Citrus Sinensis ID: 036447

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
RCGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTSA
cccccccccccccccccccccEEEEccccccEEEEEEEEEEEEEEEccccccccEEEEccEEEEccccccccccccccEEEEEccccccHHHHHHHHHccccEEEEEEccccccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEccccEEEEccccEEEEEccccEEEEEEEEcccccccEEEEEcEEEEEEEEEEEccccEEEEEcccccccccccccccccc
ccccHHHccccccccccccccEEEcccccccccccEEEEEEEEEEccccccccccEEcccEEEEccccHHHccccccccEEEEccccccccHHHHHHHccccccEEEEEcccccccccEEEEcccccccccccccccccEEcccEEcccccccccccccccEEEEEEEEEEEccEEEEccHHHEEEccccccEEEEEccccEEEccHHHHHHHHHHHHHHHccccccccccccccEEcccccccccccccccEEEEEEccccEEEEccccEEEEEccccEEEEEEEEcccccccEEEEEcEEEcccEEEEEcccccEEEccccccccccccccccccc
rcgsaqcnlanakacgggicgagvnnpisntgtsgdiriDVLSiqstnggnpgravtvpNFIFLCGSEFVLQGLANgvvgiaglgrskvALPLQLAAAFSFDrkfaiclspafprtngviifgdgpyvlspnvdvsksltytplfinpvntesgflgdpsveYFIGVKSirvsdkaiplnttllsidsegfggtkistvnpytvLETSIYNALVQAFVNAmpnvtrvapvaplgacfkssdivssrfgpsvppidlvlqnnvswsiiGANSivrvnnndvsclgfvdggvrpmtsivigghqlennllqfdlpssrlgfsnsllfqrtvcdnfnftsa
RCGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLlsidsegfggtKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSllfqrtvcdNFNFTSA
RCGSAQCNLANAKacgggicgagVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTSA
******CNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNF***
RCGSAQCNLA****CGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLS***************PYVLS**VD*SKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPN*****PVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFT**
RCGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTSA
*CGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFN****
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RCGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
P13917427 Basic 7S globulin OS=Glyc no no 0.940 0.744 0.382 9e-53
Q8RVH5433 Basic 7S globulin 2 OS=Gl no no 0.940 0.734 0.361 8e-50
Q9LZL3453 Aspartic proteinase PCS1 no no 0.659 0.492 0.251 1e-09
Q3EBM5447 Probable aspartic proteas no no 0.748 0.565 0.267 5e-05
Q766C2438 Aspartic proteinase nepen N/A no 0.476 0.367 0.247 0.0001
Q9S9K4475 Aspartic proteinase-like no no 0.713 0.507 0.232 0.0002
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.440 0.298 0.217 0.0005
Q766C3437 Aspartic proteinase nepen N/A no 0.538 0.416 0.232 0.0006
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function desciption
 Score =  207 bits (527), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/358 (38%), Positives = 184/358 (51%), Gaps = 40/358 (11%)

Query: 2   CGSAQCNLANAKAC-----------GGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGG 50
           C S QC+ AN   C               CG    NPI+     G++  DVL+I +T G 
Sbjct: 89  CHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGS 148

Query: 51  NP--GRAVTVPNFIFLCGSEFVLQ-GLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAI 107
               G  VTVP F+F C   F++Q GL     G+AGLG + ++LP QLA+ F   R+F  
Sbjct: 149 TQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTT 208

Query: 108 CLSPAFPRTNGVIIFGDGPYVLSP--NVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFI 165
           CLS  +P + G IIFGD P  +    N D+   L +TPL I    T  G       EY +
Sbjct: 209 CLS-RYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTI----TLQG-------EYNV 256

Query: 166 GVKSIRVSDKAI-PLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNV 224
            V SIR++  ++ PLN    +I     GGT IST  P+ VL+ S+Y A  Q F   +P  
Sbjct: 257 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQ 316

Query: 225 TRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQ--NNVSWSIIGANSIVRVNNNDVSC 282
            +V  VAP G CF S+ I       + P +DLV+   N   W I G + +V+     V+C
Sbjct: 317 AQVKSVAPFGLCFNSNKI------NAYPSVDLVMDKPNGPVWRISGEDLMVQAQPG-VTC 369

