Citrus Sinensis ID: 036538

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
EKGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLPEPA
ccccccccEEEEccccccccccccccccccccccccccccHHHHHHccccEEEEEEEEccccEEEEccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEEEcccccccHHHHHHHcccccEEEccccccccccccccHHHHHHcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEcEEccccccHHHHHHHHccEEccccccHHHHcccccccEEEccccc
ccccccccEEEEEEcccHccccccccccccccccccccccHHHHHHcccEEEEEEEEcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHccccHcccccccccccccccccHHHHHHcccEEEEEEcccccccccccccHccEEEEccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEccccccHHHHHHHHccccccccccHHHcccccccccccccccc
ekglpfnryswLVTHNSFAKLGAksafghlalapenqqdsitNQLHNGVRGLMLDMYDFQNDiwlchsfdgrcygsttafqpAKNVLEEVQAFLEANPAEIVTLFIEDyvtspngltkvfdaadlrkywfpvssmpkngeswptvddmihENQRLVVFTSKSAKEASEGIAYQWRYVVENqygdggmkvgscpnraesspmntrskSLVLVnyfpdmpvlplackdnsaplaSMVSTCYEAagkrwpnfiavdfykssngrgapeavdevngrlvcgcgniayckanmsygvcdlpepa
ekglpfnrySWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANmsygvcdlpepa
EKGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLPEPA
*****FNRYSWLVTHNSFAKLGAKSAFGHLALAPE***DSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMP**GESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGG*********************LVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCD*****
**GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRA*******RSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANM****CDLPE**
EKGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCP*********TRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLPEPA
**GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRAES*PMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLP***
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EKGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQYGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLPEPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query299 2.2.26 [Sep-21-2011]
Q93XX5426 PI-PLC X domain-containin no no 0.969 0.680 0.594 1e-103
Q10683487 Uncharacterized protein R yes no 0.404 0.248 0.272 0.0003
>sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1 Back     alignment and function desciption
 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 173/291 (59%), Positives = 216/291 (74%), Gaps = 1/291 (0%)

Query: 3   GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQND 62
           GLPFN+Y+WL+THN+F+   A    G   +   NQ+D+ITNQL NGVRGLMLDMYDF ND
Sbjct: 79  GLPFNKYTWLMTHNAFSNANAPLLPGVERITFYNQEDTITNQLQNGVRGLMLDMYDFNND 138

Query: 63  IWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDA 122
           IWLCHS  G+C+ + TAFQPA N+L EV+AFL  NP EIVT+ IEDYV  P GL+ +F  
Sbjct: 139 IWLCHSLRGQCF-NFTAFQPAINILREVEAFLSQNPTEIVTIIIEDYVHRPKGLSTLFAN 197

Query: 123 ADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQY 182
           A L KYWFPVS MP+ GE WPTV DM+ EN RL+VFTS +AKE  EG+AYQWRY+VEN+ 
Sbjct: 198 AGLDKYWFPVSKMPRKGEDWPTVTDMVQENHRLLVFTSVAAKEDEEGVAYQWRYMVENES 257

Query: 183 GDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEAA 242
           GD G+K GSCPNR ES P+N++S SL L+NYFP  PV   ACK++SAPLA MV TC ++ 
Sbjct: 258 GDPGVKRGSCPNRKESQPLNSKSSSLFLMNYFPTYPVEKDACKEHSAPLAEMVGTCLKSG 317

Query: 243 GKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVC 293
           G R PNF+AV+FY  S+G G  E +D +NG ++CGC  ++ C+   +YG C
Sbjct: 318 GNRMPNFLAVNFYMRSDGGGVFEILDRMNGPVLCGCETLSACQPGAAYGSC 368

Arabidopsis thaliana (taxid: 3702)
>sp|Q10683|Y2075_MYCTU Uncharacterized protein Rv2075c/MT2135 OS=Mycobacterium tuberculosis GN=Rv2075c PE=4 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
356502505 405 PREDICTED: PI-PLC X domain-containing pr 0.986 0.728 0.773 1e-137
297741260397 unnamed protein product [Vitis vinifera] 0.989 0.745 0.765 1e-134
388512969 405 unknown [Lotus japonicus] 0.986 0.728 0.760 1e-134
359475359 400 PREDICTED: LOW QUALITY PROTEIN: PI-PLC X 0.989 0.74 0.765 1e-134
224123376351 predicted protein [Populus trichocarpa] 0.949 0.809 0.768 1e-131
357475315 430 PI-PLC X domain-containing protein [Medi 0.986 0.686 0.700 1e-130
449486740 418 PREDICTED: PI-PLC X domain-containing pr 0.986 0.705 0.746 1e-128
449446091 415 PREDICTED: PI-PLC X domain-containing pr 0.986 0.710 0.746 1e-128
359480853 410 PREDICTED: PI-PLC X domain-containing pr 0.963 0.702 0.715 1e-125
356565586 441 PREDICTED: PI-PLC X domain-containing pr 0.976 0.662 0.703 1e-122
>gi|356502505|ref|XP_003520059.1| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Glycine max] Back     alignment and taxonomy information
 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/296 (77%), Positives = 261/296 (88%), Gaps = 1/296 (0%)

