T Consensus 54 ~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~-~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~ 132 (333)
T PRK09814 54 RLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKK-QVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSK 132 (333)
T ss_pred HHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHc-CCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCH
Confidence 45566788888 999998876543 122222221111 389999999875311 1356788999999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
.+++.+.+.|++..++.++++......... +. .....+.++++|+.... .. +.+ ..
T Consensus 133 ~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~---~~-------~~~~~~~i~yaG~l~k~----~~---l~~-------~~ 188 (333)
T PRK09814 133 KMKDRLVEEGLTTDKIIVQGIFDYLNDIEL---VK-------TPSFQKKINFAGNLEKS----PF---LKN-------WS 188 (333)
T ss_pred HHHHHHHHcCCCcCceEecccccccccccc---cc-------cccCCceEEEecChhhc----hH---HHh-------cC
Confidence 999999999988778877765433211110 00 11234567777664311 11 111 12
Q ss_pred CCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCe-EEEC--------------CChHHHHHHHHhC
Q 036427 384 PIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDC-IITK--------------AGPGTIAEAMIRG 446 (536)
Q Consensus 384 ~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv-~V~~--------------sG~~tllEAma~G 446 (536)
++++ ++++|.+++.. ...++|+|.|++ +++..+|+. |+ +|.. ..|..+.|+|+||
T Consensus 189 ~~~~-l~i~G~g~~~~------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G 260 (333)
T PRK09814 189 QGIK-LTVFGPNPEDL------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG 260 (333)
T ss_pred CCCe-EEEECCCcccc------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC
Confidence 4565 45678876321 234689999998 488888887 43 3321 1267899999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+|||+.+..+ .++.+.+.++|+++++.+++++++..+ +++.+++|++++++.+..
T Consensus 261 ~PVI~~~~~~-----~~~~V~~~~~G~~v~~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 261 LPVIVWSKAA-----IADFIVENGLGFVVDSLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred CCEEECCCcc-----HHHHHHhCCceEEeCCHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 9999987433 334466788899999999999999885 457788899998886543
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6e-12 Score=135.92 Aligned_cols=174 Identities=13% Similarity=0.072 Sum_probs=129.0
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEec
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKG 415 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G 415 (536)
+++.+.+.- ..+++|++..|+... .-..+.+..+.+++.. .+.++++..+.... . .+..+||.+.+
T Consensus 285 ~~l~~fl~~-~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~-----l~~~viw~~~~~~~--~----~~~p~Nv~i~~ 352 (507)
T PHA03392 285 DYLEEFLNN-STNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKK-----LPYNVLWKYDGEVE--A----INLPANVLTQK 352 (507)
T ss_pred HHHHHHHhc-CCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHh-----CCCeEEEEECCCcC--c----ccCCCceEEec
Confidence 344444322 223577777776432 1234566667666652 23566665553221 1 23567999999
Q ss_pred ChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHh
Q 036427 416 FVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWF 489 (536)
Q Consensus 416 ~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll 489 (536)
|++. .++| ..++++|+++|.+++.||+.+|+|+|++|...+|.. |+..+++.|+|..++ +.++|.++|.+++
T Consensus 353 w~Pq-~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~-Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl 430 (507)
T PHA03392 353 WFPQ-RAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFY-NTNKYVELGIGRALDTVTVSAAQLVLAIVDVI 430 (507)
T ss_pred CCCH-HHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHH-HHHHHHHcCcEEEeccCCcCHHHHHHHHHHHh
Confidence 9975 6778 569999999999999999999999999999988875 999999999998774 7899999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHhhc
Q 036427 490 GPKIDELKAMSQNALKLARP--DAVFRIVQDLHELVRQR 526 (536)
Q Consensus 490 ~~d~~~~~~m~~~a~~~a~~--~~~~~i~~~i~~l~~~~ 526 (536)
+ ||++++++.+.++.+..+ .+.++.+.-++.+++.+
T Consensus 431 ~-~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 431 E-NPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred C-CHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCC
Confidence 9 999999998888776654 47788888887777654
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.6e-14 Score=142.98 Aligned_cols=270 Identities=16% Similarity=0.125 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecC-----CC-----CcccccccccCCEEEEc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITD-----LS-----TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d-----~~-----~~~~~~~~~~~d~vi~~ 301 (536)
.....+.+.+.+.+||+|++.+.....+. ..++..++ ||++.+... .. ...+..+.+.++..+++
T Consensus 54 ~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~----ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~ 129 (346)
T PF02350_consen 54 LAIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLN----IPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAP 129 (346)
T ss_dssp HHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-----EEEEES-----S-TTSSTTHHHHHHHHHHH-SEEEES
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhC----CCEEEecCCCCccccCCCCchhhhhhhhhhhhhhhccC
Confidence 34567888999999999999997655443 33344444 998766543 21 02235567899999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC-CCchHHH-HHHcCCCCCCCEEEEecCCCCCCcH---HHHHHHHHHHh
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKP-VRPKVEL-RRELGMDEDLPAVLLMGGGEGMGPI---EATARALGNAL 376 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~-~~~~~~~-r~~lgi~~~~~~il~~gg~~g~k~~---~~~l~al~~~l 376 (536)
++..++.+.+.|.++++|+++|++.-+..... ....+.. ...+.-...+++++++.-....... ...+..+.+++
T Consensus 130 t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L 209 (346)
T PF02350_consen 130 TEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKAL 209 (346)
T ss_dssp SHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999865543211 0001111 1111002456777777654443321 22333333444
Q ss_pred hhcccCCCCcEEEEEecCCHHH----HHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEE
Q 036427 377 YDENLGEPIGQVLVICGRNKKL----ANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPII 450 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l----~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI 450 (536)
.+ .+++.+++.....+.. .+.+++. .++.+.... .++-.+|+.|+++|+-|| +..-||.++|+|+|
T Consensus 210 ~~----~~~~~vi~~~hn~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~eEa~~lg~P~v 281 (346)
T PF02350_consen 210 AE----RQNVPVIFPLHNNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQEEAPSLGKPVV 281 (346)
T ss_dssp HH----HTTEEEEEE--S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESSH-HHHHHGGGGT--EE
T ss_pred Hh----cCCCcEEEEecCCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcCc-cHHHHHHHhCCeEE
Confidence 32 2457777777655533 3334433 389888776 488999999999999998 44449999999999
Q ss_pred EeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036427 451 LNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLH 520 (536)
Q Consensus 451 ~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~ 520 (536)
.+...+.++. ....|.+.++. +++++.++|.++++ +++.+.++.....-+...++.++|++.|+
T Consensus 282 ~iR~~geRqe-----~r~~~~nvlv~~~~~~I~~ai~~~l~-~~~~~~~~~~~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 282 NIRDSGERQE-----GRERGSNVLVGTDPEAIIQAIEKALS-DKDFYRKLKNRPNPYGDGNASERIVEILK 346 (346)
T ss_dssp ECSSS-S-HH-----HHHTTSEEEETSSHHHHHHHHHHHHH--HHHHHHHHCS--TT-SS-HHHHHHHHHH
T ss_pred EecCCCCCHH-----HHhhcceEEeCCCHHHHHHHHHHHHh-ChHHHHhhccCCCCCCCCcHHHHHHHhhC
Confidence 9865444443 66677777675 89999999999998 66666665554445777788888887763
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.8e-12 Score=134.82 Aligned_cols=260 Identities=18% Similarity=0.269 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCEEEEcCHHHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~vi~~S~~~~~ 307 (536)
...+++.+.+++.+||++++.+ |-.+.--+..+|+.|. ++|+++++.- .+...+ +.+.+.+|.++|..+...+
T Consensus 297 ~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi--~ipviyYVsPqVWAWR~~Rikki~k~vD~ll~IfPFE~~ 374 (608)
T PRK01021 297 YRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGY--KGKIVHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQN 374 (608)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCC--CCCEEEEECccceeeCcchHHHHHHHhhhheecCccCHH
Confidence 3456888889999999999854 4443222334455552 2588877653 322222 3457889999999999999
Q ss_pred HHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 308 RAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 308 ~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.+.++|++ ++.+|+|+-+... ...++++.+++++++++.+++.++-|+.. ..+..++..+.++.+...+ .++.+
T Consensus 375 ~y~~~gv~---v~yVGHPL~d~i~-~~~~~~~~r~~lgl~~~~~iIaLLPGSR~-~EI~rllPv~l~aa~~~~l-~~~l~ 448 (608)
T PRK01021 375 LFKDSPLR---TVYLGHPLVETIS-SFSPNLSWKEQLHLPSDKPIVAAFPGSRR-GDILRNLTIQVQAFLASSL-ASTHQ 448 (608)
T ss_pred HHHhcCCC---eEEECCcHHhhcc-cCCCHHHHHHHcCCCCCCCEEEEECCCCH-HHHHHHHHHHHHHHHHHHh-ccCeE
Confidence 99998876 7899999877633 23345678899999888888888888754 3444555555544430011 13456
Q ss_pred EEEEecCCH--H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 388 VLVICGRNK--K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 388 ~lvi~G~~~--~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+++...... + +.+.+++.+. .++.++.- ++-.++|++||+.+..|| .+.+|++.+|+|.|+.-....-...-++
T Consensus 449 fvvp~a~~~~~~~i~~~~~~~~~-~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak 525 (608)
T PRK01021 449 LLVSSANPKYDHLILEVLQQEGC-LHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAK 525 (608)
T ss_pred EEEecCchhhHHHHHHHHhhcCC-CCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHH
Confidence 655433322 1 2222322110 13343321 123699999999999998 6678999999999997765432222333
Q ss_pred hHhhC------------Ccee---ec---C--CHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 036427 465 YVVEN------------GCGK---FS---K--SPKEIANMVSQWFGPKIDELKAMSQNALK 505 (536)
Q Consensus 465 ~lv~~------------g~g~---~~---~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~ 505 (536)
.+++- |..+ ++ + +++.+++++ +++. |++.++++.+.-.+
T Consensus 526 ~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~-d~~~r~~~~~~l~~ 584 (608)
T PRK01021 526 YIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILK-TSQSKEKQKDACRD 584 (608)
T ss_pred HHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhc-CHHHHHHHHHHHHH
Confidence 34431 1111 23 1 699999996 8888 88777777765544
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-11 Score=124.50 Aligned_cols=328 Identities=18% Similarity=0.135 Sum_probs=192.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccc-cceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPL-WKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l-~~~~~~~~~~~~~~ 223 (536)
|||||-.... .|..-...+++.|.++ ||+|+++....+.. ..+.+.-.+ +...... ...
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~---GheV~it~R~~~~~-----------~~LL~~yg~~y~~iG~~-g~~--- 60 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKR---GHEVLITARDKDET-----------EELLDLYGIDYIVIGKH-GDS--- 60 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhC---CCEEEEEEeccchH-----------HHHHHHcCCCeEEEcCC-CCC---
Confidence 8999998887 6999999999999999 89999886543210 001111100 0000000 001
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCCcccccccccCCEEEEcC
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~~~~~~~~d~vi~~S 302 (536)
...+.........++.+++++++||++++.+... ...++...| +|.+.+..+ ......+...+++|.++++.
T Consensus 61 ~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~~---a~~va~~lg----iP~I~f~D~e~a~~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 61 LYGKLLESIERQYKLLKLIKKFKPDVAISFGSPE---AARVAFGLG----IPSIVFNDTEHAIAQNRLTLPLADVIITPE 133 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcHH---HHHHHHHhC----CCeEEEecCchhhccceeehhcCCeeECCc
Confidence 1111122334456888889999999999877543 233455455 888766543 22223355678899999887
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCCC---CcHHHHHHHHHHHhhh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEGM---GPIEATARALGNALYD 378 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g~---k~~~~~l~al~~~l~~ 378 (536)
-.-...+.++|.. .++. .++++.+..+- +-.+.+++.+++|+++ .++|++=.-.+.. ..-..++..+.+.+.+
T Consensus 134 ~~~~~~~~~~G~~-~~i~-~y~G~~E~ayl~~F~Pd~~vl~~lg~~~-~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~ 210 (335)
T PF04007_consen 134 AIPKEFLKRFGAK-NQIR-TYNGYKELAYLHPFKPDPEVLKELGLDD-EPYIVVRPEAWKASYDNGKKSILPEIIEELEK 210 (335)
T ss_pred ccCHHHHHhcCCc-CCEE-EECCeeeEEeecCCCCChhHHHHcCCCC-CCEEEEEeccccCeeecCccchHHHHHHHHHh
Confidence 6666666677765 4554 24455443221 2244678889999875 4666542222111 1112334555555542
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCcc
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~ 458 (536)
....++++ ...++..+..++. ++.+....=+..+++..||++|..+| ....||+.+|+|+|.+-.+.
T Consensus 211 -----~~~~vV~i-pr~~~~~~~~~~~----~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~~g~-- 277 (335)
T PF04007_consen 211 -----YGRNVVII-PRYEDQRELFEKY----GVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCFPGK-- 277 (335)
T ss_pred -----hCceEEEe-cCCcchhhHHhcc----CccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEecCCc--
Confidence 22223333 3333233333432 24444433355689999999998766 55689999999999874321
Q ss_pred ccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
....-+++++.|.-....|++++.+.+...+. .. .+.+....++..+.|++.|++++
T Consensus 278 ~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~-~~-------~~~~~~~~~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 278 LLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLG-KR-------KKIREKKSEDPTDLIIEEIEEYI 334 (335)
T ss_pred chhHHHHHHHCCCeEecCCHHHHHHHHHHhhh-cc-------cchhhhhccCHHHHHHHHHHHhh
Confidence 11234568888875566799999887766554 21 12222223677788888888765
|
They are found in archaea and some bacteria and have no known function. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-13 Score=130.38 Aligned_cols=303 Identities=16% Similarity=0.128 Sum_probs=168.0
Q ss_pred ceEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEee-cccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 145 KKVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTD-LWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 145 mKIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~-~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|||+|.|.+ .|+||++|.+.||++|.+. |.+++... ...+. +. |. .++.. ....
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~---~~~~~fl~k~~~e~-------~~--~~-~~~~f---~~~~------ 58 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKR---GFACLFLTKQDIEA-------II--HK-VYEGF---KVLE------ 58 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhc---CceEEEecccchhh-------hh--hh-hhhhc---ccee------
Confidence 799999854 7899999999999999998 66664432 22111 00 00 11110 0000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCcccccccccCCEEE
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCY 299 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi 299 (536)
. +....|++.++|++|.++.-...--. .+....+ .+.+. ..|.. .+ ...|..+
T Consensus 59 -~--------------~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~----~k~l~-fDd~~---~~---~~~d~d~ 112 (318)
T COG3980 59 -G--------------RGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAG----SKILI-FDDEN---AK---SFKDNDL 112 (318)
T ss_pred -e--------------ecccccccccCCEEEEeccCCCHHHHHHHHHHhC----CcEEE-ecCCC---cc---chhhhHh
Confidence 0 11125888999999998755432111 2222333 33322 22221 11 1123323
Q ss_pred EcCHHHHHHHHHhCCCCCCEE-EeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMKAGLQASQIK-VYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~-vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
++..... ....++.-+.+.. ..|. +++++|+.. +++.+++ +.+.+++.+||+.. +++ ...++..
T Consensus 113 ivN~~~~-a~~~y~~v~~k~~~~lGp~y~~lr~eF~~~---r~~~~~r----~~r~ilI~lGGsDp-k~l---t~kvl~~ 180 (318)
T COG3980 113 IVNAILN-ANDYYGLVPNKTRYYLGPGYAPLRPEFYAL---REENTER----PKRDILITLGGSDP-KNL---TLKVLAE 180 (318)
T ss_pred hhhhhhc-chhhccccCcceEEEecCCceeccHHHHHh---HHHHhhc----chheEEEEccCCCh-hhh---HHHHHHH
Confidence 2232222 2233444444443 3333 456655432 2222211 22334555666543 332 2222223
Q ss_pred hhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 376 LYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
+. ..+..+-++.|... .+.+..+.....+++.+.-..++|+++|..||+.|+.+| .|+.||+..|+|.++.+.
T Consensus 181 L~-----~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~~ 254 (318)
T COG3980 181 LE-----QKNVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLPL 254 (318)
T ss_pred hh-----ccCeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEee
Confidence 32 12244445556443 344444434456788888888899999999999998654 899999999999888876
Q ss_pred CCccccCChhhHhhCCceeec---CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHH
Q 036427 455 IAGQEAGNVPYVVENGCGKFS---KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRI 515 (536)
Q Consensus 455 ~~~~e~~na~~lv~~g~g~~~---~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i 515 (536)
..+|.. .+.++...|...-. -.+......+..+.+ |+..|+.+....+......+..+|
T Consensus 255 a~NQ~~-~a~~f~~lg~~~~l~~~l~~~~~~~~~~~i~~-d~~~rk~l~~~~~~i~dg~g~~rI 316 (318)
T COG3980 255 AENQIA-TAKEFEALGIIKQLGYHLKDLAKDYEILQIQK-DYARRKNLSFGSKLIGDGRGFLRI 316 (318)
T ss_pred eccHHH-HHHHHHhcCchhhccCCCchHHHHHHHHHhhh-CHHHhhhhhhccceeeccccceec
Confidence 665542 55556665543332 245566677888888 999998888776666555555444
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-12 Score=122.76 Aligned_cols=215 Identities=16% Similarity=0.133 Sum_probs=130.4
Q ss_pred EEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 147 VLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 147 IL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
|++++... +||+.+++..|++.|.+. |++|.+...
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~v~~~--------------------------------------- 38 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARR---GHEVEVVAL--------------------------------------- 38 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHc---CCeEEEEEe---------------------------------------
Confidence 34555443 689999999999999998 778877650
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcC
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S 302 (536)
....+.+.+++.+||+||++.+....... ...+.. ++|++...++...... .....
T Consensus 39 ----------~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~-~~~~~-------- 95 (229)
T cd01635 39 ----------LLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLL----GIPLVLTVHGVNRSLL-EGVPL-------- 95 (229)
T ss_pred ----------chHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhC----CCCEEEEEcCccHhhc-ccCcH--------
Confidence 00133345667899999999876544322 222222 3787777776531111 00000
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~ 382 (536)
...... ... ....++|+....++...+++++..... .
T Consensus 96 -~~~~~~----~~~----------------------------------~~~~~~g~~~~~k~~~~~~~a~~~l~~----~ 132 (229)
T cd01635 96 -SLLALS----IGL----------------------------------ADKVFVGRLAPEKGLDDLIEAFALLKE----R 132 (229)
T ss_pred -HHHHHH----Hhh----------------------------------cceEEEEeecccCCHHHHHHHHHHHHH----h
Confidence 000000 000 001156666666676666666655432 2
Q ss_pred CCCcEEEEEecCCHH-HHHH-HHcCCCCCCEEEecCh---hhHHHHHhhcCeEEECCC----hHHHHHHHHhCCcEEEec
Q 036427 383 EPIGQVLVICGRNKK-LANK-LLSTDWKIPVQVKGFV---SKMEEAMGACDCIITKAG----PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 383 ~~~~~~lvi~G~~~~-l~~~-l~~~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG----~~tllEAma~GlPVI~~~ 453 (536)
.++++++++++..++ ..+. ..+.....+|.++|++ +++..+++.||++++++. |++++|||++|+|+|+++
T Consensus 133 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~ 212 (229)
T cd01635 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATD 212 (229)
T ss_pred CCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcC
Confidence 356776555433332 2222 4455667899999995 466677777999999983 899999999999999999
Q ss_pred cCCccccCChhhHhhCCceee
Q 036427 454 FIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~ 474 (536)
.++..+. +.+.+.|.+
T Consensus 213 ~~~~~e~-----i~~~~~g~~ 228 (229)
T cd01635 213 VGGPPEI-----VEDGLTGLL 228 (229)
T ss_pred CCCcceE-----EECCCceEE
Confidence 8765553 444455543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.7e-12 Score=128.52 Aligned_cols=252 Identities=11% Similarity=0.061 Sum_probs=149.4
Q ss_pred HHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCEEEEcCHHHHHHHH
Q 036427 236 REVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~vi~~S~~~~~~l~ 310 (536)
+++.+.+ .+||+++..+ |-++.--...+++.+ .++|+++++.- .+.+.+ +.+.+.+|.+++..+...+.+
T Consensus 68 ~~~~~~~--~~pd~~i~iD~p~Fnl~lak~~k~~~--~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~y- 142 (347)
T PRK14089 68 KEMVELA--KQADKVLLMDSSSFNIPLAKKIKKAY--PKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFY- 142 (347)
T ss_pred HHHHHHh--cCCCEEEEeCCCCCCHHHHHHHHhcC--CCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHh-
Confidence 3444443 6899999855 433321233344442 24898877653 332222 345778899998777655554
Q ss_pred HhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEE
Q 036427 311 KAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLV 390 (536)
Q Consensus 311 ~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lv 390 (536)
|+ +..++|+|+.+..... +.. ++ +.++|++++|+.+.+- ..++..+.++..... .... ..+
T Consensus 143 --g~---~~~~VGhPl~d~~~~~-------~~~--~~-~~~~I~llPGSR~~Ei-~~llP~~~~aa~~L~--~~~~-~~~ 203 (347)
T PRK14089 143 --QS---KATYVGHPLLDEIKEF-------KKD--LD-KEGTIAFMPGSRKSEI-KRLMPIFKELAKKLE--GKEK-ILV 203 (347)
T ss_pred --CC---CCEEECCcHHHhhhhh-------hhh--cC-CCCEEEEECCCCHHHH-HHHHHHHHHHHHHHh--hcCc-EEE
Confidence 44 4679999987653211 111 22 2378889999877433 255553333332211 1223 344
Q ss_pred EecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh
Q 036427 391 ICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE 468 (536)
Q Consensus 391 i~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~ 468 (536)
+.+... .+.+.+.+. ..+.+. ++..++|+.||++++.||..|+ |++.+|+|.|+.-.....+..+++.++.
T Consensus 204 i~~a~~~~~i~~~~~~~---~~~~~~---~~~~~~m~~aDlal~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~ 276 (347)
T PRK14089 204 VPSFFKGKDLKEIYGDI---SEFEIS---YDTHKALLEAEFAFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVK 276 (347)
T ss_pred EeCCCcHHHHHHHHhcC---CCcEEe---ccHHHHHHhhhHHHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHc
Confidence 445442 222323221 234444 3668899999999999997776 9999999999966555555556776662
Q ss_pred C---Cc-----------eee---cC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 469 N---GC-----------GKF---SK---SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 469 ~---g~-----------g~~---~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
- |. .++ +. +++.|++.+.+. +.+...++....++...+.+.+++++.+.+
T Consensus 277 ~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~~---~~~~~~~~~~~l~~~l~~~a~~~~A~~i~~ 346 (347)
T PRK14089 277 LKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKEM---DREKFFKKSKELREYLKHGSAKNVAKILKE 346 (347)
T ss_pred CCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence 1 11 111 11 688999888772 344455555556665566888888887765
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-14 Score=133.83 Aligned_cols=148 Identities=28% Similarity=0.448 Sum_probs=104.8
Q ss_pred EEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEE
Q 036427 353 VLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCII 431 (536)
Q Consensus 353 il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V 431 (536)
|+++||+.+...+.+.+..+.+.+... ..+.++++++|... ..+...+. ....+|.+.+|.++|.++|+.||++|
T Consensus 2 ilv~gGs~g~~~l~~~v~~~~~~~~~~---~~~~~viv~~G~~~-~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvI 77 (167)
T PF04101_consen 2 ILVTGGSQGARDLNRLVLKILELLAEK---HKNIQVIVQTGKNN-YEELKIKVENFNPNVKVFGFVDNMAELMAAADLVI 77 (167)
T ss_dssp EEEEETTTSHHHHHCCCCCHHHHHHHH---HHHCCCCCCCTTCE-CHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhhc---CCCcEEEEEECCCc-HHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEE
Confidence 678999888665555444444433210 02356788889874 22221111 22268999999999999999999999
Q ss_pred ECCChHHHHHHHHhCCcEEEeccCC---ccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 036427 432 TKAGPGTIAEAMIRGLPIILNDFIA---GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNAL 504 (536)
Q Consensus 432 ~~sG~~tllEAma~GlPVI~~~~~~---~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~ 504 (536)
+++|++|+.|++++|+|.|++|... +++..|+..+.+.|.+..+. +++.|.+.|..+++ ++..+..|..++.
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~-~~~~~~~~~~~~~ 156 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLS-DPEKLKEMAKAAA 156 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCC-CHH-SHHHCCCHH
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHc-CcHHHHHHHHHHH
Confidence 9999999999999999999999876 35666999999999988764 47789999999999 8887777766553
Q ss_pred H
Q 036427 505 K 505 (536)
Q Consensus 505 ~ 505 (536)
.
T Consensus 157 ~ 157 (167)
T PF04101_consen 157 A 157 (167)
T ss_dssp H
T ss_pred H
Confidence 3
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.6e-11 Score=134.56 Aligned_cols=265 Identities=12% Similarity=0.162 Sum_probs=171.2
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.+|..-+..+|..+-+ .+ ++.++..+.|- +.. +.+ ..+ .-.+|.|-..+....+.+.
T Consensus 143 ~~~~~~d~vWvhDYhL~llp~~lR~-~~--~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl 219 (797)
T PLN03063 143 ENYEEGDVVWCHDYHLMFLPQYLKE-YN--NKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFL 219 (797)
T ss_pred HhcCCCCEEEEecchhhhHHHHHHH-hC--CCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHH
Confidence 33445 6888887766666655433 33 23565555442 221 111 111 2357888888888777765
Q ss_pred H-----hCCC-----------CCCEEEeCCCCCCCCCCCCCc----hH---HHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 311 K-----AGLQ-----------ASQIKVYGLPVRPSFVKPVRP----KV---ELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 311 ~-----~g~~-----------~~ki~vignpv~~~~~~~~~~----~~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
. .+.. ..++.++++++++..+.+... ++ .+++.+ .++++|+.+|+....|++..
T Consensus 220 ~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~lIl~VgRLd~~KGi~~ 296 (797)
T PLN03063 220 SACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF---AGRKVILGVDRLDMIKGIPQ 296 (797)
T ss_pred HHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc---CCCeEEEEecccccccCHHH
Confidence 4 1322 135779999999876543211 11 233333 35678888998888899988
Q ss_pred HHHHHHHHhhhcccCCCCcE----EEEEec----CCH---HHHHHHHcCC--CC--------CCEEEec-Ch--hhHHHH
Q 036427 368 TARALGNALYDENLGEPIGQ----VLVICG----RNK---KLANKLLSTD--WK--------IPVQVKG-FV--SKMEEA 423 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~----~lvi~G----~~~---~l~~~l~~~~--~~--------~~V~~~G-~v--~~l~~l 423 (536)
.++++...+. .+|+++ ++.+++ .++ +++++++++. +. ..|++++ .+ +++.++
T Consensus 297 lL~Afe~lL~----~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~al 372 (797)
T PLN03063 297 KYLAFEKFLE----ENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCAL 372 (797)
T ss_pred HHHHHHHHHH----hCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHH
Confidence 8888876654 245542 233333 222 2333443331 11 1233333 33 589999
Q ss_pred HhhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 424 MGACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 424 l~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
|+.||++|++| | +++++|||+||+| +|++...+..+ .. ...+.+++ |+++++++|.+++++++
T Consensus 373 y~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~------~l-~~~allVnP~D~~~lA~AI~~aL~m~~ 445 (797)
T PLN03063 373 YAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ------SL-GAGALLVNPWNITEVSSAIKEALNMSD 445 (797)
T ss_pred HHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh------hh-cCCeEEECCCCHHHHHHHHHHHHhCCH
Confidence 99999999998 6 8999999999999 88877644333 22 22456664 99999999999999888
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++++...++.++++..+.+.+.++.+++.++
T Consensus 446 ~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 446 EERETRHRHNFQYVKTHSAQKWADDFMSELN 476 (797)
T ss_pred HHHHHHHHHHHHhhhhCCHHHHHHHHHHHHH
Confidence 8999999999999999999998888766543
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.3e-10 Score=110.39 Aligned_cols=366 Identities=15% Similarity=0.116 Sum_probs=212.5
Q ss_pred CCCCceEEEEe--CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-CcchhHHHHHHhhccccc--e-ee
Q 036427 141 NDQPKKVLILM--SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLPRSYNFLVKHGPLWK--M-TY 214 (536)
Q Consensus 141 ~~~~mKIL~~~--~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~~~y~~~~~~~~l~~--~-~~ 214 (536)
....+.+.|.. .+.|||.++......+.+.+++++. ..++.+..-+..+... ......+........+.. . ..
T Consensus 40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~-~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R 118 (465)
T KOG1387|consen 40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNN-VIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLR 118 (465)
T ss_pred hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCc-eEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEee
Confidence 34446788876 4678999999999999999998853 4444443222111000 000000000001111100 0 00
Q ss_pred cC-CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec------CCCC--
Q 036427 215 YG-TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT------DLST-- 285 (536)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~------d~~~-- 285 (536)
+. ......+-....+....+...+ +.+-++.||+.|-+..+....|++. +.++ +|++++.| |.-.
T Consensus 119 ~lVea~~~~hfTllgQaigsmIl~~-Eai~r~~Pdi~IDtMGY~fs~p~~r-~l~~----~~V~aYvHYP~iS~DML~~l 192 (465)
T KOG1387|consen 119 YLVEASTWKHFTLLGQAIGSMILAF-EAIIRFPPDIFIDTMGYPFSYPIFR-RLRR----IPVVAYVHYPTISTDMLKKL 192 (465)
T ss_pred eeeecccccceehHHHHHHHHHHHH-HHHHhCCchheEecCCCcchhHHHH-HHcc----CceEEEEecccccHHHHHHH
Confidence 11 1111222222222222222333 3455689999998776655555532 2333 88876655 1100
Q ss_pred --------------cc-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHc
Q 036427 286 --------------CH-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRREL 344 (536)
Q Consensus 286 --------------~~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~l 344 (536)
.+ ..|.-..+|.+++.|..+.+..... +...++.++++|.+.+ ++.+..
T Consensus 193 ~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qi-W~~~~~~iVyPPC~~e---------~lks~~ 262 (465)
T KOG1387|consen 193 FQRQKSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQI-WQSNTCSIVYPPCSTE---------DLKSKF 262 (465)
T ss_pred HhhhhcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHH-hhccceeEEcCCCCHH---------HHHHHh
Confidence 00 1223457788999999888776552 2336678888887654 333333
Q ss_pred CC-CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc--CCCCcEEEEEecCC-H-------HHHHHHHcCCCCCCEEE
Q 036427 345 GM-DEDLPAVLLMGGGEGMGPIEATARALGNALYDENL--GEPIGQVLVICGRN-K-------KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 345 gi-~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~--~~~~~~~lvi~G~~-~-------~l~~~l~~~~~~~~V~~ 413 (536)
+- .++.+.++.+|.....|+.. .++..+--+..+.+ .-+++.++++++.. + .+++...++.+..+|+|
T Consensus 263 ~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 33 24456777887777766644 33333222221111 11445655554332 2 13334445678888998
Q ss_pred ecCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHH
Q 036427 414 KGFV--SKMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQ 487 (536)
Q Consensus 414 ~G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ 487 (536)
.-.+ +++..+|..|.+.|..= .|..+.|+||+|+-.|+-+.++..-+ ....-.....|++..+.++.++++.+
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lD-IV~~~~G~~tGFla~t~~EYaE~iLk 420 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLD-IVTPWDGETTGFLAPTDEEYAEAILK 420 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCcee-eeeccCCccceeecCChHHHHHHHHH
Confidence 7665 58999999999988753 47899999999999998887653222 11111122346677899999999999
Q ss_pred HhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 488 WFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 488 ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++.++++.|..|+++||....+++-.+..+.+.+.++.
T Consensus 421 Iv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 421 IVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 99988888999999999988888888877777766554
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.1e-11 Score=124.01 Aligned_cols=225 Identities=15% Similarity=0.047 Sum_probs=137.6
Q ss_pred ccCCEEEEcCHHHHHHHHHh--CCCCCCEEEeCCCCCCCCCCCC------CchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 293 KLVTRCYCPTADVAKRAMKA--GLQASQIKVYGLPVRPSFVKPV------RPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~--g~~~~ki~vignpv~~~~~~~~------~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
...+.+++.+...+..+.+. .+...++.+++..++.+.+.+. ..+...|.+.+......++.-+-+....++
T Consensus 208 ~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd 287 (495)
T KOG0853|consen 208 GLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKD 287 (495)
T ss_pred hccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCC
Confidence 45678899999988887764 3344557788888876655431 111222233344332333333333333344
Q ss_pred HHHHHHHHHHHhhhcc-cCCCCcEEEEEecCC-------H------HHHHHHHcCCC-CCCEEEecChhhHHHHHhhcCe
Q 036427 365 IEATARALGNALYDEN-LGEPIGQVLVICGRN-------K------KLANKLLSTDW-KIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~-~~~~~~~~lvi~G~~-------~------~l~~~l~~~~~-~~~V~~~G~v~~l~~ll~~aDv 429 (536)
..-.+.++........ ...+..+ ++++|+. + ++.+.++++++ ...+.|+....+...+...+|+
T Consensus 288 ~~l~l~a~~~~~~~i~~~~~~~~h-l~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt 366 (495)
T KOG0853|consen 288 QDLALPAFTLLHDSIPEPSISSEH-LVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADT 366 (495)
T ss_pred ceeehhhHHhhhcccCCCCCCceE-EEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhc
Confidence 3333333332221100 0112333 4445521 1 34455566666 4667776766544445555553
Q ss_pred ---EEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHH---HHHHHHHHHhCCCHHHHHHH
Q 036427 430 ---IITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPK---EIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 430 ---~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~---~La~~I~~ll~~d~~~~~~m 499 (536)
++.|+ +|.|++|||+||+|||+++.+|.-|. +++.-.|++++ +.+ .+++++.++.. ||+++.+|
T Consensus 367 ~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~Ei-----V~~~~tG~l~dp~~e~~~~~a~~~~kl~~-~p~l~~~~ 440 (495)
T KOG0853|consen 367 KGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEI-----VVHGVTGLLIDPGQEAVAELADALLKLRR-DPELWARM 440 (495)
T ss_pred ceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEE-----EEcCCcceeeCCchHHHHHHHHHHHHHhc-CHHHHHHH
Confidence 44455 48999999999999999998775553 44444566664 445 59999999999 99999999
Q ss_pred HHHHHHhcCC-chHHHHHHHHHHHHh
Q 036427 500 SQNALKLARP-DAVFRIVQDLHELVR 524 (536)
Q Consensus 500 ~~~a~~~a~~-~~~~~i~~~i~~l~~ 524 (536)
++++++...+ +++....+.|.+.+.
T Consensus 441 ~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 441 GKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 9999998877 788777777777665
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.1e-09 Score=110.63 Aligned_cols=180 Identities=14% Similarity=0.083 Sum_probs=126.0
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-. .+.+.+++..+.. .+..++++..... .+.+.+.+.-....
T Consensus 267 ~~~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gl~~-----s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG 340 (472)
T PLN02670 267 RIKEWLDKQRVNSVVYVALGTEASLR-REEVTELALGLEK-----SETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRG 340 (472)
T ss_pred HHHHHHhcCCCCceEEEEecccccCC-HHHHHHHHHHHHH-----CCCCEEEEEcCCcccccchhhcCChHHHHhccCCC
Confidence 45555544444568888888765322 3455666666642 2335666654311 01111111111224
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--------CHHH
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--------SPKE 480 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--------d~~~ 480 (536)
+.+.+|+++ .++|++.++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++.|+|..+. +.++
T Consensus 341 ~vv~~W~PQ-~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~-Na~~v~~~g~Gv~l~~~~~~~~~~~e~ 418 (472)
T PLN02670 341 MIHVGWVPQ-VKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGL-NTRLLHGKKLGLEVPRDERDGSFTSDS 418 (472)
T ss_pred eEEeCcCCH-HHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHH-HHHHHHHcCeeEEeeccccCCcCcHHH
Confidence 777899976 578877766 9999999999999999999999999988765 999998899998662 5889
Q ss_pred HHHHHHHHhCCCH---HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 481 IANMVSQWFGPKI---DELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 481 La~~I~~ll~~d~---~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
+.++|++++. ++ ++++++.+.+..+......+++++.+.+.++...
T Consensus 419 i~~av~~vm~-~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 419 VAESVRLAMV-DDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHHHhc-CcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 9999999998 65 5677777666667777888899999988887643
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.3e-09 Score=110.61 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=98.8
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v 417 (536)
++...+.-.+..++|++..|+..... .+.+..++..+. ..+..++++..... ...+.. ..++.+.+|.
T Consensus 263 ~~~~wl~~~~~~~vvyvsfGs~~~~~-~~~~~~~~~~l~-----~~~~~~lw~~~~~~~~~~~~~-----~~~~~v~~w~ 331 (459)
T PLN02448 263 DYFQWLDSQPEGSVLYVSLGSFLSVS-SAQMDEIAAGLR-----DSGVRFLWVARGEASRLKEIC-----GDMGLVVPWC 331 (459)
T ss_pred HHHHHHcCCCCCceEEEeecccccCC-HHHHHHHHHHHH-----hCCCCEEEEEcCchhhHhHhc-----cCCEEEeccC
Confidence 44455544445667888777654322 345667777765 24456666543221 122211 2467888998
Q ss_pred hhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cceeec---------CCHHHHHHHH
Q 036427 418 SKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFS---------KSPKEIANMV 485 (536)
Q Consensus 418 ~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~---------~d~~~La~~I 485 (536)
++ .++|.+.++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++. |+|.-+ -+.+++.+++
T Consensus 332 pQ-~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~-na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av 409 (459)
T PLN02448 332 DQ-LKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPL-NSKLIVEDWKIGWRVKREVGEETLVGREEIAELV 409 (459)
T ss_pred CH-HHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchh-hHHHHHHHhCceEEEecccccCCcCcHHHHHHHH
Confidence 65 578888876 9999999999999999999999999888876 88888874 666544 1678999999
Q ss_pred HHHhCCCH
Q 036427 486 SQWFGPKI 493 (536)
Q Consensus 486 ~~ll~~d~ 493 (536)
++++. ++
T Consensus 410 ~~vl~-~~ 416 (459)
T PLN02448 410 KRFMD-LE 416 (459)
T ss_pred HHHhc-CC
Confidence 99998 64
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.7e-08 Score=107.26 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=98.9
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCC
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIP 410 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~ 410 (536)
++..+.+.-.++..+|++..|+..... .+.+..++..+. ..+..++++.+... .+.+.+.+.-...+
T Consensus 273 ~~~~~wLd~~~~~svvyvsfGS~~~~~-~~~~~~~~~~l~-----~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 346 (482)
T PLN03007 273 QECLKWLDSKKPDSVIYLSFGSVASFK-NEQLFEIAAGLE-----GSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKG 346 (482)
T ss_pred hHHHHHHhcCCCCceEEEeecCCcCCC-HHHHHHHHHHHH-----HCCCCEEEEEecCCcccchhhcCCHHHHHHhccCC
Confidence 344555544445668888777754322 234445555554 23456777766421 11122222222458
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh---hCCceee--------c--
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV---ENGCGKF--------S-- 475 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv---~~g~g~~--------~-- 475 (536)
+.+.+|+++ .++|.++++ +|+++|.++++||+++|+|+|+.|..++|.. |++.++ +.|.+.- .
T Consensus 347 ~~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~~~~~~~ 424 (482)
T PLN03007 347 LIIRGWAPQ-VLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFY-NEKLVTQVLRTGVSVGAKKLVKVKGDF 424 (482)
T ss_pred EEEecCCCH-HHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhh-hHHHHHHhhcceeEeccccccccccCc
Confidence 899999976 578888876 9999999999999999999999999888876 887665 4455531 1
Q ss_pred CCHHHHHHHHHHHhCCCH
Q 036427 476 KSPKEIANMVSQWFGPKI 493 (536)
Q Consensus 476 ~d~~~La~~I~~ll~~d~ 493 (536)
-+.+++.++|++++. ++
T Consensus 425 ~~~~~l~~av~~~m~-~~ 441 (482)
T PLN03007 425 ISREKVEKAVREVIV-GE 441 (482)
T ss_pred ccHHHHHHHHHHHhc-Cc
Confidence 178999999999998 65
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-08 Score=108.57 Aligned_cols=279 Identities=16% Similarity=0.075 Sum_probs=173.7
Q ss_pred hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc------------cc------------------cccccc
Q 036427 245 YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC------------HP------------------TWFHKL 294 (536)
Q Consensus 245 ~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~------------~~------------------~~~~~~ 294 (536)
.+|||||++.--..-+|..+.........+|.+..+|.+... .+ +-....
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence 469999998744433344433321012248888766643210 00 001236
Q ss_pred CCEEEEcCHHHHHHHHH--hC--C------CCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHcCC
Q 036427 295 VTRCYCPTADVAKRAMK--AG--L------QASQIKVYGLPVRPSFVKPVRP------------------KVELRRELGM 346 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~--~g--~------~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~lgi 346 (536)
+|.+.++|+..++.+.. +| . ...++.-+-|++|.+.+.+..+ +..+.+++|+
T Consensus 209 ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 209 ADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred ccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 78899999999888762 11 1 1245566667777666544321 2346677888
Q ss_pred CC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCCCCEEE-ecChh-h
Q 036427 347 DE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWKIPVQV-KGFVS-K 419 (536)
Q Consensus 347 ~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~~~V~~-~G~v~-~ 419 (536)
+. +.|.+.++++...+|.+...+.++...+. ..+++ ++.|.++ .+.+.+..+ ....++.+ +++.+ -
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~------~~~~~-vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~l 361 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE------QGWQL-VLLGTGDPELEEALRALASRHPGRVLVVIGYDEPL 361 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHH------hCceE-EEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHH
Confidence 73 45788889888888888777777776664 23554 5567765 344433322 12224444 44444 4
Q ss_pred HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCCh-hh--HhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 420 MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNV-PY--VVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 420 l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na-~~--lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
...+++.||++++|| + |.+-++||.+|++.|+.+.++-.++-.. .. ....|.|+.+. ++++++.+|.+.+.
T Consensus 362 a~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~ 441 (487)
T COG0297 362 AHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALV 441 (487)
T ss_pred HHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHH
Confidence 466789999999999 2 7999999999999999998775553110 00 12346677663 89999998886654
Q ss_pred C--CH-HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCCcCCC
Q 036427 491 P--KI-DELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHY 532 (536)
Q Consensus 491 ~--d~-~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~~~~~~ 532 (536)
. ++ ...+.+..++.. ..++|++-++.+.++.+.-.+-|-+
T Consensus 442 ~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 442 LYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccccc
Confidence 1 33 336666666555 6788999999998888775544433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.3e-10 Score=128.16 Aligned_cols=264 Identities=12% Similarity=0.105 Sum_probs=162.7
Q ss_pred hhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--cc---ccccCCEEEEcCHHHHHHHHH
Q 036427 244 KYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TW---FHKLVTRCYCPTADVAKRAMK 311 (536)
Q Consensus 244 ~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~---~~~~~d~vi~~S~~~~~~l~~ 311 (536)
..+| |+|.+|..-+..+|..+ ++++. +.++..+.|- +.. ..+ .. -.-.+|.+-..+....+.+..
T Consensus 130 ~~~~~d~vwvhDYhl~l~p~~l-r~~~~--~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~ 206 (726)
T PRK14501 130 IARPGDVVWVHDYQLMLLPAML-RERLP--DARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLS 206 (726)
T ss_pred hcCCCCEEEEeCchhhhHHHHH-HhhCC--CCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHH
Confidence 3444 78888877665556554 44432 2454444442 221 112 00 123567777777776666543
Q ss_pred h-----CCC-----------CCCEEEeCCCCCCCCCCCCCch-------HHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 312 A-----GLQ-----------ASQIKVYGLPVRPSFVKPVRPK-------VELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 312 ~-----g~~-----------~~ki~vignpv~~~~~~~~~~~-------~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
. +.+ ..++.++++++|++.+.+.... +++++.+ +++++|+.+|+....|++...
T Consensus 207 ~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgRl~~~Kgi~~~ 283 (726)
T PRK14501 207 SVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDRLDYTKGIPRR 283 (726)
T ss_pred HHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecCcccccCHHHH
Confidence 1 221 1257788999998776432111 1233332 456788889998888999888
Q ss_pred HHHHHHHhhhcccCCCC----cEEEEEe-c--CC-H---HHHHHHHcC-----------CCCCCEEEecCh--hhHHHHH
Q 036427 369 ARALGNALYDENLGEPI----GQVLVIC-G--RN-K---KLANKLLST-----------DWKIPVQVKGFV--SKMEEAM 424 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~----~~~lvi~-G--~~-~---~l~~~l~~~-----------~~~~~V~~~G~v--~~l~~ll 424 (536)
++++...++ ..|+ +++++++ | .+ + ++++.+.++ .+.+-+.+.+++ +++.++|
T Consensus 284 l~A~~~ll~----~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly 359 (726)
T PRK14501 284 LLAFERFLE----KNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALY 359 (726)
T ss_pred HHHHHHHHH----hCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHH
Confidence 888877654 2343 4454443 2 22 2 233333322 122224456665 5999999
Q ss_pred hhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHH
Q 036427 425 GACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKID 494 (536)
Q Consensus 425 ~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~ 494 (536)
+.||+++++| | +++++|||+||+| +|++...+ .+..+. .|.+++ |+++++++|.++++++++
T Consensus 360 ~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G-----~~~~l~---~~llv~P~d~~~la~ai~~~l~~~~~ 431 (726)
T PRK14501 360 RAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAG-----AAAELA---EALLVNPNDIEGIAAAIKRALEMPEE 431 (726)
T ss_pred HhccEEEecccccccCcccceEEEEcCCCCceEEEecccc-----hhHHhC---cCeEECCCCHHHHHHHHHHHHcCCHH
Confidence 9999999998 5 8999999999663 33333222 222243 255554 999999999999985455
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 495 ELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 495 ~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.++...+++++.+..+.++++++.+++.+++
T Consensus 432 e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 432 EQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6666666788888889999999888776654
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.1e-08 Score=103.73 Aligned_cols=179 Identities=13% Similarity=0.036 Sum_probs=111.8
Q ss_pred CEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC--
Q 036427 318 QIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR-- 394 (536)
Q Consensus 318 ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~-- 394 (536)
++..+|..+...... .....++..++|.-.+...++++..|+...-...++ ..++..|. ..+..+++++-.
T Consensus 219 ~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~-~e~a~gL~-----~s~~~Flwvvr~~~ 292 (446)
T PLN00414 219 KVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQF-QEFCLGME-----LTGLPFLIAVMPPK 292 (446)
T ss_pred CeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHH-HHHHHHHH-----HcCCCeEEEEecCC
Confidence 577787654321110 011123455666655667788888887664443333 23333332 133445444321
Q ss_pred --CH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhc--CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh
Q 036427 395 --NK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGAC--DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV 467 (536)
Q Consensus 395 --~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a--Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv 467 (536)
+. .+.+.+.+.-....+.+.+|+++ .++++++ +++|+++|.++++||+.+|+|+|+.|...+|.. |++.++
T Consensus 293 ~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~-na~~~~ 370 (446)
T PLN00414 293 GSSTVQEALPEGFEERVKGRGIVWEGWVEQ-PLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVL-ITRLLT 370 (446)
T ss_pred CcccchhhCChhHHHHhcCCCeEEeccCCH-HHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHH-HHHHHH
Confidence 11 11122222111235667799876 5788777 669999999999999999999999999888876 888886
Q ss_pred -hCCceeec-------CCHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 468 -ENGCGKFS-------KSPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 468 -~~g~g~~~-------~d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
+.|+|..+ -+.+++.+++++++. ++ +..+++++++++
T Consensus 371 ~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~-~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 371 EELEVSVKVQREDSGWFSKESLRDTVKSVMD-KDSEIGNLVKRNHKK 416 (446)
T ss_pred HHhCeEEEeccccCCccCHHHHHHHHHHHhc-CChhhHHHHHHHHHH
Confidence 56888766 278899999999997 54 445555555544
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-08 Score=100.23 Aligned_cols=219 Identities=18% Similarity=0.253 Sum_probs=136.7
Q ss_pred cccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCC--CC-----CC--CCCC-----------CCC-c----hHHHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGL--PV-----RP--SFVK-----------PVR-P----KVELRRE 343 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vign--pv-----~~--~~~~-----------~~~-~----~~~~r~~ 343 (536)
.+.+.+|.-+|+++.+++++.+ +|+.+ ..++|. |. +. +.|. ... . ...+-++
T Consensus 165 ~fgk~a~~nLcVT~AMr~dL~qnWgi~r--a~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k 242 (444)
T KOG2941|consen 165 YFGKLADYNLCVTKAMREDLIQNWGINR--AKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKK 242 (444)
T ss_pred HhhcccccchhhHHHHHHHHHHhcCCce--eEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhh
Confidence 4567889999999999988877 57643 333322 21 11 0010 000 0 0111122
Q ss_pred cC-----CCCCCCEEEEecCCCCCC-cHHHHHHHHH---HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCE
Q 036427 344 LG-----MDEDLPAVLLMGGGEGMG-PIEATARALG---NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPV 411 (536)
Q Consensus 344 lg-----i~~~~~~il~~gg~~g~k-~~~~~l~al~---~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V 411 (536)
+. ..++.|.++++..++... .+..++.++. +.+.+.....|.. +.+|+|+|+ .+.+++.++.+..--
T Consensus 243 ~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 243 DASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcCCCchhHHHHHHHHHhccccee
Confidence 21 224567777777666643 3444445444 2233322333443 467889997 345566666665322
Q ss_pred EEecCh--hhHHHHHhhcCeEEEC----CC---hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc-eeecCCHHHH
Q 036427 412 QVKGFV--SKMEEAMGACDCIITK----AG---PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC-GKFSKSPKEI 481 (536)
Q Consensus 412 ~~~G~v--~~l~~ll~~aDv~V~~----sG---~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~-g~~~~d~~~L 481 (536)
....|. +|.+.+++.||+.|+- || |+.+.+...||+||++.+...-. +++++|. |.+++|.++|
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~------ELVkh~eNGlvF~Ds~eL 395 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD------ELVKHGENGLVFEDSEEL 395 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH------HHHhcCCCceEeccHHHH
Confidence 335565 6999999999997752 46 89999999999999999865433 4777665 5566899999
Q ss_pred HHHHHHHhC---CCHHHHHHHHHHHHHhc---CCchHHHHHH
Q 036427 482 ANMVSQWFG---PKIDELKAMSQNALKLA---RPDAVFRIVQ 517 (536)
Q Consensus 482 a~~I~~ll~---~d~~~~~~m~~~a~~~a---~~~~~~~i~~ 517 (536)
++.+..+++ .+.+.+.++.+++++.. .+..|++++.
T Consensus 396 a~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 396 AEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTAL 437 (444)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhhh
Confidence 999999998 25778888888887753 2245555444
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-08 Score=105.14 Aligned_cols=201 Identities=15% Similarity=0.053 Sum_probs=119.3
Q ss_pred cCCEEEEcCHHHHHH-HHHhC-CC-CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKAG-LQ-ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~g-~~-~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
.++.+++.|-+..+. +.++- -+ ..++..+|....... ......++..+.+.-.++..+|++..|+...-...++.+
T Consensus 193 ~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e 271 (442)
T PLN02208 193 SCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQE 271 (442)
T ss_pred cCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHH
Confidence 455666655444432 33221 11 136777776432211 011113455666654555678888888765433333333
Q ss_pred HHHHH-hhhcccCCCCcEEEEEecC--C--H---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHH
Q 036427 371 ALGNA-LYDENLGEPIGQVLVICGR--N--K---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIA 440 (536)
Q Consensus 371 al~~~-l~~~~~~~~~~~~lvi~G~--~--~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tll 440 (536)
.+... +. +..++++.-. + . .+.+.+.+.-...++.+.+|.++ .++|++.. ++|+++|.++++
T Consensus 272 ~~~~l~~s-------~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ-~~iL~H~~v~~FvtHcG~nS~~ 343 (442)
T PLN02208 272 LCLGMELT-------GLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQ-PLILDHPSIGCFVNHCGPGTIW 343 (442)
T ss_pred HHHHHHhC-------CCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCH-HHHhcCCccCeEEccCCchHHH
Confidence 33321 21 1223333221 1 1 11111111112357888899977 46787776 599999999999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC-------CHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK-------SPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~-------d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
||+++|+|+|+.|..++|.. |++.+++ .|.|..+. +.+++.++|+++++ ++ +..+++++++.+
T Consensus 344 Eai~~GVP~l~~P~~~DQ~~-na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~-~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 344 ESLVSDCQMVLIPFLSDQVL-FTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMD-KDSDLGKLVRSNHTK 415 (442)
T ss_pred HHHHcCCCEEecCcchhhHH-HHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Confidence 99999999999999888876 8887776 68887662 67899999999997 54 444555555443
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.3e-08 Score=103.90 Aligned_cols=156 Identities=13% Similarity=0.135 Sum_probs=106.8
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCC
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIP 410 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~ 410 (536)
++..+.+.-.++.++|++..|+...... +.+.+++..+. ..+..++++.+... .+.+.+.+.-...+
T Consensus 271 ~~~~~WLd~~~~~svVyvsfGS~~~~~~-~~~~ela~gL~-----~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 344 (477)
T PLN02863 271 DDVMTWLDTCEDHKVVYVCFGSQVVLTK-EQMEALASGLE-----KSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRG 344 (477)
T ss_pred HHHHHHHhcCCCCceEEEEeeceecCCH-HHHHHHHHHHH-----hCCCcEEEEECCCcccccchhhCCHHHHHHhccCC
Confidence 3455666555556788888887653332 33666666665 34557777776321 11111211112346
Q ss_pred EEEecChhhHHHHHhh--cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-------CCHHH
Q 036427 411 VQVKGFVSKMEEAMGA--CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-------KSPKE 480 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~--aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-------~d~~~ 480 (536)
+.+.+|+++ .++|.+ ++++|+++|.++++||+++|+|+|+.|...+|.. |+..+++ -|+|..+ .+.++
T Consensus 345 ~~v~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~v~~~~gvG~~~~~~~~~~~~~~~ 422 (477)
T PLN02863 345 LVIRGWAPQ-VAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFV-NASLLVDELKVAVRVCEGADTVPDSDE 422 (477)
T ss_pred EEecCCCCH-HHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchh-hHHHHHHhhceeEEeccCCCCCcCHHH
Confidence 888899976 567776 7789999999999999999999999999988876 8888775 4888765 16789
Q ss_pred HHHHHHHHhCCCHHHHHHHHH
Q 036427 481 IANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 481 La~~I~~ll~~d~~~~~~m~~ 501 (536)
+.+++.+++..++++++++.+
T Consensus 423 v~~~v~~~m~~~~~~r~~a~~ 443 (477)
T PLN02863 423 LARVFMESVSENQVERERAKE 443 (477)
T ss_pred HHHHHHHHhhccHHHHHHHHH
Confidence 999999988326666655443
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.4e-08 Score=103.42 Aligned_cols=162 Identities=14% Similarity=0.123 Sum_probs=109.9
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+.-.++.++|++..|+.... ..+.+.+++..+. ..+.+++++.+... +..+.+.+.....+..+.+|+
T Consensus 259 ~~~wld~~~~~svvyvsfGS~~~~-~~~~~~e~a~~l~-----~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~ 332 (456)
T PLN02210 259 CMEWLDKQARSSVVYISFGSMLES-LENQVETIAKALK-----NRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWS 332 (456)
T ss_pred HHHHHhCCCCCceEEEEecccccC-CHHHHHHHHHHHH-----hCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecC
Confidence 344444334456788877775432 2456666766665 34557777665321 111222222112345577998
Q ss_pred hhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--------CHHHHHHHHH
Q 036427 418 SKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--------SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--------d~~~La~~I~ 486 (536)
++ .++|++++ ++|+++|.++++||+.+|+|+|+.|...+|.. |++.+++ .|+|..+. +.++++++|+
T Consensus 333 PQ-~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~-na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~ 410 (456)
T PLN02210 333 PQ-EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPI-DARLLVDVFGIGVRMRNDAVDGELKVEEVERCIE 410 (456)
T ss_pred CH-HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHH-HHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHH
Confidence 76 47888887 89999999999999999999999999988875 8998987 79987662 6789999999
Q ss_pred HHhCCCHH---HH---HHHHHHHHHhcCCc
Q 036427 487 QWFGPKID---EL---KAMSQNALKLARPD 510 (536)
Q Consensus 487 ~ll~~d~~---~~---~~m~~~a~~~a~~~ 510 (536)
+++. +++ .| +++++.+++...+.
T Consensus 411 ~~m~-~~~g~~~r~~a~~l~~~a~~Av~~g 439 (456)
T PLN02210 411 AVTE-GPAAADIRRRAAELKHVARLALAPG 439 (456)
T ss_pred HHhc-CchHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 643 33 34455566555553
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-08 Score=105.61 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=106.3
Q ss_pred HHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhh
Q 036427 342 RELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSK 419 (536)
Q Consensus 342 ~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~ 419 (536)
+.+.-.+...+|++..|+....-..+.+..++..+.. .+..+|++...+. .+.+...+ ...+++.+.+|+++
T Consensus 265 ~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~-----~g~~fiW~~~~~~~~~l~~~~~~-~~~~~~~v~~w~PQ 338 (448)
T PLN02562 265 GWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEA-----SGRPFIWVLNPVWREGLPPGYVE-RVSKQGKVVSWAPQ 338 (448)
T ss_pred HHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHH-----CCCCEEEEEcCCchhhCCHHHHH-HhccCEEEEecCCH
Confidence 4443333345777777775422234556666666652 2346666654321 12111111 12357888899975
Q ss_pred HHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHHhCCCHH
Q 036427 420 MEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQWFGPKID 494 (536)
Q Consensus 420 l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~ll~~d~~ 494 (536)
.++|++++ ++|+++|.++++||+.+|+|+|+.|..++|.. |++.+++ .|+|.-+. +.++++++|++++. +++
T Consensus 339 -~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~-~~~ 415 (448)
T PLN02562 339 -LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFV-NCAYIVDVWKIGVRISGFGQKEVEEGLRKVME-DSG 415 (448)
T ss_pred -HHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHH-HHHHHHHHhCceeEeCCCCHHHHHHHHHHHhC-CHH
Confidence 57888866 69999999999999999999999999998876 8888876 47777664 78999999999999 888
Q ss_pred HHHHHHHHHHH
Q 036427 495 ELKAMSQNALK 505 (536)
Q Consensus 495 ~~~~m~~~a~~ 505 (536)
++++..+.+.+
T Consensus 416 ~r~~a~~l~~~ 426 (448)
T PLN02562 416 MGERLMKLRER 426 (448)
T ss_pred HHHHHHHHHHH
Confidence 88776654444
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.9e-08 Score=103.83 Aligned_cols=204 Identities=18% Similarity=0.187 Sum_probs=124.9
Q ss_pred CEEEeCCCCCCC-CCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH
Q 036427 318 QIKVYGLPVRPS-FVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK 396 (536)
Q Consensus 318 ki~vignpv~~~-~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~ 396 (536)
++..+|.-.... ........++..+.+.-.+...+|++..|+.......+ +.+++..+. ..+..++++.....
T Consensus 239 ~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q-~~ela~gL~-----~s~~~flWv~~~~~ 312 (480)
T PLN00164 239 TVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQ-VREIAAGLE-----RSGHRFLWVLRGPP 312 (480)
T ss_pred ceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHH-HHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 577777654211 11111123445566544445567888888765444333 666666665 23446666654211
Q ss_pred ----------H----HHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 397 ----------K----LANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 397 ----------~----l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
+ +.+.+.+.-....+.+.+|.++ .++|.+++ ++|+++|.++++||+++|+|+|+.|..++|..
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ-~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 391 (480)
T PLN00164 313 AAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQ-KEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHL 391 (480)
T ss_pred ccccccccccchhhhCChHHHHHhcCCCeEEeecCCH-HHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchh
Confidence 0 1111111111234777789876 57888877 69999999999999999999999999998876
Q ss_pred CChhhHhh-CCceeecC---------CHHHHHHHHHHHhCCCHH-HHHHHHHHH-------HHhcCC-chHHHHHHHHHH
Q 036427 461 GNVPYVVE-NGCGKFSK---------SPKEIANMVSQWFGPKID-ELKAMSQNA-------LKLARP-DAVFRIVQDLHE 521 (536)
Q Consensus 461 ~na~~lv~-~g~g~~~~---------d~~~La~~I~~ll~~d~~-~~~~m~~~a-------~~~a~~-~~~~~i~~~i~~ 521 (536)
|+..+++ .|+|..+. +.+++.++|++++. +++ ..++|++++ ++...+ .++.+..+.+.+
T Consensus 392 -Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~-~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~ 469 (480)
T PLN00164 392 -NAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMG-GGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAR 469 (480)
T ss_pred -HHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 8887765 68887652 57899999999997 543 233444433 333333 345565666655
Q ss_pred HHhhcCCcC
Q 036427 522 LVRQRNFVP 530 (536)
Q Consensus 522 l~~~~~~~~ 530 (536)
-+..+..-|
T Consensus 470 ~~~~~~~~~ 478 (480)
T PLN00164 470 EIRHGAVAP 478 (480)
T ss_pred HHHhccCCC
Confidence 555554433
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.5e-08 Score=95.57 Aligned_cols=308 Identities=16% Similarity=0.105 Sum_probs=178.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||=..+. -|+.....+...|.++ |++|.++....+... .+-..|.+. +..+..... ....
T Consensus 1 mkVwiDI~n~--~hvhfFk~lI~elekk---G~ev~iT~rd~~~v~----~LLd~ygf~------~~~Igk~g~-~tl~- 63 (346)
T COG1817 1 MKVWIDIGNP--PHVHFFKNLIWELEKK---GHEVLITCRDFGVVT----ELLDLYGFP------YKSIGKHGG-VTLK- 63 (346)
T ss_pred CeEEEEcCCc--chhhHHHHHHHHHHhC---CeEEEEEEeecCcHH----HHHHHhCCC------eEeecccCC-ccHH-
Confidence 7899988776 8999999999999999 999988865332110 011111100 000000000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEec-CCCCcccccccccCCEEEEcC
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~~~~~~~~d~vi~~S 302 (536)
-+...+......|.+++.+++||+.+.-+ +.+.+ .+.-.| +|.+.+.. .......+...++++.++++.
