Citrus Sinensis ID: 036539
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 749 | 2.2.26 [Sep-21-2011] | |||||||
| F4K5W8 | 836 | Sucrose synthase 5 OS=Ara | yes | no | 0.991 | 0.888 | 0.753 | 0.0 | |
| Q9FX32 | 942 | Sucrose synthase 6 OS=Ara | no | no | 1.0 | 0.795 | 0.736 | 0.0 | |
| Q7XNX6 | 855 | Sucrose synthase 7 OS=Ory | yes | no | 1.0 | 0.876 | 0.710 | 0.0 | |
| H6TFZ4 | 855 | Sucrose synthase 5 OS=Ory | yes | no | 1.0 | 0.876 | 0.709 | 0.0 | |
| Q6K973 | 846 | Sucrose synthase 6 OS=Ory | no | no | 0.994 | 0.880 | 0.701 | 0.0 | |
| Q9M111 | 809 | Sucrose synthase 3 OS=Ara | no | no | 0.998 | 0.924 | 0.591 | 0.0 | |
| O24301 | 809 | Sucrose synthase 2 OS=Pis | N/A | no | 0.998 | 0.924 | 0.588 | 0.0 | |
| Q10LP5 | 809 | Sucrose synthase 4 OS=Ory | no | no | 0.995 | 0.922 | 0.591 | 0.0 | |
| P13708 | 805 | Sucrose synthase OS=Glyci | no | no | 0.993 | 0.924 | 0.584 | 0.0 | |
| Q01390 | 805 | Sucrose synthase OS=Vigna | N/A | no | 0.993 | 0.924 | 0.582 | 0.0 |
| >sp|F4K5W8|SUS5_ARATH Sucrose synthase 5 OS=Arabidopsis thaliana GN=SUS5 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1182 bits (3057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/749 (75%), Positives = 649/749 (86%), Gaps = 6/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL++LMDE+ VI+D R +V+EG LG ILC TQ AVV+PP+VAFA+R PG W++VK
Sbjct: 38 MKLNELMDEMEIVINDVTQRRRVMEGDLGKILCFTQ-AVVIPPNVAFAVRGTPGNWQYVK 96
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS +LSVEA++ T +LK KE +FDE+WA DENALEVDFGA +F+LP L+LSSSIGNG+S
Sbjct: 97 VNSSNLSVEALSSTQYLKLKEFLFDENWANDENALEVDFGALDFTLPWLSLSSSIGNGLS 156
Query: 121 FVSKFVTAKLSGR-QDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLST 179
FVS +KL GR D Q LVDYLLSL+HQGEKLM+N+ LNTA KL+M+LI+A+V LS
Sbjct: 157 FVS----SKLGGRLNDNPQSLVDYLLSLEHQGEKLMMNETLNTARKLEMSLILADVFLSE 212
Query: 180 LPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILF 239
LPKDTP+Q FELRFKE GFEKGWG +A RV+ETMR LSE+LQAPDP ++++F + +P +F
Sbjct: 213 LPKDTPFQAFELRFKECGFEKGWGESAGRVKETMRILSEILQAPDPQNIDRFFARVPRIF 272
Query: 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTR 299
NVVIFS HGYFGQ DVLGLPDTGGQVVYILDQVKALE+ELL RI QGL KPQI+VVTR
Sbjct: 273 NVVIFSVHGYFGQTDVLGLPDTGGQVVYILDQVKALEDELLQRINSQGLNFKPQILVVTR 332
Query: 300 LIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359
LIPDA+ TKCNQELEPI GTK+SNILR+PF T+ GIL RWVSRFD+YPYLE F +DATT
Sbjct: 333 LIPDAKKTKCNQELEPIFGTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTKDATTK 392
Query: 360 ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419
IL+ L GKPDLIIGNY+DGNLVAS+MA+KLGITQATIAHALEKTKYEDSD+KWKE DPKY
Sbjct: 393 ILDILEGKPDLIIGNYTDGNLVASLMANKLGITQATIAHALEKTKYEDSDIKWKEFDPKY 452
Query: 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479
HFS QF AD I+MN+ DFIIAST+QEIAGSK+R GQYESH +FT+PGL RVV GI+V DP
Sbjct: 453 HFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQYESHMSFTVPGLYRVVSGINVFDP 512
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMA 539
+FNIAAPGAD S+YFP+T + RR TKF+ I+ELLY++ +N+EHIGYL D+KKPIIFSMA
Sbjct: 513 RFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDELLYSQSENDEHIGYLVDKKKPIIFSMA 572
Query: 540 RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599
RLDVVKNLTGLTEWY KNKRLR+LVNLVIVG FFD SKSKDREE +EIKKMH+L+EKYQL
Sbjct: 573 RLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDASKSKDREEISEIKKMHSLIEKYQL 632
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
KGQ RWI AQ+DR RNGELYR IADT+GAFVQPA YEAFGLTVIEAM+CGL TFATNQGG
Sbjct: 633 KGQFRWITAQTDRTRNGELYRSIADTRGAFVQPAHYEAFGLTVIEAMSCGLVTFATNQGG 692
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIVDGVSGFHIDP NG+ESSDKIADFFE +DP YWN FS EGL+RINECYTWKIY
Sbjct: 693 PAEIIVDGVSGFHIDPSNGEESSDKIADFFEKSGMDPDYWNMFSNEGLQRINECYTWKIY 752
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYI 748
ANK++NMG YS+W+ LNK QKLAKQRYI
Sbjct: 753 ANKVINMGSTYSYWRHLNKDQKLAKQRYI 781
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Functions in callose synthesis at the site of phloem sieve elements. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|Q9FX32|SUS6_ARATH Sucrose synthase 6 OS=Arabidopsis thaliana GN=SUS6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/749 (73%), Positives = 632/749 (84%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MK LM+E+ + I+D R+++LEGL GYIL TQEA V+PP VA A RPNPGFWE+VK
Sbjct: 45 MKREHLMNEIEKCIEDSRERSKILEGLFGYILTCTQEAAVVPPFVALAARPNPGFWEYVK 104
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS DL+V+ IT TD+LK KE VFDE W+KDENALE+DFGA +F+ P+L+LSSSIG G
Sbjct: 105 VNSGDLTVDEITATDYLKLKESVFDESWSKDENALEIDFGAIDFTSPRLSLSSSIGKGAD 164
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
++SKF+++KL G+ D +PL++YLL L+H GE LMIND+LNT KLQ +L++A + +ST
Sbjct: 165 YISKFISSKLGGKSDKLEPLLNYLLRLNHHGENLMINDDLNTVAKLQKSLMLAVIVVSTY 224
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
K TPY+ F R KE GFEKGWG TAERV+ETM LSEVL+APD ++ S LP +FN
Sbjct: 225 SKHTPYETFAQRLKEMGFEKGWGDTAERVKETMIILSEVLEAPDNGKLDLLFSRLPTVFN 284
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFS HGYFGQ DVLGLPDTGGQVVYILDQV+ALEEELL+RI QQGL KPQI+VVTRL
Sbjct: 285 VVIFSVHGYFGQQDVLGLPDTGGQVVYILDQVRALEEELLIRINQQGLGFKPQILVVTRL 344
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+ARGTKC+QELE IEGTKHS+ILRVPF T+KG+L +WVSRFD+YPYLE F QDAT+ I
Sbjct: 345 IPEARGTKCDQELEAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQDATSKI 404
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ L KPDLIIGNY+DGNLVAS+MA+KLG+TQ TIAHALEKTKYEDSD KWKELDPKYH
Sbjct: 405 LQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTKYEDSDAKWKELDPKYH 464
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN TDFII ST+QEIAGSKDRPGQYESHTAFT+PGLCRVV GIDV DPK
Sbjct: 465 FSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGIDVFDPK 524
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEK +R TKFHP I+ELLYN++DN EH+GYLADR+KPIIFSMAR
Sbjct: 525 FNIAAPGADQSVYFPYTEKDKRFTKFHPSIQELLYNEKDNAEHMGYLADREKPIIFSMAR 584
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKN+TGL EWYGK+KRLR + NLV+V FFD SKS DREE AEIKKMH L+EKY+LK
Sbjct: 585 LDTVKNITGLVEWYGKDKRLREMANLVVVAGFFDMSKSNDREEKAEIKKMHDLIEKYKLK 644
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
G+ RWIAAQ+DR RN ELYRCIADTKG FVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 645 GKFRWIAAQTDRYRNSELYRCIADTKGVFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 704
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP NGDES KI DFF C+ D YW+ S GLKRI ECYTWKIYA
Sbjct: 705 AEIIVDGVSGFHIDPNNGDESVTKIGDFFSKCRSDGLYWDNISKGGLKRIYECYTWKIYA 764
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
K+L MG +Y FW+Q+N+ QK AK+RYIE
Sbjct: 765 EKLLKMGSLYGFWRQVNEDQKKAKKRYIE 793
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Functions in callose synthesis at the site of phloem sieve elements. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q7XNX6|SUS7_ORYSJ Sucrose synthase 7 OS=Oryza sativa subsp. japonica GN=SUS7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/750 (71%), Positives = 644/750 (85%), Gaps = 1/750 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
+K LM+EL + +DD+ +++EG LGYI+CSTQEAVV+PP VAFA+R NPG WE+VK
Sbjct: 43 LKNQQLMEELEKSLDDKVENEKLVEGFLGYIICSTQEAVVLPPFVAFAVRMNPGIWEYVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+SDDLSVE IT +++LKFKE ++DE WAKD+N+LEVDFGA + S P LTL SSIGNG+
Sbjct: 103 VHSDDLSVEGITPSEYLKFKETLYDEKWAKDDNSLEVDFGALDLSTPHLTLPSSIGNGLQ 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF+++KL G+ + +PL+DYLL+L+++GEKLMIND ++T KLQ AL++AEV +S L
Sbjct: 163 FVSKFMSSKLGGKPESMKPLLDYLLTLNYRGEKLMINDTIDTVSKLQTALLLAEVFVSGL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PK TPY KFE RF+EWG EKGWG TAER +ET+ LSEVLQAPDP +MEKF S +P +FN
Sbjct: 223 PKYTPYLKFEQRFQEWGLEKGWGDTAERCKETLNCLSEVLQAPDPTNMEKFFSRVPSIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
+VIFS HGYFGQ VLGLPDTGGQVVYILDQV+A+EEELL RIKQQGL++ P+I+V+TRL
Sbjct: 283 IVIFSIHGYFGQEKVLGLPDTGGQVVYILDQVRAMEEELLQRIKQQGLHVTPKILVLTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGI-LHRWVSRFDVYPYLEGFAQDATTM 359
IPDA+GTKCN ELEP+E TK+S+ILRVPFKT+ G L +WVSRFD+YPYLE +AQ++
Sbjct: 343 IPDAKGTKCNVELEPVENTKYSHILRVPFKTEDGKDLRQWVSRFDIYPYLERYAQNSCAK 402
Query: 360 ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419
IL+ L GKPDLIIGNY+DGNLVAS++++KL +TQ TIAHALEKTKYEDSDVKW+E+D KY
Sbjct: 403 ILDILEGKPDLIIGNYTDGNLVASLLSNKLCVTQGTIAHALEKTKYEDSDVKWREMDQKY 462
Query: 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479
HFSCQF AD I+MN +DFII ST+QEIAGSK++PGQYE H AFT+PGLCR GI+V DP
Sbjct: 463 HFSCQFTADMISMNTSDFIITSTYQEIAGSKEKPGQYEHHYAFTMPGLCRYATGINVFDP 522
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMA 539
KFNIAAPGADQS+YFP+T+KQ+RLT HP+I+ELLY+K+D +EHIGYLADR KPIIFSMA
Sbjct: 523 KFNIAAPGADQSIYFPFTQKQKRLTDLHPQIDELLYSKDDTDEHIGYLADRNKPIIFSMA 582
Query: 540 RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599
RLD VKN+TGL EWYG+NK+LR+LVNLV+V D S+SKDREE EI KMH LM++YQL
Sbjct: 583 RLDKVKNITGLVEWYGQNKKLRDLVNLVVVAGLLDASQSKDREEIEEINKMHNLMDRYQL 642
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
KGQ+RWI AQ+DR+RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG
Sbjct: 643 KGQIRWIKAQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 702
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEII+DGVSGFH++P NG E+ KIADFF+ CK DP+YWNK ST GL+RI ECYTWKIY
Sbjct: 703 PAEIIIDGVSGFHVNPINGREAGIKIADFFQKCKEDPSYWNKVSTAGLQRIYECYTWKIY 762
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
A ++LNMG YSFWK LNK ++ AKQRY++
Sbjct: 763 ATRVLNMGSTYSFWKTLNKEERQAKQRYLQ 792
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|H6TFZ4|SUS5_ORYSJ Sucrose synthase 5 OS=Oryza sativa subsp. japonica GN=SUS5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/750 (70%), Positives = 644/750 (85%), Gaps = 1/750 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
+K LM+EL + +DD+ + +++EG LGYI+CSTQEAVV+PP VAFA+R NPG WE+VK
Sbjct: 43 LKNQQLMEELEKSLDDKVEKEKLVEGFLGYIICSTQEAVVLPPFVAFAVRMNPGIWEYVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+SDDLSVE IT +++LKFKE ++DE WAKD+N+LEVDFGA + S P LTL SSIGNG+
Sbjct: 103 VHSDDLSVEGITPSEYLKFKETLYDEKWAKDDNSLEVDFGALDLSTPHLTLPSSIGNGLQ 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF+++KL G+ + +PL+DYLL+L+++GEKLMIND ++T KLQ AL++AEV +S L
Sbjct: 163 FVSKFMSSKLGGKPESMKPLLDYLLTLNYRGEKLMINDTIDTVSKLQTALLLAEVFVSGL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PK TPY KFE RF+EWG E+GWG TAER +ET+ LSEVLQAPDP +MEKF S +P +FN
Sbjct: 223 PKYTPYLKFEQRFQEWGLERGWGDTAERCKETLNCLSEVLQAPDPTNMEKFFSRVPSIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
+VIFS HGYFGQ VLGLPDTGGQVVYILDQV+A+EEELL RIKQQGL++ P+I+V+TRL
Sbjct: 283 IVIFSIHGYFGQEKVLGLPDTGGQVVYILDQVRAMEEELLQRIKQQGLHVTPKILVLTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGI-LHRWVSRFDVYPYLEGFAQDATTM 359
IPDA+GTKCN ELEP+E TK+S+ILRVPFKT+ G L +WVSRFD+YPYLE +AQD+
Sbjct: 343 IPDAKGTKCNVELEPVENTKYSHILRVPFKTEDGKDLRQWVSRFDIYPYLERYAQDSCAK 402
Query: 360 ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419
IL+ L GKPDLIIGNY+DGNLVAS++++KL +TQ TIAHALEKTKYEDSDVKW+E+D KY
Sbjct: 403 ILDILEGKPDLIIGNYTDGNLVASLLSNKLCVTQGTIAHALEKTKYEDSDVKWREMDQKY 462
Query: 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479
HFSCQF AD I+MN +DFII ST+QEIAGSK++PGQYE H AFT+PGLCR GI+V DP
Sbjct: 463 HFSCQFTADMISMNTSDFIITSTYQEIAGSKEKPGQYEHHYAFTMPGLCRYATGINVFDP 522
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMA 539
KFNIAAPGADQS+YFP+T+KQ+RLT HP+I+ELLY+K+D +EHIGYLADR KPIIFSMA
Sbjct: 523 KFNIAAPGADQSIYFPFTQKQKRLTDLHPQIDELLYSKDDTDEHIGYLADRNKPIIFSMA 582
Query: 540 RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599
RLD VKN+TGL EWYG+NK+LR+LVNLV+V D S+SKDREE EI KMH LM++YQL
Sbjct: 583 RLDKVKNITGLVEWYGQNKKLRDLVNLVVVAGLLDASQSKDREEIEEINKMHNLMDRYQL 642
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
KGQ+RWI AQ+DR+RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG
Sbjct: 643 KGQIRWIKAQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 702
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEII+DGVSGFH++P N E+ KIADFF+ CK DP+YWNK ST GL+RI ECYTWKIY
Sbjct: 703 PAEIIIDGVSGFHVNPINDREAGIKIADFFQKCKEDPSYWNKVSTAGLQRICECYTWKIY 762
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
A ++LNMG YSFWK LNK ++ AKQRY++
Sbjct: 763 ATRVLNMGSTYSFWKTLNKEERQAKQRYLQ 792
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q6K973|SUS6_ORYSJ Sucrose synthase 6 OS=Oryza sativa subsp. japonica GN=SUS6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/751 (70%), Positives = 632/751 (84%), Gaps = 6/751 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MK L+DEL++ +DD+ + Q+L+G LGY++ STQEA V+PP VAFA+R NPG WEFVK
Sbjct: 41 MKRQQLLDELDKSVDDKADKDQLLQGFLGYVISSTQEAAVLPPFVAFAVRMNPGIWEFVK 100
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAK--DENALEVDFGAYEFSLPQLTLSSSIGNG 118
V+S +LSVE +T +D+LK KE + D+ W D++ LEVDFGA + S P LTL SSIG G
Sbjct: 101 VHSANLSVEQMTPSDYLKNKEALVDDKWGAYDDDSQLEVDFGALDLSTPHLTLPSSIGKG 160
Query: 119 ISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLS 178
VS+F+++KL+ D +PL+DYLL+L H+G+KLMIND L+T +KLQ AL++AEV ++
Sbjct: 161 AHLVSRFMSSKLT---DNKKPLLDYLLALSHRGDKLMINDILDTVDKLQTALLLAEVYVA 217
Query: 179 TLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPIL 238
L DT Y +FE +F+EWG EKGWG TAE +ET+ SLSEVLQAPDP++MEKF S++P +
Sbjct: 218 GLHPDTNYSEFEQKFQEWGLEKGWGDTAETCKETLSSLSEVLQAPDPINMEKFFSTVPCV 277
Query: 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVT 298
F VVIFS HGYFGQ VLG+PDTGGQVVYILDQV+ALE+ELL RIKQQGL P+I+V+T
Sbjct: 278 FTVVIFSIHGYFGQEKVLGMPDTGGQVVYILDQVRALEDELLQRIKQQGLNATPKILVLT 337
Query: 299 RLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKG-ILHRWVSRFDVYPYLEGFAQDAT 357
RLIP+A+GTKCN ELEPIE TKHSNILRVPFKT+ G +L +WVSRFD+YPYLE +AQD++
Sbjct: 338 RLIPEAKGTKCNVELEPIENTKHSNILRVPFKTEDGKVLPQWVSRFDIYPYLERYAQDSS 397
Query: 358 TMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDP 417
ILE L GKPDL+IGNY+DGNLVAS++ SKLG+TQ TIAHALEKTKYEDSD+KW+ELD
Sbjct: 398 VKILEILEGKPDLVIGNYTDGNLVASLLTSKLGVTQGTIAHALEKTKYEDSDIKWRELDH 457
Query: 418 KYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477
KYHFSCQF AD IAMN +DFIIAST+QEIAGSK++PGQYESH AFT+PGLCR GI+V
Sbjct: 458 KYHFSCQFTADMIAMNTSDFIIASTYQEIAGSKEKPGQYESHYAFTMPGLCRYATGINVF 517
Query: 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFS 537
DPKFNIAAPGADQSVYFP+T+KQ+RLT HP+IEELLY+KEDNNEHIG+LADR KPIIFS
Sbjct: 518 DPKFNIAAPGADQSVYFPFTQKQKRLTDLHPQIEELLYSKEDNNEHIGHLADRSKPIIFS 577
Query: 538 MARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597
MARLD +KN+TGL EWYG+NKRLR+LVNLVIVG DPS+SKDREE EI KMH+L+ KY
Sbjct: 578 MARLDKIKNITGLVEWYGQNKRLRDLVNLVIVGGLLDPSQSKDREEIEEINKMHSLINKY 637
Query: 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 657
QL GQ+RWI Q+DR+RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ
Sbjct: 638 QLVGQIRWIKGQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 697
Query: 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717
GGPAEIIVD VSGFHI+P NG E+SDKIADFF+ CK D YW+K ST GL+RI ECYTW+
Sbjct: 698 GGPAEIIVDEVSGFHINPLNGKEASDKIADFFQKCKEDLIYWSKMSTAGLQRIYECYTWQ 757
Query: 718 IYANKMLNMGCMYSFWKQLNKGQKLAKQRYI 748
IYA K+LNM +Y FW+ L+K ++ AKQ Y+
Sbjct: 758 IYATKVLNMASIYGFWRTLDKEERQAKQHYL 788
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q9M111|SUS3_ARATH Sucrose synthase 3 OS=Arabidopsis thaliana GN=SUS3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/749 (59%), Positives = 576/749 (76%), Gaps = 1/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H+L+DEL VI D++ + + +G G IL S EA+V+PP VA A+RP PG WE+V+
Sbjct: 42 LQPHNLIDELESVIGDDETKKSLSDGPFGEILKSAMEAIVVPPFVALAVRPRPGVWEYVR 101
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +LSVE +TV+++L+FKE + D D LE+DF + ++P+ + SSSIGNG+
Sbjct: 102 VNVFELSVEQLTVSEYLRFKEELVDGP-NSDPFCLELDFEPFNANVPRPSRSSSIGNGVQ 160
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++ + +DC +PL+D+L ++G LM+ND + + +LQ+ L AE +S L
Sbjct: 161 FLNRHLSSVMFRNKDCLEPLLDFLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKL 220
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
++TP+ +FE + GFEKGWG TA RV E M LS++LQAPDP +EKFL +P++FN
Sbjct: 221 SQETPFSEFEYALQGMGFEKGWGDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFN 280
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYFGQA+VLGLPDTGGQVVYILDQV+ALE E+LLRIK+QGL I P I++VTRL
Sbjct: 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRL 340
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDA+GT CNQ LE + GT+H++ILRVPF+++KGIL +W+SRFDV+PYLE +AQDA + I
Sbjct: 341 IPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEI 400
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
+ L G PD IIGNYSDGNLVAS+MA ++G+TQ TIAHALEKTKY DSD+ WK+ D KYH
Sbjct: 401 VGELQGVPDFIIGNYSDGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYH 460
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN DFII ST+QEIAG+K+ GQYESH AFTLPGL RVV GIDV DPK
Sbjct: 461 FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPK 520
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD ++YFPY+E+ RRLT H IEE+LY+ + +EH+G L+DR KPI+FSMAR
Sbjct: 521 FNIVSPGADMTIYFPYSEETRRLTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMAR 580
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKN++GL E Y KN +LR LVNLV++ D +KSKDREE EI+KMH LM+ Y+L
Sbjct: 581 LDKVKNISGLVEMYSKNTKLRELVNLVVIAGNIDVNKSKDREEIVEIEKMHNLMKNYKLD 640
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWI AQ++R RNGELYR IADT+GAF QPA YEAFGLTV+EAM CGLPTFAT GGP
Sbjct: 641 GQFRWITAQTNRARNGELYRYIADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEII G+SGFHIDPY+ +++ + +ADFFE CK DP +W K S GL+RI E YTWKIY+
Sbjct: 701 AEIIEHGLSGFHIDPYHPEQAGNIMADFFERCKEDPNHWKKVSDAGLQRIYERYTWKIYS 760
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+++ + +Y FWK ++K ++ +RY+E
Sbjct: 761 ERLMTLAGVYGFWKYVSKLERRETRRYLE 789
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Modulates metabolic homeostasis and direct carbon towards starch synthesis in developing seeds. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/749 (58%), Positives = 570/749 (76%), Gaps = 1/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H+L+DEL+ ++ ++ + G G I+ S QEA+V+PP VA A+RP PG WE+V+
Sbjct: 43 LQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVR 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +LSVE ++V+++L FKE + E + D LE+D + S P+ T SSSIGNG+
Sbjct: 103 VNVFELSVEQLSVSEYLSFKEELV-EGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQ 161
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++ + +DC +PL+D+L ++G LM+ND + + KLQ AL+ AE LS L
Sbjct: 162 FLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKL 221
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
DT Y +FE + GFE+GWG TA RV E M L ++LQAPDP +E FL +P++FN
Sbjct: 222 APDTLYSEFEYELQGTGFERGWGDTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFN 281
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHG+FGQA+VLGLPDTGGQVVYILDQV+ALE E+L+RIK+QGL P+I++VTRL
Sbjct: 282 VVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALESEMLVRIKKQGLDFTPRILIVTRL 341
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDA+GT CNQ LE + GT++++ILRVPF+++KGIL +W+SRFDV+P+LE FA+D + I
Sbjct: 342 IPDAKGTTCNQRLERVSGTEYTHILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEI 401
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L PD IIGNYSDGNLVAS++A K+G+TQ TIAHALEKTKY DSD+ WK+ + KYH
Sbjct: 402 AAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYH 461
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN DFII ST+QEIAG+K+ GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 462 FSCQFTADLIAMNNADFIITSTYQEIAGTKNTIGQYESHTAFTLPGLYRVVHGIDVFDPK 521
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD ++YFPY++K++RLT H IE+LLY E +E+IG L DR KPIIFSMAR
Sbjct: 522 FNIVSPGADMTIYFPYSDKEKRLTALHSSIEKLLYGTEQTDEYIGSLTDRSKPIIFSMAR 581
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKN+TGL E Y KN +LR LVNLV+V + D KS DREE EI+KMH LM++Y L
Sbjct: 582 LDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLN 641
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
G+ RWI AQ++R RNGELYR IADTKGAFVQPA YEAFGLTV+EAM CGLPTFATN GGP
Sbjct: 642 GEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGP 701
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEII GVSGFHIDPY+ D++S+ + DFF+ CK DP +WNK S GL+RI E YTWKIY+
Sbjct: 702 AEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYS 761
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+++ + +YSFWK ++K ++ +RY+E
Sbjct: 762 ERLMTLAGVYSFWKYVSKLERRETRRYLE 790
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q10LP5|SUS4_ORYSJ Sucrose synthase 4 OS=Oryza sativa subsp. japonica GN=SUS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/749 (59%), Positives = 565/749 (75%), Gaps = 3/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H ++D L+EV ++EG +L S QEA+V+PP VA A+RP PG WE+V+
Sbjct: 42 LQPHHILDALDEV--QSSGGRALVEGPFLDVLRSAQEAIVLPPFVAIAVRPRPGVWEYVR 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +LSVE +TV+++L+FKE + D + D LE+DF + S+P+ SSSIGNG+
Sbjct: 100 VNVHELSVEQLTVSEYLRFKEELVDGQY-NDPYILELDFEPFNASVPRPNRSSSIGNGVQ 158
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++ + +DC +PL+D+L H+G +M+ND + + +LQ L AE LS L
Sbjct: 159 FLNRHLSSIMFRNKDCLEPLLDFLRGHRHKGHVMMLNDRIQSLGRLQSVLTKAEEHLSKL 218
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
P DTPY +F +F+EWG EKGWG TA V E + L +VLQAPDP +E FL +P++FN
Sbjct: 219 PADTPYSQFAYKFQEWGLEKGWGDTAGYVLEMIHLLLDVLQAPDPSTLETFLGRIPMIFN 278
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VV+ SPHGYFGQA+VLGLPDTGGQ+VYILDQV+ALE E++LR+K+QGL P+I++VTRL
Sbjct: 279 VVVVSPHGYFGQANVLGLPDTGGQIVYILDQVRALENEMVLRLKKQGLDFTPKILIVTRL 338
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+A+GT CNQ LE I GT+H+ ILRVPF+ + GIL +W+SRFDV+PYLE FA+DA I
Sbjct: 339 IPEAKGTSCNQRLERISGTQHTYILRVPFRNENGILRKWISRFDVWPYLEKFAEDAAGEI 398
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L G PD IIGNYSDGNLVAS+++ K+GITQ IAHALEKTKY DSD+ W + D KYH
Sbjct: 399 AAELQGTPDFIIGNYSDGNLVASLLSYKMGITQCNIAHALEKTKYPDSDIYWTKYDEKYH 458
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN DFII ST+QEIAGSK+ GQYESHTAFTLPGL R+V GIDV DPK
Sbjct: 459 FSCQFTADIIAMNNADFIITSTYQEIAGSKNTVGQYESHTAFTLPGLYRIVHGIDVFDPK 518
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD S+YFPYTEK +RLT H +E L+ + E N+EHIG+L DR KPI+FSMAR
Sbjct: 519 FNIVSPGADMSIYFPYTEKAKRLTSLHGSLENLISDPEQNDEHIGHLDDRSKPILFSMAR 578
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKN+TGL E Y KN RLR LVNLV+V + D KSKDREE AEI+KMH L++ Y L
Sbjct: 579 LDRVKNITGLVEAYAKNARLRELVNLVVVAGYNDVKKSKDREEIAEIEKMHELIKTYNLF 638
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWI+AQ++R RNGELYR IADT GAFVQPA YEAFGLTV+EAM CGLPTFAT GGP
Sbjct: 639 GQFRWISAQTNRARNGELYRYIADTHGAFVQPAFYEAFGLTVVEAMTCGLPTFATVHGGP 698
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEII G+SGFHIDPY+ D++++ IADFFE CK DP +W + S GL+RI E YTWKIY+
Sbjct: 699 AEIIEHGISGFHIDPYHPDQAANLIADFFEQCKQDPNHWVEVSNRGLQRIYEKYTWKIYS 758
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+++ + +Y FWK ++K ++ +RY+E
Sbjct: 759 ERLMTLAGVYGFWKYVSKLERRETRRYLE 787
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function description |
|---|
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/750 (58%), Positives = 568/750 (75%), Gaps = 6/750 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H ++ E E+ E+ R ++ +G G +L STQEA+V+PP VA A+RP PG WE+++
Sbjct: 42 LQHHQVIAEFEEI--PEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLR 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN L VE + ++L FKE + D + LE+DF + + P+ TL+ SIGNG+
Sbjct: 100 VNVHALVVEELQPAEYLHFKEELVDGS-SNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQ 158
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ ++AKL ++ PL+++L +G+ LM+ND + + LQ L AE L T+
Sbjct: 159 FLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTV 218
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
P +TPY +FE +F+E G E+GWG AERV E+++ L ++L+APDP +E FL +P++FN
Sbjct: 219 PPETPYSEFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFN 278
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYF Q +VLG PDTGGQVVYILDQV+ALE E+L RIKQQGL I P+I+++TRL
Sbjct: 279 VVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRL 338
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+PDA GT C Q LE + GT+HS+ILRVPF+T+KGI+ +W+SRF+V+PYLE + +D +
Sbjct: 339 LPDAVGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEL 398
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
+ L GKPDLI+GNYSDGN+VAS++A KLG+TQ TIAHALEKTKY +SD+ WK+L+ +YH
Sbjct: 399 AKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYH 458
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD AMN TDFII STFQEIAGSKD GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 459 FSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGADQ++YFP+TE RRLT FHPEIEELLY+ +N EHI L DR KPIIF+MAR