Query: 2   KGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQN 61
           KGLPFNRYSWL THNSFA LG KS  G + L+P NQQD+IT+QL+NGVRGLMLDMYDFQN
Sbjct: 69  KGLPFNRYSWLTTHNSFAILGKKSMTGSVILSPTNQQDTITSQLNNGVRGLMLDMYDFQN 128

Query: 62  DIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFD 121
           DIWLCHSF G+CY + TAFQPA NVL+E+Q FL+ANP+EIVT+FIEDYVTSP GLTKVFD
Sbjct: 129 DIWLCHSFGGQCY-NYTAFQPAINVLKEIQVFLDANPSEIVTIFIEDYVTSPKGLTKVFD 187

Query: 122 AADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQ 181
           AA LRKYWFPVS MPKNG +WPTVDDM+ +NQRLVVFTSKS+KEASEGIAY+WRY+VENQ
Sbjct: 188 AAGLRKYWFPVSRMPKNGGNWPTVDDMVKKNQRLVVFTSKSSKEASEGIAYEWRYLVENQ 247

Query: 182 YGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEA 241
           YG+GGMK GSCPNRAES  MNT+S+SLVLVN+F D+P +  +CKDNSAPL SMV+TCYEA
Sbjct: 248 YGNGGMKAGSCPNRAESPSMNTKSRSLVLVNFFRDLPDVTKSCKDNSAPLLSMVNTCYEA 307

Query: 242 AGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYGVCDLPE 297
           A KRWPNFIAVDFYK S+G GAP+A+D  NG LVCGC N+A CKANM++GVC LPE
Sbjct: 308 ADKRWPNFIAVDFYKRSDGGGAPDAIDVANGHLVCGCENLASCKANMTFGVCQLPE 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297741260|emb|CBI32391.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388512969|gb|AFK44546.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|359475359|ref|XP_003631668.1| PREDICTED: LOW QUALITY PROTEIN: PI-PLC X domain-containing protein At5g67130-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123376|ref|XP_002330300.1| predicted protein [Populus trichocarpa] gi|222871335|gb|EEF08466.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357475315|ref|XP_003607943.1| PI-PLC X domain-containing protein [Medicago truncatula] gi|355508998|gb|AES90140.1| PI-PLC X domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449486740|ref|XP_004157386.1| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449446091|ref|XP_004140805.1| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359480853|ref|XP_002277922.2| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Vitis vinifera] gi|296082409|emb|CBI21414.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565586|ref|XP_003551020.1| PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
TAIR|locus:2012181359 AT1G49740 [Arabidopsis thalian 0.966 0.805 0.696 9.7e-112
TAIR|locus:2090709413 AT3G19310 [Arabidopsis thalian 0.986 0.714 0.672 2.3e-110
TAIR|locus:4010713931408 AT4G36945 [Arabidopsis thalian 0.986 0.723 0.641 2.8e-105
TAIR|locus:2155523426 AT5G67130 [Arabidopsis thalian 0.969 0.680 0.594 1.2e-95
TAIR|locus:2023898346 AT1G13680 [Arabidopsis thalian 0.913 0.789 0.526 6e-80
ASPGD|ASPL0000051754381 AN1855 [Emericella nidulans (t 0.645 0.506 0.3 7.2e-13
ASPGD|ASPL0000053240470 AN1330 [Emericella nidulans (t 0.772 0.491 0.223 4.5e-07
UNIPROTKB|G4N3K9375 MGG_04991 "Uncharacterized pro 0.568 0.453 0.280 1.2e-05
TAIR|locus:2012181 AT1G49740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
 Identities = 202/290 (69%), Positives = 235/290 (81%)

Query:     2 KGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQN 61
             KGLPFN+YSWL THNSFA+LG  S  G   LAP NQQDSIT+QL+NGVRG MLDMYDFQN
Sbjct:    71 KGLPFNKYSWLTTHNSFARLGEVSRTGSAILAPTNQQDSITSQLNNGVRGFMLDMYDFQN 130

Query:    62 DIWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFD 121
             DIWLCHSFDG C+ + TAFQPA N+L E Q FLE N  E+VT+ IEDYV SP GLTKVFD
Sbjct:   131 DIWLCHSFDGTCF-NFTAFQPAINILREFQVFLEKNKEEVVTIIIEDYVKSPKGLTKVFD 189