Query: 283 LGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTV--CDNFNFTSA 338
           LG ++GG++P   I +G  QLE NL+ FDL  SR+GFS S L    V   D FNF +A
Sbjct: 370 LGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFANA 427
Seed storage protein. Has a protein kinase activity. Binds leginsulin.
Glycine max (taxid: 3847)
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
225432542435 PREDICTED: basic 7S globulin-like [Vitis 0.991 0.770 0.622 1e-117
255552241434 basic 7S globulin 2 precursor small subu 0.988 0.769 0.598 1e-114
225436984436 PREDICTED: basic 7S globulin [Vitis vini 0.991 0.768 0.607 1e-113
147857949436 hypothetical protein VITISV_038701 [Viti 0.991 0.768 0.605 1e-113
62362434437 nectarin IV [Nicotiana langsdorffii x Ni 0.991 0.766 0.595 1e-110
255552239433 basic 7S globulin 2 precursor small subu 0.979 0.764 0.609 1e-110
343161843 440 extracellular dermal glycoprotein [Nicot 0.991 0.761 0.592 1e-110
224090425416 predicted protein [Populus trichocarpa] 0.985 0.800 0.617 1e-110
222822564437 xyloglucan-specific endoglucanase inhibi 0.988 0.764 0.592 1e-110
224066523438 predicted protein [Populus trichocarpa] 0.991 0.764 0.606 1e-109
>gi|225432542|ref|XP_002277699.1| PREDICTED: basic 7S globulin-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/350 (62%), Positives = 270/350 (77%), Gaps = 15/350 (4%)

Query: 1   RCGSAQCNLANAKACGG-----------GICGAGVNNPISNTGTSGDIRIDVLSIQSTNG 49
           RCGSAQC+L  +KACG              C    +N ++ T TSG++  D +SIQST+G
Sbjct: 86  RCGSAQCSLTRSKACGECFSGPVKGCNYSTCVLSPDNTVTGTATSGEVGEDAVSIQSTDG 145

Query: 50  GNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICL 109
            NPGR V+V   +F CGS F+L+GLA+ V G+AGLGRS+VALP Q ++AFSF+RKF+ICL
Sbjct: 146 SNPGRVVSVRRLLFTCGSTFLLEGLASRVKGMAGLGRSRVALPSQFSSAFSFNRKFSICL 205

Query: 110 SPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESG-FLGDPSVEYFIGVK 168
           S +  ++ GV+ FGDGPYVL P VD S+SLTYTPL  NPV+T S  F G+ SVEYFIGVK
Sbjct: 206 SSS-TKSTGVVFFGDGPYVLLPKVDASQSLTYTPLITNPVSTASAYFQGEASVEYFIGVK 264

Query: 169 SIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRVA 228
           SI+++ KA+PLN TLLSIDS+G+GGTKISTV+PYTVLETSIY A+ QAF+  +  +TRVA
Sbjct: 265 SIKINGKAVPLNATLLSIDSQGYGGTKISTVHPYTVLETSIYKAVTQAFLKELSTITRVA 324

Query: 229 PVAPLGACFKSSDIVSSRFGPSVPPIDLVLQ-NNVSWSIIGANSIVRVNNNDVSCLGFVD 287
            V+P GACF S DI S+R GP+VPPIDLVLQ  +V W + GANS+V+V++N V CLGFVD
Sbjct: 325 SVSPFGACFSSKDIGSTRVGPAVPPIDLVLQRQSVYWRVFGANSMVQVSDN-VLCLGFVD 383

Query: 288 GGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTS 337
           GGV P TSIVIGG QLE+NLLQFDL +SRLGFS+SLL ++T C NFNFTS
Sbjct: 384 GGVNPRTSIVIGGRQLEDNLLQFDLATSRLGFSSSLLSRQTTCSNFNFTS 433