Sbjct: 519 FNIVSPGADQTIYFPHTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMAR 578
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSK-SKDREETAEIKKMHALMEKYQL 599
LD VKN+TGL EWYGKN +LR LVNLV+V D K SKD EE AE+KKM+ L+E Y+L
Sbjct: 579 LDRVKNITGLVEWYGKNAKLRELVNLVVVAG--DRRKESKDLEEKAEMKKMYGLIETYKL 636
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
GQ RWI++Q +R+RNGELYR I DT+GAFVQPA+YEAFGLTV+EAM CGLPTFAT GG
Sbjct: 637 NGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGG 696
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIV G SGFHIDPY+GD ++D + DFFE CK+DPT+W+K S GL+RI E YTW+IY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIY 756
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+ ++L + +Y FWK ++ + +RY+E
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRRESRRYLE 786
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q01390|SUSY_VIGRR Sucrose synthase OS=Vigna radiata var. radiata GN=SS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/750 (58%), Positives = 567/750 (75%), Gaps = 6/750 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H ++ E E+ E+ R ++ +G G +L STQEA+V+PP VA A+RP PG WE+++
Sbjct: 42 LQHHQVIAEFEEI--PEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLR 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN L VE + ++L+FKE + D + LE+DF + S P+ TL+ SIGNG+
Sbjct: 100 VNVHALVVEVLQPAEYLRFKEELVDGS-SNGNFVLELDFEPFTASFPRPTLNKSIGNGVQ 158
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ ++AKL ++ PL+++L +G+ LM+ND + + LQ L AE L T+
Sbjct: 159 FLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTV 218
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
P +TPY FE +F+E G E+GWG AERV E+++ L ++L+APDP +E FL +P++FN
Sbjct: 219 PPETPYSAFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFN 278
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYF Q +VLG PDTGGQVVYILDQV+ALE E+L RIKQQGL I P+I+++TRL
Sbjct: 279 VVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRL 338
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+PDA GT C Q LE + GT+HS+ILRVPF+T+ GI+ +W+SRF+V+PYLE + +D +
Sbjct: 339 LPDAVGTTCGQRLEKVFGTEHSHILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHEL 398
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
+ L GKPDLI+GNYSDGN+VAS++A KLG+TQ TIAHALEKTKY +SD+ WK+L+ +YH
Sbjct: 399 AKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYH 458
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD AMN TDFII STFQEIAGSKD GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 459 FSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGADQ++YFP+TE RRLT FH EIEELLY+ +N EHI L DR KPIIF+MAR
Sbjct: 519 FNIVSPGADQTIYFPHTETSRRLTSFHTEIEELLYSSVENEEHICVLKDRSKPIIFTMAR 578
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSK-SKDREETAEIKKMHALMEKYQL 599
LD VKN+TGL EWYGKN +LR LVNLV+V D K SKD EE AE+KKM++L+E Y+L
Sbjct: 579 LDRVKNITGLVEWYGKNAKLRELVNLVVVAG--DRRKESKDLEEKAEMKKMYSLIETYKL 636
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
GQ RWI++Q +R+RNGELYR IADTKGAFVQPA+YEAFGLTV+EAM CGLPTFAT GG
Sbjct: 637 NGQFRWISSQMNRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGG 696
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIV G SGFHIDPY+GD ++D + +FFE KVDP++W+K S GL+RI E YTW+IY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIY 756
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+ ++L + +Y FWK ++ + +RY+E
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRRESRRYLE 786
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vigna radiata var. radiata (taxid: 3916) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 749 | ||||||
| 297738137 | 842 | unnamed protein product [Vitis vinifera] | 0.998 | 0.888 | 0.798 | 0.0 | |
| 356551983 | 840 | PREDICTED: sucrose synthase 2-like [Glyc | 1.0 | 0.891 | 0.803 | 0.0 | |
| 356499058 | 840 | PREDICTED: sucrose synthase 2-like [Glyc | 1.0 | 0.891 | 0.797 | 0.0 | |
| 359476487 | 846 | PREDICTED: sucrose synthase 2-like [Viti | 0.985 | 0.872 | 0.796 | 0.0 | |
| 313770767 | 835 | sucrose synthase 5 [Populus trichocarpa] | 0.986 | 0.885 | 0.803 | 0.0 | |
| 357491757 | 846 | Sucrose synthase [Medicago truncatula] g | 1.0 | 0.885 | 0.791 | 0.0 | |
| 224077386 | 818 | predicted protein [Populus trichocarpa] | 0.986 | 0.903 | 0.803 | 0.0 | |
| 392050922 | 824 | putative sucrose synthase 7 [Gossypium a | 0.990 | 0.900 | 0.796 | 0.0 | |
| 224134633 | 815 | predicted protein [Populus trichocarpa] | 0.986 | 0.906 | 0.798 | 0.0 | |
| 429326644 | 835 | sucrose synthase [Populus tomentosa] | 0.986 | 0.885 | 0.793 | 0.0 |
| >gi|297738137|emb|CBI27338.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/755 (79%), Positives = 680/755 (90%), Gaps = 7/755 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL+ LMDE+ VIDD++ RTQVLEG+LG+ILCSTQEAV +PPHV F+IR NPGFWE+VK
Sbjct: 43 MKLNHLMDEMEAVIDDKNERTQVLEGVLGFILCSTQEAVAIPPHVIFSIRSNPGFWEYVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+SDDLSVEAIT D+LKFKE+VFDE+WAKD+NALE++F A++F +P+LTLSSSIGNG+S
Sbjct: 103 VSSDDLSVEAITAADYLKFKEMVFDENWAKDDNALELNFSAFDFPMPRLTLSSSIGNGVS 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
VSKF+T+KL+G AQPLVDYLLSL+HQGEKLMI + LNT KLQMALIVAEV +S L
Sbjct: 163 LVSKFMTSKLNGNSQSAQPLVDYLLSLNHQGEKLMITNTLNTPTKLQMALIVAEVFVSAL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDTPY FELRFKEWGFEKGWG+TAERV+ETMRSLSE L+APDP++MEKFLS LP +FN
Sbjct: 223 PKDTPYPSFELRFKEWGFEKGWGNTAERVKETMRSLSEALEAPDPMNMEKFLSRLPTIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQ+DVLGLPDTGGQVVYILDQV+ALEEELLLRIK QGL +KPQI+VVTRL
Sbjct: 283 VVIFSPHGYFGQSDVLGLPDTGGQVVYILDQVRALEEELLLRIKLQGLNVKPQILVVTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQ------ 354
IPDARGTKCNQE EPI+ TKHS ILR+PF+T+KGIL++WVSRFD+YPYLE F Q
Sbjct: 343 IPDARGTKCNQEWEPIDNTKHSTILRIPFRTEKGILNQWVSRFDIYPYLERFTQASIITS 402
Query: 355 -DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWK 413
DAT I+E + GKPDLIIGNY+DGNLVAS+MA+KLGITQ TIAHALEKTKYEDSDVKWK
Sbjct: 403 MDATAKIIEHMEGKPDLIIGNYTDGNLVASLMATKLGITQGTIAHALEKTKYEDSDVKWK 462
Query: 414 ELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKG 473
EL+PKYHFSCQF ADTI+MNA DFII ST+QEIAGSKDRPGQYESHT+FTLPGLCRVV G
Sbjct: 463 ELEPKYHFSCQFTADTISMNAADFIITSTYQEIAGSKDRPGQYESHTSFTLPGLCRVVSG 522
Query: 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKP 533
I++ DPKFNIAAPGADQSVYFPY E+ +RLT F P IEELLY+K+DNNEHIG+LADRKKP
Sbjct: 523 INLFDPKFNIAAPGADQSVYFPYMERHKRLTSFQPAIEELLYSKQDNNEHIGFLADRKKP 582
Query: 534 IIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHAL 593
IIFSMARLD+VKN+TGLTEW+G NKRLR+LVNLVIV FFDPSKSKDREE AEIKKMH L
Sbjct: 583 IIFSMARLDIVKNITGLTEWFGNNKRLRSLVNLVIVAGFFDPSKSKDREEMAEIKKMHTL 642
Query: 594 MEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTF 653
+EKYQLKGQ+RWIAAQ+DR RNGELYRCIADTKGAFVQPA+YEAFGLTVIEAMNCGLPTF
Sbjct: 643 IEKYQLKGQIRWIAAQNDRRRNGELYRCIADTKGAFVQPAIYEAFGLTVIEAMNCGLPTF 702
Query: 654 ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713
ATNQGGPAEIIVDGVSGFHIDP GDESS+KIADFFE C+ D +WNK S GL+RINEC
Sbjct: 703 ATNQGGPAEIIVDGVSGFHIDPNIGDESSNKIADFFEKCRDDSDHWNKISKAGLQRINEC 762
Query: 714 YTWKIYANKMLNMGCMYSFWKQLNKGQKLAKQRYI 748
YTWKIYANK+LNMGC++SFW+QLN K AKQ+YI
Sbjct: 763 YTWKIYANKVLNMGCVFSFWRQLNTEHKQAKQKYI 797
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551983|ref|XP_003544351.1| PREDICTED: sucrose synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/749 (80%), Positives = 680/749 (90%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKLH LM+E+ VIDD+ R+QVLEG+LG+IL STQEAVV PP+VAFAIRP PG WEFVK
Sbjct: 43 MKLHHLMEEMELVIDDKSERSQVLEGILGFILSSTQEAVVDPPYVAFAIRPYPGVWEFVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+S+DLSVEAIT TD+LKFKE V DE WA DEN+ E DFGA++F +PQLTLSSSIGNG+
Sbjct: 103 VSSEDLSVEAITPTDYLKFKERVHDEKWATDENSFEADFGAFDFQIPQLTLSSSIGNGLQ 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F SKF+T+KL+G+ + Q +VDYLL+L+HQGE LMIN++LN++ KLQMAL+VA+ LS L
Sbjct: 163 FTSKFLTSKLTGKLEKTQAIVDYLLTLNHQGESLMINESLNSSAKLQMALVVADAFLSGL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDT YQ FELRFKEWGFE+GWG TA RV+ETMR+LSEVLQAPDP+++EKFLSSLPI+FN
Sbjct: 223 PKDTAYQNFELRFKEWGFERGWGDTAGRVKETMRTLSEVLQAPDPVNLEKFLSSLPIIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFS HGYFGQADVLGLPDTGGQVVYILDQVK+LE ELLLRIKQQGL +KPQI+VVTRL
Sbjct: 283 VVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKSLEAELLLRIKQQGLNVKPQILVVTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDARGTKC+QELEPI TKHS+ILRVPF+TDKGILH+W+SRFD+YPYLE F QDAT I
Sbjct: 343 IPDARGTKCHQELEPISDTKHSHILRVPFQTDKGILHQWISRFDIYPYLERFTQDATAKI 402
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
LEF+ GKPDL+IGNY+DGNLVAS+MA KLGITQ TIAHALEKTKYEDSDVKWKELDPKYH
Sbjct: 403 LEFMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYH 462
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF+ADT+AMNA+DFII ST+QEIAGSKDRPGQYESH AFTLPGLCRVV GI+V DPK
Sbjct: 463 FSCQFMADTVAMNASDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPK 522
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEK++RL++FHP IE+LL++K DN EHIGYLADR+KPIIFSMAR
Sbjct: 523 FNIAAPGADQSVYFPYTEKEKRLSQFHPAIEDLLFSKVDNIEHIGYLADRRKPIIFSMAR 582
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LDVVKNLTGL EWYGKNKRLRNLVNLVIVG FFDPSKSKDREE AEIK MH L++KYQLK
Sbjct: 583 LDVVKNLTGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKNMHDLIDKYQLK 642
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ++R RNGELYRCIADT+GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 643 GQFRWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 702
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP NGDESS+KIADFFE CK++ + WN S GL+RINECYTWKIYA
Sbjct: 703 AEIIVDGVSGFHIDPLNGDESSNKIADFFEKCKMNQSQWNVISAAGLQRINECYTWKIYA 762
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
NKM+NMG +Y+FW+Q+NK QK AKQRYI+
Sbjct: 763 NKMVNMGNIYTFWRQVNKEQKEAKQRYIQ 791
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499058|ref|XP_003518361.1| PREDICTED: sucrose synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1276 bits (3301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/749 (79%), Positives = 676/749 (90%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKLH LM+E+ VIDD+ R+QVLEG+LG+IL STQEAVV PP+VAFAIRPNPG WEFVK
Sbjct: 43 MKLHHLMEEMELVIDDKSERSQVLEGILGFILSSTQEAVVDPPYVAFAIRPNPGVWEFVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+S+DLSVEAIT TD+LKFKE V DE WA DEN+ E DFGA++ +P LTLSSSIGNG+
Sbjct: 103 VSSEDLSVEAITPTDYLKFKERVHDEKWATDENSFEADFGAFDSQIPLLTLSSSIGNGLE 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F SKF+T+KL+G+ + Q +VDYLL+L+HQGE LMIND+LN+A KLQMAL+VA+ LS L
Sbjct: 163 FTSKFLTSKLTGKLEKTQAIVDYLLTLNHQGESLMINDSLNSAAKLQMALVVADAFLSGL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
KDT YQ FELRFKEWGFE+GWG TA RV+ETMR+LSEVLQAPDP+++EKFLS+LPI+FN
Sbjct: 223 SKDTAYQNFELRFKEWGFERGWGDTAGRVKETMRTLSEVLQAPDPMNLEKFLSNLPIIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFS HGYFGQADVLGLPDTGGQVVYILDQVK+LE ELLLRI+QQGL +KPQI+VVTRL
Sbjct: 283 VVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKSLEAELLLRIRQQGLNVKPQILVVTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDARGTKC+ ELEPI TKHS+ILRVPF+TDKGIL +W+SRFD+YPYLE F QDAT I
Sbjct: 343 IPDARGTKCHHELEPISDTKHSHILRVPFQTDKGILRQWISRFDIYPYLERFTQDATAKI 402
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
LEF+ GKPDL+IGNY+DGNLVAS+MA KLGITQ TIAHALEKTKYEDSDVKWKELDPKYH
Sbjct: 403 LEFMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYH 462
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF+ADT+AMNA+DFII ST+QEIAGSKDRPGQYESH AFTLPGLCRVV GI+V DPK
Sbjct: 463 FSCQFMADTVAMNASDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPK 522
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI APGADQSVYFPYTEK++RL++FHP IE+LL++K DN EHIGYLADR+KPIIFSMAR
Sbjct: 523 FNIVAPGADQSVYFPYTEKEKRLSQFHPAIEDLLFSKVDNIEHIGYLADRRKPIIFSMAR 582
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LDVVKNL+GL EWYGKNKRLRNLVNLVIVG FFDPSKSKDREE AEIKKMH L++KYQLK
Sbjct: 583 LDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIDKYQLK 642
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ++R RNGELYRCIADT+GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 643 GQFRWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 702
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP NG+ESS+KIADFFE CKV+ + WN S GL+RINECYTWKIYA
Sbjct: 703 AEIIVDGVSGFHIDPLNGEESSNKIADFFEKCKVNQSQWNVISEAGLQRINECYTWKIYA 762
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
NKM+NMG +Y+FW+Q+NK QK AKQRYI+
Sbjct: 763 NKMVNMGNIYTFWRQVNKEQKEAKQRYIQ 791
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476487|ref|XP_002267020.2| PREDICTED: sucrose synthase 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1276 bits (3301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/748 (79%), Positives = 672/748 (89%), Gaps = 10/748 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL+ LMDE+ VIDD++ RTQVLEG+LG+ILCSTQEAV +PPHV F+IR NPGFWE+VK
Sbjct: 43 MKLNHLMDEMEAVIDDKNERTQVLEGVLGFILCSTQEAVAIPPHVIFSIRSNPGFWEYVK 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
V+SDDLSVEAIT D+LKFKE+VFDE+WAKD+NALE++F A++F +P+LTLSSSIGNG+S
Sbjct: 103 VSSDDLSVEAITAADYLKFKEMVFDENWAKDDNALELNFSAFDFPMPRLTLSSSIGNGVS 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
VSKF+T+KL+G AQPLVDYLLSL+HQGEKLMI + LNT KLQMALIVAEV +S L
Sbjct: 163 LVSKFMTSKLNGNSQSAQPLVDYLLSLNHQGEKLMITNTLNTPTKLQMALIVAEVFVSAL 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDTPY FELRFKEWGFEKGWG+TAERV+ETMRSLSE L+APDP++MEKFLS LP +FN
Sbjct: 223 PKDTPYPSFELRFKEWGFEKGWGNTAERVKETMRSLSEALEAPDPMNMEKFLSRLPTIFN 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQ+DVLGLPDTGGQVVYILDQV+ALEEELLLRIK QGL +KPQI+VVTRL
Sbjct: 283 VVIFSPHGYFGQSDVLGLPDTGGQVVYILDQVRALEEELLLRIKLQGLNVKPQILVVTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDARGTKCNQE EPI+ TKHS ILR+PF+T+KGIL++WVSRFD DAT I
Sbjct: 343 IPDARGTKCNQEWEPIDNTKHSTILRIPFRTEKGILNQWVSRFD----------DATAKI 392
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
+E + GKPDLIIGNY+DGNLVAS+MA+KLGITQ TIAHALEKTKYEDSDVKWKEL+PKYH
Sbjct: 393 IEHMEGKPDLIIGNYTDGNLVASLMATKLGITQGTIAHALEKTKYEDSDVKWKELEPKYH 452
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF ADTI+MNA DFII ST+QEIAGSKDRPGQYESHT+FTLPGLCRVV GI++ DPK
Sbjct: 453 FSCQFTADTISMNAADFIITSTYQEIAGSKDRPGQYESHTSFTLPGLCRVVSGINLFDPK 512
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPY E+ +RLT F P IEELLY+K+DNNEHIG+LADRKKPIIFSMAR
Sbjct: 513 FNIAAPGADQSVYFPYMERHKRLTSFQPAIEELLYSKQDNNEHIGFLADRKKPIIFSMAR 572
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD+VKN+TGLTEW+G NKRLR+LVNLVIV FFDPSKSKDREE AEIKKMH L+EKYQLK
Sbjct: 573 LDIVKNITGLTEWFGNNKRLRSLVNLVIVAGFFDPSKSKDREEMAEIKKMHTLIEKYQLK 632
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ+RWIAAQ+DR RNGELYRCIADTKGAFVQPA+YEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 633 GQIRWIAAQNDRRRNGELYRCIADTKGAFVQPAIYEAFGLTVIEAMNCGLPTFATNQGGP 692
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP GDESS+KIADFFE C+ D +WNK S GL+RINECYTWKIYA
Sbjct: 693 AEIIVDGVSGFHIDPNIGDESSNKIADFFEKCRDDSDHWNKISKAGLQRINECYTWKIYA 752
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYI 748
NK+LNMGC++SFW+QLN K AKQ+YI
Sbjct: 753 NKVLNMGCVFSFWRQLNTEHKQAKQKYI 780
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|313770767|gb|ADR82000.1| sucrose synthase 5 [Populus trichocarpa] gi|319748382|gb|ADV71187.1| sucrose synthase 5 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1264 bits (3270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/749 (80%), Positives = 661/749 (88%), Gaps = 10/749 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL L+DE+ VIDD+ RT+VL+GLLG I S QEAVV PP+VA +IRP+PGFWEFVK
Sbjct: 40 MKLQQLLDEMENVIDDQVERTRVLQGLLGDIWFSIQEAVVNPPYVALSIRPSPGFWEFVK 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS DLSVE IT TD+LKFKE+++DE+WAKD NALEVDFGA++FS+P LTLSSSIGNG+
Sbjct: 100 VNSADLSVEGITATDYLKFKEMIYDENWAKDANALEVDFGAFDFSVPHLTLSSSIGNGLG 159
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF T+KLSGR + AQPLVDYLLSL+H+GEKLMIN+ L++ KL+MALIVAE LS L
Sbjct: 160 FVSKFATSKLSGRLESAQPLVDYLLSLNHEGEKLMINETLSSVRKLRMALIVAEAYLSGL 219
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDT YQ FE FK WGFEKGWG+TAERV+ETMR LSEVLQAPDPL+ME F S LP +FN
Sbjct: 220 PKDTQYQNFETSFKAWGFEKGWGNTAERVKETMRCLSEVLQAPDPLNMENFFSRLPTVFN 279
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALE+ELLLRI+QQGL IKPQIVVVTRL
Sbjct: 280 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEDELLLRIEQQGLNIKPQIVVVTRL 339
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+ARGTKCNQELE I GTKHSNILRVPF + +L +WVSRFD D T +
Sbjct: 340 IPEARGTKCNQELESINGTKHSNILRVPFSIENKVLRQWVSRFD----------DVITKL 389
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ + KPDLIIGNY+DGNL A++MASKLGITQATIAHALEKTKYE+SDVKWKELDPKYH
Sbjct: 390 LDLMQRKPDLIIGNYTDGNLAATLMASKLGITQATIAHALEKTKYENSDVKWKELDPKYH 449
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF+ADTIAMNATDFIIAST+QEIAGSKDRPGQYESH +FTLPGLCRVV GIDV DPK
Sbjct: 450 FSCQFMADTIAMNATDFIIASTYQEIAGSKDRPGQYESHASFTLPGLCRVVSGIDVFDPK 509
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEKQ R TKFHP IEELLY+K N+EHIGYL D+KKPIIFSMAR
Sbjct: 510 FNIAAPGADQSVYFPYTEKQSRFTKFHPAIEELLYSKVVNDEHIGYLEDKKKPIIFSMAR 569
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGLTEWYGKNKRLR LVNLVIVG FFDP+KSKDREE AEI KMH L++KY+L
Sbjct: 570 LDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEITKMHGLIKKYRLN 629
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 630 GQFRWIAAQTDRNRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 689
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDG+SGFHIDP NGDESS+ IADFFE CKVDP YWNKF+ EGLKRINECYTWKIYA
Sbjct: 690 AEIIVDGISGFHIDPQNGDESSNIIADFFEKCKVDPGYWNKFAAEGLKRINECYTWKIYA 749
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
K+LNMG MYSFW+QLNK QKLAKQRYI+
Sbjct: 750 KKLLNMGNMYSFWRQLNKEQKLAKQRYIQ 778
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357491757|ref|XP_003616166.1| Sucrose synthase [Medicago truncatula] gi|355517501|gb|AES99124.1| Sucrose synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/749 (79%), Positives = 667/749 (89%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKLH+LM+E+ IDD + R +LEG LG+IL STQEAVV PP+VAFAIRPNPG WE+V+
Sbjct: 43 MKLHELMEEVERTIDDINERNYILEGNLGFILSSTQEAVVDPPYVAFAIRPNPGVWEYVR 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS+DLSVE IT TD+LKFKE V+D+ WA DENA E DFGA++ +P+LTLSSSIGNG+
Sbjct: 103 VNSEDLSVEPITPTDYLKFKERVYDQKWANDENAFEADFGAFDIGIPKLTLSSSIGNGLH 162
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF+T++ +G+ AQ +VDYLL L+H GE LMIND L++A KLQMALIVA+V LS +
Sbjct: 163 FVSKFLTSRTTGKLAKAQTIVDYLLKLNHHGESLMINDTLSSAAKLQMALIVADVFLSAI 222
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDT YQKFELR KEWGFEKGWG A RV+ETMR+LSEVLQAPDP+++E F S +P +F
Sbjct: 223 PKDTSYQKFELRLKEWGFEKGWGDNAGRVKETMRTLSEVLQAPDPVNLEIFFSRIPTIFK 282
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFS HGYFGQADVLGLPDTGGQVVYILDQVKALEEEL+LRIKQQGL KPQI+VVTRL
Sbjct: 283 VVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKALEEELILRIKQQGLNYKPQILVVTRL 342
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDARGTKC+QE EPI TKHS+ILRVPF T+KGIL +WVSRFD+YPYLE F QDATT I
Sbjct: 343 IPDARGTKCHQEFEPINDTKHSHILRVPFHTEKGILPQWVSRFDIYPYLERFTQDATTKI 402
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ + GKPDL+IGNY+DGNLVAS+MA KLGITQATIAHALEKTKYEDSDVKWKELDPKYH
Sbjct: 403 LDLMEGKPDLVIGNYTDGNLVASLMARKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 462
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF+ADT+AMN++DFII ST+QEIAGSKDRPGQYESH AFTLPGLCRVV GI+V DPK
Sbjct: 463 FSCQFMADTVAMNSSDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPK 522
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQS+YFPYTEK +R ++FHP IE+LL+NK DNNEHIGYLAD++KPIIFSMAR
Sbjct: 523 FNIAAPGADQSIYFPYTEKDQRHSQFHPAIEDLLFNKVDNNEHIGYLADKRKPIIFSMAR 582
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LDVVKNL+GL EWYGKNKRLRNLVNLVIVG FFDPSKSKDREE AEIKKMH L+EKYQLK
Sbjct: 583 LDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIEKYQLK 642
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 702
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP NGDESS+KI+DFFE CKVDP+YWN S GL+RINECYTWKIYA
Sbjct: 703 AEIIVDGVSGFHIDPLNGDESSNKISDFFEKCKVDPSYWNVISMAGLQRINECYTWKIYA 762
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
NK++NMG Y+FW+Q+NK QK AKQRYI
Sbjct: 763 NKLVNMGNTYTFWRQVNKEQKEAKQRYIH 791
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077386|ref|XP_002305240.1| predicted protein [Populus trichocarpa] gi|222848204|gb|EEE85751.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/749 (80%), Positives = 661/749 (88%), Gaps = 10/749 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL L+DE+ VIDD+ RT+VL+GLLG I S QEAVV PP+VA +IRP+PGFWEFVK
Sbjct: 40 MKLQQLLDEMENVIDDQVERTRVLQGLLGDIWFSIQEAVVNPPYVALSIRPSPGFWEFVK 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS DLSVE IT TD+LKFKE+++DE+WAKD NALEVDFGA++FS+P LTLSSSIGNG+
Sbjct: 100 VNSADLSVEGITATDYLKFKEMIYDENWAKDANALEVDFGAFDFSVPHLTLSSSIGNGLG 159
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF T+KLSGR + AQPLVDYLLSL+H+GEKLMIN+ L++ KL+MALIVAE LS L
Sbjct: 160 FVSKFATSKLSGRLESAQPLVDYLLSLNHEGEKLMINETLSSVRKLRMALIVAEAYLSGL 219
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDT YQ FE FK WGFEKGWG+TAERV+ETMR LSEVLQAPDPL+ME F S LP +FN
Sbjct: 220 PKDTQYQNFETSFKAWGFEKGWGNTAERVKETMRCLSEVLQAPDPLNMENFFSRLPTVFN 279
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALE+ELLLRI+QQGL IKPQIVVVTRL
Sbjct: 280 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEDELLLRIEQQGLNIKPQIVVVTRL 339
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+ARGTKCNQELE I GTKHSNILRVPF + +L +WVSRFD D T +
Sbjct: 340 IPEARGTKCNQELESINGTKHSNILRVPFSIENKVLRQWVSRFD----------DVITKL 389
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ + KPDLIIGNY+DGNL A++MASKLGITQATIAHALEKTKYE+SDVKWKELDPKYH
Sbjct: 390 LDLMQRKPDLIIGNYTDGNLAATLMASKLGITQATIAHALEKTKYENSDVKWKELDPKYH 449
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF+ADTIAMNATDFIIAST+QEIAGSKDRPGQYESH +FTLPGLCRVV GIDV DPK
Sbjct: 450 FSCQFMADTIAMNATDFIIASTYQEIAGSKDRPGQYESHASFTLPGLCRVVSGIDVFDPK 509
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEKQ R TKFHP IEELLY+K N+EHIGYL D+KKPIIFSMAR
Sbjct: 510 FNIAAPGADQSVYFPYTEKQSRFTKFHPAIEELLYSKVVNDEHIGYLEDKKKPIIFSMAR 569
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGLTEWYGKNKRLR LVNLVIVG FFDP+KSKDREE AEI KMH L++KY+L
Sbjct: 570 LDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEITKMHGLIKKYRLN 629
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 630 GQFRWIAAQTDRNRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 689
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDG+SGFHIDP NGDESS+ IADFFE CKVDP YWNKF+ EGLKRINECYTWKIYA
Sbjct: 690 AEIIVDGISGFHIDPQNGDESSNIIADFFEKCKVDPGYWNKFAAEGLKRINECYTWKIYA 749
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
K+LNMG MYSFW+QLNK QKLAKQRYI+
Sbjct: 750 KKLLNMGNMYSFWRQLNKEQKLAKQRYIQ 778
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|392050922|gb|AFM52238.1| putative sucrose synthase 7 [Gossypium arboreum] | Back alignment and taxonomy information |
|---|
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/750 (79%), Positives = 667/750 (88%), Gaps = 8/750 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
+K H+L DE +V+DD++ LG + S QEAVV PP+V F +RP PG WEFVK
Sbjct: 43 LKAHELRDEFEKVMDDKN-------ETLGTMFSSAQEAVVTPPYVTFTVRPTPGCWEFVK 95
Query: 61 VNSDDLS-VEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGI 119
VNS DLS V+ I+ ++LK KE DE+W+KDENALEVDF A++FS+P+LTL+SSIG G+
Sbjct: 96 VNSVDLSDVKQISSAEYLKLKETTADENWSKDENALEVDFEAFDFSMPKLTLASSIGKGL 155
Query: 120 SFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLST 179
+FVSK++T+KLSG D AQPLVDYLLSL++QGEKLMIN+ LNTA KLQ+ALIVAEVSLS
Sbjct: 156 NFVSKYITSKLSGSVDNAQPLVDYLLSLEYQGEKLMINEILNTAAKLQLALIVAEVSLSD 215
Query: 180 LPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILF 239
LP+DTPYQ ELRFKEWGFE+GWG T ERV ET+RSLSEVLQAPDP ++EK S LP +F
Sbjct: 216 LPRDTPYQSIELRFKEWGFERGWGDTVERVHETIRSLSEVLQAPDPQNLEKLFSKLPTIF 275
Query: 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTR 299
VVIFSPHGYFGQ+DVLGLPDTGGQVVYILDQV+A+EEEL+L+IK QGL IKPQI+VVTR
Sbjct: 276 KVVIFSPHGYFGQSDVLGLPDTGGQVVYILDQVRAMEEELVLKIKSQGLNIKPQILVVTR 335
Query: 300 LIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359
LIPDARGTKCNQE EP+ GTK+S ILRVPFKT+ GIL RWVSRFD+YPYLE FAQD T+
Sbjct: 336 LIPDARGTKCNQEWEPVIGTKYSQILRVPFKTETGILRRWVSRFDIYPYLETFAQDVTSK 395
Query: 360 ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419
IL+ + GKPDLIIGNY+DGNLV+S++ASKLGITQATIAHALEKTKYEDSDVKWKELDPKY