Query:   122 AADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQ 181
             AA LRK+ FPVS MPKNG  WP +DDM+ +NQRL+VFTS S KEA+EGIAYQW+Y+VENQ
Sbjct:   190 AAGLRKFMFPVSRMPKNGGDWPRLDDMVRKNQRLLVFTSDSHKEATEGIAYQWKYMVENQ 249

Query:   182 YGDGGMKVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLACKDNSAPLASMVSTCYEA 241
             YG+GG+KVG CPNRA+S+PM+ +SKSLVLVN+FPD   + +ACK NSA L   + TCY+A
Sbjct:   250 YGNGGLKVGVCPNRAQSAPMSDKSKSLVLVNHFPDAADVIVACKQNSASLLESIKTCYQA 309

Query:   242 AGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLVCGCGNIAYCKANMSYG 291
             AG+RWPNFIAVDFYK S+G GAP+AVD  NG L+CGC N A CKA+   G
Sbjct:   310 AGQRWPNFIAVDFYKRSDGGGAPQAVDVANGNLICGCDNFAACKADGKCG 359
GO:0004629 "phospholipase C activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2090709 AT3G19310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713931 AT4G36945 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155523 AT5G67130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2023898 AT1G13680 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000051754 AN1855 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000053240 AN1330 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4N3K9 MGG_04991 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00036614001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (397 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
cd08588270 cd08588, PI-PLCc_At5g67130_like, Catalytic domain 1e-100
cd08557271 cd08557, PI-PLCc_bacteria_like, Catalytic domain o 1e-47
cd08590267 cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of 1e-16
cd08587288 cd08587, PI-PLCXDc_like, Catalytic domain of phosp 6e-10
cd08586279 cd08586, PI-PLCc_BcPLC_like, Catalytic domain of B 4e-09
>gnl|CDD|176530 cd08588, PI-PLCc_At5g67130_like, Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs Back     alignment and domain information 
 Score =  293 bits (753), Expect = e-100
 Identities = 113/276 (40%), Positives = 153/276 (55%), Gaps = 21/276 (7%)

Query: 3   GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQND 62
              ++ Y++L THNSFA     ++     LAP NQ+D IT QL +GVRGLMLD++D    
Sbjct: 9   DRTYDEYTFLTTHNSFA-----NSEDAFFLAP-NQEDDITKQLDDGVRGLMLDIHDANGG 62

Query: 63  IWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGL-TKVFD 121
           + LCHS  G          P  +VL EV  FL+ANP E+VTLF+EDYV+    L +K+F 
Sbjct: 63  LRLCHSVCGLG-----DGGPLSDVLREVVDFLDANPNEVVTLFLEDYVSPGPLLRSKLFR 117

Query: 122 AADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKE-ASEGIAYQWRYVVEN 180
            A L    +   +MP  G  WPT+ +MI  N+RL+VFT          G+ YQ+ Y VEN
Sbjct: 118 VAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLVFTDNEDVSTEPPGVMYQFDYTVEN 177

Query: 181 QYGDGGMKVGSCPNRAESSPMNTRS---KSLVLVNYFPDMPVLPLA--CKDNSAPLASMV 235
            +  GG    SC  R  S P++  +   + L L+N+F D+PV   A    +    L   +
Sbjct: 178 PFSVGGDDDWSCTVRRGSGPLSRIAPGFRRLFLMNHFRDVPVPITAANDNNGDGLLLRHL 237

Query: 236 STCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVN 271
           + C  AAG R PNF+AVDFY   +   A EAVDE+N
Sbjct: 238 NNCRPAAGGRKPNFVAVDFYNIGD---AFEAVDELN 270

This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Length = 270
>gnl|CDD|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins Back     alignment and domain information
>gnl|CDD|176532 cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins Back     alignment and domain information
>gnl|CDD|176529 cd08587, PI-PLCXDc_like, Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins Back     alignment and domain information
>gnl|CDD|176528 cd08586, PI-PLCc_BcPLC_like, Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 299
cd08588270 PI-PLCc_At5g67130_like Catalytic domain of Arabido 100.0
cd08622276 PI-PLCXDc_CG14945_like Catalytic domain of Drosoph 100.0
cd08621300 PI-PLCXDc_like_2 Catalytic domain of uncharacteriz 100.0
cd08557271 PI-PLCc_bacteria_like Catalytic domain of bacteria 100.0
cd08616290 PI-PLCXD1c Catalytic domain of phosphatidylinosito 100.0
cd08587288 PI-PLCXDc_like Catalytic domain of phosphatidylino 100.0
cd08590267 PI-PLCc_Rv2075c_like Catalytic domain of uncharact 100.0
cd08620281 PI-PLCXDc_like_1 Catalytic domain of uncharacteriz 99.98
PTZ00268380 glycosylphosphatidylinositol-specific phospholipas 99.98
cd08586279 PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce 99.97
KOG4306306 consensus Glycosylphosphatidylinositol-specific ph 99.96
cd08619285 PI-PLCXDc_plant Catalytic domain of phosphatidylin 99.96
PF00388146 PI-PLC-X: Phosphatidylinositol-specific phospholip 99.92
cd08589324 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc 99.9
smart00148135 PLCXc Phospholipase C, catalytic domain (part); do 99.9
cd00137274 PI-PLCc Catalytic domain of prokaryotic and eukary 99.89
cd08599228 PI-PLCc_plant Catalytic domain of plant phosphatid 99.16
cd08558226 PI-PLCc_eukaryota Catalytic domain of eukaryotic p 99.13
cd08598231 PI-PLC1c_yeast Catalytic domain of putative yeast 99.08
cd08628254 PI-PLCc_gamma2 Catalytic domain of metazoan phosph 99.04
cd08592229 PI-PLCc_gamma Catalytic domain of metazoan phospho 99.04
cd08597260 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan 99.03
cd08631258 PI-PLCc_delta4 Catalytic domain of metazoan phosph 98.69
cd08627229 PI-PLCc_gamma1 Catalytic domain of metazoan phosph 98.69
cd08632253 PI-PLCc_eta1 Catalytic domain of metazoan phosphoi 98.67
cd08594227 PI-PLCc_eta Catalytic domain of metazoan phosphoin 98.64
cd08633254 PI-PLCc_eta2 Catalytic domain of metazoan phosphoi 98.63
cd08630258 PI-PLCc_delta3 Catalytic domain of metazoan phosph 98.62
cd08595257 PI-PLCc_zeta Catalytic domain of metazoan phosphoi 98.62
cd08629258 PI-PLCc_delta1 Catalytic domain of metazoan phosph 98.58
cd08593257 PI-PLCc_delta Catalytic domain of metazoan phospho 98.55
cd08626257 PI-PLCc_beta4 Catalytic domain of metazoan phospho 98.55
cd08591257 PI-PLCc_beta Catalytic domain of metazoan phosphoi 98.52
cd08596254 PI-PLCc_epsilon Catalytic domain of metazoan phosp 98.52
cd08624261 PI-PLCc_beta2 Catalytic domain of metazoan phospho 98.51
cd08623258 PI-PLCc_beta1 Catalytic domain of metazoan phospho 98.48
cd08625258 PI-PLCc_beta3 Catalytic domain of metazoan phospho 98.41
PLN02223 537 phosphoinositide phospholipase C 98.29
PLN02230 598 phosphoinositide phospholipase C 4 98.28
PLN02952 599 phosphoinositide phospholipase C 98.16
KOG0169 746 consensus Phosphoinositide-specific phospholipase 98.13
PLN02222 581 phosphoinositide phospholipase C 2 98.11
PLN02228 567 Phosphoinositide phospholipase C 98.04
cd08555179 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi 97.74
PF0349051 Varsurf_PPLC: Variant-surface-glycoprotein phospho 96.66
KOG1264 1267 consensus Phospholipase C [Lipid transport and met 96.51
KOG1265 1189 consensus Phospholipase C [Lipid transport and met 94.23
cd08556189 GDPD Glycerophosphodiester phosphodiesterase domai 88.58
cd08577228 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic 85.38
COG4451127 RbcS Ribulose bisphosphate carboxylase small subun 83.84
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs Back     alignment and domain information 
Probab=100.00  E-value=4.4e-66  Score=473.92  Aligned_cols=256  Identities=43%  Similarity=0.672  Sum_probs=223.0

Q ss_pred             CCccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeecccceeCCceEEEecCCCCCCCCCCccc
Q 036538            2 KGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQ   81 (299)
Q Consensus         2 ~~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~~~~l~~~H~~~~~C~~~~~~~~   81 (299)
                      .++||++++||||||||+......      .++.||+.+|++||++|||+||||+|..++++++||+.   |.+ . ..+
T Consensus         8 ~~~~~~~it~~gtHNS~~~~~~~~------~~~~nQ~~si~~QL~~GiR~l~ld~~~~~~~~~lcH~~---~~~-~-~~~   76 (270)
T cd08588           8 CDRTYDEYTFLTTHNSFANSEDAF------FLAPNQEDDITKQLDDGVRGLMLDIHDANGGLRLCHSV---CGL-G-DGG   76 (270)
T ss_pred             CCcccccceeEEeccCccccCCCc------ccccccCCCHHHHHHhCcceEeeeEEecCCCEEEECCC---ccc-c-CCc
Confidence            579999999999999998765421      36899999999999999999999999999999999998   876 2 247


Q ss_pred             cHHHHHHHHHHHHhcCCCCeEEEeecccccCcc-hhhhhhhccCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEEEEEe
Q 036538           82 PAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPN-GLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTS  160 (299)
Q Consensus        82 ~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~~-~l~~~f~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvvvf~~  160 (299)
                      +++++|++|++||++||+|||||+|+++..... .+..+|+.+||++|+|+|+..+....+||||+|||++|||||||++
T Consensus        77 ~~~d~L~~i~~fL~~nP~EvV~l~l~~~~~~~~~~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvvf~~  156 (270)
T cd08588          77 PLSDVLREVVDFLDANPNEVVTLFLEDYVSPGPLLRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLVFTD  156 (270)
T ss_pred             cHHHHHHHHHHHHHhCCCcEEEEEEEeCCCcchHHHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEEEEe
Confidence            999999999999999999999999998753332 4778888899999999988766667899999999999999999999


Q ss_pred             CCccc-cccCcccccceeeeCCCCCCCCCcCCCCCCCCCCCCCcc---CccceeeccCCCCCCcccc--ccCCChhHHHH
Q 036538          161 KSAKE-ASEGIAYQWRYVVENQYGDGGMKVGSCPNRAESSPMNTR---SKSLVLVNYFPDMPVLPLA--CKDNSAPLASM  234 (299)
Q Consensus       161 ~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~C~~R~~~~~~~~~---~~~l~l~Nhf~~~P~~~~a--~~~n~~~L~~~  234 (299)
                      +.+.+ ..+|++++|+|+|||+|++++...|+|..|+++.+....   +++|||||||++.|....+  +.++.++|+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~C~~~r~~~~~~~~~~~~~~l~l~Nhf~~~~~~~~~~n~~~~~~~l~~~  236 (270)
T cd08588         157 NEDVSTEPPGVMYQFDYTVENPFSVGGDDDWSCTVRRGSGPLSRIAPGFRRLFLMNHFRDVPVPITAANDNNGDGLLLRH  236 (270)
T ss_pred             cCCCCCCCCeeeecceeEEEcCCCCCCCCCCCCCCCCCCCCcccccccccceeEEecCCCCccccccccccCCcHHHHHH
Confidence            87654 457999999999999999998778999966665544332   4799999999999888777  46667899999


Q ss_pred             HHHhHhhhCCCCceEEEEeccccCCCCChHHHHHHhc
Q 036538          235 VSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVN  271 (299)
Q Consensus       235 ~~~C~~~~g~r~pNfv~vDf~~~~~~g~~~~~v~~lN  271 (299)
                      ++.|.+++|+|+||||+||||++   |+++++|++||
T Consensus       237 ~~~C~~~~~~r~PNfv~VDf~~~---G~~~~~~~~lN  270 (270)
T cd08588         237 LNNCRPAAGGRKPNFVAVDFYNI---GDAFEAVDELN  270 (270)
T ss_pred             HHHHHHHhCCCCCCEEEEeeccc---CCHHHHHHHhC
Confidence            99999999779999999999996   68999999998

This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing Back     alignment and domain information
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins Back     alignment and domain information
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins Back     alignment and domain information
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1 Back     alignment and domain information
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins Back     alignment and domain information
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins Back     alignment and domain information
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins Back     alignment and domain information
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional Back     alignment and domain information
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins Back     alignment and domain information
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms] Back     alignment and domain information
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants Back     alignment and domain information
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3 Back     alignment and domain information
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins Back     alignment and domain information
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X Back     alignment and domain information
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C Back     alignment and domain information
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins Back     alignment and domain information
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C Back     alignment and domain information
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 Back     alignment and domain information
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma Back     alignment and domain information
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein Back     alignment and domain information
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 Back     alignment and domain information
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 Back     alignment and domain information
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 Back     alignment and domain information
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta Back     alignment and domain information
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 Back     alignment and domain information
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 Back     alignment and domain information
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta Back     alignment and domain information
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 Back     alignment and domain information
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta Back     alignment and domain information
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 Back     alignment and domain information
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta Back     alignment and domain information
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon Back     alignment and domain information
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 Back     alignment and domain information
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 Back     alignment and domain information
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 Back     alignment and domain information
>PLN02223 phosphoinositide phospholipase C Back     alignment and domain information
>PLN02230 phosphoinositide phospholipase C 4 Back     alignment and domain information
>PLN02952 phosphoinositide phospholipase C Back     alignment and domain information
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] Back     alignment and domain information
>PLN02222 phosphoinositide phospholipase C 2 Back     alignment and domain information
>PLN02228 Phosphoinositide phospholipase C Back     alignment and domain information
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily Back     alignment and domain information
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis Back     alignment and domain information
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins Back     alignment and domain information
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases Back     alignment and domain information
>COG4451 RbcS Ribulose bisphosphate carboxylase small subunit [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
3ea1_A298 1-phosphatidylinositol phosphodiesterase; phosphat 6e-34
2plc_A274 PI-PLC, phosphatidylinositol-specific phospholipas 4e-27
3v1h_A306 1-phosphatidylinositol phosphodiesterase; PI-catio 9e-24
3h4x_A339 Phosphatidylinositol-specific phospholipase C1; PI 1e-08
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A Length = 298 Back     alignment and structure
 Score =  124 bits (312), Expect = 6e-34
 Identities = 41/291 (14%), Positives = 88/291 (30%), Gaps = 34/291 (11%)

Query: 4   LPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGL-MLDMYDFQND 62
           +P  R S   TH+S                   Q+     Q+ +G R   +       N 
Sbjct: 21  IPLARISIPGTHDSGTFKLQNPIKQVWG---MTQEYDFRYQMDHGARIFDIRGRLTDDNT 77

Query: 63  IWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDA 122
           I L H                   + E + FL+ NP+E + + ++       G    F +
Sbjct: 78  IVLHHGPLYLYV-------TLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSS 130

Query: 123 ADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGI-AYQW------- 174
              + Y+     +   G     + D      ++V+    S    S G   + W       
Sbjct: 131 TFEKNYFVDPIFLKTEG--NIKLGDARG---KIVLLKRYSGSNESGGYNNFYWPDNETFT 185

Query: 175 -------RYVVENQY-GDGGMKVGSCPNRAESSPMNTRSKSLVLVNYF--PDMPVLPLAC 224
                     V+++Y  +   KV S  +  + +  N+   + + +N+           + 
Sbjct: 186 TTVNQNVNVTVQDKYKVNYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSP 245

Query: 225 KDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLV 275
              ++ +   ++   +        ++  D+          + V   N  L+
Sbjct: 246 YSYASSINPEIANDIKQKNPTRVGWVIQDYINEKWSPLLYQEVIRANKSLI 296
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* Length = 274 Back     alignment and structure
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 3v18_A 3v16_A* Length = 306 Back     alignment and structure
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
2plc_A274 PI-PLC, phosphatidylinositol-specific phospholipas 100.0
3ea1_A298 1-phosphatidylinositol phosphodiesterase; phosphat 99.97
3v1h_A306 1-phosphatidylinositol phosphodiesterase; PI-catio 99.97
3h4x_A339 Phosphatidylinositol-specific phospholipase C1; PI 99.78
1djx_A 624 PLC-D1, phosphoinositide-specific phospholipase C, 97.93
2zkm_X 799 1-phosphatidylinositol-4,5-bisphosphate phosphodie 97.88
3qr0_A 816 Phospholipase C-beta (PLC-beta); PH domain, EF han 97.73
3ohm_B 885 1-phosphatidylinositol-4,5-bisphosphate phosphodi 97.5
3rlg_A302 Sphingomyelin phosphodiesterase D lisictox-alphai; 85.83
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* Back     alignment and structure
Probab=100.00  E-value=3.5e-36  Score=275.98  Aligned_cols=241  Identities=17%  Similarity=0.239  Sum_probs=153.5

Q ss_pred             CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeecccceeCCceEEEecCCCCCCCCCCcccc
Q 036538            3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQP   82 (299)
Q Consensus         3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~~~~l~~~H~~~~~C~~~~~~~~~   82 (299)
                      ++||++|+||||||||++..+.. ..+...++.||+.+|++||++|||+||||++   +++++||+.   |..    ..+
T Consensus        13 ~~~l~~l~ipGtHdS~~~~~~~~-~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~---~~~~~~H~~---~~~----~~~   81 (274)
T 2plc_A           13 TTNLAALSIPGTHDTMSYNGDIT-WTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP---IFL----NAS   81 (274)
T ss_dssp             TCBGGGSEEEEETTTTTTSCSHH-HHHTHHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---EEE----EEE
T ss_pred             CCeeeeeeeeeecchhhccCCCc-cccccccccCCCcCHHHHHHhCCcEEEEEEC---CcEEEEEcC---CCC----CCC
Confidence            68999999999999999865311 0111247899999999999999999999999   789999997   532    368


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEeecc-cccCcchh----hhhhhccCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEEE
Q 036538           83 AKNVLEEVQAFLEANPAEIVTLFIED-YVTSPNGL----TKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVV  157 (299)
Q Consensus        83 l~~~L~eI~~fL~~nP~EvViL~l~d-~~~~~~~l----~~~f~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvvv  157 (299)
                      ++++|.+|++||++||+|||||.+++ +. ....+    ..++  +++++++|+|+.. .....||||+||  +|||||+
T Consensus        82 ~~~~L~~i~~fL~~~P~EvVil~~~~~~~-~~~~~~~~~~~l~--~~l~~~~~~~~~~-~~~~~~pTL~e~--rGK~vlv  155 (274)
T 2plc_A           82 LSGVLETITQFLKKNPKETIIMRLKDEQN-SNDSFDYRIQPLI--NIYKDYFYTTPRT-DTSNKIPTLKDV--RGKILLL  155 (274)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEEETTC-SCSHHHHHHHHHH--HHTGGGBCEEESS-CCCCCCCBTTTT--TTCEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEEeCCC-CCCcHHHHHHHHH--HHhhceeecCccc-ccCCCCCCHHHh--CCCEEEE
Confidence            99999999999999999999999996 43 22222    2233  5789999987533 234689999999  6999999


Q ss_pred             EEeCCccc---cccCccccc---ceeeeCCCCCCCC-CcC---CCC-CCCCCCCCCccCccceeeccCCCC---CC-ccc
Q 036538          158 FTSKSAKE---ASEGIAYQW---RYVVENQYGDGGM-KVG---SCP-NRAESSPMNTRSKSLVLVNYFPDM---PV-LPL  222 (299)
Q Consensus       158 f~~~~~~~---~~~~~~~~~---~~~~e~~~~~~~~-~~~---~C~-~R~~~~~~~~~~~~l~l~Nhf~~~---P~-~~~  222 (299)
                      +.......   ....+.+.|   ....++.|...+. ..+   .+. .+..      .....+.+||.-..   +. +..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~w~~~~~~iqD~y~~~~~~~K~~~i~~~l~~a~------~~~~~~~iN~~S~~~~~~~p~~~  229 (274)
T 2plc_A          156 SENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQAS------KADNKLFLNHISATSLTFTPRQY  229 (274)
T ss_dssp             EESTTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHHHHH------HCSSSEEEEECCCBCSSSCHHHH
T ss_pred             EeCCCCCCCCcCcccccccCCCCCccccccCCCCcHHHHHHHHHHHHHHhh------cCCCCeEEEEEcccCCCCCHHHH
Confidence            87542110   000000011   1113444432210 000   011 1110      01223566774431   11 122


Q ss_pred             cccCCChhHHHHHHHhHhhhCCCCceEEEEeccccCCCCChHHHHHHhcC
Q 036538          223 ACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNG  272 (299)
Q Consensus       223 a~~~n~~~L~~~~~~C~~~~g~r~pNfv~vDf~~~~~~g~~~~~v~~lN~  272 (299)
                      |...|. .+...+..|... +.+.+|||++||++    ++++++|+++|.
T Consensus       230 A~~~n~-~l~~~l~~~~~~-~~~~~gIV~~DFv~----~~~i~~vI~~N~  273 (274)
T 2plc_A          230 AAALNN-KVEQFVLNLTSE-KVRGLGILIMDFPE----KQTIKNIIKNNK  273 (274)
T ss_dssp             HHHHHH-HHHHHHHHHHHT-TCCCCEEEEESSCC----HHHHHHHHTTSC
T ss_pred             HHHHhH-HHHHHHHHHhcC-CCCcccEEEEeCCC----chhHHHHHhccC
Confidence            222222 122333334433 34579999999996    368999999996
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A Back     alignment and structure
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A* Back     alignment and structure
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Back     alignment and structure
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Back     alignment and structure
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Back     alignment and structure
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Back     alignment and structure
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Back     alignment and structure
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 299
d2ptda_296 c.1.18.2 (A:) Phosphatidylinositol-specific phosph 3e-40
d2plca_274 c.1.18.2 (A:) Phosphatidylinositol-specific phosph 1e-34
>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Bacterial PLC
domain: Phosphatidylinositol-specific phospholipase C
species: Bacillus cereus [TaxId: 1396]

 Score =  139 bits (352), Expect = 3e-40
 Identities = 36/288 (12%), Positives = 79/288 (27%), Gaps = 28/288 (9%)

Query: 4   LPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDM-YDFQND 62
           +P  R S   TH+S                   Q+     Q+ +G R   +       N 
Sbjct: 21  IPLARISIPGTHDSGTFKLQNPIKQVWG---MTQEYDFRYQMDHGARIFDIRGRLTDDNT 77

Query: 63  IWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDA 122
           I L H                   + E + FL+ NP+E + + ++       G    F +
Sbjct: 78  IVLHHGPLYLY-------VTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSS 130

Query: 123 ADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTSKSAKEASEGIAYQWRYVVENQY 182
              +KY+     +   G     + D   +   L  ++  +         +          
Sbjct: 131 TFEKKYFVDPIFLKTEG--NIKLGDARGKIVLLKRYSGSNEPGGYNNFYWPDNETFTTTV 188

Query: 183 GDGGM-------------KVGSCPNRAESSPMNTRSKSLVLVNYFPDMPVLPLAC--KDN 227
                             KV S  +  + +  N+   + + +N+                
Sbjct: 189 NQNANVTVQEKYKVSYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYYY 248

Query: 228 SAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNGRLV 275
           ++ +   ++   +        ++  D+          + V   N  L+
Sbjct: 249 ASYINPEIANYIKQKNPARVGWVIQDYINEKWSPLLYQEVIRANKSLI 296
>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
d2plca_274 Phosphatidylinositol-specific phospholipase C {Lis 100.0
d2ptda_296 Phosphatidylinositol-specific phospholipase C {Bac 100.0
d1qasa3327 Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n 98.48
d2zkmx4349 Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI 98.23
>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Bacterial PLC
domain: Phosphatidylinositol-specific phospholipase C
species: Listeria monocytogenes [TaxId: 1639]

Probab=100.00  E-value=3.7e-39  Score=292.31  Aligned_cols=248  Identities=16%  Similarity=0.204  Sum_probs=166.0

Q ss_pred             CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeecccceeCCceEEEecCCCCCCCCCCcccc
Q 036538            3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQP   82 (299)
Q Consensus         3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~~~~l~~~H~~~~~C~~~~~~~~~   82 (299)
                      ++||++|+|||||||+++........ ...|+.||..+|++||++||||||||++   +++++||+.   |..    ..+
T Consensus        13 ~~~l~~l~ipGtHnS~~~~~~~~~~~-~~~~~~tQ~~~i~~QL~~GvR~~dlr~~---~~~~~~Hg~---~~~----~~~   81 (274)
T d2plca_          13 TTNLAALSIPGTHDTMSYNGDITWTL-TKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP---IFL----NAS   81 (274)
T ss_dssp             TCBGGGSEEEEETTTTTTSCSHHHHH-THHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---EEE----EEE
T ss_pred             CcEeeheecccccccccccCCCCCcc-cccccccccccHHHHHHhCCeEEEeeeC---CceEEEEEe---ecc----cee
Confidence            68999999999999999865421111 1237899999999999999999999984   789999986   432    368


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEeecccccCcchhhhhhhc--cCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEEEEEe
Q 036538           83 AKNVLEEVQAFLEANPAEIVTLFIEDYVTSPNGLTKVFDA--ADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVFTS  160 (299)
Q Consensus        83 l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~~~l~~~f~~--~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvvvf~~  160 (299)
                      +.++|++|++||++||+|||||+|++.....+.+..+++.  +.+++++|++.... ....||||+||+  ||+||++..
T Consensus        82 ~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ptl~e~~--gk~vi~~~~  158 (274)
T d2plca_          82 LSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTD-TSNKIPTLKDVR--GKILLLSEN  158 (274)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSC-CCCCCCBTTTTT--TCEEEEEES
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCcccc-ccCCCCChHHhC--CCEEEEecC
Confidence            9999999999999999999999998532233344444332  45788998754332 246899999995  887777654


Q ss_pred             CCccc-----cccCccccc-ceeeeCCCCCCCCCcCCCC-CCCCCCCCCccCccceeeccCCCCCC----ccccccCCCh
Q 036538          161 KSAKE-----ASEGIAYQW-RYVVENQYGDGGMKVGSCP-NRAESSPMNTRSKSLVLVNYFPDMPV----LPLACKDNSA  229 (299)
Q Consensus       161 ~~~~~-----~~~~~~~~~-~~~~e~~~~~~~~~~~~C~-~R~~~~~~~~~~~~l~l~Nhf~~~P~----~~~a~~~n~~  229 (299)
                      .....     ...++.+.+ .+.+++.|+.+......+. .+... ........ +.+||+..++-    ...|...|. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~in~~s~~~~~~~p~~~A~~~n~-  235 (274)
T d2plca_         159 HTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAY-QASKADNK-LFLNHISATSLTFTPRQYAAALNN-  235 (274)
T ss_dssp             TTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHH-HHHHCSSS-EEEEECCCBCSSSCHHHHHHHHHH-
T ss_pred             CcccccccccCccCccCCCCCceeeccCCCCchhhhHHHHHHHHH-hccccCCc-eEEEEEecCCCCCCHHHHHHHHhH-
Confidence            33211     112333333 6788999987653211110 00000 00011234 44577644321    222333332 


Q ss_pred             hHHHHHHHhHhhhCCCCceEEEEeccccCCCCChHHHHHHhcC
Q 036538          230 PLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNG  272 (299)
Q Consensus       230 ~L~~~~~~C~~~~g~r~pNfv~vDf~~~~~~g~~~~~v~~lN~  272 (299)
                      .+...+..|...++ |+||||++||++.    +++++|+++|.
T Consensus       236 ~i~~~~~~~~~~~~-~~~niV~~DFv~~----~~v~~vI~~N~  273 (274)
T d2plca_         236 KVEQFVLNLTSEKV-RGLGILIMDFPEK----QTIKNIIKNNK  273 (274)
T ss_dssp             HHHHHHHHHHHTTC-CCCEEEEESSCCH----HHHHHHHTTSC
T ss_pred             HHHHHHHHHhhcCC-CCCcEEEEcCCCc----hHHHHHHHHcC
Confidence            45667788887764 6799999999963    59999999996
>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure