Citrus Sinensis ID: 036432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-
Protein Sequence
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADISL
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHcHHHcccccHHHHHHccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
HHHHccEEEEcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEcccccHHHHHHHHHHHHHHHHHHHcHHHccc
Coil and Loop (DISEMBL)
adllgspvirpadkeTTALGAAFADglaigvfkeeeifasgewaktsttfkpvlneegrKKKAESWCRAVERTFNLADISL
Flexible Loop (DISEMBL)
adllgspvirpadkeTTALGAAFADGLAIGVFKEEEIfasgewaktsttfkpvlneegrkkkaeswcravertfnladisl
Low Complexity Region (SEG)
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADISL
Disordered region (IsUnstruct)
****************TALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVL**********SWCRAVERTFN******
Disordered Region (DISOPRED)
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADISL
Disordered Region (DISEMBL)
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNE*********WCRAVERTFNLADISL
Disordered Region (DISPRO)
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADISL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADISL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	81	2.2.26 [Sep-21-2011]
Q893Q3	498	Glycerol kinase 1 OS=Clos	yes	no	0.901	0.146	0.48	5e-10
Q39V17	496	Glycerol kinase OS=Geobac	yes	no	0.864	0.141	0.458	1e-09
Q73LE9	496	Glycerol kinase OS=Trepon	yes	no	0.888	0.145	0.437	1e-09
Q2IZ89	501	Glycerol kinase OS=Rhodop	yes	no	0.851	0.137	0.464	1e-09
Q3AB25	500	Glycerol kinase OS=Carbox	yes	no	0.851	0.138	0.452	2e-09
A5ES06	500	Glycerol kinase OS=Bradyr	yes	no	0.851	0.138	0.478	2e-09
Q9X1E4	496	Glycerol kinase 2 OS=Ther	yes	no	0.888	0.145	0.459	2e-09
B3E6Z6	496	Glycerol kinase OS=Geobac	yes	no	0.876	0.143	0.479	2e-09
Q47ER3	502	Glycerol kinase OS=Dechlo	yes	no	0.962	0.155	0.437	2e-09
B3QH88	500	Glycerol kinase OS=Rhodop	yes	no	0.851	0.138	0.464	3e-09

>sp|Q893Q3|GLPK1_CLOTE Glycerol kinase 1 OS=Clostridium tetani (strain Massachusetts / E88) GN=glpK1 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 2/75 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV RP   ETTALGAA+  GLA+G +K+++  A   WA  S TF+P + +E R+
Sbjct: 421 ADILGVPVQRPEVIETTALGAAYLAGLAVGYWKDKKDVAQ-NWA-ISKTFEPDMIKERRE 478

Query: 61  KKAESWCRAVERTFN 75
           +  E W  AV+R+ N
Sbjct: 479 ELLEGWHEAVKRSMN 493

Key enzyme in the regulation of glycerol uptake and metabolism.
Clostridium tetani (strain Massachusetts / E88) (taxid: 212717)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 0

>sp|Q39V17|GLPK_GEOMG Glycerol kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glpK PE=3 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV+RP   ETTALGAA+  GLA+G++++ +  A G W +    F+P +  E   
Sbjct: 420 ADLLGVPVVRPRISETTALGAAYLAGLAVGLWRDRQEIA-GHW-QVDRIFEPAMGREQAA 477

Query: 61  KKAESWCRAVER 72
           +    W RAVER
Sbjct: 478 ELRGRWGRAVER 489

Key enzyme in the regulation of glycerol uptake and metabolism.

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) (taxid: 269799)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q73LE9|GLPK_TREDE Glycerol kinase OS=Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) GN=glpK PE=3 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 8/80 (10%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTT---FKPVLNEE 57
           +D+L  PV+RP +KETTALGAA+  GLA+G +KE+     GE  +       F+P + EE
Sbjct: 422 SDILNVPVLRPYEKETTALGAAYLAGLAVGFWKEQ-----GEIKRIQDIEREFRPDMEEE 476

Query: 58  GRKKKAESWCRAVERTFNLA 77
            RK     W +AVER+   A
Sbjct: 477 KRKTLYAGWKKAVERSMKWA 496

Key enzyme in the regulation of glycerol uptake and metabolism.

Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) (taxid: 243275)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q2IZ89|GLPK_RHOP2 Glycerol kinase OS=Rhodopseudomonas palustris (strain HaA2) GN=glpK PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLL +PV RP  +ETTALGAA+  GL+ GVF E + FA   W +    F+P +++  R+
Sbjct: 423 ADLLDAPVDRPVIQETTALGAAYLAGLSAGVFPEPQKFAD-NW-RLDHRFRPAMSQATRE 480

Query: 61  KKAESWCRAVE 71
           +K   W RAV+
Sbjct: 481 RKLAGWGRAVK 491

Key enzyme in the regulation of glycerol uptake and metabolism.

Rhodopseudomonas palustris (strain HaA2) (taxid: 316058)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q3AB25|GLPK_CARHZ Glycerol kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glpK PE=3 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 4/73 (5%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
           AD+LG PV RP + ETTA+GAA+  GLA+G + + +E+ A     K S  F+P ++E+ R
Sbjct: 423 ADILGVPVERPVNIETTAMGAAYLAGLAVGFWADKQELVAK---YKVSRRFEPTMDEQTR 479

Query: 60  KKKAESWCRAVER 72
           +K  + W RAV R
Sbjct: 480 EKLYKGWQRAVTR 492

Key enzyme in the regulation of glycerol uptake and metabolism.

Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) (taxid: 246194)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|A5ES06|GLPK_BRASB Glycerol kinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glpK PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLL +PV RP  +ETTALGAA+  GL  GV+ E E FA   W +    FKP ++   R+
Sbjct: 423 ADLLDAPVDRPMIQETTALGAAYLAGLNAGVYPEPEKFAD-NW-RLEHRFKPAMSAATRQ 480

Query: 61  KKAESWCRAVE 71
           +K   W RAV+
Sbjct: 481 RKLAGWARAVK 491

Key enzyme in the regulation of glycerol uptake and metabolism.

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) (taxid: 288000)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q9X1E4|GLPK2_THEMA Glycerol kinase 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=glpK2 PE=3 SV=2

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV RP   ETTALGAA+  GLA+G +K++E  AS  W +    F+P +N E R+
Sbjct: 420 ADILGVPVERPVVNETTALGAAYLAGLAVGYWKDQEEIAS-LW-QLDRRFEPSMNSEERE 477

Query: 61  KKAESWCRAVERTF 74
           +    W  AV R+ 
Sbjct: 478 RLYSKWKEAVSRSL 491

Key enzyme in the regulation of glycerol uptake and metabolism.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|B3E6Z6|GLPK_GEOLS Glycerol kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glpK PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV+RP  +ETTALGAA+  GLAIG +++ +   S  W +    F PVL  E   
Sbjct: 420 ADLLGVPVVRPRVRETTALGAAYLAGLAIGYWQDRKEL-SRLW-QAEQAFAPVLERERMA 477

Query: 61  KKAESWCRAVERT 73
           +   +W RAVER+
Sbjct: 478 ELRYNWNRAVERS 490

Key enzyme in the regulation of glycerol uptake and metabolism.

Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) (taxid: 398767)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q47ER3|GLPK_DECAR Glycerol kinase OS=Dechloromonas aromatica (strain RCB) GN=glpK PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV+RP   ETTALGAA+  GLA+G F ++E   +  W +    F+P + E+ R 
Sbjct: 425 ADLLGVPVVRPQVTETTALGAAYLAGLAVG-FWQDEAELTALW-RADRRFEPSMAEDRRS 482

Query: 61  KKAESWCRAVERTFNLADIS 80
                W RAVER+ + A+ +
Sbjct: 483 ALFADWHRAVERSLHWANAT 502

Key enzyme in the regulation of glycerol uptake and metabolism.

Dechloromonas aromatica (strain RCB) (taxid: 159087)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|B3QH88|GLPK_RHOPT Glycerol kinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glpK PE=3 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLL +PV RP  +ETTALGAA+  GL+ GVF E + FA   W +    F+P ++   R+
Sbjct: 423 ADLLDAPVDRPVIQETTALGAAYLAGLSAGVFPEPQKFAD-NW-RLDHRFRPAMSAATRE 480

Query: 61  KKAESWCRAVE 71
           +K   W RAV 
Sbjct: 481 RKLAGWARAVR 491

Key enzyme in the regulation of glycerol uptake and metabolism.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
117168061	522	At1g80460 [Arabidopsis thaliana]	1.0	0.155	0.641	5e-22
224134466	519	predicted protein [Populus trichocarpa]	1.0	0.156	0.740	3e-20
449436162	523	PREDICTED: glycerol kinase-like [Cucumis	1.0	0.154	0.716	6e-20
359483157	317	PREDICTED: LOW QUALITY PROTEIN: probable	0.987	0.252	0.629	2e-19
255553277	521	glycerol kinase, putative [Ricinus commu	1.0	0.155	0.703	4e-19
225463623	522	PREDICTED: probable glycerol kinase isof	1.0	0.155	0.691	7e-19
297743507	117	unnamed protein product [Vitis vinifera]	1.0	0.692	0.691	7e-19
147837886	522	hypothetical protein VITISV_037711 [Viti	1.0	0.155	0.691	7e-19
359482733	300	PREDICTED: probable glycerol kinase-like	1.0	0.27	0.691	8e-19
297839893	522	At1g80460 [Arabidopsis lyrata subsp. lyr	1.0	0.155	0.666	5e-18

>gi|117168061|gb|ABK32113.1| At1g80460 [Arabidopsis thaliana]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 64/81 (79%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADL+GSPV+RP D ETTALGAA+A  LA+G +KE +IF SGE AK S  F+P + E  RK
Sbjct: 442 ADLMGSPVVRPVDIETTALGAAYAARLAVGFWKEADIFESGEKAKNSKVFRPAMEEGIRK 501

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK  SWC+AVERTF+LAD+S+
Sbjct: 502 KKVASWCKAVERTFDLADLSI 522

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134466|ref|XP_002327412.1| predicted protein [Populus trichocarpa] gi|222835966|gb|EEE74387.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 72/81 (88%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLGSPV+RPAD ETTALGAA+A GLA+GV+ EEEIFASGE +K+ TTF+P LNEE RK
Sbjct: 439 ADLLGSPVVRPADIETTALGAAYAAGLAVGVWTEEEIFASGEKSKSDTTFRPKLNEELRK 498

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK +SW +AVERTF+LAD+S+
Sbjct: 499 KKVDSWFKAVERTFDLADLSI 519

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436162|ref|XP_004135863.1| PREDICTED: glycerol kinase-like [Cucumis sativus] gi|449509293|ref|XP_004163547.1| PREDICTED: glycerol kinase-like [Cucumis sativus]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 70/81 (86%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLGSPV+RPAD ETTALGAA+A GLA+G++ ++EIF SGE  K++TTF PVL EE RK
Sbjct: 443 ADLLGSPVVRPADIETTALGAAYAAGLAVGIWSKDEIFDSGERVKSATTFYPVLEEELRK 502

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AV RTF+LAD+SL
Sbjct: 503 KKVESWCKAVSRTFDLADLSL 523

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483157|ref|XP_003632913.1| PREDICTED: LOW QUALITY PROTEIN: probable glycerol kinase-like [Vitis vinifera]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLL +PV+RP D ETTALGAA+A GLA+G+  E+EIFASG  +  +TTF P L+EE R 
Sbjct: 238 ADLLRNPVVRPGDIETTALGAAYATGLAVGIXIEDEIFASGXLS-FATTFYPALDEEQRS 296

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESW +AV RTF+L D+SL
Sbjct: 297 KKVESWXKAVSRTFDLEDLSL 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553277|ref|XP_002517681.1| glycerol kinase, putative [Ricinus communis] gi|223543313|gb|EEF44845.1| glycerol kinase, putative [Ricinus communis]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 69/81 (85%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADL+G PV+RP+D ETTALGAA+A GLA+G++ E+EIFASGE AKT T F P L+EE RK
Sbjct: 441 ADLVGHPVVRPSDIETTALGAAYAAGLAVGIWTEKEIFASGEKAKTDTIFCPKLDEELRK 500

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AVERTF LAD+S+
Sbjct: 501 KKVESWCKAVERTFGLADLSI 521

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463623|ref|XP_002273367.1| PREDICTED: probable glycerol kinase isoform 1 [Vitis vinifera] gi|297743524|emb|CBI36391.3| unnamed protein product [Vitis vinifera]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG+PV+RPAD ETTALGAA+A GLA+G++ E+EIF SGE  K +TTF P L+EE R 
Sbjct: 442 ADLLGNPVVRPADIETTALGAAYAAGLAVGIWTEDEIFDSGEKVKLATTFYPALDEERRN 501

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AV RTF+LAD+SL
Sbjct: 502 KKVESWCKAVSRTFDLADLSL 522

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743507|emb|CBI36374.3| unnamed protein product [Vitis vinifera]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG+PV+RPAD ETTALGAA+A GLA+G++ E+EIF SGE  K +TTF P L+EE R 
Sbjct: 37  ADLLGNPVVRPADIETTALGAAYAAGLAVGIWTEDEIFDSGEKVKLATTFYPALDEERRN 96

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AV RTF+LAD+SL
Sbjct: 97  KKVESWCKAVSRTFDLADLSL 117

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147837886|emb|CAN76048.1| hypothetical protein VITISV_037711 [Vitis vinifera]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG+PV+RPAD ETTALGAA+A GLA+G++ E+EIF SGE  K +TTF P L+EE R 
Sbjct: 442 ADLLGNPVVRPADIETTALGAAYAAGLAVGIWTEDEIFDSGEKVKLATTFYPALDEERRN 501

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AV RTF+LAD+SL
Sbjct: 502 KKVESWCKAVSRTFDLADLSL 522

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482733|ref|XP_003632820.1| PREDICTED: probable glycerol kinase-like [Vitis vinifera]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG+PV+RPAD ETTALGAA+A GLA+G++ E+EIF SGE  K +TTF P L+EE R 
Sbjct: 220 ADLLGNPVVRPADIETTALGAAYAAGLAVGIWTEDEIFDSGEKVKLATTFYPALDEERRN 279

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK ESWC+AV RTF+LAD+SL
Sbjct: 280 KKVESWCKAVSRTFDLADLSL 300

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839893|ref|XP_002887828.1| At1g80460 [Arabidopsis lyrata subsp. lyrata] gi|297333669|gb|EFH64087.1| At1g80460 [Arabidopsis lyrata subsp. lyrata]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/81 (66%), Positives = 66/81 (81%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADL+GSPV+RP D ETTALGAA+A GLA+G +KE +IF SGE AK S  F+P + EE RK
Sbjct: 442 ADLMGSPVVRPVDIETTALGAAYAAGLAVGFWKEADIFESGEKAKNSKVFRPAMEEETRK 501

Query: 61  KKAESWCRAVERTFNLADISL 81
           KK  SWC+AVERTF+LAD+S+
Sbjct: 502 KKVASWCKAVERTFDLADLSI 522

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
TAIR|locus:2198928	522	NHO1 "nonhost resistance to P.	1.0	0.155	0.654	1.4e-23
TIGR_CMR|GSU_2762	496	GSU_2762 "glycerol kinase" [Ge	0.864	0.141	0.432	1.7e-09
TIGR_CMR|CHY_1839	500	CHY_1839 "glycerol kinase" [Ca	0.851	0.138	0.452	1.8e-09
DICTYBASE|DDB_G0280371	539	DDB_G0280371 "glycerol kinase"	0.888	0.133	0.410	1.4e-08
ASPGD|ASPL0000033397	567	AN5589 [Emericella nidulans (t	0.950	0.135	0.410	6.9e-08
TIGR_CMR|BA_1026	496	BA_1026 "glycerol kinase" [Bac	0.876	0.143	0.369	6.7e-07
TIGR_CMR|SPO_0104	492	SPO_0104 "glycerol kinase" [Ru	0.839	0.138	0.428	1.1e-06
UNIPROTKB|Q9KLJ9	505	glpK "Glycerol kinase" [Vibrio	0.839	0.134	0.430	1.5e-06
TIGR_CMR|VC_A0744	505	VC_A0744 "glycerol kinase" [Vi	0.839	0.134	0.430	1.5e-06
ZFIN|ZDB-GENE-080204-72	534	zgc:172295 "zgc:172295" [Danio	0.913	0.138	0.4	3.3e-06

TAIR|locus:2198928 NHO1 "nonhost resistance to P. s. phaseolicola 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 53/81 (65%), Positives = 65/81 (80%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             ADL+GSPV+RP D ETTALGAA+A GLA+G +KE +IF SGE AK S  F+P + E  RK
Sbjct:   442 ADLMGSPVVRPVDIETTALGAAYAAGLAVGFWKEADIFESGEKAKNSKVFRPAMEEGIRK 501

Query:    61 KKAESWCRAVERTFNLADISL 81
             KK  SWC+AVERTF+LAD+S+
Sbjct:   502 KKVASWCKAVERTFDLADLSI 522

GO:0004370 "glycerol kinase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS

GO:0006072 "glycerol-3-phosphate metabolic process" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0019200 "carbohydrate kinase activity" evidence=ISS

GO:0009617 "response to bacterium" evidence=IEP

GO:0019563 "glycerol catabolic process" evidence=IMP

GO:0002237 "response to molecule of bacterial origin" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

TIGR_CMR|GSU_2762 GSU_2762 "glycerol kinase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 32/74 (43%), Positives = 48/74 (64%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEE-EIFASGEWAKTSTTFKPVLNEEGR 59
             ADLLG PV+RP  +ETTALGAA+  GLA+G +++  EI   G   +   TF+P ++ +  
Sbjct:   420 ADLLGVPVVRPRVRETTALGAAYLAGLAVGYWRDRAEI---GRLWQAEHTFEPAMDRDRA 476

Query:    60 KKKAESWCRAVERT 73
              +   +W RA+ER+
Sbjct:   477 AELRSTWSRALERS 490

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

TIGR_CMR|CHY_1839 CHY_1839 "glycerol kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 147 (56.8 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 33/73 (45%), Positives = 48/73 (65%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
             AD+LG PV RP + ETTA+GAA+  GLA+G + + +E+ A     K S  F+P ++E+ R
Sbjct:   423 ADILGVPVERPVNIETTAMGAAYLAGLAVGFWADKQELVAK---YKVSRRFEPTMDEQTR 479

Query:    60 KKKAESWCRAVER 72
             +K  + W RAV R
Sbjct:   480 EKLYKGWQRAVTR 492

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

DICTYBASE|DDB_G0280371 DDB_G0280371 "glycerol kinase" [Dictyostelium discoideum (taxid:44689)]

 Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 32/78 (41%), Positives = 46/78 (58%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             +DLLG PV++P   ETT  GAAFA G+A GV+KE   F  G   K    F P L+E  + 
Sbjct:   465 SDLLGLPVVKPISLETTCFGAAFAAGIATGVWKETMQFKIG--GK----FTPQLDENHKT 518

Query:    61 KKAESWCRAVERTFNLAD 78
             +K + W +A+ ++ +  D
Sbjct:   519 QKLKEWKKAISKSLDWID 536

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0006072 "glycerol-3-phosphate metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004370 "glycerol kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0006071 "glycerol metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0019563 "glycerol catabolic process" evidence=IEA

ASPGD|ASPL0000033397 AN5589 [Emericella nidulans (taxid:162425)]

 Score = 133 (51.9 bits), Expect = 6.9e-08, P = 6.9e-08
 Identities = 32/78 (41%), Positives = 45/78 (57%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             AD++  PV RPA  ETTALGAA A G AI ++KE +   +   A   T+F P ++ E  +
Sbjct:   482 ADIIQIPVERPAMHETTALGAAIAAGFAIDIWKEFDELKNMNRANR-TSFTPAISREQSQ 540

Query:    61 KKAESWCRAVERTFNLAD 78
             K  + W +AVE +    D
Sbjct:   541 KMYKQWTKAVEMSRGWVD 558

GO:0004370 "glycerol kinase activity" evidence=RCA;IMP

GO:0006071 "glycerol metabolic process" evidence=RCA;IMP

GO:0005575 "cellular_component" evidence=ND

GO:0006072 "glycerol-3-phosphate metabolic process" evidence=IEA

TIGR_CMR|BA_1026 BA_1026 "glycerol kinase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 123 (48.4 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 27/73 (36%), Positives = 41/73 (56%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             +D+L  PV RP   ETTALGAA+  GLA+G +K ++     +W      F+P +  E  +
Sbjct:   422 SDILDVPVERPVINETTALGAAYLAGLAVGYWKNQDEIKE-QW-HMDKRFEPTMEAETSE 479

Query:    61 KKAESWCRAVERT 73
             +    W +A+E T
Sbjct:   480 ELYAGWKKAIEAT 492

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

TIGR_CMR|SPO_0104 SPO_0104 "glycerol kinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 30/70 (42%), Positives = 40/70 (57%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             AD LG+PV RP  +ETTALGAA+  G+  GV+ ++  FA+  WA     F P + E  R+
Sbjct:   419 ADRLGAPVDRPVMQETTALGAAWLAGMRAGVYPDQAGFAA-TWA-LDARFTPKMVEGDRE 476

Query:    61 KKAESWCRAV 70
                  W  AV
Sbjct:   477 AAYRRWKAAV 486

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

UNIPROTKB|Q9KLJ9 glpK "Glycerol kinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 31/72 (43%), Positives = 46/72 (63%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
             AD+L + V RP   E TALGAA+  GLA+G +   EE+   G+ A+   +FKP  +EE R
Sbjct:   424 ADVLDTEVHRPKVTEVTALGAAYLAGLAVGFWDGLEEL--QGK-AEIDRSFKPHHDEEKR 480

Query:    60 KKKAESWCRAVE 71
             +++ + W RAV+
Sbjct:   481 QRRYKGWKRAVK 492

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

TIGR_CMR|VC_A0744 VC_A0744 "glycerol kinase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 31/72 (43%), Positives = 46/72 (63%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
             AD+L + V RP   E TALGAA+  GLA+G +   EE+   G+ A+   +FKP  +EE R
Sbjct:   424 ADVLDTEVHRPKVTEVTALGAAYLAGLAVGFWDGLEEL--QGK-AEIDRSFKPHHDEEKR 480

Query:    60 KKKAESWCRAVE 71
             +++ + W RAV+
Sbjct:   481 QRRYKGWKRAVK 492

GO:0004370 "glycerol kinase activity" evidence=ISS

GO:0006071 "glycerol metabolic process" evidence=ISS

ZFIN|ZDB-GENE-080204-72 zgc:172295 "zgc:172295" [Danio rerio (taxid:7955)]

 Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 30/75 (40%), Positives = 41/75 (54%)

Query:     1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
             AD+L  PV++P+  ETTALGAA A G A GV     +        TS  F+P +N E  +
Sbjct:   445 ADILCIPVVKPSMPETTALGAAMAAGAAEGV-SVWSLNPEDLTEVTSEKFEPQINPEESE 503

Query:    61 KKAESWCRAVERTFN 75
              +   W +AV+R  N
Sbjct:   504 LRYARWKKAVQRAMN 518

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006072 "glycerol-3-phosphate metabolic process" evidence=IEA

GO:0004370 "glycerol kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	81
PLN02295	512	PLN02295, PLN02295, glycerol kinase	3e-34
cd07796	503	cd07796, FGGY_NHO1_plant, Arabidopsis NHO1 and rel	1e-25
TIGR01311	493	TIGR01311, glycerol_kin, glycerol kinase	2e-21
PRK00047	498	PRK00047, glpK, glycerol kinase; Provisional	1e-19
COG0554	499	COG0554, GlpK, Glycerol kinase [Energy production	3e-18
cd07789	495	cd07789, FGGY_CsGK_like, Cellulomonas sp	7e-18
cd07786	486	cd07786, FGGY_EcGK_like, Escherichia coli glycerol	1e-17
PTZ00294	504	PTZ00294, PTZ00294, glycerol kinase-like protein;	1e-16
cd07769	484	cd07769, FGGY_GK, Glycerol kinases; a subfamily of	9e-15
cd07792	504	cd07792, FGGY_GK1-3_metazoa, Metazoan glycerol kin	1e-13
cd07795	496	cd07795, FGGY_ScGut1p_like, Saccharomyces cerevisi	9e-12
cd07793	504	cd07793, FGGY_GK5_metazoa, metazoan glycerol kinas	5e-11
cd10427	487	cd10427, FGGY_GK_1, Uncharacterized subgroup; belo	1e-08
PRK10939	520	PRK10939, PRK10939, autoinducer-2 (AI-2) kinase; P	2e-06
cd07804	492	cd07804, FGGY_XK_like_1, uncharacterized xylulose	1e-05
cd07791	484	cd07791, FGGY_GK2_bacteria, bacterial glycerol kin	1e-04
cd07779	488	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like	3e-04
cd07808	482	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xyl	4e-04
cd07802	447	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamil	9e-04
COG1070	502	COG1070, XylB, Sugar (pentulose and hexulose) kina	0.001
cd07805	514	cd07805, FGGY_XK_like_2, uncharacterized xylulose	0.001

>gnl|CDD|215166 PLN02295, PLN02295, glycerol kinase

 Score =  121 bits (305), Expect = 3e-34
 Identities = 55/81 (67%), Positives = 70/81 (86%), Gaps = 1/81 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLGSPV+RPAD ETTALGAA+A GLA+G++ EEEIFAS +W K +TTF+P L+EE R 
Sbjct: 433 ADLLGSPVVRPADIETTALGAAYAAGLAVGLWTEEEIFASEKW-KNTTTFRPKLDEEERA 491

Query: 61  KKAESWCRAVERTFNLADISL 81
           K+  SWC+AVER+F+LAD+S+
Sbjct: 492 KRYASWCKAVERSFDLADLSI 512

Length = 512

>gnl|CDD|198368 cd07796, FGGY_NHO1_plant, Arabidopsis NHO1 and related proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 97.3 bits (242), Expect = 1e-25
 Identities = 39/67 (58%), Positives = 50/67 (74%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADL+GSPV+RP D ETTALGAA+A GLA+GV+ EE+IF SG   +  T F P + ++ RK
Sbjct: 437 ADLMGSPVVRPVDIETTALGAAYAAGLAVGVWTEEQIFESGAKQEAPTVFHPQITDDERK 496

Query: 61  KKAESWC 67
           K+  SWC
Sbjct: 497 KRCLSWC 503

This subgroup includes Arabidopsis NHO1 (also known as NONHOST1, or noh-host resistant 1) and other putative plant glycerol kinases, which share strong homology with glycerol kinases from bacteria, fungi, and animals. Nonhost resistance of plants refers to the phenomenon observed when all members of a plant species are typically resistant to a specific parasite. NHO1 is required for nonspecific resistance to nonhost Pseudomonas bacteria, it is also required for resistance to the fungal pathogen Botrytis cinerea. This subgroup belongs to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 503

>gnl|CDD|233353 TIGR01311, glycerol_kin, glycerol kinase

 Score = 85.8 bits (213), Expect = 2e-21
 Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFK-EEEIFASGEWAKTSTTFKPVLNEEGR 59
           AD+LG PV+RP   ETTALGAA+A GLA+G +K  EEI A     K   TF+P ++EE R
Sbjct: 420 ADILGVPVVRPKVTETTALGAAYAAGLAVGYWKSLEEIEALWRVEK---TFEPEMDEEER 476

Query: 60  KKKAESWCRAVERTFN 75
           + +   W  AV+R+  
Sbjct: 477 EARYAGWKEAVKRSLG 492

This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases [Energy metabolism, Other]. Length = 493

>gnl|CDD|234594 PRK00047, glpK, glycerol kinase; Provisional

 Score = 81.0 bits (201), Expect = 1e-19
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
           AD+LG PV RP   ETTALGAA+  GLA+G +K+ +E+    E  K    F+P ++EE R
Sbjct: 424 ADILGVPVERPVVAETTALGAAYLAGLAVGFWKDLDEL---KEQWKIDRRFEPQMDEEER 480

Query: 60  KKKAESWCRAVERTFN 75
           +K    W +AV+RT  
Sbjct: 481 EKLYAGWKKAVKRTLA 496

Length = 498

>gnl|CDD|223628 COG0554, GlpK, Glycerol kinase [Energy production and conversion]

 Score = 76.9 bits (190), Expect = 3e-18
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV RP   ETTALGAA+  GLA+G +K+ +  A  E       F+P ++EE R+
Sbjct: 423 ADILGVPVERPVVLETTALGAAYLAGLAVGFWKDLDELA--ELWPLDKEFEPGMDEEERE 480

Query: 61  KKAESWCRAVERT 73
           +    W +AV+R+
Sbjct: 481 ELYAGWKKAVKRS 493

Length = 499

>gnl|CDD|198362 cd07789, FGGY_CsGK_like, Cellulomonas sp

 Score = 75.5 bits (186), Expect = 7e-18
 Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV+RP   ETTALGAA+A GLA+G +K+ +   S  W++   T+ P ++   R+
Sbjct: 422 ADILGVPVVRPKVAETTALGAAYAAGLAVGFWKDTDELRS-NWSE-DKTWTPSMDPAERE 479

Query: 61  KKAESWCRAVERTFN 75
           +  + W +AV RTF+
Sbjct: 480 RLYDGWKKAVTRTFD 494

glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup corresponds to a small group of bacterial glycerol kinases (GK) with similarity to Cellulomonas sp. glycerol kinase (CsGK). CsGK might exist as a dimer. Its monomer is composed of two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The regulation of the catalytic activity of this group has not yet been examined. Members in this subgroup belong to the FGGY family of carbohydrate kinases. Length = 495

>gnl|CDD|198361 cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 75.2 bits (186), Expect = 1e-17
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV RP   ETTALGAA+  GLA+G++K  +  A   W +    F+P ++EE R+
Sbjct: 418 ADILGVPVERPKVTETTALGAAYLAGLAVGLWKSLDELAKL-W-QVDRRFEPSMSEEERE 475

Query: 61  KKAESWCRAVE 71
                W +AV+
Sbjct: 476 ALYAGWKKAVK 486

This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases. Length = 486

>gnl|CDD|240348 PTZ00294, PTZ00294, glycerol kinase-like protein; Provisional

 Score = 71.9 bits (177), Expect = 1e-16
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG  ++ P   ETTALGAA   GLA+GV+K  E        ++++TF P ++ E RK
Sbjct: 427 ADILGKDIVVPEMAETTALGAALLAGLAVGVWKSLEEVKKLI-RRSNSTFSPQMSAEERK 485

Query: 61  KKAESWCRAVERTFNLADI 79
              + W +AVER+   A +
Sbjct: 486 AIYKEWNKAVERSLKWAKL 504

Length = 504

>gnl|CDD|198347 cd07769, FGGY_GK, Glycerol kinases; a subfamily of the FGGY family of carbohydrate kinases

 Score = 66.9 bits (164), Expect = 9e-15
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV RP   ETTALGAA+  GLA+G + + +   +    K+   F P ++   R+
Sbjct: 420 ADILGVPVERPETAETTALGAAYLAGLAVGFWSDLDELQALR--KSDRVFSPTMDASERE 477

Query: 61  KKAESWC 67
           K+ + W 
Sbjct: 478 KRYKGWK 484

This subfamily includes glycerol kinases (GK; EC 2.7.1.30) and glycerol kinase-like proteins from all three kingdoms of living organisms. Glycerol is an important intermediate of energy metabolism and it plays fundamental roles in several vital physiological processes. GKs are involved in the entry of external glycerol into cellular metabolism. They catalyze the rate-limiting step in glycerol metabolism by transferring a phosphate from ATP to glycerol thus producing glycerol 3-phosphate (G3P) in the cytoplasm. Human GK deficiency, called hyperglycerolemia, is an X-linked recessive trait associated with psychomotor retardation, osteoporosis, spasticity, esotropia, and bone fractures. Under different conditions, GKs from different species may exist in different oligomeric states. The monomer of GKs is composed of two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of GKs is created only by a substrate-induced conformational change. Based on sequence similarity, some GK-like proteins from metazoa, which have lost their GK enzymatic activity, are also included in this CD. Members in this subfamily belong to the FGGY family of carbohydrate kinases. Length = 484

>gnl|CDD|212664 cd07792, FGGY_GK1-3_metazoa, Metazoan glycerol kinase 1 and 3-like proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 63.9 bits (156), Expect = 1e-13
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 7/78 (8%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTST---TFKPVLNEE 57
           AD+LG PV+RP+  ETTALGAA A G A GV    E+++      ++    TF P + EE
Sbjct: 430 ADILGIPVVRPSMPETTALGAAMAAGAAKGV----EVWSLEPEDLSAVTFETFLPSITEE 485

Query: 58  GRKKKAESWCRAVERTFN 75
            R  +   W  AV+R+  
Sbjct: 486 ERNIRYAKWKMAVQRSLG 503

This subgroup corresponds to a group of metazoan glycerol kinases (GKs), coded by X chromosome-linked GK genes, and glycerol kinase (GK)-like proteins, coded by autosomal testis-specific GK-like genes (GK-like genes, GK1 and GK3). Sequence comparison shows that metazoan GKs and GK-like proteins in this family are closely related to the bacterial GKs, which catalyze the Mg-ATP dependent phosphorylation of glycerol to yield glycerol 3-phosphate (G3P). The metazoan GKs do have GK enzymatic activity. However, the GK-like metazoan proteins do not exhibit GK activity and their biological functions are not yet clear. Some of them lack important functional residues involved in the binding of ADP and Mg2+, which may result in the loss of GK catalytic function. Others that have conserved catalytic residues have lost their GK activity as well; the reason remains unclear. It has been suggested the conserved catalytic residues might facilitate them performing a distinct function. GKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 504

>gnl|CDD|198367 cd07795, FGGY_ScGut1p_like, Saccharomyces cerevisiae Gut1p and related proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 58.2 bits (141), Expect = 9e-12
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 9/70 (12%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE----EEIFASGEWAKTSTTFKPVLNE 56
           AD+LG PV RP  +E+TALGAA A G A+G+F      ++I   G     +T FKP  ++
Sbjct: 430 ADILGIPVERPEMRESTALGAAIAAGFAVGLFGWDLTLKDINTEG-----NTVFKPKTDD 484

Query: 57  EGRKKKAESW 66
           E R K  + W
Sbjct: 485 EERAKMWKQW 494

This subgroup corresponds to a small group of fungal glycerol kinases (GK), including Saccharomyces cerevisiae Gut1p/YHL032Cp, which phosphorylates glycerol to glycerol-3-phosphate in the cytosol. Glycerol utilization has been considered as the sole source of carbon and energy in S. cerevisiae, and is mediated by glycerol kinase and glycerol 3-phosphate dehydrogenase, which is encoded by the GUT2 gene. Members in this family show high similarity to their prokaryotic and eukaryotic homologs. GKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 496

>gnl|CDD|212665 cd07793, FGGY_GK5_metazoa, metazoan glycerol kinase 5-like proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 56.2 bits (136), Expect = 5e-11
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
           ADL G PV R    E +ALGAA+  GLA+G++K  EE+    +  K    F+P  N   +
Sbjct: 433 ADLTGLPVERADSTEMSALGAAYLAGLAVGLWKNKEELK---KLRKVEKIFEPKPNIRKK 489

Query: 60  KKKA-ESWCRAVERT 73
                + W RAV+R 
Sbjct: 490 YLPIMKKWERAVKRF 504

This subgroup corresponds to a group of metazoan putative glycerol kinases (GK), which may be coded by the GK-like gene, GK5. Sequence comparison shows members of this group are homologs of bacterial GKs, and they retain all functionally important residues. However, GK-like proteins in this family do not have detectable GK activity. The reason remains unclear. It has been suggested tha the conserved catalytic residues might facilitate them performing a distinct function. GKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 504

>gnl|CDD|198378 cd10427, FGGY_GK_1, Uncharacterized subgroup; belongs to the glycerol kinases subfamily of the FGGY family of carbohydrate kinases

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L +PV     +E +ALGAA+A GLA+G++ +E + A        T ++P ++EE R 
Sbjct: 419 ADILNAPVKVSNIEELSALGAAYAAGLALGLYNQEFLEAKE----YRTKYEPCMDEEVRN 474

Query: 61  KKAESWCRAVERT 73
           +K   W  AV + 
Sbjct: 475 RKYSGWKEAVRKV 487

This subgroup contains uncharacterized bacterial proteins belonging to the glycerol kinase subfamily of the FGGY family of carbohydrate kinases. The glycerol kinase subfamily includes glycerol kinases (GK; EC 2.7.1.30), and glycerol kinase-like proteins from all three kingdoms of living organisms. Glycerol is an important intermediate of energy metabolism and it plays fundamental roles in several vital physiological processes. GKs are involved in the entry of external glycerol into cellular metabolism. They catalyze the rate-limiting step in glycerol metabolism by transferring a phosphate from ATP to glycerol thus producing glycerol 3-phosphate (G3P) in the cytoplasm. Under different conditions, GKs from different species may exist in different oligomeric states. The monomer of GKs is composed of two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 487

>gnl|CDD|182853 PRK10939, PRK10939, autoinducer-2 (AI-2) kinase; Provisional

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVL-NEEGR 59
           AD+ G PV  P  KE TALG A A G+  G++            +   TF+P   N E  
Sbjct: 430 ADVTGLPVKVPVVKEATALGCAIAAGVGAGIYSSLAE-TGERLVRWERTFEPNPENHELY 488

Query: 60  KKKAESWCRAVERTFNLADISL 81
           ++  E W         L D  L
Sbjct: 489 QEAKEKWQAVYADQLGLVDHGL 510

Length = 520

>gnl|CDD|198372 cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+LG PV+ P +    +LG A    +A+GV+ + E      W K   T +P  + E  +
Sbjct: 417 ADVLGLPVVTPENTVGASLGDALLAAVAVGVYDDLEEVK--AWVKVRETIEP--DPENHE 472

This subgroup is composed of uncharacterized bacterial and archaeal xylulose kinases-like proteins with similarity to bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. The presence of Mg2+ or Mn2+ is required for catalytic activity. D-XK exists as a dimer with an active site that lies at the interface between the N- and C-terminal domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Members of this subgroup belong to the FGGY family of carbohydrate kinases. Length = 492

>gnl|CDD|198363 cd07791, FGGY_GK2_bacteria, bacterial glycerol kinase 2-like proteins; belongs to the FGGY family of carbohydrate kinases

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PVIR    E +ALGAA   G A+G + +     +        T  PV++   R 
Sbjct: 415 ADLLGRPVIRSDTPEVSALGAALLAGKALGWWSDLADLTAL--PDGRRTIAPVIDAAARA 472

Query: 61  KKAESWCRAVER 72
                W +A+ R
Sbjct: 473 GARNLWKKAIAR 484

This subgroup corresponds to a group of putative bacterial glycerol kinases (GK), which may be coded by the GK-like gene, GK2. Sequence comparison shows members in this CD are homologs of Escherichia coli GK. They retain all functionally important residues, and may catalyze the Mg-ATP dependent phosphorylation of glycerol to yield glycerol 3-phosphate (G3P). GKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 484

>gnl|CDD|212662 cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           AD+ G PV RP   E + LGAA A  +  G + +    A     +   TF+P
Sbjct: 426 ADIFGLPVERPHTYEASGLGAAIAAAVGAGWYPDFAE-AVAAMVRVGKTFEP 476

This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 488

>gnl|CDD|198374 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           AD+LG PV     +E  ALGAA    +  G +   E  A     K   T +P
Sbjct: 412 ADVLGLPVDTLKGEEGPALGAAILAAVGAGWYPSVEEAAL-AVPKVEETIEP 462

This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. D-xylulose has been used as a source of carbon and energy by a variety of microorganisms. Some uncharacterized sequences are also included in this subgroup. The prototypical member of this CD is Escherichia coli xylulokinase (EcXK), which exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ is required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases. Length = 482

>gnl|CDD|212666 cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIG 30
           AD+LG PV     +E  ALGAA A  +A+G
Sbjct: 418 ADVLGLPVEVVEGEELGALGAAIAAAVALG 447

This subfamily is composed of bacterial L-xylulose kinases (L-XK, also known as L-xylulokinase; EC 2.7.1.53), which catalyze the ATP-dependent phosphorylation of L-xylulose to produce L-xylulose 5-phosphate and ADP. The presence of Mg2+ might be required for catalytic activity. Some uncharacterized sequences are also included in this subfamily. L-XKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Length = 447

>gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWA 44
           AD LG PV+ P  +E  ALG A     A  +    +       A
Sbjct: 422 ADALGLPVVVPEVEEAGALGGAAL--AAAALGGIYDSAEGALKA 463

Length = 502

>gnl|CDD|198373 cd07805, FGGY_XK_like_2, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases

 Score = 34.9 bits (81), Expect = 0.001
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 1   ADLLGSPVIRPAD-KETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           AD+LG P+ R  D +E  A GAA    + +G+    +        +   TF+P
Sbjct: 435 ADVLGRPIRRVEDPEEAGARGAAAIAAVGLGLLSFFDAAGQ--LVRVDRTFEP 485

This subgroup is composed of uncharacterized proteins with similarity to bacterial D-Xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. The presence of Mg2+ or Mn2+ is required for catalytic activity. D-XK exists as a dimer with an active site that lies at the interface between the N- and C-terminal domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Members of this subgroup belong to the FGGY family of carbohydrate kinases. Length = 514

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	81
COG0554	499	GlpK Glycerol kinase [Energy production and conver	99.75
TIGR01311	493	glycerol_kin glycerol kinase. This model describes	99.71
PRK00047	498	glpK glycerol kinase; Provisional	99.69
PTZ00294	504	glycerol kinase-like protein; Provisional	99.68
PLN02295	512	glycerol kinase	99.67
PRK10939	520	autoinducer-2 (AI-2) kinase; Provisional	99.64
TIGR01315	541	5C_CHO_kinase FGGY-family pentulose kinase. This m	99.61
TIGR01314	505	gntK_FGGY gluconate kinase, FGGY type. Gluconate i	99.6
PRK15027	484	xylulokinase; Provisional	99.57
TIGR01234	536	L-ribulokinase L-ribulokinase. This enzyme catalyz	99.56
PRK04123	548	ribulokinase; Provisional	99.54
TIGR01312	481	XylB D-xylulose kinase. D-xylulose kinase (XylB) g	99.51
KOG2517	516	consensus Ribulose kinase and related carbohydrate	99.43
PRK10640	471	rhaB rhamnulokinase; Provisional	99.29
PRK10331	470	L-fuculokinase; Provisional	99.25
COG1069	544	AraB Ribulose kinase [Energy production and conver	99.08
TIGR02628	465	fuculo_kin_coli L-fuculokinase. Members of this fa	99.07
COG1070	502	XylB Sugar (pentulose and hexulose) kinases [Carbo	98.94
TIGR02627	454	rhamnulo_kin rhamnulokinase. This model describes	98.4
PLN02669	556	xylulokinase	98.23
PF02782	198	FGGY_C: FGGY family of carbohydrate kinases, C-ter	98.21
KOG2531	545	consensus Sugar (pentulose and hexulose) kinases [	96.6
COG1924	396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	89.0
TIGR03286	404	methan_mark_15 putative methanogenesis marker prot	87.79
PF03727	243	Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexo	87.75
TIGR03192	293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	84.3

>COG0554 GlpK Glycerol kinase [Energy production and conversion]

Probab=99.75  E-value=2.6e-18  Score=117.06  Aligned_cols=76  Identities=41%  Similarity=0.716  Sum_probs=69.9

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      |||||+||+||...|++|+|||++|++++|+|++.+++ .+.... .+.|+|.++....+++|..|++++++++.|.+
T Consensus       423 ADilg~~V~Rp~~~EtTAlGaA~lAGla~G~w~~~~el-~~~~~~-~~~f~p~m~~~~r~~~y~~W~~AV~rs~~~~~  498 (499)
T COG0554         423 ADILGVPVERPVVLETTALGAAYLAGLAVGFWKDLDEL-AELWPL-DKEFEPGMDEEEREELYAGWKKAVKRSLGWRK  498 (499)
T ss_pred             HHHhCCeeeccccchhhHHHHHHHHhhhhCcCCCHHHH-Hhhhcc-cceeCCCCCHHHHHHHHHHHHHHHHHHhcccc
Confidence            79999999999999999999999999999999999998 555663 77999999988899999999999999999954

>TIGR01311 glycerol_kin glycerol kinase

Probab=99.71  E-value=2.8e-17  Score=113.19  Aligned_cols=74  Identities=46%  Similarity=0.788  Sum_probs=68.3

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||++++..|++++|||++|++++|.|.+++++ ..+.+. .++|+|++++..|+++|+.|+++++++++|
T Consensus       420 ADv~g~pv~~~~~~e~~alGaA~~a~~~~G~~~~~~~a-~~~~~~-~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~  493 (493)
T TIGR01311       420 ADILGVPVVRPKVTETTALGAAYAAGLAVGYWKSLEEI-EALWRV-EKTFEPEMDEEEREARYAGWKEAVKRSLGW  493 (493)
T ss_pred             HHhcCCeeEecCCCcchHHHHHHHHHhhcCcCCCHHHH-HHhcCC-CcEECCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999998886 777764 779999999877999999999999999988

This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.

>PRK00047 glpK glycerol kinase; Provisional

Probab=99.69  E-value=8.5e-17  Score=110.92  Aligned_cols=75  Identities=45%  Similarity=0.772  Sum_probs=67.8

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLA   77 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~   77 (81)
                      |||||+||++++..|++++|||++|++++|.+++++++ ..+.+. .++|+|++++..|+++|+.|+++|+++..|.
T Consensus       424 ADvlg~pV~~~~~~e~~a~GaA~~A~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~~  498 (498)
T PRK00047        424 ADILGVPVERPVVAETTALGAAYLAGLAVGFWKDLDEL-KEQWKI-DRRFEPQMDEEEREKLYAGWKKAVKRTLAWA  498 (498)
T ss_pred             HHhhCCeeEecCcccchHHHHHHHHhhhcCcCCCHHHH-HhhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence            79999999999999999999999999999999998876 666663 6789999998679999999999999998883

>PTZ00294 glycerol kinase-like protein; Provisional

Probab=99.68  E-value=1.2e-16  Score=110.31  Aligned_cols=77  Identities=42%  Similarity=0.647  Sum_probs=66.9

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      |||||+||++++..|++++|||++|+.++|.+++++++ ..+.....++|+|++++..|+++|+.|+++|++++.|.+
T Consensus       427 Adv~g~pV~~~~~~e~~alGaAl~aa~a~G~~~~~~~~-~~~~~~~~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~~~  503 (504)
T PTZ00294        427 ADILGKDIVVPEMAETTALGAALLAGLAVGVWKSLEEV-KKLIRRSNSTFSPQMSAEERKAIYKEWNKAVERSLKWAK  503 (504)
T ss_pred             HHHhCCceEecCcccchHHHHHHHHHhhcCccCCHHHH-HHhccCCCcEECCCCCHHHHHHHHHHHHHHHHHHhcccc
Confidence            79999999999999999999999999999999998876 444431256899999985599999999999999999853

>PLN02295 glycerol kinase

Probab=99.67  E-value=2e-16  Score=109.48  Aligned_cols=77  Identities=69%  Similarity=1.157  Sum_probs=67.5

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      |||||+||+++...|++++|||++|+++.|.|++.+++...+... .++|+|++++..|+++|++|+++|++++.|..
T Consensus       433 ADv~g~pV~~~~~~e~~alGaA~~A~~~~G~~~~~~~~~~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~  509 (512)
T PLN02295        433 ADLLGSPVVRPADIETTALGAAYAAGLAVGLWTEEEIFASEKWKN-TTTFRPKLDEEERAKRYASWCKAVERSFDLAD  509 (512)
T ss_pred             HHhcCCceEecCccccHHHHHHHHHHhhcCcCCCHHHHHHhccCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhcchh
Confidence            799999999999999999999999999999998876652356653 67899999986699999999999999998854

>PRK10939 autoinducer-2 (AI-2) kinase; Provisional

Probab=99.64  E-value=5.8e-16  Score=107.33  Aligned_cols=76  Identities=29%  Similarity=0.397  Sum_probs=66.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhchh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNLA   77 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~~   77 (81)
                      |||||+||++++..|++++|||++|++++|.|++++++...+.+. .++|+|++++. .|+++|++|+++|.++..+.
T Consensus       430 ADvlg~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~~~~-~~~~~P~~~~~~~y~~~y~~y~~l~~~~~~~~  506 (520)
T PRK10939        430 ADVTGLPVKVPVVKEATALGCAIAAGVGAGIYSSLAETGERLVRW-ERTFEPNPENHELYQEAKEKWQAVYADQLGLV  506 (520)
T ss_pred             HHhcCCeeEEecccCchHHHHHHHHHHHhCCCCCHHHHHHHHccc-CceECcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999987764555553 67899999886 79999999999998877663

>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase

Probab=99.61  E-value=1.4e-15  Score=105.89  Aligned_cols=75  Identities=20%  Similarity=0.098  Sum_probs=64.8

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH--HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE--GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~--~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||+++...|++++|||++|++++|.+.+++++...+.+. .++|+|++++.  .|+++|++|+++++++..+
T Consensus       464 ADvlg~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~~~~-~~~~~P~~~~~~~~Y~~~y~~y~~l~~~~~~~  540 (541)
T TIGR01315       464 ADACDMPVLIPYVNEAVLHGAAMLGAKAAGTTESLWDAMDRMSKP-GKTVWPRGDPAKKLHDRKYEIFLQLARTQQEY  540 (541)
T ss_pred             HHHHCCeeEecChhHHHHHHHHHHHHHhcCccCCHHHHHHHhccC-CcEEcCCcchhHHHHHHHHHHHHHHHHHHHhh
Confidence            799999999999999999999999999999999987764556553 67899999875  5999999999999876543

This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.

>TIGR01314 gntK_FGGY gluconate kinase, FGGY type

Probab=99.60  E-value=1.6e-15  Score=104.83  Aligned_cols=74  Identities=15%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||++++..|++++|||++|++++|.+++++++ ..+... .++|+|++++. .|+++|+.|+++++++..+
T Consensus       422 Adv~g~pv~~~~~~e~~a~GaA~la~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~Y~~~y~~y~~~~~~~~~~  496 (505)
T TIGR01314       422 SDIFEQEIVVPESYESSCLGACILGLKALGLIEDFSEV-STMVGT-TETHTPIEKNFEIYREISPIFINLSRSLLAE  496 (505)
T ss_pred             HHHcCCeeEecCCCCcchHHHHHHHHHhcCccCCHHHH-HHhcCC-CceECcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999998876 666664 67899999886 7999999999999988764

Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.

>PRK15027 xylulokinase; Provisional

Probab=99.57  E-value=7e-15  Score=101.20  Aligned_cols=74  Identities=19%  Similarity=0.141  Sum_probs=62.2

Q ss_pred             CCcCCCceecCCC-CchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPAD-KETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~-~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||+++.. .+++++|||++|++++|.+++++++ ..+.+. .++|+|++++. .|+++|+.|+++|.++..+
T Consensus       407 Adv~g~pv~~~~~~~~~~a~GaA~lA~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~Y~~~~~~y~~~y~~~~~~  482 (484)
T PRK15027        407 ADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIEL-LPQLPL-EQSHLPDAQRYAAYQPRRETFRRLYQQLLPL  482 (484)
T ss_pred             HHHhCCeEEeecCCCcchHHHHHHHHHHhcCCcCCHHHH-HhhcCC-CceECCCHHHHHHHHHHHHHHHHHHHHHhHh
Confidence            7999999976654 4588999999999999999998876 455553 67899999986 7999999999999887543

>TIGR01234 L-ribulokinase L-ribulokinase

Probab=99.56  E-value=8.4e-15  Score=101.93  Aligned_cols=75  Identities=20%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccc-cccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEW-AKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~-~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||++++..|++++|||++|++++|.+++++++...+. . ..++|+|++++. .|+++|++|+++|++.-++
T Consensus       457 Adv~g~pV~~~~~~e~~a~GaA~lA~~~~G~~~~~~~~~~~~~~~-~~~~~~P~~~~~~~y~~~y~~y~~l~~~~~~~  533 (536)
T TIGR01234       457 ADVTNRPLQIVASDQAPALGAAIFAAVAAGVYADIPSAQAKMGSA-VEKTLTPCSENAQRYEQLYARYQELAMSFGQY  533 (536)
T ss_pred             HHhhCCeeEeccCCcchhHHHHHHHHHHcCCcCCHHHHHHHhhcc-CCceECCChhHHHHHHHHHHHHHHHHHHHhhc
Confidence            7999999999999999999999999999999999877644453 3 266899999885 7999999999999885444

This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.

>PRK04123 ribulokinase; Provisional

Probab=99.54  E-value=1.5e-14  Score=100.81  Aligned_cols=73  Identities=19%  Similarity=0.237  Sum_probs=62.2

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERT   73 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~   73 (81)
                      |||||+||+++...|++++|||++|+++.|.+++++++...+.....++|+|+++.. .|+++|++|+++++..
T Consensus       460 ADv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~~y~~~y~~y~~l~~~~  533 (548)
T PRK04123        460 ADVLNRPIQVVASDQCPALGAAIFAAVAAGAYPDIPEAQQAMASPVEKTYQPDPENVARYEQLYQEYKQLHDYF  533 (548)
T ss_pred             HHhcCCceEecCccccchHHHHHHHHHHhccCCCHHHHHHHhhccCceEEecCHHHHHHHHHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999987763444321245799999885 7999999999998765

>TIGR01312 XylB D-xylulose kinase

Probab=99.51  E-value=2.4e-14  Score=97.99  Aligned_cols=69  Identities=23%  Similarity=0.343  Sum_probs=60.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAV   70 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~   70 (81)
                      |||+|+||++++..|++++|||++|+.+.|.+++++++...+.+. .+.|+|++++. .|+++|++|++++
T Consensus       411 Adv~g~pv~~~~~~e~~a~GaA~~a~~~~g~~~~~~~a~~~~~~~-~~~~~P~~~~~~~y~~~~~~~~~~~  480 (481)
T TIGR01312       411 ADIFGTPVDVPEGEEGPALGAAILAAWALGEKDLAALCSEAVVKQ-TESVLPIAENVEAYEELYERYKKLY  480 (481)
T ss_pred             HHHhCCceeecCCCcchHHHHHHHHHHhcCCCCCHHHHHhhccCC-CceECCCHHHHHHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999987764556653 67899999885 7999999999975

D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.

>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism]

Probab=99.43  E-value=2.4e-13  Score=94.03  Aligned_cols=76  Identities=41%  Similarity=0.626  Sum_probs=65.0

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhcc--CCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGV--FKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~--~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      |||+|+||+++...|.+++|||++|+.+.|.  |.+.+++ . +.. ..++|.|+.+...+...|+.|++++++.++|.+
T Consensus       435 ADi~g~pv~~p~~~e~~~~GaA~l~~~a~~~~~~~~~~~~-~-~~~-~~~~~~P~~~~~~~~~ky~~w~~ave~~~~~~~  511 (516)
T KOG2517|consen  435 ADILGLPVVRPQDVEAVALGAAMLAGAASGKWSYSSEEKA-S-LTG-VGKVFRPNIDDKLLDKKYQIWLKAVERQLGYRR  511 (516)
T ss_pred             HHHhCCccccccchhHHHHHHHHHHHhhcCCcchhhHHHH-h-cCC-CcceecCCCCcHHHHHHHHHHHHHHHHHhhHHh
Confidence            7999999999999999999999999999999  4444444 2 344 367999999887889999999999999999965


Q ss_pred             c
Q 036432           79 I   79 (81)
Q Consensus        79 ~   79 (81)
                      +
T Consensus       512 ~  512 (516)
T KOG2517|consen  512 I  512 (516)
T ss_pred             h
Confidence            3

>PRK10640 rhaB rhamnulokinase; Provisional

Probab=99.29  E-value=4.5e-12  Score=87.34  Aligned_cols=68  Identities=19%  Similarity=0.197  Sum_probs=55.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccc--cCceeecCCCHHHHHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAK--TSTTFKPVLNEEGRKKKAESWCRAVE   71 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~--~~~~~~P~~~~~~y~~~y~~~~~~~~   71 (81)
                      |||+|+||.+... |++++|||++|++++|.+++.+++ ..+...  ..++|+|+++ ..+++.|.+|+++++
T Consensus       396 ADvlg~pV~~~~~-ea~alGaa~~a~~a~G~~~~~~~~-~~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~~  465 (471)
T PRK10640        396 ADACGIRVIAGPV-EASTLGNIGIQLMTLDELNNVDDF-RQVVSTNFPLTTFTPNPD-SEIARHVAQFQSLRQ  465 (471)
T ss_pred             HHHhCCCeeeCCh-hHHHHHHHHHHHHHcCCcCCHHHH-HHHHHhcCCceEEcCCCh-HHHHHHHHHHHHHhc
Confidence            7999999988775 899999999999999999998877 666541  1468999987 456778888888765

>PRK10331 L-fuculokinase; Provisional

Probab=99.25  E-value=6.8e-12  Score=86.26  Aligned_cols=60  Identities=27%  Similarity=0.249  Sum_probs=50.2

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKK   61 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~   61 (81)
                      |||||+||++++..|++++|||++|++++|.|++++++...+... .++|+|++....|++
T Consensus       410 Advlg~pV~~~~~~e~~a~GaA~la~~~~G~~~~~~~a~~~~~~~-~~~~~P~~~~~~y~~  469 (470)
T PRK10331        410 ANMLDIPIKVLDDAETTVAGAAMFGWYGVGEFSSPEQARAQMKYQ-YRYFYPQTEPEFIEE  469 (470)
T ss_pred             HHhcCCeeEecCcccchHHHHHHHHHHhcCCCCCHHHHHHHHhhc-ceeECCCccHhhhhc
Confidence            799999999999999999999999999999999987764556553 568999966556653

>COG1069 AraB Ribulose kinase [Energy production and conversion]

Probab=99.08  E-value=2.3e-10  Score=79.47  Aligned_cols=73  Identities=22%  Similarity=0.261  Sum_probs=60.5

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCC-CHH-HHHHHHHHHHHHHHHHh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVL-NEE-GRKKKAESWCRAVERTF   74 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~-~~~-~y~~~y~~~~~~~~~~~   74 (81)
                      ||++|+||+++...+..+||+|++++++.|.+.++..+...|... .....|++ +.. .|+.+|++|+.++.-..
T Consensus       452 aDvtg~~v~i~~s~~a~llGsAm~~avAag~~~dl~~A~~aMs~~-~~~~~~~~~~~~~~y~~lyr~y~~l~~~~~  526 (544)
T COG1069         452 ADVTGRPVVIPASDQAVLLGAAMFAAVAAGVHPDLPAAAQAMSSA-VEKTLPPPPERAARYERLYRRYLQLHDDAE  526 (544)
T ss_pred             HHhcCCeEEeecccchhhhHHHHHHHHHhccCcchHHHHHHhhcc-cceecCChHHHHHHHHHHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999987776777664 44455555 554 79999999998876544

>TIGR02628 fuculo_kin_coli L-fuculokinase

Probab=99.07  E-value=1.6e-10  Score=79.54  Aligned_cols=52  Identities=29%  Similarity=0.324  Sum_probs=45.2

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecC
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPV   53 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~   53 (81)
                      |||||+||++++..|++++|||++|++++|.|++++++...+... .++|+|+
T Consensus       414 Adv~g~pV~~~~~~e~~~lGaA~~a~~a~G~~~~~~~a~~~~~~~-~~~~~P~  465 (465)
T TIGR02628       414 ANMLDIPVKVVDDAETTVAGAAMFGFYGVGEYNSPEEAQAQMHPQ-YRYFYPQ  465 (465)
T ss_pred             hhhcCCeeEeccCCcchHHHHHHHHHHhcCccCCHHHHHHHhhcc-ceeeCCC
Confidence            799999999999999999999999999999999988774555553 5689985

Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.

>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]

Probab=98.94  E-value=2.2e-09  Score=74.69  Aligned_cols=74  Identities=24%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCC-HHHHHhccccccCceeecCCCH-HHHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNE-EGRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~-~~~~~~~~~~~~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~   76 (81)
                      ||++|+||.++...|++++|+|++++.+.+.+.+ .+++ .+.... ..++.|++++ +.|++.|+.|+++|.++...
T Consensus       422 Ad~~g~~v~~~~~~e~~a~g~A~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~p~~~~~~~y~~~~~~~~~~y~~~~~~  497 (502)
T COG1070         422 ADALGLPVVVPEVEEAGALGGAALAAAALGGIYDSAEGA-LKAVVD-ARRIIPDPERAAAYQELYERYRALYQALLAL  497 (502)
T ss_pred             HHHcCCeeEecCcccchHHHHHHHHHHHhCCCCccHHHH-hhcccc-ccccCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999888888888766543 3444 333332 5689999988 48999999999999987754

>TIGR02627 rhamnulo_kin rhamnulokinase

Probab=98.40  E-value=1.8e-07  Score=64.29  Aligned_cols=37  Identities=27%  Similarity=0.310  Sum_probs=33.8

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIF   38 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~   38 (81)
                      |||||+||.+.. .|++++|||++|++++|.+++++++
T Consensus       408 ADvlg~pV~~~~-~e~~a~GaA~~a~~~~G~~~~~~~~  444 (454)
T TIGR02627       408 ADACGIRVIAGP-VEASTLGNIGVQLMALDEINDMAAF  444 (454)
T ss_pred             HHHhCCceEcCC-chHHHHHHHHHHHHhcCCcCCHHHH
Confidence            799999998776 7799999999999999999998776

This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.

>PLN02669 xylulokinase

Probab=98.23  E-value=3.9e-06  Score=59.38  Aligned_cols=75  Identities=13%  Similarity=0.065  Sum_probs=47.6

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccC-----CCHHHHHhccccc--cCcee--ecCC-CH-HHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVF-----KEEEIFASGEWAK--TSTTF--KPVL-NE-EGRKKKAESWCRA   69 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~-----~~~~~~~~~~~~~--~~~~~--~P~~-~~-~~y~~~y~~~~~~   69 (81)
                      |||||+||.+++..|++++|||++|+.+.-..     ..+++........  ....+  .|.+ +. +.|..+..+|.++
T Consensus       466 ADVlg~pV~~~~~~ea~alGAA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~  545 (556)
T PLN02669        466 ASIFGCDVYTVQRPDSASLGAALRAAHGWLCNEQGSFVPISCLYEGKLEATSLSCKLAVKAGDQELLSQYGLLMKKRMEI  545 (556)
T ss_pred             HHHcCCCeEecCCCCchHHHHHHHHHHHHhhhhhcccCChhhhcccccccCcccceeeccCCCccHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999853211     1111111111110  01123  5655 44 4788888888888


Q ss_pred             HHHHhc
Q 036432           70 VERTFN   75 (81)
Q Consensus        70 ~~~~~~   75 (81)
                      -+.++.
T Consensus       546 ~~~~~~  551 (556)
T PLN02669        546 EQQLVE  551 (556)
T ss_pred             HHHHHH
Confidence            776653

>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related

Probab=98.21  E-value=4.7e-07  Score=55.61  Aligned_cols=29  Identities=52%  Similarity=0.871  Sum_probs=27.0

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      ||+||+||.+++..|++++|||++|++++
T Consensus       170 Advl~~~V~~~~~~e~~a~GaA~~A~~a~  198 (198)
T PF02782_consen  170 ADVLGRPVVRPEVEEASALGAALLAAVAV  198 (198)
T ss_dssp             HHHHTSEEEEESSSTHHHHHHHHHHHHHT
T ss_pred             HHHhCCceEeCCCCchHHHHHHHHHHhhC
Confidence            68999999999999999999999999874

These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....

>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]

Probab=96.60  E-value=0.0051  Score=43.18  Aligned_cols=72  Identities=18%  Similarity=0.150  Sum_probs=45.1

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhcc-----CCCHHHHHh--ccccc-cCceeecCCCH-HHHHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGV-----FKEEEIFAS--GEWAK-TSTTFKPVLNE-EGRKKKAESWCRAVE   71 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~-----~~~~~~~~~--~~~~~-~~~~~~P~~~~-~~y~~~y~~~~~~~~   71 (81)
                      |||+|.||.+.+..++++||+|+-|+.+.-.     .-.+.....  +..+. ..-.-+|.+.+ +.|..++++++++-+
T Consensus       463 adVf~apVy~~~~~~sa~lG~A~ra~ya~~~~~~~~~vp~~~~~~~~~~~p~~~~L~~~p~~~~~e~Y~~ll~~~~e~e~  542 (545)
T KOG2531|consen  463 ADVFGAPVYTIEGPNSAALGGAYRAAYALLGDSFGIFVPFSNKTNYLSLTPSKLELACEPDSANWEIYGPLLKRLSELED  542 (545)
T ss_pred             HHHhCCCeEeecCCchhhHHHHHHHHHHHHhccccccccceeeccccccCCccceeeecCCcchHHHHHHHHHHHHHHHH
Confidence            6999999999999999999999998876421     101100000  00000 12235676666 478888888887655


Q ss_pred             H
Q 036432           72 R   72 (81)
Q Consensus        72 ~   72 (81)
                      .
T Consensus       543 ~  543 (545)
T KOG2531|consen  543 T  543 (545)
T ss_pred             h
Confidence            4

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]

Probab=89.00  E-value=0.26  Score=34.02  Aligned_cols=25  Identities=44%  Similarity=0.591  Sum_probs=21.7

Q ss_pred             CcCCCceecCCCCch-hHHHHHHHHH
Q 036432            2 DLLGSPVIRPADKET-TALGAAFADG   26 (81)
Q Consensus         2 Dilg~~v~~~~~~e~-~alGAA~lA~   26 (81)
                      |.+|++|.+|+..+. +|+|||++|.
T Consensus       364 ~~lg~~V~vP~~~ql~GAiGAAL~a~  389 (396)
T COG1924         364 DLLGRKVIVPPYAQLMGAIGAALIAK  389 (396)
T ss_pred             HHhCCeeecCCccchhhHHHHHHHHh
Confidence            678999999998774 9999999874

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15

Probab=87.79  E-value=0.37  Score=33.52  Aligned_cols=24  Identities=42%  Similarity=0.591  Sum_probs=20.7

Q ss_pred             CcCCCceecCCCCc-hhHHHHHHHH
Q 036432            2 DLLGSPVIRPADKE-TTALGAAFAD   25 (81)
Q Consensus         2 Dilg~~v~~~~~~e-~~alGAA~lA   25 (81)
                      +.||.+|.+|+..+ .+|+|||++|
T Consensus       377 ~~Lg~~iivPe~pq~~GAiGAAL~A  401 (404)
T TIGR03286       377 DLLGIEVVVPEYSQYIGAVGAALLA  401 (404)
T ss_pred             HHhCCcEEECCcccHHHHHHHHHHh
Confidence            46899999999888 5999999987

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.

>PF03727 Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P)

Probab=87.75  E-value=0.39  Score=30.89  Aligned_cols=24  Identities=25%  Similarity=0.268  Sum_probs=18.8

Q ss_pred             CceecCCCCchhHHHHHHHHHHhh
Q 036432            6 SPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         6 ~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      .+|......+++.+|||++|+++.
T Consensus       219 ~~v~~~~~~dgsg~GAAi~AA~a~  242 (243)
T PF03727_consen  219 CKVEFVLSEDGSGVGAAIAAAVAC  242 (243)
T ss_dssp             EEEEEEE-SSTHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCchHHHHHHHHHHhc
Confidence            467666678999999999999863

The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF00349 from PFAM. Some members of the family have two copies of each of these domains. This entry represents the more C-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4DHY_A 3ID8_A 4DCH_A 3FGU_A 3QIC_A 3A0I_X 3VEY_A 3IDH_A 3VEV_A 3VF6_A ....

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit

Probab=84.30  E-value=0.77  Score=30.68  Aligned_cols=25  Identities=32%  Similarity=0.426  Sum_probs=18.8

Q ss_pred             CcCCCcee-cCCCCc-hhHHHHHHHHH
Q 036432            2 DLLGSPVI-RPADKE-TTALGAAFADG   26 (81)
Q Consensus         2 Dilg~~v~-~~~~~e-~~alGAA~lA~   26 (81)
                      +.||++|. .|...+ .+|+|||++|.
T Consensus       261 ~~Lg~~v~~~p~~p~~~GAlGAAL~A~  287 (293)
T TIGR03192       261 RILGIKAVDTKIDSQIAGALGAALFGY  287 (293)
T ss_pred             HHhCCCceeCCCCccHHHHHHHHHHHH
Confidence            45788887 555444 69999999985

Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	81
2zf5_O	497	Crystal Structure Of Highly Thermostable Glycerol K		4e-08
4e1j_A	520	Crystal Structure Of Glycerol Kinase In Complex Wit		5e-08
2d4w_A	504	Crystal Structure Of Glycerol Kinase From Cellulomo		3e-07
3g25_A	501	1.9 Angstrom Crystal Structure Of Glycerol Kinase (		6e-07
1r59_O	505	Enterococcus Casseliflavus Glycerol Kinase Length =		8e-06
3h3n_X	506	Glycerol Kinase H232r With Glycerol Length = 506		9e-06
3flc_O	518	Crystal Structure Of The His-Tagged H232r Mutant Of		9e-06
3h45_X	506	Glycerol Kinase H232e With Ethylene Glycol Length =		9e-06
3d7e_O	505	Enterococcus Casseliflavus Glycerol Kinase Mutant H		9e-06
1bu6_O	501	Crystal Structures Of Escherichia Coli Glycerol Kin		1e-05
1gla_G	501	Structure Of The Regulatory Complex Of Escherichia		1e-05
1bwf_Y	501	Escherichia Coli Glycerol Kinase Mutant With Bound		1e-05
1xup_O	487	Enterococcus Casseliflavus Glycerol Kinase Complexe		1e-05
3ezw_A	526	Crystal Structure Of A Hyperactive Escherichia Coli		1e-05
2dpn_A	495	Crystal Structure Of The Glycerol Kinase From Therm		2e-05

>pdb|2ZF5|O Chain O, Crystal Structure Of Highly Thermostable Glycerol Kinase From A Hyperthermophilic Archaeon Length = 497

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   VIRP  KETTALGAA+  GLA+  + +    A  E  K    F+P ++E+ R+
Sbjct: 414 ADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIA--ELWKAERIFEPKMDEKTRE 471
Query: 61  KKAESWCRAVERTFNLADI 79
           +  + W  AV+R    A +
Sbjct: 472 RLYKGWKEAVKRAMGWAKV 490

>pdb|4E1J|A Chain A, Crystal Structure Of Glycerol Kinase In Complex With Glycerol From Sinorhizobium Meliloti 1021 Length = 520

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +DLL +PV RP   ETTALG A+  G   GV+  +E FA   WA+    F+P  +E  RK
Sbjct: 446 SDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFAK-SWAR-DRRFEPHXDEATRK 503
Query: 61  KKAESWCRAVERTF 74
            K + W  AV+RT 
Sbjct: 504 VKLKGWRSAVKRTL 517

>pdb|2D4W|A Chain A, Crystal Structure Of Glycerol Kinase From Cellulomonas Sp. Nt3060 Length = 504

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD LG  V+RP   ETTALGAA+A G+A+G +K E+      WA+    + P +    R+
Sbjct: 424 ADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVID-NWAE-DKRWSPSMESGERE 481
Query: 61  KKAESWCRAVERTFNLAD 78
           +   +W +AV +T    D
Sbjct: 482 RLYRNWKKAVTKTMEWVD 499

>pdb|3G25|A Chain A, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk) From Staphylococcus Aureus In Complex With Glycerol. Length = 501

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD++ + V RP  +ETTALGAAF  GLA+G ++ ++  A   W K    F P  +E  R+
Sbjct: 425 ADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDIAK-NW-KLEEKFDPKXDEGERE 482
Query: 61  KKAESWCRAVERT 73
           K    W +AVE T
Sbjct: 483 KLYRGWKKAVEAT 495

>pdb|1R59|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Length = 505

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 423 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 480
Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 481 NLYEGWKQAVAAT 493

>pdb|3H3N|X Chain X, Glycerol Kinase H232r With Glycerol Length = 506

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 481
Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 482 NLYEGWKQAVAAT 494

>pdb|3FLC|O Chain O, Crystal Structure Of The His-Tagged H232r Mutant Of Glycerol Kinase From Enterococcus Casseliflavus With Glycerol Length = 518

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 436 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 493
Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 494 NLYEGWKQAVAAT 506

>pdb|3H45|X Chain X, Glycerol Kinase H232e With Ethylene Glycol Length = 506

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 481
Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 482 NLYEGWKQAVAAT 494

>pdb|3D7E|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Mutant His232ala Complexed With Glycerol Length = 505

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 423 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 480
Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 481 NLYEGWKQAVAAT 493

>pdb|1BU6|O Chain O, Crystal Structures Of Escherichia Coli Glycerol Kinase And The Mutant A65t In An Inactive Tetramer: Conformational Changes And Implications For Allosteric Regulation Length = 501

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480
Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492

>pdb|1GLA|G Chain G, Structure Of The Regulatory Complex Of Escherichia Coli Iiiglc With Glycerol Kinase Length = 501

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480
Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492

>pdb|1BWF|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp Analog Showing Substantial Domain Motion Length = 501

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480
Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492

>pdb|1XUP|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Complexed With Glycerol Length = 487

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 419 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 476
Query: 61  KKAESWCRAV 70
              E W +AV
Sbjct: 477 NLYEGWKQAV 486

>pdb|3EZW|A Chain A, Crystal Structure Of A Hyperactive Escherichia Coli Glycerol Kinase Mutant Gly230 --> Asp Obtained Using Microfluidic Crystallization Devices Length = 526

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480
Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492

>pdb|2DPN|A Chain A, Crystal Structure Of The Glycerol Kinase From Thermus Thermophilus Hb8 Length = 495

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV  P   ETTALGAA   G+  G    E++  +G + + +  F P + E  R+
Sbjct: 419 ADLLGVPVAVPEVTETTALGAALMAGVGAGALSPEDV--AGRF-REAERFLPTMPEGRRE 475
Query: 61  KKAESWCRAVER 72
                W  AVER
Sbjct: 476 ALYRRWREAVER 487

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	81
2w40_A	503	Glycerol kinase, putative; closed conformation, ma	2e-24
2dpn_A	495	Glycerol kinase; thermus thermophilus HB8, structu	2e-22
2d4w_A	504	Glycerol kinase; alpha and beta protein, ribonucle	4e-22
2p3r_A	510	Glycerol kinase; glycerol metabolism, allosteric r	1e-21
2zf5_O	497	Glycerol kinase; hyperthermophilic archaeon, ATP-b	1e-21
3g25_A	501	Glycerol kinase; IDP00743, ATP-binding, glycerol m	1e-21
4e1j_A	520	Glycerol kinase; structural genomics, PSI-biology,	2e-21
3h3n_X	506	Glycerol kinase; ATP-binding, glycerol metabolism,	4e-21
3ll3_A	504	Gluconate kinase; xylulose kinase, nysgx, ATP, ADP	4e-09
2uyt_A	489	Rhamnulokinase; rhamnose degradation, IN-LINE phos	3e-07
3ifr_A	508	Carbohydrate kinase, FGGY; xylulose kinase, SGX, s	2e-06
3l0q_A	554	Xylulose kinase; xlylulose kinase, SGX, PSI, struc	2e-06
3i8b_A	515	Xylulose kinase; strain ATCC 15703 / DSM 20083, 11	9e-05
3hz6_A	511	Xylulokinase; xylulose, structural genomic, chromo	1e-04
2itm_A	484	Xylulose kinase, xylulokinase; ATPase, FGGY kinase	2e-04

>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Length = 503

 Score = 93.4 bits (233), Expect = 2e-24
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D++ + +     KE T+LGAA   GL + ++   +   S    ++   F   ++++ RK
Sbjct: 428 SDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKS-LLRRSDAVFHSKMDDKKRK 486

Query: 61  KKAESWCRAVERTF 74
           KK   W +AVERT 
Sbjct: 487 KKTSEWNKAVERTL 500

>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Length = 495

 Score = 88.0 bits (219), Expect = 2e-22
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV  P   ETTALGAA   G+  G    E++  +G + + +  F P + E  R+
Sbjct: 419 ADLLGVPVAVPEVTETTALGAALMAGVGAGALSPEDV--AGRF-REAERFLPTMPEGRRE 475

Query: 61  KKAESWCRAVERTFNLAD 78
                W  AVER    A 
Sbjct: 476 ALYRRWREAVERAKGWAR 493

>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Length = 504

 Score = 86.8 bits (216), Expect = 4e-22
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD LG  V+RP   ETTALGAA+A G+A+G +K E+      W      + P +    R+
Sbjct: 424 ADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVID-NW-AEDKRWSPSMESGERE 481

Query: 61  KKAESWCRAVERTFNLAD 78
           +   +W +AV +T    D
Sbjct: 482 RLYRNWKKAVTKTMEWVD 499

>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Length = 497

 Score = 85.7 bits (213), Expect = 1e-21
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   VIRP  KETTALGAA+  GLA+  + +    A   W K    F+P ++E+ R+
Sbjct: 414 ADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAE-LW-KAERIFEPKMDEKTRE 471

Query: 61  KKAESWCRAVERTFNLAD 78
           +  + W  AV+R    A 
Sbjct: 472 RLYKGWKEAVKRAMGWAK 489

>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Length = 501

 Score = 85.7 bits (213), Expect = 1e-21
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD++ + V RP  +ETTALGAAF  GLA+G ++ ++  A   W K    F P ++E  R+
Sbjct: 425 ADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDIAK-NW-KLEEKFDPKMDEGERE 482

Query: 61  KKAESWCRAVERTFNLAD 78
           K    W +AVE T     
Sbjct: 483 KLYRGWKKAVEATQVFKT 500

>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Length = 520

 Score = 85.3 bits (212), Expect = 2e-21
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +DLL +PV RP   ETTALG A+  G   GV+  +E FA   W      F+P ++E  RK
Sbjct: 446 SDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFAK-SW-ARDRRFEPHMDEATRK 503

Query: 61  KKAESWCRAVERTFNLA 77
            K + W  AV+RT   A
Sbjct: 504 VKLKGWRSAVKRTLIAA 520

>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Length = 506

 Score = 84.1 bits (209), Expect = 4e-21
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S    +    F P +  E R 
Sbjct: 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS-MA-EEGQMFTPEMPAEERD 481

Query: 61  KKAESWCRAVERTFN 75
              E W +AV  T  
Sbjct: 482 NLYEGWKQAVAATQT 496

>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Length = 504

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 9/52 (17%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           A++   P++   ++++  L A F    A+G+ ++       ++A+    + P
Sbjct: 414 ANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSEIG--QFAQADKVYFP 463

>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Length = 489

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKE-EEIFASGEWAKTSTTFKPVLNEEGR 59
           AD  G  VI     E + LG      + +      ++           TTF P  N +  
Sbjct: 414 ADACGIRVIAGPV-EASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTP--NPDSE 470

Query: 60  KKKAESWCRAVERTFNLA 77
                +   +  +T  L 
Sbjct: 471 IAHYVALIHSTRQTKELC 488

>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Length = 508

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           AD+L  PV   A+   +A+GAA+   +  G     +        +T     P
Sbjct: 421 ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT--ALVRTGEKITP 470

>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Length = 554

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           A+  G  ++ P + E   LG+A    +A GVF+     A    ++   T  P
Sbjct: 463 ANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPE-AMAAMSRIGKTVTP 513

>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
             +LG  V RPA  E  A+GAA      +    E    A         T +P
Sbjct: 445 PSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPP--AWQLTIDGVETGEP 494

>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Length = 511

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 3/55 (5%)

Query: 1   ADLLGSPVIRPADKET-TALGAAFADGLAIGVFK--EEEIFASGEWAKTSTTFKP 52
           AD L   ++   D       G A    + +      ++ +  +      S    P
Sbjct: 423 ADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPASNILHP 477

>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Length = 484

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 3/53 (5%)

Query: 1   ADLLGSPVIRPADKET-TALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP 52
           AD+ G  +      +   ALGAA    +A    K               +  P
Sbjct: 407 ADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELL--PQLPLEQSHLP 457

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	81
3ezw_A	526	Glycerol kinase; glycerol metabolism, allosteric r	99.82
3g25_A	501	Glycerol kinase; IDP00743, ATP-binding, glycerol m	99.73
2p3r_A	510	Glycerol kinase; glycerol metabolism, allosteric r	99.73
3h3n_X	506	Glycerol kinase; ATP-binding, glycerol metabolism,	99.73
2d4w_A	504	Glycerol kinase; alpha and beta protein, ribonucle	99.72
4e1j_A	520	Glycerol kinase; structural genomics, PSI-biology,	99.69
2zf5_O	497	Glycerol kinase; hyperthermophilic archaeon, ATP-b	99.67
2w40_A	503	Glycerol kinase, putative; closed conformation, ma	99.67
3l0q_A	554	Xylulose kinase; xlylulose kinase, SGX, PSI, struc	99.67
3ifr_A	508	Carbohydrate kinase, FGGY; xylulose kinase, SGX, s	99.65
3ll3_A	504	Gluconate kinase; xylulose kinase, nysgx, ATP, ADP	99.65
2dpn_A	495	Glycerol kinase; thermus thermophilus HB8, structu	99.64
4bc3_A	538	Xylulose kinase; transferase, glucuronate xyluloki	99.64
3hz6_A	511	Xylulokinase; xylulose, structural genomic, chromo	99.61
3jvp_A	572	Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su	99.59
2itm_A	484	Xylulose kinase, xylulokinase; ATPase, FGGY kinase	99.57
2uyt_A	489	Rhamnulokinase; rhamnose degradation, IN-LINE phos	99.04
3i8b_A	515	Xylulose kinase; strain ATCC 15703 / DSM 20083, 11	98.73
3h6e_A	482	Carbohydrate kinase, FGGY; novosphingobium aromati	98.15
1hux_A	270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	95.95
4ehu_A	276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	87.06
3f9m_A	470	Glucokinase; hexokinase IV, ATP-binding, diabetes	81.33

>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*

Probab=99.82  E-value=7.8e-21  Score=130.50  Aligned_cols=78  Identities=31%  Similarity=0.565  Sum_probs=70.0

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhhcc
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADIS   80 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~   80 (81)
                      |||||+||.++...|++|+|||++|++|+|.|++++++ .++... .++|+|++++..|+++|++|+++|+++++|.+.|
T Consensus       423 ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~-~~~~~~-~~~~~P~~~~~~~~~~y~~w~~av~r~~~w~~~~  500 (526)
T 3ezw_A          423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVI-EREFRPGIETTERNYRYAGWKKAVKRAMAWEEHD  500 (526)
T ss_dssp             HHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGS-TTCCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHH-HHhcCC-CeEEcCCCCHHHHHHHHHHHHHHHHHHhCchHHH
Confidence            79999999999999999999999999999999999887 555553 6799999999888889999999999999996543

>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*

Probab=99.73  E-value=2.3e-18  Score=117.68  Aligned_cols=76  Identities=38%  Similarity=0.643  Sum_probs=69.3

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      |||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++..|+++|++|+++|+++++|..
T Consensus       425 Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~  500 (501)
T 3g25_A          425 ADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWKL-EEKFDPKMDEGEREKLYRGWKKAVEATQVFKT  500 (501)
T ss_dssp             HHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCCE-EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhccC-CeEECCCCCHHHHHHHHHHHHHHHHHHhcccc
Confidence            69999999999999999999999999999999999887 666663 67899999988899999999999999999953

>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O

Probab=99.73  E-value=5.6e-18  Score=115.92  Aligned_cols=75  Identities=37%  Similarity=0.539  Sum_probs=69.0

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLA   77 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~   77 (81)
                      |||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++..|+++|++|+++|+++++|.
T Consensus       424 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~  498 (506)
T 3h3n_X          424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEE-GQMFTPEMPAEERDNLYEGWKQAVAATQTFK  498 (506)
T ss_dssp             HHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTTCCC-CCEECCCSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence            69999999999999999999999999999999999887 666664 7799999998889999999999999999984

>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}

Probab=99.72  E-value=7.2e-18  Score=115.28  Aligned_cols=78  Identities=38%  Similarity=0.673  Sum_probs=69.9

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhhcc
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADIS   80 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~   80 (81)
                      |||||+||.++...|++|+|||++|++++|.|++++++ ..+... .++|+|++++..|+++|++|+++|++++.|.+.|
T Consensus       424 Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~  501 (504)
T 2d4w_A          424 ADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDV-IDNWAE-DKRWSPSMESGERERLYRNWKKAVTKTMEWVDED  501 (504)
T ss_dssp             HHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHH-HHHCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHH-HhhcCC-CeEEccCCCHHHHHHHHHHHHHHHHHHhccchhh
Confidence            69999999999999999999999999999999998887 555553 6789999988889999999999999999996655

>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}

Probab=99.69  E-value=2.7e-17  Score=112.93  Aligned_cols=73  Identities=44%  Similarity=0.728  Sum_probs=66.2

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhc
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFN   75 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~   75 (81)
                      |||||+||.++...|++|+|||++|++++|.|++++++ .++... .++|+|++++..|+++|++|+++++++++
T Consensus       446 ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~  518 (520)
T 4e1j_A          446 SDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAF-AKSWAR-DRRFEPHMDEATRKVKLKGWRSAVKRTLI  518 (520)
T ss_dssp             HHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHH-HHTCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHH-HhhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            69999999999999999999999999999999999887 566653 67899999998899999999999999864

>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}

Probab=99.67  E-value=5.4e-17  Score=110.72  Aligned_cols=75  Identities=39%  Similarity=0.667  Sum_probs=67.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLA   77 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~   77 (81)
                      ||+||+||.++...|++|+|||++|++++|.|++++++ ..+... .++|+|+++...|+++|+.|+++|++++.|.
T Consensus       414 Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~-~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~  488 (497)
T 2zf5_O          414 ADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREI-AELWKA-ERIFEPKMDEKTRERLYKGWKEAVKRAMGWA  488 (497)
T ss_dssp             HHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHH-HTTCCE-EEEECCCCCHHHHHHHHHHHHHHHHTTTTGG
T ss_pred             HhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHH-HHhcCC-CeEECCCccHHHHHHHHHHHHHHHHHHHhHh
Confidence            69999999999999999999999999999999999887 566553 6789999988789999999999999999984

>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*

Probab=99.67  E-value=5.9e-17  Score=110.69  Aligned_cols=75  Identities=29%  Similarity=0.460  Sum_probs=66.5

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~   76 (81)
                      ||+||+||.++...|++|+|||++|++++|.|++++++...+.+. .++|+|++++..|+++|++|+++|+++++|
T Consensus       428 Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~  502 (503)
T 2w40_A          428 SDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRS-DAVFHSKMDDKKRKKKTSEWNKAVERTLIQ  502 (503)
T ss_dssp             HHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccCC-CcEEccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            699999999999999999999999999999999988873333543 568999998888999999999999999887

>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*

Probab=99.67  E-value=3.5e-17  Score=112.98  Aligned_cols=76  Identities=18%  Similarity=0.234  Sum_probs=67.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeec-CCCHH-HHHHHHHHHHHHHHHHhchh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP-VLNEE-GRKKKAESWCRAVERTFNLA   77 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P-~~~~~-~y~~~y~~~~~~~~~~~~~~   77 (81)
                      |||||+||.+++..|++|+|||++|++++|.|+++++++..+.+. .++|+| ++++. .|+++|+.|+++|+.+..+.
T Consensus       463 ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~~~-~~~~~P~~~~~~~~Y~~~y~~y~~l~~~~~~~~  540 (554)
T 3l0q_A          463 ANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRI-GKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQ  540 (554)
T ss_dssp             HHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHCCE-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhcCC-CcEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            699999999999999999999999999999999998864667664 678999 99875 89999999999999988763

>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}

Probab=99.65  E-value=9e-17  Score=110.05  Aligned_cols=74  Identities=16%  Similarity=0.106  Sum_probs=66.4

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||.+++..|++|+|||++|++++|.|++++++ .++.+. .++|+|++++. .|+++|++|+++++++...
T Consensus       421 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~  495 (508)
T 3ifr_A          421 ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDV-TALVRT-GEKITPDPAKAEVYDRLYRDFSALYATLHPF  495 (508)
T ss_dssp             HHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGG-GGGSEE-EEEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHH-HhhcCC-CeEECcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999887 566663 67899999874 8999999999999998764

>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*

Probab=99.65  E-value=1.2e-16  Score=109.38  Aligned_cols=74  Identities=15%  Similarity=0.225  Sum_probs=66.7

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++. .|+++|+.|+++|+++..+
T Consensus       414 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~~~  488 (504)
T 3ll3_A          414 ANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSEI-GQFAQA-DKVYFPNPKEAATYQKLFPLYCEIRNALAAS  488 (504)
T ss_dssp             HHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGGG-GGTSCE-EEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHHH-HHhcCC-CeEEccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999998876 777664 67899999875 7999999999999998865

>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}

Probab=99.64  E-value=1.6e-16  Score=108.32  Aligned_cols=75  Identities=40%  Similarity=0.595  Sum_probs=67.0

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD   78 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~   78 (81)
                      ||+||+||.++...|++|+|||++|++++|.| +++++ ..+... .++|+|++++..|+++|++|+++|++++.|.+
T Consensus       419 Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~-~~~~~~-~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~~~  493 (495)
T 2dpn_A          419 ADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDV-AGRFRE-AERFLPTMPEGRREALYRRWREAVERAKGWAR  493 (495)
T ss_dssp             HHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHH-HHHCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             HHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHH-HHhcCC-CeEEccCCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence            69999999999999999999999999999999 98887 555553 66899999888899999999999999999843

>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*

Probab=99.64  E-value=2.4e-16  Score=108.52  Aligned_cols=75  Identities=11%  Similarity=0.057  Sum_probs=66.4

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhcc--CCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGV--FKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~--~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      |||||+||.++...|++|+|||++|++++|.  |++++++...+... .++|+|++++. .|+++|++|++++++++..
T Consensus       455 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~~~-~~~~~P~~~~~~~Y~~~y~~y~~l~~~~~~~  532 (538)
T 4bc3_A          455 ADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAPNP-RLAATPSPGASQVYEALLPQYAKLEQRILSQ  532 (538)
T ss_dssp             HHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSCCC-EEEECCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhcCC-CeeECCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6999999999999999999999999999998  88998874556553 67899999985 7999999999999998765

>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*

Probab=99.61  E-value=4.1e-16  Score=106.86  Aligned_cols=75  Identities=21%  Similarity=0.223  Sum_probs=63.6

Q ss_pred             CCcCCCce-ecCCCCchhHHHHHHHHHHhhccCCCHHHHHhcc---ccccCceeecCCCHH-HHHHHHHHHHHHHHHHhc
Q 036432            1 ADLLGSPV-IRPADKETTALGAAFADGLAIGVFKEEEIFASGE---WAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFN   75 (81)
Q Consensus         1 ADilg~~v-~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~---~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~   75 (81)
                      |||||+|| .++...|++|+|||++|++++|.++++++....+   .+. .++|+|++++. .|+++|++|+++++.+..
T Consensus       423 ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~~~y~~~y~~~~~~~~~l~~  501 (511)
T 3hz6_A          423 ADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPA-SNILHPQPCDEGRRRRKFERFKQCVETLGR  501 (511)
T ss_dssp             HHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC----CCCBCCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCCC-CeEECcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            69999999 9999999999999999999999999996543666   664 67899999875 799999999999998775


Q ss_pred             h
Q 036432           76 L   76 (81)
Q Consensus        76 ~   76 (81)
                      .
T Consensus       502 ~  502 (511)
T 3hz6_A          502 L  502 (511)
T ss_dssp             -
T ss_pred             h
Confidence            4

>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A

Probab=99.57  E-value=1.8e-15  Score=102.88  Aligned_cols=74  Identities=19%  Similarity=0.163  Sum_probs=64.0

Q ss_pred             CCcCCCceecCCCCch-hHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432            1 ADLLGSPVIRPADKET-TALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL   76 (81)
Q Consensus         1 ADilg~~v~~~~~~e~-~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~   76 (81)
                      ||+||+||.+++..|. +|+|||++|++++|.+++++++ ..... ..++|+|++++. .|+++|++|+++++++..+
T Consensus       407 Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~-~~~~~-~~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~  482 (484)
T 2itm_A          407 ADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIEL-LPQLP-LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPL  482 (484)
T ss_dssp             HHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHH-SCCCC-EEEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHH-HHhcC-CCeEECCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6999999999999996 9999999999999999998887 43333 256899999874 7999999999999998765

>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*

Probab=99.04  E-value=7.4e-11  Score=80.24  Aligned_cols=68  Identities=24%  Similarity=0.162  Sum_probs=46.3

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHH---HHhccccccCceeecCCCHH--HHHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEI---FASGEWAKTSTTFKPVLNEE--GRKKKAESWCRAVE   71 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~---~~~~~~~~~~~~~~P~~~~~--~y~~~y~~~~~~~~   71 (81)
                      |||||+||.++. .|++++|||++|+++.+...++++   ++..+..  .++|+|++++.  .|+++|++|+++.+
T Consensus       414 ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~~~~~Y~~~~~~y~~~~~  486 (489)
T 2uyt_A          414 ADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN--LTTFTPNPDSEIAHYVALIHSTRQTKE  486 (489)
T ss_dssp             HHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC--CEEECCCTTSHHHHHHHHTTC------
T ss_pred             HHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC--CeEECCCcchHHHHHHHHHHHhhchhh
Confidence            699999999887 799999998888887765544433   3233332  46899999765  68888888887643

>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}

Probab=98.73  E-value=7.2e-09  Score=71.23  Aligned_cols=52  Identities=25%  Similarity=0.180  Sum_probs=41.5

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNE   56 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~   56 (81)
                      |||||+||.++...|++|+|||++|++++|.+.+..+    +......+|+|.++.
T Consensus       445 ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~----~~~~~~~~~~~~~~~  496 (515)
T 3i8b_A          445 PSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPPA----WQLTIDGVETGEPTE  496 (515)
T ss_dssp             HHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCSSCCC----CCCCEEEEECCCCCH
T ss_pred             HHHhCCceEecCCcccHHHHHHHHHHHHcCCCCChhH----hhhhccccCCCCccH
Confidence            6999999999999999999999999999998866432    221124578888874

>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}

Probab=98.15  E-value=4e-07  Score=62.24  Aligned_cols=59  Identities=15%  Similarity=0.092  Sum_probs=41.6

Q ss_pred             CCc-CCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCC---HHHHHHHHHHHHHHHHH
Q 036432            1 ADL-LGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLN---EEGRKKKAESWCRAVER   72 (81)
Q Consensus         1 ADi-lg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~---~~~y~~~y~~~~~~~~~   72 (81)
                      ||| ||+||.+++..|++|+|||++|+++.-.            . ....+.|...   ...+...++.|++++..
T Consensus       408 ADv~~g~pV~~~~~~e~~alGAA~lA~~a~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  470 (482)
T 3h6e_A          408 ASLRPDCAVYTANAHNDVSFGALRLIDPGLRP------------Q-GELVRIEPLDTGSWADLDTYRNRWQAEVEA  470 (482)
T ss_dssp             HHHSTTSEEEEESSCCCTTGGGHHHHCTTCCC------------S-SCEEECCCCCC----CHHHHHHHHHHHHC-
T ss_pred             hhhcCCCeEEEcCCCchHHHHHHHHhCccccc------------c-cccCcccccccccchHHHHHHHHHHHHhhc
Confidence            699 9999999999999999999999887211            0 1223444443   12466668899988654

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5

Probab=95.95  E-value=0.0015  Score=41.41  Aligned_cols=28  Identities=25%  Similarity=0.197  Sum_probs=24.0

Q ss_pred             CCcCCCceecCCCCc-hhHHHHHHHHHHh
Q 036432            1 ADLLGSPVIRPADKE-TTALGAAFADGLA   28 (81)
Q Consensus         1 ADilg~~v~~~~~~e-~~alGAA~lA~~~   28 (81)
                      +|+||+||.+|+..+ .+|+|||++|...
T Consensus       229 ~~~lg~~v~~p~~~~~~~AlGAAl~A~~~  257 (270)
T 1hux_A          229 EEGLGVEIKTSPLAQYNGALGAALYAYKK  257 (270)
T ss_dssp             HHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred             HHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence            478999999999888 5999999998753

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A

Probab=87.06  E-value=0.27  Score=30.67  Aligned_cols=27  Identities=30%  Similarity=0.223  Sum_probs=20.8

Q ss_pred             CcCCCceecCCC-CchhHHHHHHHHHHh
Q 036432            2 DLLGSPVIRPAD-KETTALGAAFADGLA   28 (81)
Q Consensus         2 Dilg~~v~~~~~-~e~~alGAA~lA~~~   28 (81)
                      +.+|+++.+|.. .+.+|+|||++|.-.
T Consensus       228 ~~~g~~~~~p~~p~~~~A~GAAl~A~~~  255 (276)
T 4ehu_A          228 REINTEIIVPDIPQLTGALGAALYAFDE  255 (276)
T ss_dssp             HHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred             HHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence            357889988885 456999999998643

>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*

Probab=81.33  E-value=0.76  Score=31.61  Aligned_cols=26  Identities=19%  Similarity=0.222  Sum_probs=21.3

Q ss_pred             CCceecCCCCchhHHHHHHHHHHhhc
Q 036432            5 GSPVIRPADKETTALGAAFADGLAIG   30 (81)
Q Consensus         5 g~~v~~~~~~e~~alGAA~lA~~~~G   30 (81)
                      +++|......+++.+|||++|+++..
T Consensus       438 ~~~v~l~~a~DGSg~GAAliAa~a~~  463 (470)
T 3f9m_A          438 SCEITFIESEEGSGRGAALVSAVACK  463 (470)
T ss_dssp             TEEEEEEECSSHHHHHHHHHHHHHTC
T ss_pred             CCeEEEEEcCCCcHHHHHHHHHHHHH
Confidence            45677777889999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	81
d2p3ra2	247	c.55.1.4 (A:254-500) Glycerol kinase {Escherichia	5e-15
d1r59o2	235	c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus	2e-09

>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Length = 235

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glycerol kinase
domain: Glycerol kinase
species: Enterococcus casseliflavus [TaxId: 37734]

 Score = 49.9 bits (118), Expect = 2e-09
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 6   SPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAES 65
             V R A+ ETTALGAA+  GLA+G +K+ +       A+    F P +  E R    E 
Sbjct: 173 IDVQRAANLETTALGAAYLAGLAVGFWKDLDELK--SMAEEGQMFTPEMPAEERDNLYEG 230

Query: 66  WCRAV 70
           W +AV
Sbjct: 231 WKQAV 235

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	81
d2p3ra2	247	Glycerol kinase {Escherichia coli [TaxId: 562]}	99.83
d1r59o2	235	Glycerol kinase {Enterococcus casseliflavus [TaxId	99.65
d1huxa_	259	Hydroxyglutaryl-CoA dehydratase component A {Acida	89.3
d1ig8a2	262	Hexokinase {Baker's yeast (Saccharomyces cerevisia	86.52
d1v4sa2	243	Glucokinase {Human (Homo sapiens) [TaxId: 9606]}	84.93
d1czan2	243	Mammalian type I hexokinase {Human (Homo sapiens)	84.33
d1czan4	243	Mammalian type I hexokinase {Human (Homo sapiens)	83.48

>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glycerol kinase
domain: Glycerol kinase
species: Enterococcus casseliflavus [TaxId: 37734]

Probab=99.65  E-value=1.7e-18  Score=107.71  Aligned_cols=68  Identities=40%  Similarity=0.588  Sum_probs=60.6

Q ss_pred             CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHH
Q 036432            1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAV   70 (81)
Q Consensus         1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~   70 (81)
                      |||+|+||++++..|++++|||++|++++|.|++++++ .++.+. .++|+|+++.+.|+++|++|+++|
T Consensus       168 Advlg~~v~~~~~~e~~alGaA~la~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~Y~~wkkAV  235 (235)
T d1r59o2         168 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEE-GQMFTPEMPAEERDNLYEGWKQAV  235 (235)
T ss_dssp             HHHHSSEEEEESCCCTTTHHHHHHHHHHHTSSSSSTTS-GGGCCE-EEEECCCSTTSSHHHHHTTTTTTC
T ss_pred             hhccceeeeeccccchHHHHHHHHHHHHcCCCCCHHHH-HhccCC-CcEEcCCCCHHHHHHHHHHHHhhC
Confidence            69999999999999999999999999999999988886 666664 678999998777999999998863

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]

Probab=89.30  E-value=0.078  Score=30.63  Aligned_cols=25  Identities=28%  Similarity=0.190  Sum_probs=19.7

Q ss_pred             cCCCceecCCCCc-hhHHHHHHHHHH
Q 036432            3 LLGSPVIRPADKE-TTALGAAFADGL   27 (81)
Q Consensus         3 ilg~~v~~~~~~e-~~alGAA~lA~~   27 (81)
                      .++.+|.+|+..+ ++++|||++|.-
T Consensus       230 ~l~~~i~~~~~~~~agaiGAA~lA~~  255 (259)
T d1huxa_         230 GLGVEIKTSPLAQYNGALGAALYAYK  255 (259)
T ss_dssp             HHCSCEECCGGGGGHHHHHHHHHHHH
T ss_pred             HHCCCEEcCCCccHHHHHHHHHHHHH
Confidence            4678898888554 689999999863

>d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Hexokinase
species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]

Probab=86.52  E-value=0.15  Score=30.89  Aligned_cols=25  Identities=24%  Similarity=0.290  Sum_probs=20.8

Q ss_pred             CCceecCCCCchhHHHHHHHHHHhh
Q 036432            5 GSPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         5 g~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      +++|......+++.+|||++|+++.
T Consensus       224 ~~~v~l~~a~DGSg~GAAl~Aa~a~  248 (262)
T d1ig8a2         224 DYPIKIVPAEDGSGAGAAVIAALAQ  248 (262)
T ss_dssp             GCSEEEEECCCTTTHHHHHHHHHHH
T ss_pred             CceEEEEEccCccHHHHHHHHHHHH
Confidence            4567777788999999999999874

>d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Glucokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.93  E-value=0.22  Score=29.79  Aligned_cols=24  Identities=21%  Similarity=0.250  Sum_probs=19.6

Q ss_pred             CceecCCCCchhHHHHHHHHHHhh
Q 036432            6 SPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         6 ~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      .+|......+++.+|||++|+++.
T Consensus       216 ~~i~l~~~~DgSg~GAAl~Aa~a~  239 (243)
T d1v4sa2         216 CEITFIESEEGSGRGAALVSAVAC  239 (243)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCccHHHHHHHHHHHH
Confidence            456666678999999999999874

>d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Mammalian type I hexokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.33  E-value=0.21  Score=29.80  Aligned_cols=24  Identities=25%  Similarity=0.191  Sum_probs=19.0

Q ss_pred             CceecCCCCchhHHHHHHHHHHhh
Q 036432            6 SPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         6 ~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      .+|......+++.+|||++|+++.
T Consensus       216 ~~v~~~~~~DGSg~GAAl~Aa~a~  239 (243)
T d1czan2         216 SDVRFLLSESGSGKGAAMVTAVAY  239 (243)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCcHHHHHHHHHHHH
Confidence            356555677899999999999874

>d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Mammalian type I hexokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.48  E-value=0.24  Score=29.61  Aligned_cols=24  Identities=17%  Similarity=0.221  Sum_probs=19.0

Q ss_pred             CceecCCCCchhHHHHHHHHHHhh
Q 036432            6 SPVIRPADKETTALGAAFADGLAI   29 (81)
Q Consensus         6 ~~v~~~~~~e~~alGAA~lA~~~~   29 (81)
                      .+|......+++.+|||++|+++.
T Consensus       216 ~~i~l~~~~DGSg~GAAl~Aa~a~  239 (243)
T d1czan4         216 CNVSFLLSEDGSGKGAALITAVGV  239 (243)
T ss_dssp             EEEEEEECSSCSHHHHHHHHHHHH
T ss_pred             CcEEEEEccCccHHHHHHHHHHHH
Confidence            355556677899999999999864