T Consensus 64 -~Kl~~~~eR~~~L~ki~~~~kpdv~i~~~s~~l~r----vafgLg----~psIi~~D~ehA~~qnkl~~Pla~~ii~P~ 134 (346)
T COG1817 64 -EKLLESAERVYKLSKIIAEFKPDVAIGKHSPELPR----VAFGLG----IPSIIFVDNEHAEAQNKLTLPLADVIITPE 134 (346)
T ss_pred -HHHHHHHHHHHHHHHHHhhcCCceEeecCCcchhh----HHhhcC----CceEEecCChhHHHHhhcchhhhhheeccc
Confidence 01112334456888899999999999844 33322 233334 67665443 222123456778999999998
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCC-CCCCchHHHHHHcCCCCCCCEEEEecCCCCC-----CcHHHHHHHHHHHh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFV-KPVRPKVELRRELGMDEDLPAVLLMGGGEGM-----GPIEATARALGNAL 376 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~-~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-----k~~~~~l~al~~~l 376 (536)
......++..|..+.++. -++++..-.. ..-.+.+++.+++|+.++.+.|++=.-+++. +.-......+.+.+
T Consensus 135 ~~~~~~~~~~G~~p~~i~-~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l 213 (346)
T COG1817 135 AIDEEELLDFGADPNKIS-GYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKEL 213 (346)
T ss_pred ccchHHHHHhCCCcccee-cccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHH
Confidence 888888888887776653 2333322111 1123467889999999987777653333221 11123455555655
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
++ .-+ ++.-...++++.++... +++..-..-|--+++--|+++|..+| ...-||+..|+|+|.+..+.
T Consensus 214 ~k-------~gi-V~ipr~~~~~eife~~~---n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~pGk 281 (346)
T COG1817 214 KK-------YGI-VLIPREKEQAEIFEGYR---NIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCYPGK 281 (346)
T ss_pred Hh-------CcE-EEecCchhHHHHHhhhc---cccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEecCCc
Confidence 42 123 33344444455554432 33322223344568889999997655 44579999999999988431
Q ss_pred ccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHH
Q 036427 457 GQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKID 494 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~ 494 (536)
-...-+++++.|.-.-..|+.++.+.+.+++. ++.
T Consensus 282 --ll~vdk~lie~G~~~~s~~~~~~~~~a~~~l~-~~~ 316 (346)
T COG1817 282 --LLAVDKYLIEKGLLYHSTDEIAIVEYAVRNLK-YRR 316 (346)
T ss_pred --cccccHHHHhcCceeecCCHHHHHHHHHHHhh-chh
Confidence 22234557777755444477777777777776 543
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-07 Score=99.88 Aligned_cols=143 Identities=17% Similarity=0.142 Sum_probs=98.0
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+.-.++..+|++..|+...-. .+.+.+++..+. +..++++.-... .+.+.+.+.-...++.+.+|.
T Consensus 254 c~~WLd~~~~~svvyvsfGS~~~~~-~~~~~ela~gLs-------~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~ 325 (449)
T PLN02173 254 CTDWLDKRPQGSVVYIAFGSMAKLS-SEQMEEIASAIS-------NFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWS 325 (449)
T ss_pred HHHHHhcCCCCceEEEEecccccCC-HHHHHHHHHHhc-------CCCEEEEEeccchhcccchHHHhhcCCceEEeCCC
Confidence 4455544455668888888755322 344555665553 123555553211 111111111114578889999
Q ss_pred hhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--------CHHHHHHHHH
Q 036427 418 SKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--------SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--------d~~~La~~I~ 486 (536)
++ .++|++.+ ++|+++|.++++||+++|+|+|+.|...+|.. |+..+++. |+|.-+. +.+++.++++
T Consensus 326 PQ-~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~-Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~ 403 (449)
T PLN02173 326 PQ-LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPM-NAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIK 403 (449)
T ss_pred CH-HHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchH-HHHHHHHHhCceEEEeecccCCcccHHHHHHHHH
Confidence 86 56888877 89999999999999999999999999888875 99999875 7776542 6799999999
Q ss_pred HHhCCCH
Q 036427 487 QWFGPKI 493 (536)
Q Consensus 487 ~ll~~d~ 493 (536)
+++. ++
T Consensus 404 ~vm~-~~ 409 (449)
T PLN02173 404 EVME-GE 409 (449)
T ss_pred HHhc-CC
Confidence 9997 54
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.4e-08 Score=103.83 Aligned_cols=264 Identities=12% Similarity=0.084 Sum_probs=170.4
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.++..-+..+|..+ ++++. +.++-.+.| -+.. +.| ..+ .-.+|.|=..+....+.++
T Consensus 128 ~~~~~~d~vWVhDYhL~llp~~L-R~~~~--~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl 204 (487)
T TIGR02398 128 LEAAEGATVWVHDYNLWLVPGYI-RQLRP--DLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFV 204 (487)
T ss_pred HhcCCCCEEEEecchhhHHHHHH-HHhCC--CCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHH
Confidence 34455 68888776555555544 44432 244444444 2221 111 111 1256777777777777655
Q ss_pred Hh-----CCCC-----------------------------C---CEEEeCCCCCCCCCCCCC-------chHHHHHHcCC
Q 036427 311 KA-----GLQA-----------------------------S---QIKVYGLPVRPSFVKPVR-------PKVELRRELGM 346 (536)
Q Consensus 311 ~~-----g~~~-----------------------------~---ki~vignpv~~~~~~~~~-------~~~~~r~~lgi 346 (536)
.. |+.. . ++.++|.++|++.+.... ..+++|++++
T Consensus 205 ~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~- 283 (487)
T TIGR02398 205 DAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELA- 283 (487)
T ss_pred HHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC-
Confidence 41 2210 1 256788888887653221 1234677776
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCC----H---HHHHHHHc-----------
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRN----K---KLANKLLS----------- 404 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~----~---~l~~~l~~----------- 404 (536)
++++|+.+++....|++...++++.+.+. .+|+ +.++.++... + ++++++++
T Consensus 284 --~~kiIl~VDRLDy~KGI~~kl~Afe~~L~----~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~ 357 (487)
T TIGR02398 284 --GVKLILSAERVDYTKGILEKLNAYERLLE----RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFAR 357 (487)
T ss_pred --CceEEEEecccccccCHHHHHHHHHHHHH----hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCC
Confidence 56788888888888999888888877665 3454 3444443321 1 23333433
Q ss_pred CCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceee
Q 036427 405 TDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 405 ~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~ 474 (536)
.++.+-+.+.+.+ +++..+|+.||+++.+| | .++..|+++|+. |+|++...+.. ..+ ..+.+
T Consensus 358 ~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa-----~~l---~~All 429 (487)
T TIGR02398 358 IGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAA-----VEL---KGALL 429 (487)
T ss_pred CCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccch-----hhc---CCCEE
Confidence 1344556777776 58999999999999998 5 789999999998 99998754422 112 23556
Q ss_pred cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 475 SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 475 ~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++ |+++++++|.+.|+|.++.|++-.+.-++....+...+.++..++-++
T Consensus 430 VNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 430 TNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 65 999999999999997777777777777788888888888887776554
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.9e-08 Score=100.91 Aligned_cols=211 Identities=21% Similarity=0.253 Sum_probs=143.8
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCC--CEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDL--PAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~--~~il~~gg~~g~k~~~~~l~a 371 (536)
..+.++..+............. .++.+++++++...+... ...+..+. ..++++|+....++....+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~ 220 (381)
T COG0438 150 LADRVIAVSPALKELLEALGVP-NKIVVIPNGIDTEKFAPA--------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEA 220 (381)
T ss_pred cccEEEECCHHHHHHHHHhCCC-CCceEecCCcCHHHcCcc--------ccCCCcccCceEEEEeeccChhcCHHHHHHH
Confidence 3677788888775555554433 367788888887755431 11222333 577788886555777776666
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
+..... ..++..+ ++.|.+. .+.+.+.+.....++.+.|+++ ++..+++.||++++|+ + +.+++|
T Consensus 221 ~~~~~~----~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~E 295 (381)
T COG0438 221 AAKLKK----RGPDIKL-VIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLE 295 (381)
T ss_pred HHHhhh----hcCCeEE-EEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHH
Confidence 654432 1122444 4455553 2444555555567899999986 7888899999999995 3 788999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
||++|+|||+++.++..+ ++..+ .|.++. +.+++++++..+++ +++.++.+.+.+++.. ..+.++++++
T Consensus 296 a~a~g~pvi~~~~~~~~e------~~~~~~~g~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (381)
T COG0438 296 AMAAGTPVIASDVGGIPE------VVEDGETGLLVPPGDVEELADALEQLLE-DPELREELGEAARERVEEEFSWERIAE 368 (381)
T ss_pred HHhcCCcEEECCCCChHH------HhcCCCceEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999764444 34333 355443 58999999999999 8877888887554443 5789999988
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++..
T Consensus 369 ~~~~~~~~ 376 (381)
T COG0438 369 QLLELYEE 376 (381)
T ss_pred HHHHHHHH
Confidence 87776654
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-07 Score=98.05 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=117.1
Q ss_pred cCCEEEEcCHHHHHH-HHHhC--CCCCCEEEeCCCCCC-CCCCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKAG--LQASQIKVYGLPVRP-SFVKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~g--~~~~ki~vignpv~~-~~~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
.++.+++.|-+..+. +.++- ....++..+|..... ..-.. .....+..+.+.-.+...+|++..|+...-. .+-
T Consensus 203 ~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~-~~q 281 (451)
T PLN02410 203 TASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALME-INE 281 (451)
T ss_pred cCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCC-HHH
Confidence 456666655544432 22211 011357777754311 10000 1111223344444445678888888765333 334
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCC----HH----HHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChHH
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRN----KK----LANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPGT 438 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~----~~----l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~t 438 (536)
+..++..+. ..+..++++...+ .+ +.+.+.+. ...+..+.+|+++ .++|++.++ +|+++|.++
T Consensus 282 ~~ela~gLe-----~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er-~~~~g~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS 354 (451)
T PLN02410 282 VMETASGLD-----SSNQQFLWVIRPGSVRGSEWIESLPKEFSKI-ISGRGYIVKWAPQ-KEVLSHPAVGGFWSHCGWNS 354 (451)
T ss_pred HHHHHHHHH-----hcCCCeEEEEccCcccccchhhcCChhHHHh-ccCCeEEEccCCH-HHHhCCCccCeeeecCchhH
Confidence 555666664 2334577765522 11 11121111 2356788899976 568888555 999999999
Q ss_pred HHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC---CHHHHHHHHHHHhCCCH
Q 036427 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK---SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 439 llEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~---d~~~La~~I~~ll~~d~ 493 (536)
++||+++|+|+|+.|...+|.. |++.+++. |.|..+. +.++++++|++++. ++
T Consensus 355 ~~Ea~~~GvP~l~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~-~~ 411 (451)
T PLN02410 355 TLESIGEGVPMICKPFSSDQKV-NARYLECVWKIGIQVEGDLDRGAVERAVKRLMV-EE 411 (451)
T ss_pred HHHHHHcCCCEEeccccccCHH-HHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHc-CC
Confidence 9999999999999999888765 88988876 8887663 88999999999998 65
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.1e-07 Score=98.32 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=121.5
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC---
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--- 394 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--- 394 (536)
++..+|.-+.+.. .....++..+.+.-.+...+|++..|+...-. .+-+.+++..+.. .+..+|++...
T Consensus 233 ~v~~VGPl~~~~~--~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gL~~-----s~~~flW~~r~~~~ 304 (481)
T PLN02992 233 PVYPIGPLCRPIQ--SSKTDHPVLDWLNKQPNESVLYISFGSGGSLS-AKQLTELAWGLEM-----SQQRFVWVVRPPVD 304 (481)
T ss_pred ceEEecCccCCcC--CCcchHHHHHHHHcCCCCceEEEeecccccCC-HHHHHHHHHHHHH-----cCCCEEEEEeCCcc
Confidence 4777776543221 11112334455543344568888778764322 3345555555542 23456666621
Q ss_pred C---------------H----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEec
Q 036427 395 N---------------K----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILND 453 (536)
Q Consensus 395 ~---------------~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~ 453 (536)
+ + .+.+.+.+.-...++.+.+|+++ .+++.+..+ +|+++|.++++||+.+|+|+|+.|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ-~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P 383 (481)
T PLN02992 305 GSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQ-AEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP 383 (481)
T ss_pred cccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCH-HHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC
Confidence 0 0 01111111112346888899976 578888886 999999999999999999999999
Q ss_pred cCCccccCChhhHh-hCCceeecC------CHHHHHHHHHHHhCCCH---H---HHHHHHHHHHHhcC---Cc----hHH
Q 036427 454 FIAGQEAGNVPYVV-ENGCGKFSK------SPKEIANMVSQWFGPKI---D---ELKAMSQNALKLAR---PD----AVF 513 (536)
Q Consensus 454 ~~~~~e~~na~~lv-~~g~g~~~~------d~~~La~~I~~ll~~d~---~---~~~~m~~~a~~~a~---~~----~~~ 513 (536)
...+|.. |+..++ +.|.|..+. +.+++.++|.+++. ++ + ..+++++.+++... .. ..+
T Consensus 384 ~~~DQ~~-na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~-~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~ 461 (481)
T PLN02992 384 LFAEQNM-NAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMV-EEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLC 461 (481)
T ss_pred ccchhHH-HHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHH
Confidence 9988875 888885 788887662 67899999999997 53 2 22444455555542 22 334
Q ss_pred HHHHHHHHHHhh
Q 036427 514 RIVQDLHELVRQ 525 (536)
Q Consensus 514 ~i~~~i~~l~~~ 525 (536)
++++.+...+++
T Consensus 462 ~~v~~~~~~~~~ 473 (481)
T PLN02992 462 RVTKECQRFLER 473 (481)
T ss_pred HHHHHHHHHHHH
Confidence 455555555554
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.6e-07 Score=97.04 Aligned_cols=178 Identities=13% Similarity=0.077 Sum_probs=110.5
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC--C
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--N 395 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--~ 395 (536)
++..+|..+.... ......++..+.+.-.+...++++..|+...-...+ +..++..|. ..+..++++... +
T Consensus 226 ~v~~VGPL~~~~~-~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q-~~ela~gL~-----~s~~pflwv~r~~~~ 298 (453)
T PLN02764 226 KVLLTGPVFPEPD-KTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQ-FQELCLGME-----LTGSPFLVAVKPPRG 298 (453)
T ss_pred cEEEeccCccCcc-ccccchhHHHHHHhCCCCCceEEEeecccccCCHHH-HHHHHHHHH-----hCCCCeEEEEeCCCC
Confidence 5777876532110 011113445666665566778888888765433222 233333332 233445555432 1
Q ss_pred --H---HHHHHHHcCCCCCCEEEecChhhHHHHHhhc--CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh
Q 036427 396 --K---KLANKLLSTDWKIPVQVKGFVSKMEEAMGAC--DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE 468 (536)
Q Consensus 396 --~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a--Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~ 468 (536)
. .+.+.+.+.-....+.+.+|+++ .++++.. .++|+++|.++++||+.+|+|+|+.|...+|.. |++.+++
T Consensus 299 ~~~~~~~lp~~f~~r~~grG~v~~~W~PQ-~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~-na~~l~~ 376 (453)
T PLN02764 299 SSTIQEALPEGFEERVKGRGVVWGGWVQQ-PLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVL-NTRLLSD 376 (453)
T ss_pred CcchhhhCCcchHhhhccCCcEEeCCCCH-HHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHH-HHHHHHH
Confidence 1 11111111111335777899976 5678775 559999999999999999999999999888875 8888864
Q ss_pred -CCceeec-------CCHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 469 -NGCGKFS-------KSPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 469 -~g~g~~~-------~d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
.|+|..+ -+.+++.++++++++ ++ +..+++.+++++
T Consensus 377 ~~g~gv~~~~~~~~~~~~e~i~~av~~vm~-~~~~~g~~~r~~a~~ 421 (453)
T PLN02764 377 ELKVSVEVAREETGWFSKESLRDAINSVMK-RDSEIGNLVKKNHTK 421 (453)
T ss_pred HhceEEEeccccCCccCHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Confidence 5777654 178999999999998 64 445555555443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.1e-10 Score=99.62 Aligned_cols=126 Identities=25% Similarity=0.404 Sum_probs=77.5
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeE
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCI 430 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~ 430 (536)
.+++++|+....+.+..+++++.+.+.+ ..|++.+.+ .|.+++ +++++ ..++|++.|+++++.++|+.||++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~---~~p~~~l~i-~G~~~~---~l~~~-~~~~v~~~g~~~e~~~~l~~~dv~ 74 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKE---KHPDIELII-IGNGPD---ELKRL-RRPNVRFHGFVEELPEILAAADVG 74 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHH---HSTTEEEEE-ECESS----HHCCH-HHCTEEEE-S-HHHHHHHHC-SEE
T ss_pred ccccccccccccccccchhhhHHHHHHH---HCcCEEEEE-EeCCHH---HHHHh-cCCCEEEcCCHHHHHHHHHhCCEE
Confidence 4566666666667777777733344432 246777644 565543 13332 245999999999999999999999
Q ss_pred EECC----C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 431 ITKA----G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 431 V~~s----G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
+.|. + +++++|||++|+|+|+++. +.. ......+.+.++ +|+++++++|.++++
T Consensus 75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-----~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 75 LIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAE-----GIVEEDGCGVLVANDPEELAEAIERLLN 134 (135)
T ss_dssp EE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCH-----CHS---SEEEE-TT-HHHHHHHHHHHHH
T ss_pred EEEeeCCCcCcHHHHHHHHhCCCEEECCc-chh-----hheeecCCeEEECCCHHHHHHHHHHHhc
Confidence 9985 3 7999999999999999986 211 123345666655 589999999999986
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.03 E-value=9e-09 Score=111.33 Aligned_cols=202 Identities=14% Similarity=0.110 Sum_probs=140.4
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCC---CCEEEeCCCCCCCCCCCCCchHHHHHHcCCC-CCCCEEEEec--CCCCCCcHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQA---SQIKVYGLPVRPSFVKPVRPKVELRRELGMD-EDLPAVLLMG--GGEGMGPIE 366 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~---~ki~vignpv~~~~~~~~~~~~~~r~~lgi~-~~~~~il~~g--g~~g~k~~~ 366 (536)
..+|.+++.++...+.+.+..-.. .++..++.. +.... ++.. .....+++++ +. ..+.+.
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~-~~~~~------------~~~s~r~~~~~I~v~idrL-~ek~~~ 336 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEENYRENYVEFDISRITPF-DTRLR------------LGQSQQLYETEIGFWIDGL-SDEELQ 336 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCcc-ceEEe------------cChhhcccceEEEEEcCCC-ChHHHH
Confidence 456778888877666665431111 223334321 11111 1111 1122455566 66 778888
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH------HHHHHHHcCCCC-----------------------------CCE
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK------KLANKLLSTDWK-----------------------------IPV 411 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------~l~~~l~~~~~~-----------------------------~~V 411 (536)
.++.++.+... ..|++.+. +.|.+. .+.+.+++++.. .+|
T Consensus 337 ~~I~av~~~~~----~~p~~~L~-~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 411 (519)
T TIGR03713 337 QILQQLLQYIL----KNPDYELK-ILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERI 411 (519)
T ss_pred HHHHHHHHHHh----hCCCeEEE-EEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEE
Confidence 88998888776 36887753 344332 222333333222 689
Q ss_pred EEecChh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHH
Q 036427 412 QVKGFVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVS 486 (536)
Q Consensus 412 ~~~G~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~ 486 (536)
+|.|+.. ++.+.|..+.++|..| |-.+.+||++.|+|+| +. +....+.+...|.++.|..+|+++|.
T Consensus 412 ~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny------g~~~~V~d~~NG~li~d~~~l~~al~ 483 (519)
T TIGR03713 412 AFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK------VETDYVEHNKNGYIIDDISELLKALD 483 (519)
T ss_pred EEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec------CCceeeEcCCCcEEeCCHHHHHHHHH
Confidence 9999987 9999999999999987 5239999999999999 22 22333566667888899999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 487 QWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 487 ~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
.+|+ +++.+.++...+.+.+.+++.+.+++.|.++
T Consensus 484 ~~L~-~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 484 YYLD-NLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999 9999999999999999999999999999875
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=6e-09 Score=95.56 Aligned_cols=157 Identities=18% Similarity=0.133 Sum_probs=88.0
Q ss_pred EEEEe--CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 147 VLILM--SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 147 IL~~~--~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|+++. ....||.++.+..|+++|.++ |++|.++......... .. ..... .... ....
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~---G~~v~v~~~~~~~~~~-~~-~~~~~---~~~~-------~~~~------ 59 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKR---GHEVTVVSPGVKDPIE-EE-LVKIF---VKIP-------YPIR------ 59 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHT---T-EEEEEESS-TTS-S-ST-EEEE------TT--------SST------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHC---CCEEEEEEcCCCccch-hh-cccee---eeee-------cccc------
Confidence 45554 223489999999999999999 8898877543322111 11 00000 0000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-----------------cc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-----------------CH 287 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-----------------~~ 287 (536)
............+.+++++.+||+||++.+..........+ ++|.+...|+... ..
T Consensus 60 -~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~ 132 (177)
T PF13439_consen 60 -KRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACR------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRI 132 (177)
T ss_dssp -SS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCT
T ss_pred -cccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhcc------CCCEEEEeCCCcccccccccccchhhhhhhhh
Confidence 00113344556888899999999998887654433222222 2788766654320 00
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCC
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFV 331 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~ 331 (536)
..++.+.+|.++++|+.+++.+.++|++++++.+++||+|.+.|
T Consensus 133 ~~~~~~~~~~ii~vS~~~~~~l~~~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 133 ERKLYKKADRIIAVSESTKDELIKFGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp THHHHCCSSEEEESSHHHHHHHHHHT--SS-EEE----B-CCCH
T ss_pred hhhHHhcCCEEEEECHHHHHHHHHhCCcccCCEEEECCccHHHc
Confidence 12345789999999999999999999999999999999998765
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-07 Score=95.86 Aligned_cols=161 Identities=14% Similarity=0.139 Sum_probs=104.4
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---------HH---H--HHHHHc
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---------KK---L--ANKLLS 404 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---------~~---l--~~~l~~ 404 (536)
+..+.+.-.+.+.+|++..|+...- ..+.+.+++..+.. .+..++++.... .. + .+.+.+
T Consensus 250 ~~~~wLd~~~~~sVvyvsfGS~~~l-~~~q~~ela~gL~~-----s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e 323 (455)
T PLN02152 250 SYTLWLDSKTESSVIYVSFGTMVEL-SKKQIEELARALIE-----GKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRH 323 (455)
T ss_pred HHHHHhhCCCCCceEEEEecccccC-CHHHHHHHHHHHHH-----cCCCeEEEEecCcccccccccccccccccchhHHH
Confidence 4556665445567888887875422 23445556666542 223566665431 00 0 011111
Q ss_pred CCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh---CCceeec----
Q 036427 405 TDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE---NGCGKFS---- 475 (536)
Q Consensus 405 ~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~---~g~g~~~---- 475 (536)
....+..+.+|+++ .++|++.+ ++|+++|.++++||+.+|+|+|+.|...+|.. |+..+++ .|.+...
T Consensus 324 -~~~~~g~v~~W~PQ-~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 324 -ELEEVGMIVSWCSQ-IEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPA-NAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred -hccCCeEEEeeCCH-HHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchH-HHHHHHHHhCceEEeecCcCC
Confidence 13457788899976 46888888 59999999999999999999999999888865 8888887 3444332
Q ss_pred -CCHHHHHHHHHHHhCCCHH--HHHH---HHHHHHHhcCC
Q 036427 476 -KSPKEIANMVSQWFGPKID--ELKA---MSQNALKLARP 509 (536)
Q Consensus 476 -~d~~~La~~I~~ll~~d~~--~~~~---m~~~a~~~a~~ 509 (536)
-+.+++.++|+++++ ++. .|++ +++.+++.+.+
T Consensus 401 ~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ 439 (455)
T PLN02152 401 LVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGE 439 (455)
T ss_pred cCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcC
Confidence 168999999999997 543 3333 34555555444
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.4e-06 Score=87.64 Aligned_cols=336 Identities=12% Similarity=0.078 Sum_probs=177.2
Q ss_pred ceEEEEeC-CCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc--chhHHHHHHhhcc------------
Q 036427 145 KKVLILMS-DTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ--LPRSYNFLVKHGP------------ 208 (536)
Q Consensus 145 mKIL~~~~-~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~--~~~~y~~~~~~~~------------ 208 (536)
|||+|... ++| .|.+.....+.+.|+++.| +.++.|.+.....+.+.... +.... ++.....
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p-~~~i~v~S~~P~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~ 78 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNP-HAEVDVMSRYPVSSSWLLNRPVMGDPL-FLQMKQHNSAAGVVGRVKK 78 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCC-CCeEEEEecCccchhhhcccccccchh-hhhhhhcccccccchhHHH
Confidence 79999853 332 5999999999999999977 58888888765543321110 00000 0000000
Q ss_pred c----c--ceeec-CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc-----c--hHH-HHHHHHcCCCCC
Q 036427 209 L----W--KMTYY-GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM-----Q--HVP-LRILRAKGLLKK 273 (536)
Q Consensus 209 l----~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~-----~--~i~-~~~~~~~g~~~~ 273 (536)
. | ..++. ...... ............+.+.++ +.|+++..+.-. . .+. +..++..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~g---- 148 (426)
T PRK10017 79 VLRRRYQHQVLLSRVTDTGK----LRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAK---- 148 (426)
T ss_pred HHHhhhhHHHHHhhhccccc----cccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcC----
Confidence 0 0 00000 000000 000000111223333344 379999876321 1 111 22344445
Q ss_pred ceEEEEecCCCCccc-------ccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHc
Q 036427 274 IVFTTVITDLSTCHP-------TWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR--PKVELRREL 344 (536)
Q Consensus 274 ip~v~~~~d~~~~~~-------~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~l 344 (536)
.|++.+......... +|+.+.+|.+.+-.+...+.+.+.|++..++.+.+-|+..-...... +...+...+
T Consensus 149 kpv~l~gqsiGPf~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpAF~L~~~~~~~~~~~~~~~~~ 228 (426)
T PRK10017 149 KPLYMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWL 228 (426)
T ss_pred CCEEEECCcCCCcCCHHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChhhhCCccccccccchhhhhhh
Confidence 687777666553322 45667899999999999999999999888888876543221100000 111122223
Q ss_pred CCCCCCCEEEEecCCCC-C--------CcHHHHHHHHHHHhhhcccCCCCcEEEEEe--------cCCH-HHHHHHHcC-
Q 036427 345 GMDEDLPAVLLMGGGEG-M--------GPIEATARALGNALYDENLGEPIGQVLVIC--------GRNK-KLANKLLST- 405 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g-~--------k~~~~~l~al~~~l~~~~~~~~~~~~lvi~--------G~~~-~l~~~l~~~- 405 (536)
+...+.+.|.+..+.+. . ....+.+..+++.+. ..+.+++++. +..+ ...+.+.+.
T Consensus 229 ~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li-----~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~ 303 (426)
T PRK10017 229 DVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRII-----DEGYQVIALSTCTGIDSYNKDDRMVALNLRQHV 303 (426)
T ss_pred cccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHH-----HCCCeEEEEecccCccCCCCchHHHHHHHHHhc
Confidence 33344567766656443 1 122334444444443 2245554443 2233 222333332
Q ss_pred CCCCCEEE-ecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceee-cC----C
Q 036427 406 DWKIPVQV-KGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF-SK----S 477 (536)
Q Consensus 406 ~~~~~V~~-~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~-~~----d 477 (536)
....++++ .+.. .++..+++.||++|..=- ..++=|++.|+|+|.+.+.. .....+...|...+ +. +
T Consensus 304 ~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-Ha~I~a~~~gvP~i~i~Y~~----K~~~~~~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 304 SDPARYHVVMDELNDLEMGKILGACELTVGTRL-HSAIISMNFGTPAIAINYEH----KSAGIMQQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccccceeEecCCCChHHHHHHHhhCCEEEEecc-hHHHHHHHcCCCEEEeeehH----HHHHHHHHcCCccEEechhhCC
Confidence 22233333 3222 367799999999996433 45677999999999999732 12333444454433 22 6
Q ss_pred HHHHHHHHHHHhCCCHHH-HHHHHHHH
Q 036427 478 PKEIANMVSQWFGPKIDE-LKAMSQNA 503 (536)
Q Consensus 478 ~~~La~~I~~ll~~d~~~-~~~m~~~a 503 (536)
.++|.+.+.++++ +.+. ++++.++.
T Consensus 379 ~~~Li~~v~~~~~-~r~~~~~~l~~~v 404 (426)
T PRK10017 379 DGSLQAMVADTLG-QLPALNARLAEAV 404 (426)
T ss_pred HHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 7889999999999 7554 44444433
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=109.33 Aligned_cols=172 Identities=16% Similarity=0.172 Sum_probs=108.4
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++...+.-..++.+|++..|+.......+.+..+++++.+ -+. ++++...... ...+ ..|+.+..|+
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~----~~~-~~iW~~~~~~--~~~l-----~~n~~~~~W~ 331 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFEN----LPQ-RFIWKYEGEP--PENL-----PKNVLIVKWL 331 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHC----STT-EEEEEETCSH--GCHH-----HTTEEEESS-
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhh----CCC-cccccccccc--cccc-----cceEEEeccc
Confidence 34444443223567888888876544445557778887762 233 7777665532 1222 2489999999
Q ss_pred hhHHHHHhh--cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCC
Q 036427 418 SKMEEAMGA--CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGP 491 (536)
Q Consensus 418 ~~l~~ll~~--aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~ 491 (536)
++ .++|+. .+++|+++|.+++.||+.+|+|+|+.|..++|.. |+..+++.|.|..++ +.+++.++|+++++
T Consensus 332 PQ-~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~-na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~- 408 (500)
T PF00201_consen 332 PQ-NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPR-NAARVEEKGVGVVLDKNDLTEEELRAAIREVLE- 408 (500)
T ss_dssp -H-HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHH-HHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHH-
T ss_pred cc-hhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCc-cceEEEEEeeEEEEEecCCcHHHHHHHHHHHHh-
Confidence 86 577864 5679999999999999999999999999998875 999999999998875 78999999999999
Q ss_pred CHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHh
Q 036427 492 KIDELKAMSQNALKLARP--DAVFRIVQDLHELVR 524 (536)
Q Consensus 492 d~~~~~~m~~~a~~~a~~--~~~~~i~~~i~~l~~ 524 (536)
|+.+++++.+.+..+... ...++.+.-++-+++
T Consensus 409 ~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~ 443 (500)
T PF00201_consen 409 NPSYKENAKRLSSLFRDRPISPLERAVWWIEYVAR 443 (500)
T ss_dssp SHHHHHHHHHHHHTTT-------------------
T ss_pred hhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 998888777776654432 334444444444443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.1e-06 Score=91.05 Aligned_cols=144 Identities=15% Similarity=0.095 Sum_probs=94.9
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---HHHH-----HHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---KKLA-----NKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---~~l~-----~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-...+ +..++..+. ..+..++++.... .+.. +.+.+.-...+
T Consensus 272 ~cl~wLd~~~~~sVvyvsfGS~~~~~~~q-~~e~a~gl~-----~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g 345 (491)
T PLN02534 272 QCLEWLDSMKPRSVIYACLGSLCRLVPSQ-LIELGLGLE-----ASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRG 345 (491)
T ss_pred HHHHHHhcCCCCceEEEEecccccCCHHH-HHHHHHHHH-----hCCCCEEEEEecCccccchhhhcCchhhHHhhccCC
Confidence 34555555555678888888765333222 334445554 1234677766521 1111 11222212457
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cceee-------------
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKF------------- 474 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~------------- 474 (536)
+.+.+|+++ .+++..+++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++. +.|+-
T Consensus 346 ~~v~~w~pq-~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~-na~~~~e~~~vGv~~~~~~~~~~~~~~ 423 (491)
T PLN02534 346 LLIKGWAPQ-VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFL-NEKLIVEVLRIGVRVGVEVPVRWGDEE 423 (491)
T ss_pred eeccCCCCH-HHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHH-HHHHHHHhhcceEEecccccccccccc
Confidence 888899976 678988887 9999999999999999999999999888765 77777633 33332
Q ss_pred ----cCCHHHHHHHHHHHhC
Q 036427 475 ----SKSPKEIANMVSQWFG 490 (536)
Q Consensus 475 ----~~d~~~La~~I~~ll~ 490 (536)
+-+.++++++|++++.
T Consensus 424 ~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 424 RVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccCccCHHHHHHHHHHHhc
Confidence 1267899999999995
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.4e-06 Score=88.43 Aligned_cols=145 Identities=14% Similarity=0.122 Sum_probs=97.7
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----H---HHHHHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-----K---KLANKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~---~l~~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-. .+.+..++..+. ..+.++|++.... . .+.+.+.+ ....+
T Consensus 266 ~~~~wLd~~~~~sVvyvsfGS~~~~~-~~q~~ela~~l~-----~~~~~flW~~~~~~~~~~~~~~~lp~~~~~-~~~~~ 338 (480)
T PLN02555 266 DCIEWLDSKPPSSVVYISFGTVVYLK-QEQIDEIAYGVL-----NSGVSFLWVMRPPHKDSGVEPHVLPEEFLE-KAGDK 338 (480)
T ss_pred hHHHHHhCCCCCceeEEEeccccCCC-HHHHHHHHHHHH-----hcCCeEEEEEecCcccccchhhcCChhhhh-hcCCc
Confidence 44455544444457777777654322 233444555553 2345677765421 0 01111111 13457
Q ss_pred EEEecChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC---------CH
Q 036427 411 VQVKGFVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK---------SP 478 (536)
Q Consensus 411 V~~~G~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~---------d~ 478 (536)
+.+.+|+++ .+++ .++.++|+++|.++++||+.+|+|+|+.|...+|.. |+..+++. |.|+.+. +.
T Consensus 339 g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~-Na~~~~~~~gvGv~l~~~~~~~~~v~~ 416 (480)
T PLN02555 339 GKIVQWCPQ-EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVT-DAVYLVDVFKTGVRLCRGEAENKLITR 416 (480)
T ss_pred eEEEecCCH-HHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHH-HHHHHHHHhCceEEccCCccccCcCcH
Confidence 888899976 5677 567889999999999999999999999999888875 88988887 8887761 57
Q ss_pred HHHHHHHHHHhCCCH
Q 036427 479 KEIANMVSQWFGPKI 493 (536)
Q Consensus 479 ~~La~~I~~ll~~d~ 493 (536)
+++.++|++++. ++
T Consensus 417 ~~v~~~v~~vm~-~~ 430 (480)
T PLN02555 417 EEVAECLLEATV-GE 430 (480)
T ss_pred HHHHHHHHHHhc-Cc
Confidence 899999999997 53
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-07 Score=96.95 Aligned_cols=198 Identities=18% Similarity=0.139 Sum_probs=123.9
Q ss_pred cCCEEEEcCHHHHHH-HHHh---CCCCCCEEEeCCCCCCCC-CCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKA---GLQASQIKVYGLPVRPSF-VKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~---g~~~~ki~vignpv~~~~-~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.++.+++.|-+..+. +.++ .....++..+|.-+.... ... .....+..+.+.-.+...+|++..|+...-. .+
T Consensus 208 ~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~-~~ 286 (451)
T PLN03004 208 KSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFS-KE 286 (451)
T ss_pred ccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCC-HH
Confidence 455666655444432 2221 111135777776542111 000 1111234455544445568888888764322 34
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH----------H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECC
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK----------K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKA 434 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~----------~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~s 434 (536)
.+.+++..+.. .+..++++..... . +.+.+.+.-...++.+.+|+++ .++++++++ +|+++
T Consensus 287 q~~ela~gL~~-----s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ-~~iL~H~~v~~FvTH~ 360 (451)
T PLN03004 287 QVIEIAVGLEK-----SGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQ-VPVLNHKAVGGFVTHC 360 (451)
T ss_pred HHHHHHHHHHH-----CCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCH-HHHhCCCccceEeccC
Confidence 45566666642 3346777765321 0 1111222222457888999976 579999998 99999
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC-------CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK-------SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~-------d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
|.++++||+++|+|+|+.|...+|.. |++.+++ .|.|..+. +.++++++|+++++ +++++++..
T Consensus 361 G~nS~lEal~~GVP~v~~P~~~DQ~~-na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~-~~~~r~~a~ 432 (451)
T PLN03004 361 GWNSILEAVCAGVPMVAWPLYAEQRF-NRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIG-ECPVRERTM 432 (451)
T ss_pred cchHHHHHHHcCCCEEeccccccchh-hHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 99999999999999999999888875 8888875 58887662 68999999999998 866554433
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-06 Score=99.55 Aligned_cols=265 Identities=11% Similarity=0.106 Sum_probs=161.7
Q ss_pred HHhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHH
Q 036427 242 LMKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRA 309 (536)
Q Consensus 242 l~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l 309 (536)
.+..+| |+|.+|..-+..+|..+-++ + ++.++-.+.|- |.. +.+ ..+ .-.+|.|=..+....+.+
T Consensus 226 ~~~~~~gD~VWVHDYHL~LlP~~LR~~-~--p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhF 302 (934)
T PLN03064 226 NEHYEEGDVVWCHDYHLMFLPKCLKEY-N--SNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 302 (934)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHh-C--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHH
Confidence 334555 68888877666666554443 2 23455444442 211 111 111 235678878888877776
Q ss_pred HH-----hCCCC--------C---CEEEeCCCCCCCCCCCCCc-------hHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 310 MK-----AGLQA--------S---QIKVYGLPVRPSFVKPVRP-------KVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 310 ~~-----~g~~~--------~---ki~vignpv~~~~~~~~~~-------~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
.. .|+.. . ++.+.+.++|+..+..... .++++++++ ++++|+.+++....|++.
T Consensus 303 l~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDRLD~~KGI~ 379 (934)
T PLN03064 303 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVDRLDMIKGIP 379 (934)
T ss_pred HHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeeccccccCHH
Confidence 54 13221 1 2445667777765532211 124566654 466888888877788888
Q ss_pred HHHHHHHHHhhhcccCCCCcE--E-EEEe-----cCCHH---HHHHHHcC--------CC--CCCEEEecC-h--hhHHH
Q 036427 367 ATARALGNALYDENLGEPIGQ--V-LVIC-----GRNKK---LANKLLST--------DW--KIPVQVKGF-V--SKMEE 422 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~--~-lvi~-----G~~~~---l~~~l~~~--------~~--~~~V~~~G~-v--~~l~~ 422 (536)
..+.++..-+. .+|.++ + ++.+ +..++ +++++.+. +- -.+|+++.. + +++..
T Consensus 380 ~kL~AfE~fL~----~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~A 455 (934)
T PLN03064 380 QKILAFEKFLE----ENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCA 455 (934)
T ss_pred HHHHHHHHHHH----hCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHH
Confidence 88887766554 245543 2 2211 23232 23333221 10 123444432 2 58999
Q ss_pred HHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCC
Q 036427 423 AMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPK 492 (536)
Q Consensus 423 ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d 492 (536)
+|+.||+++.+| | .++..|+|+|+. +.|++...+ .+..+ ...+++++ |.++++++|.+.|+|+
T Consensus 456 lY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG-----aa~~L--~~~AllVNP~D~~~vA~AI~~AL~M~ 528 (934)
T PLN03064 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG-----AAQSL--GAGAILVNPWNITEVAASIAQALNMP 528 (934)
T ss_pred HHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc-----hHHHh--CCceEEECCCCHHHHHHHHHHHHhCC
Confidence 999999999998 6 899999999954 333454322 23223 22355665 9999999999999989
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 493 IDELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 493 ~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
++.++...++.++++..+.+.+.++.+++-+
T Consensus 529 ~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 529 EEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred HHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 9999999999999999998888888765433
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-06 Score=94.27 Aligned_cols=154 Identities=23% Similarity=0.184 Sum_probs=101.1
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---------------H-HHHHH
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---------------K-LANKL 402 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---------------~-l~~~l 402 (536)
++.+.+.-.+...+|++..|+...-. .+.+.+++..+.. .+.+++++..... + +.+.+
T Consensus 263 ~~~~wLd~~~~~svvyvsfGS~~~~~-~~~~~~la~~l~~-----~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 336 (481)
T PLN02554 263 EILRWLDEQPPKSVVFLCFGSMGGFS-EEQAREIAIALER-----SGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGF 336 (481)
T ss_pred HHHHHHhcCCCCcEEEEeccccccCC-HHHHHHHHHHHHH-----cCCCeEEEEcCCcccccccccccccchhhhCChHH
Confidence 45555543344557888888764322 3355666666642 3346766654310 0 01111
Q ss_pred HcCCCCCCEEEecChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhh-HhhCCceeec----
Q 036427 403 LSTDWKIPVQVKGFVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY-VVENGCGKFS---- 475 (536)
Q Consensus 403 ~~~~~~~~V~~~G~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~-lv~~g~g~~~---- 475 (536)
.+. ...++.+.+|+++ .++| ..+.++|+++|.++++||+.+|+|+|+.|..++|.. |+.. +.+.|+|..+
T Consensus 337 ~~r-~~~~g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~-Na~~~v~~~g~Gv~l~~~~ 413 (481)
T PLN02554 337 LDR-TKDIGKVIGWAPQ-VAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKF-NAFEMVEELGLAVEIRKYW 413 (481)
T ss_pred HHH-hccCceEEeeCCH-HHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchh-hHHHHHHHhCceEEeeccc
Confidence 110 2346777899875 5778 566679999999999999999999999999888875 7754 5667888654
Q ss_pred ---------C--CHHHHHHHHHHHhCCCHHHHHHHHH
Q 036427 476 ---------K--SPKEIANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 476 ---------~--d~~~La~~I~~ll~~d~~~~~~m~~ 501 (536)
. +.+++.++|+++++.+++++++..+
T Consensus 414 ~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~ 450 (481)
T PLN02554 414 RGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKE 450 (481)
T ss_pred cccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 1 6889999999999525666655443
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.1e-06 Score=92.56 Aligned_cols=219 Identities=17% Similarity=0.104 Sum_probs=126.1
Q ss_pred ccCCEEEEcCHHHHHH-HHHh---CCC-CCCEEEeCCCCCCCC-CC-C--CCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 293 KLVTRCYCPTADVAKR-AMKA---GLQ-ASQIKVYGLPVRPSF-VK-P--VRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~---g~~-~~ki~vignpv~~~~-~~-~--~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+.++.+++.|-+..+. +.++ ... -.++..+|.-..... .. . ..+.+++.+.+.-.+...+|++..|+...-
T Consensus 214 ~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~ 293 (475)
T PLN02167 214 PEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSL 293 (475)
T ss_pred cccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccC
Confidence 3455677665554443 2221 100 125777775432111 00 0 112234555554444556888888876433
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-H-------HHHHHHcCCCCCCEEEecChhhHHHHHhh--cCeEEEC
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNK-K-------LANKLLSTDWKIPVQVKGFVSKMEEAMGA--CDCIITK 433 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~-------l~~~l~~~~~~~~V~~~G~v~~l~~ll~~--aDv~V~~ 433 (536)
. .+.+.+++..+. ..+.++|++.+... . +.+.+.+ ....+..+.+|+++ .+++++ ++++|++
T Consensus 294 ~-~~~~~ela~~l~-----~~~~~flw~~~~~~~~~~~~~~~lp~~~~e-r~~~rg~v~~w~PQ-~~iL~h~~vg~fvtH 365 (475)
T PLN02167 294 P-APQIKEIAQALE-----LVGCRFLWSIRTNPAEYASPYEPLPEGFMD-RVMGRGLVCGWAPQ-VEILAHKAIGGFVSH 365 (475)
T ss_pred C-HHHHHHHHHHHH-----hCCCcEEEEEecCcccccchhhhCChHHHH-HhccCeeeeccCCH-HHHhcCcccCeEEee
Confidence 3 233556666664 23456777665321 0 1111111 11234567789865 578877 5579999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhh-HhhCCceeecC-----------CHHHHHHHHHHHhCCCH-HHHHHH-
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY-VVENGCGKFSK-----------SPKEIANMVSQWFGPKI-DELKAM- 499 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~-lv~~g~g~~~~-----------d~~~La~~I~~ll~~d~-~~~~~m- 499 (536)
+|.++++||+++|+|+|+.|...+|.. |+.. +.+.|+|..+. +.++++++|++++. ++ +.++++
T Consensus 366 ~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~r~~a~ 443 (475)
T PLN02167 366 CGWNSVLESLWFGVPIATWPMYAEQQL-NAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMD-GEDVPRKKVK 443 (475)
T ss_pred CCcccHHHHHHcCCCEEeccccccchh-hHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhc-CCHHHHHHHH
Confidence 999999999999999999999988876 7765 45678886541 67899999999997 44 444433
Q ss_pred --HHHHHHhcCCc-hHHHHHHHHHH
Q 036427 500 --SQNALKLARPD-AVFRIVQDLHE 521 (536)
Q Consensus 500 --~~~a~~~a~~~-~~~~i~~~i~~ 521 (536)
++.+++...+. ++.+-.+.+.+
T Consensus 444 ~~~~~~~~av~~gGsS~~~l~~~v~ 468 (475)
T PLN02167 444 EIAEAARKAVMDGGSSFVAVKRFID 468 (475)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34444444443 34443344333
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.59 E-value=7e-06 Score=87.80 Aligned_cols=208 Identities=14% Similarity=0.052 Sum_probs=125.6
Q ss_pred ccCCEEEEcCHHHHHH-HHHhC--CC-CCCEEEeCCCCCCCCCCCC----CchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 293 KLVTRCYCPTADVAKR-AMKAG--LQ-ASQIKVYGLPVRPSFVKPV----RPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~g--~~-~~ki~vignpv~~~~~~~~----~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
+.++.+++.|.+..+. ..++- .+ ..++..+|.-......... ...++..+.+.-.+...+|++..|+...-
T Consensus 210 ~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~- 288 (468)
T PLN02207 210 TKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRL- 288 (468)
T ss_pred ccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCC-
Confidence 3466777777666554 22211 01 1357777765321110000 11234555554444456888888875532
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChH
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPG 437 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~ 437 (536)
..+.+.+++..+. ..+..++++..... .+.+.+.+ ....+..+.+|.++ .+++++..+ +|+++|.+
T Consensus 289 ~~~q~~ela~~l~-----~~~~~flW~~r~~~~~~~~~lp~~f~e-r~~~~g~i~~W~PQ-~~IL~H~~vg~FvTH~Gwn 361 (468)
T PLN02207 289 RGPLVKEIAHGLE-----LCQYRFLWSLRTEEVTNDDLLPEGFLD-RVSGRGMICGWSPQ-VEILAHKAVGGFVSHCGWN 361 (468)
T ss_pred CHHHHHHHHHHHH-----HCCCcEEEEEeCCCccccccCCHHHHh-hcCCCeEEEEeCCH-HHHhcccccceeeecCccc
Confidence 2445666666665 23346777665311 01111111 12356777899876 567877665 99999999
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-----------CCHHHHHHHHHHHhCC-CHHHHHHHH---H
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-----------KSPKEIANMVSQWFGP-KIDELKAMS---Q 501 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-----------~d~~~La~~I~~ll~~-d~~~~~~m~---~ 501 (536)
+++||+.+|+|+|+.|..++|.. |+..+++ .|.|.-+ -+.+++.++|+++++. ++++|+++. +
T Consensus 362 S~~Eai~~GVP~l~~P~~~DQ~~-Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~ 440 (468)
T PLN02207 362 SIVESLWFGVPIVTWPMYAEQQL-NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQ 440 (468)
T ss_pred cHHHHHHcCCCEEecCccccchh-hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 99999999999999999998875 8888776 6877622 1678999999999951 244444433 3
Q ss_pred HHHHhcCC
Q 036427 502 NALKLARP 509 (536)
Q Consensus 502 ~a~~~a~~ 509 (536)
.+++...+
T Consensus 441 ~a~~A~~~ 448 (468)
T PLN02207 441 MIQRATKN 448 (468)
T ss_pred HHHHHhcC
Confidence 34444344
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=84.71 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||..+.+..|+++|.++ |++|.++.......... .. ....+......... ... . ......
T Consensus 1 GG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~~~~~---~~------~~~~~~~~~~~~~~-~~~----~---~~~~~~ 60 (160)
T PF13579_consen 1 GGIERYVRELARALAAR---GHEVTVVTPQPDPEDDE---EE------EDGVRVHRLPLPRR-PWP----L---RLLRFL 60 (160)
T ss_dssp SHHHHHHHHHHHHHHHT---T-EEEEEEE---GGG-S---EE------ETTEEEEEE--S-S-SSG----G---GHCCHH
T ss_pred CCHHHHHHHHHHHHHHC---CCEEEEEecCCCCcccc---cc------cCCceEEeccCCcc-chh----h---hhHHHH
Confidence 69999999999999999 78887765322211000 00 00001111111100 000 0 011123
Q ss_pred HHHHHHH--HhhCCCEEEEcCcccchHHHHHHH-HcCCCCCceEEEEecCCCCcc------------cccccccCCEEEE
Q 036427 236 REVAKGL--MKYQPDIIISVHPLMQHVPLRILR-AKGLLKKIVFTTVITDLSTCH------------PTWFHKLVTRCYC 300 (536)
Q Consensus 236 ~~l~~~l--~~~kPDvVi~~~~~~~~i~~~~~~-~~g~~~~ip~v~~~~d~~~~~------------~~~~~~~~d~vi~ 300 (536)
..+.+++ ++.+||+||++.+.. .....+++ ..+ +|++...++..... .++..+.+|.+++
T Consensus 61 ~~~~~~l~~~~~~~Dvv~~~~~~~-~~~~~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 135 (160)
T PF13579_consen 61 RRLRRLLAARRERPDVVHAHSPTA-GLVAALARRRRG----IPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIV 135 (160)
T ss_dssp HHHHHHCHHCT---SEEEEEHHHH-HHHHHHHHHHHT------EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHhhhccCCeEEEecccch-hHHHHHHHHccC----CcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEE
Confidence 4666677 788999999988542 22233344 444 89987777643110 1345678999999
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCCC
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGLP 325 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vignp 325 (536)
+|+..++.+.++|++++++.+++||
T Consensus 136 ~S~~~~~~l~~~g~~~~ri~vipnG 160 (160)
T PF13579_consen 136 VSEAMRRYLRRYGVPPDRIHVIPNG 160 (160)
T ss_dssp SSHHHHHHHHHH---GGGEEE----
T ss_pred CCHHHHHHHHHhCCCCCcEEEeCcC
Confidence 9999999999999999999999986
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.3e-05 Score=75.00 Aligned_cols=257 Identities=20% Similarity=0.223 Sum_probs=134.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+.+..+- .|..+.|..||+.|.+. .+.+.+.... . +.+.+..|-..|..
T Consensus 1 ~ki~aisD~R-tGnt~QaiaLa~~l~r~---eyttk~l~~~-~---------------l~~lP~~wl~~yp~-------- 52 (329)
T COG3660 1 MKIWAISDGR-TGNTHQAIALAEQLTRS---EYTTKLLEYN-N---------------LAKLPNFWLAYYPI-------- 52 (329)
T ss_pred CceEEeecCC-CccHHHHHHHHHHhhcc---ceEEEEeecc-c---------------cccCchhhhhcCcc--------
Confidence 7999999886 69999999999999875 5666554321 0 11111111111100
Q ss_pred hhhhhhhHHHHHHHHH-H---HHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEE
Q 036427 225 SNFAATSTFIAREVAK-G---LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYC 300 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~-~---l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~ 300 (536)
...+++.. . ..+..||++|+.+-........+.++.| . +.+..+.| ++.-....|.+++
T Consensus 53 --------~~~~~l~~~~~~r~p~~~Pdl~I~aGrrta~l~~~lkk~~~---~-~~vVqI~~-----Prlp~~~fDlviv 115 (329)
T COG3660 53 --------HILRELFGPRLSRKPEQRPDLIITAGRRTAPLAFYLKKKFG---G-IKVVQIQD-----PRLPYNHFDLVIV 115 (329)
T ss_pred --------HhHHHhhcCccccCccCCCceEEecccchhHHHHHHHHhcC---C-ceEEEeeC-----CCCCcccceEEec
Confidence 00011111 1 1245699999998665443344444444 2 33334433 2233566899998
Q ss_pred cCHHHHHHHHHhCCCCCCEE-EeCCC--CCCCCCCCCCchHHHHHHcCCCCCCCEE-EEecCCCCCCcH-HHHHHHHHHH
Q 036427 301 PTADVAKRAMKAGLQASQIK-VYGLP--VRPSFVKPVRPKVELRRELGMDEDLPAV-LLMGGGEGMGPI-EATARALGNA 375 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~-vignp--v~~~~~~~~~~~~~~r~~lgi~~~~~~i-l~~gg~~g~k~~-~~~l~al~~~ 375 (536)
+-.+..+.... .-.++. +.|.+ +.+.+.. ..+ +..++++ +..++++ +++||..+.-.+ ++-...+...
T Consensus 116 p~HD~~~~~s~---~~~Nilpi~Gs~h~Vt~~~lA--a~~-e~~~~~~-p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~ 188 (329)
T COG3660 116 PYHDWREELSD---QGPNILPINGSPHNVTSQRLA--ALR-EAFKHLL-PLPRQRVAVLVGGNNKAFVFQEDKAHQFASL 188 (329)
T ss_pred cchhhhhhhhc---cCCceeeccCCCCcccHHHhh--hhH-HHHHhhC-CCCCceEEEEecCCCCCCccCHHHHHHHHHH
Confidence 87776654221 223343 33322 2222211 112 3334443 4444444 567776554333 2333333333
Q ss_pred hhhcccCCCCcEEEEEecCC-H-HHHHHHHcC-CCCCCEEEecCh---hhHHHHHhhcCeEEECCC-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRN-K-KLANKLLST-DWKIPVQVKGFV---SKMEEAMGACDCIITKAG-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~-~-~l~~~l~~~-~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG-~~tllEAma~GlP 448 (536)
+.+. +.+.++.+++-.... + ..+..++.. .-..-+.+-+.- +-..++|++||.+|...- -..+.||++.|+|
T Consensus 189 l~k~-l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sEAasTgkP 267 (329)
T COG3660 189 LVKI-LENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSEAASTGKP 267 (329)
T ss_pred HHHH-HHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHHHhccCCC
Confidence 3221 124566666654443 3 445555542 222223333221 246789999999998874 4556799999999
Q ss_pred EEEecc
Q 036427 449 IILNDF 454 (536)
Q Consensus 449 VI~~~~ 454 (536)
|-+.-.
T Consensus 268 v~~~~~ 273 (329)
T COG3660 268 VFILEP 273 (329)
T ss_pred eEEEec
Confidence 998764
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.1e-06 Score=86.18 Aligned_cols=188 Identities=9% Similarity=0.015 Sum_probs=115.6
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
...|.++++++...+.+.+..-+..++.+++-+.- +.... .+ .....+++++- ...++++
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i---~~~~~-~~---------r~~~~~l~~t~-------s~~I~~i 297 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYL---YPFKK-DN---------KYRKQALILTN-------SDQIEHL 297 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEE---Eeecc-cc---------CCcccEEEECC-------HHHHHHH
Confidence 56788999998877776654322344443333322 11100 00 11223444431 3444445
Q ss_pred HHHhhhcccCCCCcEEEEEecCC--HHHHHHHHcCCCCCCEEEecChh-hHHHHHhhcCeEEECC---C-hHHHHHHHHh
Q 036427 373 GNALYDENLGEPIGQVLVICGRN--KKLANKLLSTDWKIPVQVKGFVS-KMEEAMGACDCIITKA---G-PGTIAEAMIR 445 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~--~~l~~~l~~~~~~~~V~~~G~v~-~l~~ll~~aDv~V~~s---G-~~tllEAma~ 445 (536)
....+ .-|++++=+.++.. +++.+. .++ ..-+.+.|+.. ++.++|..||+++..+ | ++++.||+..
T Consensus 298 ~~Lv~----~lPd~~f~Iga~te~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~ 370 (438)
T TIGR02919 298 EEIVQ----ALPDYHFHIAALTEMSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEY 370 (438)
T ss_pred HHHHH----hCCCcEEEEEecCcccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHc
Confidence 44443 24788764444443 334333 443 44566677776 9999999999999877 3 8999999999
Q ss_pred CCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 446 GLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 446 GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
|+|+|+.+...+... ++..|.-+-..++++++++|..+|+ +++..++.-..-++.|..-+.+
T Consensus 371 G~pI~afd~t~~~~~-----~i~~g~l~~~~~~~~m~~~i~~lL~-d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 371 NLLILGFEETAHNRD-----FIASENIFEHNEVDQLISKLKDLLN-DPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred CCcEEEEecccCCcc-----cccCCceecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhccCCHH
Confidence 999999997654332 3333322223499999999999999 9987776666666666554444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.7e-07 Score=76.06 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=65.9
Q ss_pred hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-ceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHH
Q 036427 436 PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVF 513 (536)
Q Consensus 436 ~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~ 513 (536)
...++|+|+||+|+|..+..+ ...+...| .+..++|++++.+++..+++ ||+.+++++++|++++. .++++
T Consensus 12 ~~r~~E~~a~G~~vi~~~~~~------~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~~~~t~~ 84 (92)
T PF13524_consen 12 NMRIFEAMACGTPVISDDSPG------LREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERVLKRHTWE 84 (92)
T ss_pred chHHHHHHHCCCeEEECChHH------HHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhCCHH
Confidence 679999999999999987522 23345555 56667899999999999999 99999999999999886 68999
Q ss_pred HHHHHHHH
Q 036427 514 RIVQDLHE 521 (536)
Q Consensus 514 ~i~~~i~~ 521 (536)
+.+++|++
T Consensus 85 ~~~~~il~ 92 (92)
T PF13524_consen 85 HRAEQILE 92 (92)
T ss_pred HHHHHHHC
Confidence 98888763
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.1e-06 Score=90.49 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=111.1
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCC-CCEEEec
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWK-IPVQVKG 415 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~-~~V~~~G 415 (536)
.|+.||++++..++..+ . ...|-..+.+....+.++. -|+.++++...... .+.+.+.+.++. +++.|.+
T Consensus 275 ~R~~~gLp~d~vvF~~f-n-~~~KI~p~~l~~W~~IL~~----vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~ 348 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSF-N-NLFKISPETLDLWARILKA----VPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSP 348 (468)
T ss_dssp ETGGGT--SSSEEEEE--S--GGG--HHHHHHHHHHHHH----STTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE
T ss_pred CHHHcCCCCCceEEEec-C-ccccCCHHHHHHHHHHHHh----CCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 36789999886433332 2 2234445666666666653 47777655543322 355566666654 6799988
Q ss_pred Chh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHh
Q 036427 416 FVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWF 489 (536)
Q Consensus 416 ~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll 489 (536)
..+ +.-..++.+|+++=+. |+.|.+||+.+|+|||..+.........+..+...|+.-++ .|.++..+...+|-
T Consensus 349 ~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La 428 (468)
T PF13844_consen 349 VAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLA 428 (468)
T ss_dssp ---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHh
Confidence 753 4455678899988542 78999999999999999996655555566777788876655 58999999988999
Q ss_pred CCCHHHHHHHHHHHHHhc---CCchHHHHHHHHHHHHhh
Q 036427 490 GPKIDELKAMSQNALKLA---RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 490 ~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~i~~l~~~ 525 (536)
+ |++.++++++.-++.. .-+...+.++.+++.+++
T Consensus 429 ~-D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 429 T-DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp H--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 9 9999999998876532 236777888888887753
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00024 Score=75.21 Aligned_cols=268 Identities=12% Similarity=0.065 Sum_probs=144.1
Q ss_pred HHHHHHHhhCCCEEEEcCcccc--hHHHHHHHHcCCCCCceE-EEEec-CCCCcccccccccCCEEEEcCHHHHHHHHHh
Q 036427 237 EVAKGLMKYQPDIIISVHPLMQ--HVPLRILRAKGLLKKIVF-TTVIT-DLSTCHPTWFHKLVTRCYCPTADVAKRAMKA 312 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~~--~i~~~~~~~~g~~~~ip~-v~~~~-d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~ 312 (536)
...+-|+....||.+-...... ..+.+++|- -|+ |++.. +...-.+..-+-.+|.++++ +....++.+.
T Consensus 326 e~a~~I~~d~IdILvDl~g~T~d~r~~v~A~Rp------APiqvswlGy~aT~g~p~~DY~I~D~y~vP-p~ae~yysEk 398 (620)
T COG3914 326 EIANAIRTDGIDILVDLDGHTVDTRCQVFAHRP------APIQVSWLGYPATTGSPNMDYFISDPYTVP-PTAEEYYSEK 398 (620)
T ss_pred HHHHHHHhcCCeEEEeccCceeccchhhhhcCC------CceEEeecccccccCCCcceEEeeCceecC-chHHHHHHHH
Confidence 5566788889999986544322 112333321 343 23322 11111111112345555555 5555555443
Q ss_pred CCCCCCEEEeCCCCCCCCC-CCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEE
Q 036427 313 GLQASQIKVYGLPVRPSFV-KPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVI 391 (536)
Q Consensus 313 g~~~~ki~vignpv~~~~~-~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi 391 (536)
-+. +-.++-|+|-... .+. --|..+||+++..++++. .-..|...+.++.-.+.++. -|+-.+++.
T Consensus 399 l~R---Lp~cy~p~d~~~~v~p~----~sR~~lglp~~avVf~c~--~n~~K~~pev~~~wmqIL~~----vP~Svl~L~ 465 (620)
T COG3914 399 LWR---LPQCYQPVDGFEPVTPP----PSRAQLGLPEDAVVFCCF--NNYFKITPEVFALWMQILSA----VPNSVLLLK 465 (620)
T ss_pred HHh---cccccCCCCCcccCCCC----cchhhcCCCCCeEEEEec--CCcccCCHHHHHHHHHHHHh----CCCcEEEEe
Confidence 111 1134445543321 111 125678999875444333 33345556666666666653 366655444
Q ss_pred ec-CCHHH----HHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 392 CG-RNKKL----ANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 392 ~G-~~~~l----~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
.| ..++. ++..++.+. .+++.|.+.. ++..+.|..||+++=.- |..|.+||+-+|+|||.-....-...
T Consensus 466 ~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~G~~FasR 545 (620)
T COG3914 466 AGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRVGEQFASR 545 (620)
T ss_pred cCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCCccchHHHHHhcCceeeeccHHHHHh
Confidence 44 23333 334444453 4689998876 47788899999988542 57899999999999999763222222
Q ss_pred CChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc---CCchHHHHHHHHHHHHhh
Q 036427 461 GNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA---RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 461 ~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~i~~l~~~ 525 (536)
.....+...|..-++ .+.++..++--.+=. |...+++.+..-.+.. .-+.....++++++++.+
T Consensus 546 ~~~si~~~agi~e~vA~s~~dYV~~av~~g~-dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 546 NGASIATNAGIPELVADSRADYVEKAVAFGS-DRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred hhHHHHHhcCCchhhcCCHHHHHHHHHHhcc-cHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 234445555654433 355555444445545 6666665554332211 125667788888777654
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-05 Score=85.33 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=115.4
Q ss_pred ccCCEEEEcCHHHHHH-HHHh---C--CC---CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 293 KLVTRCYCPTADVAKR-AMKA---G--LQ---ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~---g--~~---~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+.++.+++.|-+..+. +.++ . .. ..++..+|+-+..... ..+.++..+.+.-.+...++++..|+...-
T Consensus 203 ~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~--~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~ 280 (470)
T PLN03015 203 PMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH--VEKRNSIFEWLDKQGERSVVYVCLGSGGTL 280 (470)
T ss_pred ccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc--ccchHHHHHHHHhCCCCCEEEEECCcCCcC
Confidence 3566777766555443 2221 1 00 1247777765532211 112234556665555567888888887543
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----------HHHH----HHHHcCCCCCCEEEecChhhHHHHHhhcC
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRN-----------KKLA----NKLLSTDWKIPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----------~~l~----~~l~~~~~~~~V~~~G~v~~l~~ll~~aD 428 (536)
. .+.+.+++..+.. .+..++++.... +... +.+.+.-....+.+.+|.++ .+++++..
T Consensus 281 ~-~~q~~ela~gl~~-----s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ-~~vL~h~~ 353 (470)
T PLN03015 281 T-FEQTVELAWGLEL-----SGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQ-VEILSHRS 353 (470)
T ss_pred C-HHHHHHHHHHHHh-----CCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCH-HHHhccCc
Confidence 3 3445666666652 334677765311 0011 11111111123667799876 46777765
Q ss_pred e--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhH-hhCCceeecC--------CHHHHHHHHHHHhC
Q 036427 429 C--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYV-VENGCGKFSK--------SPKEIANMVSQWFG 490 (536)
Q Consensus 429 v--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~l-v~~g~g~~~~--------d~~~La~~I~~ll~ 490 (536)
+ +|+++|.++++||+.+|+|+|+.|...+|.. |+..+ ...|+|..+. +.++++++|+++++
T Consensus 354 vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~-na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 354 IGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWM-NATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVA 425 (470)
T ss_pred cCeEEecCCchhHHHHHHcCCCEEecccccchHH-HHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence 4 9999999999999999999999999888875 88877 4567776551 67899999999994
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.8e-05 Score=76.47 Aligned_cols=274 Identities=12% Similarity=0.064 Sum_probs=130.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||+-.+. -|..-.+..+.++|++.+| +.+|.++.... ...+.+..|.....+........
T Consensus 1 mrILii~~~~-iGD~il~tP~l~~Lk~~~P-~a~I~~l~~~~-------------~~~l~~~~P~vd~vi~~~~~~~~-- 63 (348)
T PRK10916 1 MKILVIGPSW-VGDMMMSQSLYRTLKARYP-QAIIDVMAPAW-------------CRPLLSRMPEVNEAIPMPLGHGA-- 63 (348)
T ss_pred CcEEEEccCc-ccHHHhHHHHHHHHHHHCC-CCeEEEEechh-------------hHHHHhcCCccCEEEecccccch--
Confidence 6899997654 4999999999999999988 56664443211 11123333322222211111000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCC-cccccccccCCEEEEcC
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLST-CHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~-~~~~~~~~~~d~vi~~S 302 (536)
.......++.+.|++.++|+++........ ..+....| ++. +.+...... ....+ +..+.. ..
T Consensus 64 -----~~~~~~~~l~~~lr~~~yD~vidl~~~~~s--~~l~~~~~----~~~rig~~~~~~~~~~~~~--~~~~~~--~~ 128 (348)
T PRK10916 64 -----LEIGERRRLGHSLREKRYDRAYVLPNSFKS--ALVPFFAG----IPHRTGWRGEMRYGLLNDL--RVLDKE--AF 128 (348)
T ss_pred -----hhhHHHHHHHHHHHhcCCCEEEECCCcHHH--HHHHHHcC----CCeEeecccCccccccccc--cccCcc--cC
Confidence 011122356677899999999987654321 22333334 222 111111000 00000 000110 01
Q ss_pred HHHHHHHHHhCCCCC---CEEEeCCCC-CCCCCCCCCchHHHHHHcCCCCCCCEEEEe-cCCC-CCCc-HHHHHHHHHHH
Q 036427 303 ADVAKRAMKAGLQAS---QIKVYGLPV-RPSFVKPVRPKVELRRELGMDEDLPAVLLM-GGGE-GMGP-IEATARALGNA 375 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~---ki~vignpv-~~~~~~~~~~~~~~r~~lgi~~~~~~il~~-gg~~-g~k~-~~~~l~al~~~ 375 (536)
....+.+.....+.. ...-+..+. .+.........+.....+++..++++|++. |++. ..|. ..+.+.++++.
T Consensus 129 ~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~ 208 (348)
T PRK10916 129 PLMVERYVALAYDKGVMRTAADLPQPLLWPQLQVSEGEKSETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQ 208 (348)
T ss_pred cHHHHHHHHHhcccccccccccCCCCcCCCccccCHHHHHHHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHH
Confidence 122222222110000 000000010 111111111122344455555455666544 4433 2343 34566677766
Q ss_pred hhhcccCCCCcEEEEEecCCH-HHHHHHHcC-CC--CCC-EEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHHHhCC
Q 036427 376 LYDENLGEPIGQVLVICGRNK-KLANKLLST-DW--KIP-VQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAMIRGL 447 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-~~--~~~-V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAma~Gl 447 (536)
+. ..+.++++++|..+ +..+.+.+. .. ..+ +.+.|.. .++..+++.||++|+. ||++ .=|.|.|+
T Consensus 209 l~-----~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDTGp~--HlAaA~g~ 281 (348)
T PRK10916 209 LI-----DEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSGLM--HVAAALNR 281 (348)
T ss_pred HH-----HCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEEecCChHH--HHHHHhCC
Confidence 64 23566666655443 223333322 11 111 4556654 6999999999999987 4654 44999999
Q ss_pred cEEEeccCCc
Q 036427 448 PIILNDFIAG 457 (536)
Q Consensus 448 PVI~~~~~~~ 457 (536)
|+|+.=.+.+
T Consensus 282 P~valfGpt~ 291 (348)
T PRK10916 282 PLVALYGPSS 291 (348)
T ss_pred CEEEEECCCC
Confidence 9998765443
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.3e-06 Score=85.58 Aligned_cols=221 Identities=16% Similarity=0.127 Sum_probs=121.3
Q ss_pred ccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCCCCcH---
Q 036427 291 FHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEGMGPI--- 365 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g~k~~--- 365 (536)
..+..|.+++.|+...+.+.+ .+.+.+++.++|.|-.+..+.... ..+.+++.++++.++++||++.........
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~ 210 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYF 210 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGS
T ss_pred hccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccc
Confidence 356788999999999988877 478888999999986655443332 246788889999988888887542221111
Q ss_pred -----HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChhhHHHHHhhcCeEEECCChHHH
Q 036427 366 -----EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTI 439 (536)
Q Consensus 366 -----~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tl 439 (536)
......+. .+. ..++. ++.-.++........ .....+|.+...-.++.++|..||++|+-- +.++
T Consensus 211 ~~~~~~~~~~~l~-~~~-----~~~~~--li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~aDiLITDy-SSi~ 281 (369)
T PF04464_consen 211 KFFFSDLDFEKLN-FLL-----KNNYV--LIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLLAAADILITDY-SSII 281 (369)
T ss_dssp S----TT-HHHHH-HHH-----TTTEE--EEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHHHT-SEEEESS--THH
T ss_pred cccccccCHHHHH-HHh-----CCCcE--EEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHHHhcCEEEEec-hhHH
Confidence 11223333 221 34443 333445543333332 334567888777678999999999999863 3488
Q ss_pred HHHHHhCCcEEEeccCCc---cccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHH-HHHHHHH---hcCCchH
Q 036427 440 AEAMIRGLPIILNDFIAG---QEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA-MSQNALK---LARPDAV 512 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~---~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~-m~~~a~~---~a~~~~~ 512 (536)
.|++.+++|||.....-. .+.+--....+..-|..+.+.++|.++|+.+++ +++..++ ..+...+ .....++
T Consensus 282 fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~Dg~s~ 360 (369)
T PF04464_consen 282 FDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIE-NPDEYKEKREKFRDKFFKYNDGNSS 360 (369)
T ss_dssp HHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHH-HHHHTHHHHHHHHHHHSTT--S-HH
T ss_pred HHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhCCCCCchHH
Confidence 999999999998765322 111111112334446667799999999999887 5543322 2222223 3455788
Q ss_pred HHHHHHHHH
Q 036427 513 FRIVQDLHE 521 (536)
Q Consensus 513 ~~i~~~i~~ 521 (536)
++|++.|..
T Consensus 361 eri~~~I~k 369 (369)
T PF04464_consen 361 ERIVNYIFK 369 (369)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999888753
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00027 Score=72.75 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=130.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||||+-.+. -|..-.+..+.++|++.+| +.+|.++.... ...+.+..|.....+........
T Consensus 1 rILii~~~~-iGD~i~~~p~l~~Lk~~~P-~a~I~~l~~~~-------------~~~l~~~~p~id~v~~~~~~~~~--- 62 (334)
T TIGR02195 1 KILVIGPSW-VGDMVMAQSLYRLLKKRYP-QAVIDVLAPAW-------------CRPLLERMPEIRQAIDMPLGHGA--- 62 (334)
T ss_pred CEEEEccch-hHHHHHHHHHHHHHHHHCC-CCEEEEEechh-------------hHHHHhcCchhceeeecCCcccc---
Confidence 688887654 5999999999999999998 46665443211 11122322322222211110000
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcccccccccC--CEEEEcC
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCHPTWFHKLV--TRCYCPT 302 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~~~~~~~~~--d~vi~~S 302 (536)
.......++.+.+++.++|+++........ ..+....+ ++. +-+..... ..++.... ... ..
T Consensus 63 ----~~~~~~~~~~~~lr~~~yD~vi~l~~~~~s--~ll~~~~~----~~~riG~~~~~~---~~~~~~~~~~~~~--~~ 127 (334)
T TIGR02195 63 ----LELTERRRLGRSLREERYDQAIVLPNSLKS--ALIPFFAG----IPHRTGWRGEMR---YGLLNDVRALDKE--RL 127 (334)
T ss_pred ----hhhhHHHHHHHHHhhcCCCEEEECCCCHHH--HHHHHHcC----CCceeeecCCCc---ceecccCcCCCcc--cc
Confidence 011122356677888999999987654321 22233333 222 11111110 00000000 000 01
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCC-CCCCCCCCCCchHHHHHHcCCCCCCCEEEEec-CCC-CCCc-HHHHHHHHHHHhhh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLP-VRPSFVKPVRPKVELRRELGMDEDLPAVLLMG-GGE-GMGP-IEATARALGNALYD 378 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignp-v~~~~~~~~~~~~~~r~~lgi~~~~~~il~~g-g~~-g~k~-~~~~l~al~~~l~~ 378 (536)
....+.+.....+.. .. +... ..+.........+.+..+++++.++++|++.. ++. ..+. ..+.+.++++.+.
T Consensus 128 ~h~~~~~~~l~~~~~-~~-~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~- 204 (334)
T TIGR02195 128 PLMVERYIALAYDKG-QD-LPQPLPRPQLQVSPAEQAAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLI- 204 (334)
T ss_pred cHHHHHHHHHhcccc-CC-CCCCCCCCcccCCHHHHHHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHH-
Confidence 122233222211100 00 0000 11111111112234456677766666665544 433 2333 3456666766664
Q ss_pred cccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC-ChHHHHHHHHhCCcEEEecc
Q 036427 379 ENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-GPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~ 454 (536)
..+.++++++|..+ +..+.+.+......+.+.|.. .++..+++.||++|+.- |++ .=|.|+|+|+|+.-.
T Consensus 205 ----~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~~DSGp~--HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 205 ----DQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAKAVVTNDSGLM--HVAAALNRPLVALYG 278 (334)
T ss_pred ----HCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCCEEEeeCCHHH--HHHHHcCCCEEEEEC
Confidence 23456655555443 233444432111223356654 69999999999999874 544 448999999999766
Q ss_pred CCc
Q 036427 455 IAG 457 (536)
Q Consensus 455 ~~~ 457 (536)
+.+
T Consensus 279 ~t~ 281 (334)
T TIGR02195 279 STS 281 (334)
T ss_pred CCC
Confidence 544
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00016 Score=70.56 Aligned_cols=212 Identities=18% Similarity=0.147 Sum_probs=117.4
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC---CCcHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG---MGPIEATA 369 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g---~k~~~~~l 369 (536)
+.+-.+|.-...+.+.+...|++ ...+|||+.+-...++.+..-+ -...++|...-|+.. ..+...++
T Consensus 177 rrc~~vf~rD~~Taq~L~~rgvn---a~~vGnpmmD~L~p~~~~~q~l------~~g~~viaLLPGsR~pea~~nl~~il 247 (412)
T COG4370 177 RRCWAVFPRDALTAQHLANRGVN---AAYVGNPMMDGLPPPERDPQLL------LTGVPVIALLPGSRVPEAQTNLAVIL 247 (412)
T ss_pred ccceeeeccccccHHHHHhcCCc---hhhccChhhccCCCccCCchhh------ccCCceEEecCCCCChHHHhhHHHHH
Confidence 44555666666667777777776 5678998876554433222211 133456666666542 12222222
Q ss_pred HHHHHHhhhcccCCCCcEEEE--EecCCH-HHHHHHHcCCCC--------CCEEEecChhhHHHHHhhcCeEEECCChHH
Q 036427 370 RALGNALYDENLGEPIGQVLV--ICGRNK-KLANKLLSTDWK--------IPVQVKGFVSKMEEAMGACDCIITKAGPGT 438 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lv--i~G~~~-~l~~~l~~~~~~--------~~V~~~G~v~~l~~ll~~aDv~V~~sG~~t 438 (536)
..+-.... ....+.++- .-+-.. -+....++.++. ++..+.=....+.++++.+|+.+..+| |
T Consensus 248 ~slcal~~----~~a~vvfw~ai~~~lpl~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsfadiLH~adaalgmAG--T 321 (412)
T COG4370 248 GSLCALPA----MFALVVFWAAIAPELPLLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSFADILHAADAALGMAG--T 321 (412)
T ss_pred HHHhhhHH----HHHHHHHHhccCcCCCHHHHHHHHHhcCcchhhhhhccCceEEEEeHHHHHHHHHHHHHHHHhcc--c
Confidence 22211111 011111111 111111 122333333322 233333334578999999999877666 4
Q ss_pred HHH-HHHhCCcEEEeccCCccccCChhhHhh----CCceee-cC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCc
Q 036427 439 IAE-AMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKF-SK-SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPD 510 (536)
Q Consensus 439 llE-Ama~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~-~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~ 510 (536)
..| +.-.|+|||.+|..+-+. |..+.+. .|+... ++ .+.+-....++++. |++.......+++++. +..
T Consensus 322 AtEQavGLGkPvi~fPg~GPQy--~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~-dp~r~~air~nGqrRiGqaG 398 (412)
T COG4370 322 ATEQAVGLGKPVIGFPGQGPQY--NPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLG-DPQRLTAIRHNGQRRIGQAG 398 (412)
T ss_pred hHHHhhccCCceeecCCCCCCc--ChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhc-ChHHHHHHHhcchhhccCcc
Confidence 455 899999999999765443 3333332 255443 34 44444455555999 9999999999998765 556
Q ss_pred hHHHHHHHHHHH
Q 036427 511 AVFRIVQDLHEL 522 (536)
Q Consensus 511 ~~~~i~~~i~~l 522 (536)
...+|++++.+.
T Consensus 399 aa~rIAe~l~e~ 410 (412)
T COG4370 399 AARRIAEELGEM 410 (412)
T ss_pred hHHHHHHHHHHh
Confidence 777788887664
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00022 Score=72.40 Aligned_cols=191 Identities=18% Similarity=0.154 Sum_probs=103.0
Q ss_pred HHhhCCCEEEEcCcccchHHHHHHHH-cCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhCC-CCCCE
Q 036427 242 LMKYQPDIIISVHPLMQHVPLRILRA-KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGL-QASQI 319 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~~i~~~~~~~-~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki 319 (536)
++.-.||+||+.+...... .+.+++ .|- +.+.|.+. .++.....+|.++++..+ +. ...++
T Consensus 53 ~~~~~pdLiIsaGr~t~~~-~~~l~r~~gg--~~~~V~i~------~P~~~~~~FDlvi~p~HD--------~~~~~~Nv 115 (311)
T PF06258_consen 53 LEPPWPDLIISAGRRTAPA-ALALRRASGG--RTKTVQIM------DPRLPPRPFDLVIVPEHD--------RLPRGPNV 115 (311)
T ss_pred ccCCCCcEEEECCCchHHH-HHHHHHHcCC--CceEEEEc------CCCCCccccCEEEECccc--------CcCCCCce
Confidence 4455699999999765443 333443 331 23443332 233446788999998765 23 23444
Q ss_pred EEe-CC--CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH-H----HHHHHHHHHhhhcccCCCCcEEEEE
Q 036427 320 KVY-GL--PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI-E----ATARALGNALYDENLGEPIGQVLVI 391 (536)
Q Consensus 320 ~vi-gn--pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~-~----~~l~al~~~l~~~~~~~~~~~~lvi 391 (536)
..+ +. .+.++... ....++..++.-.+...+.+++||......+ . .++..+.+... ..+..+++.
T Consensus 116 l~t~ga~~~i~~~~l~--~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~vt 188 (311)
T PF06258_consen 116 LPTLGAPNRITPERLA--EAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAA-----AYGGSLLVT 188 (311)
T ss_pred EecccCCCcCCHHHHH--HHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHH-----hCCCeEEEE
Confidence 433 22 22221110 1122333444432333445567775443222 2 33344443333 233455554
Q ss_pred ecCC--HHHHHHHHcCC-CCCCEEEecCh--hhHHHHHhhcCeEEECCC-hHHHHHHHHhCCcEEEeccCC
Q 036427 392 CGRN--KKLANKLLSTD-WKIPVQVKGFV--SKMEEAMGACDCIITKAG-PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 392 ~G~~--~~l~~~l~~~~-~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG-~~tllEAma~GlPVI~~~~~~ 456 (536)
.... .+..+.+++.- ....+.+.... +-+..+|+.||.+|+..- -..+.||++.|+||.+.+...
T Consensus 189 tSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 189 TSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 4432 24555555442 33456343332 357899999999999874 455789999999999998754
|
The function of this family is unknown. |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.9e-05 Score=81.36 Aligned_cols=168 Identities=15% Similarity=0.152 Sum_probs=112.3
Q ss_pred CCEEEEecCCCCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHH--HHHHHcCCCCCCEEEecChhhHHHH--
Q 036427 350 LPAVLLMGGGEGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKL--ANKLLSTDWKIPVQVKGFVSKMEEA-- 423 (536)
Q Consensus 350 ~~~il~~gg~~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l--~~~l~~~~~~~~V~~~G~v~~l~~l-- 423 (536)
..+|++..|+... .-..+....++..+.. -++..+++..-..... .+.+... ...+|...+|.++.+-+
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~----~~~~~FiW~~~~~~~~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~ 351 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALES----LQGVTFLWKYRPDDSIYFPEGLPNR-GRGNVVLSKWAPQNDLLLD 351 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHh----CCCceEEEEecCCcchhhhhcCCCC-CcCceEEecCCCcHHHhcC
Confidence 3577777776542 2234555666666652 2456667765543211 1212111 23479989999876544
Q ss_pred HhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHH
Q 036427 424 MGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 424 l~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m 499 (536)
-....++|+++|-++++|++.+|+|+|+.|..++|.. |+..+++.|.+.+.. +...+.+++..+++ ++++.+..
T Consensus 352 H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~-Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~-~~~y~~~~ 429 (496)
T KOG1192|consen 352 HPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPL-NARLLVRHGGGGVLDKRDLVSEELLEAIKEILE-NEEYKEAA 429 (496)
T ss_pred CCcCcEEEECCcccHHHHHHhcCCceecCCccccchh-HHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHc-ChHHHHHH
Confidence 2335689999998888999999999999999988876 999999998877653 23338999999999 88888877
Q ss_pred HHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 500 SQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 500 ~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
.+.+.... ++... ..+..+.+...+
T Consensus 430 ~~l~~~~~~~p~~~-~~~~~~~e~~~~ 455 (496)
T KOG1192|consen 430 KRLSEILRDQPISP-ELAVKWVEFVAR 455 (496)
T ss_pred HHHHHHHHcCCCCH-HHHHHHHHHHHh
Confidence 77776644 33444 555544454444
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00087 Score=69.52 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=61.1
Q ss_pred CEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HH--HHHHHcC-CCCCCEEEecCh--hhHHH
Q 036427 351 PAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK-KL--ANKLLST-DWKIPVQVKGFV--SKMEE 422 (536)
Q Consensus 351 ~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l--~~~l~~~-~~~~~V~~~G~v--~~l~~ 422 (536)
++| +..|++...|.. .+.+.++++.+. ..+.++++++|.++ +. .+.+.+. .....+.+.|.. .++..
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~-----~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQ-----ARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHH-----HCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 444 445554444443 455666666664 23566666666554 22 2334332 112235566754 69999
Q ss_pred HHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCc
Q 036427 423 AMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 423 ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~ 457 (536)
+++.||++|+.- |++ .=|.|+|+|+|+.=.+++
T Consensus 259 li~~a~l~v~nDSGp~--HlAaA~g~P~v~lfGpt~ 292 (352)
T PRK10422 259 LIDHAQLFIGVDSAPA--HIAAAVNTPLICLFGATD 292 (352)
T ss_pred HHHhCCEEEecCCHHH--HHHHHcCCCEEEEECCCC
Confidence 999999999874 644 448899999999865544
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00096 Score=71.82 Aligned_cols=101 Identities=15% Similarity=0.066 Sum_probs=66.8
Q ss_pred hHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCc----cccCChhhHhhCCceeecC-------CHHHHHH
Q 036427 419 KMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAG----QEAGNVPYVVENGCGKFSK-------SPKEIAN 483 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~----~e~~na~~lv~~g~g~~~~-------d~~~La~ 483 (536)
+..+++..||+.|.|| .|.|.+|+.++|+|.|.++..+- ++... .-...|+-++-. ..++|++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~--~~~~~GV~VvdR~~~n~~e~v~~la~ 539 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE--DPEEYGVYVVDRRDKNYDESVNQLAD 539 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS---HHGGGTEEEE-SSSS-HHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc--cCcCCcEEEEeCCCCCHHHHHHHHHH
Confidence 6899999999999999 47999999999999999997542 11100 011223322222 3567777
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 484 MVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 484 ~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
.|..+..+++..+..++.++.++++...|.+....+.+
T Consensus 540 ~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 540 FLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 78888776788888999999999988888776665544
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.1e-05 Score=69.82 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=75.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh-ccccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH-GPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~~~ 223 (536)
..|+|.+.+. |....+..|+++|++++| ++.|+++..... ++....+. ++.....+ .+-
T Consensus 22 ~~iWiHa~Sv--GE~~a~~~Li~~l~~~~p-~~~illT~~T~t-----------g~~~~~~~~~~~v~~~~-~P~----- 81 (186)
T PF04413_consen 22 PLIWIHAASV--GEVNAARPLIKRLRKQRP-DLRILLTTTTPT-----------GREMARKLLPDRVDVQY-LPL----- 81 (186)
T ss_dssp T-EEEE-SSH--HHHHHHHHHHHHHTT----TS-EEEEES-CC-----------HHHHHHGG-GGG-SEEE---------
T ss_pred CcEEEEECCH--HHHHHHHHHHHHHHHhCC-CCeEEEEecCCc-----------hHHHHHHhCCCCeEEEE-eCc-----
Confidence 6799998887 999999999999999876 577777654221 12111111 11011111 100
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCc-ccchHHHHHHHHcCCCCCceEEEEecCCCCc---cc-------cccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHP-LMQHVPLRILRAKGLLKKIVFTTVITDLSTC---HP-------TWFH 292 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~-~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~---~~-------~~~~ 292 (536)
. ....+.++++..+||+++.... .+-.+ +..+++.| +|++.+-.-++.. .. +.+.
T Consensus 82 ------D---~~~~~~rfl~~~~P~~~i~~EtElWPnl-l~~a~~~~----ip~~LvNarls~~s~~~~~~~~~~~r~~l 147 (186)
T PF04413_consen 82 ------D---FPWAVRRFLDHWRPDLLIWVETELWPNL-LREAKRRG----IPVVLVNARLSERSFRRYRRFPFLFRPLL 147 (186)
T ss_dssp ------S---SHHHHHHHHHHH--SEEEEES----HHH-HHH---------S-EEEEEE--------------HHHHHHG
T ss_pred ------c---CHHHHHHHHHHhCCCEEEEEccccCHHH-HHHHhhcC----CCEEEEeeeeccccchhhhhhHHHHHHHH
Confidence 0 1135667899999999987653 22221 33445455 8887665433321 11 2234
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCC
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLP 325 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignp 325 (536)
+.+|.+++.++..++.+.+.|++++++.++||.
T Consensus 148 ~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gnl 180 (186)
T PF04413_consen 148 SRFDRILAQSEADAERFRKLGAPPERVHVTGNL 180 (186)
T ss_dssp GG-SEEEESSHHHHHHHHTTT-S--SEEE---G
T ss_pred HhCCEEEECCHHHHHHHHHcCCCcceEEEeCcc
Confidence 678999999999999999999999999999984
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0057 Score=62.57 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=61.4
Q ss_pred CCEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHHH
Q 036427 350 LPAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEEA 423 (536)
Q Consensus 350 ~~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~l 423 (536)
.+++ +..|++...+.. .+.+.++++.+. ..+.+++++.|... +..+.+.+. ...+.+.|.. .++..+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~-----~~~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLA-----PSGLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHH-----HCCCeEEEeCCCHHHHHHHHHHHcc--CCcceecCCCCHHHHHHH
Confidence 3454 455555443433 455666666664 23455555445332 233444432 2346666754 599999
Q ss_pred HhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCcc
Q 036427 424 MGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 424 l~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~~ 458 (536)
++.||++|+.- |++ .=|.|+|+|+|+.=.++++
T Consensus 251 i~~a~l~I~nDSGp~--HlA~A~g~p~valfGpt~p 284 (322)
T PRK10964 251 LAGAKAVVSVDTGLS--HLTAALDRPNITLYGPTDP 284 (322)
T ss_pred HHhCCEEEecCCcHH--HHHHHhCCCEEEEECCCCc
Confidence 99999999874 644 4599999999998765543
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0024 Score=65.18 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=71.6
Q ss_pred CCCEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHH
Q 036427 349 DLPAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEE 422 (536)
Q Consensus 349 ~~~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~ 422 (536)
+.+.| +..|++...+.. .+.+.++++.+. +.+..++++.|... +..+.+.+. . .+..+.|.. .++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~-----~~~~~~vl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLL-----ARGLQIVLPWGNDAEKQRAERIAEA-L-PGAVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHH-----HCCCeEEEeCCCHHHHHHHHHHHhh-C-CCCeecCCCCHHHHHH
Confidence 34444 455555444443 355666666664 12455555545332 223334332 1 123456654 58999
Q ss_pred HHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCcccc----CChhhHhhCCceeecC--CHHHHHHHHHHHh
Q 036427 423 AMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAGQEA----GNVPYVVENGCGKFSK--SPKEIANMVSQWF 489 (536)
Q Consensus 423 ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~~e~----~na~~lv~~g~g~~~~--d~~~La~~I~~ll 489 (536)
+++.||++|+.- |++ .=|.++|+|+|+.-.+++... +....++... -+. +++++.++++++|
T Consensus 251 li~~a~l~I~~DSgp~--HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~---~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LLAGADAVVGVDTGLT--HLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGE---SGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHcCCEEEeCCChHH--HHHHHcCCCEEEEECCCCHhhcccCCCCceEEccC---ccCCCCHHHHHHHHHhhC
Confidence 999999999874 644 448899999998765443221 0001111111 022 7888888887764
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0021 Score=66.26 Aligned_cols=268 Identities=16% Similarity=0.113 Sum_probs=128.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
+||||++..+. -|.......+...|++.+|+ +++.++..... ..+.+..|-........... +
T Consensus 1 ~~kIliir~~~-iGD~vlt~p~~~~lk~~~P~-a~i~~~~~~~~-------------~~i~~~~p~I~~vi~~~~~~--~ 63 (334)
T COG0859 1 MMKILVIRLSK-LGDVVLTLPLLRTLKKAYPN-AKIDVLVPKGF-------------APILKLNPEIDKVIIIDKKK--K 63 (334)
T ss_pred CceEEEEeccc-hhHHHhHHHHHHHHHHHCCC-CEEEEEeccch-------------HHHHhcChHhhhhccccccc--c
Confidence 58999998764 59999999999999999884 66654422110 00111111111111000000 0
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCC-CcccccccccCCEEEEc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
+ ........+.+.+++.++|+|+.....+.. ..+....+ +|.. -+.+... ......+... .-...
T Consensus 64 ~-----~~~~~~~~l~~~lr~~~yD~vidl~~~~ks--a~l~~~~~----~~~r~g~~~~~~r~~~~~~~~~~--~~~~~ 130 (334)
T COG0859 64 G-----LGLKERLALLRTLRKERYDAVIDLQGLLKS--ALLALLLG----IPFRIGFDKKSARELLLNKFYPR--LDKPE 130 (334)
T ss_pred c-----cchHHHHHHHHHhhccCCCEEEECcccHHH--HHHHHHhC----CCcccccccccchhHHHHHhhhc--cCccc
Confidence 0 112233477788999999999987654322 12222222 2321 1110000 0000111111 11223
Q ss_pred CHHHHHHHHHh----CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecC-CCC-CCc-HHHHHHHHHH
Q 036427 302 TADVAKRAMKA----GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGG-GEG-MGP-IEATARALGN 374 (536)
Q Consensus 302 S~~~~~~l~~~----g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg-~~g-~k~-~~~~l~al~~ 374 (536)
.+...+.+... +..... .....+.......+....+.-.. ++++++..| +.+ .+. ..+.+..+++
T Consensus 131 ~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~pg~s~~~~K~wp~e~~~~l~~ 202 (334)
T COG0859 131 GQHVVERYLALLEDLGLYPPP-------EPQLDFPLPRPPIELAKNLAKFD-RPYIVINPGASRGSAKRWPLEHYAELAE 202 (334)
T ss_pred chhHHHHHHHHHHHhcCCCCC-------CCccCcccccCHHHHHHHHHhcC-CCeEEEeccccccccCCCCHHHHHHHHH
Confidence 44444444332 222111 11111211111222222111111 466666555 442 333 3466777777
Q ss_pred HhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC-ChHHHHHHHHhCCcEE
Q 036427 375 ALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-GPGTIAEAMIRGLPII 450 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-G~~tllEAma~GlPVI 450 (536)
.+.+ ...++++..|..+ +..+.+.+. ....+.+.|.. .++..++..||++|+.- |++ .=|.|.|+|+|
T Consensus 203 ~l~~-----~~~~Vvl~g~~~e~e~~~~i~~~-~~~~~~l~~k~sL~e~~~li~~a~l~I~~DSg~~--HlAaA~~~P~I 274 (334)
T COG0859 203 LLIA-----KGYQVVLFGGPDEEERAEEIAKG-LPNAVILAGKTSLEELAALIAGADLVIGNDSGPM--HLAAALGTPTI 274 (334)
T ss_pred HHHH-----CCCEEEEecChHHHHHHHHHHHh-cCCccccCCCCCHHHHHHHHhcCCEEEccCChHH--HHHHHcCCCEE
Confidence 7763 3355444444422 222333321 11122255654 69999999999999874 544 34999999999
Q ss_pred EeccCCc
Q 036427 451 LNDFIAG 457 (536)
Q Consensus 451 ~~~~~~~ 457 (536)
++-....
T Consensus 275 ~iyg~t~ 281 (334)
T COG0859 275 ALYGPTS 281 (334)
T ss_pred EEECCCC
Confidence 9876543
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0035 Score=67.36 Aligned_cols=264 Identities=14% Similarity=0.132 Sum_probs=136.0
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
.-|+|.+++.-+..+|..+ ++.+ ++.++..+.|- +.. +.+ ..+ .-.+|.|-..+...++.++..
T Consensus 141 ~~D~VWVhDYhL~llP~~L-R~~~--~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~ 217 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQML-RERG--PDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCK 217 (474)
T ss_dssp TT-EEEEESGGGTTHHHHH-HHTT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcHHHHHHHH-Hhhc--CCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHH
Confidence 3478888887666667654 4443 23566555442 211 122 111 236788888888888876542
Q ss_pred ---CCC--CC-----------CEEEeCCCCCCCCCCC-----C--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 313 ---GLQ--AS-----------QIKVYGLPVRPSFVKP-----V--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 313 ---g~~--~~-----------ki~vignpv~~~~~~~-----~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
|+. .. ++.+.+.+++++.+.. . ...++++++++ .+.++|+-+-+....|++..-+
T Consensus 218 r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvDrld~~kGi~~kl 295 (474)
T PF00982_consen 218 RLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVDRLDYTKGIPEKL 295 (474)
T ss_dssp HHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE--B-GGG-HHHHH
T ss_pred HHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEeccchhhcCHHHHH
Confidence 221 11 2445555666654421 1 11234555553 2236666666666667777767
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecC-----CH---HHHHHHHcC-----------CCCCCEEEecC-h--hhHHHHHhhc
Q 036427 370 RALGNALYDENLGEPIGQVLVICGR-----NK---KLANKLLST-----------DWKIPVQVKGF-V--SKMEEAMGAC 427 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~-----~~---~l~~~l~~~-----------~~~~~V~~~G~-v--~~l~~ll~~a 427 (536)
.++.+-|.+-......+.+ +.++. .+ ++++++.+. ++ .+|.++.. + +++..+|+.|
T Consensus 296 ~Afe~fL~~~P~~~~kv~l-iQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~-~PI~~~~~~~~~~~~~aly~~a 373 (474)
T PF00982_consen 296 RAFERFLERYPEYRGKVVL-IQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDW-TPIIYIYRSLSFEELLALYRAA 373 (474)
T ss_dssp HHHHHHHHH-GGGTTTEEE-EEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB--SEEEE-S---HHHHHHHHHH-
T ss_pred HHHHHHHHhCcCccCcEEE-EEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCc-eeEEEEecCCCHHHHHHHHHhh
Confidence 6666555431111223333 33221 11 233333221 22 24655543 3 5899999999
Q ss_pred CeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCce-eecC--CHHHHHHHHHHHhCCCHHHH
Q 036427 428 DCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCG-KFSK--SPKEIANMVSQWFGPKIDEL 496 (536)
Q Consensus 428 Dv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g-~~~~--d~~~La~~I~~ll~~d~~~~ 496 (536)
|+++.+| | -++..|+.+|..+ +|++... .+. ...+.| ..++ |.++++++|.+.|+|.++.|
T Consensus 374 Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefa------Gaa--~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er 445 (474)
T PF00982_consen 374 DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFA------GAA--EQLSEAALLVNPWDIEEVADAIHEALTMPPEER 445 (474)
T ss_dssp SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTB------GGG--GT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHH
T ss_pred hhEEecchhhccCCcceEEEEEecCCCCceEeeccC------CHH--HHcCCccEEECCCChHHHHHHHHHHHcCCHHHH
Confidence 9988887 6 6788999999876 3333321 121 222322 4554 99999999999999888888
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 497 KAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 497 ~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+...+.-++....+...+.++.+++-++
T Consensus 446 ~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 446 KERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp HHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 8888888888888888888888877665
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.01 Score=59.33 Aligned_cols=86 Identities=19% Similarity=0.237 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIA 440 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tll 440 (536)
.+.+.++++.+.+ .+.+++++.+..+ +..+.+.+. +....+.+.|.. .++..+++.||++|+. ||+ +.
T Consensus 139 ~~~~~~l~~~l~~-----~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Dsg~--~H 211 (279)
T cd03789 139 AERFAALADRLLA-----RGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDSGP--MH 211 (279)
T ss_pred HHHHHHHHHHHHH-----CCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCCHH--HH
Confidence 3455666666542 2566665554433 233333332 112234455553 6899999999999998 453 34
Q ss_pred HHHHhCCcEEEeccCCcc
Q 036427 441 EAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~ 458 (536)
-|.++|+|+|+.-.....
T Consensus 212 lA~a~~~p~i~l~g~~~~ 229 (279)
T cd03789 212 LAAALGTPTVALFGPTDP 229 (279)
T ss_pred HHHHcCCCEEEEECCCCc
Confidence 478999999998765443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0064 Score=64.83 Aligned_cols=268 Identities=12% Similarity=0.075 Sum_probs=151.9
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.+|..-+..+|.. +++++. +.++..++| -+.. ..| ..+ .-.+|.|-..+....+.+.
T Consensus 119 ~~~~~~D~VWVHDYhL~llp~~-LR~~~~--~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl 195 (474)
T PRK10117 119 PLLKDDDIIWIHDYHLLPFASE-LRKRGV--NNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFL 195 (474)
T ss_pred HhcCCCCEEEEeccHhhHHHHH-HHHhCC--CCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHH
Confidence 33444 6888887766555554 444443 234444443 2211 111 111 1256777777777777665
Q ss_pred Hh-----CCCC------------CCEEEeCCCCCCCCCCCCC------chHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 311 KA-----GLQA------------SQIKVYGLPVRPSFVKPVR------PKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 311 ~~-----g~~~------------~ki~vignpv~~~~~~~~~------~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.. |+.. -++.+.|.++|++.+.... ...++++.++ ++++|+-+-+....|++.+
T Consensus 196 ~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~~lilgVDRLDytKGi~~ 272 (474)
T PRK10117 196 DCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPE 272 (474)
T ss_pred HHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CCeEEEEecccccccCHHH
Confidence 41 2211 0234455666765442110 1123454543 4556666666666688877
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCC-----H---HHHHHHHcC--------CC--CCCEEEecC-h--hhHHHHHhh
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRN-----K---KLANKLLST--------DW--KIPVQVKGF-V--SKMEEAMGA 426 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~---~l~~~l~~~--------~~--~~~V~~~G~-v--~~l~~ll~~ 426 (536)
-+.++...|..-.....++.+ +.+... + ++++++.+. +- -.+|.++.. + +++..+|+.
T Consensus 273 rl~Afe~fL~~~Pe~~gkvvl-vQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ 351 (474)
T PRK10117 273 RFLAYEALLEKYPQHHGKIRY-TQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 351 (474)
T ss_pred HHHHHHHHHHhChhhcCCEEE-EEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHh
Confidence 777776655421111122223 322221 1 233333322 10 123544332 2 478899999
Q ss_pred cCeEEECC---C-hHHHHHHHHhCCc-----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHH
Q 036427 427 CDCIITKA---G-PGTIAEAMIRGLP-----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDE 495 (536)
Q Consensus 427 aDv~V~~s---G-~~tllEAma~GlP-----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~ 495 (536)
||+++..+ | -++.-|+.+|-.| .|.+.. .|.+..| +...+++ |.++++++|.+.|+|.++.
T Consensus 352 ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef-----AGaA~~L---~~AllVNP~d~~~~A~Ai~~AL~Mp~~E 423 (474)
T PRK10117 352 SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF-----AGAANEL---TSALIVNPYDRDEVAAALDRALTMPLAE 423 (474)
T ss_pred ccEEEecccccccccccchheeeecCCCCccEEEecc-----cchHHHh---CCCeEECCCCHHHHHHHHHHHHcCCHHH
Confidence 99988877 5 5677899999763 444432 2233334 2355665 9999999999999988888
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 496 LKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 496 ~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|++-.+.-++....+...+.++..++.++.
T Consensus 424 r~~R~~~l~~~v~~~dv~~W~~~fL~~L~~ 453 (474)
T PRK10117 424 RISRHAEMLDVIVKNDINHWQECFISDLKQ 453 (474)
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence 888778888888888888888777665543
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00026 Score=62.27 Aligned_cols=100 Identities=16% Similarity=0.294 Sum_probs=66.9
Q ss_pred cEEEEEecCCH----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC---Ccc
Q 036427 386 GQVLVICGRNK----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI---AGQ 458 (536)
Q Consensus 386 ~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~---~~~ 458 (536)
.++++..|++. +-.+... ....-.|....|.+.+.+.++.||++|.++|.++++|-+..|+|.|+.... +++
T Consensus 37 ~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNH 115 (170)
T KOG3349|consen 37 TKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNH 115 (170)
T ss_pred cEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhH
Confidence 46678889883 2222222 111223444445689999999999999999999999999999999998764 345
Q ss_pred ccCChhhHhhCCceeecCCHHHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSKSPKEIANMVSQ 487 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~d~~~La~~I~~ 487 (536)
|..-|.-+.+.|.-+.+. +.++.+.++.
T Consensus 116 Q~ELA~qL~~egyL~~C~-ps~L~~~L~~ 143 (170)
T KOG3349|consen 116 QLELAKQLAEEGYLYYCT-PSTLPAGLAK 143 (170)
T ss_pred HHHHHHHHHhcCcEEEee-ccchHHHHHh
Confidence 544566677777655553 3334444433
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00044 Score=63.82 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=47.4
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHc---CCCCCceEEEEec-----CCCCcccccccccCCEEEEcCHHHHH
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAK---GLLKKIVFTTVIT-----DLSTCHPTWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~-----d~~~~~~~~~~~~~d~vi~~S~~~~~ 307 (536)
.....++.+.+||+|++++|........+++.. +.. +.+++++.. ..+ ...+.+++.+|.+++..++.++
T Consensus 82 ~~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~-~~kiIyIES~aRv~~lS-lTGklly~~aD~f~VQW~~l~~ 159 (170)
T PF08660_consen 82 LQSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLR-GSKIIYIESFARVKTLS-LTGKLLYPFADRFIVQWEELAE 159 (170)
T ss_pred HHHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhcc-CCcEEEEEeeeecCCCc-hHHHHHHHhCCEEEEcCHHHHh
Confidence 355567788999999999987654434444443 221 145444432 222 3457788999999999999887
Q ss_pred HH
Q 036427 308 RA 309 (536)
Q Consensus 308 ~l 309 (536)
.+
T Consensus 160 ~y 161 (170)
T PF08660_consen 160 KY 161 (170)
T ss_pred HC
Confidence 63
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0079 Score=62.13 Aligned_cols=101 Identities=14% Similarity=0.038 Sum_probs=59.3
Q ss_pred CCEEEE-ecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCC-CEEEecCh--hhHH
Q 036427 350 LPAVLL-MGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKI-PVQVKGFV--SKME 421 (536)
Q Consensus 350 ~~~il~-~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~-~V~~~G~v--~~l~ 421 (536)
.+.|++ .|+....+.. .+.+.++++.+. ..+..+++++|..+ +..+.+.+..... -+.+.|.. .++.
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~-----~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ 255 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALH-----ARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLA 255 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHH-----hCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHH
Confidence 345544 4443333332 455566666554 23456666655442 2234444321122 24466754 5999
Q ss_pred HHHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCc
Q 036427 422 EAMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 422 ~ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~ 457 (536)
.+++.||++|+.- |++ .=|.|+|+|+|+.-.+.+
T Consensus 256 ali~~a~l~Vs~DSGp~--HlAaA~g~p~v~Lfgpt~ 290 (344)
T TIGR02201 256 ALIDHARLFIGVDSVPM--HMAAALGTPLVALFGPSK 290 (344)
T ss_pred HHHHhCCEEEecCCHHH--HHHHHcCCCEEEEECCCC
Confidence 9999999999874 544 449999999999865433
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.033 Score=64.16 Aligned_cols=264 Identities=15% Similarity=0.133 Sum_probs=148.5
Q ss_pred HHhhCC--CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHH
Q 036427 242 LMKYQP--DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKR 308 (536)
Q Consensus 242 l~~~kP--DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~ 308 (536)
.+..+| |+|.+|..-+..+|..+ +++. ++.++..+.|- +.. ..| ..+ .-.+|.|=..+...++.
T Consensus 195 ~~~~~~~~d~VWVhDYhL~llP~~L-R~~~--~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~ 271 (854)
T PLN02205 195 MEVINPEDDFVWIHDYHLMVLPTFL-RKRF--NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARH 271 (854)
T ss_pred HHHhCCCCCEEEEeCchhhHHHHHH-HhhC--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHH
Confidence 334456 79998887776667654 4332 23455444442 211 111 011 23578887888887777
Q ss_pred HHH-----hCCCCC---------------CEEEeCCCCCCCCCCCCC-------chHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 309 AMK-----AGLQAS---------------QIKVYGLPVRPSFVKPVR-------PKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 309 l~~-----~g~~~~---------------ki~vignpv~~~~~~~~~-------~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
++. .|+... ++.+.+.++++..+.... ...+++++++- +++++++-+-+...
T Consensus 272 Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVDrlD~ 350 (854)
T PLN02205 272 FLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVDDMDI 350 (854)
T ss_pred HHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEccCccc
Confidence 654 233211 233455566665432111 11244545431 23455655555555
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcE---EEEEecC-----CH---HHHHHHHcC--------CC--CCCEEEecC-h--
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQ---VLVICGR-----NK---KLANKLLST--------DW--KIPVQVKGF-V-- 417 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~---~lvi~G~-----~~---~l~~~l~~~--------~~--~~~V~~~G~-v-- 417 (536)
.|++..-+.++.+.|.+ +|.++ .++.+.. .+ ++++++.+. +- -.+|+++.. +
T Consensus 351 ~KGi~~kl~A~e~~L~~----~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~ 426 (854)
T PLN02205 351 FKGISLKLLAMEQLLMQ----HPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKF 426 (854)
T ss_pred ccCHHHHHHHHHHHHHh----CccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCH
Confidence 68887777777666652 44431 2332221 12 222222221 10 124666543 2
Q ss_pred hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc-------------------EEEeccCCccccCChhhHhhCCceee
Q 036427 418 SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP-------------------IILNDFIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP-------------------VI~~~~~~~~e~~na~~lv~~g~g~~ 474 (536)
+++..+|+.||+++..+ | -++..|+.+|..+ +|++.. .|.+..| +..+.
T Consensus 427 ~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf-----aGaa~~L---~~Ai~ 498 (854)
T PLN02205 427 YERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF-----IGCSPSL---SGAIR 498 (854)
T ss_pred HHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeec-----cchhHHh---CcCeE
Confidence 58899999999988887 5 5688899988642 233221 2233333 22455
Q ss_pred cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 475 SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 475 ~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
++ |.++++++|.+.|+|.++.++.-.+.-+++...+.....++..+.
T Consensus 499 VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~ 547 (854)
T PLN02205 499 VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQ 547 (854)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 55 999999999999998777777666677777777777776665544
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.025 Score=56.40 Aligned_cols=254 Identities=14% Similarity=0.081 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE--ecCCCCcc-----------cccccccCCEEEE
Q 036427 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV--ITDLSTCH-----------PTWFHKLVTRCYC 300 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~--~~d~~~~~-----------~~~~~~~~d~vi~ 300 (536)
+++.+....+..+-+-+++|+-+-..+ ..+-..|....-.++.+ ..|+.... ++...+.+..+++
T Consensus 27 la~avi~~a~~~r~~rff~HGqFn~~l--wlall~g~~~~~q~yWhiWGaDLYe~~~~lk~rlfy~lRR~aq~rvg~v~a 104 (322)
T PRK02797 27 LAEAVIAKAKANRAQRFFLHGQFNPTL--WLALLSGKIKPKQFYWHIWGADLYEESKGLKFRLFYPLRRLAQKRVGHVFA 104 (322)
T ss_pred HHHHHHHHHhhCccceEEEecCCCHHH--HHHHHhCCcCccceEEEEEChhhhhcccchhHHHHHHHHHHHHhhcCeEEE
Confidence 344555556667788888888664332 22222332221223333 33543111 1223456678888
Q ss_pred cCHHHHHH-HHH-hCCCCCCEEEeCCCCC--CCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHH
Q 036427 301 PTADVAKR-AMK-AGLQASQIKVYGLPVR--PSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNA 375 (536)
Q Consensus 301 ~S~~~~~~-l~~-~g~~~~ki~vignpv~--~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~ 375 (536)
....... ..+ ++++. +. .+.|.. +.......+ -.+..+..+.+|-+... .+..+++.++.+.
T Consensus 105 -trGD~~~~a~~~~~v~~-~l--lyfpt~m~~~l~~~~~~---------~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~ 171 (322)
T PRK02797 105 -TRGDLSYFAQRHPKVPG-SL--LYFPTRMDPSLNTMAND---------RQRAGKMTILVGNSGDRSNRHIEALRALHQQ 171 (322)
T ss_pred -ecchHHHHHHhcCCCCc-cE--EecCCcchhhhcccccc---------ccCCCceEEEEeCCCCCcccHHHHHHHHHHH
Confidence 4444444 333 35543 33 333322 221111110 01223455567776554 3345666666655
Q ss_pred hhhcccCCCCcEEEEEecC--C-HHHHHHHHc----CCCCCCEEEecC-h--hhHHHHHhhcCeEEECC----ChHHHHH
Q 036427 376 LYDENLGEPIGQVLVICGR--N-KKLANKLLS----TDWKIPVQVKGF-V--SKMEEAMGACDCIITKA----GPGTIAE 441 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~--~-~~l~~~l~~----~~~~~~V~~~G~-v--~~l~~ll~~aDv~V~~s----G~~tllE 441 (536)
. ..++++++..|- + +++.+++.+ +-..++++.+-. . ++..++++.||+.+..- |-+|++-
T Consensus 172 ~------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l 245 (322)
T PRK02797 172 F------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL 245 (322)
T ss_pred h------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH
Confidence 4 456777776665 3 344444433 222256666543 3 58899999999988764 5678899
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
.+.+|+||+......- -..+.+.|+-++.. |...+.++ .++|...-++... +..+..++
T Consensus 246 Li~~G~~v~l~r~n~f-----wqdl~e~gv~Vlf~~d~L~~~~v~e~-----------~rql~~~dk~~I~-Ff~pn~~~ 308 (322)
T PRK02797 246 LIQLGKPVVLSRDNPF-----WQDLTEQGLPVLFTGDDLDEDIVREA-----------QRQLASVDKNIIA-FFSPNYLQ 308 (322)
T ss_pred HHHCCCcEEEecCCch-----HHHHHhCCCeEEecCCcccHHHHHHH-----------HHHHHhhCcceee-ecCHhHHH
Confidence 9999999999875432 23378888877653 22222221 1222222222222 67777777
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.|.++++.
T Consensus 309 ~W~~~l~~ 316 (322)
T PRK02797 309 GWRNALAI 316 (322)
T ss_pred HHHHHHHH
Confidence 77777754
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0099 Score=60.50 Aligned_cols=302 Identities=13% Similarity=0.119 Sum_probs=156.9
Q ss_pred CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhh
Q 036427 152 SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATS 231 (536)
Q Consensus 152 ~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
++-++|+...-+-+.++|... |++++..+.... |...... .......... ++.
T Consensus 10 ~~y~~~~~~~~~~~~~~l~~~---g~kvlflE~~~~---~~~k~rd-----~~~~~~~~~~-~~~--------------- 62 (373)
T COG4641 10 SDYNNGSAEYYRGLLRALKMD---GMKVLFLESGDF---WDYKNRD-----IDAEDGCTEA-FYK--------------- 62 (373)
T ss_pred hhhcCCchhhHHHHHHHHHhc---cceEEEEecccH---Hhhhccc-----ccCccchhhe-eec---------------
Confidence 444578888888899999998 899977653221 0000000 0000000000 000
Q ss_pred HHHHHHHHHHHHhhCCCEEEEcCcc-----cchHHHHHHHHcCCCCCceEEEEecCCC-Cccc--cc----cc----ccC
Q 036427 232 TFIAREVAKGLMKYQPDIIISVHPL-----MQHVPLRILRAKGLLKKIVFTTVITDLS-TCHP--TW----FH----KLV 295 (536)
Q Consensus 232 ~~~~~~l~~~l~~~kPDvVi~~~~~-----~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~--~~----~~----~~~ 295 (536)
..........++.++||+|++.... ... +..++. .+.. .+|++++.++.. +.+. .+ +. -..
T Consensus 63 ~~~e~~~~~~i~~fk~d~iv~~~~~~~~~~~~~-~~~~a~-l~~~-~l~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~f 139 (373)
T COG4641 63 DQPELESLLYIREFKPDIIVNMSGDDQPDEEST-IDLWAW-LKRK-CLPVIVWYTEDPYDTDIFSQVAEEQLARRPLFIF 139 (373)
T ss_pred CcHHHHHHHHHHhcCCcEEEEecccccccceeh-HHHHHH-hhcC-CcceEEEEeccchhhhhhhhhhHHHhhccccchh
Confidence 0111233456889999999986532 111 122222 2222 377655544322 1110 11 11 122
Q ss_pred CEEEEcCHHH-HHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH-
Q 036427 296 TRCYCPTADV-AKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG- 373 (536)
Q Consensus 296 d~vi~~S~~~-~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~- 373 (536)
|.|+..++.. ++.+.+.+. ..+...++.+++++.+.+..+..... --+.++|.... ...+.++.+.
T Consensus 140 d~v~~~g~~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~i~~da~~~---------~dL~~ign~~p--Dr~e~~ke~~~ 207 (373)
T COG4641 140 DNVLSFGGGLVANKYYQEGG-ARNCYYLPWAVDDSLFHPIPPDASYD---------VDLNLIGNPYP--DRVEEIKEFFV 207 (373)
T ss_pred hhhhhccchHHHHHHHHhhc-ccceeccCccCCchhcccCCccccce---------eeeEEecCCCc--cHHHHHHHHhh
Confidence 3344334443 455554333 34567788888888776654322111 12334444322 2233333332
Q ss_pred HHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh---hhHHHHHhhcCeEEECC-------C---hHHHH
Q 036427 374 NALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV---SKMEEAMGACDCIITKA-------G---PGTIA 440 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~s-------G---~~tll 440 (536)
+-.. .....+-+...|.. +...+....+.+++..+|+. +.+...++.-|+.+.-+ + .+-+.
T Consensus 208 ~ps~----kl~v~rr~~~~g~~--y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 208 EPSF----KLMVDRRFYVLGPR--YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred ccch----hhhccceeeecCCc--cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 1111 01111222334443 22223333355577777776 35666777777755432 2 56789
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCce-eecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCG-KFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g-~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
|+++||.|.|.....+ .+-+...|.- ++..|.+++.++++.++. .++.|+++++++.+.+.
T Consensus 282 eiagc~~~liT~~~~~------~e~~f~pgk~~iv~~d~kdl~~~~~yll~-h~~erkeiae~~ye~V~ 343 (373)
T COG4641 282 EIAGCGGFLITDYWKD------LEKFFKPGKDIIVYQDSKDLKEKLKYLLN-HPDERKEIAECAYERVL 343 (373)
T ss_pred HHhhcCCccccccHHH------HHHhcCCchheEEecCHHHHHHHHHHHhc-CcchHHHHHHhhHHHHH
Confidence 9999999988866322 1223444443 345699999999999999 99999999999988653
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.062 Score=57.31 Aligned_cols=276 Identities=16% Similarity=0.163 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCC-----Cccccc---c--cccCCEEEEc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLS-----TCHPTW---F--HKLVTRCYCP 301 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~-----~~~~~~---~--~~~~d~vi~~ 301 (536)
.++.++.+..+.. |+|.++..-+.-+|-.+ +..+.. .+..+++| .+. .+.+.+ + .-.+|.+-..
T Consensus 136 ~FAd~i~~~~~~g--DiIWVhDYhL~L~P~ml-R~~~~~--~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFq 210 (486)
T COG0380 136 KFADKIVEIYEPG--DIIWVHDYHLLLVPQML-RERIPD--AKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQ 210 (486)
T ss_pred HHHHHHHHhcCCC--CEEEEEechhhhhHHHH-HHhCCC--ceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEec
Confidence 3444444433332 88888876665555543 433322 23333333 221 122211 1 1245666667
Q ss_pred CHHHHHHHHHh-----C------C-------CCCCEEEeCCCCCCCCCCCC----C---chHHHHHHcCCCCCCCEEEEe
Q 036427 302 TADVAKRAMKA-----G------L-------QASQIKVYGLPVRPSFVKPV----R---PKVELRRELGMDEDLPAVLLM 356 (536)
Q Consensus 302 S~~~~~~l~~~-----g------~-------~~~ki~vignpv~~~~~~~~----~---~~~~~r~~lgi~~~~~~il~~ 356 (536)
++..++.+... + + ...++...+.++|+..+... . .-.++++.++ .++++|+.+
T Consensus 211 t~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgv 288 (486)
T COG0380 211 TESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGV 288 (486)
T ss_pred CHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEe
Confidence 77766665431 1 0 01234456667776554321 1 1234555543 335666666
Q ss_pred cCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----HH---HHHHHHcC-----------CCCCCEEEecC-
Q 036427 357 GGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-----KK---LANKLLST-----------DWKIPVQVKGF- 416 (536)
Q Consensus 357 gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~~---l~~~l~~~-----------~~~~~V~~~G~- 416 (536)
-+....+++.+-+.++.+.+.+-.....++. ++..... ++ +...++.. ++ .+|.++-.
T Consensus 289 DRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvv-liQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~-~Pv~~l~~~ 366 (486)
T COG0380 289 DRLDYSKGIPQRLLAFERLLEEYPEWRGKVV-LLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSW-TPVHYLHRD 366 (486)
T ss_pred hhcccccCcHHHHHHHHHHHHhChhhhCceE-EEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCc-ceeEEEecc
Confidence 6665567777766766665542111112222 3333321 12 22222211 22 34555544
Q ss_pred h--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHH
Q 036427 417 V--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANM 484 (536)
Q Consensus 417 v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~ 484 (536)
+ +++..+|..||+.+..+ | -++..|+.+|-- |.|.+.. .|.+..|.+ ..+++ |.++++++
T Consensus 367 ~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeF-----aGaa~~L~~---AliVNP~d~~~va~a 438 (486)
T COG0380 367 LDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEF-----AGAASELRD---ALIVNPWDTKEVADA 438 (486)
T ss_pred CCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEecc-----ccchhhhcc---CEeECCCChHHHHHH
Confidence 2 48899999999988877 5 678889888743 5555543 223333332 55665 99999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 485 VSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 485 I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|...|+|.++.+++--+.-.+....+.+.++++..++-+++
T Consensus 439 i~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 439 IKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999988888877777777778888888888887665554
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.045 Score=55.36 Aligned_cols=233 Identities=12% Similarity=0.038 Sum_probs=124.9
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE--ecCCCCccc-----------ccccccCCEEEEc
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV--ITDLSTCHP-----------TWFHKLVTRCYCP 301 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~--~~d~~~~~~-----------~~~~~~~d~vi~~ 301 (536)
+..+.+..+..+-+-++.|+-+-..+ .++-..|....-.++.+ ..|+..... +...+.+..|++.
T Consensus 67 a~avi~~a~~~r~~kff~HGqFn~~l--wlaLl~g~~~~~k~~WhIWGaDLYe~~~~~k~rlfy~lRr~aq~rvg~V~at 144 (360)
T PF07429_consen 67 AQAVIAKAKADRADKFFLHGQFNPWL--WLALLFGKIKLKKCYWHIWGADLYEDSRSLKFRLFYFLRRLAQKRVGHVFAT 144 (360)
T ss_pred HHHHHHHHhhCccceEEEeccCcHHH--HHHHHcCCccccceEEEEeCchhhccccccchhHHHHHHHHHHhhcCeEEEE
Confidence 34454555667888888888664332 22223342221233333 345432111 1123455567654
Q ss_pred CHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhhhc
Q 036427 302 TADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALYDE 379 (536)
Q Consensus 302 S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~~~ 379 (536)
+.....+.+ ++..+......|..+++........ ...+.+.-+.+|-+... .+..+.+.++.+..
T Consensus 145 -~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~---------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~--- 211 (360)
T PF07429_consen 145 -RGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN---------KKNKGKLTILVGNSGDPSNNHIEALEALKQQF--- 211 (360)
T ss_pred -cchHHHHHHHcCCCCceEEEcCCCCchhhhccccc---------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhc---
Confidence 444455554 4322333333444444432221110 11223445566776554 33556677776543
Q ss_pred ccCCCCcEEEEEecCC---HHHHHHHHcC----CCCCCEEEe-cCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHh
Q 036427 380 NLGEPIGQVLVICGRN---KKLANKLLST----DWKIPVQVK-GFV--SKMEEAMGACDCIITKA----GPGTIAEAMIR 445 (536)
Q Consensus 380 ~~~~~~~~~lvi~G~~---~~l~~~l~~~----~~~~~V~~~-G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~ 445 (536)
..+.++++-.|-+ +++.+++.+. -..+++.++ .+. ++.-++++.||+.+... |-++++-.+.+
T Consensus 212 ---~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~ 288 (360)
T PF07429_consen 212 ---GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQL 288 (360)
T ss_pred ---CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHc
Confidence 3456766655543 3455444432 223467654 455 58899999999999876 56789999999
Q ss_pred CCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhC
Q 036427 446 GLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFG 490 (536)
Q Consensus 446 GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~ 490 (536)
|+||+......- ...+.+.|.-++.. |...+.++=+++..
T Consensus 289 G~~v~L~~~np~-----~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 289 GKKVFLSRDNPF-----WQDLKEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred CCeEEEecCChH-----HHHHHhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 999999875332 33477777666553 44555444444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.03 Score=60.02 Aligned_cols=177 Identities=14% Similarity=0.100 Sum_probs=109.3
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEE----ecCCHHHHHHHHcCCCC-CCEEEe
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVI----CGRNKKLANKLLSTDWK-IPVQVK 414 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi----~G~~~~l~~~l~~~~~~-~~V~~~ 414 (536)
.|..++++++..++ ....- -.|-..+.+....+.++ +-|+..+++. +|+ ...+....+.++. ++|.|.
T Consensus 749 ~r~~y~Lp~d~vvf-~~FNq-LyKidP~~l~~W~~ILk----~VPnS~LwllrfPa~ge-~rf~ty~~~~Gl~p~riifs 821 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVF-CNFNQ-LYKIDPSTLQMWANILK----RVPNSVLWLLRFPAVGE-QRFRTYAEQLGLEPDRIIFS 821 (966)
T ss_pred CCCCCCCCCCeEEE-eechh-hhcCCHHHHHHHHHHHH----hCCcceeEEEeccccch-HHHHHHHHHhCCCccceeec
Confidence 45678898875332 22221 12333455555555554 2355544443 343 2466667777764 578887
Q ss_pred cCh--hhHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHH
Q 036427 415 GFV--SKMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQW 488 (536)
Q Consensus 415 G~v--~~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~l 488 (536)
+-. ++=-.-...+|+.+=.. |..|-+|.+.+|+|+|..|....-..-.+..+...|+|-++ ++.++..+.--+|
T Consensus 822 ~va~k~eHvrr~~LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~L 901 (966)
T KOG4626|consen 822 PVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRL 901 (966)
T ss_pred cccchHHHHHhhhhhhhcccCcCcCCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHh
Confidence 754 23344556788866443 77888999999999999996432222234456677888765 5888888877788
Q ss_pred hCCCHHHHHHHHHHHHHhc--CC-chHHHHHHHHHHHHh
Q 036427 489 FGPKIDELKAMSQNALKLA--RP-DAVFRIVQDLHELVR 524 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a--~~-~~~~~i~~~i~~l~~ 524 (536)
-. |.+.++++...-+... .+ +...+.+..++++..
T Consensus 902 at-d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~ 939 (966)
T KOG4626|consen 902 AT-DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL 939 (966)
T ss_pred hc-CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH
Confidence 77 8888888887665532 22 455555666655544
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0017 Score=57.42 Aligned_cols=107 Identities=14% Similarity=0.160 Sum_probs=58.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
|||+++... .+ ....+++.|.+. |++|.+.+...+... +.. ......... . .+. +.
T Consensus 1 KIl~i~~~~-~~---~~~~~~~~L~~~---g~~V~ii~~~~~~~~---------~~~-~~~i~~~~~--~--~~~---k~ 56 (139)
T PF13477_consen 1 KILLIGNTP-ST---FIYNLAKELKKR---GYDVHIITPRNDYEK---------YEI-IEGIKVIRL--P--SPR---KS 56 (139)
T ss_pred CEEEEecCc-HH---HHHHHHHHHHHC---CCEEEEEEcCCCchh---------hhH-hCCeEEEEe--c--CCC---Cc
Confidence 688888765 33 466889999998 889988776332100 000 011001111 0 000 00
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecC
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d 282 (536)
.. .... ..++.+++++.+||+||++.+....+.. .+.+..+ .+|++...++
T Consensus 57 ~~--~~~~-~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~---~~~~i~~~hg 108 (139)
T PF13477_consen 57 PL--NYIK-YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLK---NKKVIYTVHG 108 (139)
T ss_pred cH--HHHH-HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcC---CCCEEEEecC
Confidence 11 1112 2488899999999999999876433322 2333333 3788766664
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.012 Score=54.81 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=83.3
Q ss_pred CceEEEEeC-C---CCchHHHHHHHHHHHHHhccCCceEEEEeeccccc--CCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 144 PKKVLILMS-D---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH--TPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 144 ~mKIL~~~~-~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~--~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|+||+|+.+ | .-||-++.+..|+..|.++ +++|+|....... ....+++.. +.......
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~---g~~v~Vyc~~~~~~~~~~~y~gv~-----------l~~i~~~~- 65 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSK---GIDVTVYCRSDYYPYKEFEYNGVR-----------LVYIPAPK- 65 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcC---CceEEEEEccCCCCCCCcccCCeE-----------EEEeCCCC-
Confidence 578999853 2 2389999999999999998 7777776543221 111111111 11110000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccccc-----
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTW----- 290 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~----- 290 (536)
....... ...........+.++. .+.|+|+..+.....+.+.+.++.... .+++++-.+.+.....+|
T Consensus 66 -~g~~~si---~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~-g~~v~vN~DGlEWkR~KW~~~~k 140 (185)
T PF09314_consen 66 -NGSAESI---IYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK-GGKVVVNMDGLEWKRAKWGRPAK 140 (185)
T ss_pred -CCchHHH---HHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc-CCcEEECCCcchhhhhhcCHHHH
Confidence 0000000 0111111122222332 357899887754222212223332111 146655554443222222
Q ss_pred ---------ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCC
Q 036427 291 ---------FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVR 327 (536)
Q Consensus 291 ---------~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~ 327 (536)
..+.+|.+++.|+...+.+.+..- ..+..+++++.|
T Consensus 141 ~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad 185 (185)
T PF09314_consen 141 KYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence 357999999999999999877422 345667777643
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=1.3 Score=43.10 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=30.4
Q ss_pred HHHHHHHHhhCCCEEE-EcCcccchH---HHHHHHHcCCCCCceEEEEec
Q 036427 236 REVAKGLMKYQPDIII-SVHPLMQHV---PLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi-~~~~~~~~i---~~~~~~~~g~~~~ip~v~~~~ 281 (536)
..+.++|++++.|++| .+||+...+ .+.+++..| ||++-+..
T Consensus 56 e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~g----ipy~r~eR 101 (257)
T COG2099 56 EGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETG----IPYLRLER 101 (257)
T ss_pred HHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhC----CcEEEEEC
Confidence 4788999999999998 578876443 345556555 89876543
|
|
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.025 Score=49.15 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=67.4
Q ss_pred cEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC-------
Q 036427 386 GQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA------- 456 (536)
Q Consensus 386 ~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~------- 456 (536)
-++++..|+++-. . . ...++.||. +++..+.+.|.++|+++|-++++.++..++|.|+.+...
T Consensus 31 e~lIvQyGn~d~k-p------v-agl~v~~F~~~~kiQsli~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvD 102 (161)
T COG5017 31 EELIVQYGNGDIK-P------V-AGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVD 102 (161)
T ss_pred hheeeeecCCCcc-c------c-cccEEEeechHHHHHHHhhcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhh
Confidence 4578889987511 1 1 125666665 699999999999999999999999999999999999743
Q ss_pred ccccCChhhHhhCCceeecCCHHH-HHHHHHH
Q 036427 457 GQEAGNVPYVVENGCGKFSKSPKE-IANMVSQ 487 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~d~~~-La~~I~~ 487 (536)
+++..-+..+.+.+.-+.+.+.+. |.+.++.
T Consensus 103 dHQvela~klae~~~vv~~spte~~L~a~l~~ 134 (161)
T COG5017 103 DHQVELALKLAEINYVVACSPTELVLQAGLQV 134 (161)
T ss_pred hHHHHHHHHHHhcCceEEEcCCchhhHHhHhh
Confidence 455445666777777776654433 4444433
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.022 Score=50.25 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=29.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|+|++.++ +||..+.++|+++|+++ ||+|.+...
T Consensus 1 Ili~~~Gt-~Ghv~P~lala~~L~~r---Gh~V~~~~~ 34 (139)
T PF03033_consen 1 ILIATGGT-RGHVYPFLALARALRRR---GHEVRLATP 34 (139)
T ss_dssp EEEEEESS-HHHHHHHHHHHHHHHHT---T-EEEEEET
T ss_pred CEEEEcCC-hhHHHHHHHHHHHHhcc---CCeEEEeec
Confidence 78899999 89999999999999999 889977643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.56 Score=52.09 Aligned_cols=169 Identities=11% Similarity=0.072 Sum_probs=105.4
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC--CCcEEEEEecCCH-------HHHHHHHcC----CCCCCEE
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE--PIGQVLVICGRNK-------KLANKLLST----DWKIPVQ 412 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~--~~~~~lvi~G~~~-------~l~~~l~~~----~~~~~V~ 412 (536)
++++.+++.++.+...+|...-++..+. .+.+. +.+ .+.+ +++.|++. ++.+.+.+. ....+|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~-~l~~i-~~~~~~pvq-~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLE-RLARI-LNNPERPVQ-IVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHH-HHHHH-hhCCCCCeE-EEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence 4567778888888888777655444333 33211 012 3454 56678764 244444332 2445666
Q ss_pred E-ecChh-hHHHHHhhcCeEEE-CC-----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--------
Q 036427 413 V-KGFVS-KMEEAMGACDCIIT-KA-----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-------- 476 (536)
Q Consensus 413 ~-~G~v~-~l~~ll~~aDv~V~-~s-----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-------- 476 (536)
| .+|-. --..+++.||+.+. |+ -|++-+=||..|.+.+.+--+...| ..+.+.|+.+.
T Consensus 462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E------~~~~~nGf~f~~~~~~~~~ 535 (601)
T TIGR02094 462 FLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGE------GYDGDNGWAIGDGEEYDDE 535 (601)
T ss_pred EEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccc------cCCCCcEEEECCCcccccc
Confidence 6 45543 34566799999999 76 1567778999999999986432222 12345566543
Q ss_pred ------CHHHHHHHHHHHh----CCC-----HHHHHHHHHHHHHh-cCCchHHHHHHHHHHHH
Q 036427 477 ------SPKEIANMVSQWF----GPK-----IDELKAMSQNALKL-ARPDAVFRIVQDLHELV 523 (536)
Q Consensus 477 ------d~~~La~~I~~ll----~~d-----~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~ 523 (536)
|.++|.++|++.+ ..+ |....+|.++|.+. +..++|.+.++++.++.
T Consensus 536 ~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 536 EEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 5777888776544 213 45577888887775 45799999999998764
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.44 Score=46.41 Aligned_cols=102 Identities=15% Similarity=0.075 Sum_probs=55.5
Q ss_pred CCCCEEE-EecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCHH-HHHH---HHcCCCCCCEEEecCh--hh
Q 036427 348 EDLPAVL-LMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNKK-LANK---LLSTDWKIPVQVKGFV--SK 419 (536)
Q Consensus 348 ~~~~~il-~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~-l~~~---l~~~~~~~~V~~~G~v--~~ 419 (536)
.+++.|+ ..|++...+.. .+.+.++++.+. .....++++ |...+ ..+. +.+......+.+.|.. .+
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~-----~~~~~vvl~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 176 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLK-----ERGYRVVLL-GGPEEQEKEIADQIAAGLQNPVINLAGKTSLRE 176 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHC-----CCT-EEEE---SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHH-----hhCceEEEE-ccchHHHHHHHHHHHHhcccceEeecCCCCHHH
Confidence 3445554 45554444443 456777777775 223555444 44443 2222 2222112257777764 58
Q ss_pred HHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 420 MEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 420 l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
+..+++.||++|+.-. +.+.=|.+.|+|+|++=...
T Consensus 177 ~~ali~~a~~~I~~Dt-g~~HlA~a~~~p~v~lfg~t 212 (247)
T PF01075_consen 177 LAALISRADLVIGNDT-GPMHLAAALGTPTVALFGPT 212 (247)
T ss_dssp HHHHHHTSSEEEEESS-HHHHHHHHTT--EEEEESSS
T ss_pred HHHHHhcCCEEEecCC-hHHHHHHHHhCCEEEEecCC
Confidence 9999999999998743 23455999999999985443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.67 E-value=2.5 Score=41.73 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=35.6
Q ss_pred hcCeEEEC-CC-----hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHh
Q 036427 426 ACDCIITK-AG-----PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 426 ~aDv~V~~-sG-----~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll 489 (536)
.+|++|+. || .-.+--|..+|+|||++..+.... ....+.+.+++.+.+++++
T Consensus 197 ~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~-----------~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 197 RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP-----------GVAIFDDISQLNQFVARLL 255 (256)
T ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC-----------CCccCCCHHHHHHHHHHhc
Confidence 57889987 43 235556899999999999764211 1123458888888777654
|
This enzyme was found to be a monomer by gel filtration. |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=95.35 E-value=2.9 Score=40.51 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=75.9
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-CCCCcHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-EGMGPIEATA 369 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~g~k~~~~~l 369 (536)
+.+.++.+.+-.+...+.+.+.|++. ++.+++-++. ...+..+...... .....+.+.... .......+.+
T Consensus 124 ~l~~~~~i~vRD~~S~~~l~~~g~~~-~~~~~~D~af--~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 195 (286)
T PF04230_consen 124 ILSKADYISVRDEYSYELLKKLGISG-NVKLVPDPAF--LLPPSYPDEDKSK-----PKRNYISVSNSPSRNNEEYIEEI 195 (286)
T ss_pred HHhCCCEEEECCHHHHHHHHHcCCCC-CcEEEeCchh--hcCcccccccccc-----cccceeeeccccchhhhhHHHHH
Confidence 45568899999999988788888875 7888876653 1111111110000 011112122111 1122223333
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHc----CCCCCCEEEecCh---hhHHHHHhhcCeEEECCChHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-KLANKLLS----TDWKIPVQVKGFV---SKMEEAMGACDCIITKAGPGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~----~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG~~tllE 441 (536)
..+...+.+ ......++....... ........ .....++...... .++.++++.||++|+..- ...+=
T Consensus 196 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl-H~~I~ 271 (286)
T PF04230_consen 196 AELIQRLLD---KGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL-HGAIL 271 (286)
T ss_pred HHHHHHhhc---ccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC-HHHHH
Confidence 333333321 111222222222221 11111110 2222333333332 589999999999998775 33456
Q ss_pred HHHhCCcEEEecc
Q 036427 442 AMIRGLPIILNDF 454 (536)
Q Consensus 442 Ama~GlPVI~~~~ 454 (536)
|+++|+|+|++.+
T Consensus 272 a~~~g~P~i~i~y 284 (286)
T PF04230_consen 272 ALSLGVPVIAISY 284 (286)
T ss_pred HHHcCCCEEEEec
Confidence 9999999999874
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=95.24 E-value=4.5 Score=42.03 Aligned_cols=234 Identities=12% Similarity=0.073 Sum_probs=115.2
Q ss_pred CCCEEEEcCccc--------chHH----HHHHHHcCCCCCceEEEEecCCCC-ccc--cc----ccccCCEEEEcCHHHH
Q 036427 246 QPDIIISVHPLM--------QHVP----LRILRAKGLLKKIVFTTVITDLST-CHP--TW----FHKLVTRCYCPTADVA 306 (536)
Q Consensus 246 kPDvVi~~~~~~--------~~i~----~~~~~~~g~~~~ip~v~~~~d~~~-~~~--~~----~~~~~d~vi~~S~~~~ 306 (536)
+.|++|..+... ..++ +.+++..+ .|.+.+...... .++ +| ..+.+..+.+-.+...
T Consensus 89 ~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~----kp~~~~g~svGP~~~~~s~~~~~~~~~~~s~i~vRD~~S~ 164 (385)
T COG2327 89 KADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAG----KPTFFFGQSVGPLKHPLSRQLLNYVLGGCSAISVRDPVSY 164 (385)
T ss_pred hCCEEEEcCcccccCccccceehhhHHHHHHHHHcC----CCEEEEeccCCCccCHHHHHHHHHHhcCCcEEEEecHHhH
Confidence 589999866211 1111 22334343 788777765543 222 33 3456678888888889
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc---H--HHHHHHHHHHhhhccc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP---I--EATARALGNALYDENL 381 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~---~--~~~l~al~~~l~~~~~ 381 (536)
+.+...|++.. ... |+-+.-+....+. ....+ ....+.+.+..+.+...+ . .+....+.+.+.. .
T Consensus 165 ~llk~~gi~a~---l~~---D~Af~L~~~~~~~-~~~~~-~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~--~ 234 (385)
T COG2327 165 ELLKQLGINAR---LVT---DPAFLLPASSQNA-TASDV-EAREKTVAITLRGLHPDNTAQRSILKYVNEALDLVER--Q 234 (385)
T ss_pred HHHHHcCCCeE---eec---Ccceecccccccc-ccccc-ccccceEEEEecccCCchhhhHHHHHHHHHHHHHHHH--h
Confidence 88887787642 222 3322221110000 00001 122345555555422111 1 1122222222100 0
Q ss_pred CCCCcEEEEEe-cCCH--HHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 382 GEPIGQVLVIC-GRNK--KLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 382 ~~~~~~~lvi~-G~~~--~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
....+++..+. +..+ ...+.+..+ ....++.+..-. +++-..+++||++|..= -.+++=|++.|+|+|.+.+.
T Consensus 235 ~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R-~HsaI~al~~g~p~i~i~Y~ 313 (385)
T COG2327 235 VKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMR-LHSAIMALAFGVPAIAIAYD 313 (385)
T ss_pred hhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeeh-hHHHHHHHhcCCCeEEEeec
Confidence 12333333332 2222 122333322 223556554322 35566889999988532 46678899999999999974
Q ss_pred CccccCChhhHhhCCceeec-C----CHHHHHHHHHHHhCCCHHHHHH
Q 036427 456 AGQEAGNVPYVVENGCGKFS-K----SPKEIANMVSQWFGPKIDELKA 498 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~-~----d~~~La~~I~~ll~~d~~~~~~ 498 (536)
.-. .....+.|.-.++ + +.+.+.+.+.+.+...++.+++
T Consensus 314 ~K~----~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 314 PKV----RGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLDELRER 357 (385)
T ss_pred HHH----HHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence 321 2234444443222 1 6777777777666635565554
|
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.13 E-value=2.4 Score=44.54 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=122.8
Q ss_pred cCCEEEEcCHHHHHHHH-HhCCCCCCEEEeCCCCCCCCCCCCCchH---HHHHHcCCCCCCCEEEEecCCCCCC------
Q 036427 294 LVTRCYCPTADVAKRAM-KAGLQASQIKVYGLPVRPSFVKPVRPKV---ELRRELGMDEDLPAVLLMGGGEGMG------ 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~-~~g~~~~ki~vignpv~~~~~~~~~~~~---~~r~~lgi~~~~~~il~~gg~~g~k------ 363 (536)
..|.+.+.++....-.. ..++...++..+|.|-.+.++....... .....+.++.++++|++.--..+..
T Consensus 148 ~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~~~ 227 (388)
T COG1887 148 HWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLIGTQ 227 (388)
T ss_pred eeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCccccchh
Confidence 44566666666555533 3578888999999998776554332222 2234566777788888765443332
Q ss_pred cHH--HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHH
Q 036427 364 PIE--ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ~~~--~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tll 440 (536)
... ..+.++.+.+. ..+. +++.-.++...+.+... ...+.+..+..-.++.++|..+|++|+-- +.+..
T Consensus 228 ~~~~~~~~~~~~~~l~-----~~~~--~ii~k~Hp~is~~~~~~~~~~~~~~~vs~~~di~dll~~sDiLITDy-SSv~f 299 (388)
T COG1887 228 FFNLDIDIEKLKEKLG-----ENEY--VIIVKPHPLISDKIDKRYALDDFVLDVSDNADINDLLLVSDILITDY-SSVIF 299 (388)
T ss_pred hhhhhhhHHHHHHhhc-----cCCe--EEEEecChhhhhhhhhhhhccceeEecccchhHHHHHhhhCEEEeec-hHHHH
Confidence 111 12222322221 1233 34444555333333221 11222333333458999999999999853 36889
Q ss_pred HHHHhCCcEEEeccCCccc---cCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHH----HHHHHHHHHhcCCchHH
Q 036427 441 EAMIRGLPIILNDFIAGQE---AGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDEL----KAMSQNALKLARPDAVF 513 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e---~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~----~~m~~~a~~~a~~~~~~ 513 (536)
|+|..-+|||..-....+- .|-........-|-++.+.+++.++|..... +++.. +...+.........+++
T Consensus 300 df~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~~~~~-~~~~~~~k~~~~~~~~~~~~dg~ss~ 378 (388)
T COG1887 300 DFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIKPYDE-DGNYDLEKLRVFNDKFNSYEDGRSSE 378 (388)
T ss_pred HHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccccHHHHHHHHHhhhc-ccchhHHHHHHHHHhhcccccccHHH
Confidence 9999999999986543211 1111112223345566788999999988887 43322 22333333344456777
Q ss_pred HHHHHHHH
Q 036427 514 RIVQDLHE 521 (536)
Q Consensus 514 ~i~~~i~~ 521 (536)
++++.+.+
T Consensus 379 ri~~~i~~ 386 (388)
T COG1887 379 RILKLIFK 386 (388)
T ss_pred HHHHHHhc
Confidence 77776643
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=94.96 E-value=4.6 Score=40.60 Aligned_cols=165 Identities=12% Similarity=-0.004 Sum_probs=84.6
Q ss_pred ceEEEEecCCCCcc-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCC
Q 036427 274 IVFTTVITDLSTCH-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGM 346 (536)
Q Consensus 274 ip~v~~~~d~~~~~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi 346 (536)
.|++.+...+.... .+++.+.++.+.+-.+...+.+.+.|+ ++.+.+-++. .-+...... ..
T Consensus 100 k~~~~~g~giGP~~~~~~r~~~~~~l~~~~~i~vRD~~S~~~l~~~g~---~i~~~~D~a~---~l~~~~~~~-----~~ 168 (298)
T TIGR03609 100 KPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGI---PAELAADPVW---LLPPEPWPG-----GE 168 (298)
T ss_pred CCEEEEecccCCcCCHHHHHHHHHHHccCCEEEEeCHHHHHHHHHhCC---CceEeCChhh---hCCCCcccc-----cc
Confidence 67766655443211 123567889999989999988887787 3666554432 111100000 01
Q ss_pred CCCCCEEEEecCCCCC-C-cHHHHHHHHHHHhhhcccCCCCcEEEEEecC--CH-HHHHHHHcC-CCCCCEEEecChhhH
Q 036427 347 DEDLPAVLLMGGGEGM-G-PIEATARALGNALYDENLGEPIGQVLVICGR--NK-KLANKLLST-DWKIPVQVKGFVSKM 420 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~-k-~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--~~-~l~~~l~~~-~~~~~V~~~G~v~~l 420 (536)
..+.+.+.+..+.+.. . ...+.+..+++.+.+ ..+.+++++... .+ +..+.+.+. .....+.......++
T Consensus 169 ~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~----~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~ 244 (298)
T TIGR03609 169 PLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQR----DTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEEL 244 (298)
T ss_pred cCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHH----hhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHH
Confidence 1234566665554322 1 111222222222221 224444444322 22 233334332 111223211122477
Q ss_pred HHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 421 EEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 421 ~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
.++++.||++|...- ..++=|+.+|+|+|.+.+
T Consensus 245 ~~~i~~~~~vI~~Rl-H~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 245 LGLFASARLVIGMRL-HALILAAAAGVPFVALSY 277 (298)
T ss_pred HHHHhhCCEEEEech-HHHHHHHHcCCCEEEeec
Confidence 888999999998665 345669999999999864
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.39 Score=47.13 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcC----CCCCceEEEEecCCCC--cc----------c------
Q 036427 233 FIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKG----LLKKIVFTTVITDLST--CH----------P------ 288 (536)
Q Consensus 233 ~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g----~~~~ip~v~~~~d~~~--~~----------~------ 288 (536)
.+.+...+++++ .+|||||++.-....+|+.+ +... ...++|++..+|.... .. +
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~l-k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYL-KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHH-HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHh-ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcc
Confidence 345566677776 68999999875444445543 4332 1234888877775431 00 0
Q ss_pred -------------ccccccCCEEEEcCHHHHHHHH
Q 036427 289 -------------TWFHKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 289 -------------~~~~~~~d~vi~~S~~~~~~l~ 310 (536)
+.-...+|.+.++|+..++.+.
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTT
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHh
Confidence 0012478899999999888764
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.59 Score=46.43 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=36.6
Q ss_pred CCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 408 KIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 408 ~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
..++.+...-.++.+++..||.+|+-++ .+-+||+.+|+|||+...
T Consensus 181 ~~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 181 LPNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecC
Confidence 3456665555588999999999998754 577999999999999764
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=93.61 E-value=7.9 Score=38.01 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=30.3
Q ss_pred HHHHHHHHhhCCCEEE-EcCcccchHH---HHHHHHcCCCCCceEEEEecCC
Q 036427 236 REVAKGLMKYQPDIII-SVHPLMQHVP---LRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi-~~~~~~~~i~---~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
..+.++|++.++|+|| ++||+...+. ..+++..| ||++-+....
T Consensus 56 ~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~----ipylR~eRp~ 103 (249)
T PF02571_consen 56 EGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG----IPYLRFERPS 103 (249)
T ss_pred HHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC----cceEEEEcCC
Confidence 4778899999999998 5888865442 23344444 8987665543
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=93.11 E-value=3 Score=47.60 Aligned_cols=169 Identities=11% Similarity=0.052 Sum_probs=97.0
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC-CCCcEEEEEecCCH-------HHHHHHHcC----CCCCCEEE
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG-EPIGQVLVICGRNK-------KLANKLLST----DWKIPVQV 413 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~-~~~~~~lvi~G~~~-------~l~~~l~~~----~~~~~V~~ 413 (536)
++++..++.++.+...+|...-++..+. .+.++... ..+++ +|++|++. ++.+.+.+. ....+|.|
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~-rl~~il~~~~~pvQ-~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvf 551 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPE-RLKRLLNDPERPVQ-FIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVF 551 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHH-HHHHHhhCCCCCeE-EEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEE
Confidence 4455667777777777777554443332 22211101 13444 56678764 233333322 33456766
Q ss_pred e-cChhh-HHHHHhhcCeEEECC------ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC---------
Q 036427 414 K-GFVSK-MEEAMGACDCIITKA------GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--------- 476 (536)
Q Consensus 414 ~-G~v~~-l~~ll~~aDv~V~~s------G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--------- 476 (536)
+ +|-.. -..+++.||+.+.+| -|++=+=||.-|.+.+.+--+-..| .-+.+.|+.+.
T Consensus 552 le~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E------~~~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 552 LEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDE------GYDGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccc------ccCCCCceEeCCCccccChh
Confidence 4 44333 456679999999886 1455567899999999987433233 22334455542
Q ss_pred -----CHHHHHHHHHH----HhCCC-----HHHHHHHHHHHHH-hcCCchHHHHHHHHHHH
Q 036427 477 -----SPKEIANMVSQ----WFGPK-----IDELKAMSQNALK-LARPDAVFRIVQDLHEL 522 (536)
Q Consensus 477 -----d~~~La~~I~~----ll~~d-----~~~~~~m~~~a~~-~a~~~~~~~i~~~i~~l 522 (536)
|.++|.+.|++ ++-.. |....+|.+++.+ .+..+++.++++++.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 34555555543 22102 5667777777766 45668999998888653
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=87.50 E-value=2.9 Score=43.91 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=50.6
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
.++||||++..+. ..++.+++.|.+. |++|++++..... .. .+...... .+. .+.+..
T Consensus 2 ~~~~~VLI~G~~~-----~~~l~iar~l~~~---G~~Vi~~d~~~~~-------~~-~~s~~~d~--~~~----~p~p~~ 59 (389)
T PRK06849 2 NTKKTVLITGARA-----PAALELARLFHNA---GHTVILADSLKYP-------LS-RFSRAVDG--FYT----IPSPRW 59 (389)
T ss_pred CCCCEEEEeCCCc-----HHHHHHHHHHHHC---CCEEEEEeCCchH-------HH-HHHHhhhh--eEE----eCCCCC
Confidence 4568999986655 3688999999998 8899998764321 00 01000110 011 000110
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
....+...+.++++++++|+|+....
T Consensus 60 --------d~~~~~~~L~~i~~~~~id~vIP~~e 85 (389)
T PRK06849 60 --------DPDAYIQALLSIVQRENIDLLIPTCE 85 (389)
T ss_pred --------CHHHHHHHHHHHHHHcCCCEEEECCh
Confidence 12234467788899999999998765
|
|
| >TIGR03646 YtoQ_fam YtoQ family protein | Back alignment and domain information |
|---|
Probab=81.77 E-value=10 Score=33.01 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=42.1
Q ss_pred hHHHHHhhcCeEEECCC-----hHHHHH---HHHhCCcEEEeccCCccccCChhhHhhCC--ceeecCCHHHHHHHHHHH
Q 036427 419 KMEEAMGACDCIITKAG-----PGTIAE---AMIRGLPIILNDFIAGQEAGNVPYVVENG--CGKFSKSPKEIANMVSQW 488 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG-----~~tllE---Ama~GlPVI~~~~~~~~e~~na~~lv~~g--~g~~~~d~~~La~~I~~l 488 (536)
....++..||++|..-| .++.+. |.++|+|.|+.-....+- .|.+-. .-.+++++++..+.+..+
T Consensus 68 RT~~li~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~H-----pLKEvdaaA~avaetp~Qvv~iL~Yv 142 (144)
T TIGR03646 68 RTRKLIEKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIH-----PLKEVDNKAQAVVETPEQAIETLKYI 142 (144)
T ss_pred HHHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccc-----cHHHHhHHHHHHhcCHHHHHHHHHHh
Confidence 35678999999998864 355554 789999999987543211 122221 222345777777777665
Q ss_pred h
Q 036427 489 F 489 (536)
Q Consensus 489 l 489 (536)
+
T Consensus 143 ~ 143 (144)
T TIGR03646 143 L 143 (144)
T ss_pred h
Confidence 4
|
Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship. |
| >TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 | Back alignment and domain information |
|---|
Probab=81.01 E-value=32 Score=31.89 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=31.6
Q ss_pred CEEEecChhhHHHHHhhcCeEEE-CCChHHHHHHHHh---------CCcEEEeccC
Q 036427 410 PVQVKGFVSKMEEAMGACDCIIT-KAGPGTIAEAMIR---------GLPIILNDFI 455 (536)
Q Consensus 410 ~V~~~G~v~~l~~ll~~aDv~V~-~sG~~tllEAma~---------GlPVI~~~~~ 455 (536)
.+.+....+....++..||++|. |+|.+|+-|.+.. .+|+++.+..
T Consensus 80 ~i~~~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~ 135 (178)
T TIGR00730 80 LIEVNGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVN 135 (178)
T ss_pred eEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCc
Confidence 34444444566788899998766 4457888774332 9999998853
|
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 536 | ||||
| 3s2u_A | 365 | Crystal Structure Of The Pseudomonas Aeruginosa Mur | 4e-05 |
| >pdb|3S2U|A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-Glcnac Substrate Complex Length = 365 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 536 | |||
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 1e-21 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 7e-07 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 2e-06 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 6e-05 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 2e-04 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 3e-04 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 6e-04 |
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Length = 364 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 1e-21
Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 320 KVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD- 378
+V G PVR + P ++ L E VL++GG +G AR L +
Sbjct: 157 EVVGNPVRTDVLALPLP----QQRLAGREGPVRVLVVGGSQG-------ARILNQTMPQV 205
Query: 379 -ENLGEPIGQVLVICGRNKKLA-NKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGP 436
LG+ + + G+ + + + + + +V F+ M A D ++ ++G
Sbjct: 206 AAKLGDSV-TIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGA 264
Query: 437 GTIAEAMIRGLPIIL------NDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVS 486
T++E GLP + + Q+ N + + G K + S +AN ++
Sbjct: 265 LTVSEIAAAGLPALFVPFQHKDR----QQYWNALPLEKAGAAKIIEQPQLSVDAVANTLA 320
Query: 487 QWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526
W + L M++ A + PDA R+ ++ + R
Sbjct: 321 GW---SRETLLTMAERARAASIPDATERVANEVSRVARAL 357
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.3 bits (171), Expect = 8e-13
Identities = 61/491 (12%), Positives = 136/491 (27%), Gaps = 147/491 (29%)
Query: 117 ERNGIRDENGGVLED------EGLPLNGIENDQPKKVL-------ILMSDTGGGHRAS-A 162
E + + +L + ++ D PK +L I+MS S
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSILSKEEIDHIIMS----KDAVSGT 64
Query: 163 EAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222
+ K Q FV ++ + + + + P Y +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-----QPSMMTRMYIEQRDRL 119
Query: 223 HQSNFAATSTFIAR-----EVAKGLMKYQPDIIISVHPLM-----QHVPLRILRAKGLLK 272
+ N ++R ++ + L++ +P + + + V L + + +
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGSGKTWVALDVCLSYKVQC 178
Query: 273 KI---VFTTVITDLSTCHPTWFHKLVTRCYCPTADVAK-----RAMKAGLQASQIKVYGL 324
K+ +F W + + C P + + + +
Sbjct: 179 KMDFKIF-------------WLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 325 PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP 384
+R ++ ELRR L + LL+ L N + +
Sbjct: 224 KLRIHSIQA-----ELRR-LLKSKPYENCLLV---------------LLN-VQNAKAWNA 261
Query: 385 --IG-QVLVICGRNKKLANKLLSTDWKIPVQV---KGFVSKMEEAMGAC-DCIITKAGPG 437
+ ++L+ R K++ + L + +E + + P
Sbjct: 262 FNLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCR--PQ 316
Query: 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELK 497
+ ++ P L+ IA +S ++ W D+L
Sbjct: 317 DLPREVLTTNPRRLS-IIA-------------------ESIRDGLATWDNWKHVNCDKLT 356
Query: 498 AMSQNALKLARPD---------AVFR------------------------IVQDLHE--L 522
+ +++L + P +VF +V LH+ L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416
Query: 523 VRQRNFVPHYS 533
V ++ S
Sbjct: 417 VEKQPKESTIS 427
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 6e-06
Identities = 42/323 (13%), Positives = 100/323 (30%), Gaps = 59/323 (18%)
Query: 248 DIIISVHPLMQ-HVPLRILRAKGLLKKIVFTTVITDLSTCHPTWF-HKLVTRCYCPTADV 305
II+S + L +K +++V V L + + + T P+
Sbjct: 53 HIIMSKDAVSGTLRLFWTLLSKQ--EEMVQKFVEEVLRINYK-FLMSPIKTEQRQPSMMT 109
Query: 306 AKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP- 364
Q ++ V ++P ++LR+ L VL+ G G G
Sbjct: 110 RMYIE----QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL-GSGKT 164
Query: 365 --IEATARA---------------LGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDW 407
+ L N E + E + Q L +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML-QKL--LYQIDPNWTSRSDHSS 221
Query: 408 KIPV---QVKGFVSKMEEAMGACDCII------TKAGPGTIAEAMIRGLPIIL------- 451
I + ++ + ++ ++ +C++ A I+L
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA----KAWNAFNLSCKILLTTRFKQV 277
Query: 452 NDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDA 511
DF++ ++ +++ +P E+ +++ ++ + +L + L P
Sbjct: 278 TDFLSAATTTHIS--LDHHSMTL--TPDEVKSLLLKYLDCRPQDLP---REVLTTN-PRR 329
Query: 512 VFRIVQDLHELVRQRNFVPHYSC 534
+ I + + + + + H +C
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNC 352
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 51/315 (16%), Positives = 103/315 (32%), Gaps = 77/315 (24%)
Query: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRIL--RAKGLLKKIVFT---TVITDLSTCHPT 289
A ++A+ + DI+ VH + H L + G KIV T T IT L
Sbjct: 88 ASKMAEVAQRENLDIL-HVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLG--SDP 144
Query: 290 WFHKLVTRCY-------CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRR 342
+ L+ + + + I+ + R +L++
Sbjct: 145 SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFK-RDMTQLKK 203
Query: 343 ELGMDEDLPAVLLMG------GGEGMGPIEATARALGNALYDENLGEPIGQVLVICG--- 393
E G+ E ++ + + + ++A A+ + + L++ G
Sbjct: 204 EYGISESEKILIHISNFRKVKRVQDV--VQAFAKIVTE----------VDAKLLLVGDGP 251
Query: 394 -RN--KKLANKLLSTDWKIPVQVK--GFVSKMEEAMGACDCII----TKAGPGTIAEAMI 444
+L L I +V G + E + D ++ ++ + EAM
Sbjct: 252 EFCTILQLVKNL-----HIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMA 306
Query: 445 RGLPIILNDFIAGQEAGNVPYVVENG-CGKF---SKSPKEIANMVSQWFGPKIDEL---- 496
G+P I G G +P V+++G G + +A+ + +L
Sbjct: 307 CGVPCI------GTRVGGIPEVIQHGDTG-YLCEVGDTTGVAD--------QAIQLLKDE 351
Query: 497 ---KAMSQNALKLAR 508
+ M + A +
Sbjct: 352 ELHRNMGERARESVY 366
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 51/331 (15%), Positives = 106/331 (32%), Gaps = 76/331 (22%)
Query: 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHK 293
+ RE +K + D ++ VH P ++ ++ I DLS+ + ++
Sbjct: 114 VNRENSKFIDLSSFDYVL-VH---DPQPAALIEFYEKKSPWLWRCHI-DLSSPNREFWEF 168
Query: 294 LVTRCYCPTADVA--KRAMKAGLQASQIKVYGLP--VRPSFVKPVRPK----VELRRELG 345
L + ++ L ++ + +P + P K V K + +
Sbjct: 169 LRRFVEKYDRYIFHLPEYVQPELDRNKAVI--MPPSIDPLSEKNVELKQTEILRILERFD 226
Query: 346 MDEDLPAVLLMG------GGEGMGPIEATARALGNALYDENLGEPIGQVLVICG------ 393
+D + P + + G + IE + + G L++ G
Sbjct: 227 VDPEKPIITQVSRFDPWKGIFDV--IEIYRKV---------KEKIPGVQLLLVGVMAHDD 275
Query: 394 ---------RNKKLANKLLSTDWKIPVQVKGFVSK-MEEAMGACDCIITKA---GPG-TI 439
+K+ + G ++ + A D I+ + G G T+
Sbjct: 276 PEGWIYFEKTLRKIGEDYDVKVL---TNLIGVHAREVNAFQRASDVILQMSIREGFGLTV 332
Query: 440 AEAMIRGLPIILNDFIAGQEAGNV---PYVVENG-CGKFSKSPKEIANMVSQWFG-PKID 494
EAM +G P+I V + + +G G + E +V P +
Sbjct: 333 TEAMWKGKPVI---------GRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHP--E 381
Query: 495 ELKAMSQNALKLARPDAVF---RIVQDLHEL 522
K M A + R F + ++ ++
Sbjct: 382 VSKEMGAKAKERVR--KNFIITKHMERYLDI 410
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 55/324 (16%)
Query: 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKL 294
V L ++ D ++ + + L + A + L + H
Sbjct: 69 YAWVQNHLKEHPADRVVGFNKM---PGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYA 125
Query: 295 -----------VTRCYCPTADVAKRAMKA-GLQASQIKVYGLPVRPS-FVKPVRP--KVE 339
T+ T K + + ++ + P P +
Sbjct: 126 AFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREI 185
Query: 340 LRRELGMDEDLPAVLLMGGGEG-MGP---IEATARALGNALYDENLGEPIGQVLVICGRN 395
R++ G+ E +L +G G G IEA A L +L L + V+
Sbjct: 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALAS-LPESLRHNTL------LFVVGQDK 238
Query: 396 ----KKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGP------GTIA-EAMI 444
+ LA KL V + + E M A D ++ P G + EA+
Sbjct: 239 PRKFEALAEKLGVRSN---VHFFSGRNDVSELMAAADLLLH---PAYQEAAGIVLLEAIT 292
Query: 445 RGLPIILNDFIAGQEAGNVPYVVENGCG---KFSKSPKEIANMVSQWFGPKIDELKAMSQ 501
GLP+ + G Y+ + CG S +++ ++ + A ++
Sbjct: 293 AGLPV-----LTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAE 346
Query: 502 NALKLARPDAVFRIVQDLHELVRQ 525
NA A ++ + + +++
Sbjct: 347 NARHYADTQDLYSLPEKAADIITG 370
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 40/274 (14%), Positives = 79/274 (28%), Gaps = 57/274 (20%)
Query: 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFH 292
A +A+ + + + D + + + + K++ +T ++
Sbjct: 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAK-QAGASKVIASTHGHEVGWSMLPGSR 131
Query: 293 KLVTRCY-------CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRP--KVELRRE 343
+ + + + +R A + V P P K R++
Sbjct: 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKK 191
Query: 344 LGMDEDLPAVLLMG------GGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-- 395
LG + P + G + + I+A + + L+I G
Sbjct: 192 LGFTDTTPVIACNSRLVPRKGQDSL--IKAMPQV---------IAARPDAQLLIVGSGRY 240
Query: 396 ----KKLANKLLSTDWKIPVQVKGFVSK--MEEAMGACD-----CIITKAGPG------T 438
++LA + V+ G + M + A D G
Sbjct: 241 ESTLRRLATDVSQ-----NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIV 295
Query: 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCG 472
EA G+P+ IAG +G P V G
Sbjct: 296 YLEAQACGVPV-----IAG-TSGGAPETVTPATG 323
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 20/127 (15%)
Query: 411 VQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG 470
V+ ++ + +T G + EA G+P++L A + A + V+E G
Sbjct: 283 VEAHQWIP-FHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELG 341
Query: 471 CG---KFSK-SPKEIANMVSQWFGPKIDEL---KAMSQNALKLAR----PDAVFRIVQDL 519
G + + P I V + L A+ + ++ R R ++
Sbjct: 342 LGSVLRPDQLEPASIREAV--------ERLAADSAVRERVRRMQRDILSSGGPARAADEV 393
Query: 520 HELVRQR 526
+ +
Sbjct: 394 EAYLGRV 400
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 6e-04
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAM-GACDCIITKAGPGTIAEAMIR 445
++ + A + + + K+ V F +KM+ + D +I+ AG G+I +++
Sbjct: 92 KIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRL 151
Query: 446 GLPIIL 451
P+I+
Sbjct: 152 NKPLIV 157
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 536 | |||
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.98 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.97 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.97 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.97 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.97 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.96 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.96 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.96 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.95 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.95 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.95 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.94 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.94 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.93 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.93 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.92 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.92 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.92 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.92 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.91 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.91 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.89 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.89 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.89 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.89 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.88 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.87 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.86 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.86 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.86 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.86 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.85 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.84 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.84 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.84 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.81 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.72 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.71 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.7 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 99.64 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.63 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.63 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 99.62 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.62 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.61 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.59 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.56 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 99.54 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 99.5 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 99.46 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.21 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.15 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.63 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.54 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 98.52 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 98.33 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.92 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 89.03 | |
| 3ehd_A | 162 | Uncharacterized conserved protein; PSI,MCSG,PF0501 | 86.85 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 86.29 | |
| 1rcu_A | 195 | Conserved hypothetical protein VT76; structural ge | 84.62 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 84.56 | |
| 1s2d_A | 167 | Purine trans deoxyribosylase; ribosylate intermedi | 83.81 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 81.13 |
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=284.77 Aligned_cols=341 Identities=19% Similarity=0.231 Sum_probs=241.7
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccc------cCCCCCCcchhHHHHHHhhccccceeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSD------HTPWPFNQLPRSYNFLVKHGPLWKMTYY 215 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~------~~~~~~~~~~~~y~~~~~~~~l~~~~~~ 215 (536)
|++||+|.++|| |||..++++||++|+++ |++|..+ +...- ..++++..++... + +....+.
T Consensus 1 M~~~i~i~~GGT-gGHi~palala~~L~~~---g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~--~-~~~~~~~---- 69 (365)
T 3s2u_A 1 MKGNVLIMAGGT-GGHVFPALACAREFQAR---GYAVHWLGTPRGIENDLVPKAGLPLHLIQVSG--L-RGKGLKS---- 69 (365)
T ss_dssp --CEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECSSSTHHHHTGGGTCCEEECC------------------
T ss_pred CCCcEEEEcCCC-HHHHHHHHHHHHHHHhC---CCEEEEEECCchHhhchhhhcCCcEEEEECCC--c-CCCCHHH----
Confidence 457999999999 79999999999999999 8888654 32110 1111111111100 0 0000000
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-ccccccccc
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKL 294 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~ 294 (536)
. ... .........+..+++++++||+|++++.+.+.....+++..| +|++.+..+... ...+|+.++
T Consensus 70 -----~-~~~--~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~----iP~vihe~n~~~G~~nr~l~~~ 137 (365)
T 3s2u_A 70 -----L-VKA--PLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNG----VPLVIHEQNAVAGTANRSLAPI 137 (365)
T ss_dssp ---------C--HHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTT----CCEEEEECSSSCCHHHHHHGGG
T ss_pred -----H-HHH--HHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcC----CCEEEEecchhhhhHHHhhccc
Confidence 0 000 111122234667889999999999999877654455566665 898755444321 234678899
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
++.+++..+.. .....++.++|+|++++++.... ..++++++++.++++||+.+...+.+.+..+..
T Consensus 138 a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~------~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~ 204 (365)
T 3s2u_A 138 ARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAH------ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALA 204 (365)
T ss_dssp CSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTT------SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHH
T ss_pred cceeeeccccc-------ccCcCcEEEECCCCchhhccchh------hhcccCCCCcEEEEECCcCCccccchhhHHHHH
Confidence 99998877643 12346778999999987765432 234567788999999999998887776665555
Q ss_pred HhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 375 ALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
.+. ...+..+++++|.+. ...+.+++. ..++.+.+|+++|.++|+.||++|+.+|++|+.|+|++|+|+|++
T Consensus 205 ~l~----~~~~~~vi~~~G~~~~~~~~~~~~~~--~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 205 QVP----LEIRPAIRHQAGRQHAEITAERYRTV--AVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLV 278 (365)
T ss_dssp TSC----TTTCCEEEEECCTTTHHHHHHHHHHT--TCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hcc----cccceEEEEecCccccccccceeccc--ccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEe
Confidence 443 234566778888764 334444443 357889999999999999999999999999999999999999999
Q ss_pred ccC---CccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 453 DFI---AGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 453 ~~~---~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|.+ .++|..|++.+++.|.+.+++ +++.|+++|.++++ ||+.+++|++++++++..+++++|++.|+++.++
T Consensus 279 p~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~-d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 279 PLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLM-HPETLRSMADQARSLAKPEATRTVVDACLEVARG 357 (365)
T ss_dssp C-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH-CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC--
T ss_pred ccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 875 357777999999999999885 68999999999999 9999999999999999999999999999998876
Q ss_pred c
Q 036427 526 R 526 (536)
Q Consensus 526 ~ 526 (536)
-
T Consensus 358 ~ 358 (365)
T 3s2u_A 358 L 358 (365)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-30 Score=263.31 Aligned_cols=338 Identities=19% Similarity=0.258 Sum_probs=235.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~ 223 (536)
|||++++.+. |||..++..|+++|.++ |++|.+++..... .. ....+.+ +...............
T Consensus 7 mkIl~~~~~~-gG~~~~~~~la~~L~~~---G~~V~v~~~~~~~--------~~--~~~~~~g~~~~~~~~~~~~~~~~~ 72 (364)
T 1f0k_A 7 KRLMVMAGGT-GGHVFPGLAVAHHLMAQ---GWQVRWLGTADRM--------EA--DLVPKHGIEIDFIRISGLRGKGIK 72 (364)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHTT---TCEEEEEECTTST--------HH--HHGGGGTCEEEECCCCCCTTCCHH
T ss_pred cEEEEEeCCC-ccchhHHHHHHHHHHHc---CCEEEEEecCCcc--------hh--hhccccCCceEEecCCccCcCccH
Confidence 8999999888 69999999999999998 7888777543210 00 0011111 1111000000000000
Q ss_pred chh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 224 QSN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 224 ~~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
... ..........++.+++++.+||+||++++........+++..+ +|++...++.. ....+|+.+.+|.+++.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 73 ALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLG----IPVVLHEQNGIAGLTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTT----CCEEEEECSSSCCHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcC----CCEEEEecCCCCcHHHHHHHHhCCEEEec
Confidence 000 0011222346778889999999999998654332233445444 88886666532 23446778899999998
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH-HHHHHHhhhcc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA-RALGNALYDEN 380 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l-~al~~~l~~~~ 380 (536)
++.. ++ ++.++|||+++..+.+.. .+++++++++.+++++++|+...++..+.+ +++ +.+.
T Consensus 149 ~~~~--------~~--~~~~i~n~v~~~~~~~~~----~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~-~~l~--- 210 (364)
T 1f0k_A 149 FPGA--------FP--NAEVVGNPVRTDVLALPL----PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVA-AKLG--- 210 (364)
T ss_dssp STTS--------SS--SCEECCCCCCHHHHTSCC----HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHH-HHHG---
T ss_pred Chhh--------cC--CceEeCCccchhhcccch----hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHH-HHhc---
Confidence 8654 23 578999999877654322 245677777777788888776654444433 433 3332
Q ss_pred cCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC--
Q 036427 381 LGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA-- 456 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~-- 456 (536)
. +.++++++|.++ ++.+.+++.++ ++|+|.|+++++.++|+.||++|+||||++++|||++|+|||+++.++
T Consensus 211 --~-~~~~l~i~G~~~~~~l~~~~~~~~~-~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 211 --D-SVTIWHQSGKGSQQSVEQAYAEAGQ-PQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp --G-GEEEEEECCTTCHHHHHHHHHHTTC-TTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred --C-CcEEEEEcCCchHHHHHHHHhhcCC-CceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 1 466677788875 34455555554 479999999999999999999999999999999999999999999865
Q ss_pred ccccCChhhHhhCCceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 457 GQEAGNVPYVVENGCGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++..++..+++.|.|.+++ | +++|+++|.++ |++.+++|++++++++..++++++++.++++++.
T Consensus 287 ~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 287 RQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARA 356 (364)
T ss_dssp CHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHH
Confidence 34445677899999988886 4 89999999998 5899999999999999999999999999998875
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=264.00 Aligned_cols=358 Identities=14% Similarity=0.089 Sum_probs=241.4
Q ss_pred CCCCCceEEEEeCC----------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccc
Q 036427 140 ENDQPKKVLILMSD----------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPL 209 (536)
Q Consensus 140 ~~~~~mKIL~~~~~----------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l 209 (536)
..++||||||++.. ..||+...+..|+++|.+. |++|.++............... .....
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~-------~~v~v 85 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ---GIEVDIYTRATRPSQGEIVRVA-------ENLRV 85 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT---TCEEEEEEECCCGGGCSEEEEE-------TTEEE
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc---CCEEEEEecCCCCCCccccccc-------CCeEE
Confidence 34677899999852 1389999999999999998 7788776543211000000000 00000
Q ss_pred cceeecCCCcccccchhhhhhhHHHHHHHHHH-HHhh-CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc
Q 036427 210 WKMTYYGTAPRVIHQSNFAATSTFIAREVAKG-LMKY-QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH 287 (536)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~-kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~ 287 (536)
....... ........... ....+.+.+.+. +++. +||+||++......+...+++..+ +|++...|+.....
T Consensus 86 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~p~v~~~h~~~~~~ 159 (438)
T 3c48_A 86 INIAAGP-YEGLSKEELPT-QLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWR----IPLIHTAHTLAAVK 159 (438)
T ss_dssp EEECCSC-SSSCCGGGGGG-GHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHT----CCEEEECSSCHHHH
T ss_pred EEecCCC-ccccchhHHHH-HHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcC----CCEEEEecCCcccc
Confidence 1100000 00000000000 111122334444 5555 499999986433222333444444 88887777653110
Q ss_pred ------------------cccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHcCC
Q 036427 288 ------------------PTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR--PKVELRRELGM 346 (536)
Q Consensus 288 ------------------~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~lgi 346 (536)
.+++.+.+|.++++|+..++.+.+ +|++..++.+++|+++...+.+.. ..+.+++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~ 239 (438)
T 3c48_A 160 NSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI 239 (438)
T ss_dssp SCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTC
T ss_pred cccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCC
Confidence 123457799999999999999887 788888999999999988765542 12348889999
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCC--CcEEEEEecC----CH---HHHHHHHcCCCCCCEEEecCh
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP--IGQVLVICGR----NK---KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~--~~~~lvi~G~----~~---~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++.++++++|+....|+...+++++..... ..| ++++ +++|. ++ ++.+.++++++.++|.+.|++
T Consensus 240 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~----~~p~~~~~l-~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~ 314 (438)
T 3c48_A 240 PLHTKVVAFVGRLQPFKGPQVLIKAVAALFD----RDPDRNLRV-IICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPR 314 (438)
T ss_dssp CSSSEEEEEESCBSGGGCHHHHHHHHHHHHH----HCTTCSEEE-EEECCBC------CHHHHHHHHTTCTTTEEEECCC
T ss_pred CCCCcEEEEEeeecccCCHHHHHHHHHHHHh----hCCCcceEE-EEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCC
Confidence 8888888899887777888877777765443 133 5665 44565 33 466677777888899999999
Q ss_pred --hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHH
Q 036427 418 --SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQW 488 (536)
Q Consensus 418 --~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~l 488 (536)
+++.++|+.||++|+|| | |++++|||++|+|||+++.++.. .+++ .+.|.+++ |+++++++|.++
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~------e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLP------IAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHH------HHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChh------HHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 68999999999999998 4 89999999999999999864433 3444 44677765 899999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ +++.+++|++++++.+.+++++++++.+.+++++
T Consensus 389 ~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 424 (438)
T 3c48_A 389 LD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYND 424 (438)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99 9999999999999988779999988888776654
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=279.68 Aligned_cols=366 Identities=13% Similarity=0.106 Sum_probs=244.7
Q ss_pred CCCCCCCceEEEEeCC--------------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-Cc-chhHHH
Q 036427 138 GIENDQPKKVLILMSD--------------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQ-LPRSYN 201 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~--------------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~-~~~~y~ 201 (536)
|++|.++||||+++.. ..||..+.+..|+++|.+. ||+|.|+........++. .. ... +.
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~~~~-~~ 76 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM---GVQVDIITRRIKDENWPEFSGEIDY-YQ 76 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT---TCEEEEEEECCCBTTBGGGCCSEEE-CT
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc---CCeEEEEeCCCCcccccchhhhHHh-cc
Confidence 5667778999999853 1379999999999999998 788877654221111000 00 000 00
Q ss_pred HHHhhccccceeecCCCcccccchhhhhhhHHHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE
Q 036427 202 FLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV 279 (536)
Q Consensus 202 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~ 279 (536)
.....+........ ...................+.+++++ .+||+||++......++..+++..+ +|++..
T Consensus 77 -~~~gv~v~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~----~p~v~~ 149 (499)
T 2r60_A 77 -ETNKVRIVRIPFGG--DKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG----LPFTFT 149 (499)
T ss_dssp -TCSSEEEEEECCSC--SSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHC----CCEEEE
T ss_pred -CCCCeEEEEecCCC--cCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcC----CcEEEE
Confidence 00000011110000 00000000011111223567778887 5899999987543333333445445 888877
Q ss_pred ecCCCCc----------------------c----cccccccCCEEEEcCHHHHHHHHHh---C-C----CCCCEEEeCCC
Q 036427 280 ITDLSTC----------------------H----PTWFHKLVTRCYCPTADVAKRAMKA---G-L----QASQIKVYGLP 325 (536)
Q Consensus 280 ~~d~~~~----------------------~----~~~~~~~~d~vi~~S~~~~~~l~~~---g-~----~~~ki~vignp 325 (536)
.|+.... . .+++.+.+|.++++|+..++.+.+. | + ++.++.+++|+
T Consensus 150 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ng 229 (499)
T 2r60_A 150 GHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPG 229 (499)
T ss_dssp CSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCC
T ss_pred ccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCC
Confidence 7765210 0 0234578999999999999987764 6 6 67899999999
Q ss_pred CCCCCCCCCCc---hHHHHHHcC-----CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC---
Q 036427 326 VRPSFVKPVRP---KVELRRELG-----MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--- 394 (536)
Q Consensus 326 v~~~~~~~~~~---~~~~r~~lg-----i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--- 394 (536)
++...+.+... +..++++++ ++++.++++++|+....|+...+++++...... .++...++++|.
T Consensus 230 vd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~----~~~~~~l~i~G~~~~ 305 (499)
T 2r60_A 230 VNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKEL----QDKANLVLTLRGIEN 305 (499)
T ss_dssp BCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHH----HHHCEEEEEESSCSB
T ss_pred cChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHh----CCCceEEEEECCCCC
Confidence 99887765432 356788888 777888999999887788888887777654321 122323556666
Q ss_pred ---------------CHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcE
Q 036427 395 ---------------NKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPI 449 (536)
Q Consensus 395 ---------------~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPV 449 (536)
..++.+.++++++.++|+|+|++ +++.++|+.| |++|+|| | |++++|||+||+||
T Consensus 306 ~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~Pv 385 (499)
T 2r60_A 306 PFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPA 385 (499)
T ss_dssp TTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCE
T ss_pred cccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCE
Confidence 22455666777888899999998 6999999999 9999998 4 89999999999999
Q ss_pred EEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhh
Q 036427 450 ILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i~~~i~~l~~~ 525 (536)
|+++.++.. +++..+ .|.+++ |+++++++|.++++ +++.+++|++++++.+.+ ++++++++.+.+++++
T Consensus 386 I~s~~~g~~------e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 386 VVTRNGGPA------EILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458 (499)
T ss_dssp EEESSBHHH------HHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHH
T ss_pred EEecCCCHH------HHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854333 345444 677775 89999999999999 999999999999998877 8898888888776654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-28 Score=253.57 Aligned_cols=345 Identities=14% Similarity=0.090 Sum_probs=243.6
Q ss_pred CCCCceEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 141 NDQPKKVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 141 ~~~~mKIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|+++|||++++... .||....+..|++.| + |++|.|+....... ....+ ..... .......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~---g~~v~v~~~~~~~~------~~~~~---~~~~~-~~~~~~~- 64 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D---PESIVVFASTQNAE------EAHAY---DKTLD-YEVIRWP- 64 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C---GGGEEEEEECSSHH------HHHHH---HTTCS-SEEEEES-
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--c---CCeEEEEECCCCcc------chhhh---ccccc-eEEEEcc-
Confidence 56789999998632 489999999999999 3 55665554322100 00011 11111 1100000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCce-EEEEecCCCCc---------c
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIV-FTTVITDLSTC---------H 287 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip-~v~~~~d~~~~---------~ 287 (536)
.... .........+.+++++.+||+||++.+........+++..+ +| ++...|+.... .
T Consensus 65 ~~~~-------~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~ 133 (394)
T 3okp_A 65 RSVM-------LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAG----ASKVIASTHGHEVGWSMLPGSRQS 133 (394)
T ss_dssp SSSC-------CSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTT----CSEEEEECCSTHHHHTTSHHHHHH
T ss_pred cccc-------ccchhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcC----CCcEEEEeccchhhhhhcchhhHH
Confidence 0000 01223456888899999999999987654433344456555 55 55555543210 0
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR--PKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
.+++.+.+|.++++|+..++.+.+.+.+..++.+++|+++...+.+.. .+..++++++++++.++++++|+....|+.
T Consensus 134 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 134 LRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp HHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCH
T ss_pred HHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCH
Confidence 134567899999999999999988655668999999999988776532 346788999999888999999998777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc--CCCCCCEEEecCh--hhHHHHHhhcCeEEECC-------
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS--TDWKIPVQVKGFV--SKMEEAMGACDCIITKA------- 434 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~--~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s------- 434 (536)
..+++++..... ..+++++ +++|.++. .+.+++ .++.++|++.|++ +++.++|+.||++|+||
T Consensus 214 ~~li~a~~~l~~----~~~~~~l-~i~G~g~~-~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~ 287 (394)
T 3okp_A 214 DSLIKAMPQVIA----ARPDAQL-LIVGSGRY-ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGL 287 (394)
T ss_dssp HHHHHHHHHHHH----HSTTCEE-EEECCCTT-HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGT
T ss_pred HHHHHHHHHHHh----hCCCeEE-EEEcCchH-HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccc
Confidence 877777765443 2466765 45576651 122221 3455799999999 79999999999999975
Q ss_pred ----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 435 ----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 435 ----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
+|++++|||++|+|||+++.++..+ +++.+.|.+++ |+++++++|.++++ +++.+++|++++++.+.
T Consensus 288 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e------~i~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 288 DVEGLGIVYLEAQACGVPVIAGTSGGAPE------TVTPATGLVVEGSDVDKLSELLIELLD-DPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp BCCSSCHHHHHHHHTTCCEEECSSTTGGG------GCCTTTEEECCTTCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred cccccCcHHHHHHHcCCCEEEeCCCChHH------HHhcCCceEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 2789999999999999998655443 55556777776 99999999999999 99999999999999887
Q ss_pred C-chHHHHHHHHHHHHhh
Q 036427 509 P-DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 509 ~-~~~~~i~~~i~~l~~~ 525 (536)
+ ++++++++.+.+++++
T Consensus 361 ~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 361 AEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHTBHHHHHHHHHHHHHS
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 6 8999999999999986
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-28 Score=251.28 Aligned_cols=349 Identities=11% Similarity=0.100 Sum_probs=245.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccC-CCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHT-PWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~-~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
++.||........||....+..|+++|.++ |++|.++....... ......+. ....+... + ..
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~i~------~~~~~~~~--~-----~~ 77 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAER---GHEIHFITSGLPFRLNKVYPNIY------FHEVTVNQ--Y-----SV 77 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHT---TCEEEEECSSCC----CCCTTEE------EECCCCC-----------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhC---CCEEEEEeCCCCCcccccCCceE------EEeccccc--c-----cc
Confidence 345676665444489999999999999998 88888775422100 00000000 00000000 0 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHc-CCCCCceEEEEecCCCC----c------cccc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAK-GLLKKIVFTTVITDLST----C------HPTW 290 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~-g~~~~ip~v~~~~d~~~----~------~~~~ 290 (536)
... ..........+.+++++.+||+||++.+........++++. + .++|++...|+... . ..++
T Consensus 78 ~~~---~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~ 152 (394)
T 2jjm_A 78 FQY---PPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIG--ERIKIVTTLHGTDITVLGSDPSLNNLIRF 152 (394)
T ss_dssp CCS---CCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT--TCSEEEEECCHHHHHTTTTCTTTHHHHHH
T ss_pred ccc---ccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhc--CCCCEEEEEecCcccccCCCHHHHHHHHH
Confidence 000 01223344678888999999999998765433333333332 2 13898877775210 0 1134
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
..+.+|.++++|+..++.+.+.+..+.++.+++|+++...+.+. +...++++++++++.++++++|+....|+...+++
T Consensus 153 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~ 231 (394)
T 2jjm_A 153 GIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQ 231 (394)
T ss_dssp HHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCC-CCHHHHHHTTCC---CEEEEECCCCGGGTHHHHHH
T ss_pred HHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCc-chHHHHHHcCCCCCCeEEEEeeccccccCHHHHHH
Confidence 46789999999999999998875556789999999998877654 35678889999888889999998877788888777
Q ss_pred HHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHH
Q 036427 371 ALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAM 443 (536)
Q Consensus 371 al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAm 443 (536)
++..... .+++++ +++|.++ ++.+.++++++.++|++.|+.+++.++|+.||++|+|| | |++++|||
T Consensus 232 a~~~l~~-----~~~~~l-~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAm 305 (394)
T 2jjm_A 232 AFAKIVT-----EVDAKL-LLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAM 305 (394)
T ss_dssp HHHHHHH-----SSCCEE-EEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHH
T ss_pred HHHHHHh-----hCCCEE-EEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHH
Confidence 7765443 245654 5567664 45666777777789999999999999999999999998 3 89999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLH 520 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~ 520 (536)
++|+|||+++.++..+. +.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+ +.++++++++.+.
T Consensus 306 a~G~PvI~~~~~~~~e~-----v~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 379 (394)
T 2jjm_A 306 ACGVPCIGTRVGGIPEV-----IQHGDTGYLCEVGDTTGVADQAIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYE 379 (394)
T ss_dssp HTTCCEEEECCTTSTTT-----CCBTTTEEEECTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred hcCCCEEEecCCChHHH-----hhcCCceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999997654442 33445677776 99999999999999 9999999999999988 7799999999999
Q ss_pred HHHhh
Q 036427 521 ELVRQ 525 (536)
Q Consensus 521 ~l~~~ 525 (536)
+++++
T Consensus 380 ~~~~~ 384 (394)
T 2jjm_A 380 TIYYD 384 (394)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=250.38 Aligned_cols=362 Identities=15% Similarity=0.064 Sum_probs=242.2
Q ss_pred CCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-Ccch---h--HHHH---HHhhccc
Q 036427 143 QPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLP---R--SYNF---LVKHGPL 209 (536)
Q Consensus 143 ~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~---~--~y~~---~~~~~~l 209 (536)
++||||+++.. ..||....+..|+++|.++ ||+|.|+........... ..+. . .... .....+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL---GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT---TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC---CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceE
Confidence 46999999843 3389999999999999999 788877653221110000 0000 0 0000 0000000
Q ss_pred cceeec-CCCccccc--chhhhhhhHHHHHHHHHHHHhh-----CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec
Q 036427 210 WKMTYY-GTAPRVIH--QSNFAATSTFIAREVAKGLMKY-----QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 210 ~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~-----kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~ 281 (536)
+..... ........ ...+......+.+.+.+++++. +||+||++......++..+.+..+ +|++...|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~----~~~v~~~h 153 (439)
T 3fro_A 78 YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK----IPAVFTIH 153 (439)
T ss_dssp EEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHC----CCEEEEES
T ss_pred EEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccC----CCEEEEec
Confidence 000000 00000000 0000111222334455555544 999999997654444444445444 89888888
Q ss_pred CCCCc----------------------ccccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC---
Q 036427 282 DLSTC----------------------HPTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR--- 335 (536)
Q Consensus 282 d~~~~----------------------~~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~--- 335 (536)
+.... ..++..+.+|.++++|+..++.... ++.+..++.+++|+++.+.+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~ 233 (439)
T 3fro_A 154 RLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTG 233 (439)
T ss_dssp CCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCS
T ss_pred ccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccc
Confidence 76421 0122346799999999999887443 246788999999999998776541
Q ss_pred ----chHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHhhhcccCC--CCcEEEEEecCCH-H----HHHHHH
Q 036427 336 ----PKVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNALYDENLGE--PIGQVLVICGRNK-K----LANKLL 403 (536)
Q Consensus 336 ----~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l~~~~~~~--~~~~~lvi~G~~~-~----l~~~l~ 403 (536)
.++.++++++++++ ++++++|+.. ..|+...+++++..... .. +++++ +++|.++ + +.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~----~~~~~~~~l-~i~G~g~~~~~~~l~~~~~ 307 (439)
T 3fro_A 234 SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSS----KKEFQEMRF-IIIGKGDPELEGWARSLEE 307 (439)
T ss_dssp CHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHT----SGGGGGEEE-EEECCCCHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHh----cccCCCeEE-EEEcCCChhHHHHHHHHHh
Confidence 34678889999887 8888898887 78888888877765442 12 56665 5567664 2 233344
Q ss_pred cCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-
Q 036427 404 STDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK- 476 (536)
Q Consensus 404 ~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~- 476 (536)
+.+ ..+.+.|++ +++.++|+.||++|+|| | |++++|||+||+|||+++.++ ..++++.+.|.+++
T Consensus 308 ~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~------~~e~~~~~~g~~~~~ 379 (439)
T 3fro_A 308 KHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG------LRDIITNETGILVKA 379 (439)
T ss_dssp HCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTH------HHHHCCTTTCEEECT
T ss_pred hcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCC------cceeEEcCceEEeCC
Confidence 444 677889976 57999999999999998 4 899999999999999998543 33466667888776
Q ss_pred -CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 -SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 -d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.++++++++.+++|++++++.++.++++.+++.+.+++++
T Consensus 380 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 380 GDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Confidence 9999999999999756889999999999998889999999999999886
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-27 Score=244.87 Aligned_cols=343 Identities=15% Similarity=0.121 Sum_probs=231.4
Q ss_pred CCCCCCceEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeec
Q 036427 139 IENDQPKKVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYY 215 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~ 215 (536)
..+.+||||||++.. ..||....+..++++|.+. |++|.++.........+.... .....+...+.
T Consensus 15 ~~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 83 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA---GHEVSVLAPASPHVKLPDYVV--------SGGKAVPIPYN 83 (406)
T ss_dssp ------CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT---TCEEEEEESCCTTSCCCTTEE--------ECCCCC-----
T ss_pred ccCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC---CCeEEEEecCCccccCCcccc--------cCCcEEecccc
Confidence 334567999999854 3389999999999999998 788877654332211110000 00000110000
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-------
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP------- 288 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~------- 288 (536)
.. ... ..........+.+++++.+||+||++.+........+++..+ +|++...++......
T Consensus 84 ~~----~~~---~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~ 152 (406)
T 2gek_A 84 GS----VAR---LRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE----GPIVATFHTSTTKSLTLSVFQG 152 (406)
T ss_dssp --------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE----SSEEEEECCCCCSHHHHHHHHS
T ss_pred CC----ccc---ccccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcC----CCEEEEEcCcchhhhhHHHHHH
Confidence 00 000 001122335778889999999999988665444344455444 788877776532111
Q ss_pred --ccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-CCCCcH
Q 036427 289 --TWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-EGMGPI 365 (536)
Q Consensus 289 --~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~g~k~~ 365 (536)
.+..+.+|.++++|+..++.+.+. ++..++ +++|+++...+.+.... .++.++.+.++++|+. ...|+.
T Consensus 153 ~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~-vi~~~v~~~~~~~~~~~------~~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 153 ILRPYHEKIIGRIAVSDLARRWQMEA-LGSDAV-EIPNGVDVASFADAPLL------DGYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp TTHHHHTTCSEEEESSHHHHHHHHHH-HSSCEE-ECCCCBCHHHHHTCCCC------TTCSCSSCEEEEESCTTSGGGCH
T ss_pred HHHHHHhhCCEEEECCHHHHHHHHHh-cCCCcE-EecCCCChhhcCCCchh------hhccCCCeEEEEEeeeCccccCH
Confidence 144678999999999999988763 345678 99999987644332211 1233355788889888 777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHH--HHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC----C-h
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKK--LANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA----G-P 436 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~--l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s----G-~ 436 (536)
..+++++..... ..+++++ +++|.++. +.+.++++ .++|++.|+++ ++.++|+.||++|+|| | |
T Consensus 225 ~~li~a~~~l~~----~~~~~~l-~i~G~~~~~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~ 297 (406)
T 2gek_A 225 AVLLAALPKLVA----RFPDVEI-LIVGRGDEDELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFG 297 (406)
T ss_dssp HHHHHHHHHHHT----TSTTCEE-EEESCSCHHHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSC
T ss_pred HHHHHHHHHHHH----HCCCeEE-EEEcCCcHHHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCc
Confidence 887777765433 2467765 45576653 33333333 57899999995 6799999999999997 2 8
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
++++|||++|+|||+++.++ ...+++ ...|.++ .|+++++++|.++++ +++.+++|++++++++..++++
T Consensus 298 ~~~~Ea~a~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 298 IVLVEAMAAGTAVVASDLDA------FRRVLADGDAGRLVPVDDADGMAAALIGILE-DDQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHTCEEEECCCHH------HHHHHTTTTSSEECCTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHGGGGBHH
T ss_pred hHHHHHHHcCCCEEEecCCc------HHHHhcCCCceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999998633 233454 4567777 499999999999999 9999999999999998889999
Q ss_pred HHHHHHHHHHhh
Q 036427 514 RIVQDLHELVRQ 525 (536)
Q Consensus 514 ~i~~~i~~l~~~ 525 (536)
++++.+.+++++
T Consensus 371 ~~~~~~~~~~~~ 382 (406)
T 2gek_A 371 VVSAQIMRVYET 382 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999888875
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=247.84 Aligned_cols=346 Identities=14% Similarity=0.097 Sum_probs=232.8
Q ss_pred CCCCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCc
Q 036427 141 NDQPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAP 219 (536)
Q Consensus 141 ~~~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~ 219 (536)
.+++|||++++.. .+||+.+.+..|++.|.+. ||+|.+........ ...............+.+.
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~---G~~v~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------- 102 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSI---GIEARWFVIEGPTE---FFNVTKTFHNALQGNESLK-------- 102 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHT---TCEEEEEECCCCHH---HHHHHHHHHHHHTTCCSCC--------
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhC---CCeEEEEEccCCcc---hhhhhcccceeeccccccc--------
Confidence 3567999999865 3589999999999999998 77886654322100 0000000000000000000
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-------cccc
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP-------TWFH 292 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~-------~~~~ 292 (536)
.... .........+.+.+++++.+||+||++.+....+. .+ ... .+|++...|+...... .++.
T Consensus 103 --~~~~-~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~---~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~ 173 (416)
T 2x6q_A 103 --LTEE-MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI-EF---YEK--KSPWLWRCHIDLSSPNREFWEFLRRFV 173 (416)
T ss_dssp --CCHH-HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGG-GG---SCC--CSCEEEECCSCCSSCCHHHHHHHHHHH
T ss_pred --ccHH-HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHH-HH---HHh--cCCEEEEEccccCCccHHHHHHHHHHH
Confidence 0000 00011122345566677889999999986543321 11 111 2788766664332111 1234
Q ss_pred ccCCEEEE-cCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC----chHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 293 KLVTRCYC-PTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR----PKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 293 ~~~d~vi~-~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~----~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
..+|.+++ .|+...+ +++..++.+++|+++...+.+.. ....++++++++++.++++++|+....|+...
T Consensus 174 ~~~~~~i~~~s~~~~~-----~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~ 248 (416)
T 2x6q_A 174 EKYDRYIFHLPEYVQP-----ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFD 248 (416)
T ss_dssp TTSSEEEESSGGGSCT-----TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHH
T ss_pred HhCCEEEEechHHHHh-----hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHH
Confidence 56677664 5544332 45567899999999976554321 23567889999988899999999888888888
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCCEEEecChh-----hHHHHHhhcCeEEECC
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIPVQVKGFVS-----KMEEAMGACDCIITKA 434 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v~-----~l~~ll~~aDv~V~~s 434 (536)
+++++..... ..+++++ +++|.++ .+.+..++.+..++|+|+|+++ ++.++|+.||++|+||
T Consensus 249 li~a~~~l~~----~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps 323 (416)
T 2x6q_A 249 VIEIYRKVKE----KIPGVQL-LLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS 323 (416)
T ss_dssp HHHHHHHHHH----HCTTCEE-EEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECC
T ss_pred HHHHHHHHHH----hCCCeEE-EEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECC
Confidence 8877765543 2467765 4556652 2344455567778999999774 8999999999999998
Q ss_pred ---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-C
Q 036427 435 ---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-P 509 (536)
Q Consensus 435 ---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~ 509 (536)
| |++++|||++|+|||+++.++..+ .+.+.+.|.+++|+++++++|..+++ |++.+++|++++++.+. .
T Consensus 324 ~~E~~~~~~lEAma~G~PvI~~~~~g~~e-----~i~~~~~g~l~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~ 397 (416)
T 2x6q_A 324 IREGFGLTVTEAMWKGKPVIGRAVGGIKF-----QIVDGETGFLVRDANEAVEVVLYLLK-HPEVSKEMGAKAKERVRKN 397 (416)
T ss_dssp SSCSSCHHHHHHHHTTCCEEEESCHHHHH-----HCCBTTTEEEESSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCccHHHHHHHcCCCEEEccCCCChh-----heecCCCeEEECCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHH
Confidence 3 899999999999999998643222 23344578888899999999999999 99999999999999876 6
Q ss_pred chHHHHHHHHHHHHhh
Q 036427 510 DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 510 ~~~~~i~~~i~~l~~~ 525 (536)
++++++++.+.+++++
T Consensus 398 fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 398 FIITKHMERYLDILNS 413 (416)
T ss_dssp TBHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHH
Confidence 8999999999998875
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-25 Score=235.51 Aligned_cols=336 Identities=13% Similarity=0.140 Sum_probs=229.4
Q ss_pred ceEEEEeC--CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchh-HHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMS--DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPR-SYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~--~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~-~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|||+|++. ..+||..+.+..|+++|.+. |+|.+++...... ........ ......... .+. +.
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~----~~V~v~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~-------~~- 66 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA----HEVIVFGIHAFGR-SVHANIEEFDAQTAEHVR-GLN-------EQ- 66 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT----SEEEEEEESCCSC-CSCSSSEEEEHHHHHHHT-TCC-------ST-
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc----CCeEEEeecCCCc-ccccccccCCcccccccc-ccc-------cc-
Confidence 89999974 45589999999999999986 4555554322210 11111110 000000000 000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---cccccccccCC--
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---CHPTWFHKLVT-- 296 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---~~~~~~~~~~d-- 296 (536)
.+....+.+.+++.+||+||++.... .....+.+..+.....+.+...+.... ...+++.+.+|
T Consensus 67 ----------~~~~~~l~~~l~~~~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (413)
T 3oy2_A 67 ----------GFYYSGLSEFIDVHKPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVV 135 (413)
T ss_dssp ----------TCCHHHHHHHHHHHCCSEEEEEECHH-HHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTTEE
T ss_pred ----------cchHHHHHHHHHhcCCCEEEEcchHH-HHHHHHHHhccCCCCCceeeeccccchhhHHHHHHHHhccCCc
Confidence 01112556778899999999984322 222222333332111233333333221 11256778877
Q ss_pred EEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 297 RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 297 ~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
.++++|+..++.+.+++. +.++.+++|+++...+ ...++++++++ +.++++++|+....|+...+++++..
T Consensus 136 ~ii~~S~~~~~~~~~~~~-~~~~~vi~ngvd~~~~------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~ 208 (413)
T 3oy2_A 136 GVMAMSKCWISDICNYGC-KVPINIVSHFVDTKTI------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAAR 208 (413)
T ss_dssp EEEESSTHHHHHHHHTTC-CSCEEECCCCCCCCCC------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHH
T ss_pred eEEEcCHHHHHHHHHcCC-CCceEEeCCCCCHHHH------HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHH
Confidence 999999999999999887 6889999999998766 24567788877 77888888887777888888888776
Q ss_pred HhhhcccCCCCcEEEEEecCC---------HHHHHHHHcCCCCCC-------EEEecChh--hHHHHHhhcCeEEECC--
Q 036427 375 ALYDENLGEPIGQVLVICGRN---------KKLANKLLSTDWKIP-------VQVKGFVS--KMEEAMGACDCIITKA-- 434 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~---------~~l~~~l~~~~~~~~-------V~~~G~v~--~l~~ll~~aDv~V~~s-- 434 (536)
... ..++++++++ |.+ ..+.+.+++.++.++ +.+.|+++ ++.++|+.||++|+||
T Consensus 209 l~~----~~~~~~l~iv-G~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~ 283 (413)
T 3oy2_A 209 FIS----KYPDAKVRFL-CNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSG 283 (413)
T ss_dssp HHH----HCTTCCEEEE-EECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSC
T ss_pred HHH----hCCCcEEEEE-eCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCc
Confidence 443 2567776554 443 334455556677776 88889974 9999999999999998
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc----------------ee--ecC--CHHHHHHHHHHHhCCC
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC----------------GK--FSK--SPKEIANMVSQWFGPK 492 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~----------------g~--~~~--d~~~La~~I~~ll~~d 492 (536)
| |++++|||++|+|||+++.++.. ++++.+. |. ++. |+++++++| ++++ +
T Consensus 284 E~~~~~~lEAma~G~PvI~s~~~g~~------e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~-~ 355 (413)
T 3oy2_A 284 EGFGLCSAEGAVLGKPLIISAVGGAD------DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK-D 355 (413)
T ss_dssp CSSCHHHHHHHTTTCCEEEECCHHHH------HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT-S
T ss_pred CCCCcHHHHHHHcCCCEEEcCCCChH------HHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhc-C
Confidence 3 89999999999999999965433 3444433 44 553 999999999 9999 9
Q ss_pred HHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 493 IDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 493 ~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++.+++|++++++.+ +.++++++++.+.+++++
T Consensus 356 ~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 356 EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999987 468999999999888775
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-27 Score=241.51 Aligned_cols=351 Identities=15% Similarity=0.123 Sum_probs=222.8
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|+++|||++++... ++...+..++++|.+. ++++++.++..... . ........ .......+...... +.
T Consensus 5 m~~~mkIl~v~~~~--~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~--~~~~~~~~-~~~~~~~~~~~~~~--~~ 73 (375)
T 3beo_A 5 MTERLKVMTIFGTR--PEAIKMAPLVLELQKH-PEKIESIVTVTAQH---R--QMLDQVLS-IFGITPDFDLNIMK--DR 73 (375)
T ss_dssp CSSCEEEEEEECSH--HHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---S--HHHHHHHH-HHTCCCSEECCCCC--TT
T ss_pred CCcCceEEEEecCc--HHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---H--HHHHHHHH-HcCCCCccccccCC--Cc
Confidence 45569999998654 5556677889999886 43477755432111 0 00000000 00110000100000 00
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC--c---ccc-----
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST--C---HPT----- 289 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~--~---~~~----- 289 (536)
............++.+++++++||+||++++....++ ..+++..+ +|++.+.+.... . ...
T Consensus 74 ----~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~----ip~v~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T 3beo_A 74 ----QTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQ----IPVGHVEAGLRTWDKYSPYPEEMNRQ 145 (375)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTT----CCEEEESCCCCCSCTTSSTTHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHC----CCEEEEecccccccccCCChhHhhhh
Confidence 0001112233457888999999999999876433322 23344444 888866554311 0 111
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCC-CCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCC-C-CcH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLP-VRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEG-M-GPI 365 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignp-v~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g-~-k~~ 365 (536)
++.+.+|.++++|+..++.+.+.|++++++.++||+ ++...+.+.. .+.++++++ + +.+++++++|... . |+.
T Consensus 146 ~~~~~~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~gr~~~~~K~~ 222 (375)
T 3beo_A 146 LTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTAHRRENLGEPM 222 (375)
T ss_dssp HHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEECCCGGGTTHHH
T ss_pred HHhhhhheeeCCCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEecccccchhHH
Confidence 133459999999999999998889888899999999 5543322211 223455554 2 3445555555433 2 555
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEA 442 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEA 442 (536)
..+++++..... ..+++++++..|...++.+.+++. ...++|+|+|++ .++.++|+.||++|++|| ++++||
T Consensus 223 ~~li~a~~~l~~----~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA 297 (375)
T 3beo_A 223 RNMFRAIKRLVD----KHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEA 297 (375)
T ss_dssp HHHHHHHHHHHH----HCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHH
T ss_pred HHHHHHHHHHHh----hCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHH
Confidence 556666554332 245676544334334444555443 333689997776 389999999999999995 569999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
|++|+|||+++..++ ..++++.|.|.++ .|+++|+++|.++++ |++.+++|+++++++...++++++++.+.+
T Consensus 298 ~a~G~Pvi~~~~~~~-----~~e~v~~g~g~~v~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 298 PSLGVPVLVLRDTTE-----RPEGIEAGTLKLAGTDEETIFSLADELLS-DKEAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHTCCEEECSSCCS-----CHHHHHTTSEEECCSCHHHHHHHHHHHHH-CHHHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HhcCCCEEEecCCCC-----CceeecCCceEEcCCCHHHHHHHHHHHHh-ChHhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999999964222 2346778888887 499999999999999 999999999999988888999999999998
Q ss_pred HHh
Q 036427 522 LVR 524 (536)
Q Consensus 522 l~~ 524 (536)
+++
T Consensus 372 ~~~ 374 (375)
T 3beo_A 372 HFN 374 (375)
T ss_dssp HTT
T ss_pred Hhh
Confidence 765
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=247.95 Aligned_cols=353 Identities=17% Similarity=0.125 Sum_probs=227.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.. .+...+..|+++|+++.+++++|+++..... ...... ...+..+.......... .
T Consensus 1 mkIl~v~~~~--~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~---~ 65 (384)
T 1vgv_A 1 MKVLTVFGTR--PEAIKMAPLVHALAKDPFFEAKVCVTAQHRE-------MLDQVL---KLFSIVPDYDLNIMQPG---Q 65 (384)
T ss_dssp CEEEEEECSH--HHHHHHHHHHHHHHHSTTCEEEEEECCSSGG-------GGHHHH---HHHTCCCSEECCCCSTT---S
T ss_pred CeEEEEeccc--HHHHHHHHHHHHHHhCCCCceEEEEcCCCHH-------HHHHHH---HHcCCCCCcceecCCCC---c
Confidence 7999987654 4456678999999998112444444321110 000111 01110000000000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCc----------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTC----------HPTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~~~~ 293 (536)
... .........+.+++++++||+||++++.....+. .+++.. ++|++.+.++.... ...++.+
T Consensus 66 ~~~-~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~----~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (384)
T 1vgv_A 66 GLT-EITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQ----RIPVGHVEAGLRTGDLYSPWPEEANRTLTGH 140 (384)
T ss_dssp CHH-HHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTT----TCCEEEESCCCCCSCTTSSTTHHHHHHHHHT
T ss_pred cHH-HHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHH----CCCEEEEecccccccccCCCchHhhHHHHHh
Confidence 010 1122334678889999999999998763322232 233333 38988777654211 0122356
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC-------chHHHHHHcC-CCCCCCEEEEecCCCC-C-C
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR-------PKVELRRELG-MDEDLPAVLLMGGGEG-M-G 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~-------~~~~~r~~lg-i~~~~~~il~~gg~~g-~-k 363 (536)
.+|.++++|+..++.+.+.|++++++.++|||+.+....... .+.+++++++ ++++.+++++++|... . +
T Consensus 141 ~~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k 220 (384)
T 1vgv_A 141 LAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (384)
T ss_dssp TCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH
T ss_pred hccEEEcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch
Confidence 799999999999999988899888999999995432211100 0124566777 7555565555555433 3 4
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHH
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tll 440 (536)
+...+++++..... ..++++++++.|.++++.+.+++. +..++|+|+|++ +++.++|+.||++|++||+ +++
T Consensus 221 g~~~li~a~~~l~~----~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~-~~l 295 (384)
T 1vgv_A 221 GFEEICHALADIAT----THQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGG-IQE 295 (384)
T ss_dssp HHHHHHHHHHHHHH----HCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSST-GGG
T ss_pred HHHHHHHHHHHHHh----hCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECCcc-hHH
Confidence 55556666654432 135677766667665444444432 224689996654 5899999999999999964 488
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
|||++|+|||+++..+ +..++++.|.|.+++ |+++|+++|.++++ |++.+++|+++++++...++++++++.+
T Consensus 296 EA~a~G~PvI~~~~~~-----~~~e~v~~g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~~ 369 (384)
T 1vgv_A 296 EAPSLGKPVLVMRDTT-----ERPEAVTAGTVRLVGTDKQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEAL 369 (384)
T ss_dssp TGGGGTCCEEEESSCC-----SCHHHHHHTSEEEECSSHHHHHHHHHHHHH-CHHHHHHHHSSCCTTCCSCHHHHHHHHH
T ss_pred HHHHcCCCEEEccCCC-----CcchhhhCCceEEeCCCHHHHHHHHHHHHh-ChHHHhhhhhccCCCcCCCHHHHHHHHH
Confidence 9999999999998633 233467778888885 99999999999999 9999999999999998889999999999
Q ss_pred HHHHhhcCC
Q 036427 520 HELVRQRNF 528 (536)
Q Consensus 520 ~~l~~~~~~ 528 (536)
.+++++..+
T Consensus 370 ~~~~~~~~~ 378 (384)
T 1vgv_A 370 KNNRISLGS 378 (384)
T ss_dssp HHTCCCC--
T ss_pred HHHHHhhcc
Confidence 998877544
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=249.78 Aligned_cols=337 Identities=14% Similarity=0.149 Sum_probs=233.3
Q ss_pred ceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 145 KKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++++.. ..||..+.+..|+++|.++ ||+|.++...... ..+ .++ +...... ...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~-~~~-~~~-----------~v~~~~~----~~~- 59 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR---GHHVRVYTQSWEG-DCP-KAF-----------ELIQVPV----KSH- 59 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHT---TCCEEEEESEECS-CCC-TTC-----------EEEECCC----CCS-
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhC---CCeEEEEecCCCC-CCC-CCc-----------EEEEEcc----Ccc-
Confidence 799999753 2379999999999999998 7778766543211 000 000 0000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccc----------hHHHHHHHHcCCCCCceEEEEecCCCCc------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQ----------HVPLRILRAKGLLKKIVFTTVITDLSTC------ 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~----------~i~~~~~~~~g~~~~ip~v~~~~d~~~~------ 286 (536)
............+.+++++.+||+||++..... .++.. ....+. . ......
T Consensus 60 ---~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~-----~~~~~~~~~~~~ 126 (374)
T 2iw1_A 60 ---TNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKV-AQEKGF----L-----YRLTSRYRHYAA 126 (374)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHH-HHHCCH----H-----HHTSHHHHHHHH
T ss_pred ---cchhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceee-eecccc----h-----hhhcHHHHHHHH
Confidence 000112234457788899999999999763211 11111 010110 0 000000
Q ss_pred cccccc--ccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC---chHHHHHHcCCCCCCCEEEEecCCC
Q 036427 287 HPTWFH--KLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR---PKVELRRELGMDEDLPAVLLMGGGE 360 (536)
Q Consensus 287 ~~~~~~--~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~---~~~~~r~~lgi~~~~~~il~~gg~~ 360 (536)
..++.. +.+|.++++|+..++.+.+ +|++..++.+++|+++.+.+.+.. .++.++++++++++.++++++|+..
T Consensus 127 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 206 (374)
T 2iw1_A 127 FERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDF 206 (374)
T ss_dssp HHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCT
T ss_pred HHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccch
Confidence 001111 3689999999999999887 588888999999999987665432 2457889999988888899999888
Q ss_pred CCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----
Q 036427 361 GMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---- 434 (536)
Q Consensus 361 g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---- 434 (536)
..|+...+++++...... ..+++++ +++|.++ ++.+.+++.++.++|+++|+.+++.++|+.||++|+||
T Consensus 207 ~~K~~~~li~a~~~l~~~---~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~ 282 (374)
T 2iw1_A 207 GRKGVDRSIEALASLPES---LRHNTLL-FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEA 282 (374)
T ss_dssp TTTTHHHHHHHHHTSCHH---HHHTEEE-EEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCS
T ss_pred hhcCHHHHHHHHHHhHhc---cCCceEE-EEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCC
Confidence 778888777766543220 0135655 4556553 55666677777789999999999999999999999998
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCch
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK---SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDA 511 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~ 511 (536)
+|++++|||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+.++.
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~e-----~i~~~~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~ 356 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYAH-----YIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQD 356 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTTH-----HHHHHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSC
T ss_pred cccHHHHHHHCCCCEEEecCCCchh-----hhccCCceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhh
Confidence 3899999999999999999754333 366667888775 89999999999999 99999999999999888877
Q ss_pred HHHHHHHHHHHHhh
Q 036427 512 VFRIVQDLHELVRQ 525 (536)
Q Consensus 512 ~~~i~~~i~~l~~~ 525 (536)
++.+++.+.+++++
T Consensus 357 ~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 357 LYSLPEKAADIITG 370 (374)
T ss_dssp CSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888877765
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-26 Score=243.00 Aligned_cols=265 Identities=14% Similarity=0.079 Sum_probs=194.0
Q ss_pred HhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c----------c------------------cccc
Q 036427 243 MKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H----------P------------------TWFH 292 (536)
Q Consensus 243 ~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~----------~------------------~~~~ 292 (536)
++.+||+||++......++..+.+. .. .++|++...|+.... . + ++..
T Consensus 127 ~~~~~DiIh~~~~~~~~~~~~~~~~-~~-~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 127 PGWRPDMVHAHDWQAAMTPVYMRYA-ET-PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SSCCCSEEEEEHHHHTTHHHHHHHS-SS-CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred cCCCCCEEEecccchhHHHHHHhhc-cc-CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 4679999999874433333333332 11 238988877775310 0 0 1224
Q ss_pred ccCCEEEEcCHHHHHHHHH--hC--------CCCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHc
Q 036427 293 KLVTRCYCPTADVAKRAMK--AG--------LQASQIKVYGLPVRPSFVKPVRP------------------KVELRREL 344 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~--~g--------~~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~l 344 (536)
+.+|.++++|+..++.+.+ +| .++.++.+++|+++.+.+.+..+ +..+++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 6789999999999998765 24 36689999999999887765432 46788899
Q ss_pred CCCCC-CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHcCCCCCCEE-EecCh
Q 036427 345 GMDED-LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLSTDWKIPVQ-VKGFV 417 (536)
Q Consensus 345 gi~~~-~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~~~~~~~V~-~~G~v 417 (536)
+++++ .++++++|+....|+...+++++..... +++++ +++|.++ .+.+..+++ ..+|+ +.|+.
T Consensus 285 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-~ivG~g~~~~~~~l~~~~~~~--~~~v~~~~g~~ 355 (485)
T 1rzu_A 285 RIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS------LGGRL-VVLGAGDVALEGALLAAASRH--HGRVGVAIGYN 355 (485)
T ss_dssp TCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH------TTCEE-EEEECBCHHHHHHHHHHHHHT--TTTEEEEESCC
T ss_pred CCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh------cCceE-EEEeCCchHHHHHHHHHHHhC--CCcEEEecCCC
Confidence 99875 6788888888778888887777765432 35665 4456653 223333333 36887 79997
Q ss_pred hh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC----------CceeecC--CHHH
Q 036427 418 SK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN----------GCGKFSK--SPKE 480 (536)
Q Consensus 418 ~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~----------g~g~~~~--d~~~ 480 (536)
++ +.++|+.||++|+|| | |++++|||+||+|||+++.++. .+++++ +.|.+++ |+++
T Consensus 356 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~------~e~v~~~~~~~~~~~~~~G~l~~~~d~~~ 429 (485)
T 1rzu_A 356 EPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL------ADTVIDANHAALASKAATGVQFSPVTLDG 429 (485)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHH------HHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred HHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCCh------hheecccccccccccCCcceEeCCCCHHH
Confidence 54 489999999999998 4 8999999999999999986433 335555 4677775 8999
Q ss_pred HHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 481 IANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 481 La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
|+++|.+++ + |++.+++|++++++ +.++++++++.+.+++++-.
T Consensus 430 la~~i~~ll~~~~-~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 430 LKQAIRRTVRYYH-DPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 999999999 8 99999999999975 78999999999999887643
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-25 Score=240.68 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=197.4
Q ss_pred HHHHHHHHh----hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--cc---------------------
Q 036427 236 REVAKGLMK----YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--HP--------------------- 288 (536)
Q Consensus 236 ~~l~~~l~~----~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~~--------------------- 288 (536)
..+.++++. .+||+||++......++..+..+. .++|++...|+.... .+
T Consensus 115 ~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~---~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
T 2qzs_A 115 WVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG---RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEF 191 (485)
T ss_dssp HHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEE
T ss_pred HHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhcc---CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccc
Confidence 455566663 799999999854433333333111 248998877765310 00
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHH--hCCC--------C--CCEEEeCCCCCCCCCCCCCc-------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMK--AGLQ--------A--SQIKVYGLPVRPSFVKPVRP------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~--~g~~--------~--~ki~vignpv~~~~~~~~~~------------- 336 (536)
++..+.+|.++++|+..++.+.+ +|.. + .++.+++|+++.+.+.+...
T Consensus 192 ~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T 2qzs_A 192 NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLE 271 (485)
T ss_dssp TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGG
T ss_pred cccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchh
Confidence 11246789999999999988764 3432 2 78999999999887765432
Q ss_pred -----hHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHc
Q 036427 337 -----KVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLS 404 (536)
Q Consensus 337 -----~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~ 404 (536)
+..+++++++++ +.++++++|+....|+...+++++..... ++++++ ++|.++ .+.+..++
T Consensus 272 ~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l~-ivG~g~~~~~~~l~~~~~~ 344 (485)
T 2qzs_A 272 DKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE------QGGQLA-LLGAGDPVLQEGFLAAAAE 344 (485)
T ss_dssp GGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH------TTCEEE-EEEEECHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh------CCcEEE-EEeCCchHHHHHHHHHHHh
Confidence 467888999986 67889999988778888888877765432 356654 445553 23333344
Q ss_pred CCCCCCEE-EecChhh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---------
Q 036427 405 TDWKIPVQ-VKGFVSK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN--------- 469 (536)
Q Consensus 405 ~~~~~~V~-~~G~v~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~--------- 469 (536)
+ ..+|. +.|+.++ +.++|+.||++|+|| | |++++|||+||+|||+++.++ ..++++.
T Consensus 345 ~--~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg------~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 345 Y--PGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG------LADTVSDCSLENLADG 416 (485)
T ss_dssp S--TTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHH------HHHHCCBCCHHHHHTT
T ss_pred C--CCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCC------ccceeccCcccccccc
Confidence 3 36886 8999754 589999999999998 4 899999999999999998643 3335555
Q ss_pred -CceeecC--CHHHHHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 470 -GCGKFSK--SPKEIANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 470 -g~g~~~~--d~~~La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.|.+++ |+++|+++|.+++ + |++.+++|++++++ +.++++++++.+.+++++.
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWS-RPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHT-SHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 4677775 8999999999999 8 89999999999975 7899999999999988763
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=237.39 Aligned_cols=272 Identities=15% Similarity=0.116 Sum_probs=188.8
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC----------cccccccccCCEEEEcCH
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST----------CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~----------~~~~~~~~~~d~vi~~S~ 303 (536)
...+.+++++++||+||++++....++ ..+++..+ +|+++++++... ....++.+.+|.++++|+
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~----ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 155 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEG----IPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTP 155 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTT----CCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhC----CCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCH
Confidence 457788899999999999876443333 33445554 888766654321 112345677899999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHhhhcccC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l~~~~~~ 382 (536)
..++.+.+.|++++++.++||+..+.+.... .++++++++ + +.+++++++|.. ..++...+++++..... .
T Consensus 156 ~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~-~~~~~~~~~--~-~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~----~ 227 (376)
T 1v4v_A 156 LAKANLLKEGKREEGILVTGQTGVDAVLLAA-KLGRLPEGL--P-EGPYVTVTMHRRENWPLLSDLAQALKRVAE----A 227 (376)
T ss_dssp HHHHHHHTTTCCGGGEEECCCHHHHHHHHHH-HHCCCCTTC--C-SSCEEEECCCCGGGGGGHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHcCCCcceEEEECCchHHHHhhhh-hhhHHHHhc--C-CCCEEEEEeCcccchHHHHHHHHHHHHHHh----h
Confidence 9999998889988899999998643211000 000111122 2 345555555543 33455566666554332 2
Q ss_pred CCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccc
Q 036427 383 EPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 383 ~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+++++++++|.++.+.+.++++ ...++|+|+|++ .++.++|+.||++|++||+. ++|||++|+|+|+++..++.+
T Consensus 228 ~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S~g~-~lEA~a~G~PvI~~~~~~~~~ 306 (376)
T 1v4v_A 228 FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGL-QEEGAALGVPVVVLRNVTERP 306 (376)
T ss_dssp CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHH-HHHHHHTTCCEEECSSSCSCH
T ss_pred CCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECCcCH-HHHHHHcCCCEEeccCCCcch
Confidence 45677666668765444444432 224589999543 28999999999999999644 789999999999987544333
Q ss_pred cCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.+++.|.|.++ .|+++|+++|.++++ |++.+++|++++.++....+++++++.+.++++.
T Consensus 307 -----~~~~~g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 307 -----EGLKAGILKLAGTDPEGVYRVVKGLLE-NPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGL 367 (376)
T ss_dssp -----HHHHHTSEEECCSCHHHHHHHHHHHHT-CHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTS
T ss_pred -----hhhcCCceEECCCCHHHHHHHHHHHHh-ChHhhhhhcccCCCCCCChHHHHHHHHHHHHhcc
Confidence 26777888888 599999999999999 9999999998777777778999999999988763
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-26 Score=237.06 Aligned_cols=351 Identities=17% Similarity=0.148 Sum_probs=229.0
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCC
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTA 218 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~ 218 (536)
..+++||||+++++.. .+.. -...|.++|++. + ++++.++..... ..............|-+.+......
T Consensus 20 ~~~~~m~ki~~v~Gtr-~~~~-~~a~li~~l~~~-~-~~~~~~~~tG~h------~~~~~~~~~~~~i~~~~~l~~~~~~ 89 (396)
T 3dzc_A 20 FQSNAMKKVLIVFGTR-PEAI-KMAPLVQQLCQD-N-RFVAKVCVTGQH------REMLDQVLELFSITPDFDLNIMEPG 89 (396)
T ss_dssp ----CCEEEEEEECSH-HHHH-HHHHHHHHHHHC-T-TEEEEEEECCSS------SHHHHHHHHHTTCCCSEECCCCCTT
T ss_pred HHhCCCCeEEEEEecc-HhHH-HHHHHHHHHHhC-C-CCcEEEEEeccc------HHHHHHHHHhcCCCCceeeecCCCC
Confidence 3345678999998775 3433 346688999886 3 577754432111 0000000000111111111000000
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--Ccc---c----
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--TCH---P---- 288 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--~~~---~---- 288 (536)
... .........++.+++++++||+||+++.....++ ...++..+ ||++.+..... ..+ +
T Consensus 90 -----~~~-~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~----IPv~h~~ag~rs~~~~~~~~~~~~ 159 (396)
T 3dzc_A 90 -----QTL-NGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQ----IPVGHVEAGLRTGNIYSPWPEEGN 159 (396)
T ss_dssp -----CCH-HHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTT----CCEEEETCCCCCSCTTSSTTHHHH
T ss_pred -----CCH-HHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhC----CCEEEEECCccccccccCCcHHHH
Confidence 111 1122345568889999999999999987655444 33444444 99876654221 111 1
Q ss_pred cc-ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCc-------hHHHHHHcC-CCCCCCEEEEecCC
Q 036427 289 TW-FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRP-------KVELRRELG-MDEDLPAVLLMGGG 359 (536)
Q Consensus 289 ~~-~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~-------~~~~r~~lg-i~~~~~~il~~gg~ 359 (536)
++ +.+.+|.++++++..++.+.+.|++++++.++|||+.+........ +++++++++ ++++.++++++++.
T Consensus 160 r~~~~~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 160 RKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HHHHHHhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 12 3678899999999999999999999999999999875543221111 256778888 56667777777754
Q ss_pred CCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECC
Q 036427 360 EGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKA 434 (536)
Q Consensus 360 ~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s 434 (536)
.+. +.+..+++++.+... ..+++++++.+|.+++..+.+++. +..++|.+++++ .++..+|+.||++|++|
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~----~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S 315 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAE----QHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS 315 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHH----HCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred cccchhHHHHHHHHHHHHHH----hCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 332 334444554443322 246777777678776566666553 445689998877 48889999999999999
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
|+. .+|||++|+|+|+++..++. .++++.|.+.++. |+++|++++..+++ |++.+++|++++..+...++++
T Consensus 316 Gg~-~~EA~a~G~PvV~~~~~~~~-----~e~v~~G~~~lv~~d~~~l~~ai~~ll~-d~~~~~~m~~~~~~~~~~~aa~ 388 (396)
T 3dzc_A 316 GGI-QEEAPSLGKPVLVMRETTER-----PEAVAAGTVKLVGTNQQQICDALSLLLT-DPQAYQAMSQAHNPYGDGKACQ 388 (396)
T ss_dssp SGG-GTTGGGGTCCEEECCSSCSC-----HHHHHHTSEEECTTCHHHHHHHHHHHHH-CHHHHHHHHTSCCTTCCSCHHH
T ss_pred ccH-HHHHHHcCCCEEEccCCCcc-----hHHHHcCceEEcCCCHHHHHHHHHHHHc-CHHHHHHHhhccCCCcCChHHH
Confidence 844 48999999999998543322 2367788888876 79999999999999 9999999999998899999999
Q ss_pred HHHHHHH
Q 036427 514 RIVQDLH 520 (536)
Q Consensus 514 ~i~~~i~ 520 (536)
+|++.|.
T Consensus 389 ri~~~l~ 395 (396)
T 3dzc_A 389 RIADILA 395 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998775
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=230.60 Aligned_cols=351 Identities=12% Similarity=0.089 Sum_probs=230.1
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|++|||+++++.. .+... ...|.++|++. +.++++.++..... + .-..... ......+-+.+......
T Consensus 25 m~~~kI~~v~Gtr-~~~~~-~a~li~~l~~~-~~~~~~~~~~tG~h---~--~m~~~~~-~~~~i~~~~~l~v~~~~--- 92 (403)
T 3ot5_A 25 MAKIKVMSIFGTR-PEAIK-MAPLVLALEKE-PETFESTVVITAQH---R--EMLDQVL-EIFDIKPDIDLDIMKKG--- 92 (403)
T ss_dssp -CCEEEEEEECSH-HHHHH-HHHHHHHHHTC-TTTEEEEEEECC----------CHHHH-HHTTCCCSEECCCCC-C---
T ss_pred cccceEEEEEecC-hhHHH-HHHHHHHHHhC-CCCCcEEEEEecCc---H--HHHHHHH-HhcCCCCCcccccCCCC---
Confidence 4557999998775 34333 36688999886 32477654432111 0 0011111 01111110110000000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--Cc--------cccc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--TC--------HPTW 290 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--~~--------~~~~ 290 (536)
... .........++.+++++++||+||+++.....++ ...++..+ ||++.+..... +. .+.+
T Consensus 93 --~~~-~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~----IPv~h~~aglrs~~~~~~~p~~~~r~~ 165 (403)
T 3ot5_A 93 --QTL-AEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQ----KMLGHVEAGLRTWNKYSPFPEEMNRQL 165 (403)
T ss_dssp --CCH-HHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTT----CEEEEESCCCCCSCTTSSTTHHHHHHH
T ss_pred --CCH-HHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhC----CCEEEEECCccccccccCCcHHHHHHH
Confidence 111 1123345568889999999999999887544443 34455555 99876654221 11 2235
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-CC-CchHHHHHHcCCCCCCCEEEEecCCCC--CCcHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK-PV-RPKVELRRELGMDEDLPAVLLMGGGEG--MGPIE 366 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~~-~~~~~~r~~lgi~~~~~~il~~gg~~g--~k~~~ 366 (536)
+.+.+|.++++++..++.+.+.|++++++.++|||..+.... .. ..+.+.++++ ++.++++++++... .+...
T Consensus 166 ~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 166 TGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp HHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHTTHHH
T ss_pred HHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccCcHHH
Confidence 667789999999999999999999999999999986443211 11 1123445554 44567777666421 12344
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAM 443 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAm 443 (536)
.+++++.+... ..+++++++.+|.++..++.+++ .+..++|.++++++ ++..+|+.||++|++||+.+ +||+
T Consensus 243 ~ll~a~~~l~~----~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~-~EA~ 317 (403)
T 3ot5_A 243 GMFEAVREIVE----SREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQ-EEAP 317 (403)
T ss_dssp HHHHHHHHHHH----HCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECCHHHH-HHGG
T ss_pred HHHHHHHHHHH----hCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHH
Confidence 45555544332 24677777777877655555554 23446899999985 89999999999999997655 8999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
++|+|+|+++..++++ ++++.|.+.++. |+++|++++..+++ +++.+++|++++..+...+++++|++.|.+.
T Consensus 318 a~g~PvV~~~~~~~~~-----e~v~~g~~~lv~~d~~~l~~ai~~ll~-~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERP-----EGIEAGTLKLIGTNKENLIKEALDLLD-NKESHDKMAQAANPYGDGFAANRILAAIKSH 391 (403)
T ss_dssp GTTCCEEECCSSCSCH-----HHHHHTSEEECCSCHHHHHHHHHHHHH-CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHH
T ss_pred HhCCCEEEecCCCcch-----hheeCCcEEEcCCCHHHHHHHHHHHHc-CHHHHHHHHhhcCcccCCcHHHHHHHHHHHH
Confidence 9999999996544333 267888888886 99999999999999 9999999999888898999999999999998
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
+..
T Consensus 392 l~~ 394 (403)
T 3ot5_A 392 FEE 394 (403)
T ss_dssp HTC
T ss_pred hCC
Confidence 864
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=230.17 Aligned_cols=350 Identities=14% Similarity=0.082 Sum_probs=223.1
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchh--------HHHHHHh
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPR--------SYNFLVK 205 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~--------~y~~~~~ 205 (536)
.....+|||+|++.+. +||..++++|+++|.++ ||+|.++..... ..++.+..++. .+.....
T Consensus 15 ~~~~~~MrIl~~~~~~-~Gh~~~~~~la~~L~~~---GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 15 HIEGRHMRVLFASLGT-HGHTYPLLPLATAARAA---GHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp ---CCSCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred CcccceeEEEEEcCCC-cccHHHHHHHHHHHHHC---CCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhc
Confidence 3445678999999776 89999999999999999 788877653211 01111111111 0000000
Q ss_pred hccccceeecCCC-cccccch--hhhhh-hHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec
Q 036427 206 HGPLWKMTYYGTA-PRVIHQS--NFAAT-STFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 206 ~~~l~~~~~~~~~-~~~~~~~--~~~~~-~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~ 281 (536)
... ..... ....... .+... ......++.+++++++||+||+++.... ...+++..| +|++.+.+
T Consensus 91 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~--~~~aa~~~g----iP~v~~~~ 159 (412)
T 3otg_A 91 TDS-----PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG--AGLAALKAG----IPTICHGV 159 (412)
T ss_dssp CSC-----CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHHT----CCEEEECC
T ss_pred ccC-----CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH--HHHHHHHcC----CCEEEecc
Confidence 000 00000 0000000 00111 2223468888999999999999865443 234456666 89887766
Q ss_pred CCCCcc---c---ccc----------------cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHH
Q 036427 282 DLSTCH---P---TWF----------------HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVE 339 (536)
Q Consensus 282 d~~~~~---~---~~~----------------~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~ 339 (536)
+..... . .|+ ...+|.+++.++...+...... ... ++++...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~-- 231 (412)
T 3otg_A 160 GRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA-RPR-----RHELRPVPFAEQGDL-- 231 (412)
T ss_dssp SCCCCSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHT-CTT-----EEECCCCCCCCCCCC--
T ss_pred cccCchhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccC-CCC-----cceeeccCCCCCCCC--
Confidence 543110 0 011 1356677777766555443321 111 111211111111001
Q ss_pred HHHHc--CCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRREL--GMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~l--gi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+ ...++.+++++++|+.+ +...+.+..+.+.+. ..+.++++++|.+. ..+.++ .+.++|.+.|++
T Consensus 232 --~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~-----~~~~~~~~~~g~~~-~~~~l~--~~~~~v~~~~~~ 300 (412)
T 3otg_A 232 --PAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLA-----GLDADVLVASGPSL-DVSGLG--EVPANVRLESWV 300 (412)
T ss_dssp --CGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHH-----TSSSEEEEECCSSC-CCTTCC--CCCTTEEEESCC
T ss_pred --CCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHH-----cCCCEEEEEECCCC-Chhhhc--cCCCcEEEeCCC
Confidence 112 22456778888888776 445566667777665 23567777777654 112222 245789999999
Q ss_pred hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCH
Q 036427 418 SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~ 493 (536)
++.++|+.||++|+++|++|++|||++|+|+|+++..+++. .++..+.+.|.|..+. |+++|+++|.++++ |+
T Consensus 301 -~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~-~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~-~~ 377 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSF-ANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA-EE 377 (412)
T ss_dssp -CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHH-HHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH-CH
T ss_pred -CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCchhHH-HHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh-CH
Confidence 79999999999999999999999999999999999875544 4888899999999885 78999999999999 99
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+.+++|++.++++...++++++++.|++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998864
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=241.82 Aligned_cols=274 Identities=14% Similarity=0.113 Sum_probs=196.5
Q ss_pred HHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-----------------------ccc
Q 036427 236 REVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-----------------------PTW 290 (536)
Q Consensus 236 ~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-----------------------~~~ 290 (536)
..+..++++ .+||+||++......+++.+++..| +|++...|++.... ..+
T Consensus 395 ~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~g----vP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~ 470 (816)
T 3s28_A 395 DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLG----VTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIF 470 (816)
T ss_dssp HHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHT----CCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcC----CCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHH
Confidence 344455554 3799999986443334455566666 89987777543110 012
Q ss_pred ccccCCEEEEcCHHHHHHHHH----h------------------CCCCCCEEEeCCCCCCCCCCCCCchH----------
Q 036427 291 FHKLVTRCYCPTADVAKRAMK----A------------------GLQASQIKVYGLPVRPSFVKPVRPKV---------- 338 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~----~------------------g~~~~ki~vignpv~~~~~~~~~~~~---------- 338 (536)
..+.+|.+++.|+..++.+.+ + +....++.+++|++|.+.+.+.....
T Consensus 471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i 550 (816)
T 3s28_A 471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550 (816)
T ss_dssp HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence 567899999999998874211 1 11223899999999988776543211
Q ss_pred --------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH------------
Q 036427 339 --------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK------------ 396 (536)
Q Consensus 339 --------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------------ 396 (536)
..++.+|+ +++.++|+++|+....|++..+++++..... ..++++++++ |.++
T Consensus 551 ~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~----~~~~v~LvIv-G~g~~~~~~~~e~~~~ 625 (816)
T 3s28_A 551 EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTR----LRELANLVVV-GGDRRKESKDNEEKAE 625 (816)
T ss_dssp HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHH----HHHHCEEEEE-CCCTTSCCCCHHHHHH
T ss_pred cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHh----hCCCeEEEEE-eCCCcccccchhhHHH
Confidence 12344566 6778899999998888888888887765432 1245666554 5443
Q ss_pred --HHHHHHHcCCCCCCEEEecCh------hhHHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCCh
Q 036427 397 --KLANKLLSTDWKIPVQVKGFV------SKMEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNV 463 (536)
Q Consensus 397 --~l~~~l~~~~~~~~V~~~G~v------~~l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na 463 (536)
++.+.++++++.++|.|+|++ +++..+|+ ++|++|+|| | |++++|||+||+|||+++.++..+
T Consensus 626 ~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~E---- 701 (816)
T 3s28_A 626 MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE---- 701 (816)
T ss_dssp HHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHH----
T ss_pred HHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHH----
Confidence 345556677888899999964 36778887 679999998 4 899999999999999998654333
Q ss_pred hhHhh-CCceeecC--CHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 464 PYVVE-NGCGKFSK--SPKEIANMVSQWF----GPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 464 ~~lv~-~g~g~~~~--d~~~La~~I~~ll----~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++. ...|.+++ |+++++++|.+++ . |++.+++|+++|++.+ +.++|+.+++.+.++++.
T Consensus 702 --iV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~-d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 702 --IIVHGKSGFHIDPYHGDQAADTLADFFTKCKE-DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp --HCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred --HHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 554 44677775 8999999997766 8 9999999999999988 779999999999887764
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.6e-24 Score=222.44 Aligned_cols=345 Identities=12% Similarity=0.071 Sum_probs=212.7
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccccc-----CCCCCCcchhHHHHHHhhcccccee
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH-----TPWPFNQLPRSYNFLVKHGPLWKMT 213 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~-----~~~~~~~~~~~y~~~~~~~~l~~~~ 213 (536)
.++|.||||+|++.+. +||..+++.|+++|.++ ||+|.+++..... .++.+..++. .....
T Consensus 2 ~~~m~m~kIl~~~~~~-~Gh~~p~~~la~~L~~~---G~~V~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~ 67 (430)
T 2iyf_A 2 TTQTTPAHIAMFSIAA-HGHVNPSLEVIRELVAR---GHRVTYAIPPVFADKVAATGPRPVLYHS----------TLPGP 67 (430)
T ss_dssp ------CEEEEECCSC-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHTTSCEEEECCC----------CSCCT
T ss_pred CCccccceEEEEeCCC-CccccchHHHHHHHHHC---CCeEEEEeCHHHHHHHHhCCCEEEEcCC----------cCccc
Confidence 3445678999987655 89999999999999998 7888776532210 0110000000 00000
Q ss_pred ecCCC--cccccchhh--hhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c
Q 036427 214 YYGTA--PRVIHQSNF--AATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H 287 (536)
Q Consensus 214 ~~~~~--~~~~~~~~~--~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~ 287 (536)
..... ......... ..........+.+++++++||+||++.... ....+++..| +|.+.+.+..... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~--~~~~~A~~~g----iP~v~~~~~~~~~~~~ 141 (430)
T 2iyf_A 68 DADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSY--PARVLARRWG----VPAVSLSPNLVAWKGY 141 (430)
T ss_dssp TSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCH--HHHHHHHHHT----CCEEEEESSCCCCTTH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccH--HHHHHHHHcC----CCEEEEeccccccccc
Confidence 00000 000000000 001123345777888899999999876532 2344566666 8988776543200 0
Q ss_pred ---------------c----------ccccc------------cCCEEEEcCHHHHHHHHHhCCCCCC-EEEeCCCCCCC
Q 036427 288 ---------------P----------TWFHK------------LVTRCYCPTADVAKRAMKAGLQASQ-IKVYGLPVRPS 329 (536)
Q Consensus 288 ---------------~----------~~~~~------------~~d~vi~~S~~~~~~l~~~g~~~~k-i~vignpv~~~ 329 (536)
+ .++.+ ..+.+++.+....+... ..++ .+ +.++|+++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~-~~~v~~vG~~~~~~ 219 (430)
T 2iyf_A 142 EEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-DRVD-EDVYTFVGACQGDR 219 (430)
T ss_dssp HHHTHHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-GGSC-TTTEEECCCCC---
T ss_pred ccccccchhhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-ccCC-CccEEEeCCcCCCC
Confidence 0 00111 24556665544332211 1122 24 77777654321
Q ss_pred CCCCCCchHHHHHHcCC-CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCC
Q 036427 330 FVKPVRPKVELRRELGM-DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWK 408 (536)
Q Consensus 330 ~~~~~~~~~~~r~~lgi-~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~ 408 (536)
.... .+.. .++.++++++.|+.+ ....+.+..+++.+.+ .++.++++++|.+... +.++ .+.
T Consensus 220 ~~~~---------~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----~~~~~~~~~~G~~~~~-~~l~--~~~ 282 (430)
T 2iyf_A 220 AEEG---------GWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----LPGWHLVLQIGRKVTP-AELG--ELP 282 (430)
T ss_dssp --CC---------CCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----CTTEEEEEECC---CG-GGGC--SCC
T ss_pred CCCC---------CCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----CCCeEEEEEeCCCCCh-HHhc--cCC
Confidence 1000 0111 234566777777766 4445667777776641 1467777788876521 2222 245
Q ss_pred CCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHH
Q 036427 409 IPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANM 484 (536)
Q Consensus 409 ~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~ 484 (536)
++|.+.||+++. ++|+.||++|+++|++|++|||++|+|+|+++..+++ ..|++.+++.|.|..+. ++++|+++
T Consensus 283 ~~v~~~~~~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q-~~~a~~~~~~g~g~~~~~~~~~~~~l~~~ 360 (430)
T 2iyf_A 283 DNVEVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQ-FGNADMLQGLGVARKLATEEATADLLRET 360 (430)
T ss_dssp TTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHTTSEEECCCC-CCHHHHHHH
T ss_pred CCeEEEecCCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECCCccch-HHHHHHHHHcCCEEEcCCCCCCHHHHHHH
Confidence 789999999887 8999999999999999999999999999999976544 45888899999998885 78999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 485 VSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 485 I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|.++++ |++.+++|++.++++...++++++++.|++++++
T Consensus 361 i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 361 ALALVD-DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC
T ss_pred HHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhc
Confidence 999999 9999999999999888788999999999887765
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-24 Score=217.53 Aligned_cols=295 Identities=14% Similarity=0.092 Sum_probs=203.6
Q ss_pred CCCceEEEEeCC---------------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh
Q 036427 142 DQPKKVLILMSD---------------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH 206 (536)
Q Consensus 142 ~~~mKIL~~~~~---------------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~ 206 (536)
|++|||++++.. ..||..+.+..|+++|.+. |++|.++........ ....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~---G~~v~v~~~~~~~~~--~~~~---------- 65 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL---GHEVFLLGAPGSPAG--RPGL---------- 65 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT---TCEEEEESCTTSCCC--STTE----------
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc---CCeEEEEecCCCCCC--CCcc----------
Confidence 456999999876 3489999999999999998 888888765332111 0000
Q ss_pred ccccceeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc
Q 036427 207 GPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC 286 (536)
Q Consensus 207 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~ 286 (536)
..+. . . . ...+.+++++.+||+||++....... .++. .++| +...|+...
T Consensus 66 -~~~~----~-------~------~---~~~l~~~l~~~~~Dvi~~~~~~~~~~---~~~~----~~~p-v~~~h~~~~- 115 (342)
T 2iuy_A 66 -TVVP----A-------G------E---PEEIERWLRTADVDVVHDHSGGVIGP---AGLP----PGTA-FISSHHFTT- 115 (342)
T ss_dssp -EECS----C-------C------S---HHHHHHHHHHCCCSEEEECSSSSSCS---TTCC----TTCE-EEEEECSSS-
T ss_pred -eecc----C-------C------c---HHHHHHHHHhcCCCEEEECCchhhHH---HHhh----cCCC-EEEecCCCC-
Confidence 0000 0 0 0 01667788999999999988654321 1221 2478 777776542
Q ss_pred ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 287 HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 287 ~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
. ...+|.++++|+..++.+.+ ..++.+++|+++.+.+.+... .. ++.++++++|+....|+..
T Consensus 116 ~----~~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~~~~~--------~~-~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 116 R----PVNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYRSAAD--------QV-AKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp B----CSCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSCCSTT--------CC-CCCSCEEEESCCCGGGTHH
T ss_pred C----cccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcCcccc--------cC-CCCCEEEEEeccccccCHH
Confidence 1 22389999999999988754 577899999999876654321 11 3456788888877778877
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECCC------
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKAG------ 435 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG------ 435 (536)
.+++++... ++++ +++|.++ .+.+..++++ ++|+|.|+++ ++.++|+.||++|+||-
T Consensus 179 ~li~a~~~~---------~~~l-~i~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~ 246 (342)
T 2iuy_A 179 EAAAFAHAC---------GRRL-VLAGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPW 246 (342)
T ss_dssp HHHHHHHHH---------TCCE-EEESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTT
T ss_pred HHHHHHHhc---------CcEE-EEEeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCccccccc
Confidence 777766542 3554 4557654 3334444433 6999999996 66999999999998753
Q ss_pred --------hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---CceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 436 --------PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN---GCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 436 --------~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~---g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++++|||++|+|||+++.++.. ++++. ..|.+++ |+++++++|.++++ ++++
T Consensus 247 ~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~------e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~~ 311 (342)
T 2iuy_A 247 GGIWCEPGATVVSEAAVSGTPVVGTGNGCLA------EIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDEV 311 (342)
T ss_dssp CSCCCCCCCHHHHHHHHTTCCEEECCTTTHH------HHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHHH
T ss_pred ccccccCccHHHHHHHhcCCCEEEcCCCChH------HHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHHH
Confidence 79999999999999999964433 35544 4677777 99999999999875 4455
Q ss_pred HHhc-CCchHHHHHHHHHHHHhh
Q 036427 504 LKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++.+ +.++++++++.+.+++++
T Consensus 312 ~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 312 RRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp HHHHHHHHBHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHH
Confidence 5554 457788888877777654
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-22 Score=212.82 Aligned_cols=354 Identities=13% Similarity=0.057 Sum_probs=213.4
Q ss_pred CCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhHHHHHHhhccccc
Q 036427 137 NGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRSYNFLVKHGPLWK 211 (536)
Q Consensus 137 ~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~ 211 (536)
+..+...||||+|++.+. .||..++++|+++|.++ ||+|.+++.... ..++.+..++.... .. ....
T Consensus 13 ~~~~~~~m~rIl~~~~~~-~GHv~p~l~La~~L~~~---Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~---~~-~~~~ 84 (415)
T 3rsc_A 13 GHIEGRHMAHLLIVNVAS-HGLILPTLTVVTELVRR---GHRVSYVTAGGFAEPVRAAGATVVPYQSEII---DA-DAAE 84 (415)
T ss_dssp ------CCCEEEEECCSC-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCEEEECCCSTT---TC-CHHH
T ss_pred CCcCcccCCEEEEEeCCC-ccccccHHHHHHHHHHC---CCEEEEEeCHHHHHHHHhcCCEEEecccccc---cc-ccch
Confidence 455667789999999875 89999999999999999 888877653211 01111111100000 00 0000
Q ss_pred eeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccc
Q 036427 212 MTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWF 291 (536)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~ 291 (536)
... ...........+..........+.+++++++||+||++++.... ...++++.| +|++.+.+++.. +..|.
T Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~-~~~aA~~~g----iP~v~~~~~~~~-~~~~~ 157 (415)
T 3rsc_A 85 VFG-SDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIA-GQLLAARWR----RPAVRLSAAFAS-NEHYS 157 (415)
T ss_dssp HHH-SSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHH-HHHHHHHTT----CCEEEEESSCCC-CSSCC
T ss_pred hhc-cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhH-HHHHHHHhC----CCEEEEEecccc-cCccc
Confidence 000 00000000000111222344677888999999999987333222 234456665 899887765531 11110
Q ss_pred c---------ccCCEEE-EcCHHHHHHHHHhCCC-----------------------------CCCEEEeCCCCCCCCCC
Q 036427 292 H---------KLVTRCY-CPTADVAKRAMKAGLQ-----------------------------ASQIKVYGLPVRPSFVK 332 (536)
Q Consensus 292 ~---------~~~d~vi-~~S~~~~~~l~~~g~~-----------------------------~~ki~vignpv~~~~~~ 332 (536)
. ......+ .......+.+.++|++ +.++.++|+++.+..
T Consensus 158 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~-- 235 (415)
T 3rsc_A 158 FSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR-- 235 (415)
T ss_dssp HHHHHHHHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG--
T ss_pred cccccccccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc--
Confidence 0 0000000 0001111222223332 123444443332110
Q ss_pred CCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEE
Q 036427 333 PVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQ 412 (536)
Q Consensus 333 ~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~ 412 (536)
+........++.++|++++|+..... .+.+..+.+++. ..++++++++|.+... +.++ ....++.
T Consensus 236 ------~~~~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~-----~~~~~~v~~~g~~~~~-~~l~--~~~~~v~ 300 (415)
T 3rsc_A 236 ------FLGEWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFD-----GQPWHVVMTLGGQVDP-AALG--DLPPNVE 300 (415)
T ss_dssp ------GGCCCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHT-----TSSCEEEEECTTTSCG-GGGC--CCCTTEE
T ss_pred ------cCcCccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHh-----cCCcEEEEEeCCCCCh-HHhc--CCCCcEE
Confidence 00000111345678888878765433 355666666664 2337777778876321 2222 2457899
Q ss_pred EecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 413 VKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 413 ~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
+.+|+++. ++|..||++|+++|.+|++|||++|+|+|++|...++. .|+..+.+.|.|..+. ++++|+++|.++
T Consensus 301 ~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 378 (415)
T 3rsc_A 301 AHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQ-PMARRVDQLGLGAVLPGEKADGDTLLAAVGAV 378 (415)
T ss_dssp EESCCCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGH-HHHHHHHHHTCEEECCGGGCCHHHHHHHHHHH
T ss_pred EEecCCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHH-HHHHHHHHcCCEEEcccCCCCHHHHHHHHHHH
Confidence 99999876 99999999999999999999999999999998755544 5899999999998875 789999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ |++.+++|++.+.++...++++++++.|++++.+
T Consensus 379 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 379 AA-DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HT-CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 99 9999999999999999999999999999988754
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-22 Score=210.28 Aligned_cols=345 Identities=11% Similarity=0.082 Sum_probs=216.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhHHHHHHhhccccceeecC
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRSYNFLVKHGPLWKMTYYG 216 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 216 (536)
|.||||+|++.+. .||..+++.|+++|.++ ||+|.++..... ..+..+..++..+. . .......
T Consensus 2 m~M~~il~~~~~~-~Ghv~~~~~La~~L~~~---GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~----~---~~~~~~~ 70 (402)
T 3ia7_A 2 MRQRHILFANVQG-HGHVYPSLGLVSELARR---GHRITYVTTPLFADEVKAAGAEVVLYKSEFD----T---FHVPEVV 70 (402)
T ss_dssp CCCCEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECHHHHHHHHHTTCEEEECCCGGG----T---SSSSSSS
T ss_pred CCCCEEEEEeCCC-CcccccHHHHHHHHHhC---CCEEEEEcCHHHHHHHHHcCCEEEecccccc----c---ccccccc
Confidence 3456999998875 89999999999999999 788877653110 01111111110000 0 0000000
Q ss_pred CCcccccc-hh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccccccc--
Q 036427 217 TAPRVIHQ-SN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFH-- 292 (536)
Q Consensus 217 ~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~-- 292 (536)
........ .. +..........+.+++++++||+||++++.... ...++++.| +|++.+.+++.. +..|..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~-~~~aA~~~g----iP~v~~~~~~~~-~~~~~~~~ 144 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIA-GRLLAARWD----RPAVRLTGGFAA-NEHYSLFK 144 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHH-HHHHHHHHT----CCEEEEESSCCC-BTTBCHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHH-HHHHHHhhC----CCEEEEeccccc-Cccccccc
Confidence 00000000 00 111122334677888899999999997432222 234456666 899877765431 111100
Q ss_pred --------------------------------------ccC-CEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC
Q 036427 293 --------------------------------------KLV-TRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKP 333 (536)
Q Consensus 293 --------------------------------------~~~-d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~ 333 (536)
... +..++..+...+..... + +.++.++|+++.......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~vGp~~~~~~~~~ 222 (402)
T 3ia7_A 145 ELWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAET-F-DERFAFVGPTLTGRDGQP 222 (402)
T ss_dssp HHHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGG-C-CTTEEECCCCCCC----C
T ss_pred cccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcccc-C-CCCeEEeCCCCCCcccCC
Confidence 000 33333333222211110 1 234566665433211000
Q ss_pred CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEE
Q 036427 334 VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQV 413 (536)
Q Consensus 334 ~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~ 413 (536)
. .....++.++|+++.|+.+... .+.+..+.+++. ..+.++++++|.+... +.+. ....++.+
T Consensus 223 ~--------~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~-~~~~--~~~~~v~~ 285 (402)
T 3ia7_A 223 G--------WQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFA-----DTPWHVVMAIGGFLDP-AVLG--PLPPNVEA 285 (402)
T ss_dssp C--------CCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHT-----TSSCEEEEECCTTSCG-GGGC--SCCTTEEE
T ss_pred C--------CcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHh-----cCCcEEEEEeCCcCCh-hhhC--CCCCcEEE
Confidence 0 0111345678888888766544 355666666664 2346777888876321 2222 24578999
Q ss_pred ecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc-CCccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 414 KGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF-IAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 414 ~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~-~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
.+|+++. ++|..||++|+++|.+|++|||++|+|+|+++. ..+ +..|+..+.+.|.|..+. ++++|++++.++
T Consensus 286 ~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 286 HQWIPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATE-AAPSAERVIELGLGSVLRPDQLEPASIREAVERL 363 (402)
T ss_dssp ESCCCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGG-GHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHH
T ss_pred ecCCCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCccc-HHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHH
Confidence 9999887 999999999999999999999999999999987 554 446899999999998885 799999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ |++.+++|++.++++...++++++++.|++++++
T Consensus 364 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 364 AA-DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HH-CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 99 9999999999999999999999999999998865
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-24 Score=220.89 Aligned_cols=350 Identities=13% Similarity=0.110 Sum_probs=192.3
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchh--HHHHHHhhcccccee
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPR--SYNFLVKHGPLWKMT 213 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~--~y~~~~~~~~l~~~~ 213 (536)
++.+|||+|++.+. .||..++..|+++|+++ ||+|.++..... ..+..+..+.. .+........ ....
T Consensus 12 ~~~~MrIl~~~~~~-~gh~~~~~~La~~L~~~---GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (398)
T 4fzr_A 12 RGSHMRILVIAGCS-EGFVMPLVPLSWALRAA---GHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDR-EGNR 86 (398)
T ss_dssp ---CCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCT-TSCB
T ss_pred CCCceEEEEEcCCC-cchHHHHHHHHHHHHHC---CCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhc-cCcc
Confidence 35568999998875 89999999999999999 788877643111 11111111111 0000000000 0000
Q ss_pred ecCC-Cccc-c--cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccc
Q 036427 214 YYGT-APRV-I--HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPT 289 (536)
Q Consensus 214 ~~~~-~~~~-~--~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~ 289 (536)
+... .... . ....+..........+.+++++++||+||++..... ...+++..| +|++.+.+.+.. ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~--~~~~a~~~g----iP~v~~~~~~~~-~~~ 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLT--GPLVAATLG----IPWIEQSIRLAS-PEL 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTH--HHHHHHHHT----CCEEEECCSSCC-CHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccH--HHHHHHhhC----CCEEEeccCCCC-chh
Confidence 0000 0000 0 000111122234457888899999999998753332 234456666 898877765431 110
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCC---CCEEE--eCCCCCCC--------CCCCCC-chHHHHHHcCCCCCCCEEEE
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQA---SQIKV--YGLPVRPS--------FVKPVR-PKVELRRELGMDEDLPAVLL 355 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~---~ki~v--ignpv~~~--------~~~~~~-~~~~~r~~lgi~~~~~~il~ 355 (536)
+... ......+.+.+++++. ....+ ++..+... .+.+.. ....+...+...++.+.+++
T Consensus 160 ~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 232 (398)
T 4fzr_A 160 IKSA-------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNGRNDQVPSWVFEERKQPRLCL 232 (398)
T ss_dssp HHHH-------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCCCSSCCCCHHHHSCCSSCEEEC
T ss_pred hhHH-------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCCCCCCCchhhhcCCCCCEEEE
Confidence 0000 0001111111222220 01111 11100000 010100 00111111112245667777
Q ss_pred ecCCCCCCc-------HHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcC
Q 036427 356 MGGGEGMGP-------IEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 356 ~gg~~g~k~-------~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD 428 (536)
+.|+..... ..+.+..+.+++.+ .+.++++++|... .+.+.. ..++|.+.||+ ++.++|..||
T Consensus 233 ~~G~~~~~~~~~~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~--~~~l~~--~~~~v~~~~~~-~~~~ll~~ad 302 (398)
T 4fzr_A 233 TFGTRVPLPNTNTIPGGLSLLQALSQELPK-----LGFEVVVAVSDKL--AQTLQP--LPEGVLAAGQF-PLSAIMPACD 302 (398)
T ss_dssp C----------------CCSHHHHHHHGGG-----GTCEEEECCCC------------CCTTEEEESCC-CHHHHGGGCS
T ss_pred EccCcccccccccccchHHHHHHHHHHHHh-----CCCEEEEEeCCcc--hhhhcc--CCCcEEEeCcC-CHHHHHhhCC
Confidence 666553211 22334455555542 2466666655442 233332 45799999999 5899999999
Q ss_pred eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 036427 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNAL 504 (536)
Q Consensus 429 v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~ 504 (536)
++|+++|++|++|||++|+|+|++|..+++. +|+..+.+.|.|..++ ++++|+++|.++++ |++.+++|++.++
T Consensus 303 ~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~ 380 (398)
T 4fzr_A 303 VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVW-DSARLLHAAGAGVEVPWEQAGVESVLAACARIRD-DSSYVGNARRLAA 380 (398)
T ss_dssp EEEECCCHHHHHHHHHTTCCEEECCCSGGGH-HHHHHHHHTTSEEECC-------CHHHHHHHHHH-CTHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHhCCCEEecCCchhHH-HHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 9999999999999999999999998765544 5899999999999886 78899999999999 9999999999999
Q ss_pred HhcCCchHHHHHHHHHH
Q 036427 505 KLARPDAVFRIVQDLHE 521 (536)
Q Consensus 505 ~~a~~~~~~~i~~~i~~ 521 (536)
++....+++++++.+++
T Consensus 381 ~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 381 EMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHTTSCCHHHHHHHHTC
T ss_pred HHHcCCCHHHHHHHHhc
Confidence 99999999999988753
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-22 Score=204.31 Aligned_cols=353 Identities=10% Similarity=0.034 Sum_probs=204.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcc-hhHHHH---HHhhccccceee
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQL-PRSYNF---LVKHGPLWKMTY 214 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~-~~~y~~---~~~~~~l~~~~~ 214 (536)
.|||+|++.+. .||..++..|+++|+++ ||+|.++..... ..+..+..+ ...... .....+......
T Consensus 1 ~MrIl~~~~~~-~gh~~~~~~la~~L~~~---GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLPY-PTHLMAMVPLCWALQAS---GHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCSC-HHHHHTTHHHHHHHHHT---TCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCCC-cchhhhHHHHHHHHHHC---CCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccc
Confidence 38999999874 89999999999999999 788877642110 011111111 000000 000000000000
Q ss_pred cCCCcccccchhhhhhhHHH-------HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc
Q 036427 215 YGTAPRVIHQSNFAATSTFI-------AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH 287 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~ 287 (536)
.. .........+....... ...+.+++++++||+||++..... ...+++..| +|++.+.+++....
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~--~~~aa~~~g----iP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 77 GQ-RDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALI--GRVLGGLLD----LPVVLHRWGVDPTA 149 (391)
T ss_dssp GC-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHTT----CCEEEECCSCCCTT
T ss_pred cc-ccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhH--HHHHHHHhC----CCEEEEecCCcccc
Confidence 00 00000000111112223 567888999999999999853322 234556666 89888776653211
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCC---CEEEe--CCCCCCC--------CCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQAS---QIKVY--GLPVRPS--------FVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~---ki~vi--gnpv~~~--------~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
..+ .. .........+.+++++.. ...+. +..++.. .+.+..........+...++.+.++
T Consensus 150 ~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl 222 (391)
T 3tsa_A 150 GPF-SD------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNGSGAFPAWGAARTSARRVC 222 (391)
T ss_dssp THH-HH------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCCCCCEECCGGGSSCCSSEEEE
T ss_pred ccc-cc------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecCCCCcCCCchhhcCCCCCEEE
Confidence 100 00 001111222223333311 11111 1111000 0100000000111122234567787
Q ss_pred EecCCCCC-CcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEE
Q 036427 355 LMGGGEGM-GPI-EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIIT 432 (536)
Q Consensus 355 ~~gg~~g~-k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~ 432 (536)
++.|+... +.. ...+.++.+. . ..+++++++++|... .+.+. ....++.+.+|++ ..++|..||++|+
T Consensus 223 v~~G~~~~~~~~~~~~~~~~~~~-~----~~p~~~~v~~~~~~~--~~~l~--~~~~~v~~~~~~~-~~~ll~~ad~~v~ 292 (391)
T 3tsa_A 223 ICMGRMVLNATGPAPLLRAVAAA-T----ELPGVEAVIAVPPEH--RALLT--DLPDNARIAESVP-LNLFLRTCELVIC 292 (391)
T ss_dssp EECCHHHHHHHCSHHHHHHHHHH-H----TSTTEEEEEECCGGG--GGGCT--TCCTTEEECCSCC-GGGTGGGCSEEEE
T ss_pred EEcCCCCCcccchHHHHHHHHHh-c----cCCCeEEEEEECCcc--hhhcc--cCCCCEEEeccCC-HHHHHhhCCEEEe
Confidence 87776532 223 4556666655 4 245777766665432 12222 3457899999985 4678899999999
Q ss_pred CCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC------CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 433 KAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK------SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 433 ~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~------d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
++|++|++|||++|+|+|++|...++. .|+..+.+.|.|..+. ++++|++++.++++ |++.+++|++.++++
T Consensus 293 ~~G~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~ 370 (391)
T 3tsa_A 293 AGGSGTAFTATRLGIPQLVLPQYFDQF-DYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLG-DTGFAAAAIKLSDEI 370 (391)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSTTHH-HHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHT-CTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCEEecCCcccHH-HHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 999999999999999999998866554 5888899999999875 48999999999999 999999999999999
Q ss_pred cCCchHHHHHHHHHHHHhhc
Q 036427 507 ARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 507 a~~~~~~~i~~~i~~l~~~~ 526 (536)
....+++++++.|++++.++
T Consensus 371 ~~~~~~~~~~~~i~~~~~~~ 390 (391)
T 3tsa_A 371 TAMPHPAALVRTLENTAAIR 390 (391)
T ss_dssp HTSCCHHHHHHHHHHC----
T ss_pred HcCCCHHHHHHHHHHHHhcc
Confidence 99999999999999887653
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-21 Score=206.19 Aligned_cols=217 Identities=16% Similarity=0.123 Sum_probs=157.1
Q ss_pred ccCCEEEEcCHHHHHHHHHh-C--------CCCCCEEEeCCCCCCCCCCCCCc-------------------hHHHHHHc
Q 036427 293 KLVTRCYCPTADVAKRAMKA-G--------LQASQIKVYGLPVRPSFVKPVRP-------------------KVELRREL 344 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~-g--------~~~~ki~vignpv~~~~~~~~~~-------------------~~~~r~~l 344 (536)
..+|.++++|+..++.+... + ....++.+|+|++|.+.+.+..+ +..+++++
T Consensus 240 ~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~ 319 (536)
T 3vue_A 240 LEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEA 319 (536)
T ss_dssp HHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHT
T ss_pred HhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhc
Confidence 46899999999999987652 2 23568999999999887765321 23456677
Q ss_pred CCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHc--CCCCCCEEEecCh--
Q 036427 345 GMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLS--TDWKIPVQVKGFV-- 417 (536)
Q Consensus 345 gi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~--~~~~~~V~~~G~v-- 417 (536)
|++ ++.|+|+++|+....|++..+++++.+... .+.++ ++.|.++ +..+.++. .....++.+.+..
T Consensus 320 gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~------~~~~l-~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 320 GLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ------EDVQI-VLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp TSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT------SSCEE-EEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred CCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh------hCCeE-EEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 775 567899999999888998888888876542 45555 3445543 22222221 2345688888876
Q ss_pred hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-cee----------ecC--CHHH
Q 036427 418 SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGK----------FSK--SPKE 480 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~----------~~~--d~~~ 480 (536)
+++..+|+.||++|+|| | |++++|||+||+|||+++.++..| ++.+| .|+ +++ |+++
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e------~V~dg~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVD------TVIEGKTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHH------HCCBTTTEEECCCCCSCTTCCCHHHHHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchh------eeeCCCCccccccCCCceeEECCCCHHH
Confidence 47888999999999998 4 899999999999999999655433 45444 343 333 7899
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 481 IANMVSQWFG--PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 481 La~~I~~ll~--~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++|+++++ .++ .+++|.+++.+ +.++|+++++++++++++
T Consensus 467 la~ai~ral~~~~~~-~~~~~~~~am~--~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 467 VAATLKRAIKVVGTP-AYEEMVRNCMN--QDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHHTTSH-HHHHHHHHHHH--SCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCcH-HHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 9999987653 144 46677777643 679999999999999876
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=213.52 Aligned_cols=337 Identities=11% Similarity=0.003 Sum_probs=214.9
Q ss_pred CCCCCceEEEEeCCCC-chHHHHHHHHHHH--HHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecC
Q 036427 140 ENDQPKKVLILMSDTG-GGHRASAEAIKAA--FHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYG 216 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~G-gGh~~~~l~La~~--L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 216 (536)
...++|||++++..++ +|..+....|++. +.+. +++|++.+...... . .+....+... . +..
T Consensus 201 ~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~---~~~v~~~~~~~~~~----~----~~~~~~~~~~--~--~~~ 265 (568)
T 2vsy_A 201 RSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP---DLQMHLFATSGDDG----S----TLRTRLAQAS--T--LHD 265 (568)
T ss_dssp CSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT---TEEEEEEESSCCCS----C----HHHHHHHHTS--E--EEE
T ss_pred CCCCCeEEEEECcccccChHHHHHHHHHhhccCCcc---cEEEEEEECCCCCc----c----HHHHHHHhcC--e--EEE
Confidence 3467799999997753 5778888999999 6665 78998876532100 0 1111111111 1 110
Q ss_pred CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc--chHHHHHHHHcCCCCCceEEEEecCCCC-c-cccccc
Q 036427 217 TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM--QHVPLRILRAKGLLKKIVFTTVITDLST-C-HPTWFH 292 (536)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~--~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~-~~~~~~ 292 (536)
... .. ..++.+++++.+||+||.+.... ..+... +. . ..|++...+.+.. . .....+
T Consensus 266 ~~~----------~~---~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~ 326 (568)
T 2vsy_A 266 VTA----------LG---HLATAKHIRHHGIDLLFDLRGWGGGGRPEVF-AL--R---PAPVQVNWLAYPGTSGAPWMDY 326 (568)
T ss_dssp CTT----------CC---HHHHHHHHHHTTCSEEEECSSCTTCSSCHHH-HT--C---CSSEEEEESSSSSCCCCTTCCE
T ss_pred CCC----------CC---HHHHHHHHHhCCCCEEEECCCCCCcchHHHH-hc--C---CCceeEeeecCCcccCCCCceE
Confidence 000 01 24677889999999999865332 111222 21 1 1344333222211 1 111122
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
..+|.++++|+...+ + .+++.+++|.+.+....+.......|+++|++++. +++++|+... |+...+++++
T Consensus 327 ~~~d~~i~~s~~~~~----~---~~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~~-~v~~~g~~~~-K~~~~li~a~ 397 (568)
T 2vsy_A 327 VLGDAFALPPALEPF----Y---SEHVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQG-VVLCCFNNSY-KLNPQSMARM 397 (568)
T ss_dssp EEECTTTSCTTTGGG----C---SSEEEECSSCSCCCCTTCCCCCCCCTGGGTCCTTS-CEEEECCCGG-GCCHHHHHHH
T ss_pred EEECCCcCCcccccC----C---cceeEcCCCcCCCCCCCCCCCCCCCccccCCCCCC-EEEEeCCccc-cCCHHHHHHH
Confidence 345666777765433 2 27799999855443221111223356778887765 4557777766 8888888877
Q ss_pred HHHhhhcccCCCCcEEEEEec-CCH---HHHHHHHcCCCC-CCEEEecChh--hHHHHHhhcCeEEECC--C-hHHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICG-RNK---KLANKLLSTDWK-IPVQVKGFVS--KMEEAMGACDCIITKA--G-PGTIAEA 442 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G-~~~---~l~~~l~~~~~~-~~V~~~G~v~--~l~~ll~~aDv~V~~s--G-~~tllEA 442 (536)
.+... ..|+.++++ +| .++ ++.+.+++.++. ++|+|+|+++ ++.++|+.||++|.|| | |++++||
T Consensus 398 ~~l~~----~~~~~~l~i-~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEA 472 (568)
T 2vsy_A 398 LAVLR----EVPDSVLWL-LSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDA 472 (568)
T ss_dssp HHHHH----HCTTCEEEE-ECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHH
T ss_pred HHHHH----hCCCcEEEE-ecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHH
Confidence 76554 247777655 45 554 455667777887 8999999995 8999999999999998 4 8999999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc---CCchHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA---RPDAVFRIVQD 518 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~ 518 (536)
|+||+|||+.+.........+..+...|...++ +|+++++++|..+++ |++.+++|++++++.+ ..++++++++.
T Consensus 473 ma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 551 (568)
T 2vsy_A 473 LWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALAS-DPAALTALHARVDVLRRASGVFHMDGFADD 551 (568)
T ss_dssp HHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHH
T ss_pred HhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhcCCCCCHHHHHHH
Confidence 999999999443211111112223333444444 389999999999999 9999999999999987 67899999999
Q ss_pred HHHHHhh
Q 036427 519 LHELVRQ 525 (536)
Q Consensus 519 i~~l~~~ 525 (536)
+.+++++
T Consensus 552 ~~~~y~~ 558 (568)
T 2vsy_A 552 FGALLQA 558 (568)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=208.79 Aligned_cols=353 Identities=14% Similarity=0.097 Sum_probs=199.5
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccccc-----CCCCCCcchh--HHHHHHh----hc
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH-----TPWPFNQLPR--SYNFLVK----HG 207 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~-----~~~~~~~~~~--~y~~~~~----~~ 207 (536)
....++|||+|++.+. .||..+++.|+++|.++ ||+|.+++. ... .++.+..++. .+..... ..
T Consensus 15 ~~~~~~MrIl~~~~~~-~Ghv~~~~~La~~L~~~---GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPG-IGHLFPLIQLAWGFRTA---GHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp ----CCCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred chhhhcCEEEEEcCCC-cchHhHHHHHHHHHHHC---CCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCC
Confidence 3445668999999874 89999999999999999 888877754 210 1111111110 0000000 00
Q ss_pred cccceee--cCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC
Q 036427 208 PLWKMTY--YGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST 285 (536)
Q Consensus 208 ~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~ 285 (536)
+.+.... ............+..........+.+++++++||+||++..... ...+++..| +|++.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~--~~~aA~~~g----iP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATV--GLLAADRAG----VPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHHT----CCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhH--HHHHHHHcC----CCEEEEeccCCC
Confidence 0000000 00000000000111111223467888999999999998643332 234556666 898876655431
Q ss_pred ccc--ccccccCCEEEEcCHHHHHHHHHhCCC--CCCEEEeCCCC----------CCCCCCCCCchHHHHHHcCCCCCCC
Q 036427 286 CHP--TWFHKLVTRCYCPTADVAKRAMKAGLQ--ASQIKVYGLPV----------RPSFVKPVRPKVELRRELGMDEDLP 351 (536)
Q Consensus 286 ~~~--~~~~~~~d~vi~~S~~~~~~l~~~g~~--~~ki~vignpv----------~~~~~~~~~~~~~~r~~lgi~~~~~ 351 (536)
... ...... ....+.+++++ .....+...+- .+..+.+..........+...++.+
T Consensus 164 ~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T 3oti_A 164 TRGMHRSIASF----------LTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGAVLGDRLPPVPARP 233 (398)
T ss_dssp CTTHHHHHHTT----------CHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCCCCCCCEECCSSCCCCCSSC
T ss_pred ccchhhHHHHH----------HHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCccccCCCCCcCCchhhhcCCCCC
Confidence 100 000000 00111122221 01111111110 0000100000000111122234567
Q ss_pred EEEEecCCCCCC-cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeE
Q 036427 352 AVLLMGGGEGMG-PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCI 430 (536)
Q Consensus 352 ~il~~gg~~g~k-~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~ 430 (536)
.+++++|+.... ...+.+..+.+++. ..++++++++|... .+.+. ....+|.+.||+ ++.++|..||++
T Consensus 234 ~v~v~~G~~~~~~~~~~~~~~~~~~l~-----~~~~~~v~~~g~~~--~~~l~--~~~~~v~~~~~~-~~~~ll~~ad~~ 303 (398)
T 3oti_A 234 EVAITMGTIELQAFGIGAVEPIIAAAG-----EVDADFVLALGDLD--ISPLG--TLPRNVRAVGWT-PLHTLLRTCTAV 303 (398)
T ss_dssp EEEECCTTTHHHHHCGGGHHHHHHHHH-----TSSSEEEEECTTSC--CGGGC--SCCTTEEEESSC-CHHHHHTTCSEE
T ss_pred EEEEEcCCCccccCcHHHHHHHHHHHH-----cCCCEEEEEECCcC--hhhhc--cCCCcEEEEccC-CHHHHHhhCCEE
Confidence 788877766321 11223444444443 23577777776543 11222 346789999999 789999999999
Q ss_pred EECCChHHHHHHHHhCCcEEEeccCCccccCCh--hhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 431 ITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNV--PYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 431 V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na--~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
|+++|++|++|||++|+|+|++|...++. .|+ ..+.+.|.|..++..+...+.+.++++ |++.+++|++.++++..
T Consensus 304 v~~~G~~t~~Eal~~G~P~v~~p~~~dq~-~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~-~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 304 VHHGGGGTVMTAIDAGIPQLLAPDPRDQF-QHTAREAVSRRGIGLVSTSDKVDADLLRRLIG-DESLRTAAREVREEMVA 381 (398)
T ss_dssp EECCCHHHHHHHHHHTCCEEECCCTTCCS-SCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHhCCCEEEcCCCchhH-HHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998866554 588 999999999988622222333348888 99999999999999999
Q ss_pred CchHHHHHHHHHHHHh
Q 036427 509 PDAVFRIVQDLHELVR 524 (536)
Q Consensus 509 ~~~~~~i~~~i~~l~~ 524 (536)
..+++++++.|++++.
T Consensus 382 ~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 382 LPTPAETVRRIVERIS 397 (398)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999988764
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-20 Score=197.57 Aligned_cols=166 Identities=18% Similarity=0.188 Sum_probs=135.2
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
++.+++++++|+.+ ....+.+..+++++. ..+.++++++|.+.+. +.+. ...+++.+.+|+++. ++|..|
T Consensus 253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----~~~~~~~~~~g~~~~~-~~~~--~~~~~v~~~~~~~~~-~~l~~~ 322 (424)
T 2iya_A 253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVD-----GLDWHVVLSVGRFVDP-ADLG--EVPPNVEVHQWVPQL-DILTKA 322 (424)
T ss_dssp SSCCEEEEECCSSS-CCCHHHHHHHHHHHT-----TCSSEEEEECCTTSCG-GGGC--SCCTTEEEESSCCHH-HHHTTC
T ss_pred CCCCEEEEEcCCCC-cchHHHHHHHHHHHh-----cCCcEEEEEECCcCCh-HHhc--cCCCCeEEecCCCHH-HHHhhC
Confidence 34678888888776 334556666776664 3557777888875421 1122 245789999999887 899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|++|...+| ..|++.+.+.|.|..+. ++++|+++|+++++ |++.++++++.+
T Consensus 323 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ-~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~ 400 (424)
T 2iya_A 323 SAFITHAGMGSTMEALSNAVPMVAVPQIAEQ-TMNAERIVELGLGRHIPRDQVTAEKLREAVLAVAS-DPGVAERLAAVR 400 (424)
T ss_dssp SEEEECCCHHHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred CEEEECCchhHHHHHHHcCCCEEEecCccch-HHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999999999999999999987665 45899999999998886 89999999999999 999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhh
Q 036427 504 LKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.+.....+.+++++.|++++++
T Consensus 401 ~~~~~~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 401 QEIREAGGARAAADILEGILAE 422 (424)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhc
Confidence 9988889999999999988764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-20 Score=188.84 Aligned_cols=345 Identities=13% Similarity=0.069 Sum_probs=199.9
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhH-HHHHHhhcccccee-ecCC
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRS-YNFLVKHGPLWKMT-YYGT 217 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~-y~~~~~~~~l~~~~-~~~~ 217 (536)
|||+|++.+. +||..++++|+++|.++ ||+|.++..... ..++.+..++.. +........ .... ....
T Consensus 1 MrIl~~~~~~-~Gh~~p~~~la~~L~~~---Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGS-PATVFALAPLATAARNA---GHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDR-EGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCT-TSCBCCCCC
T ss_pred CEEEEEeCCc-cchHhHHHHHHHHHHHC---CCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhc-ccCccccCc
Confidence 7999987765 89999999999999998 788877643211 011111111110 000000000 0000 0000
Q ss_pred Cccccc---chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc------
Q 036427 218 APRVIH---QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP------ 288 (536)
Q Consensus 218 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~------ 288 (536)
...... ...+..........+.+++++++||+||++..... ...+++..| +|++.+.++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~--~~~~a~~~g----iP~v~~~~~~~~~~~~~~~~~ 149 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYV--APLLALHLG----VPHARQTWDAVDADGIHPGAD 149 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTH--HHHHHHHHT----CCEEEECCSSCCCTTTHHHHH
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhh--HHHHHHhcC----CCEEEeccCCcccchhhHHHH
Confidence 000000 00000011123457778889999999999865322 234566666 898866544321000
Q ss_pred ----cccccc-------CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEec
Q 036427 289 ----TWFHKL-------VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMG 357 (536)
Q Consensus 289 ----~~~~~~-------~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~g 357 (536)
.+..+. ++.+++.+....+... ..+..++..+ +. .......++. .-.++.+++++++
T Consensus 150 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~--~~-----~~~~~~~~~l---~~~~~~~~v~v~~ 217 (384)
T 2p6p_A 150 AELRPELSELGLERLPAPDLFIDICPPSLRPAN--AAPARMMRHV--AT-----SRQCPLEPWM---YTRDTRQRVLVTS 217 (384)
T ss_dssp HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT--SCCCEECCCC--CC-----CCCCBCCHHH---HCCCSSCEEEEEC
T ss_pred HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC--CCCCCceEec--CC-----CCCCCCCchh---hcCCCCCEEEEEC
Confidence 000000 2333333322111000 0000000000 00 0001111221 1123456777777
Q ss_pred CCCCCC---c-HHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEEC
Q 036427 358 GGEGMG---P-IEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITK 433 (536)
Q Consensus 358 g~~g~k---~-~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~ 433 (536)
|+.+.. + ..+.+..+++++. ..+.++++++|.. ..+.++. ..++|.+ ||++ ..++|..||++|++
T Consensus 218 Gs~~~~~~~~~~~~~~~~~~~al~-----~~~~~~~~~~g~~--~~~~l~~--~~~~v~~-~~~~-~~~~l~~~d~~v~~ 286 (384)
T 2p6p_A 218 GSRVAKESYDRNFDFLRGLAKDLV-----RWDVELIVAAPDT--VAEALRA--EVPQARV-GWTP-LDVVAPTCDLLVHH 286 (384)
T ss_dssp SSSSSCCSSCCCCTTHHHHHHHHH-----TTTCEEEEECCHH--HHHHHHH--HCTTSEE-ECCC-HHHHGGGCSEEEEC
T ss_pred CCCCccccccccHHHHHHHHHHHh-----cCCcEEEEEeCCC--CHHhhCC--CCCceEE-cCCC-HHHHHhhCCEEEeC
Confidence 765542 1 1122333334443 2346777766642 2233332 3468999 9985 68899999999999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+|++|++|||++|+|+|++|..++|. .|+..+.+.|.|..++ ++++|+++|.++++ |++.+++|++.+.++...
T Consensus 287 ~G~~t~~Ea~~~G~P~v~~p~~~dq~-~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 287 AGGVSTLTGLSAGVPQLLIPKGSVLE-APARRVADYGAAIALLPGEDSTEAIADSCQELQA-KDTYARRAQDLSREISGM 364 (384)
T ss_dssp SCTTHHHHHHHTTCCEEECCCSHHHH-HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHhCCCEEEccCcccch-HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999866554 5889899999998875 78999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHHhh
Q 036427 510 DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 510 ~~~~~i~~~i~~l~~~ 525 (536)
.+.+++++.|..++..
T Consensus 365 ~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 365 PLPATVVTALEQLAHH 380 (384)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhh
Confidence 9999999999988754
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-20 Score=193.46 Aligned_cols=312 Identities=11% Similarity=0.070 Sum_probs=196.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
.+|+|.+.+. |..+.+..|+++|.++ + +|.++...... +....+..+....+...+.
T Consensus 41 ~~iwih~~s~--G~~~~~~~L~~~L~~~---~-~v~v~~~~~~~-----------~~~~~~~~~~v~~~~~~p~------ 97 (374)
T 2xci_A 41 GALWVHTASI--GEFNTFLPILKELKRE---H-RILLTYFSPRA-----------REYLKTKSDFYDCLHPLPL------ 97 (374)
T ss_dssp TCEEEECSSH--HHHHHHHHHHHHHHHH---S-CEEEEESCGGG-----------HHHHHTTGGGCSEEEECCC------
T ss_pred CCEEEEcCCH--HHHHHHHHHHHHHHhc---C-CEEEEEcCCcH-----------HHHHHHhcccccceeECCC------
Confidence 4799998886 7788999999999998 5 67655432110 0000000000000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEEcCH
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~~S~ 303 (536)
. ....+.+++++++||+||+...... |..+. ... + |++.+...+.. ...+++.+.+|.++++|+
T Consensus 98 -----~---~~~~l~~~l~~~~pDiv~~~~~~~~--~~~~~-~~~---~-p~~~~~~~~~~~~~~~~~~~~~d~ii~~S~ 162 (374)
T 2xci_A 98 -----D---NPFSVKRFEELSKPKALIVVEREFW--PSLII-FTK---V-PKILVNAYAKGSLIEKILSKKFDLIIMRTQ 162 (374)
T ss_dssp -----S---SHHHHHHHHHHHCCSEEEEESCCCC--HHHHH-HCC---S-CEEEEEECCCCCHHHHHHHTTCSEEEESCH
T ss_pred -----C---CHHHHHHHHHHhCCCEEEEECccCc--HHHHH-HHh---C-CEEEEEeecCchHHHHHHHHhCCEEEECCH
Confidence 0 1236778899999999997543221 22222 222 2 65544444321 123466788999999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
..++.+.+.|++ ++.++||+..+.... +.. .+. .++++ .++. ..++...+++++....+ ..
T Consensus 163 ~~~~~l~~~g~~--ki~vi~n~~f~~~~~---~~~------~l~--~~vi~-~~~~-~~k~~~~ll~A~~~l~~----~~ 223 (374)
T 2xci_A 163 EDVEKFKTFGAK--RVFSCGNLKFICQKG---KGI------KLK--GEFIV-AGSI-HTGEVEIILKAFKEIKK----TY 223 (374)
T ss_dssp HHHHHHHTTTCC--SEEECCCGGGCCCCC---SCC------CCS--SCEEE-EEEE-CGGGHHHHHHHHHHHHT----TC
T ss_pred HHHHHHHHcCCC--eEEEcCCCccCCCcC---hhh------hhc--CCEEE-EEeC-CCchHHHHHHHHHHHHh----hC
Confidence 999999888876 899999873211110 010 011 24443 3333 34556666666654432 35
Q ss_pred CCcEEEEEecCCH----HHHHHHHcCCCC--------CCEEEecChhhHHHHHhhcCeEEECC-----ChHHHHHHHHhC
Q 036427 384 PIGQVLVICGRNK----KLANKLLSTDWK--------IPVQVKGFVSKMEEAMGACDCIITKA-----GPGTIAEAMIRG 446 (536)
Q Consensus 384 ~~~~~lvi~G~~~----~l~~~l~~~~~~--------~~V~~~G~v~~l~~ll~~aDv~V~~s-----G~~tllEAma~G 446 (536)
+++++++ +|.++ ++.+.+++.++. .+|.+.|+.+++..+|+.||+++++| |+.+++|||+||
T Consensus 224 p~~~lvi-vG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G 302 (374)
T 2xci_A 224 SSLKLIL-VPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWG 302 (374)
T ss_dssp TTCEEEE-EESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTT
T ss_pred CCcEEEE-ECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhC
Confidence 6777544 46664 345556666554 47899998899999999999988764 478999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCc--hHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPD--AVFRIVQ 517 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~--~~~~i~~ 517 (536)
+|||+++..++..+ ....+.+.|.+..+.|+++|+++|.++++ | +.+++|+++|++++.+. ..+++++
T Consensus 303 ~PVI~~~~~~~~~e-~~~~~~~~G~l~~~~d~~~La~ai~~ll~-d-~~r~~mg~~ar~~~~~~~ga~~~~~~ 372 (374)
T 2xci_A 303 IPVIYGPYTHKVND-LKEFLEKEGAGFEVKNETELVTKLTELLS-V-KKEIKVEEKSREIKGCYLEKLREFLR 372 (374)
T ss_dssp CCEEECSCCTTSHH-HHHHHHHTTCEEECCSHHHHHHHHHHHHH-S-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCccChHH-HHHHHHHCCCEEEeCCHHHHHHHHHHHHh-H-HHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 99998754332111 12223456766677899999999999999 9 99999999999987552 4444443
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-20 Score=195.06 Aligned_cols=163 Identities=20% Similarity=0.144 Sum_probs=126.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.+++++++++|+.+ ...+.+..+.+++.+ .+.++++++|.+... .....+++.+.+|+++ .++|..|
T Consensus 236 ~~~~~v~v~~Gs~~--~~~~~~~~~~~al~~-----~~~~~v~~~g~~~~~-----~~~~~~~v~~~~~~~~-~~~l~~~ 302 (415)
T 1iir_A 236 AGPPPVYLGFGSLG--APADAVRVAIDAIRA-----HGRRVILSRGWADLV-----LPDDGADCFAIGEVNH-QVLFGRV 302 (415)
T ss_dssp TSSCCEEEECC-----CCHHHHHHHHHHHHH-----TTCCEEECTTCTTCC-----CSSCGGGEEECSSCCH-HHHGGGS
T ss_pred hCCCeEEEeCCCCC--CcHHHHHHHHHHHHH-----CCCeEEEEeCCCccc-----ccCCCCCEEEeCcCCh-HHHHhhC
Confidence 34467777777764 223444455555542 235677777865411 1234468999999976 5789999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|++|..++|. .|+..+.+.|.|..+. ++++|.++|.++ + |++.++++++.+
T Consensus 303 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~ 379 (415)
T 1iir_A 303 AAVIHHGGAGTTHVAARAGAPQILLPQMADQP-YYAGRVAELGVGVAHDGPIPTFDSLSAALATA-L-TPETHARATAVA 379 (415)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSTTHH-HHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-T-SHHHHHHHHHHH
T ss_pred CEEEeCCChhHHHHHHHcCCCEEECCCCCccH-HHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-c-CHHHHHHHHHHH
Confidence 99999999999999999999999999877665 5899999999998875 789999999999 8 999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhhc
Q 036427 504 LKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+++...++.+++++.|+++++++
T Consensus 380 ~~~~~~~~~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 380 GTIRTDGAAVAARLLLDAVSREK 402 (415)
T ss_dssp HHSCSCHHHHHHHHHHHHHHTC-
T ss_pred HHHhhcChHHHHHHHHHHHHhcc
Confidence 99988999999999999988754
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=202.96 Aligned_cols=273 Identities=12% Similarity=0.048 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--------ccccccccCCEEEEcCHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--------HPTWFHKLVTRCYCPTAD 304 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--------~~~~~~~~~d~vi~~S~~ 304 (536)
....++.+++++++||+|++++......+...+++.+ ||++.+....... .+.++.+.+|.++++++.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~----IPv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te~ 156 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRK----IPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEH 156 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTT----CCEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSHH
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhC----CCEEEEeCCCccccccCcHHHHHHHHHhhhceeecCCHH
Confidence 3556888999999999999988654443445566665 9987665543211 123446788999999999
Q ss_pred HHHHHHHhCCCCCCEEEeCCCCCCCCCCC--CCchHHHHHHcCCCCCCCEEEEecCCCCC----CcHHHHHHHHHHHhhh
Q 036427 305 VAKRAMKAGLQASQIKVYGLPVRPSFVKP--VRPKVELRRELGMDEDLPAVLLMGGGEGM----GPIEATARALGNALYD 378 (536)
Q Consensus 305 ~~~~l~~~g~~~~ki~vignpv~~~~~~~--~~~~~~~r~~lgi~~~~~~il~~gg~~g~----k~~~~~l~al~~~l~~ 378 (536)
.++.+.+.|++++++.++|||+.+..... ...++++++++|+++ .+++++++++... +.+..+++++.+...
T Consensus 157 ~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~- 234 (385)
T 4hwg_A 157 ARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIK- 234 (385)
T ss_dssp HHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999875533211 112345778899976 4677777765432 223344444433221
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcC-C-C--CCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLST-D-W--KIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~-~-~--~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
.. ++.+++..+ +...+.+++. + . .++|.+++..+ ++..+|+.||++|+.||+ ...||+++|+|+|++
T Consensus 235 ---~~-~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 235 ---EY-NFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp ---HH-CCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECCTT-HHHHHHHTTCCEEEC
T ss_pred ---cC-CeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECCcc-HHHHHHHcCCCEEEc
Confidence 11 455554443 5566666665 3 2 35899977653 789999999999999986 469999999999998
Q ss_pred ccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHh
Q 036427 453 DFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 453 ~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~~ 524 (536)
+.....+ +.++.|.+.++. |+++|.+++..+++ |++.++.|++++..+ ...+++++|++.|.+.+.
T Consensus 308 ~~~ter~-----e~v~~G~~~lv~~d~~~i~~ai~~ll~-d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 308 REAHERP-----EGMDAGTLIMSGFKAERVLQAVKTITE-EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp SSSCSCT-----HHHHHTCCEECCSSHHHHHHHHHHHHT-TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCccch-----hhhhcCceEEcCCCHHHHHHHHHHHHh-ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 7543222 257778888885 99999999999999 888888888888888 899999999999988764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=194.66 Aligned_cols=351 Identities=12% Similarity=0.054 Sum_probs=199.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc----cCCCCCCcc----hhHHHHHHhhcccccee
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD----HTPWPFNQL----PRSYNFLVKHGPLWKMT 213 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~----~~~~~~~~~----~~~y~~~~~~~~l~~~~ 213 (536)
-+.|||||++.+. .||..++++||++|.++ ||+|.+++.... ..+..+..+ .................
T Consensus 20 ~~~MRIL~~~~p~-~GHv~P~l~LA~~L~~r---Gh~Vt~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (400)
T 4amg_A 20 FQSMRALFITSPG-LSHILPTVPLAQALRAL---GHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPM 95 (400)
T ss_dssp -CCCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEECSSTHHHHTTTCEEEESSTTCCSHHHHSCCC-------
T ss_pred CCCCeEEEECCCc-hhHHHHHHHHHHHHHHC---CCEEEEEeCcchhhHHhcCCeeEecCCchhHhhhcccccccccccc
Confidence 3558999998776 79999999999999999 888877643211 001100000 00000000000000000
Q ss_pred ecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-----
Q 036427 214 YYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP----- 288 (536)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~----- 288 (536)
.............+..........+.+.+++++||+||++...... ..+++..| +|.+.+........+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~--~~~A~~~g----ip~~~~~~~~~~~~~~~~~~ 169 (400)
T 4amg_A 96 HSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAG--PLTAAALQ----LPCVELPLGPADSEPGLGAL 169 (400)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHH--HHHHHHTT----CCEEECCSSTTTCCHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHH--HHHHHHcC----CCceeecccccccccchhhH
Confidence 0000000000011111222334566778899999999988655432 34566666 887765443321111
Q ss_pred --ccc-----------cccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 289 --TWF-----------HKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 289 --~~~-----------~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
+++ ....+..+............... .+.....-+.+.... ......+...++.++|+
T Consensus 170 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~v~ 241 (400)
T 4amg_A 170 IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYNGG--------AVLPDWLPPAAGRRRIA 241 (400)
T ss_dssp HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCCCC--------EECCTTCSCCTTCCEEE
T ss_pred HHHHHHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCccccccccc--------ccCcccccccCCCcEEE
Confidence 000 01111222233222221110000 001110000000000 00001223345667888
Q ss_pred EecCCCCC-CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEEC
Q 036427 355 LMGGGEGM-GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITK 433 (536)
Q Consensus 355 ~~gg~~g~-k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~ 433 (536)
+++|+... ....+.+..+.+.+. ..+.++++..+.... + ......+++.+.+|++ ..++|..||++|++
T Consensus 242 vs~Gs~~~~~~~~~~~~~~~~~l~-----~~~~~~v~~~~~~~~--~--~~~~~~~~v~~~~~~p-~~~lL~~~~~~v~h 311 (400)
T 4amg_A 242 VTLGSIDALSGGIAKLAPLFSEVA-----DVDAEFVLTLGGGDL--A--LLGELPANVRVVEWIP-LGALLETCDAIIHH 311 (400)
T ss_dssp ECCCSCC--CCSSSTTHHHHHHGG-----GSSSEEEEECCTTCC--C--CCCCCCTTEEEECCCC-HHHHHTTCSEEEEC
T ss_pred EeCCcccccCccHHHHHHHHHHhh-----ccCceEEEEecCccc--c--ccccCCCCEEEEeecC-HHHHhhhhhheecc
Confidence 87776543 222233444555554 345666666554421 0 1123567899999995 57899999999999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
+|.+|++||+++|+|+|+.|..++|.. |+..+++.|.|..+++.+.++++|+++|+ |+++|+++++.++++....+..
T Consensus 312 ~G~~s~~Eal~~GvP~v~~P~~~dQ~~-na~~v~~~G~g~~l~~~~~~~~al~~lL~-d~~~r~~a~~l~~~~~~~~~~~ 389 (400)
T 4amg_A 312 GGSGTLLTALAAGVPQCVIPHGSYQDT-NRDVLTGLGIGFDAEAGSLGAEQCRRLLD-DAGLREAALRVRQEMSEMPPPA 389 (400)
T ss_dssp CCHHHHHHHHHHTCCEEECCC---CHH-HHHHHHHHTSEEECCTTTCSHHHHHHHHH-CHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCccHHHHHHHhCCCEEEecCcccHHH-HHHHHHHCCCEEEcCCCCchHHHHHHHHc-CHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999999999999998877664 89999999999999877778889999999 9999999999999888888899
Q ss_pred HHHHHHHHH
Q 036427 514 RIVQDLHEL 522 (536)
Q Consensus 514 ~i~~~i~~l 522 (536)
++++.|+++
T Consensus 390 ~~a~~le~l 398 (400)
T 4amg_A 390 ETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988875
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-20 Score=195.86 Aligned_cols=169 Identities=16% Similarity=0.172 Sum_probs=126.3
Q ss_pred CCCCCEEEEecCCCCCC--cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHH
Q 036427 347 DEDLPAVLLMGGGEGMG--PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAM 424 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k--~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll 424 (536)
.++.++|++++|+.+.. ...+.+..+++++. ..+.++++++|... . +.++ ...++|.+.+|+++ .++|
T Consensus 264 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~-----~~~~~~v~~~g~~~-~-~~l~--~~~~~v~~~~~~~~-~~ll 333 (441)
T 2yjn_A 264 EPERRRVCLTLGISSRENSIGQVSIEELLGAVG-----DVDAEIIATFDAQQ-L-EGVA--NIPDNVRTVGFVPM-HALL 333 (441)
T ss_dssp CCSSCEEEEEC----------CCSTTTTHHHHH-----TSSSEEEECCCTTT-T-SSCS--SCCSSEEECCSCCH-HHHG
T ss_pred CCCCCEEEEECCCCcccccChHHHHHHHHHHHH-----cCCCEEEEEECCcc-h-hhhc--cCCCCEEEecCCCH-HHHH
Confidence 34567788888876542 11222333333333 23467777666432 1 1111 34568999999986 7899
Q ss_pred hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 425 GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
..||++|+++|++|++|||++|+|+|++|..++|. .|++.+.+.|.|..+. ++++|+++|.++++ |++.+++|+
T Consensus 334 ~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~ 411 (441)
T 2yjn_A 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTG-VRAQRTQEFGAGIALPVPELTPDQLRESVKRVLD-DPAHRAGAA 411 (441)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHH-HHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHH-CHHHHHHHH
T ss_pred hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHH-HHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 99999999999999999999999999999865554 5899999999998875 78999999999999 999999999
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 501 QNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 501 ~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
+.++++...++.+++++.|+++++++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~i~~~~~~~~ 438 (441)
T 2yjn_A 412 RMRDDMLAEPSPAEVVGICEELAAGRR 438 (441)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999887643
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-21 Score=202.13 Aligned_cols=327 Identities=11% Similarity=0.058 Sum_probs=189.0
Q ss_pred CCCceEEEEeCCCC----chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 142 DQPKKVLILMSDTG----GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 142 ~~~mKIL~~~~~~G----gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.++|||++++.... .|..+.+..|+++|.++ ||+|.|++.... + ... . .... +.+...+...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~---GheV~Vvt~~~~--~----~~~-~---~~~~-~~~~~~~~~~ 109 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK---KFKKRIILTDAT--P----NPK-D---LQSF-KSFKYVMPEE 109 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT---TCEEEEEESSCC--C----CHH-H---HGGG-TTSEECCTTC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc---CCceEEEEecCC--C----ChH-H---HHhh-hccceeeccC
Confidence 46689999986532 14446789999999998 888887765321 0 000 0 0111 0010000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHH----HcCCCCCceEEEEecCCCCcc-c----
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILR----AKGLLKKIVFTTVITDLSTCH-P---- 288 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~----~~g~~~~ip~v~~~~d~~~~~-~---- 288 (536)
........ ..+.. .+...++..+||+||+++...........+ ..+.. +.+.+.+++++.... +
T Consensus 110 ~~~~~~~i-~~~~~-----~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 182 (413)
T 2x0d_A 110 DKDFALQI-VPFND-----RYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIP-PNKILYIIQDFEPGFYQWSSQ 182 (413)
T ss_dssp CCCCSEEE-EECSC-----CTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCC-CCCEEEEECSCGGGGSCSSHH
T ss_pred Ccccccee-eeccc-----cccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccc-cCcEEEEEeechhhcCccChH
Confidence 00000000 00000 000111224699999886432111111111 11211 256666666654211 1
Q ss_pred ----ccccccCC--EEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC-
Q 036427 289 ----TWFHKLVT--RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG- 361 (536)
Q Consensus 289 ----~~~~~~~d--~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g- 361 (536)
.+.++.++ .++++|+..++.+.+.|++..++.+++++++.+.+.+. .. ..++.+.++++|+...
T Consensus 183 ~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~--------~~-~~~~~~~il~~gr~~~~ 253 (413)
T 2x0d_A 183 YVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYI--------ND-KRQKEKIILVYGRPSVK 253 (413)
T ss_dssp HHHHHHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTT--------TS-CCCCCSEEEEEECTTCG
T ss_pred HHHHHHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhccc--------cc-ccCCCCEEEEEecCchh
Confidence 12334444 58899999999999888876778899998876533211 01 1234567888888643
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCC---cEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--
Q 036427 362 MGPIEATARALGNALYDENLGEPI---GQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-- 434 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~---~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-- 434 (536)
.|....+++++..... ..++ +++ +++|.+++. .+++...+|+|+|++ +++.++|+.||++|+||
T Consensus 254 ~Kg~~~li~A~~~l~~----~~~~~~~~~l-~ivG~~~~~----~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~ 324 (413)
T 2x0d_A 254 RNAFTLIVEALKIFVQ----KYDRSNEWKI-ISVGEKHKD----IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS 324 (413)
T ss_dssp GGCHHHHHHHHHHHHH----HCTTGGGCEE-EEEESCCCC----EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSS
T ss_pred ccCHHHHHHHHHHHHH----hCCCCCceEE-EEEcCCchh----hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCC
Confidence 4566666776664432 1343 554 556766421 234455689999997 59999999999999997
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+ |++++||||||+|||+.. .+..+ ++++ ..|.+++ |+++|+++|.++++ |++.+++ ++++.+..
T Consensus 325 E~~g~~~lEAmA~G~PVV~~~-~g~~e------~v~~~~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~---~~~~~~~~ 393 (413)
T 2x0d_A 325 PHPSYPPLEMAHFGLRVITNK-YENKD------LSNWHSNIVSLEQLNPENIAETLVELCM-SFNNRDV---DKKESSNM 393 (413)
T ss_dssp SSCCSHHHHHHHTTCEEEEEC-BTTBC------GGGTBTTEEEESSCSHHHHHHHHHHHHH-HTC----------CCBSC
T ss_pred CCCCcHHHHHHhCCCcEEEeC-CCcch------hhhcCCCEEEeCCCCHHHHHHHHHHHHc-CHHHHHH---hHHHHHHh
Confidence 4 899999999999999954 33233 4544 4576664 99999999999999 8887776 56777778
Q ss_pred chHHHHHHH
Q 036427 510 DAVFRIVQD 518 (536)
Q Consensus 510 ~~~~~i~~~ 518 (536)
++|+++++.
T Consensus 394 ~~W~~~~~~ 402 (413)
T 2x0d_A 394 MFYINEFNE 402 (413)
T ss_dssp GGGCCCC--
T ss_pred CCHHHHHHH
Confidence 888877544
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-19 Score=187.23 Aligned_cols=164 Identities=15% Similarity=0.065 Sum_probs=129.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.++++|++++|+.+.....+.+..+.+++.+ .+.++++++|.+.. + . ....+++.+.+|++ ..++|..|
T Consensus 235 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~-----~~~~~v~~~g~~~~--~-~--~~~~~~v~~~~~~~-~~~ll~~~ 303 (416)
T 1rrv_A 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRA-----QGRRVILSRGWTEL--V-L--PDDRDDCFAIDEVN-FQALFRRV 303 (416)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHH-----TTCCEEEECTTTTC--C-C--SCCCTTEEEESSCC-HHHHGGGS
T ss_pred cCCCeEEEecCCCCccChHHHHHHHHHHHHH-----CCCeEEEEeCCccc--c-c--cCCCCCEEEeccCC-hHHHhccC
Confidence 3446677777876543345566666666642 24567777787641 1 1 23456899999996 57899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|+.|...+|. .|+..+.+.|.|..+. ++++|.++|+++ + |++.+++|++.+
T Consensus 304 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~ 380 (416)
T 1rrv_A 304 AAVIHHGSAGTEHVATRAGVPQLVIPRNTDQP-YFAGRVAALGIGVAHDGPTPTFESLSAALTTV-L-APETRARAEAVA 380 (416)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSBTHH-HHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-T-SHHHHHHHHHHT
T ss_pred CEEEecCChhHHHHHHHcCCCEEEccCCCCcH-HHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-h-CHHHHHHHHHHH
Confidence 99999999999999999999999999876665 5899999999998774 789999999999 8 999999999999
Q ss_pred HHhcCCchHHHHHHHH-HHHHhhc
Q 036427 504 LKLARPDAVFRIVQDL-HELVRQR 526 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i-~~l~~~~ 526 (536)
+++....+. ++++.| ++++++.
T Consensus 381 ~~~~~~~~~-~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 381 GMVLTDGAA-AAADLVLAAVGREK 403 (416)
T ss_dssp TTCCCCHHH-HHHHHHHHHHHC--
T ss_pred HHHhhcCcH-HHHHHHHHHHhccC
Confidence 988888899 999999 8877653
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-20 Score=193.38 Aligned_cols=232 Identities=12% Similarity=0.031 Sum_probs=158.8
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CC-CC--cc------cccccccCCEEEEcCHHHH
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DL-ST--CH------PTWFHKLVTRCYCPTADVA 306 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~-~~--~~------~~~~~~~~d~vi~~S~~~~ 306 (536)
+.++++ ++|+||........+ ..+++..+ +|++...+ |. .. .. .++..+.+|.++++|+..+
T Consensus 118 l~~~~~--~~DvIh~~~~~~~~~-~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 118 LLDWMR--ESDVIVFESGIAVAF-IELAKRVN----PAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HHHHHH--HCSEEEEESSGGGGG-HHHHHHHC----TTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGG
T ss_pred HHHHhc--CCCEEEECCchHHHH-HHHHHHhC----CCEEEEEeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHH
Confidence 334444 699999443332211 13445554 66654433 33 10 00 1345678999999999998
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIG 386 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~ 386 (536)
+.+.+.+ ++.+++|+++.+.+.+.... . .++.++++++|+....|+. +..+.+. .+++
T Consensus 191 ~~~~~~~----~i~vipngvd~~~f~~~~~~-------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-------~~~~ 248 (406)
T 2hy7_A 191 AEVVSRD----NVFHVGHGVDHNLDQLGDPS-------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-------FPQV 248 (406)
T ss_dssp GGCSCST----TEEECCCCBCTTHHHHHCSC-------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-------CTTE
T ss_pred HHHHhcC----CEEEEcCCcChHhcCccccc-------c-cCCCcEEEEEeccccccCH---HHHHHHh-------CCCe
Confidence 8765544 79999999987654321110 0 1223677888877665555 3444332 3667
Q ss_pred EEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHH-------HhCCcEEEec
Q 036427 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAM-------IRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAm-------a~GlPVI~~~ 453 (536)
++ +++|.++ .++.++.++|+|+|++ +++.++|+.||++|+|| | |++++||| +||+|||+++
T Consensus 249 ~l-~ivG~g~-----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~ 322 (406)
T 2hy7_A 249 TF-HVIGSGM-----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPN 322 (406)
T ss_dssp EE-EEESCSS-----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEG
T ss_pred EE-EEEeCch-----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEeh
Confidence 65 4557775 4555677899999998 48999999999999998 3 88999999 9999999998
Q ss_pred cCCccccCChhhHhhCCceee-cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH--Hhh
Q 036427 454 FIAGQEAGNVPYVVENGCGKF-SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL--VRQ 525 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~-~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l--~~~ 525 (536)
. +.+...|.+ ++ |+++|+++|.++++ +++ +..++.++|+++++.+.++ .++
T Consensus 323 ~-----------v~~~~~G~l~v~~~d~~~la~ai~~ll~-~~~---------~~~~~~~sw~~~a~~~~~~~~y~~ 378 (406)
T 2hy7_A 323 A-----------VVGPYKSRFGYTPGNADSVIAAITQALE-APR---------VRYRQCLNWSDTTDRVLDPRAYPE 378 (406)
T ss_dssp G-----------GTCSCSSEEEECTTCHHHHHHHHHHHHH-CCC---------CCCSCCCBHHHHHHHHHCGGGSGG
T ss_pred h-----------cccCcceEEEeCCCCHHHHHHHHHHHHh-Ccc---------hhhhhcCCHHHHHHHHHHhhcccc
Confidence 4 333445666 53 99999999999999 776 1456789999999999998 554
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=149.35 Aligned_cols=172 Identities=21% Similarity=0.203 Sum_probs=129.6
Q ss_pred eCCCCCCCCCC--CCCc-----hHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHh--hhcccCCCCcEEEEE
Q 036427 322 YGLPVRPSFVK--PVRP-----KVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNAL--YDENLGEPIGQVLVI 391 (536)
Q Consensus 322 ignpv~~~~~~--~~~~-----~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l--~~~~~~~~~~~~lvi 391 (536)
++|++|.+.+. +... +..++++++++++ ++++++|+.. ..|+...+++++.... . ..++++++++
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~----~~~~~~l~i~ 76 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK----EFQEMRFIII 76 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSG----GGGGEEEEEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhc----cCCCeEEEEE
Confidence 57899988887 6543 6678999999755 4788888877 7788887777776543 2 2356765554
Q ss_pred ecCCH-----HHHHHHHcCCCCCCEEE-ecChh--hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccc
Q 036427 392 CGRNK-----KLANKLLSTDWKIPVQV-KGFVS--KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 392 ~G~~~-----~l~~~l~~~~~~~~V~~-~G~v~--~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e 459 (536)
|.++ ++.+.+++.+ +|++ .|+++ ++.++|+.||++|+|+ | |++++|||++|+|||+++.++..
T Consensus 77 -G~~~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~- 151 (200)
T 2bfw_A 77 -GKGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR- 151 (200)
T ss_dssp -CCBCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHH-
T ss_pred -CCCChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChH-
Confidence 5543 3344445544 8999 99996 9999999999999998 3 89999999999999999854322
Q ss_pred cCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 460 AGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
.+++.+.|.+++ |+++++++|.++++++++.+++|++++++++.
T Consensus 152 -----e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 152 -----DIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -----HHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -----HHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 244555677775 99999999999997679999999999998654
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-17 Score=159.23 Aligned_cols=265 Identities=11% Similarity=0.080 Sum_probs=159.4
Q ss_pred ceEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|||+|.+. .+|.||.+||++||++|+ . ..+++.... +.. +. +.+ +.... ...
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~-~-----v~F~~~~~~---~~~---~~-------~~g--~~v~~-l~~--- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS-D-----VSFACLPLE---GSL---ID-------EIP--YPVYE-LSS--- 55 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS-S-----EEEEECCCT---TCC---GG-------GCC--SCEEE-CSS---
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH-h-----CEEEEecCc---HhH---HH-------HCC--CeEEE-cCc---
Confidence 79999974 488999999999999997 2 123332211 100 00 000 00000 000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHH-cCCCCCceEEEEecCCCCcccccccccCCEEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRA-KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYC 300 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~-~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~ 300 (536)
....++.+++++.+||+||.++.....--...++. .+ .+ +.++.|+.. ...+|.++.
T Consensus 56 -----------~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~----~~-i~~iDD~~~------~~~~Dllin 113 (282)
T 3hbm_A 56 -----------ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETG----VK-ILSFDDEIK------PHHCDILLN 113 (282)
T ss_dssp -----------SCHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHC----CE-EEEECSSCC------CCCCSEEEE
T ss_pred -----------cCHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcC----cE-EEEEecCCC------cccCCEEEe
Confidence 01135667788899999999987665332233333 23 33 346677641 235899998
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
.+.......-+..+|+.....+|+ |++++|+.... ...+..+.|++++|+.+..+.. ..+.+++.
T Consensus 114 ~~~~~~~~~Y~~~~p~~~~~l~G~~Y~~lR~eF~~~~~---------~~r~~~~~ILv~~GG~d~~~l~---~~vl~~L~ 181 (282)
T 3hbm_A 114 VNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAK---------ENRKKKYDFFICMGGTDIKNLS---LQIASELP 181 (282)
T ss_dssp CSTTCCGGGGTTTCC-CCEEEESGGGCCCCHHHHHHTT---------CCCCCCEEEEEECCSCCTTCHH---HHHHHHSC
T ss_pred CCcccchhhccccCCCCCeEeeCCcccccCHHHHHhhh---------hccccCCeEEEEECCCchhhHH---HHHHHHhh
Confidence 765432111111244444557777 67666543210 0112345666655544444432 33444443
Q ss_pred hcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 378 DENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
+ . .++.+++|.+....+.+++. ....++++.+++++|.++|+.||++|+++| +|+.|++++|+|+|++|...
T Consensus 182 ~----~--~~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~ 254 (282)
T 3hbm_A 182 K----T--KIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYVK 254 (282)
T ss_dssp T----T--SCEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCSG
T ss_pred c----C--CCEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCCC
Confidence 1 1 24667788775333333221 112489999999999999999999999755 89999999999999999866
Q ss_pred ccccCChhhHhhCCceeecC
Q 036427 457 GQEAGNVPYVVENGCGKFSK 476 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~ 476 (536)
+|+ .|++.+.+.|.+.++.
T Consensus 255 ~Q~-~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 255 NQE-STATWLAKKGYEVEYK 273 (282)
T ss_dssp GGH-HHHHHHHHTTCEEECG
T ss_pred CHH-HHHHHHHHCCCEEEcc
Confidence 555 5999999999988765
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-15 Score=163.02 Aligned_cols=267 Identities=11% Similarity=0.040 Sum_probs=175.4
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-----cc----c--cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP-----TW----F--HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~-----~~----~--~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
.+|+|+++.+....++..+ ++.. .++|++.+.|-...... .| + ...+|.+...+....+.+...
T Consensus 123 ~~DiV~vHdyhl~~l~~~l-r~~~--~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~ 199 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHEL-RKRG--VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLS 199 (482)
T ss_dssp TTCEEEEESGGGTTHHHHH-HHTT--CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHH-HHhC--CCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHH
Confidence 4699999986554444433 3332 24787766553211110 01 1 123577777777666655421
Q ss_pred ---C------------CCCCCEEEeCCCCCCCCCCCC----Cc--hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 313 ---G------------LQASQIKVYGLPVRPSFVKPV----RP--KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 313 ---g------------~~~~ki~vignpv~~~~~~~~----~~--~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
+ -...++.++++++|.+.+.+. .. .+++|++++ ++++|+++|+....|++..++++
T Consensus 200 ~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A 276 (482)
T 1uqt_A 200 NLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFLA 276 (482)
T ss_dssp HHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHH
T ss_pred HHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHH
Confidence 1 123468899999997655321 11 346777776 56788899998888999888888
Q ss_pred HHHHhhhcccCCCCcEEEEEec----CCH---HHHHHHHcC--------CC--CCCEEE-ecCh--hhHHHHHhhcCeEE
Q 036427 372 LGNALYDENLGEPIGQVLVICG----RNK---KLANKLLST--------DW--KIPVQV-KGFV--SKMEEAMGACDCII 431 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G----~~~---~l~~~l~~~--------~~--~~~V~~-~G~v--~~l~~ll~~aDv~V 431 (536)
+...+.+......++.++++++ +++ ++.+.++++ +. -.+|++ .|++ +++..+|+.||++|
T Consensus 277 ~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v 356 (482)
T 1uqt_A 277 YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGL 356 (482)
T ss_dssp HHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEE
Confidence 8766542100011244444432 232 233333321 11 124665 5665 58999999999999
Q ss_pred ECC---C-hHHHHHHHHhCC-----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 432 TKA---G-PGTIAEAMIRGL-----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 432 ~~s---G-~~tllEAma~Gl-----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
+|| | +++++|||+||+ |+|+++..+..+. + + .|.+++ |+++++++|.++++++++.+++++
T Consensus 357 ~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~-----l-~--~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~ 428 (482)
T 1uqt_A 357 VTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE-----L-T--SALIVNPYDRDEVAAALDRALTMSLAERISRH 428 (482)
T ss_dssp ECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT-----C-T--TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred ECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH-----h-C--CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 998 5 899999999997 8999886543332 3 2 456665 999999999999985578899999
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 501 QNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 501 ~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+++++.+..++++++++.+++.+++.
T Consensus 429 ~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 429 AEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 99999888899999999999888763
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.1e-15 Score=155.70 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=111.6
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+...+++++|++++|+.+... .+.+..+++.+.+ .+.++++++|... .+.+.+.+ ....++.+.+|+
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~~l~~-----~~~~~lw~~~~~~~~~l~~~~~~-~~~~~~~v~~w~ 333 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTVTTPP-PAEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGFLE-KTRGYGMVVPWA 333 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSSCCCC-HHHHHHHHHHHHH-----HTCCEEEECCGGGGGGSCTTHHH-HHTTTEEEESCC
T ss_pred HHHHHhcCCCcceEEEecCccccCC-HHHHHHHHHHHHh-----cCCeEEEEECCcchhhCCHHHHh-hcCCceEEecCC
Confidence 4455544556789999999877544 3445556555542 3456788887643 11111110 013589999999
Q ss_pred hhHHHHHh--hcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC----CHHHHHHHHHHHhC
Q 036427 418 SKMEEAMG--ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK----SPKEIANMVSQWFG 490 (536)
Q Consensus 418 ~~l~~ll~--~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~----d~~~La~~I~~ll~ 490 (536)
++. ++|. .+|++|+++|.+|++||+++|+|+|+.|...+|.. |+..+++. |.|..+. +.+++.++|+++++
T Consensus 334 pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~-Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~ 411 (456)
T 2c1x_A 334 PQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL-NGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILS 411 (456)
T ss_dssp CHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHH
T ss_pred CHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH-HHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHC
Confidence 875 6777 78999999999999999999999999999887765 99999999 9999874 78999999999998
Q ss_pred CCHHHHHHHHHHHH
Q 036427 491 PKIDELKAMSQNAL 504 (536)
Q Consensus 491 ~d~~~~~~m~~~a~ 504 (536)
+++ .++|+++++
T Consensus 412 -~~~-~~~~r~~a~ 423 (456)
T 2c1x_A 412 -QEK-GKKLRENLR 423 (456)
T ss_dssp -SHH-HHHHHHHHH
T ss_pred -CCc-HHHHHHHHH
Confidence 874 334444433
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.2e-15 Score=149.31 Aligned_cols=227 Identities=14% Similarity=0.117 Sum_probs=153.4
Q ss_pred HHHHh-hCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCHHHH
Q 036427 240 KGLMK-YQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTADVA 306 (536)
Q Consensus 240 ~~l~~-~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~~~~ 306 (536)
.++.. .++|+||...|..... ...+.++.... ++|++..+||+.... .+|+++.+|.++++|+.++
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~-~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~ 145 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLY-DIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMI 145 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTS-SCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhc-CCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHH
Confidence 34444 3589999988765322 22233443222 489999999986411 1467899999999999999
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIG 386 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~ 386 (536)
+.+.++|++..++.++++.-... . . + ...+.+.+.++++|+ .+.. +.+.+. .+++
T Consensus 146 ~~l~~~G~~~~ki~~~~~~~~~~--~-~-~-------~~~~~~~~~i~yaG~-l~k~----------~~L~~l---~~~~ 200 (339)
T 3rhz_A 146 DKLRDFGMNVSKTVVQGMWDHPT--Q-A-P-------MFPAGLKREIHFPGN-PERF----------SFVKEW---KYDI 200 (339)
T ss_dssp HHHHHTTCCCSEEEECCSCCCCC--C-C-C-------CCCCEEEEEEEECSC-TTTC----------GGGGGC---CCSS
T ss_pred HHHHHcCCCcCceeecCCCCccC--c-c-c-------ccccCCCcEEEEeCC-cchh----------hHHHhC---CCCC
Confidence 99999999877887665431111 0 0 0 011223455655555 4421 111111 2567
Q ss_pred EEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CC----------hHHHHHHHHhCCcEEEec
Q 036427 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AG----------PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG----------~~tllEAma~GlPVI~~~ 453 (536)
++ +++|.+++. ... ||+|.|++ +++..+|+.+|+.++. ++ |.++.||||+|+|||+.+
T Consensus 201 ~f-~ivG~G~~~-------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~ 271 (339)
T 3rhz_A 201 PL-KVYTWQNVE-------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE 271 (339)
T ss_dssp CE-EEEESCCCC-------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred eE-EEEeCCccc-------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence 65 556777632 234 99999998 4899999888876653 32 789999999999999987
Q ss_pred cCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 454 FIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
... .++.+.+.++|+.+++.+++.++|..+ +++.+++|++++++.+..
T Consensus 272 ~~~-----~~~~v~~~~~G~~~~~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~ 319 (339)
T 3rhz_A 272 GIA-----NQELIENNGLGWIVKDVEEAIMKVKNV---NEDEYIELVKNVRSFNPI 319 (339)
T ss_dssp TCT-----TTHHHHHHTCEEEESSHHHHHHHHHHC---CHHHHHHHHHHHHHHTHH
T ss_pred Chh-----HHHHHHhCCeEEEeCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH
Confidence 433 445577889999999999999999875 467799999999887544
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=137.51 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=109.7
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHh
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMG 425 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~ 425 (536)
++++++|+....|+...+++++.. +. ..+++++ +++|.++ ++.+.+++.+. ++.+ |++ +++.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~-l~----~~~~~~l-~i~G~g~~~~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVAL-SK----YKQDIVL-LLKGKGPDEKKIKLLAQKLGV--KAEF-GFVNSNELLEILK 73 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHT-CT----TGGGEEE-EEECCSTTHHHHHHHHHHHTC--EEEC-CCCCHHHHHHHHT
T ss_pred eEEEEEeccchhcCHHHHHHHHHH-hc----cCCCeEE-EEEeCCccHHHHHHHHHHcCC--eEEE-eecCHHHHHHHHH
Confidence 567788887777888777777754 32 2356665 5557664 44555555554 7888 997 58999999
Q ss_pred hcCeEEECC---C-hHHHHHHHHhCC-cEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHH
Q 036427 426 ACDCIITKA---G-PGTIAEAMIRGL-PIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 426 ~aDv~V~~s---G-~~tllEAma~Gl-PVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m 499 (536)
.||++|+|| | |++++|||++|+ |||+++..+... .++.++...+. .|+++++++|.++++ +++.+++|
T Consensus 74 ~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~ 147 (166)
T 3qhp_A 74 TCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR-----QFALDERSLFEPNNAKDLSAKIDWWLE-NKLERERM 147 (166)
T ss_dssp TCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG-----GGCSSGGGEECTTCHHHHHHHHHHHHH-CHHHHHHH
T ss_pred hCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh-----hhccCCceEEcCCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 999999998 4 899999999998 999955333222 24444433333 499999999999999 99999999
Q ss_pred HHHHHHhcCCchHHHHHH
Q 036427 500 SQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 500 ~~~a~~~a~~~~~~~i~~ 517 (536)
+++++++++.++++++++
T Consensus 148 ~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 148 QNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHHHHHHC------
T ss_pred HHHHHHHHHHCChhhhhc
Confidence 999999887788887765
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-14 Score=150.02 Aligned_cols=355 Identities=14% Similarity=0.055 Sum_probs=200.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccce--eecCCCcc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKM--TYYGTAPR 220 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~--~~~~~~~~ 220 (536)
++++|+++.... .||..+.+.||+.|.+++| |++|+++......... +...-.......+.+.. +.....+.
T Consensus 8 ~~~~vv~~p~p~-~GHi~P~l~La~~L~~r~p-G~~Vt~v~t~~~~~~~----~~~~~~~~~~~~~~i~~~~lp~~~~~~ 81 (463)
T 2acv_A 8 KNSELIFIPAPG-IGHLASALEFAKLLTNHDK-NLYITVFCIKFPGMPF----ADSYIKSVLASQPQIQLIDLPEVEPPP 81 (463)
T ss_dssp HCEEEEEECCSS-TTTHHHHHHHHHHHHHTCT-TEEEEEEECCCTTCCC----CHHHHHHHHCSCTTEEEEECCCCCCCC
T ss_pred CCCEEEEEcCcc-cchHHHHHHHHHHHHhcCC-CcEEEEEEcCCcchhh----hhhhhhhcccCCCCceEEECCCCCCCc
Confidence 347899998877 7999999999999998743 6888766432211000 00000000000000000 00000000
Q ss_pred c---c-cchhhhhhhHHHHHHHHHHHHh---hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCC----------
Q 036427 221 V---I-HQSNFAATSTFIAREVAKGLMK---YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDL---------- 283 (536)
Q Consensus 221 ~---~-~~~~~~~~~~~~~~~l~~~l~~---~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~---------- 283 (536)
. . ....+..........+.+++++ .+||+||++...... ..++++.| ||.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~--~~vA~~lg----iP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 82 QELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSM--IDVGNEFG----IPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp GGGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGG--HHHHHHTT----CCEEEEESSCHHHHHHHHHG
T ss_pred ccccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhH--HHHHHHcC----CCEEEEeCchHHHHHHHHHH
Confidence 0 0 0000111112233467777877 689999988743322 34567776 7866543210
Q ss_pred ------------C-----Cccccc------------c----------------cccCCEEEEcCHHHHH-HHH----HhC
Q 036427 284 ------------S-----TCHPTW------------F----------------HKLVTRCYCPTADVAK-RAM----KAG 313 (536)
Q Consensus 284 ------------~-----~~~~~~------------~----------------~~~~d~vi~~S~~~~~-~l~----~~g 313 (536)
. ...+.+ + .+.++.+++.+-...+ ... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 156 KNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp GGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred HhhcccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 0 000000 0 1345566654433333 221 111
Q ss_pred CCCCCEEEeCCCCCCCCCCC--C---CchHHHHHHcCCCCCCCEEEEecCCCC-CCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 314 LQASQIKVYGLPVRPSFVKP--V---RPKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~--~---~~~~~~r~~lgi~~~~~~il~~gg~~g-~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.|..++..+|. +....... . ....+..+.+.-.+++++|++++|+.+ ... .+.+..+++.+.+ .+.+
T Consensus 236 ~p~~~v~~vGp-l~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~~~l~~-----~~~~ 308 (463)
T 2acv_A 236 EKIPPIYAVGP-LLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG-PSQIREIALGLKH-----SGVR 308 (463)
T ss_dssp TTSCCEEECCC-CCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCC-HHHHHHHHHHHHH-----HTCE
T ss_pred ccCCcEEEeCC-CcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCC-HHHHHHHHHHHHh-----CCCc
Confidence 11346888984 43221101 1 112345555655556789999999887 433 2345555555542 3467
Q ss_pred EEEEecCC-H----HHHHHHHcCCCCCCEEEecChhhHHHHHh--hcCeEEECCChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 388 VLVICGRN-K----KLANKLLSTDWKIPVQVKGFVSKMEEAMG--ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 388 ~lvi~G~~-~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~--~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
+++++|.+ . ...+.... ..++.+.+|++++ ++|. .+|++|+++|.+|++||+++|+|+|+.|...+|..
T Consensus 309 ~l~~~~~~~~~l~~~~~~~~~~---~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 384 (463)
T 2acv_A 309 FLWSNSAEKKVFPEGFLEWMEL---EGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL 384 (463)
T ss_dssp EEEECCCCGGGSCTTHHHHHHH---HCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred EEEEECCCcccCChhHHHhhcc---CCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHH
Confidence 88888864 1 22222200 2478899999876 5665 78999999999999999999999999999887764
Q ss_pred CChhhH-hhCCceeec-C---------CHHHHHHHHHHHhCCCHHHHHHHHHHHH---HhcCC-chHHHHHHHHHH
Q 036427 461 GNVPYV-VENGCGKFS-K---------SPKEIANMVSQWFGPKIDELKAMSQNAL---KLARP-DAVFRIVQDLHE 521 (536)
Q Consensus 461 ~na~~l-v~~g~g~~~-~---------d~~~La~~I~~ll~~d~~~~~~m~~~a~---~~a~~-~~~~~i~~~i~~ 521 (536)
|+..+ .+.|.|..+ . +.+++.++|+++++.++++++++.+.+. +...+ .++.+-.+.+.+
T Consensus 385 -Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 459 (463)
T 2acv_A 385 -NAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459 (463)
T ss_dssp -HHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred -HHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 99985 688999877 1 6799999999999723566655554443 33334 334444444443
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-14 Score=151.73 Aligned_cols=102 Identities=12% Similarity=0.114 Sum_probs=78.7
Q ss_pred hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-------CceeecC-----CH----
Q 036427 419 KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-------GCGKFSK-----SP---- 478 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-------g~g~~~~-----d~---- 478 (536)
++.++|+.||++|+|| | |.+++|||+||+|||+++.++..+. +.+. +.|+++. ++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~-----V~dg~~~~~~~~tG~lV~~rd~~d~ee~a 585 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSY-----MEDLIETNQAKDYGIYIVDRRFKAPDESV 585 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHH-----HHTTSCHHHHHHTTEEEECCSSSCHHHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhh-----hhccccccCCCCceEEEeCCCCCCHHHHH
Confidence 5899999999999999 3 8999999999999999997654331 2221 2455551 44
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 479 KEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 479 ~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++|+++|..+++.+++.++.|++++++.++.+.|+++++.+.++.++
T Consensus 586 eaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~ 632 (725)
T 3nb0_A 586 EQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQL 632 (725)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45555565555547888999999999999999999999998876654
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=9.7e-14 Score=147.03 Aligned_cols=262 Identities=12% Similarity=0.050 Sum_probs=180.0
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----cccc-c------ccccCCEEEEcCHHHHHHHHHh
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHPT-W------FHKLVTRCYCPTADVAKRAMKA 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~~-~------~~~~~d~vi~~S~~~~~~l~~~ 312 (536)
.-|+|.+|.+-+..+|..+ ++.+. +.+...+.| .+.. ..+. | ..-.+|.+...++...+.+...
T Consensus 149 ~~D~VwVhDYhL~llp~~l-R~~~~--~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~ 225 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALL-REQRP--DAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES 225 (496)
T ss_dssp SSCEEEEESGGGTTHHHHH-HHHCT--TSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHH-HhhCC--CCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence 3579999887776666554 43332 355555544 3321 2221 1 1246899999999888776542
Q ss_pred ------CCCC-------------CCEEEeCCCCCCCCCCCCCc--hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 313 ------GLQA-------------SQIKVYGLPVRPSFVKPVRP--KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 313 ------g~~~-------------~ki~vignpv~~~~~~~~~~--~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
|.+. .++.++++++|+..+.+... +.+++++++ ++++|+.+|+....|++...+++
T Consensus 226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~A 302 (496)
T 3t5t_A 226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRA 302 (496)
T ss_dssp HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHH
T ss_pred HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---CceEEEEcccCccccCHHHHHHH
Confidence 3221 25778999999887754321 356777886 57889999998888999999999
Q ss_pred HHHHhhhcccCCCC---cEEEEEe----cCCH---HHHHHHHcC----C---CCCCEEEecCh--hhHHHHHhhcCeEEE
Q 036427 372 LGNALYDENLGEPI---GQVLVIC----GRNK---KLANKLLST----D---WKIPVQVKGFV--SKMEEAMGACDCIIT 432 (536)
Q Consensus 372 l~~~l~~~~~~~~~---~~~lvi~----G~~~---~l~~~l~~~----~---~~~~V~~~G~v--~~l~~ll~~aDv~V~ 432 (536)
+ +.+.+ .|+ +.++.++ |.++ +++++++++ + -..+|+++|.+ +++..+|+.||++|+
T Consensus 303 f-~ll~~----~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv 377 (496)
T 3t5t_A 303 F-VLAAR----GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIF 377 (496)
T ss_dssp H-HHHHH----TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEE
T ss_pred H-HHHHh----CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEE
Confidence 8 66652 344 3344443 2333 233333332 1 01179999986 589999999999999
Q ss_pred CC---C-hHHHHHHHHhC---CcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 433 KA---G-PGTIAEAMIRG---LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 433 ~s---G-~~tllEAma~G---lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
+| | +++++|||+|| .|+|++...+. +..+.+ .|.+++ |+++++++|.++|+++++.++.+.++.
T Consensus 378 ~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa-----~~~l~~--~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~ 450 (496)
T 3t5t_A 378 NSTVDGQNLSTFEAPLVNERDADVILSETCGA-----AEVLGE--YCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARR 450 (496)
T ss_dssp CCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT-----HHHHGG--GSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CcccccCChhHHHHHHhCCCCCCEEEeCCCCC-----HHHhCC--CEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 98 5 89999999997 89999875443 233422 356665 999999999999996678899999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhh
Q 036427 504 LKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++....+.+.+.++.+++.++.
T Consensus 451 ~~~V~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 451 RDAARPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp HHHHTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHhh
Confidence 9999999988888887766643
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-14 Score=130.56 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=113.2
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++.+.+.-.++.+.+++++|+.+.....+.+..+++++. ..+.++++++|.... ..+..+|++.+|+
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~-----~~~~~~~~~~g~~~~-------~~~~~~v~~~~~~ 76 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALA-----QIPQKVLWRFDGNKP-------DTLGLNTRLYKWI 76 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHT-----TSSSEEEEECCSSCC-------TTCCTTEEEESSC
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHH-----hCCCeEEEEECCcCc-------ccCCCcEEEecCC
Confidence 4455554333456778888887764334556666666664 224677777764421 1245689999999
Q ss_pred hhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCC
Q 036427 418 SKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGP 491 (536)
Q Consensus 418 ~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~ 491 (536)
++ .+++ ..||++|+++|++|++|||++|+|+|++|...+| ..|+..+.+.|.|..++ ++++|+++|.++++
T Consensus 77 ~~-~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q-~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~- 153 (170)
T 2o6l_A 77 PQ-NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQ-PDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIN- 153 (170)
T ss_dssp CH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred CH-HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhH-HHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHc-
Confidence 76 6777 8999999999999999999999999999987666 45899999999999886 88999999999999
Q ss_pred CHHHHHHHHHHHH
Q 036427 492 KIDELKAMSQNAL 504 (536)
Q Consensus 492 d~~~~~~m~~~a~ 504 (536)
++++++++.+.+.
T Consensus 154 ~~~~~~~a~~~~~ 166 (170)
T 2o6l_A 154 DPSYKENVMKLSR 166 (170)
T ss_dssp CHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHH
Confidence 8886666655443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=133.81 Aligned_cols=145 Identities=17% Similarity=0.051 Sum_probs=108.5
Q ss_pred CCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHH--cCCCCCCEEEecChh-
Q 036427 345 GMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLL--STDWKIPVQVKGFVS- 418 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~--~~~~~~~V~~~G~v~- 418 (536)
.++.++++++++|+....|+...+++++... +++++++ +|.++ ++.+.++ +.++.++|++.|+++
T Consensus 18 ~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i-~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~ 88 (177)
T 2f9f_A 18 KFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYI-VGWFSKGDHAERYARKIMKIAPDNVKFLGSVSE 88 (177)
T ss_dssp CCCCCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEE-EBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCH
T ss_pred ccCCCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEE-EecCccHHHHHHHHHhhhcccCCcEEEeCCCCH
Confidence 4567778899998887777777776666532 4566544 45543 4556666 556778999999995
Q ss_pred -hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-CCHHHHHHHHHHHhCC
Q 036427 419 -KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-KSPKEIANMVSQWFGP 491 (536)
Q Consensus 419 -~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-~d~~~La~~I~~ll~~ 491 (536)
++.++|+.||++|+++ | +++++|||++|+|||+++.++ ...+++ ...|.++ .|+++++++|.++++
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~------~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~- 161 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG------FKETVINEKTGYLVNADVNEIIDAMKKVSK- 161 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH------HHHHCCBTTTEEEECSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCC------HHHHhcCCCccEEeCCCHHHHHHHHHHHHh-
Confidence 5999999999999987 3 899999999999999998533 223444 4466665 599999999999998
Q ss_pred CHHH-HHHHHHHHHH
Q 036427 492 KIDE-LKAMSQNALK 505 (536)
Q Consensus 492 d~~~-~~~m~~~a~~ 505 (536)
+++. ++++++++++
T Consensus 162 ~~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 162 NPDKFKKDCFRRAKE 176 (177)
T ss_dssp CTTTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhc
Confidence 7765 6666666654
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.3e-12 Score=135.71 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=110.2
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----H--HHHHHHcCCCCCCEEE
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK----K--LANKLLSTDWKIPVQV 413 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~--l~~~l~~~~~~~~V~~ 413 (536)
..+.+.-.+++++|++++|+.+...... +..+++.+. ..+.++++++|... . +.+.+.+ ....++.+
T Consensus 285 ~~~wld~~~~~~vv~vs~GS~~~~~~~~-~~~~~~~l~-----~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v 357 (482)
T 2pq6_A 285 CLDWLESKEPGSVVYVNFGSTTVMTPEQ-LLEFAWGLA-----NCKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLI 357 (482)
T ss_dssp HHHHHTTSCTTCEEEEECCSSSCCCHHH-HHHHHHHHH-----HTTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEE
T ss_pred HHHHHhcCCCCceEEEecCCcccCCHHH-HHHHHHHHH-----hcCCcEEEEEcCCccccccccCcHhHHH-hcCCCEEE
Confidence 3444433345678999999877544444 555666664 24467888877431 0 1111111 02358999
Q ss_pred ecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh-hCCceeecC---CHHHHHHHHHH
Q 036427 414 KGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV-ENGCGKFSK---SPKEIANMVSQ 487 (536)
Q Consensus 414 ~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv-~~g~g~~~~---d~~~La~~I~~ 487 (536)
.+|++++ ++|++++ ++|+++|.+|++||+++|+|+|+.|...+|.. |+..++ +.|.|..+. +.++|.++|++
T Consensus 358 ~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~-na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 358 ASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPT-DCRFICNEWEIGMEIDTNVKREELAKLINE 435 (482)
T ss_dssp ESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECCSSCCHHHHHHHHHH
T ss_pred EeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHH-HHHHHHHHhCEEEEECCCCCHHHHHHHHHH
Confidence 9999876 5886655 59999999999999999999999999887765 999887 689999885 89999999999
Q ss_pred HhCCCHHHHHHHHHHHHH
Q 036427 488 WFGPKIDELKAMSQNALK 505 (536)
Q Consensus 488 ll~~d~~~~~~m~~~a~~ 505 (536)
+++ +++ .++|+++|++
T Consensus 436 ll~-~~~-~~~~r~~a~~ 451 (482)
T 2pq6_A 436 VIA-GDK-GKKMKQKAME 451 (482)
T ss_dssp HHT-SHH-HHHHHHHHHH
T ss_pred HHc-CCc-HHHHHHHHHH
Confidence 999 885 2444444443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=9.8e-12 Score=131.31 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=117.3
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK 397 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~ 397 (536)
++..+|.-..........+.++..+.+.-.+++++|++.+|+.+.... +.+..++..+.+ .+.+++++.|....
T Consensus 241 ~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~-~~~~el~~~l~~-----~~~~flw~~~~~~~ 314 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPP-HELTALAESLEE-----CGFPFIWSFRGDPK 314 (454)
T ss_dssp CEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCH-HHHHHHHHHHHH-----HCCCEEEECCSCHH
T ss_pred CEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCH-HHHHHHHHHHHh-----CCCeEEEEeCCcch
Confidence 577777532111001111123455566555667899999998775443 335666666652 34678888887641
Q ss_pred --HHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cce
Q 036427 398 --LANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCG 472 (536)
Q Consensus 398 --l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g 472 (536)
+.+.+.+ ....++.+.+|+++ .++|.+++ ++|+++|.++++||+++|+|+|+.|..++|.. |+..+++. |.|
T Consensus 315 ~~lp~~~~~-~~~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~-Na~~v~~~~g~G 391 (454)
T 3hbf_A 315 EKLPKGFLE-RTKTKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL-NTILTESVLEIG 391 (454)
T ss_dssp HHSCTTHHH-HTTTTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHTTSCSE
T ss_pred hcCCHhHHh-hcCCceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHH-HHHHHHHhhCee
Confidence 1111111 12458999999987 58999999 89999999999999999999999999887665 89989985 999
Q ss_pred eecC----CHHHHHHHHHHHhCCCH
Q 036427 473 KFSK----SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 473 ~~~~----d~~~La~~I~~ll~~d~ 493 (536)
..+. +.+++.++|+++++ ++
T Consensus 392 v~l~~~~~~~~~l~~av~~ll~-~~ 415 (454)
T 3hbf_A 392 VGVDNGVLTKESIKKALELTMS-SE 415 (454)
T ss_dssp EECGGGSCCHHHHHHHHHHHHS-SH
T ss_pred EEecCCCCCHHHHHHHHHHHHC-CC
Confidence 8774 78999999999998 75
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=9.1e-12 Score=133.01 Aligned_cols=166 Identities=14% Similarity=0.109 Sum_probs=108.7
Q ss_pred CCEEEeCCCCCCCCCCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC
Q 036427 317 SQIKVYGLPVRPSFVKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN 395 (536)
Q Consensus 317 ~ki~vignpv~~~~~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~ 395 (536)
.++..+|.......... ....+++.+.+.-.+++++|++.+|+...... +.+..+++.+. ..+.+++++++..
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~-----~~~~~~lw~~~~~ 307 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTC-EQLNELALGLA-----DSEQRFLWVIRSP 307 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCH-HHHHHHHHHHH-----HTTCEEEEEECCC
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCH-HHHHHHHHHHH-----hcCCcEEEEECCc
Confidence 36888886543321100 11122344444333456888888888765443 44566666665 2456787777653
Q ss_pred H--------------HH----HHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 396 K--------------KL----ANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 396 ~--------------~l----~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
. ++ .+.+.+......+.+.+|+++. ++|++++ ++|+++|.+|++||+++|+|+|+.|..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 308 SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred cccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 1 00 0000000001124556699875 8999888 799999999999999999999999998
Q ss_pred CccccCChhhH-hhCCceeecC-------CHHHHHHHHHHHhC
Q 036427 456 AGQEAGNVPYV-VENGCGKFSK-------SPKEIANMVSQWFG 490 (536)
Q Consensus 456 ~~~e~~na~~l-v~~g~g~~~~-------d~~~La~~I~~ll~ 490 (536)
.+|.. |+..+ .+.|+|..+. +.++|.++|+++++
T Consensus 387 ~DQ~~-na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 387 AEQKM-NAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp TTHHH-HHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred ccchH-HHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 87765 88887 5889998763 68999999999997
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-09 Score=116.53 Aligned_cols=267 Identities=9% Similarity=0.006 Sum_probs=160.7
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCCCcccccccccCCEEEEcCHHHHHHHHHhC
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
..++.+.|++.++||++-....+......++.++ .-|+- ++..-.. .--....|.+++-.... . . +.
T Consensus 338 ~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~R----pAPVQvs~lGyp~----TTGl~~iDY~i~D~~~~-~-~-~~- 405 (631)
T 3q3e_A 338 LEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTR----LAPIQAIALGHPA----TTHSDFIEYVIVEDDYV-G-S-EE- 405 (631)
T ss_dssp HHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSC----CSSEEEEECSSCS----CCCCTTCCEEEEEGGGC-C-C-GG-
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCC----CchheEeccCCCc----ccCcccCCEEEeCCCCC-C-c-cc-
Confidence 3577888999999999976555544333332211 24542 3322111 11134566666532110 0 0 11
Q ss_pred CCCCCEEEeCCC---CCCCCCCCCCchHHHHHHcCCCCC-CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEE
Q 036427 314 LQASQIKVYGLP---VRPSFVKPVRPKVELRRELGMDED-LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVL 389 (536)
Q Consensus 314 ~~~~ki~vignp---v~~~~~~~~~~~~~~r~~lgi~~~-~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~l 389 (536)
.-.+++..++.. .++....+ .+..++++++ ..+++.... ...|...+.++...+.+.+ .|+..++
T Consensus 406 ~ysEklirLP~~~~~~~p~~~~p------~r~~~~lp~~~G~v~Fg~fn-~~~Ki~p~~l~~WarIL~~----vP~s~L~ 474 (631)
T 3q3e_A 406 CFSETLLRLPKDALPYVPSALAP------EKVDYLLRENPEVVNIGIAS-TTMKLNPYFLEALKAIRDR----AKVKVHF 474 (631)
T ss_dssp GCSSEEEEECTTSSCCCCCTTCC------SSCCCCCCSCCSEEEEEEEE-CSTTCCHHHHHHHHHHHHH----CSSEEEE
T ss_pred CceeeEEECCCCccccCCcccCC------ccccccCCcCCCeEEEEECC-ccccCCHHHHHHHHHHHHh----CCCcEEE
Confidence 124677766642 22221111 1234566654 223322222 2356667777777777653 3555443
Q ss_pred -EEecCC----HHHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccc
Q 036427 390 -VICGRN----KKLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 390 -vi~G~~----~~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+.|.. ....+.+.+.++.+++.|.|.++ +....|+.+|+++-++ |++|.+|||++|+|||+.+......
T Consensus 475 l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~as 554 (631)
T 3q3e_A 475 HFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHE 554 (631)
T ss_dssp EEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHH
T ss_pred EEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHH
Confidence 235532 23444455556667899999985 6668899999999885 6899999999999999988554333
Q ss_pred cCChhhHhhCCcee--ecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGK--FSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP-----DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~--~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-----~~~~~i~~~i~~l~~~ 525 (536)
...+..+...|... +..|.++..+...+|.+ |++.+++++++.++.... ...+++.+.+.+++++
T Consensus 555 RvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~-D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 555 HIDEGLFKRLGLPEWLIANTVDEYVERAVRLAE-NHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHH-CHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHH
T ss_pred HhHHHHHHhcCCCcceecCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHH
Confidence 33445566677764 45799999999999999 999999999998876433 2234455555555554
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.1e-11 Score=116.02 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=99.1
Q ss_pred cCCCCCCCEEEEecCCCCCCcHHHHHHHHH-----HHhhhcccCCCCcEEEEEecCCHH-----HHHHHH--------c-
Q 036427 344 LGMDEDLPAVLLMGGGEGMGPIEATARALG-----NALYDENLGEPIGQVLVICGRNKK-----LANKLL--------S- 404 (536)
Q Consensus 344 lgi~~~~~~il~~gg~~g~k~~~~~l~al~-----~~l~~~~~~~~~~~~lvi~G~~~~-----l~~~l~--------~- 404 (536)
++.+++++.|+++||+.. .+.+++..+. +.+.+ ....++++++|.... +.+.+. .
T Consensus 22 ~~~~~~~~~VlVtgGS~~--~~n~li~~vl~~~~l~~L~~----~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 22 LEGIIEEKALFVTCGATV--PFPKLVSCVLSDEFCQELIQ----YGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp --CCCCSCCEEEECCSCC--SCHHHHHHHTSHHHHHHHHT----TTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSS
T ss_pred cCCCCCCCEEEEEcCCch--HHHHHHHHHHHHHHHHHHhc----CCCeEEEEEECCCchhhHHHHHHhhhcccccccccc
Confidence 455667788999999863 3455554442 44431 122678888997642 122220 0
Q ss_pred --------------CCCCCCEEEecChhhHHHHHh-hcCeEEECCChHHHHHHHHhCCcEEEeccC---CccccCChhhH
Q 036427 405 --------------TDWKIPVQVKGFVSKMEEAMG-ACDCIITKAGPGTIAEAMIRGLPIILNDFI---AGQEAGNVPYV 466 (536)
Q Consensus 405 --------------~~~~~~V~~~G~v~~l~~ll~-~aDv~V~~sG~~tllEAma~GlPVI~~~~~---~~~e~~na~~l 466 (536)
.....++...+|+++|.++|+ .||++|+++|.+|++|++++|+|.|++|.. .++|..|++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 001235678899999999999 999999999999999999999999999985 34566689999
Q ss_pred hhCCceeecCCHHHHHHHHHHH
Q 036427 467 VENGCGKFSKSPKEIANMVSQW 488 (536)
Q Consensus 467 v~~g~g~~~~d~~~La~~I~~l 488 (536)
.+.|.+..+ +++.|.++|.++
T Consensus 176 ~~~G~~~~~-~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VELGYVWSC-APTETGLIAGLR 196 (224)
T ss_dssp HHHSCCCEE-CSCTTTHHHHHH
T ss_pred HHCCCEEEc-CHHHHHHHHHHH
Confidence 999988766 778888888777
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.3e-06 Score=86.69 Aligned_cols=268 Identities=13% Similarity=0.079 Sum_probs=132.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||+..+. -|..-.+..+.++|++++| +.++.++..... ..+.+..|.....+.......
T Consensus 1 mkILii~~~~-~GD~i~~~p~l~~Lk~~~P-~~~i~~l~~~~~-------------~~l~~~~p~i~~v~~~~~~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSW-VGDMMMSQSLYRTLQARYP-QAIIDVMAPAWC-------------RPLLSRMPEVNEAIPMPLGHG--- 62 (348)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHHST-TCEEEEEECGGG-------------HHHHTTCTTEEEEEEC--------
T ss_pred CeEEEEeccc-cCHHHHHHHHHHHHHHHCC-CCEEEEEECcch-------------hHHHhcCCccCEEEEecCCcc---
Confidence 7999987653 6999999999999999988 567755432110 011222221111111100000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcccccccccCCEEEEc--
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCHPTWFHKLVTRCYCP-- 301 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~~~~~~~~~d~vi~~-- 301 (536)
........++.+.+++.+||+++..+..... ..+++..+ +|. +.+..+.. + ...+.....
T Consensus 63 ----~~~~~~~~~l~~~l~~~~~D~vid~~~~~~s--a~~~~~~~----~~~~ig~~~~~~-----~--~~~~~~~~~~~ 125 (348)
T 1psw_A 63 ----ALEIGERRKLGHSLREKRYDRAYVLPNSFKS--ALVPLFAG----IPHRTGWRGEMR-----Y--GLLNDVRVLDK 125 (348)
T ss_dssp ------CHHHHHHHHHHTTTTTCSEEEECSCCSGG--GHHHHHTT----CSEEEEECTTTC-----T--TTCTEEECCCT
T ss_pred ----ccchHHHHHHHHHHHhcCCCEEEECCCChHH--HHHHHHhC----CCEEeccCCCcc-----c--ccccccccCCC
Confidence 0111223466677888899999965442221 23344444 454 23322211 0 111111110
Q ss_pred --CHHHHHHHHHh----CCCCC--CEE-EeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-C-CCCcH-HHHH
Q 036427 302 --TADVAKRAMKA----GLQAS--QIK-VYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-E-GMGPI-EATA 369 (536)
Q Consensus 302 --S~~~~~~l~~~----g~~~~--ki~-vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~-g~k~~-~~~l 369 (536)
.....+.+.+. |+.+. .+. .++. +.........+++++.++++.+.++|++.-|+ . ..+.. .+.+
T Consensus 126 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~---p~l~~~~~~~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~ 202 (348)
T 1psw_A 126 EAWPLMVERYIALAYDKGIMRTAQDLPQPLLW---PQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHY 202 (348)
T ss_dssp TTCCSHHHHHHHTTSCGGGCSSGGGSCSSCCC---CCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHH
T ss_pred CCCchHHHHHHHHHhhcccccccccCCcccCC---ceeecCHHHHHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHH
Confidence 11123333332 21000 000 0111 11111112234566778887566666655444 3 22332 4455
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCC---CCCE-EEecCh--hhHHHHHhhcCeEEEC-CChHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDW---KIPV-QVKGFV--SKMEEAMGACDCIITK-AGPGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~---~~~V-~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllE 441 (536)
.++++.+.+ .+.+++++.|..+ +..+.+.+.-. ..++ .+.|.. .++.++++.||++|+. ||++.+
T Consensus 203 ~~l~~~L~~-----~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~Hl-- 275 (348)
T 1psw_A 203 AELAKQLID-----EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHV-- 275 (348)
T ss_dssp HHHHHHHHH-----TTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHH--
T ss_pred HHHHHHHHH-----CCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHHH--
Confidence 666666642 2566655443333 23333433210 1234 556654 5899999999999998 454443
Q ss_pred HHHhCCcEEEeccCCc
Q 036427 442 AMIRGLPIILNDFIAG 457 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~ 457 (536)
|+++|+|+|++-...+
T Consensus 276 Aaa~g~P~v~lfg~t~ 291 (348)
T 1psw_A 276 AAALNRPLVALYGPSS 291 (348)
T ss_dssp HHHTTCCEEEEESSSC
T ss_pred HHHcCCCEEEEECCCC
Confidence 9999999999865544
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=8.6e-06 Score=90.92 Aligned_cols=178 Identities=13% Similarity=0.072 Sum_probs=119.8
Q ss_pred HHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCC-CCCEEEecC
Q 036427 341 RRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDW-KIPVQVKGF 416 (536)
Q Consensus 341 r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~-~~~V~~~G~ 416 (536)
|..+|++++..++.++ ....|-..+.+....+.++. .|+.++++...... .+.+.+++.++ .++|.|.+.
T Consensus 514 R~~~gLp~~~v~f~~f--N~~~Ki~p~~~~~W~~IL~~----vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~ 587 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNF--NQLYKIDPSTLQMWANILKR----VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPV 587 (723)
T ss_dssp GGGGTCCTTSEEEECC--SCGGGCCHHHHHHHHHHHHH----CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred hhhcCCCCCCEEEEeC--CccccCCHHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCC
Confidence 5567888775333222 22234445666666666653 47776655543322 35556666665 467999998
Q ss_pred hh--hHHHHHhhcCeEEEC---CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 417 VS--KMEEAMGACDCIITK---AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 417 v~--~l~~ll~~aDv~V~~---sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
.+ +.-..|+.+|+++=+ +|+.|.+||+.+|+|||+.+.........+..+...|..-++ .|.++..+...+|-+
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGT 667 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhc
Confidence 74 556778899999865 378999999999999999885443334456666677776554 588998888889988
Q ss_pred CCHHHHHHHHHHHHHh---cCCchHHHHHHHHHHHHhh
Q 036427 491 PKIDELKAMSQNALKL---ARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 491 ~d~~~~~~m~~~a~~~---a~~~~~~~i~~~i~~l~~~ 525 (536)
|++.+.++++.-++. ..-+...+.++.+++.+++
T Consensus 668 -d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 668 -DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp -CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH
Confidence 999998888766543 2235666677777665543
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=98.52 E-value=3e-05 Score=78.88 Aligned_cols=268 Identities=12% Similarity=0.069 Sum_probs=137.6
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
..+|||||+..+- -|..-.+..+.++|++.+| +.+|.++...... + +.+..|.....+.......
T Consensus 6 l~~~~iLvi~~~~-lGD~i~~~P~l~~L~~~~P-~a~I~~l~~~~~~-~------------l~~~~p~vd~vi~~~~~~~ 70 (349)
T 3tov_A 6 LDYKRIVVTFLMH-LGDVILTTPFLEVLRKAAP-HSHITYVIDEKLQ-Q------------VMEYNPNIDELIVVDKKGR 70 (349)
T ss_dssp CTTCEEEEECCCC-HHHHHTTHHHHHHHHHHCT-TSEEEEEEEGGGG-G------------GTSSCTTCSEEEEECCSSH
T ss_pred CCCCEEEEEecCc-ccHHHHHHHHHHHHHHHCC-CCEEEEEECcchh-H------------HHhcCCCccEEEEeCcccc
Confidence 4568999998654 6999999999999999988 4566443221110 0 1122222221111110000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCCCcccccccccCCEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLSTCHPTWFHKLVTRCY 299 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~~~~~~~~~~~~d~vi 299 (536)
........++.+.|++.++ |+++..+..... ..+....| +|.. .+.... .....+..+
T Consensus 71 -------~~~~~~~~~l~~~Lr~~~y~D~vidl~~~~rs--~~l~~~~~----a~~riG~~~~~-------~~~~~~~~~ 130 (349)
T 3tov_A 71 -------HNSISGLNEVAREINAKGKTDIVINLHPNERT--SYLAWKIH----APITTGMSHFL-------FRPFMTKYT 130 (349)
T ss_dssp -------HHHHHHHHHHHHHHHHHCCCCEEEECCCSHHH--HHHHHHHC----CSEEEECCCTT-------TGGGCSEEC
T ss_pred -------cccHHHHHHHHHHHhhCCCCeEEEECCCChHH--HHHHHHhC----CCeEEecCCCC-------ccccccccc
Confidence 0112223456677888999 999987654322 22334444 4432 221111 111112211
Q ss_pred Ec-------CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCch---HHHHHHcCCCCCCCEEEEe-cCCCCCCcH-HH
Q 036427 300 CP-------TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPK---VELRRELGMDEDLPAVLLM-GGGEGMGPI-EA 367 (536)
Q Consensus 300 ~~-------S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~---~~~r~~lgi~~~~~~il~~-gg~~g~k~~-~~ 367 (536)
.. .+...+.+...|++.. .......+.+.... +++.+.+|++.+.++|++. |++...+.. .+
T Consensus 131 ~~~~~~~h~v~r~~~ll~~lg~~~~------~~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~ 204 (349)
T 3tov_A 131 RLDRKTRHAADMYINVLEQLGVTDT------SNSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAE 204 (349)
T ss_dssp CCCTTTSCHHHHHHHHHHHTTCCCC------CCCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHH
T ss_pred cCCCCCccHHHHHHHHHHHhCCCcc------CCCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHH
Confidence 11 1122222333454310 00111111111111 2234456787777777654 444444443 45
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHH
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAM 443 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAm 443 (536)
.+.++++.+.+ .+.++++++|..+ +..+.+.+.-....+.+.|.. .++..+++.||++|+. ||++-+ |.
T Consensus 205 ~~~~l~~~l~~-----~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~Hl--Aa 277 (349)
T 3tov_A 205 RFAHVADYFGR-----LGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHV--GI 277 (349)
T ss_dssp HHHHHHHHHHH-----HTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHH--HH
T ss_pred HHHHHHHHHHh-----CCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHH--HH
Confidence 56666666652 2456655444443 333444332112335666654 5899999999999998 676555 89
Q ss_pred HhCCcEEEeccCCc
Q 036427 444 IRGLPIILNDFIAG 457 (536)
Q Consensus 444 a~GlPVI~~~~~~~ 457 (536)
++|+|+|++-...+
T Consensus 278 a~g~P~v~lfg~t~ 291 (349)
T 3tov_A 278 SQGVPIVALYGPSN 291 (349)
T ss_dssp TTTCCEEEECSSCC
T ss_pred hcCCCEEEEECCCC
Confidence 99999999865443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=0.00021 Score=71.52 Aligned_cols=301 Identities=11% Similarity=0.009 Sum_probs=143.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||||++..+. -|..-.+..+.++|++++| +.++.+...... ..+.+..|.....+...... +.+
T Consensus 1 ~~ILii~~~~-iGD~i~~~p~l~~Lk~~~P-~a~I~~l~~~~~-------------~~l~~~~p~vd~vi~~~~~~-~~~ 64 (326)
T 2gt1_A 1 MRVLIVKTSS-MGDVLHTLPALTDAQQAIP-GIKFDWVVEEGF-------------AQIPSWHAAVERVIPVAIRR-WRK 64 (326)
T ss_dssp CEEEEECCCC-HHHHHHHHHHHHHHHHHST-TCEEEEEEEGGG-------------THHHHTSTTEEEEEEECHHH-HHT
T ss_pred CeEEEEeccc-cchHHhHHHHHHHHHHhCC-CCEEEEEEehhh-------------hHHHhcCCCCCEEEEccHHH-hhh
Confidence 7999987664 6999999999999999988 466654432110 00122222111111110000 000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc--C
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP--T 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~--S 302 (536)
..+.........++.+.+++.++|+++....... ....+.+..+ .+.+.+.... ....|.....+..+.. .
T Consensus 65 ~~~~~~~~~~~~~~~~~lr~~~~D~vidl~~~~~-s~~~~~~l~~----~~~ig~~~~~--~~~~~~~~~~~~~~~~~~~ 137 (326)
T 2gt1_A 65 AWFSAPIKAERKAFREALQAKNYDAVIDAQGLVK-SAALVTRLAH----GVKHGMDWQT--AREPLASLFYNRKHHIAKQ 137 (326)
T ss_dssp TTTSHHHHHHHHHHHHHHHHSBCSEEEECSCCHH-HHHHTGGGSB----SCEEEECTTT--SSSGGGGGGCSEEECCCSS
T ss_pred ccchHHHHHHHHHHHHHHhccCCCEEEECCccHH-HHHHHHHHcC----CcEEccCcCc--ccchhHHhhhccccCCCcC
Confidence 0000111222345666788899999997654321 1112223223 2333333221 0011111222333321 1
Q ss_pred HHHHHH----H-HHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEE-ecCCCCCCcH-HHHHHHHHHH
Q 036427 303 ADVAKR----A-MKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLL-MGGGEGMGPI-EATARALGNA 375 (536)
Q Consensus 303 ~~~~~~----l-~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~-~gg~~g~k~~-~~~l~al~~~ 375 (536)
....+. + ...|++... ..+. +.. .++..++.+.. +.++|++ .|++...+.. .+.+.++++.
T Consensus 138 ~h~~~~~~~ll~~~lg~~~~~-------~~~~-~~~---~~~~~~~~~~~-~~~~i~l~pga~~~~k~wp~~~~~~l~~~ 205 (326)
T 2gt1_A 138 QHAVERTRELFAKSLGYSKPQ-------TQGD-YAI---AQHFLTNLPTD-AGEYAVFLHATTRDDKHWPEEHWRELIGL 205 (326)
T ss_dssp SCHHHHHHHHHHHHHTCCCCS-------SCCC-CCC---HHHHHTTCCTT-TTSEEEEECCCSSGGGSCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCCCC-------CCcc-ccc---Cchhhhhcccc-CCCEEEEEeCCCCccccCCHHHHHHHHHH
Confidence 112221 2 123544211 0111 111 11222233333 3455544 4444333332 4566667666
Q ss_pred hhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHHHhCCcEE
Q 036427 376 LYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAMIRGLPII 450 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAma~GlPVI 450 (536)
+. ..+.+++++.|... +..+.+.+. . .++.+.|.. .++.++++.||++|+. ||++-+ |.++|+|+|
T Consensus 206 L~-----~~~~~vvl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sl~el~ali~~a~l~I~~DSG~~Hl--Aaa~g~P~v 276 (326)
T 2gt1_A 206 LA-----DSGIRIKLPWGAPHEEERAKRLAEG-F-AYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHL--TAALDRPNI 276 (326)
T ss_dssp TT-----TTCCEEEECCSSHHHHHHHHHHHTT-C-TTEEECCCCCHHHHHHHHHTCSEEEEESSHHHHH--HHHTTCCEE
T ss_pred HH-----HCCCcEEEecCCHHHHHHHHHHHhh-C-CcccccCCCCHHHHHHHHHhCCEEEecCCcHHHH--HHHcCCCEE
Confidence 64 23566554435322 223344332 1 346677754 5999999999999998 676655 778999999
Q ss_pred EeccCCccccC----ChhhHhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 451 LNDFIAGQEAG----NVPYVVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 451 ~~~~~~~~e~~----na~~lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
++-...+...+ ....++... ...+. +++++.+++.++++
T Consensus 277 ~lfg~t~p~~~~P~~~~~~~~~~~-~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 277 TVYGPTDPGLIGGYGKNQMVCRAP-GNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp EEESSSCHHHHCCCSSSEEEEECG-GGCGGGCCHHHHHHHHHHTTT
T ss_pred EEECCCChhhcCCCCCCceEecCC-cccccCCCHHHHHHHHHHHHH
Confidence 98544332210 000011100 01112 78999999998887
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=7.9e-05 Score=83.38 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=137.1
Q ss_pred cCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCC---CchHHHHHHcCCCCCCCEEEEecCCCCCC------
Q 036427 294 LVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPV---RPKVELRRELGMDEDLPAVLLMGGGEGMG------ 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~---~~~~~~r~~lgi~~~~~~il~~gg~~g~k------ 363 (536)
..|.+++.++...+.+.+ .++++.++..+|.|-.+.++... ...+++++.+++++++++||++....+..
T Consensus 478 ~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~ 557 (729)
T 3l7i_A 478 RWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGK 557 (729)
T ss_dssp TCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGS
T ss_pred cCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccc
Confidence 468999999999888776 47777889999998765544222 12456888999999999999876533211
Q ss_pred ---cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHH
Q 036427 364 ---PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ---~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tll 440 (536)
.....+..+.+.+. .+. .++.-.++...+.+........+.......++.++|..||++|+-- +.++.
T Consensus 558 ~~~~~~~~~~~l~~~l~------~~~--~li~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lITDy-SSv~f 628 (729)
T 3l7i_A 558 YLFELKIDLDNLYKELG------DDY--VILLRMHYLISNALDLSGYENFAIDVSNYNDVSELFLISDCLITDY-SSVMF 628 (729)
T ss_dssp SCCCCTTCHHHHHHHHT------TTE--EEEECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEESS-CTHHH
T ss_pred cccchhhHHHHHHHHcC------CCe--EEEEecCcchhccccccccCCcEEeCCCCcCHHHHHHHhCEEEeec-hHHHH
Confidence 11122444555442 333 3333445533322221223445554544468999999999999863 35789
Q ss_pred HHHHhCCcEEEeccCCccccCCh-h---hHhhCCceeecCCHHHHHHHHHHHhCCCHH-H---HHHHHHHHHHhcCCchH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNV-P---YVVENGCGKFSKSPKEIANMVSQWFGPKID-E---LKAMSQNALKLARPDAV 512 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na-~---~lv~~g~g~~~~d~~~La~~I~~ll~~d~~-~---~~~m~~~a~~~a~~~~~ 512 (536)
|++..++|||.....-..-..+. . ...+.--|.++.+.++|.++|..... .++ . ++++.+.-..+....++
T Consensus 629 D~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~dg~as 707 (729)
T 3l7i_A 629 DYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDK-VQQQYQEKIDAFYDRFCSVDNGKAS 707 (729)
T ss_dssp HHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHH-HHHHTHHHHHHHHHHHSTTCCSCHH
T ss_pred hHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhhc-cchhHHHHHHHHHHHhCCccCChHH
Confidence 99999999999865322111000 0 01122234566799999999987764 322 2 22222222234456899
Q ss_pred HHHHHHHHHHHhh
Q 036427 513 FRIVQDLHELVRQ 525 (536)
Q Consensus 513 ~~i~~~i~~l~~~ 525 (536)
+++++.|.+...+
T Consensus 708 ~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 708 QYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcC
Confidence 9999999876654
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=89.03 E-value=0.93 Score=40.72 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=41.2
Q ss_pred HHHHhhcCeEE-ECCChHHHH---HHHHhCCcEEEeccCCccccCChhhHhhC--CceeecCCHHHHHHHHHHHhC
Q 036427 421 EEAMGACDCII-TKAGPGTIA---EAMIRGLPIILNDFIAGQEAGNVPYVVEN--GCGKFSKSPKEIANMVSQWFG 490 (536)
Q Consensus 421 ~~ll~~aDv~V-~~sG~~tll---EAma~GlPVI~~~~~~~~e~~na~~lv~~--g~g~~~~d~~~La~~I~~ll~ 490 (536)
.-+...||.+| +|+|.+|+. |++..++||++.+... . ...++-+. ..-.+.+|++++.+.+.++++
T Consensus 102 ~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~-~---~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 102 NINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP-E---AEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp CCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH-H---HHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc-c---ccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 34456788755 466666554 5788999999998621 0 11122222 223345699999998888764
|
| >3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=86.85 E-value=1.4 Score=39.06 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=44.4
Q ss_pred HHHHhhcCeEEEC--C---ChHHHHH---HHHhCCcEEEeccCCccc-cCChh---hHhhC-----------------Cc
Q 036427 421 EEAMGACDCIITK--A---GPGTIAE---AMIRGLPIILNDFIAGQE-AGNVP---YVVEN-----------------GC 471 (536)
Q Consensus 421 ~~ll~~aDv~V~~--s---G~~tllE---Ama~GlPVI~~~~~~~~e-~~na~---~lv~~-----------------g~ 471 (536)
.+.+..||++|.- . -.+|.+| |.+.|+||++.-...-+. ..+.. .+.+. .+
T Consensus 64 ~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~ 143 (162)
T 3ehd_A 64 TENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLN 143 (162)
T ss_dssp HHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTT
T ss_pred HHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhC
Confidence 3668999998863 2 2689999 899999999986431100 00101 11111 25
Q ss_pred eeecCCHHHHHHHHHHHh
Q 036427 472 GKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 472 g~~~~d~~~La~~I~~ll 489 (536)
|.++.+.+++.+.|...+
T Consensus 144 g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 144 GRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp EEEESSHHHHHHHHHHTC
T ss_pred CeEEeCHHHHHHHHHHHh
Confidence 677789999998887765
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=86.29 E-value=40 Score=37.22 Aligned_cols=160 Identities=11% Similarity=0.009 Sum_probs=94.4
Q ss_pred cCCEEEEcCHHHHHHHHH------hCCCCCCEEEeCCCCCCCCCC----CC---------------------------C-
Q 036427 294 LVTRCYCPTADVAKRAMK------AGLQASQIKVYGLPVRPSFVK----PV---------------------------R- 335 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~------~g~~~~ki~vignpv~~~~~~----~~---------------------------~- 335 (536)
.++.|-.+|+-..+.++. +..-+.++.-+-|++++..+. |. .
T Consensus 402 ~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~ 481 (796)
T 2c4m_A 402 AAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYAD 481 (796)
T ss_dssp HCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGG
T ss_pred hcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCC
Confidence 456778888888877664 222356788888999877662 11 0
Q ss_pred c--------------hHH----HHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEE
Q 036427 336 P--------------KVE----LRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVI 391 (536)
Q Consensus 336 ~--------------~~~----~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi 391 (536)
+ +.+ +++++|+ +++.+++.++.+....|...-.+......+.+.. .+|. ...+++
T Consensus 482 d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~-~~~~~~~~p~q~If 560 (796)
T 2c4m_A 482 DKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIK-EDGLTDIPARTVIF 560 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHH-TSCCCSSCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHh-hCCCCCCCCeEEEE
Confidence 1 111 2445565 4567777788887777776552333333332211 1221 234677
Q ss_pred ecCCH-------HHHHHHHcC--------CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhC
Q 036427 392 CGRNK-------KLANKLLST--------DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRG 446 (536)
Q Consensus 392 ~G~~~-------~l~~~l~~~--------~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~G 446 (536)
+|++. .+.+.+.+. .... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|
T Consensus 561 ~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG 640 (796)
T 2c4m_A 561 GAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNG 640 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTT
T ss_pred EecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 78764 122222221 3444 566654 43 35567789999999987 2 46667799999
Q ss_pred CcEEEecc
Q 036427 447 LPIILNDF 454 (536)
Q Consensus 447 lPVI~~~~ 454 (536)
.+.|.+--
T Consensus 641 aL~iGtLD 648 (796)
T 2c4m_A 641 ALTLGTMD 648 (796)
T ss_dssp CEEEEESS
T ss_pred CeEEeccC
Confidence 99997653
|
| >1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=84.62 E-value=1.2 Score=40.68 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=41.9
Q ss_pred hhHHHHHhhcCeEEE-CCChHHH---HHHHHhCCcEEEeccCCccccCChhhHhhCC---------ceeecCCHHHHHHH
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTI---AEAMIRGLPIILNDFIAGQEAGNVPYVVENG---------CGKFSKSPKEIANM 484 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tl---lEAma~GlPVI~~~~~~~~e~~na~~lv~~g---------~g~~~~d~~~La~~ 484 (536)
..-.-+...||.+|. |+|.+|+ .||+..++||++.+..+.... ....+++.| .-.+++|++++.+.
T Consensus 110 ~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~g~w~~-~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~ 188 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTD-RISQVLIDGKYLDNRRIVEIHQAWTVEEAVQI 188 (195)
T ss_dssp HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHH-HGGGGCBTTTBSSTTCCSCEEEESSHHHHHHH
T ss_pred HHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCCCccHH-HHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHH
Confidence 344566778997554 5566655 458889999999975332110 011222222 12234589999888
Q ss_pred HHHHh
Q 036427 485 VSQWF 489 (536)
Q Consensus 485 I~~ll 489 (536)
|.+++
T Consensus 189 l~~~~ 193 (195)
T 1rcu_A 189 IEQIL 193 (195)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 76543
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=84.56 E-value=17 Score=40.26 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=63.5
Q ss_pred HHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCCH-------HHHHHHHcC---
Q 036427 342 RELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRNK-------KLANKLLST--- 405 (536)
Q Consensus 342 ~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~~-------~l~~~l~~~--- 405 (536)
++.|+ +++.+++.++.+...+|...-++......+.+.. .++. ...++++|++. .+.+.+.+.
T Consensus 540 ~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~-~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~ 618 (824)
T 2gj4_A 540 REYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDV 618 (824)
T ss_dssp HHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHH-hCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHH
Confidence 34565 4566777788887777776544222223332110 1221 12457778764 122222221
Q ss_pred -----CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhCCcEEEec
Q 036427 406 -----DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 406 -----~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~GlPVI~~~ 453 (536)
.... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|.+.|++-
T Consensus 619 in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtl 681 (824)
T 2gj4_A 619 VNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTM 681 (824)
T ss_dssp HTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECS
T ss_pred hccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEe
Confidence 1234 566654 43 34567789999999987 1 455677999999999965
|
| >1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A* | Back alignment and structure |
|---|
Probab=83.81 E-value=0.99 Score=40.17 Aligned_cols=63 Identities=11% Similarity=0.200 Sum_probs=38.7
Q ss_pred hHHHHHhhcCeEEE--C-C--ChHHHHH---HHHhCCcEEEec-cCCccccCChhhHhhCCceeec---CCHHHHH
Q 036427 419 KMEEAMGACDCIIT--K-A--GPGTIAE---AMIRGLPIILND-FIAGQEAGNVPYVVENGCGKFS---KSPKEIA 482 (536)
Q Consensus 419 ~l~~ll~~aDv~V~--~-s--G~~tllE---Ama~GlPVI~~~-~~~~~e~~na~~lv~~g~g~~~---~d~~~La 482 (536)
++ +.+..||++|. . . -++|..| |.+.|+|||+.. ..+.........++..+...++ .+.++|+
T Consensus 75 D~-~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~~~~d~~~~~~~NlMl~~~~~~~~~~~~~~~~l~ 149 (167)
T 1s2d_A 75 DL-TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVPFTEHPEKEKKMNLMIAQGVTTIIDGNTEFEKLA 149 (167)
T ss_dssp HH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEEECSCTTSCCEECHHHHHHCSEECCTTTSGGGGG
T ss_pred HH-HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEEecCCcccCCcEeeeecCcccEEecCCCCHHHHh
Confidence 44 56899999887 2 1 3789999 999999999995 3322211222234555555444 3555443
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=81.13 E-value=23 Score=39.15 Aligned_cols=184 Identities=10% Similarity=-0.036 Sum_probs=103.3
Q ss_pred cCCEEEEcCHHHHHHHHH------hCCCCCCEEEeCCCCCCCCCC----C---------------------------CCc
Q 036427 294 LVTRCYCPTADVAKRAMK------AGLQASQIKVYGLPVRPSFVK----P---------------------------VRP 336 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~------~g~~~~ki~vignpv~~~~~~----~---------------------------~~~ 336 (536)
.++.|-.+|+-..+.++. +..-+.++.-+-|++++..+. | ..+
T Consensus 413 ~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d 492 (796)
T 1l5w_A 413 GGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADD 492 (796)
T ss_dssp HSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGC
T ss_pred hcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCC
Confidence 556777888888877654 222356788888888654331 0 000
Q ss_pred --------------hHH----HHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEe
Q 036427 337 --------------KVE----LRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVIC 392 (536)
Q Consensus 337 --------------~~~----~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~ 392 (536)
+.+ +++++|+. ++.+++.++.+...+|...-.+......+.+.. .+|. ...++++
T Consensus 493 ~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~-~~~~~~~~p~q~If~ 571 (796)
T 1l5w_A 493 AKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIR-ENPQADRVPRVFLFG 571 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-TCTTCCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHh-cCCCCCCCCeEEEEE
Confidence 112 24556764 566777778777777776542333333332211 2322 2346777
Q ss_pred cCCH-------HHHHHHHcC--------CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhCC
Q 036427 393 GRNK-------KLANKLLST--------DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRGL 447 (536)
Q Consensus 393 G~~~-------~l~~~l~~~--------~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~Gl 447 (536)
|++. .+.+.+.+. .... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|.
T Consensus 572 GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGa 651 (796)
T 1l5w_A 572 AKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGA 651 (796)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTC
T ss_pred ecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCC
Confidence 8764 122222221 2344 566654 43 35567789999999987 1 456677999999
Q ss_pred cEEEeccCCccccCChhhHhh--CCceeecC-CHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVE--NGCGKFSK-SPKEIAN 483 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~--~g~g~~~~-d~~~La~ 483 (536)
+.|.+--+... +...+ .+.|+++. +++++.+
T Consensus 652 L~iGtLDGanv-----Ei~e~vG~~NgF~FG~~~~ev~~ 685 (796)
T 1l5w_A 652 LTVGTLDGANV-----EIAEKVGEENIFIFGHTVEQVKA 685 (796)
T ss_dssp EEEECSCTTHH-----HHHHHHCGGGSEECSCCHHHHHH
T ss_pred eeecCcCCeee-----ehhhccCCCcEEEecCCHHHHHH
Confidence 99965533322 22222 34566664 6666653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 536 | ||||
| d1f0ka_ | 351 | c.87.1.2 (A:) Peptidoglycan biosynthesis glycosylt | 5e-11 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 2e-07 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 5e-07 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 2e-06 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-04 |
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Length = 351 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Score = 62.0 bits (149), Expect = 5e-11
Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Query: 377 YDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGP 436
LG+ + +++ + + + +V F+ M A D ++ ++G
Sbjct: 199 VAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGA 258
Query: 437 GTIAEAMIRGLPIILNDF--IAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFG 490
T++E GLP + F Q+ N + + G K + S +AN ++ W
Sbjct: 259 LTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSR 318
Query: 491 PKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524
+ L M++ A + PDA R+ ++ + R
Sbjct: 319 ---ETLLTMAERARAASIPDATERVANEVSRVAR 349
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 50.9 bits (120), Expect = 2e-07
Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 11/121 (9%)
Query: 411 VQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG 470
G V+ + G +I G GT A G P IL +A Q V E G
Sbjct: 287 CFAIGEVN-HQVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPY-YAGRVAELG 344
Query: 471 CGKFSK----SPKEIANMVSQWFGPKIDE-LKAMSQNALKLARPDAVFRIVQDLHELVRQ 525
G + ++ ++ P+ A++ A ++ + V +
Sbjct: 345 VGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLL----DAVSR 400
Query: 526 R 526
Sbjct: 401 E 401
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 49.7 bits (117), Expect = 5e-07
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 9/119 (7%)
Query: 411 VQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG 470
V+ + +I GT A G+P ++ Q V G
Sbjct: 288 CFAIDEVN-FQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPY-FAGRVAALG 345
Query: 471 CG----KFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525
G + + + ++ ++ P E +A ++ + D + V +
Sbjct: 346 IGVAHDGPTPTFESLSAALTTVLAP---ETRARAEAVAGMVLTDGAAAAADLVLAAVGR 401
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 48.1 bits (113), Expect = 2e-06
Identities = 41/253 (16%), Positives = 71/253 (28%), Gaps = 25/253 (9%)
Query: 286 CHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELG 345
+ + L A + P V+ + R L
Sbjct: 151 DAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPL- 209
Query: 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG--EPIGQVLVICGRNKKLANKLL 403
+L A L G +++R + G+ +V+ L
Sbjct: 210 -SAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPDD 268
Query: 404 STDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA---GQEA 460
D V G V+ ++E G I GT AM G+P I+ + ++A
Sbjct: 269 GAD----CFVVGEVN-LQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQA 323
Query: 461 GNVPYVVENGCG----KFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLA---RPDAVF 513
+ V E G G + ++ + P+ + A +A R D
Sbjct: 324 YHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPE------IRARATTVADTIRADGTT 377
Query: 514 RIVQDLHELVRQR 526
Q L + V
Sbjct: 378 VAAQLLFDAVSLE 390
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 40.2 bits (92), Expect = 5e-04
Identities = 54/379 (14%), Positives = 100/379 (26%), Gaps = 54/379 (14%)
Query: 188 HTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKY-- 245
+ + + + G L YG P A T + + L++
Sbjct: 62 QVKVSYEERGNLRIYRIGGGLLDSEDVYG--PGWDGLIRKAVTFGRASVLLLNDLLREEP 119
Query: 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADV 305
PD++ V L K VFT + S +FH+ P D+
Sbjct: 120 LPDVVHFHDW--HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDI 177
Query: 306 -----------AKRAMKAGLQASQIKVYGLPVRPSFVKP-----------------VRPK 337
+ G + + K
Sbjct: 178 DPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERK 237
Query: 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK 397
L + GMDE + + + G ++ L + E +I G+
Sbjct: 238 KSLLSKFGMDEGVTFMFIGRFDRGQKGVD---VLLKAIEILSSKKEFQEMRFIIIGKGDP 294
Query: 398 LANKLLSTDWKIPVQV-----KGFVSKMEEAMGACDCII----TKAGPGTIAEAMIRGLP 448
+ + V + E G+ D +I + EAM G
Sbjct: 295 ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAI 354
Query: 449 IILNDFIAGQEAGNVPYVVENGCGKF--SKSPKEIANMVSQWFGPKIDELKAMSQNALKL 506
I + G + ++ N G + P E+AN + + +L +N K
Sbjct: 355 PIASA------VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKR 408
Query: 507 ARPDAVFRIVQDLHELVRQ 525
A + + + +
Sbjct: 409 AMSFSWEKSAERYVKAYTG 427
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 536 | |||
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.93 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.93 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.9 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.8 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.8 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.7 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.67 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.64 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.62 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 99.56 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.46 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.43 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.43 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 99.42 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 99.31 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 99.29 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 98.4 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 93.24 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 92.55 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.7 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 86.48 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 86.47 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 80.72 |
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=7.1e-24 Score=213.62 Aligned_cols=339 Identities=19% Similarity=0.265 Sum_probs=218.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeec-CCCcccc-
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYY-GTAPRVI- 222 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~-~~~~~~~- 222 (536)
|||+|+++|+| ||..++++|+++|+++ ||+|.+++.... .... ...+.+..+..... .......
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~---G~eV~~i~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 66 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQ---GWQVRWLGTADR--------MEAD--LVPKHGIEIDFIRISGLRGKGIK 66 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTT---TCEEEEEECTTS--------THHH--HGGGGTCEEEECCCCCCTTCCHH
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhC---CCEEEEEEeCCc--------chhh--cccccCCcEEEEECCCcCCCCHH
Confidence 69999999884 9999999999999998 889866542211 0000 01111100000000 0000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEEc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYCP 301 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~~ 301 (536)
.................+++++++||++++++......+...++..+ +|.+.+.++... ...++....++.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~----ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (351)
T d1f0ka_ 67 ALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLG----IPVVLHEQNGIAGLTNKWLAKIATKVMQA 142 (351)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTT----CCEEEEECSSSCCHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcc----cceeecccccccchhHHHhhhhcceeecc
Confidence 00111122233445677789999999999988765544444444443 898877766532 1223445555665543
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
... .......++++....+...... +.+.....+...++++||+.|.....+.+......+.
T Consensus 143 ~~~----------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~---- 204 (351)
T d1f0ka_ 143 FPG----------AFPNAEVVGNPVRTDVLALPLP----QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG---- 204 (351)
T ss_dssp STT----------SSSSCEECCCCCCHHHHTSCCH----HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG----
T ss_pred ccc----------cccceeEEcCCcccccccchhH----HhhhhcccCCcccccccccchhhhhHHHHHHhhhhhc----
Confidence 211 1233456666665544333221 2233445566678888998887666666665555543
Q ss_pred CCCCcEEEEEecCCHHH-HHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC--cc
Q 036427 382 GEPIGQVLVICGRNKKL-ANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA--GQ 458 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~~l-~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~--~~ 458 (536)
.....+++++..... ...........++.+.+|.+++.++|+.||++|+++|++|+.|++++|+|+|++|... ++
T Consensus 205 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~ 282 (351)
T d1f0ka_ 205 --DSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQ 282 (351)
T ss_dssp --GGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCH
T ss_pred --ccceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHHHhCchhhccccchHHHHHHHhCCceeeeecccCCch
Confidence 112334444443311 1222222345678999999999999999999999999999999999999999998642 56
Q ss_pred ccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 459 EAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
|..||..+.+.|.|..++ +++.+.++|..+ +++.+.+|++++++....+++++|++.|+++.+
T Consensus 283 Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l---~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 283 QYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVAR 349 (351)
T ss_dssp HHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh---CHHHHHHHHHHHHccCCccHHHHHHHHHHHHHh
Confidence 777999999999998885 577888887765 577889999999999999999999999999875
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=4e-24 Score=215.40 Aligned_cols=333 Identities=15% Similarity=0.184 Sum_probs=222.6
Q ss_pred EEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 147 VLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 147 IL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
|+|++. .. ||.++.+..||++|.++ ||+|.|.+..... ..+ ..... ... +.. ..
T Consensus 2 i~f~~~~y~p~-GG~e~~~~~la~~L~~~---G~~V~v~~~~~~~-~~~-~~~~~-----~~~-~~~--------~~--- 58 (370)
T d2iw1a1 2 VAFCLYKYFPF-GGLQRDFMRIASTVAAR---GHHVRVYTQSWEG-DCP-KAFEL-----IQV-PVK--------SH--- 58 (370)
T ss_dssp EEEECSEECTT-CHHHHHHHHHHHHHHHT---TCCEEEEESEECS-CCC-TTCEE-----EEC-CCC--------CS---
T ss_pred EEEEecCCCCC-CCHHHHHHHHHHHHHHC---CCEEEEEecCCCC-CCC-CceEE-----EEc-Ccc--------cc---
Confidence 667763 45 79999999999999999 7788765432111 000 00000 000 000 00
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc----------chHHHHHHHHcCCCCCceEEEEecCCCCccc-----
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM----------QHVPLRILRAKGLLKKIVFTTVITDLSTCHP----- 288 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~----------~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~----- 288 (536)
........+...+.+.++..+||+|+.+.... ... .......+ .. ......+.
T Consensus 59 --~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~-----~~~~~~~~~~~~~ 126 (370)
T d2iw1a1 59 --TNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYA-EKVAQEKG----FL-----YRLTSRYRHYAAF 126 (370)
T ss_dssp --SHHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHH-HHHHHHCC----HH-----HHTSHHHHHHHHH
T ss_pred --ccchhhHHHHHHHHHHHHhcccceeeecccCchHHHHHHhhcccc-eeeeeecC----cc-----ccccchhchhHHH
Confidence 00111222345666778899999999765321 011 11111111 00 00000000
Q ss_pred ---ccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCC---CCchHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 289 ---TWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKP---VRPKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 289 ---~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~---~~~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
.+.....+.+++.++...+.+.+ .+.++.++.+++|+++++.+.+ ...++..++.++++++.++++++|+...
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~ 206 (370)
T d2iw1a1 127 ERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFG 206 (370)
T ss_dssp HHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred HHHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEecccc
Confidence 01123567888888888877665 5788899999999998765432 2335677889999999999999999888
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G- 435 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G- 435 (536)
.|+...+++++.....+ .++..+++++|.+. ++.+..++.+...++++.|+.+++.++|+.||++|+|| |
T Consensus 207 ~Kg~~~li~a~~~l~~~----~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~ 282 (370)
T d2iw1a1 207 RKGVDRSIEALASLPES----LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAA 282 (370)
T ss_dssp TTTHHHHHHHHHTSCHH----HHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSS
T ss_pred ccchhhhcccccccccc----cccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88888888877543321 23445555555432 45566677777889999999999999999999999998 4
Q ss_pred hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-C--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchH
Q 036427 436 PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-K--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAV 512 (536)
Q Consensus 436 ~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~ 512 (536)
|++++|||+||+|||+++.++..| .+.+.++|.++ + |+++|+++|.++++ |++++++|+++|+++++.+.+
T Consensus 283 ~~~~~EAma~G~PvI~s~~~g~~e-----~i~~~~~G~l~~~~~d~~~la~~i~~ll~-d~~~~~~~~~~ar~~~~~~~~ 356 (370)
T d2iw1a1 283 GIVLLEAITAGLPVLTTAVCGYAH-----YIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQDL 356 (370)
T ss_dssp CHHHHHHHHHTCCEEEETTSTTTH-----HHHHHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCC
T ss_pred cceeeecccCCeeEEEeCCCChHH-----HhcCCCceEEEcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCh
Confidence 899999999999999999766444 25566677654 2 89999999999999 999999999999998866555
Q ss_pred HHHHHHHHHHHh
Q 036427 513 FRIVQDLHELVR 524 (536)
Q Consensus 513 ~~i~~~i~~l~~ 524 (536)
..+.+.+.++++
T Consensus 357 ~~~~~~~~~ii~ 368 (370)
T d2iw1a1 357 YSLPEKAADIIT 368 (370)
T ss_dssp SCHHHHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 555666666654
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=2.9e-24 Score=222.89 Aligned_cols=267 Identities=16% Similarity=0.059 Sum_probs=186.6
Q ss_pred hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-c---------------------ccccccCCEEEEcC
Q 036427 245 YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-P---------------------TWFHKLVTRCYCPT 302 (536)
Q Consensus 245 ~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-~---------------------~~~~~~~d~vi~~S 302 (536)
..||+||++......++..+.+..+ +|++...|+..... + ......+|.+++.+
T Consensus 119 ~~pDiIh~~~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~ 194 (437)
T d2bisa1 119 PLPDVVHFHDWHTVFAGALIKKYFK----IPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS 194 (437)
T ss_dssp CCCSEEEEETGGGHHHHHHHHHHHC----CCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESC
T ss_pred CCCCEEEECChhhhhHhhhhhcccc----CceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccc
Confidence 3589999987654333334444444 88887777654211 0 11234678899999
Q ss_pred HHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC-------chHHHHHHcCCCCCCCEEEEecCCCC-CCcHHHHHHHHH
Q 036427 303 ADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR-------PKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALG 373 (536)
Q Consensus 303 ~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~-------~~~~~r~~lgi~~~~~~il~~gg~~g-~k~~~~~l~al~ 373 (536)
......... +..+..++.+++|+++.+.+.+.. .+..+++++++.+ .+.++++|+... .++...+++++.
T Consensus 195 ~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~~Kg~~~ll~a~~ 273 (437)
T d2bisa1 195 RGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIE 273 (437)
T ss_dssp HHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHH
T ss_pred hhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhccC-CceEEEeecccccchhHHHHHhhhc
Confidence 887765444 355678899999999988765421 1235667777755 467788887543 466776666665
Q ss_pred HHhhhcccCCCCcEEEEEecCCH-HHHHHHHc--CCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHH
Q 036427 374 NALYDENLGEPIGQVLVICGRNK-KLANKLLS--TDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMI 444 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~--~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma 444 (536)
..... ...+++++ +++|.++ ...+.++. ......+.+.|+. +++..+++.||+++.+| | |++++|||+
T Consensus 274 ~~~~~--~~~~~~~l-vi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama 350 (437)
T d2bisa1 274 ILSSK--KEFQEMRF-IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC 350 (437)
T ss_dssp HHTTS--GGGGGEEE-EEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHT
T ss_pred ccccc--ccccccee-eeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHH
Confidence 44321 11356665 4557664 22222221 1334556677766 47999999999999997 3 899999999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
||+|||+++.++. .++++++.|.+++ |+++|+++|.++++.+++.+++|++++++.++.++|++++++++++
T Consensus 351 ~G~Pvi~~~~g~~------~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~i 424 (437)
T d2bisa1 351 LGAIPIASAVGGL------RDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKA 424 (437)
T ss_dssp TTCEEEEESCTTH------HHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCc------HHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999986543 3366667787775 8999999999988647788999999999998889999999999998
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
.++
T Consensus 425 Y~~ 427 (437)
T d2bisa1 425 YTG 427 (437)
T ss_dssp HHT
T ss_pred HHH
Confidence 875
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.90 E-value=5.9e-22 Score=209.35 Aligned_cols=272 Identities=14% Similarity=0.077 Sum_probs=180.9
Q ss_pred HHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--c----------------------------ccc
Q 036427 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH--P----------------------------TWF 291 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--~----------------------------~~~ 291 (536)
+..++|||||++.......+. ..+.... ..+|++...|+..... + +..
T Consensus 126 ~~~~~pDIvH~h~~~~~l~~~-~~~~~~~-~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (477)
T d1rzua_ 126 LPGWRPDMVHAHDWQAAMTPV-YMRYAET-PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGG 203 (477)
T ss_dssp SSSCCCSEEEEEHHHHTTHHH-HHHHSSS-CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHH
T ss_pred ccCCCCCEEEecchhHHHHHH-HHHHhhC-CCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHH
Confidence 345789999998643332222 3333332 3489987777542100 0 001
Q ss_pred cccCCEEEEcCHHHHHHHHH--hC--------CCCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMK--AG--------LQASQIKVYGLPVRPSFVKPVRP------------------KVELRRE 343 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~--~g--------~~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~ 343 (536)
...+|.+.+++...++.... .+ ....++.+++|+++.+.+.+... ...++..
T Consensus 204 ~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 283 (477)
T d1rzua_ 204 LQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (477)
T ss_dssp HHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred HHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHh
Confidence 24588999999887765421 11 12357899999998776644211 2245566
Q ss_pred cCCCC-CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHH--cCCCCCCEEEecChh-
Q 036427 344 LGMDE-DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLL--STDWKIPVQVKGFVS- 418 (536)
Q Consensus 344 lgi~~-~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~--~~~~~~~V~~~G~v~- 418 (536)
.++++ +.++++++|+....|+++.+++++.+.+. .+.++ +++|.++ .....+. +.....++.+.+..+
T Consensus 284 ~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~------~~~~l-~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 356 (477)
T d1rzua_ 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS------LGGRL-VVLGAGDVALEGALLAAASRHHGRVGVAIGYNE 356 (477)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH------TTCEE-EEEECBCHHHHHHHHHHHHHTTTTEEEEESCCH
T ss_pred cccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh------hCCeE-EEEecCCchHHHHHHHHHhhcCCeEEEEcccCh
Confidence 77754 45688899998888998887777766553 34555 3445554 2212111 223457898887763
Q ss_pred -hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCcccc---CChhhHh-hCCceeecC--CHHHHHHHHHH
Q 036427 419 -KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEA---GNVPYVV-ENGCGKFSK--SPKEIANMVSQ 487 (536)
Q Consensus 419 -~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~---~na~~lv-~~g~g~~~~--d~~~La~~I~~ 487 (536)
....+|+.||++|+|| + |.+++|||+||+|||+++.++..|. +....+. ..+.|.++. |+++|+++|.+
T Consensus 357 ~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~ 436 (477)
T d1rzua_ 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRR 436 (477)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHH
T ss_pred hHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHH
Confidence 5677899999999999 3 8999999999999999997654441 1122222 223566664 99999999986
Q ss_pred Hh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 488 WF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 488 ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ + |++.+++|+++|. .+.++|+++++.++++.++
T Consensus 437 ~l~~~~-~~~~~~~~~~~a~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 437 TVRYYH-DPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHHT-CHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHhhhC-CHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHH
Confidence 55 5 8999999998885 4679999999999998775
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.80 E-value=7.4e-19 Score=178.51 Aligned_cols=163 Identities=19% Similarity=0.162 Sum_probs=119.9
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe
Q 036427 350 LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 350 ~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv 429 (536)
.+.+++..++.......+....+.+.+.. .+.+.++..+... ........++.+.+|++ ..++|..+|+
T Consensus 221 ~~~v~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~-----~~~~~~~~~v~i~~~~p-~~~ll~~a~~ 289 (391)
T d1pn3a_ 221 STPVYVGFGSSSRPATADAAKMAIKAVRA-----SGRRIVLSRGWAD-----LVLPDDGADCFVVGEVN-LQELFGRVAA 289 (391)
T ss_dssp SCCEEEECTTCCSTHHHHHHHHHHHHHHH-----TTCCEEEECTTTT-----CCCSSCCTTCCEESSCC-HHHHHTTSSC
T ss_pred CCeEEEeccccccccHHHHHHHHHHHHHh-----cCCEEEEeccccc-----cccccCCCCEEEecccC-HHHHHhhccE
Confidence 34555666655555555556666555542 3344444444322 11223467899999995 5789999999
Q ss_pred EEECCChHHHHHHHHhCCcEEEeccCCc---cccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 430 IITKAGPGTIAEAMIRGLPIILNDFIAG---QEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 430 ~V~~sG~~tllEAma~GlPVI~~~~~~~---~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
+|+++|.+|++|||++|+|+|+.|...+ +|..|++.+.+.|+|..++ ++++|+++|+++++ + +.+++..+.
T Consensus 290 ~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~-~-~~r~~a~~~ 367 (391)
T d1pn3a_ 290 AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALA-P-EIRARATTV 367 (391)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTS-T-THHHHHHHH
T ss_pred EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC-H-HHHHHHHHH
Confidence 9999999999999999999999998654 3566999999999998874 68999999999997 4 466665555
Q ss_pred HHHhcCCchHHHHHHHHHHHHhhc
Q 036427 503 ALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 503 a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.+ .++++..+.++.|++.+.++
T Consensus 368 a~~-~~~~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 368 ADT-IRADGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp GGG-SCSCHHHHHHHHHHHHHHHH
T ss_pred HHH-HHhcCHHHHHHHHHHHHHhc
Confidence 444 35689999999999998764
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.80 E-value=1.8e-18 Score=176.30 Aligned_cols=162 Identities=14% Similarity=0.077 Sum_probs=121.0
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.+.+.+++..|+............+.+.+.. .+..++++.+.... ......+|+.+.+|++ ..++|..+
T Consensus 235 ~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~p-~~~ll~~~ 303 (401)
T d1rrva_ 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRA-----QGRRVILSRGWTEL-----VLPDDRDDCFAIDEVN-FQALFRRV 303 (401)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHH-----TTCCEEEECTTTTC-----CCSCCCTTEEEESSCC-HHHHGGGS
T ss_pred cCCCeEEEECCccccCCHHHHHHHHHHHHhh-----cCCeEEEecccccc-----ccccCCCCEEEEeccC-cHHHhhhc
Confidence 3445677777766655555566666665542 22334555554321 1224567999999996 57889999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|+.||+++|+|+|++|...+|.. |+..+++.|+|..++ ++++|.++|+++++ ++.+++..+.+
T Consensus 304 ~~~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~-na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~--~~~r~~a~~~~ 380 (401)
T d1rrva_ 304 AAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPY-FAGRVAALGIGVAHDGPTPTFESLSAALTTVLA--PETRARAEAVA 380 (401)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSBTHHH-HHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTS--HHHHHHHHHHT
T ss_pred cEEEecCCchHHHHHHHhCCCEEEecccccHHH-HHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHH
Confidence 999999999999999999999999998877654 999999999998875 69999999999996 56666655544
Q ss_pred HHhcCCchHHHHHHHHHHHHh
Q 036427 504 LKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+..+.++..++++.|++.+.
T Consensus 381 -~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 381 -GMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp -TTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHhhcCHHHHHHHHHHHhC
Confidence 44566889999999988764
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.70 E-value=5.4e-15 Score=149.47 Aligned_cols=160 Identities=20% Similarity=0.155 Sum_probs=114.7
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe
Q 036427 350 LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 350 ~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv 429 (536)
.+++++.++..... .+.++.+.+.+.. .+..++++.|.... .......|+++.+|++ ..++|..+|+
T Consensus 238 ~~~i~~~~~~~~~~--~~~~~~~~~al~~-----~~~~~~~~~~~~~~-----~~~~~~~nv~~~~~~p-~~~~l~~~~~ 304 (401)
T d1iira_ 238 PPPVYLGFGSLGAP--ADAVRVAIDAIRA-----HGRRVILSRGWADL-----VLPDDGADCFAIGEVN-HQVLFGRVAA 304 (401)
T ss_dssp SCCEEEECC---CC--HHHHHHHHHHHHH-----TTCCEEECTTCTTC-----CCSSCGGGEEECSSCC-HHHHGGGSSE
T ss_pred CCeEEEccCccccc--hHHHHHHHHHHHH-----cCCeEEEeccCCcc-----ccccCCCCEEEEeccC-HHHHHhhcCE
Confidence 34555555544322 3444555555542 23445555554431 1223456899999996 5789999999
Q ss_pred EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 036427 430 IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALK 505 (536)
Q Consensus 430 ~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~ 505 (536)
+|+++|.+|+.||+++|+|+|+.|...+|.. |+..+++.|.|..++ ++++|+++|+++++ ++.+++..+.+.+
T Consensus 305 ~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~-na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~--~~~~~~a~~~~~~ 381 (401)
T d1iira_ 305 VIHHGGAGTTHVAARAGAPQILLPQMADQPY-YAGRVAELGVGVAHDGPIPTFDSLSAALATALT--PETHARATAVAGT 381 (401)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--HHHHHHHHHHHHH
T ss_pred EEecCCchHHHHHHHhCCCEEEccccccHHH-HHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHH
Confidence 9999999999999999999999998877654 999999999998874 79999999999996 4567766666666
Q ss_pred hcCCchHHHHHHHHHHHHhhc
Q 036427 506 LARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 506 ~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.. .+..+.++.|.+.+.++
T Consensus 382 ~~~-~~~~~aa~~i~~~i~r~ 401 (401)
T d1iira_ 382 IRT-DGAAVAARLLLDAVSRE 401 (401)
T ss_dssp SCS-CHHHHHHHHHHHHHHTC
T ss_pred HHh-cChHHHHHHHHHHHhcC
Confidence 544 55567788888887653
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=7.5e-15 Score=149.35 Aligned_cols=346 Identities=13% Similarity=0.069 Sum_probs=214.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhcccc-ceeecCCCcccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLW-KMTYYGTAPRVI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~-~~~~~~~~~~~~ 222 (536)
|+||+++++.. ...-....|.++|++. + ++++.++....- ....+.. .....+. ..........
T Consensus 2 MkkI~~v~GtR--~e~~kl~pli~~l~~~-~-~~~~~li~tG~H--------~~~~~~~-~~~~~i~~d~~l~~~~~~-- 66 (373)
T d1v4va_ 2 MKRVVLAFGTR--PEATKMAPVYLALRGI-P-GLKPLVLLTGQH--------REQLRQA-LSLFGIQEDRNLDVMQER-- 66 (373)
T ss_dssp CEEEEEEECSH--HHHHHHHHHHHHHHTS-T-TEEEEEEECSSC--------HHHHHHH-HHTTTCCCSEECCCCSSC--
T ss_pred CCeEEEEEEhh--HHHHHHHHHHHHHHhC-C-CCCEEEEEccCC--------hhhhhCc-chhcCCCccccCCCCCCC--
Confidence 67999988764 6666777788999875 2 577655433211 0000100 1110000 0000000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHH-HHHHcCCCCCceEEEEecCCC----------Ccccccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLR-ILRAKGLLKKIVFTTVITDLS----------TCHPTWF 291 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~-~~~~~g~~~~ip~v~~~~d~~----------~~~~~~~ 291 (536)
... ..........+.+++.+.+||+|++.+.....++.. ++...+ +|++.+..... ...+..+
T Consensus 67 -~s~-~~~~~~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~----ipi~HiegG~rsg~~~~~~~de~~R~~i 140 (373)
T d1v4va_ 67 -QAL-PDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEG----IPVGHVEAGLRSGNLKEPFPEEANRRLT 140 (373)
T ss_dssp -CCH-HHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTT----CCEEEETCCCCCSCTTSSTTHHHHHHHH
T ss_pred -CCH-HHHHHHHHHHHhhhhhhcCcccccccccCccchhHHHHHHHhh----hhheeecccccccccccCcchhhhhhhh
Confidence 011 112233456788899999999999999766554433 334443 99887754211 1233557
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATAR 370 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~ 370 (536)
.+.++..+|.++..++.+.+.|.++.+|.++|+|.-+.... .....+........++++++...... ........
T Consensus 141 skls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~----~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~ 216 (373)
T d1v4va_ 141 DVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLL----AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQ 216 (373)
T ss_dssp HHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHH----HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHH
T ss_pred ccccceeeecchhhhhhhhhhcccccceeecccchhhHHHh----hhhhcccccccccccceeEEeccccccchHHHHHH
Confidence 78999999999999999999999999999999985433210 00000011122334566665544332 22233222
Q ss_pred HHHHHhhhcccCCCCcEEEEEecCCHHHHHHH-HcCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHHhCC
Q 036427 371 ALGNALYDENLGEPIGQVLVICGRNKKLANKL-LSTDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMIRGL 447 (536)
Q Consensus 371 al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l-~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma~Gl 447 (536)
+...+.+ ...+..+++............ +......++.++...+ ++-.++..|+++|..||+ .+.||.++|+
T Consensus 217 -~~~~~~~---~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSss-gi~Ea~~lg~ 291 (373)
T d1v4va_ 217 -ALKRVAE---AFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGG-LQEEGAALGV 291 (373)
T ss_dssp -HHHHHHH---HCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHH-HHHHHHHTTC
T ss_pred -HHHHHhh---hcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEecccch-hhhcchhhcC
Confidence 2233322 134455555555554332222 2223445888887763 778889999999998874 4679999999
Q ss_pred cEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 448 PIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+|.+...+.++. -++.|...++. |++++.+++..+++ +++.++++.....-+...+++++|++.|.+.+..
T Consensus 292 P~Inir~~~eRqe-----g~~~g~nvlv~~d~~~I~~~i~~~l~-~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~ 364 (373)
T d1v4va_ 292 PVVVLRNVTERPE-----GLKAGILKLAGTDPEGVYRVVKGLLE-NPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGL 364 (373)
T ss_dssp CEEECSSSCSCHH-----HHHHTSEEECCSCHHHHHHHHHHHHT-CHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTS
T ss_pred cEEEeCCCccCHH-----HHhcCeeEEcCCCHHHHHHHHHHHHc-CHHHHhhcccCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999865554443 34567776664 89999999999999 9998888877666677889999999999988754
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.64 E-value=1e-15 Score=141.42 Aligned_cols=163 Identities=20% Similarity=0.201 Sum_probs=117.1
Q ss_pred hHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCCCCEE
Q 036427 337 KVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWKIPVQ 412 (536)
Q Consensus 337 ~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~~~V~ 412 (536)
+..++++++++ +.+.++++|+.. ..|++..+++++...... ...+++++ +++|.++ +.....+.. .....+.
T Consensus 20 ~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~--~~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~~~ 95 (196)
T d2bfwa1 20 KKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSK--KEFQEMRF-IIIGKGDPELEGWARSLEEKHGNVKV 95 (196)
T ss_dssp HHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTS--GGGGGEEE-EEECCBCHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhcc--cCCCCeEE-EEEeecccchhhhhhhhhhccceeEE
Confidence 34678899995 566788888764 467888777777654321 11355655 4557653 222222221 2344566
Q ss_pred EecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHH
Q 036427 413 VKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANM 484 (536)
Q Consensus 413 ~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~ 484 (536)
+.|++ +++..+|+.||++|+|+ | |.+++|||+||+|||+++.++ ...+++++.|++++ |+++++++
T Consensus 96 ~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~------~~e~i~~~~g~~~~~~~~~~l~~~ 169 (196)
T d2bfwa1 96 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG------LRDIITNETGILVKAGDPGELANA 169 (196)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH------HHHHCCTTTCEEECTTCHHHHHHH
T ss_pred eeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc------cceeecCCceeeECCCCHHHHHHH
Confidence 77776 48999999999999997 4 899999999999999998543 33466677787775 89999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 485 VSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 485 I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
|.++++.+++.+++|+++|++++.+
T Consensus 170 i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 170 ILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9998865788999999999987654
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.62 E-value=1.7e-14 Score=146.96 Aligned_cols=349 Identities=16% Similarity=0.101 Sum_probs=207.7
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
++|||+++++. ....-....|.++|++. + +.++.++....- . .....+.......+-+..........
T Consensus 1 ~k~Ki~~v~Gt--R~e~~kl~pli~~l~~~-~-~~~~~li~tG~H-----~-~~~~~~~~~~~i~~~~~~~~~~~~~~-- 68 (377)
T d1o6ca_ 1 KKLKVMTVFGT--RPEAIKMAPLVLELKKY-P-EIDSYVTVTAQH-----R-QMLDQVLDAFHIKPDFDLNIMKERQT-- 68 (377)
T ss_dssp CCEEEEEEECS--HHHHHHHHHHHHHGGGC-T-TEEEEEEECCSC-----G-GGTHHHHHHTTCCCSEECCCCCTTCC--
T ss_pred CCceEEEEEEc--hHhHHHHHHHHHHHHhC-C-CCCEEEEEeCCC-----H-HHHHHHHhhcCCCCceeeecCCCCCC--
Confidence 46899999955 46677777888999875 2 466655433211 0 11111111111111111111110000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC----------cccccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST----------CHPTWF 291 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~----------~~~~~~ 291 (536)
...........+.+.+++.+||+|++++.....++ ..++...+ ||++.+.....+ ..+..+
T Consensus 69 ----~~~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~----Ipi~HiegG~~s~~~~~~~~de~~R~~i 140 (377)
T d1o6ca_ 69 ----LAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQ----IAVGHVEAGLRTGNKYSPFPEELNRQMT 140 (377)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTT----CEEEEESCCCCCSCTTTTTTHHHHHHHH
T ss_pred ----HHHHHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhcc----ceEEEEecccccccccccCchhhhcccc
Confidence 11122334567788999999999999997655443 34455554 999877653221 123456
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC--CCCchHHHHHHcCCCCCCCEEEEecCCCC-C-CcHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK--PVRPKVELRRELGMDEDLPAVLLMGGGEG-M-GPIEA 367 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~--~~~~~~~~r~~lgi~~~~~~il~~gg~~g-~-k~~~~ 367 (536)
.+.++.++|+++..++.+.+.|.++.+|.++|+|.-+.... ...... ..+......+.++++.-... . .....
T Consensus 141 skls~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~~---~~~~~~~~~~~ilvt~Hr~~~~~~~~~~ 217 (377)
T d1o6ca_ 141 GAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSH---PVLDQVGEDKMILLTAHRRENLGEPMEN 217 (377)
T ss_dssp HHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCC---STTTTTTTSEEEEECC----------HH
T ss_pred ccceeEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHhh---hhhhhccCCceEEEEeccccccccchHH
Confidence 78999999999999999999999999999999985442210 000000 01111223455555544322 1 22233
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHH-cCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHH
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNKKLANKLL-STDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMI 444 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~-~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma 444 (536)
.+..+...+.. .....+++...........+. .....++++++...+ ++-.+|..|+++|+-||++ +.||..
T Consensus 218 ~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~-i~Ea~~ 292 (377)
T d1o6ca_ 218 MFKAIRRIVGE----FEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-QEEAPS 292 (377)
T ss_dssp HHHHHHHHHHH----CTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CH-HHHGGG
T ss_pred HHHHHHhhccc----ccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeecccchh-HHhhhh
Confidence 44444444331 233433333332333333333 334556899988874 7888999999999999855 679999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
+|+|+|.....+.++. -++.|...++. +.+++.+++..++. ++..++.+...-.-+....++++|++.|...+
T Consensus 293 lg~P~Inir~~tERqe-----~~~~g~nilv~~~~~~I~~~i~~~l~-~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 293 LGKPVLVLRDTTERPE-----GVEAGTLKLAGTDEENIYQLAKQLLT-DPDEYKKMSQASNPYGDGEASRRIVEELLFHY 366 (377)
T ss_dssp GTCCEEEECSCCC--------CTTTTSSEEECSCHHHHHHHHHHHHH-CHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHT
T ss_pred hhceEEEeCCCCcCcc-----hhhcCeeEECCCCHHHHHHHHHHHHh-ChHHHhhhccCCCCCCCChHHHHHHHHHHHhh
Confidence 9999999876554443 34567777665 89999999999999 88888777665555777789999999998766
Q ss_pred hh
Q 036427 524 RQ 525 (536)
Q Consensus 524 ~~ 525 (536)
.-
T Consensus 367 ~~ 368 (377)
T d1o6ca_ 367 GY 368 (377)
T ss_dssp TS
T ss_pred Cc
Confidence 53
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.56 E-value=2.6e-13 Score=137.84 Aligned_cols=346 Identities=16% Similarity=0.132 Sum_probs=206.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++. ....-....|.++|++. + +.++.++....- . .............+-...........
T Consensus 1 MKi~~v~Gt--R~e~~kl~pli~~l~~~-~-~~~~~li~tG~H-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~---- 66 (376)
T d1f6da_ 1 MKVLTVFGT--RPEAIKMAPLVHALAKD-P-FFEAKVCVTAQH-----R-EMLDQVLKLFSIVPDYDLNIMQPGQG---- 66 (376)
T ss_dssp CEEEEEECS--HHHHHHHHHHHHHHHHC-T-TCEEEEEECCTT-----G-GGGHHHHHHTTCCCSEECCCCSSSSC----
T ss_pred CeEEEEEEh--hHhHHHHHHHHHHHHhC-C-CCCEEEEEcCCC-----H-HHHHHHHHhcCCCCCcccccCCCCCC----
Confidence 799999944 47777788899999876 2 466655433211 0 11111111111111111100000000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHH-HHHcCCCCCceEEEEecCCC----------Ccccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRI-LRAKGLLKKIVFTTVITDLS----------TCHPTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~-~~~~g~~~~ip~v~~~~d~~----------~~~~~~~~~ 293 (536)
...........+.+.+.+.+||+|++.+.....++..+ +... +||++.+..... ...+..+.+
T Consensus 67 --~~~~~~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~----~ipi~HiegG~~s~~~~~~~pde~~R~~isk 140 (376)
T d1f6da_ 67 --LTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQ----RIPVGHVEAGLRTGDLYSPWPEEANRTLTGH 140 (376)
T ss_dssp --HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTT----TCCEEEESCCCCCSCTTSSTTHHHHHHHHHH
T ss_pred --HHHHHHHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhh----CceEEEEecccccccccccCchhhhhhhhcc
Confidence 11112233457778899999999999997765544333 3333 399887765221 123355678
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC---CCCchH-----HHHHHcCCCCCCCEEEEecCCCCC-Cc
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK---PVRPKV-----ELRRELGMDEDLPAVLLMGGGEGM-GP 364 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~---~~~~~~-----~~r~~lgi~~~~~~il~~gg~~g~-k~ 364 (536)
.++..+|.++..++.+.+.|..+.+|+++|+|.-+.+.. ...... .......++.+.++++++.-.... ..
T Consensus 141 ls~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~ 220 (376)
T d1f6da_ 141 LAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (376)
T ss_dssp TCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCH
T ss_pred ceeEEEeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhh
Confidence 999999999999999999999999999999986432110 000011 111122344556777776554332 21
Q ss_pred -HHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHH
Q 036427 365 -IEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 365 -~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tll 440 (536)
...+...+..... ...+..+++-............+ .....++.+++..+ ++-.++..|+++|.-||++ +.
T Consensus 221 ~~~~i~~~l~~~~~----~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssg-i~ 295 (376)
T d1f6da_ 221 GFEEICHALADIAT----THQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGI-QE 295 (376)
T ss_dssp HHHHHHHHHHHHHH----HCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGG-GG
T ss_pred hHHHHHHHHhhhhh----hcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecCcch-Hh
Confidence 2233333332221 13444444444444433222222 23456888877763 6778999999999998744 57
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
||..+|+|+|.......++. -++.|....+. +.+++.+++.++++ ++..++.+...-.-+...+++++|++.|
T Consensus 296 Ea~~lg~P~Inir~~ter~~-----~~~~g~~i~v~~~~~~I~~ai~~~l~-~~~~~~~~~~~~npYGdG~as~rI~~iL 369 (376)
T d1f6da_ 296 EAPSLGKPVLVMRDTTERPE-----AVTAGTVRLVGTDKQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEAL 369 (376)
T ss_dssp TGGGGTCCEEECSSCCSCHH-----HHHHTSEEECCSSHHHHHHHHHHHHH-CHHHHHHHHHSCCTTCCSCHHHHHHHHH
T ss_pred hHHHhCCCEEEcCCCccCcc-----ceecCeeEECCCCHHHHHHHHHHHHh-ChHhhhhhccCCCCCCCChHHHHHHHHH
Confidence 99999999998754333332 44567666664 89999999999998 7776665555444466778889888877
Q ss_pred HH
Q 036427 520 HE 521 (536)
Q Consensus 520 ~~ 521 (536)
++
T Consensus 370 k~ 371 (376)
T d1f6da_ 370 KN 371 (376)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=2.4e-12 Score=133.97 Aligned_cols=268 Identities=12% Similarity=0.068 Sum_probs=172.5
Q ss_pred hhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc------c--cc---ccccCCEEEEcCHHHHHHHHH
Q 036427 244 KYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH------P--TW---FHKLVTRCYCPTADVAKRAMK 311 (536)
Q Consensus 244 ~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------~--~~---~~~~~d~vi~~S~~~~~~l~~ 311 (536)
..+| |+|+++.+.+..+|..+ ++.+ ++.+...++|...... + .. ..-.+|.+...+....+.+..
T Consensus 119 ~~~~~d~iwvhDyhl~llp~~l-R~~~--~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~ 195 (456)
T d1uqta_ 119 LLQDDDIIWIHDYHLLPFAHEL-RKRG--VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLD 195 (456)
T ss_dssp GCCTTCEEEEESGGGTTHHHHH-HHTT--CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHH
T ss_pred hccCCCeEEEeccchhhhHHHH-HHhC--CCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHH
Confidence 3455 78888876665555543 4433 2356655555332111 1 00 123568888888777766553
Q ss_pred h-----CCC------------CCCEEEeCCCCCCCCCCC----CC--chHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 312 A-----GLQ------------ASQIKVYGLPVRPSFVKP----VR--PKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 312 ~-----g~~------------~~ki~vignpv~~~~~~~----~~--~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
. +.. ..++.++++++|+..+.. .. ...+++.++ .++++|+.+++....|++...
T Consensus 196 ~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~~~il~V~Rld~~KGi~~~ 272 (456)
T d1uqta_ 196 CLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL---KNVQNIFSVERLDYSKGLPER 272 (456)
T ss_dssp HHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT---TTCEEEEEECCBCGGGCHHHH
T ss_pred HHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc---CCCeEEEEeCCCchhhchHHH
Confidence 1 110 124667788888754421 11 112334443 467889999998888999988
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCC----H---HHHHHHH-----------cCCCCCCEEEecCh--hhHHHHHhhcC
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRN----K---KLANKLL-----------STDWKIPVQVKGFV--SKMEEAMGACD 428 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~----~---~l~~~l~-----------~~~~~~~V~~~G~v--~~l~~ll~~aD 428 (536)
++++.+.+++-......+.++.+++.. . ++..++. ..++.+.+.+.+.. +++..+|+.||
T Consensus 273 l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Ad 352 (456)
T d1uqta_ 273 FLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSD 352 (456)
T ss_dssp HHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhc
Confidence 888877665311111123333332221 1 1111111 22456667777766 58999999999
Q ss_pred eEEECC---C-hHHHHHHHHhCCc-----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHH
Q 036427 429 CIITKA---G-PGTIAEAMIRGLP-----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELK 497 (536)
Q Consensus 429 v~V~~s---G-~~tllEAma~GlP-----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~ 497 (536)
+++.+| | +++++|||+||+| +|+++..+..+. + +.|.+++ |+++++++|.++|+++++.++
T Consensus 353 v~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~------l--~~g~lVnP~d~~~~A~ai~~aL~~~~~er~ 424 (456)
T d1uqta_ 353 VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE------L--TSALIVNPYDRDEVAAALDRALTMSLAERI 424 (456)
T ss_dssp EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT------C--TTSEEECTTCHHHHHHHHHHHHTCCHHHHH
T ss_pred eeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHH------h--CCeEEECcCCHHHHHHHHHHHHcCCHHHHH
Confidence 999998 5 8999999999999 888886554332 2 2356665 999999999999987788999
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 498 AMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 498 ~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++.+++++....+.+...++..++.+++
T Consensus 425 ~~~~~~~~~v~~~~~~~W~~~fl~~l~~ 452 (456)
T d1uqta_ 425 SRHAEMLDVIVKNDINHWQECFISDLKQ 452 (456)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999999999888888888887776654
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.43 E-value=3.7e-13 Score=120.54 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=100.0
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---H---HHHHHHHcCCCCCCEEEecCh--hhHH
Q 036427 350 LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---K---KLANKLLSTDWKIPVQVKGFV--SKME 421 (536)
Q Consensus 350 ~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---~---~l~~~l~~~~~~~~V~~~G~v--~~l~ 421 (536)
...++++|+....|++..+++++.+ + ++.+++++ |.+ + .+.+.+++. ..++|+|+|++ +++.
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~-l-------~~~~l~iv-g~~~~~~~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~ 81 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKK-L-------QDEKLYIV-GWFSKGDHAERYARKIMKI-APDNVKFLGSVSEEELI 81 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHH-C-------TTSCEEEE-BCCCTTSTHHHHHHHHHHH-SCTTEEEEESCCHHHHH
T ss_pred CCEEEEEecCccccCHHHHHHHHHH-h-------cCCeEEEE-Eecccccchhhhhhhhccc-ccCcEEEeecccccccc
Confidence 3567789998888888777776643 2 34555444 432 2 233344433 34689999998 4799
Q ss_pred HHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHH-H
Q 036427 422 EAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKID-E 495 (536)
Q Consensus 422 ~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~-~ 495 (536)
++|+.||++|+|| | |.+++|||++|+|+|+++.++..+ .+.+...|.+++ |+++++++|..+++ +++ .
T Consensus 82 ~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e-----~i~~~~~g~~~~~d~~~~~~~i~~l~~-~~~~~ 155 (166)
T d2f9fa1 82 DLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKE-----TVINEKTGYLVNADVNEIIDAMKKVSK-NPDKF 155 (166)
T ss_dssp HHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHH-----HCCBTTTEEEECSCHHHHHHHHHHHHH-CTTTT
T ss_pred cccccccccccccccccccccccccccccccceeecCCccee-----eecCCcccccCCCCHHHHHHHHHHHHh-CHHHH
Confidence 9999999999998 3 899999999999999998644333 133445566664 89999999999999 765 4
Q ss_pred HHHHHHHHHH
Q 036427 496 LKAMSQNALK 505 (536)
Q Consensus 496 ~~~m~~~a~~ 505 (536)
++.+.++|++
T Consensus 156 ~~~~~~~a~~ 165 (166)
T d2f9fa1 156 KKDCFRRAKE 165 (166)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 5556666654
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.43 E-value=7.3e-12 Score=128.74 Aligned_cols=155 Identities=19% Similarity=0.138 Sum_probs=99.9
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHcCCCCCCEEEecChhhH-H
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLSTDWKIPVQVKGFVSKM-E 421 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~~~~~~~V~~~G~v~~l-~ 421 (536)
.....+++..++.......+.+..+...+.. .+..+++..+... ...+... ...++.+..|.... .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~n~~v~~~~pq~~~ 343 (461)
T d2acva1 272 PDKSVVFLCFGSMGVSFGPSQIREIALGLKH-----SGVRFLWSNSAEKKVFPEGFLEWME---LEGKGMICGWAPQVEV 343 (461)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHH-----HTCEEEEECCCCGGGSCTTHHHHHH---HHCSEEEESSCCHHHH
T ss_pred CccceeeeeccccccCCCHHHHHHHHHHHHh-----cCccEEEEeecccccCCccchhhhc---cCCCeEEEecCCHHHH
Confidence 3344555555544443334555555554431 2345555544332 1111111 23478888877532 2
Q ss_pred HHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh-hCCceeecC----------CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV-ENGCGKFSK----------SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv-~~g~g~~~~----------d~~~La~~I~~ll~ 490 (536)
..+..||++|+++|.+|+.||+++|+|+|+.|...+|.. |+..++ +.|.|..++ +.++++++|.++|+
T Consensus 344 l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~-nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~ 422 (461)
T d2acva1 344 LAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL-NAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD 422 (461)
T ss_dssp HHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH-HHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred HhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHH-HHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHhh
Confidence 345899999999999999999999999999999988876 888875 568887653 68999999999997
Q ss_pred CCHHHHHHHH---HHHHHhcCCch
Q 036427 491 PKIDELKAMS---QNALKLARPDA 511 (536)
Q Consensus 491 ~d~~~~~~m~---~~a~~~a~~~~ 511 (536)
.++.+|++.. +.+++.+++.+
T Consensus 423 ~d~~~r~~a~~l~~~~r~a~~~gg 446 (461)
T d2acva1 423 KDSIVHKKVQEMKEMSRNAVVDGG 446 (461)
T ss_dssp TTCTHHHHHHHHHHHHHHHTSTTS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCC
Confidence 2455665444 44555555543
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=99.42 E-value=4.3e-12 Score=130.63 Aligned_cols=168 Identities=18% Similarity=0.161 Sum_probs=108.5
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH--HH-HHHHcCCCCCCEEEecChhhHHH
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK--LA-NKLLSTDWKIPVQVKGFVSKMEE 422 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~--l~-~~l~~~~~~~~V~~~G~v~~l~~ 422 (536)
-.+..+++++..|+..... .+.+..++..+.+ .+.++++..+.... +. .... ....|+.+..|++.. +
T Consensus 261 ~~~~~~~v~~s~gs~~~~~-~~~~~~~~~~~~~-----~~~~vl~~~~~~~~~~l~~~~~~--~~~~nv~~~~~~pq~-~ 331 (450)
T d2c1xa1 261 ERKPTSVVYISFGTVTTPP-PAEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGFLE--KTRGYGMVVPWAPQA-E 331 (450)
T ss_dssp TSCTTCEEEEECCSSCCCC-HHHHHHHHHHHHH-----HTCCEEEECCGGGGGGSCTTHHH--HHTTTEEEESCCCHH-H
T ss_pred cCCccceeeecccccccCC-HHHHHHHHHHHHh-----cCCeEEEEECCCccccCChhhhh--hccccccccccCChH-h
Confidence 3345567777777654433 3334444444432 23455555443221 10 0000 124589999998754 4
Q ss_pred HH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC----CHHHHHHHHHHHhCCCHHH
Q 036427 423 AM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK----SPKEIANMVSQWFGPKIDE 495 (536)
Q Consensus 423 ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~----d~~~La~~I~~ll~~d~~~ 495 (536)
++ ..++++|+++|.+++.||+.+|+|+|++|...+|.. |+..+++ .|.|..++ +.++|.++|+++|+ |+.+
T Consensus 332 lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~-na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~-d~~y 409 (450)
T d2c1xa1 332 VLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL-NGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILS-QEKG 409 (450)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHH-SHHH
T ss_pred hhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHH-HHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhc-CcHH
Confidence 55 688999999999999999999999999999888875 8888877 59999875 89999999999999 8753
Q ss_pred H---HHHH---HHHHHhcCC-chHHHHHHHHHHHHh
Q 036427 496 L---KAMS---QNALKLARP-DAVFRIVQDLHELVR 524 (536)
Q Consensus 496 ~---~~m~---~~a~~~a~~-~~~~~i~~~i~~l~~ 524 (536)
+ ++++ +.+.+-..+ .++.+-+..|.+.+.
T Consensus 410 ~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~ 445 (450)
T d2c1xa1 410 KKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 445 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh
Confidence 2 3333 333333333 344444555555543
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.31 E-value=3e-10 Score=116.68 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=81.2
Q ss_pred CCCEEEecChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC-------C
Q 036427 408 KIPVQVKGFVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK-------S 477 (536)
Q Consensus 408 ~~~V~~~G~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~-------d 477 (536)
..||.+.+|++. .++| ..++++|+++|.+++.||+.+|+|+|++|..++|.. |+..+++ .|.|+.+. +
T Consensus 333 ~~nv~~~~w~Pq-~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~-nA~rv~e~lG~Gv~l~~~~~~~~t 410 (471)
T d2vcha1 333 KRGFVIPFWAPQ-AQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKM-NAVLLSEDIRAALRPRAGDDGLVR 410 (471)
T ss_dssp TTEEEEESCCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTTCCEECCCCCTTSCCC
T ss_pred CCCeeecccCCH-HHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHH-HHHHHHHHheeEEEEecCCCCcCC
Confidence 468999999976 4677 578999999999999999999999999999998875 8888866 58988662 7
Q ss_pred HHHHHHHHHHHhCCCHH---HHHHHHH---HHHHhcCCch
Q 036427 478 PKEIANMVSQWFGPKID---ELKAMSQ---NALKLARPDA 511 (536)
Q Consensus 478 ~~~La~~I~~ll~~d~~---~~~~m~~---~a~~~a~~~~ 511 (536)
.++|.++|+++++ |++ +|+++++ .+++...+.+
T Consensus 411 ~~~l~~ai~~vl~-~~~~~~~r~ra~~l~e~~~~a~~~gG 449 (471)
T d2vcha1 411 REEVARVVKGLME-GEEGKGVRNKMKELKEAACRVLKDDG 449 (471)
T ss_dssp HHHHHHHHHHHHT-STHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8999999999999 764 6655554 4455445543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=99.29 E-value=1.4e-09 Score=111.37 Aligned_cols=141 Identities=13% Similarity=0.166 Sum_probs=97.4
Q ss_pred cCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH------HHHHHHHcCCCCCCEEEecCh
Q 036427 344 LGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK------KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 344 lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------~l~~~l~~~~~~~~V~~~G~v 417 (536)
+.-.....++++.+++..... .+....++..+.+ ...+++++.+... .+..... .....|+.+..|+
T Consensus 282 ~~~~~~~~~v~~~~gs~~~~~-~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~~ 354 (473)
T d2pq6a1 282 LESKEPGSVVYVNFGSTTVMT-PEQLLEFAWGLAN-----CKKSFLWIIRPDLVIGGSVIFSSEFT-NEIADRGLIASWC 354 (473)
T ss_dssp HTTSCTTCEEEEECCSSSCCC-HHHHHHHHHHHHH-----TTCEEEEECCGGGSTTTGGGSCHHHH-HHHTTTEEEESCC
T ss_pred hhhcCCCceeeeccCcccccc-HHHHHHHHHHHHh-----cCCeEEEEEccCCcccccccCcccch-hhccCceEEeeeC
Confidence 333344556666666655433 2334444444432 2345666654332 1101100 0134589999999
Q ss_pred hhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC---CHHHHHHHHHHHhCC
Q 036427 418 SKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK---SPKEIANMVSQWFGP 491 (536)
Q Consensus 418 ~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~---d~~~La~~I~~ll~~ 491 (536)
+. .++| ..++++|+++|.+|+.||+.+|+|+|++|...+|.. |+..+++ .|.|..++ +.++|.++|+++++
T Consensus 355 Pq-~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~-na~rv~~~~G~G~~l~~~~t~~~l~~ai~~vl~- 431 (473)
T d2pq6a1 355 PQ-DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPT-DCRFICNEWEIGMEIDTNVKREELAKLINEVIA- 431 (473)
T ss_dssp CH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHT-
T ss_pred CH-HHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHH-HHHHHHHHcCeEEeeCCCcCHHHHHHHHHHHHc-
Confidence 75 4566 688999999999999999999999999999988876 8888865 49998876 89999999999999
Q ss_pred CHH
Q 036427 492 KID 494 (536)
Q Consensus 492 d~~ 494 (536)
|+.
T Consensus 432 d~~ 434 (473)
T d2pq6a1 432 GDK 434 (473)
T ss_dssp SHH
T ss_pred CCh
Confidence 875
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=3.7e-06 Score=82.49 Aligned_cols=271 Identities=13% Similarity=0.068 Sum_probs=131.9
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||||++-.+- -|..-.+..+.++|++.+| +.+|.++.... +..+.+..|.....+.......
T Consensus 1 MkILii~~~~-iGD~il~~p~i~~Lk~~~P-~~~I~~l~~~~-------------~~~l~~~~p~id~v~~~~~~~~--- 62 (348)
T d1pswa_ 1 MKILVIGPSW-VGDMMMSQSLYRTLQARYP-QAIIDVMAPAW-------------CRPLLSRMPEVNEAIPMPLGHG--- 62 (348)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHHST-TCEEEEEECGG-------------GHHHHTTCTTEEEEEEC--------
T ss_pred CeEEEEcCCC-hHHHHHHHHHHHHHHHHCC-CCEEEEEEChh-------------HHHHHhhCCCcCEEEEecCccc---
Confidence 8999997653 6999999999999999988 56665543211 1112233232221111110000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCCCcccccccccCCEEEE---
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLSTCHPTWFHKLVTRCYC--- 300 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~~~~~~~~~~~~d~vi~--- 300 (536)
........++.+.+++.++|+++........ ..+....+ ++.. .+..... .++ ......
T Consensus 63 ----~~~~~~~~~l~~~l~~~~~D~~i~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~----~~~---~~~~~~~~~ 125 (348)
T d1pswa_ 63 ----ALEIGERRKLGHSLREKRYDRAYVLPNSFKS--ALVPLFAG----IPHRTGWRGEMR----YGL---LNDVRVLDK 125 (348)
T ss_dssp ------CHHHHHHHHHHTTTTTCSEEEECSCCSGG--GHHHHHTT----CSEEEEECTTTC----TTT---CTEEECCCT
T ss_pred ----cchhhhhhhHHHHhhhcccceEeecccccch--hhHHHhhc----cccccccccccc----ccc---ccccccccc
Confidence 0112223456667888899999987644322 12233333 3332 2222111 010 011110
Q ss_pred -cCHHHHHHHHHhCCC----CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC-CC-Cc-HHHHHHHH
Q 036427 301 -PTADVAKRAMKAGLQ----ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE-GM-GP-IEATARAL 372 (536)
Q Consensus 301 -~S~~~~~~l~~~g~~----~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~-g~-k~-~~~~l~al 372 (536)
......+........ ............+........+......+++..+++.+++..|.. +. +. ..+.+.++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L 205 (348)
T d1pswa_ 126 EAWPLMVERYIALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAEL 205 (348)
T ss_dssp TTCCSHHHHHHHTTSCGGGCSSGGGSCSSCCCCCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHH
T ss_pred ccchhHHHHHHHHHHhhhccccccccccccccccccCCHHHHHHHHHHhccccCCCeEEeccccchhhccccchHHHhhh
Confidence 011112222221111 000000111111111111112334556778888888877666543 22 22 23445566
Q ss_pred HHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCC---CCC-EEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHh
Q 036427 373 GNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDW---KIP-VQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIR 445 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~---~~~-V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~ 445 (536)
++.+.+ .+..++++.|..+ +..+.+.+.-. ..+ +.+.|.. .++..++..||++|+.-+ +.+.-|.++
T Consensus 206 ~~~l~~-----~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt-g~~HlAaa~ 279 (348)
T d1pswa_ 206 AKQLID-----EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-GLMHVAAAL 279 (348)
T ss_dssp HHHHHH-----TTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-HHHHHHHHT
T ss_pred HHHHhh-----cCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHHHhcceeEeecCc-cHHHHHHHc
Confidence 666542 3455545444433 33344433211 123 3444543 589999999999999764 345779999
Q ss_pred CCcEEEeccCC
Q 036427 446 GLPIILNDFIA 456 (536)
Q Consensus 446 GlPVI~~~~~~ 456 (536)
|+|+|+.=.+.
T Consensus 280 g~p~i~lfg~~ 290 (348)
T d1pswa_ 280 NRPLVALYGPS 290 (348)
T ss_dssp TCCEEEEESSS
T ss_pred CCCEEEEECCC
Confidence 99999986443
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=93.24 E-value=0.34 Score=41.17 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=42.4
Q ss_pred hhHHHHHhhcCeEEECC-ChHHHHH---HHHhCCcEEEeccCCccccCChhhHhhCC--------ceeecCCHHHHHHHH
Q 036427 418 SKMEEAMGACDCIITKA-GPGTIAE---AMIRGLPIILNDFIAGQEAGNVPYVVENG--------CGKFSKSPKEIANMV 485 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s-G~~tllE---Ama~GlPVI~~~~~~~~e~~na~~lv~~g--------~g~~~~d~~~La~~I 485 (536)
+....++..||++|.-+ |.+|+-| ++..++|+|+.+..+.-...-...+.+.+ .-.+++|++++.+.|
T Consensus 88 ~Rk~~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~i~~~~~~ee~~~~l 167 (170)
T d1rcua_ 88 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII 167 (170)
T ss_dssp HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred hhHHHHhhcccceeeeccccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHH
Confidence 45667789999877655 5677665 89999999998754321110111111221 112345888888877
Q ss_pred HHH
Q 036427 486 SQW 488 (536)
Q Consensus 486 ~~l 488 (536)
+++
T Consensus 168 ~~l 170 (170)
T d1rcua_ 168 EQI 170 (170)
T ss_dssp HTC
T ss_pred HcC
Confidence 653
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=92.55 E-value=0.64 Score=35.95 Aligned_cols=91 Identities=20% Similarity=0.178 Sum_probs=54.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||.++=+|.| | +++.+++++.+|+..-+++.|.... | +-.....
T Consensus 1 mkIgifDSGiG-G-----LtVl~~l~~~lP~~~~iY~~D~a~~--P--YG~ks~~------------------------- 45 (105)
T d1b74a1 1 MKIGIFDSGVG-G-----LTVLKAIRNRYRKVDIVYLGDTARV--P--YGIRSKD------------------------- 45 (105)
T ss_dssp CEEEEEESSST-H-----HHHHHHHHHHSSSCEEEEEECGGGC--C--GGGSCHH-------------------------
T ss_pred CEEEEEeCCCC-H-----HHHHHHHHHHCCCCCEEEEecCCCC--C--CCCCCHH-------------------------
Confidence 79999999994 4 6667888888887667788875321 1 1111100
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEE
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTT 278 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~ 278 (536)
....+..++.+++.+.++|+|+.-....+...+..++..- .+|++-
T Consensus 46 -----~I~~~~~~~~~~l~~~~~~~iViACNTaS~~al~~lr~~~---~~PiiG 91 (105)
T d1b74a1 46 -----TIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEI---NVPVFG 91 (105)
T ss_dssp -----HHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHS---SSCEEE
T ss_pred -----HHHHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHC---CCCEEE
Confidence 1122334677889999999998755433333333333321 367654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.70 E-value=0.35 Score=38.84 Aligned_cols=40 Identities=23% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCCceEEEEeCC---C--CchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSD---T--GGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~---~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
...+|||++.+| . +.-....+...+++|++. |+++++++.
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~---g~~~iliN~ 49 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREE---GYRVINVNS 49 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH---TCEEEEECS
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc---CCeEEEecC
Confidence 455899999754 3 345677888889999999 999998865
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=86.48 E-value=0.66 Score=36.77 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=30.5
Q ss_pred CCCceEEEEeCC---CCc--hHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSD---TGG--GHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~---~Gg--Gh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
...+|||++.+| +|- -....+...+++|++. |+++++++..
T Consensus 2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~---g~~~IliN~N 47 (121)
T d1a9xa4 2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED---GYETIMVNCN 47 (121)
T ss_dssp SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT---TCEEEEECCC
T ss_pred CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc---CCeEEEEecC
Confidence 345799999765 443 3446777889999998 9999998653
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=86.47 E-value=1.1 Score=39.71 Aligned_cols=23 Identities=13% Similarity=0.283 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcc
Q 036427 234 IAREVAKGLMKYQPDIIISVHPL 256 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~ 256 (536)
....+.++|++++||+|+++.+.
T Consensus 83 ~~~~l~~~i~~~~PdiV~t~~~~ 105 (227)
T d1uana_ 83 QRLKLAQALRRLRPRVVFAPLEA 105 (227)
T ss_dssp HHHHHHHHHHHHCEEEEEEECSC
T ss_pred hhhhhhhheecccccEEEecCcc
Confidence 34578889999999999997754
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=80.72 E-value=14 Score=30.69 Aligned_cols=39 Identities=23% Similarity=0.241 Sum_probs=27.7
Q ss_pred hhhHHHHHhhcCeEEEC-CChHHHHH---HHHhC------CcEEEeccC
Q 036427 417 VSKMEEAMGACDCIITK-AGPGTIAE---AMIRG------LPIILNDFI 455 (536)
Q Consensus 417 v~~l~~ll~~aDv~V~~-sG~~tllE---Ama~G------lPVI~~~~~ 455 (536)
.+....++..||++|.- +|.+|+-| ++... +|+|+.+..
T Consensus 88 ~~Rk~~m~~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~ 136 (179)
T d1t35a_ 88 HERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVN 136 (179)
T ss_dssp HHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGG
T ss_pred HHHHHHHHHhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCC
Confidence 34567778899987764 45778766 55443 899998854
|