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255552241|ref|XP_002517165.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] gi|223543800|gb|EEF45328.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225436984|ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera] Back     alignment and taxonomy information
>gi|147857949|emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera] Back     alignment and taxonomy information
>gi|62362434|gb|AAX81588.1| nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] Back     alignment and taxonomy information
>gi|255552239|ref|XP_002517164.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] gi|223543799|gb|EEF45327.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|343161843|dbj|BAK57511.1| extracellular dermal glycoprotein [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|224090425|ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|222854960|gb|EEE92507.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|222822564|gb|ACM68431.1| xyloglucan-specific endoglucanase inhibitor protein [Capsicum annuum] Back     alignment and taxonomy information
>gi|224066523|ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|222843848|gb|EEE81395.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2014475433 AT1G03220 [Arabidopsis thalian 0.908 0.709 0.562 3.2e-88
TAIR|locus:2014465434 AT1G03230 [Arabidopsis thalian 0.908 0.707 0.547 1.7e-84
TAIR|locus:2179614391 AT5G19100 [Arabidopsis thalian 0.390 0.337 0.514 5.2e-43
TAIR|locus:2166061406 AT5G48430 [Arabidopsis thalian 0.914 0.761 0.338 1.8e-39
TAIR|locus:2182182405 AT5G19110 [Arabidopsis thalian 0.920 0.767 0.354 2.6e-38
TAIR|locus:2182187386 AT5G19120 [Arabidopsis thalian 0.443 0.388 0.431 7.8e-23
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.784 0.502 0.272 2.2e-16
TAIR|locus:2079919469 AT3G52500 [Arabidopsis thalian 0.724 0.522 0.286 5.5e-15
TAIR|locus:2043245442 AT2G39710 [Arabidopsis thalian 0.742 0.567 0.244 4.7e-12
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.769 0.485 0.242 2.7e-11
TAIR|locus:2014475 AT1G03220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 179/318 (56%), Positives = 231/318 (72%)

Query:    25 NNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGL 84
             +N ++ T TSG+  +DV+SIQSTNG NPGR V +PN IF CG+ F+L+GLA G VG+AG+
Sbjct:   120 DNTVTGTATSGEFALDVVSIQSTNGSNPGRVVKIPNLIFDCGATFLLKGLAKGTVGMAGM 179

Query:    85 GRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPL 144
             GR  + LP Q AAAFSF RKFA+CL+       GV  FG+GPYV  P + +S SL  TPL
Sbjct:   180 GRHNIGLPSQFAAAFSFHRKFAVCLTSG----KGVAFFGNGPYVFLPGIQIS-SLQTTPL 234

Query:   145 FINPVNTESGFL-GDPSVEYFIGVKSIRVSDKAIPLNTTLLSID-SEGFGGTKISTVNPY 202
              INPV+T S F  G+ S EYFIGV +I++ +K +P+N TLL I+ S G GGTKIS+VNPY
Sbjct:   235 LINPVSTASAFSQGEKSSEYFIGVTAIQIVEKTVPINPTLLKINASTGIGGTKISSVNPY 294

Query:   203 TVLETSIYNALVQAFVN--AMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQN 260
             TVLE+SIYNA    FV   A  ++ RVA V P GACF + ++  +R G +VP I+LVL +
Sbjct:   295 TVLESSIYNAFTSEFVKQAAARSIKRVASVKPFGACFSTKNVGVTRLGYAVPEIELVLHS 354

Query:   261 -NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGF 319
              +V W I GANS+V V++ DV CLGFVDGGV   TS+VIGG QLE+NL++FDL S++ GF
Sbjct:   355 KDVVWRIFGANSMVSVSD-DVICLGFVDGGVNARTSVVIGGFQLEDNLIEFDLASNKFGF 413

Query:   320 SNSLLFQRTVCDNFNFTS 337
             S++LL ++T C NFNFTS
Sbjct:   414 SSTLLGRQTNCANFNFTS 431
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2014465 AT1G03230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179614 AT5G19100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166061 AT5G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182182 AT5G19110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182187 AT5G19120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079919 AT3G52500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043245 AT2G39710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-123
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-26
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 3e-25
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-15
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-08
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 3e-04
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
 Score =  357 bits (918), Expect = e-123
 Identities = 161/338 (47%), Positives = 205/338 (60%), Gaps = 27/338 (7%)

Query: 1   RCGSAQCNLANAKA------------CGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTN 48
            C S+ C+LAN               CG   C A   NP++    +GD+  DVLS  +T+
Sbjct: 37  PCSSSVCSLANRYHCPGTCGGAPGPGCGNNTCTAHPYNPVTGECATGDLTQDVLSANTTD 96

Query: 49  GGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAIC 108
           G NP   V + NF+F C    +L+GL  G  G+AGLGRS ++LP QLA+AF   RKFA+C
Sbjct: 97  GSNPL-LVVIFNFVFSCAPSLLLKGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALC 155

Query: 109 LSPAFPRTNGVIIFGDGPYVL-SPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGV 167
           L  + P   GV IFG GPY L  P +D+SKSL+YTPL  NP           S EY+IGV
Sbjct: 156 LPSS-PGGPGVAIFGGGPYYLFPPPIDLSKSLSYTPLLTNPRK---------SGEYYIGV 205

Query: 168 KSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTRV 227
            SI V+  A+PLN TL + D  G GG K+STV PYTVL + IY A  QAF  A   + RV
Sbjct: 206 TSIAVNGHAVPLNPTLSANDRLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPRV 265

Query: 228 -APVAPLGACFKSSDIVSSRFGPSVPPIDLVLQNN-VSWSIIGANSIVRVNNNDVSCLGF 285
            A       C+ +S + ++R G +VP IDLVL    V+W+I GANS+V+V    V+CL F
Sbjct: 266 PAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVNWTIFGANSMVQV-KGGVACLAF 324

Query: 286 VDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSL 323
           VDGG  P  ++VIGGHQ+E+NLL FDL  SRLGFS+SL
Sbjct: 325 VDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSSL 362

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.97
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.81
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 98.57
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 92.56
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 91.21
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 90.76
PF1365090 Asp_protease_2: Aspartyl protease 88.87
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 87.19
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 86.73
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 84.43
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 84.19
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 81.59
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
Probab=100.00  E-value=1.7e-53  Score=405.97  Aligned_cols=310  Identities=51%  Similarity=0.863  Sum_probs=240.9

Q ss_pred             CCCccccCcCCCC------------CCCCCCcceeee-cCCCCceeEEEEEEEEEEeeccCCCCCCceeeeCcEEEeecc
Q 036447            1 RCGSAQCNLANAK------------ACGGGICGAGVN-NPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGS   67 (338)
Q Consensus         1 ~C~s~~C~~~~~~------------~C~~~~C~~~i~-Y~~dg~~~~G~~~~D~v~l~~~~g~~~~~~~~i~~~~fgc~~   67 (338)
                      +|+++.|+.++.+            .|.++.|.|... |+ +|+.++|++++|+|+|+..++.... .++++++.|||++
T Consensus        37 ~C~s~~C~~~~~~~~~~~~~~~~~~~c~~~~C~y~~~~y~-~gs~t~G~l~~Dtl~~~~~~g~~~~-~~~~~~~~FGC~~  114 (362)
T cd05489          37 PCSSSVCSLANRYHCPGTCGGAPGPGCGNNTCTAHPYNPV-TGECATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAP  114 (362)
T ss_pred             CcCChhhccccccCCCccccCCCCCCCCCCcCeeEccccc-cCcEeeEEEEEEEEEecccCCCCcc-cceeCCEEEEcCC
Confidence            6999999876532            577788999766 76 8999999999999999875432111 1368899999998


Q ss_pred             cccccCCCCCcceEEecCCCCCchHHHHhhhcCCCceeEEecCCCCCCCceeEEECCCCCcCCC-CcCCCCCeeeecccc
Q 036447           68 EFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSP-NVDVSKSLTYTPLFI  146 (338)
Q Consensus        68 ~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~~~i~~~FS~cl~~~~~~~~G~l~fGg~d~~~~p-~~~~~~~~~~~pl~~  146 (338)
                      .+.+.+.....+||||||++++|+++||..++..+++|||||++.. ...|+|+||+.+..+.+ ..+.++.+.||||+.
T Consensus       115 ~~~~~~~~~~~dGIlGLg~~~lSl~sql~~~~~~~~~FS~CL~~~~-~~~g~l~fG~~~~~~~~~~~~~~~~~~~tPl~~  193 (362)
T cd05489         115 SLLLKGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALCLPSSP-GGPGVAIFGGGPYYLFPPPIDLSKSLSYTPLLT  193 (362)
T ss_pred             cccccCCccccccccccCCCccchHHHhhhhcCCCcceEEEeCCCC-CCCeeEEECCCchhcccccccccCCcccccccc
Confidence            8643344456899999999999999999887666789999998753 45899999998842100 001247899999997


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEEEEEcCeEeecCCcccccccCCCCcEEEeCCccceecchHHHHHHHHHHHHhCCCCcc
Q 036447          147 NPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNVTR  226 (338)
Q Consensus       147 ~~~~~~~~~~~~~~~~y~i~l~~i~v~~~~i~~~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~y~~l~~~i~~~~~~~~~  226 (338)
                      ++.         ...+|.|+|++|+||++.+.+++..+.....+.+++||||||++|+||+++|++|+++|.+++....+
T Consensus       194 ~~~---------~~~~Y~v~l~~IsVg~~~l~~~~~~~~~~~~~~~g~iiDSGTs~t~lp~~~y~~l~~a~~~~~~~~~~  264 (362)
T cd05489         194 NPR---------KSGEYYIGVTSIAVNGHAVPLNPTLSANDRLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPR  264 (362)
T ss_pred             CCC---------CCCceEEEEEEEEECCEECCCCchhccccccCCCcEEEecCCceEEECHHHHHHHHHHHHHHhcccCc
Confidence            642         24789999999999999998866554433345678999999999999999999999999998864332


Q ss_pred             cCCC-CCCcccccccccccCCCCCCcCcEEEEEcC-CeEEEEecCCeEEEEcCCCeEEEEEEeCCCCCCCceEEccccee
Q 036447          227 VAPV-APLGACFKSSDIVSSRFGPSVPPIDLVLQN-NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLE  304 (338)
Q Consensus       227 ~~~~-~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g-g~~~~i~~~~yl~~~~~~~~~Cl~~~~~~~~~~~~~ILG~~fl~  304 (338)
                      .... ...+.||+............+|+|+|+|+| |++|+|+|++|++++ .++.+|++|...+....+.||||+.|||
T Consensus       265 ~~~~~~~~~~C~~~~~~~~~~~~~~~P~it~~f~g~g~~~~l~~~ny~~~~-~~~~~Cl~f~~~~~~~~~~~IlG~~~~~  343 (362)
T cd05489         265 VPAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVNWTIFGANSMVQV-KGGVACLAFVDGGSEPRPAVVIGGHQME  343 (362)
T ss_pred             CCCCCCCcCccccCCCcCCcccccccceEEEEEeCCCeEEEEcCCceEEEc-CCCcEEEEEeeCCCCCCceEEEeeheec
Confidence            2221 113699986532211223579999999997 799999999999987 5568999998765422457999999999


Q ss_pred             ceEEEEeCCCCeEEEEecc
Q 036447          305 NNLLQFDLPSSRLGFSNSL  323 (338)
Q Consensus       305 ~~~vvfD~~~~rIGfa~~~  323 (338)
                      ++||+||++++|||||+++
T Consensus       344 ~~~vvyD~~~~riGfa~~~  362 (362)
T cd05489         344 DNLLVFDLEKSRLGFSSSL  362 (362)
T ss_pred             ceEEEEECCCCEeecccCC
Confidence            9999999999999999764

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3vla_A413 Crystal Structure Of Edgp Length = 413 1e-103
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 1e-103
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 6e-51
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 1e-32
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 3e-31
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 1e-27
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/318 (61%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 25  NNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGL 84
            NP+ NT T G++  DV+S++ST+G + GR VTVP FIF C    +LQ LA+GVVG+AGL
Sbjct: 98  ENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGL 157
Query: 85  GRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVS-KSLTYTP 143
           GR+++ALP Q A+AFSF RKFA+CLS +   +N VIIFG+ PY   PN+ VS K+LTYTP
Sbjct: 158 GRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTP 216
Query: 144 LFINPVNTE-SGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPY 202
           L  NPV+T  +   G+PSVEYFIGVKSI+++ K + LNT+LLSI S G GGTKIST+NPY
Sbjct: 217 LLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPY 276
Query: 203 TVLETSIYNALVQAFV--NAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQN 260
           TVLETSIY A+ +AF+  +A  N+TRVA VAP GACF + +I+S+R GPSVP IDLVLQ+
Sbjct: 277 TVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQS 336
Query: 261 -NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGF 319
            +V W+I G+NS+V +N+N V CLG VDGG    TSIVIGGHQLE+NL+QFDL +SR+GF
Sbjct: 337 ESVVWTITGSNSMVYINDN-VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395
Query: 320 SNSLLFQRTVCDNFNFTS 337
           S +LL  RT C NFNFTS
Sbjct: 396 SGTLLGSRTTCANFNFTS 413
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 7e-78
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-63
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 2e-61
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  243 bits (620), Expect = 7e-78
 Identities = 196/341 (57%), Positives = 245/341 (71%), Gaps = 7/341 (2%)

Query: 2   CGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNF 61
                C       C    CG    NP+ NT T G++  DV+S++ST+G + GR VTVP F
Sbjct: 75  IACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134

Query: 62  IFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVII 121
           IF C    +LQ LA+GVVG+AGLGR+++ALP Q A+AFSF RKFA+CLS     +N VII
Sbjct: 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSG-STSSNSVII 193

Query: 122 FGDGPYVLSPNVDV-SKSLTYTPLFINPVNTESGFL-GDPSVEYFIGVKSIRVSDKAIPL 179
           FG+ PY   PN+ V  K+LTYTPL  NPV+T +    G+PSVEYFIGVKSI+++ K + L
Sbjct: 194 FGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVAL 253

Query: 180 NTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAM--PNVTRVAPVAPLGACF 237
           NT+LLSI S G GGTKIST+NPYTVLETSIY A+ +AF+      N+TRVA VAP GACF
Sbjct: 254 NTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACF 313

Query: 238 KSSDIVSSRFGPSVPPIDLVLQ-NNVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSI 296
            + +I+S+R GPSVP IDLVLQ  +V W+I G+NS+V + N++V CLG VDGG    TSI
Sbjct: 314 STDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI-NDNVVCLGVVDGGSNLRTSI 372

Query: 297 VIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTS 337
           VIGGHQLE+NL+QFDL +SR+GFS +LL  RT C NFNFTS
Sbjct: 373 VIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS 413
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.95
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.64
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 96.76
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.5e-60  Score=461.61  Aligned_cols=335  Identities=60%  Similarity=1.022  Sum_probs=268.6

Q ss_pred             CCCccccCcCCCC-----------CCCCCCcceeeecCCCCceeEEEEEEEEEEeeccCCCCCCceeeeCcEEEeecccc
Q 036447            1 RCGSAQCNLANAK-----------ACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEF   69 (338)
Q Consensus         1 ~C~s~~C~~~~~~-----------~C~~~~C~~~i~Y~~dg~~~~G~~~~D~v~l~~~~g~~~~~~~~i~~~~fgc~~~~   69 (338)
                      +|.++.|...+.+           .|.++.|.|.+.|+.|++.+.|++++|+|+|+..+|..+...++++++.|||++.+
T Consensus        63 ~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~  142 (413)
T 3vla_A           63 RCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTS  142 (413)
T ss_dssp             BTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGG
T ss_pred             CCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccc
Confidence            5899999877644           34567899999994389999999999999999765543333468889999999987


Q ss_pred             cccCCCCCcceEEecCCCCCchHHHHhhhcCCCceeEEecCCCCCCCceeEEECCCCCcCCCCcCCCCC-eeeeccccCC
Q 036447           70 VLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKS-LTYTPLFINP  148 (338)
Q Consensus        70 ~~~~~~~~~~GIlGLg~~~~s~~~ql~~~~~i~~~FS~cl~~~~~~~~G~l~fGg~d~~~~p~~~~~~~-~~~~pl~~~~  148 (338)
                      .+.+++...+||||||++++|+++||..++.++++|||||++.. +.+|+|+||+.|....|..++++. +.||||++++
T Consensus       143 ~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~-~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~  221 (413)
T 3vla_A          143 LLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGST-SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNP  221 (413)
T ss_dssp             GGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCS-SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCS
T ss_pred             cccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCC-CCceEEEECCCcccccccccccCCceeEeecccCC
Confidence            44455667999999999999999999998878899999999842 568999999998533343346788 9999999875


Q ss_pred             CCCCC-CCCCCCCcceEEEEEEEEEcCeEeecCCcccccccCCCCcEEEeCCccceecchHHHHHHHHHHHHhCC--CCc
Q 036447          149 VNTES-GFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMP--NVT  225 (338)
Q Consensus       149 ~~~~~-~~~~~~~~~y~i~l~~i~v~~~~i~~~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~y~~l~~~i~~~~~--~~~  225 (338)
                      ..++. .++++...+|.|+|++|+||++.+.++...+..++.|++++||||||++++||+++|++|+++|.+++.  +++
T Consensus       222 ~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~  301 (413)
T 3vla_A          222 VSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNIT  301 (413)
T ss_dssp             SCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCC
Confidence            31100 111122379999999999999999988777776655678999999999999999999999999998864  344


Q ss_pred             ccCCCCCCcccccccccccCCCCCCcCcEEEEEcC-CeEEEEecCCeEEEEcCCCeEEEEEEeCCCCCCCceEEccccee
Q 036447          226 RVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQN-NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLE  304 (338)
Q Consensus       226 ~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g-g~~~~i~~~~yl~~~~~~~~~Cl~~~~~~~~~~~~~ILG~~fl~  304 (338)
                      +..+...+..||+.+....++....+|+|+|+|+| ++.|+|+|++|+++. .++..|++++..+....+.||||++|||
T Consensus       302 ~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~-~~~~~Cl~~~~~~~~~~~~~IlGd~fl~  380 (413)
T 3vla_A          302 RVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI-NDNVVCLGVVDGGSNLRTSIVIGGHQLE  380 (413)
T ss_dssp             EECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEE-ETTEEEECEEEEESSCSSSEEECHHHHT
T ss_pred             cCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEe-CCCcEEEEEEecCCCcccceeEehhhhc
Confidence            44434456899987643211122479999999987 589999999999987 4578999988755322368999999999


Q ss_pred             ceEEEEeCCCCeEEEEeccCccccCCCCccCcC
Q 036447          305 NNLLQFDLPSSRLGFSNSLLFQRTVCDNFNFTS  337 (338)
Q Consensus       305 ~~~vvfD~~~~rIGfa~~~~~~~~~C~~~~~~~  337 (338)
                      ++|+|||++++|||||+++..+.+.|++|+|++
T Consensus       381 ~~~vvfD~~~~riGfa~~~~~~~~~c~~~~~~~  413 (413)
T 3vla_A          381 DNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS  413 (413)
T ss_dssp             TEEEEEETTTTEEEEEEEGGGGTCCGGGSBCCC
T ss_pred             CeEEEEECCCCEEEEEEecccCcccccCcCCCC
Confidence            999999999999999999999999999999986
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 5e-35
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 4e-07
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 4e-05
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-04
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 0.004
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 0.004
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  129 bits (324), Expect = 5e-35
 Identities = 95/346 (27%), Positives = 143/346 (41%), Gaps = 42/346 (12%)

Query: 1   RCGSAQCNLANAKACGGGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPN 60
            C +  C            C A   NP+S    +G +        +T+G  P   V V  
Sbjct: 65  GCPAPSCGSDKHDKP----CTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNV-G 119

Query: 61  FIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVI 120
            +  C    +L  L  G  G+AGL  S +ALP Q+A+A     +F +CL    P    + 
Sbjct: 120 VLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGV-AIF 178

Query: 121 IFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLN 180
             G       P    ++S+ YTPL               S  ++I  +SI V D  +P+ 
Sbjct: 179 GGGP-----VPWPQFTQSMPYTPLVTKG----------GSPAHYISARSIVVGDTRVPVP 223

Query: 181 TTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAM--------PNVTRVAPVAP 232
                  +   GG  +ST  PY +L   +Y  L+ AF  A+        P    V  VAP
Sbjct: 224 EG-----ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAP 278

Query: 233 LGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFV-----D 287
            G C+ +  + ++  G +VP + L L     W++ G NS+V V      C+ FV      
Sbjct: 279 FGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTA-CVAFVEMKGVA 337

Query: 288 GGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTVCDNF 333
            G     ++++GG Q+E+ +L FD+   RLGFS    F  T C   
Sbjct: 338 AGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHF--TGCGGL 381
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.97
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=100.00  E-value=1.1e-41  Score=323.11  Aligned_cols=290  Identities=29%  Similarity=0.508  Sum_probs=220.9

Q ss_pred             CCCcceeeecCCCCceeEEEEEEEEEEeeccCCCCCCceeeeCcEEEeecccccccCCCCCcceEEecCCCCCchHHHHh
Q 036447           17 GGICGAGVNNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLGRSKVALPLQLA   96 (338)
Q Consensus        17 ~~~C~~~i~Y~~dg~~~~G~~~~D~v~l~~~~g~~~~~~~~i~~~~fgc~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~   96 (338)
                      ...|.|.+.|+ +|+.+.|.+++|+|++++.....+...+ ..++.++|.......+.....+||+|||+...++++|+.
T Consensus        78 ~~~~~~~~~Y~-~Gs~~~G~~~~D~v~ig~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~  155 (381)
T d1t6ex_          78 KPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGSKPVSKV-NVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVA  155 (381)
T ss_dssp             CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSSSEEEEE-EEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHH
T ss_pred             CCCceeEEEeC-CCCEEEEEEEEEEEEecccccccceeeE-EeeeeeeccccccccccccCcceeeecCCCCcchHHHHh
Confidence            45678999997 9999999999999999986433211111 224677777666433445678999999999999999999


Q ss_pred             hhcCCCceeEEecCCCCCCCceeEEECCCCCcCCCCcCCCCCeeeeccccCCCCCCCCCCCCCCcceEEEEEEEEEcCeE
Q 036447           97 AAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFIGVKSIRVSDKA  176 (338)
Q Consensus        97 ~~~~i~~~FS~cl~~~~~~~~G~l~fGg~d~~~~p~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~y~i~l~~i~v~~~~  176 (338)
                      ....++++|++||.+.. ...+.+.+|+++.     .++.+++.|+|++.+.          ...+|.|.+.+|.++++.
T Consensus       156 ~~~~~~~~fsl~l~~~~-~~~~~~~~g~~~~-----~~~~g~~~~~pi~~~~----------~~~~~~v~l~~i~v~~~~  219 (381)
T d1t6ex_         156 SAQKVANRFLLCLPTGG-PGVAIFGGGPVPW-----PQFTQSMPYTPLVTKG----------GSPAHYISARSIVVGDTR  219 (381)
T ss_dssp             HHHTCCSEEEEECCSSS-CEEEEESCCSCSC-----HHHHTTCCEEECBCCT----------TCCSCEECEEEEEETTEE
T ss_pred             hhcCcceEEEeecCCCc-ccceEeecccccc-----cccCCceEEEeeeccC----------CCceeEEEEEEEeeCCee
Confidence            88888899999998753 3445666666663     4678999999998764          246899999999999998


Q ss_pred             eecCCcccccccCCCCcEEEeCCccceecchHHHHHHHHHHHHhCCC--------CcccCCCCCCcccccccccccCCCC
Q 036447          177 IPLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPN--------VTRVAPVAPLGACFKSSDIVSSRFG  248 (338)
Q Consensus       177 i~~~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~y~~l~~~i~~~~~~--------~~~~~~~~~~~~C~~~~~~~~~~~~  248 (338)
                      +.++...     .....+|+||||++++||+++|++|.+++.+.+..        .........+..||+..........
T Consensus       220 ~~~~~~~-----~~~~~~i~DTGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (381)
T d1t6ex_         220 VPVPEGA-----LATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGG  294 (381)
T ss_dssp             CCCCTTC-----SCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTE
T ss_pred             eccCccc-----ccCcceEEecCCceEECCHHHHHHHHHHHHHHhcccccccccccccccccCCcceeeccccccccccc
Confidence            8764332     22467999999999999999999999999876431        0111223456788887654322223


Q ss_pred             CCcCcEEEEEcCCeEEEEecCCeEEEEcCCCeEEEEEEeCCC-----CCCCceEEcccceeceEEEEeCCCCeEEEEecc
Q 036447          249 PSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGGV-----RPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSL  323 (338)
Q Consensus       249 ~~~P~i~f~f~gg~~~~i~~~~yl~~~~~~~~~Cl~~~~~~~-----~~~~~~ILG~~fl~~~~vvfD~~~~rIGfa~~~  323 (338)
                      ..+|+|+|+|.+++.++|+|++|++.. ..+..|+++.....     ...+.||||++|||++|+|||++++|||||+..
T Consensus       295 ~~~P~i~~~f~~~~~~~i~~~~y~~~~-~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~  373 (381)
T d1t6ex_         295 YAVPNVQLGLDGGSDWTMTGKNSMVDV-KQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP  373 (381)
T ss_dssp             ECCCCEEEEETTSCEEEECHHHHEEEE-ETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred             cccccEEEEEcCCcEEEEChhHeEEEe-CCCcEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEECC
Confidence            578999999988899999999999887 56789998765322     123579999999999999999999999999855


Q ss_pred             CccccCCCC
Q 036447          324 LFQRTVCDN  332 (338)
Q Consensus       324 ~~~~~~C~~  332 (338)
                      .  .++|..
T Consensus       374 ~--~~~~~~  380 (381)
T d1t6ex_         374 H--FTGCGG  380 (381)
T ss_dssp             T--TCCSCC
T ss_pred             C--CCCCcC
Confidence            4  567764
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure