Citrus Sinensis ID: 036528
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 172 | ||||||
| 224136514 | 180 | predicted protein [Populus trichocarpa] | 0.947 | 0.905 | 0.693 | 6e-63 | |
| 255571103 | 176 | Pectinesterase inhibitor, putative [Rici | 0.936 | 0.914 | 0.679 | 1e-57 | |
| 357513037 | 189 | Pectinesterase inhibitor [Medicago trunc | 0.965 | 0.878 | 0.571 | 9e-53 | |
| 351723377 | 187 | uncharacterized protein LOC100306248 pre | 0.994 | 0.914 | 0.557 | 3e-51 | |
| 112383518 | 185 | invertase inhibitor [Coffea canephora] | 1.0 | 0.929 | 0.537 | 3e-49 | |
| 1616628 | 183 | sts15 [Solanum tuberosum] | 0.941 | 0.885 | 0.549 | 6e-47 | |
| 449454568 | 188 | PREDICTED: putative invertase inhibitor- | 0.994 | 0.909 | 0.517 | 2e-46 | |
| 449533361 | 188 | PREDICTED: putative invertase inhibitor- | 0.994 | 0.909 | 0.517 | 3e-46 | |
| 449454566 | 193 | PREDICTED: putative invertase inhibitor- | 0.988 | 0.880 | 0.502 | 2e-43 | |
| 307136270 | 178 | invertase inhibitor [Cucumis melo subsp. | 0.889 | 0.859 | 0.528 | 2e-41 |
| >gi|224136514|ref|XP_002326879.1| predicted protein [Populus trichocarpa] gi|222835194|gb|EEE73629.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 137/163 (84%)
Query: 9 CSFHGITGHNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANLGELGMISMKLTREN 68
C+FH N++ ETCKKCA NDPN+S+NFCVTSLQA +SQC NL LGM+S+KL + N
Sbjct: 18 CTFHANIAQNLIPETCKKCAANDPNLSYNFCVTSLQASNRSQCDNLRGLGMMSIKLIKYN 77
Query: 69 VTKTRSYIKDLLKKKKLDPFMRACLHDCFDLYSDAVPTLKQAMKDYKAKQYEDANIGVSS 128
VT TR Y+K+LLK KK+DPF+RACL+DC DLYSDA+PTLKQAM DYK+K Y+DANI VSS
Sbjct: 78 VTNTRHYVKNLLKNKKMDPFIRACLNDCLDLYSDAIPTLKQAMIDYKSKHYKDANIEVSS 137
Query: 129 VVDACTTCEDGFKENQGAVSPLTKRNYDAFQLSVISLSIINML 171
V+DA TTCEDGF++ +GAVSPLTKRN D FQLS I+L++INML
Sbjct: 138 VIDAATTCEDGFEDKEGAVSPLTKRNNDTFQLSAIALALINML 180
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571103|ref|XP_002526502.1| Pectinesterase inhibitor, putative [Ricinus communis] gi|223534177|gb|EEF35893.1| Pectinesterase inhibitor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357513037|ref|XP_003626807.1| Pectinesterase inhibitor [Medicago truncatula] gi|355520829|gb|AET01283.1| Pectinesterase inhibitor [Medicago truncatula] gi|388503216|gb|AFK39674.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|351723377|ref|NP_001235997.1| uncharacterized protein LOC100306248 precursor [Glycine max] gi|255627995|gb|ACU14342.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|112383518|gb|ABI17896.1| invertase inhibitor [Coffea canephora] | Back alignment and taxonomy information |
|---|
| >gi|1616628|emb|CAA56643.1| sts15 [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
| >gi|449454568|ref|XP_004145026.1| PREDICTED: putative invertase inhibitor-like [Cucumis sativus] gi|449470660|ref|XP_004153034.1| PREDICTED: putative invertase inhibitor-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449533361|ref|XP_004173644.1| PREDICTED: putative invertase inhibitor-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449454566|ref|XP_004145025.1| PREDICTED: putative invertase inhibitor-like [Cucumis sativus] gi|449470658|ref|XP_004153033.1| PREDICTED: putative invertase inhibitor-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|307136270|gb|ADN34098.1| invertase inhibitor [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 172 | ||||||
| TAIR|locus:2171012 | 176 | AT5G46940 [Arabidopsis thalian | 0.906 | 0.886 | 0.322 | 9.2e-20 | |
| TAIR|locus:2159833 | 199 | AT5G38610 [Arabidopsis thalian | 0.895 | 0.773 | 0.329 | 4e-19 | |
| TAIR|locus:2170967 | 164 | AT5G46970 [Arabidopsis thalian | 0.796 | 0.835 | 0.345 | 2.2e-18 | |
| TAIR|locus:2171032 | 174 | AT5G46960 [Arabidopsis thalian | 0.901 | 0.890 | 0.316 | 9.5e-18 | |
| TAIR|locus:2171002 | 178 | AT5G46930 [Arabidopsis thalian | 0.901 | 0.870 | 0.301 | 5.3e-17 | |
| TAIR|locus:2171027 | 174 | AT5G46950 [Arabidopsis thalian | 0.901 | 0.890 | 0.310 | 1.1e-16 | |
| TAIR|locus:2199506 | 192 | AT1G54620 [Arabidopsis thalian | 0.941 | 0.843 | 0.242 | 6.6e-10 | |
| TAIR|locus:2174774 | 180 | C/VIF2 "cell wall / vacuolar i | 0.773 | 0.738 | 0.258 | 2.2e-09 | |
| TAIR|locus:4010713751 | 175 | AT3G17152 [Arabidopsis thalian | 0.831 | 0.817 | 0.308 | 5.9e-09 | |
| TAIR|locus:2086072 | 184 | AT3G17150 [Arabidopsis thalian | 0.779 | 0.728 | 0.307 | 7.6e-09 |
| TAIR|locus:2171012 AT5G46940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 51/158 (32%), Positives = 81/158 (51%)
Query: 16 GHNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCA-NLGELGMISMKLTRENVTKTRS 74
G ++ +CKK P +N CVTSL+ + +++ A +L L M S K T +
Sbjct: 20 GQTLIRNSCKKATATSPKFKYNLCVTSLETNPQAKTAKDLAGLVMASTKNAVTKATTLKG 79
Query: 75 YIXXXXXXXXXXPFMRACLHDCFDLYSDAVPTLKQAMKDYKAKQYEDANIGVSSVVDACT 134
+ L DC LY+DA+ +L +A+ K++ Y +S+ +D +
Sbjct: 80 TVDKIIKGKKVNKMTAMPLRDCLQLYTDAIGSLNEALAGVKSRNYPTVKTVLSAAMDTPS 139
Query: 135 TCEDGFKENQGAVSPLTKRNYDAFQLSVISLSIINMLK 172
TCE GFKE + A SP+TK N + +Q+ +I L+ NMLK
Sbjct: 140 TCETGFKERK-APSPVTKENDNLYQMILIPLAFTNMLK 176
|
|
| TAIR|locus:2159833 AT5G38610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170967 AT5G46970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171032 AT5G46960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171002 AT5G46930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171027 AT5G46950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199506 AT1G54620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174774 C/VIF2 "cell wall / vacuolar inhibitor of fructosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:4010713751 AT3G17152 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086072 AT3G17150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pm.C_400050 | hypothetical protein (181 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 172 | |||
| TIGR01614 | 178 | TIGR01614, PME_inhib, pectinesterase inhibitor dom | 4e-35 | |
| pfam04043 | 145 | pfam04043, PMEI, Plant invertase/pectin methyleste | 3e-30 | |
| smart00856 | 148 | smart00856, PMEI, Plant invertase/pectin methylest | 6e-27 | |
| PLN02314 | 586 | PLN02314, PLN02314, pectinesterase | 1e-04 | |
| PLN02484 | 587 | PLN02484, PLN02484, probable pectinesterase/pectin | 2e-04 | |
| PLN02313 | 587 | PLN02313, PLN02313, Pectinesterase/pectinesterase | 5e-04 | |
| PLN02933 | 530 | PLN02933, PLN02933, Probable pectinesterase/pectin | 0.001 |
| >gnl|CDD|233492 TIGR01614, PME_inhib, pectinesterase inhibitor domain | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 4e-35
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 1 LFFFFLFVCSFHGITGH------NIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANL 54
L F L + + + +++ CKK NFC+++L++D S A+L
Sbjct: 7 LLLFLLLLSLVATSSSNSLNATQSLIKRICKK------TEYPNFCISTLKSDPSSAKADL 60
Query: 55 GELGMISMKLTRENVTKTRSYIKDLLKKKKLDPFMRACLHDCFDLYSDAVPTLKQAMKDY 114
L IS+ N + T +I LL K DP ++ L DC +LYSDAV L +A+
Sbjct: 61 QGLANISVSAALSNASDTLDHISKLLLTKG-DPRDKSALEDCVELYSDAVDALDKALASL 119
Query: 115 KAKQYEDANIGVSSVVDACTTCEDGFKE-NQGAVSPLTKRNYDAFQLSVISLSIINML 171
K+K Y DA +SS + +TCEDGF+E SPLTKRN + +LS I+L+II ML
Sbjct: 120 KSKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177
|
This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by This model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family. Length = 178 |
| >gnl|CDD|217858 pfam04043, PMEI, Plant invertase/pectin methylesterase inhibitor | Back alignment and domain information |
|---|
| >gnl|CDD|214860 smart00856, PMEI, Plant invertase/pectin methylesterase inhibitor | Back alignment and domain information |
|---|
| >gnl|CDD|215179 PLN02314, PLN02314, pectinesterase | Back alignment and domain information |
|---|
| >gnl|CDD|178102 PLN02484, PLN02484, probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >gnl|CDD|177947 PLN02313, PLN02313, Pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >gnl|CDD|178521 PLN02933, PLN02933, Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 172 | |||
| TIGR01614 | 178 | PME_inhib pectinesterase inhibitor domain. This mo | 100.0 | |
| smart00856 | 148 | PMEI Plant invertase/pectin methylesterase inhibit | 99.98 | |
| PF04043 | 152 | PMEI: Plant invertase/pectin methylesterase inhibi | 99.97 | |
| PLN02468 | 565 | putative pectinesterase/pectinesterase inhibitor | 99.96 | |
| PLN02484 | 587 | probable pectinesterase/pectinesterase inhibitor | 99.96 | |
| PLN02314 | 586 | pectinesterase | 99.95 | |
| PLN02708 | 553 | Probable pectinesterase/pectinesterase inhibitor | 99.95 | |
| PLN02313 | 587 | Pectinesterase/pectinesterase inhibitor | 99.95 | |
| PLN02416 | 541 | probable pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02995 | 539 | Probable pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02217 | 670 | probable pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02506 | 537 | putative pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02301 | 548 | pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02990 | 572 | Probable pectinesterase/pectinesterase inhibitor | 99.94 | |
| PLN02713 | 566 | Probable pectinesterase/pectinesterase inhibitor | 99.93 | |
| PLN02197 | 588 | pectinesterase | 99.93 | |
| PLN02745 | 596 | Putative pectinesterase/pectinesterase inhibitor | 99.93 | |
| PLN02698 | 497 | Probable pectinesterase/pectinesterase inhibitor | 99.92 | |
| PLN03043 | 538 | Probable pectinesterase/pectinesterase inhibitor; | 99.91 | |
| PLN02933 | 530 | Probable pectinesterase/pectinesterase inhibitor | 99.87 | |
| PLN02201 | 520 | probable pectinesterase/pectinesterase inhibitor | 99.86 | |
| PLN02488 | 509 | probable pectinesterase/pectinesterase inhibitor | 99.77 | |
| PLN02170 | 529 | probable pectinesterase/pectinesterase inhibitor | 99.58 | |
| PLN02916 | 502 | pectinesterase family protein | 99.54 | |
| PF07870 | 50 | DUF1657: Protein of unknown function (DUF1657); In | 86.73 |
| >TIGR01614 PME_inhib pectinesterase inhibitor domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=207.79 Aligned_cols=150 Identities=42% Similarity=0.637 Sum_probs=139.2
Q ss_pred cchhHHHHHhhhhhcCCCcccccchhccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 036528 16 GHNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANLGELGMISMKLTRENVTKTRSYIKDLLKKKKLDPFMRACLHD 95 (172)
Q Consensus 16 ~~~~i~~~C~~t~~~~p~v~~~~C~~~L~s~p~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~~l~~ 95 (172)
+.+.|+++|++| .| |++|+++|.++|+++.+|+.+++.++++.+..+++++.+++.++.++. +++..+.++++
T Consensus 28 ~~~~i~~~C~~t--~~----~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~-~~~~~~~al~~ 100 (178)
T TIGR01614 28 TQSLIKRICKKT--EY----PNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISKLLLTK-GDPRDKSALED 100 (178)
T ss_pred hHHHHHHHHcCC--CC----hHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHH
Confidence 568999999999 34 499999999999988889999999999999999999999999998765 58899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhHHHhhhhhHhHHHHhhcccCC-CcccccchhhhHHHHHhHHHHHHhhcC
Q 036528 96 CFDLYSDAVPTLKQAMKDYKAKQYEDANIGVSSVVDACTTCEDGFKENQG-AVSPLTKRNYDAFQLSVISLSIINMLK 172 (172)
Q Consensus 96 C~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~~~-~~~~l~~~~~~~~~l~sialai~~~l~ 172 (172)
|.++|+.+++.|+++.++++.++|+++++|+++|++++++|+|+|.+.++ .++||..+++++.+|++|+++|++++.
T Consensus 101 C~~~y~~a~~~L~~a~~~l~~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~~ 178 (178)
T TIGR01614 101 CVELYSDAVDALDKALASLKSKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKMLT 178 (178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988753 458899999999999999999999874
|
This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family. |
| >smart00856 PMEI Plant invertase/pectin methylesterase inhibitor | Back alignment and domain information |
|---|
| >PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues | Back alignment and domain information |
|---|
| >PLN02468 putative pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02484 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02314 pectinesterase | Back alignment and domain information |
|---|
| >PLN02708 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02313 Pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02416 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02995 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02217 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02506 putative pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02301 pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02990 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02713 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02197 pectinesterase | Back alignment and domain information |
|---|
| >PLN02745 Putative pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02698 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional | Back alignment and domain information |
|---|
| >PLN02933 Probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02201 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02488 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02170 probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
| >PLN02916 pectinesterase family protein | Back alignment and domain information |
|---|
| >PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 172 | ||||
| 1xg2_B | 153 | Crystal Structure Of The Complex Between Pectin Met | 3e-08 | ||
| 1rj1_A | 151 | Crystal Structure Of A Cell Wall Invertase Inhibito | 2e-04 |
| >pdb|1XG2|B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein Length = 153 | Back alignment and structure |
|
| >pdb|1RJ1|A Chain A, Crystal Structure Of A Cell Wall Invertase Inhibitor From Tobacco Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 172 | |||
| 2cj4_A | 150 | Invertase inhibitor; protein binding, four-helix b | 3e-38 | |
| 1xg2_B | 153 | Pectinesterase inhibitor; protein-protein complex, | 2e-37 | |
| 1x91_A | 153 | Invertase/pectin methylesterase inhibitor family p | 2e-35 |
| >2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B* Length = 150 | Back alignment and structure |
|---|
Score = 127 bits (319), Expect = 3e-38
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 11/157 (7%)
Query: 16 GHNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANLGELGMISMKLTRENVTKTRSY 75
+N+V TCK ++ C+ +L +D +S ++ L +I + + +
Sbjct: 3 MNNLVETTCKN------TPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVT 56
Query: 76 IKDLLKKKKLDPFMRACLHDCFDLYSDAVP-TLKQAMKDYKAKQYEDANIGVSSVVDACT 134
I L + L +C Y + +L +A++ + A G+
Sbjct: 57 ISKLRHSNP-PAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQ 115
Query: 135 TCEDGFKENQGAVSPLTKRNYDAFQLSVISLSIINML 171
CE+ FK G+ SP + N +LS + +I+ L
Sbjct: 116 ECEEYFK---GSKSPFSALNIAVHELSDVGRAIVRNL 149
|
| >1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis} Length = 153 | Back alignment and structure |
|---|
| >1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 172 | |||
| 1xg2_B | 153 | Pectinesterase inhibitor; protein-protein complex, | 100.0 | |
| 2cj4_A | 150 | Invertase inhibitor; protein binding, four-helix b | 100.0 | |
| 1x91_A | 153 | Invertase/pectin methylesterase inhibitor family p | 100.0 |
| >1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=211.34 Aligned_cols=150 Identities=27% Similarity=0.472 Sum_probs=138.9
Q ss_pred cchhHHHHHhhhhhcCCCcccccchhccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 036528 16 GHNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANLGELGMISMKLTRENVTKTRSYIKDLLKKKKLDPFMRACLHD 95 (172)
Q Consensus 16 ~~~~i~~~C~~t~~~~p~v~~~~C~~~L~s~p~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~~l~~ 95 (172)
+++.|+.+|++| .| |++|+++|.++|+++.+|+.+|+++++++++.+++.+..+++++.+.. .+|+.+.+|++
T Consensus 2 ~~~~i~~~C~~T--~~----~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~-~~~~~~~al~d 74 (153)
T 1xg2_B 2 ENHLISEICPKT--RN----PSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA-TDPKLKGRYET 74 (153)
T ss_dssp CCHHHHHHGGGS--SC----HHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHH
T ss_pred hHhHHHHHhcCC--CC----hHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHH
Confidence 457899999998 44 499999999999988889999999999999999999999999998764 68999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhHHHhhhhhHhHHHHhhcccCCCcccccchhhhHHHHHhHHHHHHhhcC
Q 036528 96 CFDLYSDAVPTLKQAMKDYKAKQYEDANIGVSSVVDACTTCEDGFKENQGAVSPLTKRNYDAFQLSVISLSIINMLK 172 (172)
Q Consensus 96 C~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~~~~~~~l~~~~~~~~~l~sialai~~~l~ 172 (172)
|.++|++++++|++++++++.++|.++++|||+|+++++||+|||.+.+..++||..++.++.+|++|+|+|+++|+
T Consensus 75 C~e~y~~a~~~L~~a~~~l~~~~~~d~~t~lSaAlt~~~tC~dgf~~~~~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1xg2_B 75 CSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLP 151 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcccchHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999987643457899999999999999999999874
|
| >2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B* | Back alignment and structure |
|---|
| >1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 172 | ||||
| d1x91a_ | 149 | a.29.6.1 (A:) Pectin methylesterase inhibitor 1, P | 5e-33 | |
| d2cj4a1 | 147 | a.29.6.1 (A:4-150) Invertase inhibitor {Common tob | 1e-32 |
| >d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 149 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Bromodomain-like superfamily: Plant invertase/pectin methylesterase inhibitor family: Plant invertase/pectin methylesterase inhibitor domain: Pectin methylesterase inhibitor 1, PMEI1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 112 bits (282), Expect = 5e-33
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 37 NFCVTSLQADAKSQCANLGELGMISMKLTRENVTKTRSYIKDLLKKKKLDPFMRACLHDC 96
+FC+ L S ANL L ++ T+ T+T ++ ++ DP + C
Sbjct: 15 SFCLKFLNTKFAS--ANLQALAKTTLDSTQARATQTLKKLQSIIDGGV-DPRSKLAYRSC 71
Query: 97 FDLYSDAVPTLKQAMKDYKAKQYEDANIGVSSVVDACTTCEDGFKENQGAVSPLTKRNYD 156
D Y A+ L++A + + N+ VS+ +D TC D K + S + +
Sbjct: 72 VDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKT 131
Query: 157 AFQLSVISLSIINML 171
L I+L I NML
Sbjct: 132 IKNLCGIALVISNML 146
|
| >d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 147 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 172 | |||
| d2cj4a1 | 147 | Invertase inhibitor {Common tobacco (Nicotiana tab | 100.0 | |
| d1x91a_ | 149 | Pectin methylesterase inhibitor 1, PMEI1 {Thale cr | 100.0 |
| >d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Bromodomain-like superfamily: Plant invertase/pectin methylesterase inhibitor family: Plant invertase/pectin methylesterase inhibitor domain: Invertase inhibitor species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=3.4e-34 Score=203.40 Aligned_cols=145 Identities=21% Similarity=0.357 Sum_probs=135.1
Q ss_pred chhHHHHHhhhhhcCCCcccccchhccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 036528 17 HNIVHETCKKCAQNDPNISHNFCVTSLQADAKSQCANLGELGMISMKLTRENVTKTRSYIKDLLKKKKLDPFMRACLHDC 96 (172)
Q Consensus 17 ~~~i~~~C~~t~~~~p~v~~~~C~~~L~s~p~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~~l~~C 96 (172)
+++|+++|++| .|| ++|+++|.++|+++.+|+.+|+.++++.++.+++.+..++.++.+. +.+|..+.+|++|
T Consensus 1 ~~lI~~~C~~T--~~~----~~C~~sL~~~p~s~~ad~~~la~~av~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C 73 (147)
T d2cj4a1 1 NNLVETTCKNT--PNY----QLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHS-NPPAAWKGPLKNC 73 (147)
T ss_dssp CHHHHHHHHTS--SCH----HHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCCGGGHHHHHHH
T ss_pred ChHHHHhhcCC--CCc----HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHH
Confidence 36899999999 455 9999999999999889999999999999999999999999999876 4789999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHhhcchhHHHhHHHhhhhhHhHHHHhhcccCCCcccccchhhhHHHHHhHHHHHHhhc
Q 036528 97 FDLYSDAVP-TLKQAMKDYKAKQYEDANIGVSSVVDACTTCEDGFKENQGAVSPLTKRNYDAFQLSVISLSIINML 171 (172)
Q Consensus 97 ~~~y~~a~~-~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~~~~~~~l~~~~~~~~~l~sialai~~~l 171 (172)
.++|+++++ .|++|...+..++|+++++|+|+|++++++|+|+|.+. ++|+..+++++.+|++|+++|+++|
T Consensus 74 ~e~y~~av~~~l~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d~f~~~---~spl~~~~~~~~~l~~ial~i~~~L 146 (147)
T d2cj4a1 74 AFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGS---KSPFSALNIAVHELSDVGRAIVRNL 146 (147)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTTTTS---CCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhHHHHhhHHhCCC---CCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999997 69999999999999999999999999999999999754 4799999999999999999999986
|
| >d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|