Sbjct: 396 ILDAMEGKPDLIIGNYTDGNLVSSLVASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 455
Query: 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479
HFSCQFIADTIAMNA DFIIAST+QEIAGSK+RPGQYESH AFTLPGLCRVV GI+V DP
Sbjct: 456 HFSCQFIADTIAMNAADFIIASTYQEIAGSKERPGQYESHAAFTLPGLCRVVSGINVYDP 515
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMA 539
KFNIAAPGADQSVYFPYTE +R T FHP IEELLY+K DN+EHIGYLADRKKPIIFSMA
Sbjct: 516 KFNIAAPGADQSVYFPYTETGKRFTSFHPAIEELLYSKVDNDEHIGYLADRKKPIIFSMA 575
Query: 540 RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599
RLD VKNLTGLTEWYGKNKRLR+LVNLVIVGAFF+PSKSKDREE AEIKKMHAL+EKYQL
Sbjct: 576 RLDTVKNLTGLTEWYGKNKRLRSLVNLVIVGAFFNPSKSKDREEVAEIKKMHALIEKYQL 635
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
KGQ+RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG
Sbjct: 636 KGQIRWIAAQTDRNRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 695
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIVDGVSGFHI+P NGDESS+KIADFFE CK +P YWN+FS +GLKRINECYTWKIY
Sbjct: 696 PAEIIVDGVSGFHINPTNGDESSNKIADFFEKCKTNPAYWNQFSADGLKRINECYTWKIY 755
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
ANK+LNMGCMY FWKQLNK QK AKQRYI+
Sbjct: 756 ANKVLNMGCMYRFWKQLNKDQKQAKQRYIQ 785
|
Source: Gossypium arboreum Species: Gossypium arboreum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134633|ref|XP_002327452.1| predicted protein [Populus trichocarpa] gi|222836006|gb|EEE74427.1| predicted protein [Populus trichocarpa] gi|313770765|gb|ADR81999.1| sucrose synthase 4 [Populus trichocarpa] gi|319748380|gb|ADV71186.1| sucrose synthase 4 [Populus trichocarpa] gi|429326642|gb|AFZ78661.1| sucrose synthase [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/749 (79%), Positives = 665/749 (88%), Gaps = 10/749 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL L+DE+ VIDD+ RT+VLEGLLG I S QEAVV PP+VAF+IRP+PGFWE+VK
Sbjct: 40 MKLQQLLDEMENVIDDQVERTRVLEGLLGDIWFSIQEAVVNPPYVAFSIRPSPGFWEYVK 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS +LSVE ITVTD+LKFKE+++DE+WAKD NALEVDFGA++FS+P LTLSSSIGNG+
Sbjct: 100 VNSANLSVEGITVTDYLKFKEMIYDENWAKDANALEVDFGAFDFSVPHLTLSSSIGNGLG 159
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKFVT+KLSGR + AQPLVDYLLSL+ QGEKLMIN+ L T KLQMALIVAEV LS L
Sbjct: 160 FVSKFVTSKLSGRLENAQPLVDYLLSLNRQGEKLMINETLGTVGKLQMALIVAEVYLSGL 219
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
KDTPYQ FE+ FKEWGFEKGWG TAERV+ETMR LSEVLQAPDP++MEKFLS LP +FN
Sbjct: 220 AKDTPYQNFEISFKEWGFEKGWGDTAERVKETMRCLSEVLQAPDPMNMEKFLSRLPTVFN 279
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGL +KPQIVV TRL
Sbjct: 280 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLNVKPQIVVATRL 339
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDARGT CN E E I+GTK+SNILRVPF+ + +L +WVSRFD + TT I
Sbjct: 340 IPDARGTTCNLEFEAIDGTKYSNILRVPFRVENRVLRQWVSRFD----------EVTTKI 389
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ + GKPDLIIGNY+DGN A++MA KLGITQATIAHALEKTKYE+SDVKWKEL+ KYH
Sbjct: 390 LDLMEGKPDLIIGNYTDGNFAATLMAGKLGITQATIAHALEKTKYENSDVKWKELESKYH 449
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
F CQF+AD +AMNATDFIIAST+QEIAGSKDR GQYESH AFTLPGLCRVV G++V DPK
Sbjct: 450 FPCQFMADIVAMNATDFIIASTYQEIAGSKDRTGQYESHAAFTLPGLCRVVSGVNVFDPK 509
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFP+TEKQ R T+F+P+IEELLY+K N+EHIGYL D+KKPIIFSMAR
Sbjct: 510 FNIAAPGADQSVYFPHTEKQSRFTQFNPDIEELLYSKVVNDEHIGYLEDKKKPIIFSMAR 569
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGLTEWYGKNKRLR LVNLVIVG FFDP+KSKDREE AEIKKMH L+EKYQLK
Sbjct: 570 LDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEIKKMHELIEKYQLK 629
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ+RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 630 GQIRWIAAQTDRKRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 689
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
+EIIVDG+SGFHIDP NGDESS+ IADFFE CKVDP +WNK+S EGLKRINECYTWKIYA
Sbjct: 690 SEIIVDGISGFHIDPKNGDESSNIIADFFEKCKVDPGHWNKYSLEGLKRINECYTWKIYA 749
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
NK+LNMG +YSFW+QLNK QKLAKQRYI+
Sbjct: 750 NKLLNMGNVYSFWRQLNKEQKLAKQRYIQ 778
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429326644|gb|AFZ78662.1| sucrose synthase [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/749 (79%), Positives = 655/749 (87%), Gaps = 10/749 (1%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL L+DE+ VIDD+ RT+VL+GLLG I S QEAVV PP+VA +IRP+PGFWEFVK
Sbjct: 40 MKLQQLLDEMENVIDDQVERTRVLQGLLGDIWFSIQEAVVNPPYVALSIRPSPGFWEFVK 99
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS DLSVE IT TD+LKFKE+++DE+WAKD NALEVDFGA++FS+P LTLSSSIGNG+
Sbjct: 100 VNSADLSVEGITATDYLKFKEMIYDENWAKDANALEVDFGAFDFSVPHLTLSSSIGNGLG 159
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
FVSKF T+KLSGR + AQPLVDYLLSL+H+GEKLMIN+ L++ KL+MALIVAE LS L
Sbjct: 160 FVSKFATSKLSGRLESAQPLVDYLLSLNHEGEKLMINETLSSVRKLRMALIVAEAYLSGL 219
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDT YQ FE FK WGFEKGWG+TAERV+ETMR LSEVLQAPDPL+ME F S LP +FN
Sbjct: 220 PKDTQYQNFETSFKAWGFEKGWGNTAERVKETMRCLSEVLQAPDPLNMENFFSRLPTVFN 279
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALE+ELLLRI+QQGL IKPQIVVVTRL
Sbjct: 280 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEDELLLRIEQQGLNIKPQIVVVTRL 339
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+ARGTKCNQELE I GTKHSNILRVPF + +L +WVSRFD D T I
Sbjct: 340 IPEARGTKCNQELESINGTKHSNILRVPFSIENKVLRQWVSRFD----------DVITKI 389
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ + G PDLIIGNY+DGN A++MA KLG+TQATIAHALEKTKYE+SDVKWKEL KYH
Sbjct: 390 LDLMEGNPDLIIGNYTDGNFAATLMAGKLGVTQATIAHALEKTKYENSDVKWKELQSKYH 449
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
F CQF+AD +AMNATDF+IAST+QEIAGSKDRPGQYESH +FTLPGLCRVV GIDV DPK
Sbjct: 450 FPCQFMADIVAMNATDFVIASTYQEIAGSKDRPGQYESHASFTLPGLCRVVSGIDVFDPK 509
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEKQ R TKFHP IEELLY+K N+EHIGYL D+KKPIIFSMAR
Sbjct: 510 FNIAAPGADQSVYFPYTEKQSRFTKFHPAIEELLYSKVVNDEHIGYLEDKKKPIIFSMAR 569
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGLTEWYGKNKRLR LVNLVIVG FFDP+KSKDREE AEI KMH L++KY+L
Sbjct: 570 LDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEITKMHGLIKKYRLN 629
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ+DR RNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 630 GQFRWIAAQTDRNRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 689
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDG+SGFHIDP NGDESS+ IADFFE CKVDP YWNKF+ EGLKRINECYTWKIYA
Sbjct: 690 AEIIVDGISGFHIDPQNGDESSNIIADFFEKCKVDPGYWNKFAAEGLKRINECYTWKIYA 749
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
K+LNMG MYSFW+QLNK QKLAKQRYI+
Sbjct: 750 KKLLNMGNMYSFWRQLNKEQKLAKQRYIQ 778
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 749 | ||||||
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.991 | 0.888 | 0.753 | 1.6e-308 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 1.0 | 0.795 | 0.736 | 1.1e-307 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.994 | 0.920 | 0.593 | 4e-248 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.973 | 0.902 | 0.595 | 2.9e-238 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.998 | 0.926 | 0.571 | 1.1e-236 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.994 | 0.912 | 0.574 | 4.8e-236 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.953 | 0.883 | 0.601 | 4.8e-236 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.627 | 0.447 | 0.267 | 7.7e-28 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.632 | 0.454 | 0.255 | 7.4e-27 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.630 | 0.450 | 0.251 | 9.5e-27 |
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2960 (1047.0 bits), Expect = 1.6e-308, P = 1.6e-308
Identities = 564/749 (75%), Positives = 649/749 (86%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MKL++LMDE+ VI+D R +V+EG LG ILC TQ AVV+PP+VAFA+R PG W++VK
Sbjct: 38 MKLNELMDEMEIVINDVTQRRRVMEGDLGKILCFTQ-AVVIPPNVAFAVRGTPGNWQYVK 96
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS +LSVEA++ T +LK KE +FDE+WA DENALEVDFGA +F+LP L+LSSSIGNG+S
Sbjct: 97 VNSSNLSVEALSSTQYLKLKEFLFDENWANDENALEVDFGALDFTLPWLSLSSSIGNGLS 156
Query: 121 FVSKFVTAKLSGR-QDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLST 179
FVS +KL GR D Q LVDYLLSL+HQGEKLM+N+ LNTA KL+M+LI+A+V LS
Sbjct: 157 FVS----SKLGGRLNDNPQSLVDYLLSLEHQGEKLMMNETLNTARKLEMSLILADVFLSE 212
Query: 180 LPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILF 239
LPKDTP+Q FELRFKE GFEKGWG +A RV+ETMR LSE+LQAPDP ++++F + +P +F
Sbjct: 213 LPKDTPFQAFELRFKECGFEKGWGESAGRVKETMRILSEILQAPDPQNIDRFFARVPRIF 272
Query: 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTR 299
NVVIFS HGYFGQ DVLGLPDTGGQVVYILDQVKALE+ELL RI QGL KPQI+VVTR
Sbjct: 273 NVVIFSVHGYFGQTDVLGLPDTGGQVVYILDQVKALEDELLQRINSQGLNFKPQILVVTR 332
Query: 300 LIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359
LIPDA+ TKCNQELEPI GTK+SNILR+PF T+ GIL RWVSRFD+YPYLE F +DATT
Sbjct: 333 LIPDAKKTKCNQELEPIFGTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTKDATTK 392
Query: 360 ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419
IL+ L GKPDLIIGNY+DGNLVAS+MA+KLGITQATIAHALEKTKYEDSD+KWKE DPKY
Sbjct: 393 ILDILEGKPDLIIGNYTDGNLVASLMANKLGITQATIAHALEKTKYEDSDIKWKEFDPKY 452
Query: 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479
HFS QF AD I+MN+ DFIIAST+QEIAGSK+R GQYESH +FT+PGL RVV GI+V DP
Sbjct: 453 HFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQYESHMSFTVPGLYRVVSGINVFDP 512
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMA 539
+FNIAAPGAD S+YFP+T + RR TKF+ I+ELLY++ +N+EHIGYL D+KKPIIFSMA
Sbjct: 513 RFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDELLYSQSENDEHIGYLVDKKKPIIFSMA 572
Query: 540 RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599
RLDVVKNLTGLTEWY KNKRLR+LVNLVIVG FFD SKSKDREE +EIKKMH+L+EKYQL
Sbjct: 573 RLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDASKSKDREEISEIKKMHSLIEKYQL 632
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
KGQ RWI AQ+DR RNGELYR IADT+GAFVQPA YEAFGLTVIEAM+CGL TFATNQGG
Sbjct: 633 KGQFRWITAQTDRTRNGELYRSIADTRGAFVQPAHYEAFGLTVIEAMSCGLVTFATNQGG 692
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIVDGVSGFHIDP NG+ESSDKIADFFE +DP YWN FS EGL+RINECYTWKIY
Sbjct: 693 PAEIIVDGVSGFHIDPSNGEESSDKIADFFEKSGMDPDYWNMFSNEGLQRINECYTWKIY 752
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYI 748
ANK++NMG YS+W+ LNK QKLAKQRYI
Sbjct: 753 ANKVINMGSTYSYWRHLNKDQKLAKQRYI 781
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2952 (1044.2 bits), Expect = 1.1e-307, P = 1.1e-307
Identities = 552/749 (73%), Positives = 632/749 (84%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
MK LM+E+ + I+D R+++LEGL GYIL TQEA V+PP VA A RPNPGFWE+VK
Sbjct: 45 MKREHLMNEIEKCIEDSRERSKILEGLFGYILTCTQEAAVVPPFVALAARPNPGFWEYVK 104
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VNS DL+V+ IT TD+LK KE VFDE W+KDENALE+DFGA +F+ P+L+LSSSIG G
Sbjct: 105 VNSGDLTVDEITATDYLKLKESVFDESWSKDENALEIDFGAIDFTSPRLSLSSSIGKGAD 164
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
++SKF+++KL G+ D +PL++YLL L+H GE LMIND+LNT KLQ +L++A + +ST
Sbjct: 165 YISKFISSKLGGKSDKLEPLLNYLLRLNHHGENLMINDDLNTVAKLQKSLMLAVIVVSTY 224
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
K TPY+ F R KE GFEKGWG TAERV+ETM LSEVL+APD ++ S LP +FN
Sbjct: 225 SKHTPYETFAQRLKEMGFEKGWGDTAERVKETMIILSEVLEAPDNGKLDLLFSRLPTVFN 284
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFS HGYFGQ DVLGLPDTGGQVVYILDQV+ALEEELL+RI QQGL KPQI+VVTRL
Sbjct: 285 VVIFSVHGYFGQQDVLGLPDTGGQVVYILDQVRALEEELLIRINQQGLGFKPQILVVTRL 344
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IP+ARGTKC+QELE IEGTKHS+ILRVPF T+KG+L +WVSRFD+YPYLE F QDAT+ I
Sbjct: 345 IPEARGTKCDQELEAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQDATSKI 404
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L+ L KPDLIIGNY+DGNLVAS+MA+KLG+TQ TIAHALEKTKYEDSD KWKELDPKYH
Sbjct: 405 LQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTKYEDSDAKWKELDPKYH 464
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN TDFII ST+QEIAGSKDRPGQYESHTAFT+PGLCRVV GIDV DPK
Sbjct: 465 FSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGIDVFDPK 524
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNIAAPGADQSVYFPYTEK +R TKFHP I+ELLYN++DN EH+GYLADR+KPIIFSMAR
Sbjct: 525 FNIAAPGADQSVYFPYTEKDKRFTKFHPSIQELLYNEKDNAEHMGYLADREKPIIFSMAR 584
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKN+TGL EWYGK+KRLR + NLV+V FFD SKS DREE AEIKKMH L+EKY+LK
Sbjct: 585 LDTVKNITGLVEWYGKDKRLREMANLVVVAGFFDMSKSNDREEKAEIKKMHDLIEKYKLK 644
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
G+ RWIAAQ+DR RN ELYRCIADTKG FVQPALYEAFGLTVIEAMNCGLPTFATNQGGP
Sbjct: 645 GKFRWIAAQTDRYRNSELYRCIADTKGVFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 704
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDP NGDES KI DFF C+ D YW+ S GLKRI ECYTWKIYA
Sbjct: 705 AEIIVDGVSGFHIDPNNGDESVTKIGDFFSKCRSDGLYWDNISKGGLKRIYECYTWKIYA 764
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
K+L MG +Y FW+Q+N+ QK AK+RYIE
Sbjct: 765 EKLLKMGSLYGFWRQVNEDQKKAKKRYIE 793
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2390 (846.4 bits), Expect = 4.0e-248, P = 4.0e-248
Identities = 443/746 (59%), Positives = 574/746 (76%)
Query: 4 HDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNS 63
H+L+DEL VI D++ + + +G G IL S EA+V+PP VA A+RP PG WE+V+VN
Sbjct: 45 HNLIDELESVIGDDETKKSLSDGPFGEILKSAMEAIVVPPFVALAVRPRPGVWEYVRVNV 104
Query: 64 DDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVS 123
+LSVE +TV+++L+FKE + D D LE+DF + ++P+ + SSSIGNG+ F++
Sbjct: 105 FELSVEQLTVSEYLRFKEELVDGP-NSDPFCLELDFEPFNANVPRPSRSSSIGNGVQFLN 163
Query: 124 KFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTLPKD 183
+ +++ + +DC +PL+D+L ++G LM+ND + + +LQ+ L AE +S L ++
Sbjct: 164 RHLSSVMFRNKDCLEPLLDFLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKLSQE 223
Query: 184 TPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVI 243
TP+ +FE + GFEKGWG TA RV E M LS++LQAPDP +EKFL +P++FNVVI
Sbjct: 224 TPFSEFEYALQGMGFEKGWGDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFNVVI 283
Query: 244 FSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303
SPHGYFGQA+VLGLPDTGGQVVYILDQV+ALE E+LLRIK+QGL I P I++VTRLIPD
Sbjct: 284 LSPHGYFGQANVLGLPDTGGQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRLIPD 343
Query: 304 ARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEF 363
A+GT CNQ LE + GT+H++ILRVPF+++KGIL +W+SRFDV+PYLE +AQDA + I+
Sbjct: 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGE 403
Query: 364 LGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSC 423
L G PD IIGNYSDGNLVAS+MA ++G+TQ TIAHALEKTKY DSD+ WK+ D KYHFSC
Sbjct: 404 LQGVPDFIIGNYSDGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYHFSC 463
Query: 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNI 483
QF AD IAMN DFII ST+QEIAG+K+ GQYESH AFTLPGL RVV GIDV DPKFNI
Sbjct: 464 QFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPKFNI 523
Query: 484 AAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDV 543
+PGAD ++YFPY+E+ RRLT H IEE+LY+ + +EH+G L+DR KPI+FSMARLD
Sbjct: 524 VSPGADMTIYFPYSEETRRLTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMARLDK 583
Query: 544 VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603
VKN++GL E Y KN +LR LVNLV++ D +KSKDREE EI+KMH LM+ Y+L GQ
Sbjct: 584 VKNISGLVEMYSKNTKLRELVNLVVIAGNIDVNKSKDREEIVEIEKMHNLMKNYKLDGQF 643
Query: 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 663
RWI AQ++R RNGELYR IADT+GAF QPA YEAFGLTV+EAM CGLPTFAT GGPAEI
Sbjct: 644 RWITAQTNRARNGELYRYIADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703
Query: 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723
I G+SGFHIDPY+ +++ + +ADFFE CK DP +W K S GL+RI E YTWKIY+ ++
Sbjct: 704 IEHGLSGFHIDPYHPEQAGNIMADFFERCKEDPNHWKKVSDAGLQRIYERYTWKIYSERL 763
Query: 724 LNMGCMYSFWKQLNKGQKLAKQRYIE 749
+ + +Y FWK ++K ++ +RY+E
Sbjct: 764 MTLAGVYGFWKYVSKLERRETRRYLE 789
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2297 (813.6 bits), Expect = 2.9e-238, P = 2.9e-238
Identities = 438/735 (59%), Positives = 560/735 (76%)
Query: 17 EDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDF 76
E R ++ G +L STQEA+V+PP VA A+RP PG WE+++VN L VE + +F
Sbjct: 58 EQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEF 117
Query: 77 LKFKELVFDEDWAKDEN-ALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQD 135
L FKE + D K+ N LE+DF + S+P+ TL IGNG+ F+++ ++AKL ++
Sbjct: 118 LHFKEELVDG--VKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKE 175
Query: 136 CAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKE 195
PL+ +L HQG+ LM+++ + LQ L AE L+ L +T Y++FE +F+E
Sbjct: 176 SLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEE 235
Query: 196 WGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADV 255
G E+GWG AERV + +R L ++L+APDP +E FL +P++FNVVI SPHGYF Q +V
Sbjct: 236 IGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNV 295
Query: 256 LGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315
LG PDTGGQVVYILDQV+ALE E+L RIKQQGL IKP+I+++TRL+PDA GT C + LE
Sbjct: 296 LGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER 355
Query: 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNY 375
+ +++ +ILRVPF+T+KGI+ +W+SRF+V+PYLE + +DA + + L GKPDLIIGNY
Sbjct: 356 VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNY 415
Query: 376 SDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNAT 435
SDGNLVAS++A KLG+TQ TIAHALEKTKY DSD+ WK+LD KYHFSCQF AD AMN T
Sbjct: 416 SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHT 475
Query: 436 DFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP 495
DFII STFQEIAGSK+ GQYESHTAFTLPGL RVV GIDV DPKFNI +PGAD S+YFP
Sbjct: 476 DFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP 535
Query: 496 YTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555
YTE++RRLTKFH EIEELLY+ +N EH+ L D+KKPI+F+MARLD VKNL+GL EWYG
Sbjct: 536 YTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYG 595
Query: 556 KNKRLRNLVNLVIVGAFFDPSK-SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR 614
KN RLR L NLV+VG D K SKD EE AE+KKM+ L+E+Y+L GQ RWI++Q DR+R
Sbjct: 596 KNTRLRELANLVVVGG--DRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVR 653
Query: 615 NGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID 674
NGELYR I DTKGAFVQPALYEAFGLTV+EAM CGLPTFAT +GGPAEIIV G SGFHID
Sbjct: 654 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHID 713
Query: 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYSFWK 734
PY+GD+++D +ADFF CK DP++W++ S GL+RI E YTW+IY+ ++L + +Y FWK
Sbjct: 714 PYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWK 773
Query: 735 QLNKGQKLAKQRYIE 749
++ +L +RY+E
Sbjct: 774 HVSNLDRLEARRYLE 788
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2282 (808.4 bits), Expect = 1.1e-236, P = 1.1e-236
Identities = 428/749 (57%), Positives = 565/749 (75%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H L+DE + + + + + +L S +EA+V+PP VA AIRP PG E+V+
Sbjct: 39 LQSHQLIDEFLKTVKVDGTLEDLNKSPFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVR 98
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +LSV+ +TV+++L+FKE + + A + LE+DF + +LP+ T SSSIGNG+
Sbjct: 99 VNVYELSVDHLTVSEYLRFKEELVNGH-ANGDYLLELDFEPFNATLPRPTRSSSIGNGVQ 157
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++ + ++ +PL+++L + H G +M+ND + LQ AL AE LS L
Sbjct: 158 FLNRHLSSIMFRNKESMEPLLEFLRTHKHDGRPMMLNDRIQNIPILQGALARAEEFLSKL 217
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
P TPY +FE + GFE+GWG TA++V E + L ++LQAPDP +E FL +P++FN
Sbjct: 218 PLATPYSEFEFELQGMGFERGWGDTAQKVSEMVHLLLDILQAPDPSVLETFLGRIPMVFN 277
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYFGQA+VLGLPDTGGQVVYILDQV+ALE E+LLRI++QGL + P+I++VTRL
Sbjct: 278 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLEVIPKILIVTRL 337
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+P+A+GT CNQ LE + GT+H++ILR+PF+T+KGIL +W+SRFDV+PYLE FA+DA+ I
Sbjct: 338 LPEAKGTTCNQRLERVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEI 397
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L G P+LIIGNYSDGNLVAS++ASKLG+ Q IAHALEKTKY +SD+ W+ + KYH
Sbjct: 398 SAELQGVPNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDIYWRNHEDKYH 457
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FS QF AD IAMN DFII ST+QEIAGSK+ GQYESHTAFT+PGL RVV GIDV DPK
Sbjct: 458 FSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPK 517
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD ++YFPY++K+RRLT H IEELL++ E N+EH+G L+D+ KPIIFSMAR
Sbjct: 518 FNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQNDEHVGLLSDQSKPIIFSMAR 577
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGL E Y KN +LR L NLVIVG + D ++S+DREE AEI+KMH+L+E+Y L
Sbjct: 578 LDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQSRDREEMAEIQKMHSLIEQYDLH 637
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
G+ RWIAAQ +R RNGELYR IADTKG FVQPA YEAFGLTV+E+M C LPTFAT GGP
Sbjct: 638 GEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGP 697
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEII +GVSGFHIDPY+ D+ + + FFE C +P +W K S GLKRI E YTWK Y+
Sbjct: 698 AEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYS 757
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
++L + +Y+FWK ++K ++ +RY+E
Sbjct: 758 ERLLTLAGVYAFWKHVSKLERRETRRYLE 786
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2276 (806.3 bits), Expect = 4.8e-236, P = 4.8e-236
Identities = 431/750 (57%), Positives = 561/750 (74%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H ++ E N I + D R ++ +G +L S QE +V+ P VA AIRP PG WE+V+
Sbjct: 46 LQAHQIIAEYNNAISEAD-REKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVR 104
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +L+VE +TV ++L+FKE + +E + LE+DF + S P+ +LS SIGNG+
Sbjct: 105 VNVSELAVELLTVPEYLQFKEQLVEEG-TNNNFVLELDFEPFNASFPRPSLSKSIGNGVQ 163
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++KL ++ PL+++L + +++G +M+ND + + LQ AL AE LS L
Sbjct: 164 FLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGL 223
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
DTPY +F RF+E G EKGWG A+R +ET+ L ++L+APDP +EKFL ++P++FN
Sbjct: 224 SADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLGTIPMVFN 283
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYF QA+VLG PDTGGQVVYILDQV+A+E E+LLRIKQQGL I P+I++VTRL
Sbjct: 284 VVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQQGLNITPRILIVTRL 343
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+PDA GT C Q LE + GT+H++ILRVPF+T+ GI+ +W+SRF+V+PYLE F D I
Sbjct: 344 LPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEI 403
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L PDLIIGNYSDGNLVA ++A K+G+T TIAHALEKTKY +SD+ WK+ + YH
Sbjct: 404 AGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYH 463
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF D IAMN DFII STFQEIAG+KD GQYESH AFT+PGL RVV GIDV DPK
Sbjct: 464 FSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPK 523
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD S+YFPY+E ++RLT HPEIEELLY++ DNNEH L DR KPIIFSMAR
Sbjct: 524 FNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIFSMAR 583
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQL 599
LD VKNLTGL E YG+N RL+ LVNLV+V G +PSK D+EE AE KKM L+E+Y L
Sbjct: 584 LDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSK--DKEEQAEFKKMFDLIEQYNL 641
Query: 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659
G +RWI+AQ +R+RNGELYR I DTKGAFVQPA YEAFGLTV+E+M CGLPTFAT GG
Sbjct: 642 NGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGG 701
Query: 660 PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719
PAEIIV+GVSGFHIDPY GD++S + +FFE C+ DP++W K S GL+RI E YTWK+Y
Sbjct: 702 PAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLY 761
Query: 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+ +++ + +Y FWK ++ ++ +RY+E
Sbjct: 762 SERLMTLTGVYGFWKYVSNLERRETRRYLE 791
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2276 (806.3 bits), Expect = 4.8e-236, P = 4.8e-236
Identities = 433/720 (60%), Positives = 551/720 (76%)
Query: 32 LCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFKELVFDEDWAKD 91
L S QEA+V+PP VA A+RP PG WE+V+VN DL VE + +++L+FKE + D K+
Sbjct: 73 LRSAQEAIVLPPFVALAVRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEELVDG--IKN 130
Query: 92 EN-ALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQ 150
N LE+DF + + P+ TL+ IG+G+ F+++ ++AKL ++ PL+ +L H+
Sbjct: 131 GNFTLELDFEPFNAAFPRPTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKFLRLHSHE 190
Query: 151 GEKLMINDNLNTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVR 210
G+ LM+N+ + LQ L AE L L +T Y +FE +F+E G E+GWG TAERV
Sbjct: 191 GKTLMLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWGDTAERVL 250
Query: 211 ETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILD 270
+R L ++L+APDP +E FL +P++FNVVI SPHGYF Q +VLG PDTGGQVVYILD
Sbjct: 251 NMIRLLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILD 310
Query: 271 QVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFK 330
QV+ALE E+L RIKQQGL I P+I+++TRL+PDA GT C Q LE + G+++ +ILRVPF+
Sbjct: 311 QVRALETEMLQRIKQQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCDILRVPFR 370
Query: 331 TDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLG 390
T+KGI+ +W+SRF+V+PYLE F +D I + L GKPDLIIGNYSDGNLVAS++A KLG
Sbjct: 371 TEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLG 430
Query: 391 ITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSK 450
+TQ TIAHALEKTKY DSD+ WK+LD KYHFSCQF AD IAMN TDFII STFQEIAGSK
Sbjct: 431 VTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSK 490
Query: 451 DRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEI 510
D GQYESH +FTLPGL RVV GIDV DPKFNI +PGAD S+YF YTE++RRLT FH EI
Sbjct: 491 DTVGQYESHRSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRLTAFHLEI 550
Query: 511 EELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVG 570
EELLY+ +N EH+ L D+KKPIIF+MARLD VKNL+GL EWYGKN RLR LVNLV+VG
Sbjct: 551 EELLYSDVENEEHLCVLKDKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVG 610
Query: 571 AFFDPSK-SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAF 629
D K S+D EE AE+KKM+ L+E+Y+L GQ RWI++Q +R+RNGELYR I DTKGAF
Sbjct: 611 G--DRRKESQDNEEKAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 668
Query: 630 VQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689
VQPALYEAFGLTV+EAM CGLPTFAT GGPAEIIV G SGFHIDPY+GD++++ +ADFF
Sbjct: 669 VQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFF 728
Query: 690 EACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
CK DP++W++ S GL+RI E YTW+IY+ ++L + +Y FWK ++ +L +RY+E
Sbjct: 729 TKCKHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLE 788
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 136/509 (26%), Positives = 228/509 (44%)
Query: 241 VVIFSPHGYF-GQADVLGLP-DTGGQVVYILDQVKALEE-ELLLRIKQQGLYIKPQIVVV 297
+V+ S HG G+ LG DTGGQV Y+++ +AL E + R+ I V
Sbjct: 197 IVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVHRVDLLTRQISSPEVDY 256
Query: 298 TRLIPDARGTKCNQELEPIEGTKHSNILRVPFKT-DKGILHR--W--VSRFDVYPYLEGF 352
+ P C E G S I+R+P + DK I W + F V L
Sbjct: 257 SYGEP-VEMLSCPPEGSDSCG---SYIIRIPCGSRDKYIPKESLWPHIPEF-VDGALNHI 311
Query: 353 AQDATTMILEFLGGKPD---LIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYED-- 407
A ++ + GGKP +I G+Y+D VA+ +A L + H+L + K+E
Sbjct: 312 VSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGHSLGRNKFEQLL 371
Query: 408 --SDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLP 465
+ +++D Y + A+ +++A + ++ ST QEI G Y+ L
Sbjct: 372 QQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQW---GLYDGFD-IKLE 427
Query: 466 GLCRVVK--GIDVLD---PKFNIAAPGADQSVYFPYTEKQRR---LTKFHPEIEELLYNK 517
RV + G+ L P+ + PG D S ++ + P+ ++
Sbjct: 428 RKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDRNQIKKPV 487
Query: 518 EDN-NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPS 576
+E + + ++ KP I +++R D KN+T L + +G+ + LR L NLV++ D
Sbjct: 488 PPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLILGNRDDI 547
Query: 577 KSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYE 636
+ + + + L+++Y L GQ+ + + ++YR A TKG F+ PAL E
Sbjct: 548 EEMPNSSSVVLMNVLKLIDQYDLYGQVAY-PKHHKQSEVPDIYRLAAKTKGVFINPALVE 606
Query: 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDP 696
FGLT+IEA GLP AT GGP +I+ +G +DP++ SD + +
Sbjct: 607 PFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLV----ANK 662
Query: 697 TYWNKFSTEGLKRINECYTWKIYANKMLN 725
W + GLK I+ ++W + L+
Sbjct: 663 HLWAECRKNGLKNIHR-FSWPEHCRNYLS 690
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 137/537 (25%), Positives = 250/537 (46%)
Query: 241 VVIFSPHGYF-GQADVLGLP-DTGGQVVYILDQVKALEEEL-LLRIKQQGLYIKPQIVVV 297
+V+ S HG G+ LG DTGGQV Y+++ +AL + R+ + V
Sbjct: 170 LVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDY 229
Query: 298 TRLIPDARGTKCNQE--LEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQD 355
+ P T + E + + + + I+R+PF G +++ + ++P++ F
Sbjct: 230 SYGEPTEMLTPRDSEDFSDEMGESSGAYIVRIPF----GPKDKYIPKELLWPHIPEFVDG 285
Query: 356 ATTMILEF---LG-----GKP---DLIIGNYSDGNLVASVMASKLGITQATIAHALEKTK 404
A + I++ LG GKP I G+Y+D ++++ L + H+L + K
Sbjct: 286 AMSHIMQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDK 345
Query: 405 YED----SDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHT 460
E + +E++ Y + + ++++ ++ +I ST QEI D Q+ +
Sbjct: 346 LEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEI----DE--QWRLYD 399
Query: 461 AFTLPGLCRVVKGIDVLDPKFNIAAPGA--DQSVYFPYTEKQRRLTKFHPEIEELLYNKE 518
F P L R ++ K N++ G + V P + + ++E+ N+E
Sbjct: 400 GFD-PILERKLRA----RIKRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDMEDTDGNEE 454
Query: 519 DNN--------EHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVG 570
E + + ++ +KP+I ++AR D KN+T L + +G+ + LR L NL ++
Sbjct: 455 HPTSPDPPIWAEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIM 514
Query: 571 AFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA--AQSDRLRNGELYRCIADTKGA 628
D ++ + + L++KY L GQ+ + QSD ++YR A +KG
Sbjct: 515 GNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAYPKHHKQSDV---PDIYRLAAKSKGV 571
Query: 629 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI--IVDGVSGFHIDPYNGDESSDKIA 686
F+ PA+ E FGLT+IEA GLP AT GGP +I ++D +G +DP+ D+ S I+
Sbjct: 572 FINPAIIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD--NGLLVDPH--DQQS--IS 625
Query: 687 DFFEACKVDPTYWNKFSTEGLKRINECYTW----KIYANKMLNMGCMYSFWKQLNKG 739
+ D W K GLK I++ ++W K Y +++ + + W+ + G
Sbjct: 626 EALLKLVADKHLWAKCRQNGLKNIHQ-FSWPEHCKTYLSRITSFKPRHPQWQSDDGG 681
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 336 (123.3 bits), Expect = 9.5e-27, P = 9.5e-27
Identities = 133/528 (25%), Positives = 244/528 (46%)
Query: 241 VVIFSPHGYF-GQADVLGLP-DTGGQVVYILDQVKALEEEL-LLRIKQQGLYIKPQIVVV 297
+V+ S HG G+ LG DTGGQV Y+++ +AL + R+ + V
Sbjct: 177 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDS 236
Query: 298 TRLIPDARGTKCNQELEPIEG-TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDA 356
+ P + ++E G + + I+R+PF G ++V + ++P++ F A
Sbjct: 237 SYSEPSEMLNPIDTDIEQENGESSGAYIIRIPF----GPKDKYVPKELLWPHIPEFVDRA 292
Query: 357 TTMILEF-------LGGK----PDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKY 405
+ I++ +GG P I G+Y+D ++++ L + H+L + K
Sbjct: 293 LSHIMQISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKL 352
Query: 406 EDSDVKWK---ELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAF 462
E + + E++ Y + A+ + ++A++ +I ST QE+ D Q+ + F
Sbjct: 353 EQLLKQGRPKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEV----DE--QWRLYDGF 406
Query: 463 TLPGL-----CRVVKGIDVLD---PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELL 514
P L R+ +G+ L P+ + PG + P+ + +P+ +
Sbjct: 407 D-PVLERKLRARMKRGVSCLGRFMPRMVVIPPGMEFHHIVPH-DVDADGDDENPQTAD-- 462
Query: 515 YNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFD 574
+E + + ++ +KP+I ++AR D KNL L + +G+ + LR L NL ++ +
Sbjct: 463 --PPIWSEIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRN 520
Query: 575 PSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634
++ + + L++KY L GQ+ + + E+YR A TKG F+ PA
Sbjct: 521 DIDELSSTNSSVLLSILKLIDKYDLYGQVA-MPKHHQQSDVPEIYRLAAKTKGVFINPAF 579
Query: 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEI--IVDGVSGFHIDPYNGDESSDKIADFFEAC 692
E FGLT+IEA GLPT AT GGP +I ++D +G +DP+ D+ + IAD
Sbjct: 580 IEPFGLTLIEAGAHGLPTVATINGGPVDIHRVLD--NGLLVDPH--DQQA--IADALLKL 633
Query: 693 KVDPTYWNKFSTEGLKRINECYTW----KIYANKMLNMGCMYSFWKQL 736
D W + GL I+ ++W K Y ++ + + W+++
Sbjct: 634 VSDRQLWGRCRQNGLNNIH-LFSWPEHCKTYLARIASCKQRHPKWQRV 680
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.5835 | 0.9692 | 0.9477 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.5837 | 0.9906 | 0.9263 | N/A | no |
| Q6K973 | SUS6_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7017 | 0.9946 | 0.8806 | no | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.5826 | 0.9933 | 0.9242 | N/A | no |
| H6TFZ4 | SUS5_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7093 | 1.0 | 0.8760 | yes | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.5746 | 0.9906 | 0.9251 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.5818 | 0.9919 | 0.9229 | N/A | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.5853 | 0.9933 | 0.9230 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.5699 | 0.9933 | 0.9117 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.5693 | 0.9893 | 0.9182 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.5853 | 0.9933 | 0.9242 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.576 | 0.9946 | 0.9085 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.5813 | 0.9919 | 0.9229 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.588 | 0.9933 | 0.9242 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.5702 | 0.9866 | 0.9202 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.5797 | 0.9933 | 0.9207 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.5706 | 0.9946 | 0.9129 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.5858 | 0.9919 | 0.9229 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.5887 | 0.9986 | 0.9245 | N/A | no |
| F4K5W8 | SUS5_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7530 | 0.9919 | 0.8887 | yes | no |
| Q7XNX6 | SUS7_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7106 | 1.0 | 0.8760 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00023450001 | SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (816 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038825001 | SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (1031 aa) | • | • | • | 0.914 | ||||||
| GSVIVG00006423001 | SubName- Full=Chromosome chr11 scaffold_170, whole genome shotgun sequence; (1052 aa) | • | • | • | 0.914 | ||||||
| GSVIVG00034877001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (465 aa) | • | • | 0.905 | |||||||
| GSVIVG00038290001 | SubName- Full=Chromosome undetermined scaffold_92, whole genome shotgun sequence; (196 aa) | • | 0.899 | ||||||||
| GSVIVG00035830001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (828 aa) | • | 0.899 | ||||||||
| CWINV | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa) | • | 0.899 | ||||||||
| GSVIVG00032196001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (563 aa) | • | 0.899 | ||||||||
| GSVIVG00030060001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (459 aa) | • | 0.899 | ||||||||
| GSVIVG00027920001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (927 aa) | • | 0.899 | ||||||||
| GSVIVG00021585001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (572 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 749 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-118 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 8e-59 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 4e-31 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 3e-27 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 4e-22 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-20 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 3e-17 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-17 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 5e-15 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 5e-15 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 9e-15 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-14 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 3e-14 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 5e-13 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 7e-13 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 2e-12 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 4e-11 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 6e-11 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 1e-10 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 2e-10 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-10 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 4e-10 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 6e-10 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-09 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-09 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 5e-09 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 9e-09 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 1e-08 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 1e-08 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 3e-08 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 1e-07 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 1e-07 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-07 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 2e-07 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 5e-06 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 5e-06 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 2e-05 | |
| PRK09922 | 359 | PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo | 6e-05 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 1e-04 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 3e-04 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 4e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.002 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 0.002 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1550 bits (4015), Expect = 0.0
Identities = 523/749 (69%), Positives = 621/749 (82%), Gaps = 1/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H L+DEL VIDD++ R ++L+G G IL STQEA+V+PP VA A+RP PG WE+V+
Sbjct: 43 LQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVR 102
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +LSVE +TV+++LKFKE + D W D LE+DF + S P+ TLSSSIGNG+
Sbjct: 103 VNVSELSVEELTVSEYLKFKEELVDGSWN-DNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++KL ++ +PL+D+L + +H+GE LM+ND + T KLQ AL AE LS L
Sbjct: 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKL 221
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
PKDTPY +FE RF+E G EKGWG TAERV ET+ L ++LQAPDP +EKFL +P++FN
Sbjct: 222 PKDTPYSEFEHRFQELGLEKGWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFN 281
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVIFSPHGYFGQA+VLGLPDTGGQVVYILDQV+ALE E+LLRIKQQGL IKPQI++VTRL
Sbjct: 282 VVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRL 341
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
IPDA+GT CNQ LE + GT+HS+ILRVPF+T+KGIL +W+SRFDV+PYLE FA+DA + I
Sbjct: 342 IPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L L GKPDLIIGNYSDGNLVAS++A KLG+TQ TIAHALEKTKY DSD+ WK+ D KYH
Sbjct: 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYH 461
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN DFII ST+QEIAGSKD GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 462 FSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 521
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD S+YFPYTEKQ+RLT HP IEELLY+ E N+EHIGYL DRKKPIIFSMAR
Sbjct: 522 FNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMAR 581
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNLTGL EWYGKNKRLR LVNLV+VG F DPSKSKDREE AEIKKMH+L+EKY LK
Sbjct: 582 LDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWIAAQ++R+RNGELYR IADTKGAFVQPALYEAFGLTV+EAM CGLPTFAT QGGP
Sbjct: 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP 701
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIVDGVSGFHIDPY+GDE+++KIADFFE CK DP+YWNK S GL+RI ECYTWKIYA
Sbjct: 702 AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYA 761
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
++L +G +Y FWK ++K ++ +RY+E
Sbjct: 762 ERLLTLGGVYGFWKYVSKLERRETRRYLE 790
|
Length = 815 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 1214 bits (3144), Expect = 0.0
Identities = 457/747 (61%), Positives = 575/747 (76%), Gaps = 2/747 (0%)
Query: 4 HDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNS 63
H L+DE + D D ++ E LG ++ STQEA+V+PP VA A+RP G WE+V+VN
Sbjct: 22 HQLLDEFEQYCSDADKEKKLSESPLGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNV 81
Query: 64 DDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVS 123
++LSVE +T++++L FKE + + A D N LE+DF + S P+ + S SIGNG+ F++
Sbjct: 82 EELSVEELTISEYLDFKEQLVNG-HANDPNVLELDFEPFNASFPRPSDSKSIGNGVQFLN 140
Query: 124 KFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTLPKD 183
+ +++KL + +PL+++L ++ G +LMIND + + LQ L AE LS LP D
Sbjct: 141 RHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPD 200
Query: 184 TPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVI 243
TPY +FE +E GFE GWG TA+RV ET+ L ++L+APDP +E FL +P++FNVVI
Sbjct: 201 TPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPSVLEAFLGRIPMVFNVVI 260
Query: 244 FSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303
SPHGYFGQ +VLGLPDTGGQVVYILDQV+ALE E+L RIK QGL I P+I++VTRLIPD
Sbjct: 261 LSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320
Query: 304 ARGTKCNQELEPIEGTKHSNILRVPFKTDKGI-LHRWVSRFDVYPYLEGFAQDATTMILE 362
A GT CNQ LE + GT+H+ ILRVPF+T+ GI L W+SRF+++PYLE FA+DA IL
Sbjct: 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILA 380
Query: 363 FLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFS 422
L GKPDLIIGNYSDGNLVAS++A KLG+TQ TIAHALEKTKY DSD+ W+E + KYHFS
Sbjct: 381 ELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440
Query: 423 CQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFN 482
CQF AD IAMNA DFII ST+QEIAG+KD GQYESH AFT+PGL RVV GIDV DPKFN
Sbjct: 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFN 500
Query: 483 IAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLD 542
I +PGAD+S+YFPY++K++RLT HPEIEELL++ EDN+EH GYL D KPIIFSMARLD
Sbjct: 501 IVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560
Query: 543 VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602
VKNLTGL E YG++ +LR LVNLV+V D +SKDREE AEI+KMH L+++YQL GQ
Sbjct: 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQ 620
Query: 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE 662
+RWI AQ +R+RNGELYR IADTKG FVQPALYEAFGLTV+EAM CGLPTFAT GGP E
Sbjct: 621 IRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLE 680
Query: 663 IIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722
II DGVSGFHIDPY+G+E+++KI DFFE C DP+YW K S GL+RI E YTWKIY+ +
Sbjct: 681 IIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSER 740
Query: 723 MLNMGCMYSFWKQLNKGQKLAKQRYIE 749
+L + +Y FWK ++K ++ +RY+E
Sbjct: 741 LLTLAGIYGFWKFVSKLEREETRRYLE 767
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 706 bits (1824), Expect = 0.0
Identities = 306/516 (59%), Positives = 392/516 (75%), Gaps = 1/516 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ H L+ E ++ ++ + G G ++ S QEA+V+PP VA A+RP PG WE+V+
Sbjct: 36 LQPHQLIAEYEAILGEDRAKLDDKNGAFGEVIKSAQEAIVLPPWVALAVRPRPGVWEYVR 95
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN +L VE ++V ++L+FKE + D + D LE+DF + S P+ TLS SIGNG+
Sbjct: 96 VNVHELVVEELSVPEYLQFKEELVDGS-SNDNFVLELDFEPFNASFPRPTLSKSIGNGVQ 154
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ +++K+ +D PL+++L ++G+ LM+ND + LQ AL AE LSTL
Sbjct: 155 FLNRHLSSKMFHDKDSLHPLLEFLRLHTYKGKTLMLNDRIQNISALQSALRKAEDYLSTL 214
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
P DTPY +FE +F+E GFE+GWG TAERV E M L ++L+APDP +E FL +P++FN
Sbjct: 215 PPDTPYSEFEHKFQEIGFERGWGDTAERVLEMMHLLLDLLEAPDPSTLETFLGRIPMVFN 274
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYF QA+VLG PDTGGQVVYILDQV+ALE E+L+RIKQQGL I P+I++VTRL
Sbjct: 275 VVILSPHGYFAQANVLGYPDTGGQVVYILDQVRALESEMLVRIKQQGLDITPRILIVTRL 334
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+PDA GT CNQ LE + GT+H++ILRVPF+T+KGIL +W+SRF+V+PYLE FA+D + I
Sbjct: 335 LPDAVGTTCNQRLEKVFGTEHTHILRVPFRTEKGILRKWISRFEVWPYLETFAEDVASEI 394
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
L KPDLIIGNYSDGNLVAS++A KLG+TQ TIAHALEKTKY DSD+ WK+ + KYH
Sbjct: 395 AAELQAKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFEKKYH 454
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD IAMN DFII STFQEIAGSKD GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 455 FSCQFTADLIAMNHADFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 514
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYN 516
FNI +PGAD ++YFPYTEK++RLT HPEIEELLY+
Sbjct: 515 FNIVSPGADMTIYFPYTEKEKRLTALHPEIEELLYS 550
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-118
Identities = 140/488 (28%), Positives = 201/488 (41%), Gaps = 94/488 (19%)
Query: 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTR 299
+ + S HG G DTGGQ VY+L+ +AL G ++ + TR
Sbjct: 1 RIALISLHGSPLAQP--GGADTGGQNVYVLELARALAR--------LG----HEVDIFTR 46
Query: 300 LIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359
I DA +E ++RVP + + + +++PYL+ FA D
Sbjct: 47 RIDDALP-------PIVELAPGVRVVRVPAGPAEYL-----PKEELWPYLDEFADD---- 90
Query: 360 ILEFL---GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELD 416
+L FL GG+PDLI +Y D LVA ++A +LGI H+L K
Sbjct: 91 LLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADT--- 147
Query: 417 PKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476
Y + + A+ + A D +IAST QE G Y
Sbjct: 148 --YEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRR----------------- 188
Query: 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIF 536
+ PG D + PY + R + L D KP I
Sbjct: 189 ----IRVVPPGVDLERFTPYGRAEARRARL--------------------LRDPDKPRIL 224
Query: 537 SMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK 596
++ RLD K + L Y + LR NLVIVG D + D EE E+ + ++++
Sbjct: 225 AVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDR 284
Query: 597 YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656
G++ R LYR FV PALYE FGLT +EAM CGLP AT
Sbjct: 285 VDFPGRV-------SREDLPALYR----AADVFVNPALYEPFGLTALEAMACGLPVVATA 333
Query: 657 QGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716
GGP +I+VDGV+G +DP + + + + DP + S GL+R YTW
Sbjct: 334 VGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLT----DPALRRRLSRAGLRRARARYTW 389
Query: 717 KIYANKML 724
+ A ++L
Sbjct: 390 ERVAARLL 397
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 8e-59
Identities = 138/495 (27%), Positives = 235/495 (47%), Gaps = 69/495 (13%)
Query: 241 VVIFSPHGYFGQADV-LGL-PDTGGQVVYILDQVKAL--EEELLLRIKQQGLYIKPQIVV 296
+++ S HG D+ LG DTGGQ Y+L+ +AL E+ Q+ +
Sbjct: 3 LLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEV------------EQVDL 50
Query: 297 VTRLIPDAR-GTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQD 355
VTRLI DA+ Q +E I + I+R+PF R++ + ++PYL+ A +
Sbjct: 51 VTRLIKDAKVSPDYAQPIERI--APGARIVRLPFGP-----RRYLRKELLWPYLDELADN 103
Query: 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYE---DSDVKW 412
+ + G PDLI +Y+D V + ++ LG+ H+L + K + +K
Sbjct: 104 LLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKP 162
Query: 413 KELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVK 472
++++ +Y+ S + A+ + +I ST QEI Y+ P +V+
Sbjct: 163 QQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQ-------PERMQVI- 214
Query: 473 GIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKK 532
PG D S ++P + EI+ LL +L D +K
Sbjct: 215 ------------PPGVDLSRFYPPQSSEET-----SEIDNLL---------APFLKDPEK 248
Query: 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHA 592
P I +++R D KN+ L E YG++ +L+ + NLV+V D + + ++ ++K+
Sbjct: 249 PPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLL 308
Query: 593 LMEKYQLKGQMRWIAA-QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651
L+++Y L G++ + + D + ELYR A ++G FV PAL E FGLT++EA CGLP
Sbjct: 309 LIDRYDLYGKVAYPKHHRPDDVP--ELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLP 366
Query: 652 TFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711
AT+ GGP +II + +G +D + + IA E D + W +S G++ +
Sbjct: 367 IVATDDGGPRDIIANCRNGLLVDVLDLEA----IASALEDALSDSSQWQLWSRNGIEGVR 422
Query: 712 ECYTWKIYANKMLNM 726
Y+W + K L +
Sbjct: 423 RHYSWDAHVEKYLRI 437
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 4e-31
Identities = 141/530 (26%), Positives = 242/530 (45%), Gaps = 98/530 (18%)
Query: 241 VVIFSPHGYF-GQADVLGL-PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVT 298
+V+ S HG G+ LG DTGGQV Y+++ +AL G+Y ++ ++T
Sbjct: 172 IVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALG-------SMPGVY---RVDLLT 221
Query: 299 RLI--PD-------------ARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRF 343
R + PD R ++ + + E E + + I+R+PF G +++ +
Sbjct: 222 RQVSSPDVDWSYGEPTEMLTPRSSENDGD-EMGESSG-AYIIRIPF----GPRDKYIPKE 275
Query: 344 DVYPYLEGFAQDATTMIL-------EFLGGK----PDLIIGNYSDGNLVASVMASKLGIT 392
+++PY+ F A + I+ E +G P +I G+Y+D A++++ L +
Sbjct: 276 ELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVP 335
Query: 393 QATIAHALEKTKYED----SDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAG 448
H+L + K E + +E++ Y + A+ ++++A++ +I ST QEI
Sbjct: 336 MVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEE 395
Query: 449 SKDRPGQYESHTAFTLPGLCRVVK-----GIDVLD---PKFNIAAPGADQSVYFPYTEKQ 500
Q+ + F L R ++ G+ P+ + PG + S P+
Sbjct: 396 ------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDM 448
Query: 501 RRLTKFHPEIEELLYNKEDN---NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557
T+ + E K D +E + + + +KP+I ++AR D KN+T L + +G+
Sbjct: 449 DGETEGNEEHPA----KPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGEC 504
Query: 558 KRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHA--------LMEKYQLKGQMRWIA- 607
+ LR L NL I+G +R++ E+ + L++KY L GQ+ +
Sbjct: 505 RPLRELANLTLIMG---------NRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKH 555
Query: 608 -AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666
QSD ++YR A TKG F+ PA E FGLT+IEA GLP AT GGP +I
Sbjct: 556 HKQSDV---PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRV 612
Query: 667 GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716
+G +DP+ IAD D W + GLK I+ ++W
Sbjct: 613 LDNGLLVDPH----DQQAIADALLKLVADKQLWAECRQNGLKNIHL-FSW 657
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 3e-27
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKM 590
KPII + RL K L L E + K + LVIVG + E KK+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVG-------DGEEE-----KKL 48
Query: 591 HALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 650
L K L+ + ++ D ELYR IAD FV P+ YE FGL ++EAM G+
Sbjct: 49 KKLALKLGLEDNVIFVGFVPDE-DLIELYR-IAD---LFVLPSRYEGFGLVLLEAMAAGV 103
Query: 651 PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKR 709
P AT+ GGPAEI+ DG +G +DP + + ++ I + D + KR
Sbjct: 104 PVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLK----DEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 4e-22
Identities = 92/468 (19%), Positives = 151/468 (32%), Gaps = 108/468 (23%)
Query: 258 LPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIE 317
P GG ++L+ +AL +G ++ V+T
Sbjct: 10 PPSVGGAERHVLELARAL--------AARGH----EVTVLTPGDGGLP------------ 45
Query: 318 GTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSD 377
+ GI+ L A + + D++ +
Sbjct: 46 ----------DEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWL 95
Query: 378 GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDF 437
L A++ A LGI H LE EL + A+ D
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLE------FGRPGNELGLLLKLARALER--RALRRADR 147
Query: 438 IIA-STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPY 496
IIA S +++ + + V K + G D + P
Sbjct: 148 IIAVSEA-----TREE-----------------LRELGGVPPEKITVIPNGVDTERFRPA 185
Query: 497 TEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556
RR +P+I + RL K + L E K
Sbjct: 186 PRAARRR----------------------LGIPEDEPVILFVGRLVPRKGVDLLLEALAK 223
Query: 557 NKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNG 616
++ V LVIVG D E++ AL + L ++ ++ D
Sbjct: 224 LRKEYPDVRLVIVG---------DGPLREELE---ALAAELGLGDRVTFLGFVPDEDLP- 270
Query: 617 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY 676
LY AD FV P+LYE FGL ++EAM GLP A++ GG E++ DG +G + P
Sbjct: 271 ALYAA-AD---VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPG 326
Query: 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
+ + ++ I + DP + +R+ E ++W A +
Sbjct: 327 DPEALAEAILRLLD----DPELRRRLGEAARERVAERFSWDRVAARTE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 92.7 bits (229), Expect = 4e-20
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE----HIGYLADRKKPII 535
AD+ + K+ P ++ N D + IG L + K ++
Sbjct: 143 LKKALRLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPARIGLLPEGGKFVV 202
Query: 536 FSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME 595
+ RLD K L L E K K+ + LVIVG + +++ L +
Sbjct: 203 LYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAK 251
Query: 596 KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655
K L+ ++++ D EL +A FV P+L E FGL ++EAM G P A+
Sbjct: 252 KLGLEDNVKFLGYVPDE----ELAELLASAD-VFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715
+ GG E++ DG +G + P + +E +D + E DP + +R+ E ++
Sbjct: 307 DVGGIPEVVEDGETGLLVPPGDVEELADALEQLLE----DPELREELGEAARERVEEEFS 362
Query: 716 WKIYANKMLN 725
W+ A ++L
Sbjct: 363 WERIAEQLLE 372
|
Length = 381 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 3e-17
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 31/235 (13%)
Query: 493 YFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTE 552
Y ++ ++ E + L +P + ++ KNL L E
Sbjct: 158 YLGVPPD--KIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLE 215
Query: 553 WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612
+ + LVIVG K E+ A + + L ++R++ SD
Sbjct: 216 AFARLPAKGPDPKLVIVG--------KRGWLNEEL---LARLRELGLGDRVRFLGYVSDE 264
Query: 613 -LRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA--EIIVDGVS 669
L LYR A AFV P+LYE FGL V+EAM CG P A+N + E+ D +
Sbjct: 265 ELA--ALYRG-AR---AFVFPSLYEGFGLPVLEAMACGTPVIASN--ISSLPEVAGD--A 314
Query: 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
+ DP + + + I E DP + GL R ++W+ A + L
Sbjct: 315 ALYFDPLDPEALAAAIERLLE----DPALREELRERGLARAKR-FSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 5e-17
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 33/220 (15%)
Query: 510 IEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIV 569
++ ++ D E K +I + RL K + L E + + R V+LVIV
Sbjct: 180 VDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIV 239
Query: 570 GAFFDPSKSKDREETAEIKKMHALMEKYQLKG-----QMRWIAAQSDRLRNGELYRCIAD 624
G P + AE L ++ G ++ A +D
Sbjct: 240 GD--GPLREALEALAAE----LGLEDRVTFLGAVPHEEVPAYYAAAD------------- 280
Query: 625 TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684
FV P+L E FGL ++EAM CGLP AT+ GG EII DG +G + P + + ++
Sbjct: 281 ---VFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337
Query: 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
I DP W + +R+ E ++W+ A ++L
Sbjct: 338 ILRLLA----DP--WLRLGRAARRRVAERFSWENVAERLL 371
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 5e-15
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Query: 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD-RLRNGELYRCI 622
V L++VG + + + E +EK L+G++ ++ + D EL
Sbjct: 220 VRLLLVGDGDEENPAAILE-----------IEKLGLEGRVEFLGFRDDVP----ELLA-A 263
Query: 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS 682
AD FV P+ E ++EAM G P AT+ G E ++DGV+GF + P + + +
Sbjct: 264 AD---VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320
Query: 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725
D I E DP + KR E + +I K+L
Sbjct: 321 DAIERLIE----DPELRARMGQAARKRAEEEFDEEIVVKKLLE 359
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 5e-15
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETA-EI 587
DR +P I + R+ K + L + + V +V+ + D E A E+
Sbjct: 198 DRSRPYILFVGRITRQKGVPHLLD---AVHYIPKDVQVVLCAG------APDTPEVAEEV 248
Query: 588 KKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMN 647
++ AL+++ + + WI + L EL + FV P++YE G+ +EAM
Sbjct: 249 RQAVALLDRN--RTGIIWI---NKMLPKEEL-VELLSNAEVFVCPSIYEPLGIVNLEAMA 302
Query: 648 CGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS--DKIADFFEACKVDPTYWNKFSTE 705
CG P A+ GG E++VDG +GF + P N D ++A DP K
Sbjct: 303 CGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIA 362
Query: 706 GLKRINECYTWKIYANKMLNM 726
G KR E ++W A K + M
Sbjct: 363 GRKRAEEEFSWGSIAKKTVEM 383
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 9e-15
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 27/210 (12%)
Query: 512 ELLYN-------KEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLV 564
E++YN + E + P+I ++ RL K L + ++
Sbjct: 162 EVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA 221
Query: 565 NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD 624
LVI+G D E++ L ++ L ++ ++ QS+ Y +
Sbjct: 222 RLVILG---------DGPLREELEA---LAKELGLADRVHFLGFQSNP------YPYLKA 263
Query: 625 TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684
FV + YE F ++EAM G P AT+ GP EI+ DG +G + P + +
Sbjct: 264 AD-LFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGL-LVPVGDEAALAA 321
Query: 685 IADFFEACKVDPTYWNKFSTEGLKRINECY 714
A +DP + + +R+ Y
Sbjct: 322 AALALLDLLLDPELRERLAAAARERVAREY 351
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 1e-14
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 27/198 (13%)
Query: 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAE 586
+D K I ++ RL K L E + K + L IVG D E
Sbjct: 173 SSDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVG---------DGPEREA 223
Query: 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGA-FVQPALYEAFGLTVIEA 645
++ L+++ L+ ++ + + E Y K + FV + +E F + ++EA
Sbjct: 224 LEA---LIKELGLEDRVILLGFTKNI---EEYYA-----KASIFVLTSRFEGFPMVLLEA 272
Query: 646 MNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFST 704
M GLP + + GP+EII DGV+G + + + ++ + E D +
Sbjct: 273 MAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLME----DEELRKRMGA 328
Query: 705 EGLKRINECYTWKIYANK 722
+ E ++ + +
Sbjct: 329 NARESA-ERFSIENIIKQ 345
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 3e-14
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS 682
AD FV P+ E FGL V+EAM GLP A + GGPA+I+ DG +G ++P + + +
Sbjct: 267 AD---VFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFA 323
Query: 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
+A DP + + E +W+ + + +L
Sbjct: 324 AALAALLA----DPELRRRMAARARAEA-ERRSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 5e-13
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 23/197 (11%)
Query: 530 RKKPIIFSMARLDVVKNLTGLTEWYGK-NKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588
K II + RL K L L E + K +R + LVI G P E
Sbjct: 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWH-LVIAG----PD------EGGYRA 249
Query: 589 KMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNC 648
++ + L+ ++ + + L AD FV P+ E FG+ V EA+ C
Sbjct: 250 ELKQIAAALGLEDRVTFTGMLYGEDKAAALAD--AD---LFVLPSHSENFGIVVAEALAC 304
Query: 649 GLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708
G P T++ E+I G G+ +D + D + + E P G
Sbjct: 305 GTPVVTTDKVPWQELIEYGC-GWVVDD-DVDALAAALRRALE----LPQRLKAMGENGRA 358
Query: 709 RINECYTWKIYANKMLN 725
+ E ++W A ++L
Sbjct: 359 LVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 7e-13
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS 682
AD FV P+L E F T IEA+ CG P A + GG +I+ GV+G+ P + ++ +
Sbjct: 265 AD---VFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLA 321
Query: 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726
+ I E DP + + + ++ A + L++
Sbjct: 322 EGI----EWLLADPDEREELGEAARELAENEFDSRVQAKRYLSL 361
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 2e-12
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 621 CIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680
IAD F+ P+ E+FGL +EAM CG+P A+N GG E++ G +GF +D + +
Sbjct: 269 SIADL---FLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEA 325
Query: 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712
++ E D W +FS R E
Sbjct: 326 MAEYALSLLE----DDELWQEFSRAARNRAAE 353
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 4e-11
Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 534 IIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHAL 593
+ RL K L L E + K + LVI G +RE E+
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAG------DGPEREYLEELL----- 154
Query: 594 MEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTF 653
L ++ ++ L AD FV P+L E FGL V+EAM CGLP
Sbjct: 155 -AALLLLDRVIFLGGLDPEELLALLLA-AAD---VFVLPSLREGFGLVVLEAMACGLPVI 209
Query: 654 ATNQGGPAEIIVDGVSGFHI 673
AT+ GGP EI+ DG++G +
Sbjct: 210 ATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 6e-11
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 529 DRKKPI---IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETA 585
+RKK I I + A L L E+ V LVI G + DP +++ E
Sbjct: 221 ERKKNIALAIEAFAIL-----KDKLAEFKN--------VRLVIAGGY-DPRVAENVEYLE 266
Query: 586 EIKKMHALMEKYQ-LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY----EAFGL 640
E+++ L E+ L+ Q+ ++ + SD + L A LY E FG+
Sbjct: 267 ELQR---LAEELLLLEDQVIFLPSISDSQKELLLSSARA---------LLYTPSNEHFGI 314
Query: 641 TVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWN 700
+EAM G P A N GGP E +VDG +GF +P +E ++ + DP +
Sbjct: 315 VPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLAN----DPDLAD 369
Query: 701 KFSTEGLKRINE 712
+ G KR+ E
Sbjct: 370 RMGAAGRKRVKE 381
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 1e-10
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588
+P++ + RL KN+ L + + + V LVIVG D E E++
Sbjct: 199 PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVG---------DGPEREELE 249
Query: 589 KMHALMEKYQLKGQMRWIAAQS-DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMN 647
+ L + L ++ + + L + Y+ AD FV + E GL ++EAM
Sbjct: 250 E---LARELGLADRVIFTGFVPREELP--DYYKA-AD---LFVFASTTETQGLVLLEAMA 300
Query: 648 CGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707
GLP A + G +++ DG +GF P + + +A+ DP + S
Sbjct: 301 AGLPVVAVDAPGLPDLVADGENGFLFPPGD-----EALAEALLRLLQDPELRRRLSKNAE 355
Query: 708 KR 709
+
Sbjct: 356 ES 357
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKV 694
E F L + EA+ G+P A++ GG AE++ DGV+G P + ++ + + +
Sbjct: 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLID---- 328
Query: 695 DPTYW 699
DP
Sbjct: 329 DPDLL 333
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 3e-10
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 534 IIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHA- 592
+I ++ RL K+ L + + K + L+I G D A ++++
Sbjct: 190 VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAG---------DGPLRATLERLIKA 240
Query: 593 --LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 650
L + +L G IAA Y AD FV + +E FGL V EAM C L
Sbjct: 241 LGLSNRVKLLGLRDDIAA----------YYNAADL---FVLSSAWEGFGLVVAEAMACEL 287
Query: 651 PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689
P AT+ GG E++ D SG + + + ++KI +
Sbjct: 288 PVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 4e-10
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 621 CIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680
I+D F+ P+ E+FGL +EAM CG+P A+N GG E++ GV+GF D + +
Sbjct: 271 SISDL---FLLPSEKESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVET 327
Query: 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714
++ E D +FS +R E +
Sbjct: 328 MAEYAISLLE----DEELLQRFSAAARERAKERF 357
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 6e-10
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 627 GAFVQPALYEAFGLTVIEAMNCGLP--TFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684
+ + E FGL+++EA++ GLP ++ N GP+EII DG +G+ + + + ++
Sbjct: 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY-GPSEIIEDGENGYLVPKGDIEALAEA 338
Query: 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721
I + DP KFS + ++
Sbjct: 339 IIELLN----DPKLLQKFSEAAYENAERYSEENVWEK 371
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 2e-09
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 526 YLADRKKPIIFSMARLDVVKNLTGLTEWYGKN------KRLRNL---VNLVIVGAFFDPS 576
+ + KP+I RL T W G+ RL+ V+L+IVG D
Sbjct: 179 WPLPKGKPVILLPGRL---------TRWKGQEVFIEALARLKKDDPDVHLLIVG---DAQ 226
Query: 577 KSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALY 635
+ AE+ ++ +++ L+ ++ ++ SD + Y +AD A +P
Sbjct: 227 GRRFY--YAELLEL---IKRLGLQDRVTFVGHCSD-MP--AAYA-LADIVVSASTEP--- 274
Query: 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691
EAFG T +EA G P A++ GG E + G +G + P + + + +
Sbjct: 275 EAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSL 330
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-09
Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 58/228 (25%)
Query: 503 LTKFHPEIEELLYNKEDNNEHIGYLADRKKPI--IFSMARLDVVKNLTGLTEWYGKNKRL 560
KF P + +G ++K P+ + + ARL +R+
Sbjct: 176 TAKFTPATPA---RRPPRILFVGRFVEKKGPLLLLEAFARL---------------ARRV 217
Query: 561 RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS-----DRLRN 615
V LVI+G D A + AL L G++ ++ AQ + +R
Sbjct: 218 PE-VRLVIIG---------DGPLLAA---LEALARALGLGGRVTFLGAQPHAEVRELMRR 264
Query: 616 GELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS 669
+ F+QP++ E + ++EA G+P AT GG E + DG +
Sbjct: 265 ARI----------FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGET 314
Query: 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717
G + + + + DP + G +R+ E + +
Sbjct: 315 GLLVPEGDVAALAAALGRLLA----DPDLRARMGAAGRRRVEERFDLR 358
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 5e-09
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687
E FGL +IEAM CG P A +G E++ DGV+GF +D +E + +A
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSV--EELAAAVAR 304
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 9e-09
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 31/210 (14%)
Query: 516 NKEDNNEHIGYLA-----DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVG 570
N+E + I Y+ D ++P I ++R D K+ G+ + Y K K LV+VG
Sbjct: 169 NRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVG 228
Query: 571 AFF--DPSKSKDREETAEIKKMH---ALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT 625
+ DP EE E + ++ + SD N L R +
Sbjct: 229 SGATDDPEGWIVYEEVLEYAEGDPDIHVLT----------LPPVSDLEVNA-LQRA-STV 276
Query: 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKI 685
+Q ++ E FGLTV EA+ G P A GG I DG +GF +D +E++ +I
Sbjct: 277 ---VLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRI 331
Query: 686 ADFFEACKVDPTYWNKFSTEGLKRINECYT 715
DP K + + E +
Sbjct: 332 LYLLR----DPELRRKMGANAREHVRENFL 357
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 1e-08
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 24/184 (13%)
Query: 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588
+I +ARL K+ L + L++VG D + A ++
Sbjct: 190 PEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVG---------DGPDRANLE 240
Query: 589 KMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNC 648
+ +++ L+ ++ + +SD L D FV +L E F ++EAM C
Sbjct: 241 LL--ALKELGLEDKVILLGERSDV---PALLN-ALD---VFVLSSLSEGFPNVLLEAMAC 291
Query: 649 GLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708
GLP AT+ G AE++ D +GF + P + + ++ I DP +
Sbjct: 292 GLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLA----DPALRQALGEAARE 345
Query: 709 RINE 712
RI E
Sbjct: 346 RIEE 349
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 25/124 (20%)
Query: 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELY-RCIAD 624
LV++G D E ++ + ++ SD +LY R A
Sbjct: 224 LVVIG---------DGPELDRLRAK--------AGPNVTFLGRVSDEELR-DLYARARA- 264
Query: 625 TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684
F+ PA E FG+ +EAM G P A +GG E ++DGV+G + + +
Sbjct: 265 ----FLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAA 319
Query: 685 IADF 688
+ F
Sbjct: 320 VERF 323
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 3e-08
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS-DRLRNGELYRCI 622
L IVG D E++ AL+ + L+ ++ + A+S + +R EL R
Sbjct: 211 FRLDIVG---------DGPLRDELE---ALIAELGLEDRVTLLGAKSQEEVR--ELLRA- 255
Query: 623 ADTKGAFVQPAL------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY 676
AD FV P++ E + ++EAM GLP +T+ G E++ DG +G + P
Sbjct: 256 AD---LFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPG 312
Query: 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712
+ + +D I + DP + G R+ E
Sbjct: 313 DPEALADAIERLLD----DPELRREMGEAGRARVEE 344
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 629 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADF 688
FV P+L E T++EAM GLP AT GG E++ GV+G + P + + + +
Sbjct: 276 FVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPY 335
Query: 689 FEACKVDPTYWNKFSTEGLKRINECYTW 716
DP G R + ++
Sbjct: 336 VS----DPAARRAHGAAGRARAEQQFSI 359
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 26/161 (16%)
Query: 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT 625
LVIVG E ++ AL L ++R++ D E +A
Sbjct: 221 LVIVG------------EGPLEAELEALAAALGLLDRVRFLGRLDDE----EKAALLAAC 264
Query: 626 KG-AFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGDESSD 683
F EAFG+ ++EAM G P +T G + + + GV+G + P + ++
Sbjct: 265 DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAE 324
Query: 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
I E DP + +R E +T A++M+
Sbjct: 325 AIRRLLE----DPELRERLGEAARERAEEEFT----ADRMV 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 27/201 (13%)
Query: 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDRE------ 582
+ ++ R+ K + L + + K + + LV+VG SK +
Sbjct: 190 SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249
Query: 583 ETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTV 642
E A+ +M Q +M Y +AD V + EAF +
Sbjct: 250 EAAKRIGDRCIMLGGQPPEKMH------------NYYP-LADL--VVVPSQVEEAFCMVA 294
Query: 643 IEAMNCGLPTFATNQGGPAEIIVDGVSGFHI-DPYNGDESSDKIADFFEACKVDPTYWNK 701
+EAM G P A+ +GG E +++G++G+H+ +P +SD I DP
Sbjct: 295 VEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPM----TSDSIISDINRTLADPELTQ- 349
Query: 702 FSTEGLKRINECYTWKIYANK 722
+ + + Y+W+ +
Sbjct: 350 IAEQAKDFVFSKYSWEGVTQR 370
|
Length = 380 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 617 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY 676
ELY+ IAD V P+ +E IE M GLP T G +E+I DG++G+ I
Sbjct: 296 ELYQ-IADVG---VLPSFHEQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIK 351
Query: 677 NGDESSD----KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726
+ + ++ + +R E Y+ ++ M ++
Sbjct: 352 EYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMRENMKSL 405
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-06
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVD------GVSGFHIDPYNGDESSDKIADFF 689
E L ++EAM G+P AT+ G E+I G +G + P + +A
Sbjct: 381 EGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPP----ADPEALARAI 436
Query: 690 EACKVDPTYWNKFSTEGLKRINECYTW 716
DP G KR+ YT
Sbjct: 437 LRLLKDPELRRAMGEAGRKRVERYYTL 463
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 5e-06
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 598 QLKGQMRWIAAQ-SDRLR-----NGELYRCI---ADTKGAFVQPALYEAFGLTVIEAMNC 648
+L+ +R +A + +R + L I AD + P+ +E GLT + AM
Sbjct: 332 ELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD---FILMPSRFEPCGLTQLYAMRY 388
Query: 649 GLPTFATNQGGPAEIIVDGV------SGFHIDPYNGDESSDKIADFFEACKVDPTYWN 700
G GG A+ +VDG +GF + Y+ ++ + DP+ W
Sbjct: 389 GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWE 446
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 47/158 (29%), Positives = 64/158 (40%), Gaps = 28/158 (17%)
Query: 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMH 591
KP+I + RL KNL L +RL L VG D E++KM
Sbjct: 263 KPLIVYVGRLGAEKNLDFLKRVM---ERLPG-ARLAFVG---------DGPYREELEKMF 309
Query: 592 ALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651
A G + Q D EL + A + FV P+ E G V+EAM G+P
Sbjct: 310 AGTPT-VFTGML-----QGD-----ELSQAYA-SGDVFVMPSESETLGFVVLEAMASGVP 357
Query: 652 TFATNQGGPAEIIVD---GVSGFHIDPYNGDESSDKIA 686
A GG +II G +GF P + D+ +K+
Sbjct: 358 VVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLE 395
|
Length = 465 |
| >gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 6e-05
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 628 AFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGDESSDKIA 686
A + + +E F +T++EAM+ G+P +++ GP +II G++G P N DE K+
Sbjct: 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLN 319
Query: 687 DFFE 690
Sbjct: 320 KVIS 323
|
Length = 359 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 618 LYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYN 677
LYRC AD AF P+L E FGL V+EA+ G+P A++ P + DP +
Sbjct: 273 LYRC-AD---AFAFPSLKEGFGLVVLEALASGIPVVASDI-APFTEYLGRFDAAWADPSD 327
Query: 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716
D +D +A +DP + YTW
Sbjct: 328 PDSIADALAL-----ALDPARRPAL-LAAGPELAARYTW 360
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 630 VQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID 674
P+ E+FGL +EA CG P A GG + DG +G +D
Sbjct: 307 AVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVD 351
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 23/167 (13%)
Query: 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR-LRNGELYRCI 622
V L++ G + E A +++ L ++ +I +R L + EL
Sbjct: 217 VRLLVAGETHPDLERYRGEAYALAERL-------GLADRVIFI----NRYLPDEELPELF 265
Query: 623 ADTKGAFVQP---ALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGD 679
+ V P A G + A+ G P +T G E ++DG +G + P +
Sbjct: 266 SAAD-VVVLPYRSADQTQSG-VLAYAIGFGKPVISTPVGHAEE-VLDGGTGLLVPPGDPA 322
Query: 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726
++ I DP + +W+ A + L +
Sbjct: 323 ALAEAIRRLLA----DPELAQAL-RARAREYARAMSWERVAERYLRL 364
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 38/170 (22%)
Query: 505 KFHPEIEE---LLYNKEDNNE--HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559
F+ EI + L ED H+G R KN L E + + +
Sbjct: 174 IFNEEIRKKRRELGILEDKFVIGHVG--------------RFSEQKNHEFLIEIFAELLK 219
Query: 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELY 619
L++VG D E EIKK +++ L+ ++ ++ ++D EL
Sbjct: 220 KNPNAKLLLVG---------DGELEEEIKKK---VKELGLEDKVIFLGVRNDVP---ELL 264
Query: 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS 669
+ D F+ P+LYE L +IEA GLP ++ + D V
Sbjct: 265 Q-AMD---VFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLVK 310
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 642 VIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNK 701
+ E M G P A+ G AE++ + +G + P + +A DP +
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPP----GDPEALAAAILELLDDPEERAE 371
Query: 702 FSTEGLKRINECYTWKIYANKML 724
G + + E ++ + A ++L
Sbjct: 372 MGENGRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 749 | |||
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.98 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.97 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.97 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.96 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.91 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.87 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.87 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.86 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.84 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.84 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.8 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.79 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.79 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.76 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.75 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.75 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.75 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.72 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.68 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.62 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.59 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.55 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.5 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.38 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.32 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.28 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.24 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.22 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.22 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.22 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.17 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.14 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.1 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.97 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.97 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.88 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.85 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.82 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.71 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.7 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.66 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.5 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.34 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.34 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.32 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.3 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.26 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.23 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.05 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.03 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.93 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.84 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.71 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.61 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.57 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.51 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.49 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.44 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 97.37 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.27 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.16 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.93 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.83 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.79 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.7 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 96.68 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 96.6 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.59 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.57 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.57 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.48 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.46 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.42 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.3 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.3 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.28 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.22 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.03 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 95.83 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.83 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.62 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.57 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 95.5 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 94.82 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.03 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 93.82 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.21 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 93.14 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 92.15 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 90.32 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 89.85 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 89.13 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 86.38 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 85.92 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 85.02 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 84.47 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 83.88 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 83.33 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 83.21 | |
| PF03401 | 274 | TctC: Tripartite tricarboxylate transporter family | 81.71 | |
| PLN02764 | 453 | glycosyltransferase family protein | 81.56 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 80.76 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 80.13 |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-186 Score=1605.23 Aligned_cols=748 Identities=70% Similarity=1.167 Sum_probs=725.7
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||++++++..+++++.+|+||++|++||||||.|||||||||||||+|||||||++||+||+|||+|||+||
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~k 122 (815)
T PLN00142 43 LQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFK 122 (815)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhh
Confidence 68999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+++ +++++|||||+|||++|||+|+|+||||||+|||||||||||+|++++++||||||.|+|+|++|||||||
T Consensus 123 e~~~~~~~-~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~ 201 (815)
T PLN00142 123 EELVDGSW-NDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRI 201 (815)
T ss_pred HhhcCccc-CCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCC
Confidence 99999965 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++||+|++||||+||
T Consensus 202 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~ 281 (815)
T PLN00142 202 QTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFN 281 (815)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+||||+|.+++|.||||||++||+|||||||++|+++|+++||+|+|+|+|+||.+++..+++|+++++.+.+++
T Consensus 282 i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~ 361 (815)
T PLN00142 282 VVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTE 361 (815)
T ss_pred hheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+++|+|+|+++.++++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||++|++|.++++++|+|+|+|+|++
T Consensus 362 ~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL 441 (815)
T PLN00142 362 HSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHAL 441 (815)
T ss_pred ceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccc
Confidence 99999999999778999999999999999999999999988777789999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
++.|+..++.+|+..+..|+|++|+++|.++++.||+||++|+++++++++.++||++|.+|+||++|++++|++++.+|
T Consensus 442 ~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~k 521 (815)
T PLN00142 442 EKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 521 (815)
T ss_pred hhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
++|||||+|...|.|+.....+++.+++.|++++|++.+.++++|++.++++++|+++||+++.||++.|++|++++.+.
T Consensus 522 i~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l 601 (815)
T PLN00142 522 FNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL 601 (815)
T ss_pred eeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHh
Confidence 99999999999999999888888899999999999999999999988788899999999999999999999999999877
Q ss_pred CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcH
Q 036539 561 RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGL 640 (749)
Q Consensus 561 ~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGL 640 (749)
+++++|+|+|++.++..+.+.++.++++++.++++++++.++|+|+|.+.+..+.+++++++++++|+||+||.+|+||+
T Consensus 602 ~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 602 RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 78899999999855456667788888899999999999999999999888788889999999976899999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 720 (749)
+++|||+||+|||||+.||+.|+|.+|++|++++|+|++++|++|.+++++|..||+.|++|+++|++++.++|||+.++
T Consensus 682 vvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A 761 (815)
T PLN00142 682 TVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYA 761 (815)
T ss_pred HHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 721 ~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
++++++..+||||+++|+++|+|++||||
T Consensus 762 ~rll~L~~~~~~~~~~~~~~~~~~~~y~~ 790 (815)
T PLN00142 762 ERLLTLGGVYGFWKYVSKLERRETRRYLE 790 (815)
T ss_pred HHHHHHHhhcchhhhcchHhHHHHHHHHH
Confidence 99999999999999999999999999996
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-184 Score=1593.34 Aligned_cols=748 Identities=61% Similarity=1.047 Sum_probs=724.7
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||+++|.+..+++++.+|+||++|++||||||.|||||||||||||+|||||||++||+||+||++|||+||
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~k 98 (784)
T TIGR02470 19 LLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNVEELSVEELTISEYLDFK 98 (784)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHHhhhh
Confidence 68999999999999887778899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||++ .+++++|||||+|||++|||+|+||||||||+|||||||||||+|++++++||||||.|+|+|++|||||||
T Consensus 99 e~~~~~~-~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 177 (784)
T TIGR02470 99 EQLVNGH-PNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRI 177 (784)
T ss_pred HhhcCcc-cCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHHHHHhccCCceeeecCCC
Confidence 9999995 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++||+|++||||+||
T Consensus 178 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~r 257 (784)
T TIGR02470 178 QSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPSVLEAFLGRIPMVFN 257 (784)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+|||++|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++..+++|+++.+.+.+++
T Consensus 258 Ia~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~ 337 (784)
T TIGR02470 258 VVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTE 337 (784)
T ss_pred EEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCc-cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 321 HSNILRVPFKTDKG-ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 321 ~~~I~rvp~~~~~~-~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
+++|+|+|+++..+ .+++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|.++++++|+|+|+|+|+
T Consensus 338 ~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v~t~Hs 417 (784)
T TIGR02470 338 HAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHA 417 (784)
T ss_pred ceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEEEECCc
Confidence 99999999999877 79999999999999999999999998877778999999999999999999999999999999999
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
++++|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..||||++|++++|++++++
T Consensus 418 L~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~ 497 (784)
T TIGR02470 418 LEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDP 497 (784)
T ss_pred chhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
|++|||||+|.+.|+|++....+....++.+++++|++.+.++++|++.++++|+|+++||+++.||++.|++|+++++.
T Consensus 498 Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~ 577 (784)
T TIGR02470 498 KFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK 577 (784)
T ss_pred CeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh
Confidence 99999999999999999988888888899999999999999999999888999999999999999999999999999877
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
+.++++|+|+|++..+..+.|+++.+++++++++++++++.++|+|+|++.+.....++++++++++|+||+||++|+||
T Consensus 578 l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFG 657 (784)
T TIGR02470 578 LRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFG 657 (784)
T ss_pred hCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCC
Confidence 77789999999987767788888888999999999999999999999987666778899999987789999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||||+.||+.|+|.++.+|++++|+|++++|++|.+++++|..||+.|++|+++|++++.++|||+.+
T Consensus 658 LvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 720 a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
+++++++.++||||+++|+++|+|++||||
T Consensus 738 A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~ 767 (784)
T TIGR02470 738 SERLLTLAGIYGFWKFVSKLEREETRRYLE 767 (784)
T ss_pred HHHHHHHHhhhhHhhhccHHHHHHHHHHHH
Confidence 999999999999999999999999999996
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-162 Score=1308.61 Aligned_cols=515 Identities=62% Similarity=1.035 Sum_probs=446.4
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||+++|+++.++.+..+|+||++|++||||||.|||||||||||||+|||||||+++|+||+|||+|||+||
T Consensus 36 l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fK 115 (550)
T PF00862_consen 36 LLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFK 115 (550)
T ss_dssp EEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHH
Confidence 68999999999999887777788899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+ .++++++|||||+|||++||+|++||||||||+|||||||||||+|++++++||+|||.|+|+|++|||||||
T Consensus 116 E~LV~~-~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSsklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri 194 (550)
T PF00862_consen 116 ERLVDG-SANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRI 194 (550)
T ss_dssp HHHHHS-S-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT-
T ss_pred HHHcCC-ccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHhcCChHHHHHHHHHHHHhccCCeEeeecCCC
Confidence 999999 5789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|+||||++||+|++||||+++
T Consensus 195 ~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~ 274 (550)
T PF00862_consen 195 QSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFN 274 (550)
T ss_dssp -SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHHHHHHHHHHHHHS--HHHHHHHHHHS---SE
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
||++|+||||+|+||+|.||||||++||+|||||||++|..+++.+|.+|.|+|+|+|+.+|++.|++|+++++++.+++
T Consensus 275 vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~ 354 (550)
T PF00862_consen 275 VVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTE 354 (550)
T ss_dssp EEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETTES
T ss_pred EEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
|++|+|+||++.+|++++|+||+++|||+++|+.++.+++.++++++||+||+||+++|++|+++++++|+|+|+|+|++
T Consensus 355 ~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsL 434 (550)
T PF00862_consen 355 NARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSL 434 (550)
T ss_dssp SEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-
T ss_pred CcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
+++||+.++++|++++.+|||+||+++|.++|+.||+|||||+|+++|+++++|||++|.+||||++|++++||++|+||
T Consensus 435 ek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPk 514 (550)
T PF00862_consen 435 EKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPK 514 (550)
T ss_dssp HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSSBHTTGGGSSEEETTTEEEEES--TT-TT
T ss_pred ccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccccCCccchhhcchHhHHhhhccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYN 516 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 516 (749)
|+|||||+|.++|+|++++++|++.+|++||++||+
T Consensus 515 fNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 515 FNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp EEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred ccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 999999999999999999999999999999999985
|
4.1.13 from EC in the following reaction: |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-58 Score=547.35 Aligned_cols=456 Identities=26% Similarity=0.448 Sum_probs=354.2
Q ss_pred ceeEEEEEcccccCCCccc-CC-CCCcCcceehhHHHHHHHHHHHHHHHHHcC--CcccceEEEEeCCCCCC-CCCccCC
Q 036539 237 ILFNVVIFSPHGYFGQADV-LG-LPDTGGQVVYILDQVKALEEELLLRIKQQG--LYIKPQIVVVTRLIPDA-RGTKCNQ 311 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~-~g-~p~tGG~~vyvld~araL~~eLa~~L~~~G--~eV~~~i~V~T~~~p~~-~g~~~~~ 311 (749)
+-|+|++||+||+|..+++ +| .+|||||.+||. +||++|++.| |+|+ |+|+.+.+. .+..|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 3589999999999987765 88 599999999999 5666678888 7888 999997643 3455666
Q ss_pred ccccc------------cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHH-------c----CCCc
Q 036539 312 ELEPI------------EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEF-------L----GGKP 368 (749)
Q Consensus 312 ~~e~i------------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~-------l----~~~p 368 (749)
+.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. . ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 65443 24468999999999863 36788999999999999888876531 1 1249
Q ss_pred eEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccC----CCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 369 DLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYE----DSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 369 DIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
||||+|||+++.++.++++.+|+|+|+|.|++...|+. .+...+...+..|++..++.+|..++..||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999999877653 23345666777888899999999999999999999999
Q ss_pred HHhhcCCCCCccccccccccccchhh-----hccCCC---CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRV-----VKGIDV---LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYN 516 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v-----~~Gi~~---~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 516 (749)
+++ +||..|.+|. |.+|++ .+|++. +.+|+.|||||||++.|.|......+... ..++....
T Consensus 392 E~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~ 461 (1050)
T TIGR02468 392 EIE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAK 461 (1050)
T ss_pred HHH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---cccccccc
Confidence 998 3454444444 444433 334442 46799999999999999986432211000 00000000
Q ss_pred ccc--hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC--CeEEEEEeccCCCCCCcchhHHHHHHHHHH
Q 036539 517 KED--NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN--LVNLVIVGAFFDPSKSKDREETAEIKKMHA 592 (749)
Q Consensus 517 ~~~--~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~ 592 (749)
+.. .......+.++++|+|+++||+++.||++.|++|++++++..+ ++. +|+|+++. .+........+...+.+
T Consensus 462 ~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~ 539 (1050)
T TIGR02468 462 PDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLK 539 (1050)
T ss_pred ccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHH
Confidence 000 0001112236789999999999999999999999999975433 444 46677643 11111112234677889
Q ss_pred HHHHcCCCCcEEEecCccCcCChHHHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc
Q 036539 593 LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGV 668 (749)
Q Consensus 593 li~~~~L~~~V~flG~~~~~~~~~el~~~la~aa----dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~ 668 (749)
+++++++.++|.|+| .++.+++..+|+. + |+||+||.+|+||++++||||||+|||||+.||+.|+|.++.
T Consensus 540 li~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 540 LIDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 999999999999999 6778899999884 4 799999999999999999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+|++++|.|++++|++|.+ +++|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 615 nGlLVdP~D~eaLA~AL~~----LL~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLK----LVADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cEEEECCCCHHHHHHHHHH----HhhCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999999965 4589999999999999998 5799999999999998876
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-59 Score=510.92 Aligned_cols=486 Identities=38% Similarity=0.581 Sum_probs=427.5
Q ss_pred ecccccCCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhc
Q 036539 155 MINDNLNTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSS 234 (749)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (749)
|.||++++...+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccc
Q 036539 235 LPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELE 314 (749)
Q Consensus 235 ~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e 314 (749)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|.|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 565 8999999999999999999999999999999999999999999999988765 3455
Q ss_pred cccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEE
Q 036539 315 PIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQA 394 (749)
Q Consensus 315 ~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v 394 (749)
...+..+++|+++|++ ++.+|+ +.+||++..|+ .+...+.+.+++ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6666778999999984 445677 88899999998 677788888777 999999999999999999999999999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccccccccc-chhhhcc
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPG-LCRVVKG 473 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~-ly~v~~G 473 (749)
.+.|.++..+++..+.+|+.+...|+++++|.++...++.+| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999 9999999
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
+++|.++++++++|-|.+.+.+.-. .+++. + ++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~----------------i---~~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDS----------------I---PE---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcc----------------c---CC----------------------
Confidence 9999999999999999988776211 11000 0 00
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
...++.+++++|+.- .+++++|+.++.++|+++++++++.++++|.-. .....+.|++++++..++++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 122456777777321 457899999999999999999999766655532 4445677999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 634 LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 634 ~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
. |.||++.+|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|+++|++.
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~ 451 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEM 451 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999999999999999999 444 333344444678899999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 714 YTWKIYANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
|||+++.+++.++...|.+|+.++..++.+.+||++
T Consensus 452 fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (495)
T KOG0853|consen 452 FSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYIS 487 (495)
T ss_pred HhHHHHHHHHHHHhHhcCCcccccccccccccccHH
Confidence 999999999999999999999999999999998864
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-51 Score=463.33 Aligned_cols=426 Identities=29% Similarity=0.529 Sum_probs=314.2
Q ss_pred eEEEEEcccccCCCcc-cCC-CCCcCcceehhHHHHHHHHHHHHHHHHHcCC--cccceEEEEeCCCCCCC-CCccCCcc
Q 036539 239 FNVVIFSPHGYFGQAD-VLG-LPDTGGQVVYILDQVKALEEELLLRIKQQGL--YIKPQIVVVTRLIPDAR-GTKCNQEL 313 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~-~~g-~p~tGG~~vyvld~araL~~eLa~~L~~~G~--eV~~~i~V~T~~~p~~~-g~~~~~~~ 313 (749)
++|+++|+||+|+|.+ ++| .|+.||+++|+. +|+++|+++|| +|+ |+|+.++... +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999998 777 499999999999 77777899997 899 9998765421 12232223
Q ss_pred ccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE
Q 036539 314 EPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ 393 (749)
Q Consensus 314 e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~ 393 (749)
+.+ ..++.++|+|+... .|.++...++|+..+...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 24789999997643 23455667788777776666655432 34799999999888889999999999999
Q ss_pred EEEecCCcccccC---CCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhh
Q 036539 394 ATIAHALEKTKYE---DSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRV 470 (749)
Q Consensus 394 v~t~H~l~~~k~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v 470 (749)
|+|.|++...+.. .....+..+...|.+......++..++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432210 011111222223344444445778899999999999765441 1 111
Q ss_pred hccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHH
Q 036539 471 VKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGL 550 (749)
Q Consensus 471 ~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~L 550 (749)
..|++ ..|+.+||||+|.+.|.|........ .+.. ..+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~~~-------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EIDN-------LLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hHHH-------HHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 12344 67999999999999987753221100 0000 0011232 4567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc---C
Q 036539 551 TEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT---K 626 (749)
Q Consensus 551 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a---a 626 (749)
++|++++....+..+++ |+|+|++ ......+..++.+++.++++++++.++|+|+| .++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcC
Confidence 99998754332334554 5576654 11111222334566778899999999999999 67788999998842 2
Q ss_pred cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 036539 627 GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEG 706 (749)
Q Consensus 627 dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 706 (749)
|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.++ ++||+.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~l----l~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDA----LSDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999654 47999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 036539 707 LKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 707 ~~~v~~~ysw~~~a~~ll~ly 727 (749)
++++.++|||+.++++|+++.
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=407.51 Aligned_cols=427 Identities=18% Similarity=0.225 Sum_probs=289.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccC-Cccccc-
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCN-QELEPI- 316 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~-~~~e~i- 316 (749)
|||+|||.+.+|- ..+||...++. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998874 35899999999 77777899999999 999887543211000 000000
Q ss_pred --------cCccceEEEEecCccCCccccccccccccccch---HH---HHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 036539 317 --------EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYL---EG---FAQDATTMILEFLGGKPDLIIGNYSDGNLVA 382 (749)
Q Consensus 317 --------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl---~~---f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva 382 (749)
....++.+++++.... ..+..++.+. .+ |...+. ++...+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~-~~~~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAA-EFAEGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHH-HHHHhcCCCCceEEECCcHHHHHH
Confidence 0123567776664221 2223333332 22 333333 333444669999999999999998
Q ss_pred HHHHHcC-----CCcEEEEecCCcccc-cCC-----Ccchhhhc-CcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcC
Q 036539 383 SVMASKL-----GITQATIAHALEKTK-YED-----SDVKWKEL-DPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSK 450 (749)
Q Consensus 383 ~lla~~~-----gvp~v~t~H~l~~~k-~~~-----s~~~~~~~-~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~ 450 (749)
.++++.. ++|+|+|+|++.... ++. ..+.+..+ .....+...+...+.+++.||.|+|+|...++...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 799999999985321 100 00011100 01111111233345678999999999988776432
Q ss_pred CCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccc-hhhHHhhccccchhhhcCccCC
Q 036539 451 DRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFH-PEIEELLYNKEDNNEHIGYLAD 529 (749)
Q Consensus 451 ~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~-~~~~~~l~~~~~~~~~~g~l~~ 529 (749)
... + ++.+.+.+ .....|+.+||||+|.+.|.|.++..... .+. ..++.+.-+....++++|+. +
T Consensus 214 ~~~--~----~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TPE--F----GYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred ccc--C----CcChHHHH------HhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 210 0 00111000 11256899999999999998864321000 000 00011111122345667873 3
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
++.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ .++.+.+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~-- 343 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQI-- 343 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEE--
Confidence 4688999999999999999999999998753 799999998854 23567888888886 4566543
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG------VSGFHIDPYNGDESSD 683 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~lv~p~d~e~lA~ 683 (749)
..+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|++++++
T Consensus 344 --g~~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 344 --GYDEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred --eCCHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 223445667788 5999999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|.+++. +..+++.|.+|++++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 9988763 34578889999988863 689999999999999974
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=392.35 Aligned_cols=399 Identities=21% Similarity=0.278 Sum_probs=296.3
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 678899998753 355566799999999 77778899999999 999764322111 111123
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
++.+.+++..+..+ .....+..++..|.....+.+......+||+||+|++.+++++.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654321 1111111222233333443444433458999999998888888888888999999999987
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
...+ ..++..... .........+...++.+|.++++|....+... ...|.+ ..+
T Consensus 135 ~~~~----~~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~-------------------~~~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLV-------------------RHYDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHH-------------------HHcCCC--hhh
Confidence 4211 001100000 00011122355678999999999987655211 112333 678
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
+.+||||+|.+.|.+...... ++++++ ++++++|+|+||+.+.||++.|++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 134565 56788999999999999999999999999776
Q ss_pred CCC--eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 561 RNL--VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 561 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
.++ ++|+|+|++.. +. ..+.+.++++++++++.++|+|+| .++.+++..+|+. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~-----~g--~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSG-----SG--LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCC-----Cc--chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 99999997532 00 112567888899999999999999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999996654 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 036539 719 YANKMLNMGCM 729 (749)
Q Consensus 719 ~a~~ll~ly~~ 729 (749)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=405.46 Aligned_cols=460 Identities=16% Similarity=0.187 Sum_probs=311.8
Q ss_pred HHHhhcCCCcchHHHhhh--cC--CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 216 LSEVLQAPDPLHMEKFLS--SL--PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 216 ~~~~~~~p~~~~~~~~~~--~~--pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
-.++.+.+|...+..|+. +- .+.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345667788777777764 22 2459999999988764 47999998888 66777899999999
Q ss_pred ceEEEEeCCCCCCCCCccC-Cc-----cc-cccC-----------ccceEEEEecCccCCccccccccccccccc---hH
Q 036539 292 PQIVVVTRLIPDARGTKCN-QE-----LE-PIEG-----------TKHSNILRVPFKTDKGILHRWVSRFDVYPY---LE 350 (749)
Q Consensus 292 ~~i~V~T~~~p~~~g~~~~-~~-----~e-~i~~-----------~~~~~I~rvp~~~~~~~~~~~isr~~i~py---l~ 350 (749)
|+++.++........ .. .. .+.+ .+|+.++.+...... .+..|..++.+ .+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643200000 00 00 0101 012222222110000 01223333322 12
Q ss_pred H--HHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH------cCCCcEEEEecCCcccc-cCCCc-----chhhhcC
Q 036539 351 G--FAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS------KLGITQATIAHALEKTK-YEDSD-----VKWKELD 416 (749)
Q Consensus 351 ~--f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~------~~gvp~v~t~H~l~~~k-~~~s~-----~~~~~~~ 416 (749)
+ |...++-++....+.+|||||||.|..++++.++.+ ..++++|+|+|++.... ++... +.+..+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 2 222333344444467999999999999987655443 23578999999985332 11111 1111110
Q ss_pred --ccc--ccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCC
Q 036539 417 --PKY--HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSV 492 (749)
Q Consensus 417 --~~y--~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~ 492 (749)
... .+..++..-+.++..||.|+|+|+..+..+... + +..|.+. +.....|+.+|+||||.+.
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehhh
Confidence 000 011222223345667999999999888743321 1 1111111 1223679999999999999
Q ss_pred CCCCchHHhhhhccchhhHHhhccccchhhhcCccCC-CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEec
Q 036539 493 YFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLAD-RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGA 571 (749)
Q Consensus 493 f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~-~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~ 571 (749)
|.|.++..-...--...++.+.-+....++++|+..+ ++.|+|+++||+.+.||++.|++|+..+.+ ++++|+|+|+
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGd 816 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGS 816 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeC
Confidence 9987542100000001122233344556778898432 467999999999999999999999998864 4789999999
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc
Q 036539 572 FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651 (749)
Q Consensus 572 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP 651 (749)
|+.+ .+.+.+.++++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 817 Gp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 817 SPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 9751 23467888999999999999999 566666778999 599999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 652 TFATNQGGPAEIIVD---------GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 652 VVat~~GG~~EiI~d---------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++++||+.|+|.+ +.+||+|++.|+++++++|.+++..+..||+.|++|+++++ .++|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999875 57999999999999999999887766789999999998775 378999999999
Q ss_pred HHHHHHHh
Q 036539 723 MLNMGCMY 730 (749)
Q Consensus 723 ll~ly~~~ 730 (749)
|+++|+..
T Consensus 960 YeeLY~~l 967 (977)
T PLN02939 960 YEELYQRA 967 (977)
T ss_pred HHHHHHHH
Confidence 99998754
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=395.02 Aligned_cols=430 Identities=18% Similarity=0.223 Sum_probs=294.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC-----cc
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ-----EL 313 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~-----~~ 313 (749)
|||++||...+|- -.+||...++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998863 25899999999 67777899999999 9999876532110000 00
Q ss_pred c-cc-----------cCccceEEEEecCccCCccccccccc-ccccc--c---h---HHHHHHHHHHHHHHcCCCceEEE
Q 036539 314 E-PI-----------EGTKHSNILRVPFKTDKGILHRWVSR-FDVYP--Y---L---EGFAQDATTMILEFLGGKPDLII 372 (749)
Q Consensus 314 e-~i-----------~~~~~~~I~rvp~~~~~~~~~~~isr-~~i~p--y---l---~~f~~~~~~~l~~~l~~~pDIIh 372 (749)
. .+ ...+++.++++..... ..| ..++. + . ..|...+...+ ...+.+|||||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~-------~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~-~~~~~~~DiiH 133 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL-------FDRPGGIYGDDYPDNAERFAFFSRAAAELL-SGLGWQPDVVH 133 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH-------cCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HhcCCCCCEEE
Confidence 0 00 0112455555543210 111 01221 1 1 22333343333 33467999999
Q ss_pred EcCCCchHHHHHHHHcCC---CcEEEEecCCcccc-cCCCcch-----hhhcC-cccccchhhhHHHHHhhhCCEEEeCC
Q 036539 373 GNYSDGNLVASVMASKLG---ITQATIAHALEKTK-YEDSDVK-----WKELD-PKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 373 ~h~~~~~lva~lla~~~g---vp~v~t~H~l~~~k-~~~s~~~-----~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+|+|.+++++.++++..+ +|+|+|+|++.... ++..... +..+. ..+.+...+...+.++..||.|+|+|
T Consensus 134 ~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 134 AHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred ECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecC
Confidence 999999999998888776 99999999985322 1111110 01010 11111112334566889999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
...++.+... .+ ++.+.+.. .....++.+|+||+|.+.|.|..+..-...--....+....+....++
T Consensus 214 ~~~~~ei~~~--~~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 214 PTYAREILTP--EF----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQE 281 (473)
T ss_pred HhHHHHhcCC--cC----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHH
Confidence 8877643321 01 11111110 112568999999999999987543210000000000111112233456
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+++||+.+.||++.|++|+.++.+. +++|+|+|+|.. .+.+.+++++.+++ .+
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--Cc
Confidence 78884445889999999999999999999999999753 599999999853 23456777777664 67
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG------VSGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~lv~p~ 676 (749)
+.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.
T Consensus 348 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVII----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEE----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 88887 566777888999 5999999999999999999999999999999999999999998 899999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|+++++++|.+++....+|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 9999999998877555559999999999886 3689999999999999974
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=373.69 Aligned_cols=397 Identities=32% Similarity=0.517 Sum_probs=300.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+|++.|+.|.. -.|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... . ....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-----~--~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-----I--VELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-----c--cccc
Confidence 5889999987632 245689999999999 66777799999999 888654332111 0 1112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|++++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 35777777764321 1233445666666666666665543 23899999999888888888899999999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
+...........|. +........++..++.+|.++++|.......... .+.+ ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------cccc--cc
Confidence 75433221111111 1122233456678899999999998765521111 1111 45
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.+||||+|.+.|.+....... ++.++. +.++++|+|+||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888665432211 112333 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|++..... ..+...++++++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112344777888899999999999 7788999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.++ .+|++.+++|++++++++.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL----LTDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999999999999999999999999654 479999999999999999999999999
Q ss_pred HHHHH
Q 036539 720 ANKML 724 (749)
Q Consensus 720 a~~ll 724 (749)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=404.98 Aligned_cols=407 Identities=16% Similarity=0.119 Sum_probs=281.4
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc-CCcc-c
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC-NQEL-E 314 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~-~~~~-e 314 (749)
.+|||++||.+..|- ..+||...+|. .|+++|+++||+|. |+|+.++....... .... .
T Consensus 586 ~pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~ 646 (1036)
T PLN02316 586 PPMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQR 646 (1036)
T ss_pred CCcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEE
Confidence 359999999999864 35899999999 67777899999999 99998764210000 0000 0
Q ss_pred cc--cC---------ccceEEEEecCccCCccccccccccccccc---hH---HHHHHHHHHHHHHcCCCceEEEEcCCC
Q 036539 315 PI--EG---------TKHSNILRVPFKTDKGILHRWVSRFDVYPY---LE---GFAQDATTMILEFLGGKPDLIIGNYSD 377 (749)
Q Consensus 315 ~i--~~---------~~~~~I~rvp~~~~~~~~~~~isr~~i~py---l~---~f~~~~~~~l~~~l~~~pDIIh~h~~~ 377 (749)
.+ .+ .+++.++.+.... + +..+..++.| .. .|...++ ++......+|||||+|+|.
T Consensus 647 ~~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aal-e~l~~~~~~PDIIHaHDW~ 719 (1036)
T PLN02316 647 SYSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAAL-EFLLQSGFHPDIIHCHDWS 719 (1036)
T ss_pred EeccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHH-HHHHhcCCCCCEEEECCCh
Confidence 00 00 1133444333110 1 1122222221 12 2333333 3333446699999999999
Q ss_pred chHHHHHHHHc------CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCC
Q 036539 378 GNLVASVMASK------LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKD 451 (749)
Q Consensus 378 ~~lva~lla~~------~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~ 451 (749)
+++++.++++. .++|+|+|+|++.... . .-..++..||.|+|+|...+..+..
T Consensus 720 talva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n------~lk~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 720 SAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------N------HIGKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------h------HHHHHHHHCCEEEeCCHHHHHHHHh
Confidence 99998888764 3589999999863210 0 0124678999999999987663221
Q ss_pred CCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhcc-chhhHHhhccccchhhhcCccCCC
Q 036539 452 RPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKF-HPEIEELLYNKEDNNEHIGYLADR 530 (749)
Q Consensus 452 ~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~-~~~~~~~l~~~~~~~~~~g~l~~~ 530 (749)
. .++.....|+.+|+||||.+.|.|.++.......- ...++.+.......++.+|+. +.
T Consensus 779 ~-------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~ 838 (1036)
T PLN02316 779 N-------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QA 838 (1036)
T ss_pred c-------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-cc
Confidence 1 01222246999999999999998764321000000 000000111222345678883 24
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC--CCcEEEecC
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL--KGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L--~~~V~flG~ 608 (749)
+.|+|+++|||.++||++.|++|+.++.+ .+++|+|+|+|+++ .+.+.+.+++.++++ +++|.|.|
T Consensus 839 d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g- 906 (1036)
T PLN02316 839 DLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCL- 906 (1036)
T ss_pred cCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEe-
Confidence 68999999999999999999999999865 36999999999751 235678888998865 57899988
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECC
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG-------------VSGFHIDP 675 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg-------------~~G~lv~p 675 (749)
..+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||+|++
T Consensus 907 ---~~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 907 ---TYDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred ---cCCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 333333347888 5999999999999999999999999999999999999999884 68999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.|+++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 983 ~d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 983 ADAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CCHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999999998776422 3344556777777777899999999999999975
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=388.00 Aligned_cols=440 Identities=17% Similarity=0.171 Sum_probs=295.8
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCc--cCC--
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTK--CNQ-- 311 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~--~~~-- 311 (749)
|| |||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999988864 57999887777 66667899999999 9999875532110 000
Q ss_pred ccccc--cCccceEEEEec--CccCCc----cc--ccccccccccc-------c---hHHHH--HHHHHHHHHHcCCCce
Q 036539 312 ELEPI--EGTKHSNILRVP--FKTDKG----IL--HRWVSRFDVYP-------Y---LEGFA--QDATTMILEFLGGKPD 369 (749)
Q Consensus 312 ~~e~i--~~~~~~~I~rvp--~~~~~~----~~--~~~isr~~i~p-------y---l~~f~--~~~~~~l~~~l~~~pD 369 (749)
....+ .-.....+.++- ..+..+ ++ ..+..|..++. | .++|+ ..+..++......+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 00000 000011122110 000000 01 01122333321 1 12222 2223233344456899
Q ss_pred EEEEcCCCchHHHHHHHHcC-------CCcEEEEecCCcccccCCCc-----chhhhcCcccccchhhhHHHHHhhhCCE
Q 036539 370 LIIGNYSDGNLVASVMASKL-------GITQATIAHALEKTKYEDSD-----VKWKELDPKYHFSCQFIADTIAMNATDF 437 (749)
Q Consensus 370 IIh~h~~~~~lva~lla~~~-------gvp~v~t~H~l~~~k~~~s~-----~~~~~~~~~y~f~~~~~~e~~a~~~aD~ 437 (749)
|||+|+|.+++++.+++++. ++|+|+|+|++......... ..+........+...+...+.++..||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999998887654 79999999997532211000 0001000000111123345668899999
Q ss_pred EEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccc
Q 036539 438 IIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNK 517 (749)
Q Consensus 438 IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~ 517 (749)
|+|+|+..++.+.... . .++.+++..+ ....|+.+|+||||.+.|.|.++..-+..--...++.+.-++
T Consensus 224 VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENK 292 (489)
T ss_pred ceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHH
Confidence 9999998887543310 0 1112221111 115689999999999999886542111000001111122223
Q ss_pred cchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 518 EDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 518 ~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
...++.+|+..++++++|+++||+++.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.++++++++
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~ 360 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHHC
Confidence 344567888666788999999999999999999999999875 3799999999864 2456788888887
Q ss_pred CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEE
Q 036539 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD----GVSGFHI 673 (749)
Q Consensus 598 ~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d----g~~G~lv 673 (749)
+++|.|+| .++.+++..+|+ ++|+||+||.+|+||++.+|||+||+|+|+++.||..|++.+ +.+|+++
T Consensus 361 --~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 361 --PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred --CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 47899999 677888899999 599999999999999999999999999999999999998864 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 674 DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 674 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++.|+++++++|.++++ +..|++.|++++++++ .++|||+.++++|+++|+.
T Consensus 434 ~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 434 HDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 99999999999988763 5578999999988764 4789999999999999974
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=377.50 Aligned_cols=396 Identities=13% Similarity=0.087 Sum_probs=284.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCC--CCCC-CCccCCcccc
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLI--PDAR-GTKCNQELEP 315 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~--p~~~-g~~~~~~~e~ 315 (749)
|||+++|.+++| +.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~P---------~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAP---------ELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCCC---------CccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 799999988764 5689999998 77777899999999 999752 2210 0000100001
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQ 393 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~ 393 (749)
.....+++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1112468899988643210 00000 1111 122333444444443346899999998654 456777888899999
Q ss_pred EEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhcc
Q 036539 394 ATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKG 473 (749)
Q Consensus 394 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~G 473 (749)
++++|+....... .................++.+++.+|.||++|....+.. ...|
T Consensus 135 v~~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~--------------------~~~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAF----GLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA--------------------REKG 190 (412)
T ss_pred EEEeccCCHHHHH----HhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH--------------------HHcC
Confidence 9999976421110 000000000000011246678899999999998877621 1224
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 44 6789999999999888764321100 01234565 5677899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
+.++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999986 799999 7778999999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 634 LYEA----FGLTVIEAMNCGLPTFATNQGG--PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 634 ~~E~----fGLtvlEAMa~GlPVVat~~GG--~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|++++|++|.+ +.+|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA----LARQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHH
Confidence 9998 5778999999999999999887 458886 59999999999999999965 4589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++++|||+.++++|+++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999874
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=372.47 Aligned_cols=366 Identities=17% Similarity=0.197 Sum_probs=272.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++.++| ..||.+.++. +|++.|+++||+|+ |+|+..+...+. + ...
T Consensus 1 kI~~v~~~~~p---------~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFYP---------NLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeecccc---------ccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 69999977764 5699999999 77777899999999 999764332111 0 112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGN--LVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~--lva~lla~~~gvp~v~t~ 397 (749)
.++.+.++|...... .........+...+.+.+. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 356788887643210 0011111112222222222 348999999987653 346677888999999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+.... .+.. ... . .......++.+|.+|++|....+. .....+++
T Consensus 121 h~~~~~----~~~~-~~~---~-----~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~~~~-- 166 (398)
T cd03796 121 HSLFGF----ADAS-SIH---T-----NKLLRFSLADVDHVICVSHTSKEN-------------------TVLRASLD-- 166 (398)
T ss_pred cccccc----cchh-hHH---h-----hHHHHHhhccCCEEEEecHhHhhH-------------------HHHHhCCC--
Confidence 986311 1100 000 0 011234578899999999865441 01112343
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877654321 035678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+|+|+|+. .+.+.++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88788999999999876 567889999999999999999 7778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.++. ++++ +.|+++++++|.+++ +++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~-~~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLA-EPDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeec-CCCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 4444 448999999997655 566666678899999999999999
Q ss_pred HHHHHHHHHHHHh
Q 036539 718 IYANKMLNMGCMY 730 (749)
Q Consensus 718 ~~a~~ll~ly~~~ 730 (749)
.++++++++|+..
T Consensus 356 ~~~~~~~~~y~~l 368 (398)
T cd03796 356 DVAKRTEKVYDRI 368 (398)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999754
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=378.97 Aligned_cols=432 Identities=19% Similarity=0.170 Sum_probs=293.6
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC--ccc---
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ--ELE--- 314 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~--~~e--- 314 (749)
||++||+..+|- ..+||...++. .|+++|+++||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987763 36899999999 66777799999999 9998876532110000 000
Q ss_pred ------------cccCccceEEEEecCccCCccccccc--cccccccc-h---HHHHHHHHHHHHHHcCCCceEEEEcCC
Q 036539 315 ------------PIEGTKHSNILRVPFKTDKGILHRWV--SRFDVYPY-L---EGFAQDATTMILEFLGGKPDLIIGNYS 376 (749)
Q Consensus 315 ------------~i~~~~~~~I~rvp~~~~~~~~~~~i--sr~~i~py-l---~~f~~~~~~~l~~~l~~~pDIIh~h~~ 376 (749)
......++.+++++...... +..+ +....|.. . ..|...+...+ ..+..+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l-~~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELL-RRLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHH-HhcCCCCcEEEECch
Confidence 00011245566554322110 0000 00111111 1 12333344333 333679999999999
Q ss_pred CchHHHHHHHHc------CCCcEEEEecCCcccccCCCc------chh--hhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 377 DGNLVASVMASK------LGITQATIAHALEKTKYEDSD------VKW--KELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 377 ~~~lva~lla~~------~gvp~v~t~H~l~~~k~~~s~------~~~--~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
.+++++.++++. .++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 998888888776 389999999998543211000 001 000111223334556778899999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
...++.+....+ ++.+..+ +.....|+.+|+||+|.+.|.|.........-.....+....+....++
T Consensus 219 ~~~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 887764332210 0000000 1112579999999999999987654321100000011112223334456
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+|+||+.+.||++.|++++.++.+. +++|+|+|+|.. ...+.+.++++++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 78875457899999999999999999999999998764 499999999854 2345677777765 567
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGV------SGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~------~G~lv~p~ 676 (749)
+.+++ ..+.+++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|+++++.
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88776 455666778888 59999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|+++++++|.++++ +..+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999988763 44679999999988865 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=375.81 Aligned_cols=437 Identities=17% Similarity=0.177 Sum_probs=284.1
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCc--ccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQE--LEP 315 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~--~e~ 315 (749)
.|||++||....|- -.|||..-++- .|.++|+++||+|. |+++.+..-... .... ...
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 48999999888764 47999887777 66777899999999 999987543110 1100 000
Q ss_pred ccC--ccceEEEEecCccCCc-cc--cccccccc-cc------c---chHHH--HHHHHHHHHHHc--CCCceEEEEcCC
Q 036539 316 IEG--TKHSNILRVPFKTDKG-IL--HRWVSRFD-VY------P---YLEGF--AQDATTMILEFL--GGKPDLIIGNYS 376 (749)
Q Consensus 316 i~~--~~~~~I~rvp~~~~~~-~~--~~~isr~~-i~------p---yl~~f--~~~~~~~l~~~l--~~~pDIIh~h~~ 376 (749)
+.. ...+++.......-.- ++ ..+..|.. ++ + ..++| ...++-++...+ +.+|||||+|.|
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 100 0011121111000000 00 01112221 11 1 11232 223333444332 468999999999
Q ss_pred CchHHHHHHHH--cCCCcEEEEecCCcccc-cCCC-----cchhhhcC-cccccchhhhHHHHHhhhCCEEEeCCHHHHh
Q 036539 377 DGNLVASVMAS--KLGITQATIAHALEKTK-YEDS-----DVKWKELD-PKYHFSCQFIADTIAMNATDFIIASTFQEIA 447 (749)
Q Consensus 377 ~~~lva~lla~--~~gvp~v~t~H~l~~~k-~~~s-----~~~~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~ 447 (749)
.+++++.++.. ..++|.|+|+|++.... ++.. ...+..+. ....+.......+.++..||.|+|+|...++
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99888877764 34689999999985322 1100 01111110 0011111112345678999999999988776
Q ss_pred hcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCcc
Q 036539 448 GSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYL 527 (749)
Q Consensus 448 ~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l 527 (749)
...+.. .++.+.+.+ .....|+.+|+||||.+.|.|.++.......-...++.+..+....++++|+.
T Consensus 223 ei~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 223 EIQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLD 290 (485)
T ss_pred HHhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCC
Confidence 432210 001111100 11256899999999999998865421000000000111111223345678884
Q ss_pred CCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE-EEe
Q 036539 528 ADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM-RWI 606 (749)
Q Consensus 528 ~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V-~fl 606 (749)
.+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|.. ...+.+++++++++ +++ .|+
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEEe
Confidence 44568899999999999999999999999875 3689999999864 23466777787764 455 788
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFHIDPYN 677 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~lv~p~d 677 (749)
|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|.|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 84 45888887435999999999999999999999999999999999999999875 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+++++++|.+++ .+.+|++.|++|+++++ .++|||+.++++|+++|+..
T Consensus 431 ~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 431 ADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHH
Confidence 999999998754 35589999999999986 37899999999999998754
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=363.34 Aligned_cols=281 Identities=18% Similarity=0.229 Sum_probs=231.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMAS--KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~--~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+.+||+||+|++..+..+..+++ ..+.+.++|.|+..... ......+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 45899999999887777777665 44557788999753211 00001111 11233678999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.. ...|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l--------------------~~~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRL--------------------QKMGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHH--------------------HHcCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 8766511 112444 67899999999998886532110
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+.++..|+|+||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988778999999999976 6789999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~ 676 (749)
|.|+| .++.+++..+|+. +|++|+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 7788999999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKV-DPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|++++|++|.++ .+ ||+.+++|+++|++++.++|||+.+++++.++|+.
T Consensus 356 d~~~la~ai~~l----~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAF----SQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999654 47 99999999999999999999999999999999864
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=350.55 Aligned_cols=366 Identities=19% Similarity=0.264 Sum_probs=266.1
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+... . ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~-------~---~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRL-------D---EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcch-------h---hh
Confidence 68999962 34599999999 77777899999999 8886532210 0 01
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc----CCCcEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASK----LGITQA 394 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~----~gvp~v 394 (749)
..+..+..++.... +......+.......+.+.+. +.+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY--------PLFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc--------chhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322111 001111111122222333332 348999999987654444333322 389999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccC
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGI 474 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi 474 (749)
++.|+...... .....+. ...+..++.+|.|+++|....+...+. +
T Consensus 116 ~~~h~~~~~~~--------~~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLV--------GQDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCccccc--------cccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 99997532110 0011111 123557889999999998766521110 1
Q ss_pred CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHH
Q 036539 475 DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWY 554 (749)
Q Consensus 475 ~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 554 (749)
....++.+||||+|...|.+...... ++.++. ++++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 12568999999999887765433221 123454 56778999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
..+.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4689999999977 56788888999999999999943 268899995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +.+||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALS----LLEDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999965 44799999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 036539 715 TWKIYANKMLNMGCM 729 (749)
Q Consensus 715 sw~~~a~~ll~ly~~ 729 (749)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=367.93 Aligned_cols=375 Identities=18% Similarity=0.204 Sum_probs=264.4
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
-++|||++++ +..|- +..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~~-------~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSPF-------SYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcCC-------cccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999996 43321 45799999998 67777899999999 888653211 01
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQA 394 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v 394 (749)
. .++.+++++.... ++ ..... +.+ .+...+.+.+. +.+|||||+|.+.. ...+.++++..++|++
T Consensus 107 ~---~g~~v~~~~~~~~-~~----~~~~~-~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PF----YQKVP-LSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-cc----CCCce-eec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1234443322111 00 00000 000 01112223333 24899999998654 3455567788899999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccC
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGI 474 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi 474 (749)
++.|+......+... +..... ......+...+.+|.|+++|....+... ..|.
T Consensus 173 ~~~h~~~~~~~~~~~--~~~~~~-----~~~~~~r~~~~~ad~ii~~S~~~~~~l~--------------------~~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYT--FSWLVK-----PMWDIIRFLHRAADLTLVTSPALGKELE--------------------AAGV 225 (465)
T ss_pred EEEecCchhhhhccc--chhhHH-----HHHHHHHHHHhhCCEEEECCHHHHHHHH--------------------HcCC
Confidence 999976322111111 110000 0012245567889999999987766211 1121
Q ss_pred CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHH
Q 036539 475 DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWY 554 (749)
Q Consensus 475 ~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 554 (749)
. ...++.+||||+|.+.|.|....... +..+.. ..+++++|+|+||+.+.||++.|++++
T Consensus 226 ~-~~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 T-AANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred C-CcCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 1 15689999999999988775332211 011211 134678999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
+++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|++|+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 4799999999876 4566666653 3699999 7778899999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD---GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d---g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.++ ++|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~l----l~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETL----LADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 9999999999999999999654 479999999999999998
Q ss_pred HhCCHHHHHHHHHH-HHHHh
Q 036539 712 ECYTWKIYANKMLN-MGCMY 730 (749)
Q Consensus 712 ~~ysw~~~a~~ll~-ly~~~ 730 (749)
++|||+.+++++++ .|+..
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HhCCHHHHHHHHHHHHHHHH
Confidence 68999999999998 57654
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=354.74 Aligned_cols=379 Identities=22% Similarity=0.269 Sum_probs=271.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++..++|. ..||.++++. +|++.|+++ |+|+ |+|..... ..
T Consensus 1 mkI~~i~~~~~p~--------~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~~ 46 (388)
T TIGR02149 1 MKVTVLTREYPPN--------VYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------FD 46 (388)
T ss_pred CeeEEEecccCcc--------ccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------hc
Confidence 7999998766531 2499999999 666666666 7777 66643111 01
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
..++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|++++.|
T Consensus 47 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h 114 (388)
T TIGR02149 47 SEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAH 114 (388)
T ss_pred CCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEee
Confidence 124566666532210 011111222222211 11113479999999988777777777778999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
++..... .........+.+. ...++..++.+|.||++|....+...+. ..|++ .
T Consensus 115 ~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~ad~vi~~S~~~~~~~~~~------------------~~~~~--~ 168 (388)
T TIGR02149 115 SLEPLRP----WKEEQLGGGYKLS--SWAEKTAIEAADRVIAVSGGMREDILKY------------------YPDLD--P 168 (388)
T ss_pred ccccccc----ccccccccchhHH--HHHHHHHHhhCCEEEEccHHHHHHHHHH------------------cCCCC--c
Confidence 8743210 0000111112111 1245678899999999998766522111 01333 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.|...... ++++|+ ++++++|+|+||+.+.||++.|++|+.++.
T Consensus 169 ~~i~vi~ng~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 227 (388)
T TIGR02149 169 EKVHVIYNGIDTKEYKPDDGNVV-------------------LDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYIP 227 (388)
T ss_pred ceEEEecCCCChhhcCCCchHHH-------------------HHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHHh
Confidence 68999999999988876533221 234565 667889999999999999999999999885
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC-CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL-KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L-~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
++++++++|+++. ..+..+.+++.+.+++. .++|.|++. .++.+++..+++. +|++|+||.+|+
T Consensus 228 ---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 228 ---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred ---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 3689999988765 11224556666777665 345787651 6778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG------DESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~------e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+ +.+||+.+++|++++++++.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINI----LLADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 788888854 55899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 036539 712 ECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 712 ~~ysw~~~a~~ll~ly~~ 729 (749)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999874
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=348.35 Aligned_cols=375 Identities=15% Similarity=0.212 Sum_probs=272.3
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
|+-||+|++.--+|-|. ...||+++++. +++++|+. +|+ |+|...+.-. ..+..
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~~~ 54 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYTKV 54 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chhhc
Confidence 77899998877776542 24699999999 66666643 899 9998755310 11111
Q ss_pred cCccceEEEEecCccCCc-cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 317 EGTKHSNILRVPFKTDKG-ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
.+|+.+.++++....+ ...+|.+. .- ..|.......+......++||||+|... .+...+..+..+.+.+.
T Consensus 55 --~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 55 --NDNCDIHYIGFSRIYKRLFQKWTRL-DP----LPYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred --cCCCceEEEEeccccchhhhhhhcc-Cc----hhHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 1245666666543211 11122221 11 2333334333333324579999999755 34444555556789999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|.... ...+..++.||++|....+. + ..+.+
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~-------~--------------~~~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKF-------Y--------------EERLP 159 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHH-------H--------------HhhCC
Confidence 9995411 01245679999999776651 1 11122
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|.+.|.+...... ++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNL-------------------RQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHH-------------------HHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 568999999999988876433211 133555 556789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
++.+..|+++|+|+|++... ...+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11223345567777777765 5799999 7778899999994 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 636 -EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGF-HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 636 -E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~-lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|++++|++|.+ +++|++. .+|+++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~----ll~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR----TLADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH----HHcCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 5688999999999955 4588885 78999999999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 036539 714 YTWKIYANKMLNMGCMY 730 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~ 730 (749)
|||+.++++++++|+.|
T Consensus 362 fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998764
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=343.38 Aligned_cols=366 Identities=16% Similarity=0.184 Sum_probs=248.1
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHH---
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQ--- 354 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~--- 354 (749)
+||++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987732210 11 57888887553311 123334333322
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhh-hcCcc----cccch
Q 036539 355 ---DATTMILE--FLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWK-ELDPK----YHFSC 423 (749)
Q Consensus 355 ---~~~~~l~~--~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~-~~~~~----y~f~~ 423 (749)
.+.+.+.. ..+.+|||||+|...+ .+..+++. .++|++...|.+..... ++.... ..... .+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEG--ADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCC--CCCCCCCCCCCchhHHHHHHH
Confidence 22222222 1245899999997554 22334444 35888876654322111 110000 00000 00000
Q ss_pred hhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhh
Q 036539 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRL 503 (749)
Q Consensus 424 ~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl 503 (749)
........++.+|.+|++|....+... ..+..|+.|||||+|.+.|.|........
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~ 201 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRL 201 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhcc
Confidence 111134578999999999987765211 11146899999999999988764432211
Q ss_pred hccchhhHHhhccccchhhhcCccCCCCCcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchh
Q 036539 504 TKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDRE 582 (749)
Q Consensus 504 ~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~e 582 (749)
. ...++ .+++++|+|+|| +.+.||++.|++|++++.+..++++|+|+|++..........
T Consensus 202 ~-----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~ 262 (396)
T cd03818 202 P-----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPD 262 (396)
T ss_pred c-----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCC
Confidence 1 11122 456789999998 999999999999999998888999999999853200000000
Q ss_pred HHHHHHHHHH-HHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 583 ETAEIKKMHA-LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 583 e~~~~~~l~~-li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
...+.+.+.+ +..+++ .++|.|+| .++.+++..+|+ ++|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~-~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQ-VSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHH-hCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0011222222 222222 47899999 778899999999 4999999999999999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|++.++.+|++++++|++++|++|.+ +++||+.+.+|+++|++++.++|||+.+++++++
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIE----LLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999999999999999999965 4489999999999999999889999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=340.42 Aligned_cols=365 Identities=17% Similarity=0.186 Sum_probs=261.0
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++..+. +.||.+.++. .|++.|.++|+++. |++....+. .. .... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~~----~~---~~~~-~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVSA----FR---KRIQ-R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCCh----hH---HHHH-h
Confidence 677775443 3599999999 66667788899987 776321111 11 1111 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE-EEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ-ATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~-v~t~H 398 (749)
.++.+++++.... . . ..+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~----------~-~----~~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG----------K-D----VAVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC----------C-C----hHHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2456666653321 0 0 1122233444444 3899999997544 33445566677774 34445
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... ....| .+. ...+.....+|.+|++|....+...+ ..|++ .
T Consensus 113 ~~~~~~~--~~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~-------------------~~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDL--DGSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRG-------------------PVKVP--P 159 (374)
T ss_pred Ccccccc--hhhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHH-------------------hcCCC--h
Confidence 3211100 00011 011 12334456789999999876652111 11333 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+......... +.... +.++++|+++||+++.||++.|++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999988876532211100 00111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 559 RLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 559 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
+..+ +++|+++|+|+. .+.+++.++++++..++.|+|.+ +++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788899999999999999943 378899994 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++ .+|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l----~~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPY----VSDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999654 4799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 036539 715 TWKIYANKMLNMGCM 729 (749)
Q Consensus 715 sw~~~a~~ll~ly~~ 729 (749)
||+.++++++++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999974
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=329.34 Aligned_cols=363 Identities=17% Similarity=0.226 Sum_probs=280.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
++|+|+|+|+|| .+||++.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 579999999995 5799999999 99999999999998 999998887654322
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchH--HHHHHHHcCCCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNL--VASVMASKLGITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~l--va~lla~~~gvp~v~t 396 (749)
+.+..++.+|+... .+....|.+...+.-+...++ +++..|||+|.+.+.+ -+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 22477787776532 122222222211111122223 3489999999988743 4667788999999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
-|++ |...++.-....... .+.+...|.+||+|+...+.+. +...++
T Consensus 121 dHSl----fGfad~~si~~n~ll---------~~sL~~id~~IcVshtskentv-------------------lr~~L~- 167 (426)
T KOG1111|consen 121 DHSL----FGFADIGSILTNKLL---------PLSLANIDRIICVSHTSKENTV-------------------LRGALA- 167 (426)
T ss_pred cccc----ccccchhhhhhccee---------eeeecCCCcEEEEeecCCCceE-------------------EEeccC-
Confidence 9997 333333222222221 1256789999999976554211 111234
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..|+.+|||.++...|.|...... +.+...|..++||-.+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999654310 2344789999999999999999999999
Q ss_pred hHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCC
Q 036539 557 NKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYE 636 (749)
Q Consensus 557 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E 636 (749)
+.+++|+++|+|+|+||. ...+++..+++.+.++|.++| .++.+++.+.|.+ .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 677888999999999999999 8889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
+||++++|||+||+|||+|++||.+|++.++ -......+++++++++.+++.++...|.. -.+++.+-|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~~-------~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPLE-------FHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCchh-------HHHHHHHhccH
Confidence 9999999999999999999999999999764 23344557999999999999888777543 34567788999
Q ss_pred HHHHHHHHHHHH
Q 036539 717 KIYANKMLNMGC 728 (749)
Q Consensus 717 ~~~a~~ll~ly~ 728 (749)
+.++++.+++|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=341.35 Aligned_cols=386 Identities=18% Similarity=0.237 Sum_probs=261.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+++.+... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999976543 589999999 67777899999999 998642211 000 011111
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMIL--EFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~--~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
++.+...+.....++ ..+. ..+..+.......+. .....++|+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGRF---HILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHhH---HHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 0000 011112111111111 112468999999875543322 223334889999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|..... . .....+. ...++. .....++..++.+|.|+++|....+...+. .....
T Consensus 122 ~h~~~~~-~-~~~~~~~--~~~~~~-~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~------------------~~~~~- 177 (392)
T cd03805 122 CHFPDQL-L-AQRGSLL--KRLYRK-PFDWLEEFTTGMADKIVVNSNFTASVFKKT------------------FPSLA- 177 (392)
T ss_pred EecChHH-h-cCCCcHH--HHHHHH-HHHHHHHHHhhCceEEEEcChhHHHHHHHH------------------hcccc-
Confidence 9943211 0 0000000 001110 011246678899999999997765521111 01111
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+|+||+|.+.|.+....... +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664332100 11122 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEEC
Q 036539 557 NKRLR---NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQP 632 (749)
Q Consensus 557 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~P 632 (749)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98765 78999999998651 22334556788999999 99999999999 7778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 036539 633 ALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712 (749)
Q Consensus 633 S~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 712 (749)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+ +.++++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~----l~~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLK----LANDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 89999999965 447999999999999999999
Q ss_pred hCCHHHHHHHH
Q 036539 713 CYTWKIYANKM 723 (749)
Q Consensus 713 ~ysw~~~a~~l 723 (749)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998864
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=334.20 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=229.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||+|+...+..+..++++.|+|++++.|+........ +..... + ......+...++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~~-~--~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRSR-W--ALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhcccc-h--hHHHHHHHHHHHhcCEEEECCHHH
Confidence 489999999877777778888999999999999754322111 000000 1 111123455678999999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+.. ...|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~--------------------~~~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRL--------------------LALGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHH--------------------HHcCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 6521 112444 678999999999887754311
Q ss_pred ccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 526 YLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 526 ~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
..++++++++|++.+.||++.+++|+..+.+..++++|+|+|+++. .++++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998865 5678888999999999999
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e 679 (749)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 7778999999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++++|.++ .+|++.+++|+.++++++.++|||+.+++++.+
T Consensus 325 ~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 325 ALAAALGRL----LADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999999654 489999999999999999999999999999876
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=326.40 Aligned_cols=361 Identities=17% Similarity=0.168 Sum_probs=254.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999999987 45799999999 77777899999999 88875322210 1112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.++.+.++|.....+ . .........+...+. .+.++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------L---GTIIYDILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------h---hhhHHHHHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 356777777543111 0 000000011111111 134566666655544 33344455669999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
..... ..|..... . .....++..++.+|.||++|....+... ...|.+
T Consensus 118 ~~~~~-----~~~~~~~~--~--~~~~~~~~~~~~ad~ii~~s~~~~~~~~-------------------~~~~~~---- 165 (363)
T cd04955 118 LEWKR-----AKWGRPAK--R--YLKFGEKLAVKFADRLIADSPGIKEYLK-------------------EKYGRD---- 165 (363)
T ss_pred cceee-----cccccchh--H--HHHHHHHHHHhhccEEEeCCHHHHHHHH-------------------HhcCCC----
Confidence 64321 11211110 0 1123456678899999999987766211 111222
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
+ .+||||+|...+.+..... +..+. .+++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~~---------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEIL---------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhhH---------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 7999999987765411110 11332 334578899999999999999999998864
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH-HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC-CC
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME-KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY-EA 637 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~-E~ 637 (749)
+++|+|+|+++. ...+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 7778899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|. ++.+|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~----~l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLE----ELEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHH----HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999976 7999988775 888885 455899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=354.95 Aligned_cols=291 Identities=12% Similarity=0.166 Sum_probs=220.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEE-EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQAT-IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~-t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+|||||+|.+..+.++.++++..++|+++ +.|++..... .. .|+. .| ......+....++.+|++|..
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~--~~-~~~~---~~----~~l~~~l~~~~~~i~Vs~S~~ 468 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDR--PD-RYRV---EY----DIIYSELLKMRGVALSSNSQF 468 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccc--hh-HHHH---HH----HHHHHHHHhcCCeEEEeCcHH
Confidence 489999999999888888888889999865 5676522111 00 1100 01 011111222234566666655
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+. +....|++ ..|+.|||||||...|.+......... .+
T Consensus 469 ~~~~-------------------l~~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~------------------~~ 509 (694)
T PRK15179 469 AAHR-------------------YADWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMA------------------QF 509 (694)
T ss_pred HHHH-------------------HHHHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHH------------------hh
Confidence 4431 11112444 679999999999887765332211100 01
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
....+.+.++|+++||+++.||++.|++|+.++.+..++++|+|+|+|+. .+.++++++++++.++|.
T Consensus 510 ~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~ 577 (694)
T PRK15179 510 DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERIL 577 (694)
T ss_pred ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEE
Confidence 11113456789999999999999999999999988889999999999977 678999999999999999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG--DESS 682 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~--e~lA 682 (749)
|+|++. ++..+|+ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++
T Consensus 578 flG~~~------dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La 650 (694)
T PRK15179 578 FTGLSR------RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVA 650 (694)
T ss_pred EcCCcc------hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHH
Confidence 999543 6888888 599999999999999999999999999999999999999999999999998874 6899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 651 ~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 651 EALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99987775444454 5678899999899999999999999995
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=338.76 Aligned_cols=392 Identities=14% Similarity=0.092 Sum_probs=267.6
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCc----
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKG---- 334 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~---- 334 (749)
-..||.++.+..+|-++.....+.=+-.|+.|..+|-++++......|.++--..-.-.+.+...+-+++-..+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 4569999999977776554433333446788888888999997666554332111111333344555555221111
Q ss_pred --cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE-EecCCcccccCCCcch
Q 036539 335 --ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT-IAHALEKTKYEDSDVK 411 (749)
Q Consensus 335 --~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~-t~H~l~~~k~~~s~~~ 411 (749)
.++.+++ ..|-...+.......+.+ ..+|||||+|...+++.+.++++..|+|+++ +.|+... ..
T Consensus 251 ~~~~~~~~~---~~~~~~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~----~~--- 318 (578)
T PRK15490 251 SPELRLLLS---HLPPVCKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPP----VV--- 318 (578)
T ss_pred chHHHHHHh---cCChHHHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCC----cc---
Confidence 0011000 011111122222222232 3499999999988888888888889999864 4665211 00
Q ss_pred hhhcCcccccchhhhHHHHHhhhCCE------EEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEec
Q 036539 412 WKELDPKYHFSCQFIADTIAMNATDF------IIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAA 485 (749)
Q Consensus 412 ~~~~~~~y~f~~~~~~e~~a~~~aD~------IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIp 485 (749)
... ....+...+..++. +++.|....+. +....|++ ..|+.|||
T Consensus 319 ~~r---------~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~-------------------l~~~lgip--~~KI~VIy 368 (578)
T PRK15490 319 RKR---------LFKPEYEPLYQALAVVPGVDFMSNNHCVTRH-------------------YADWLKLE--AKHFQVVY 368 (578)
T ss_pred hhh---------HHHHHHHHhhhhceeEecchhhhccHHHHHH-------------------HHHHhCCC--HHHEEEEe
Confidence 000 00011112233333 33444333220 11112444 77999999
Q ss_pred CCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeE
Q 036539 486 PGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVN 565 (749)
Q Consensus 486 nGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~ 565 (749)
||+|.+.|.|........+. ....++ +++.++|+++||+.+.||...+++++.++.+..++++
T Consensus 369 NGVD~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdir 431 (578)
T PRK15490 369 NGVLPPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATR 431 (578)
T ss_pred CCcchhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeE
Confidence 99999988775432111000 001222 3456799999999999999999999999887778999
Q ss_pred EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHH
Q 036539 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645 (749)
Q Consensus 566 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEA 645 (749)
|+|+|+|+. .++++++++++++.++|.|+|+ .+++..+|+. +|+||+||.+|+||++++||
T Consensus 432 LvIVGdG~~------------~eeLk~la~elgL~d~V~FlG~------~~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEA 492 (578)
T PRK15490 432 FVLVGDGDL------------RAEAQKRAEQLGILERILFVGA------SRDVGYWLQK-MNVFILFSRYEGLPNVLIEA 492 (578)
T ss_pred EEEEeCchh------------HHHHHHHHHHcCCCCcEEECCC------hhhHHHHHHh-CCEEEEcccccCccHHHHHH
Confidence 999999976 6789999999999999999994 3478889994 99999999999999999999
Q ss_pred HHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 646 MNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 646 Ma~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|+||+|||+|+.||..|+|.++.+|++++++|++++++++..+ ..+..+...+..|+++|++++.++|||+.++++|++
T Consensus 493 MA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~k 571 (578)
T PRK15490 493 QMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVK 571 (578)
T ss_pred HHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877432 334455556678999999999999999999999999
Q ss_pred HHHH
Q 036539 726 MGCM 729 (749)
Q Consensus 726 ly~~ 729 (749)
+|..
T Consensus 572 i~~~ 575 (578)
T PRK15490 572 TIAS 575 (578)
T ss_pred HHHh
Confidence 9864
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=328.77 Aligned_cols=287 Identities=20% Similarity=0.196 Sum_probs=213.4
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
..+|||||+|++....+. .+.+..++|++.+.|+..... ....| . ..+..++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~-----------~--~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVW-----------D--FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHH-----------H--HHHHHHHhCCEEeecHHH
Confidence 458999999987753332 223334899999999742110 00111 1 113356789998888844
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCC--CCchHHhhhhccchhhHHhhccccchhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYF--PYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 322 1222 3455 999999975322 22111110 1123
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
.+|+ ++++++|+++||+++.||++.|++|++.+.+..++++|+|+|+|+. .+++. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~----~~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGAT----DDPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCC----CCchh---HHHHHHHHHHhCCCCC
Confidence 4666 6788999999999999999999999999987778999999999965 11111 2234455556677889
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS 682 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA 682 (749)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 26789999999 59999999999999999999999999999999999999999999999987 467788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.+|.+ ++.|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 329 ~~i~~----ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILY----LLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHH----HHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 88854 55899999999999999998999999999999999864
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=322.16 Aligned_cols=347 Identities=19% Similarity=0.227 Sum_probs=258.3
Q ss_pred CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccc
Q 036539 260 DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRW 339 (749)
Q Consensus 260 ~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~ 339 (749)
+.||.++++. +|+++|+++||+|. +++...+.. ...+ ..++.+++++......
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AELE----AEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHHH----hcCCeEEEccccccch-----
Confidence 3599999999 77777899999998 887542111 1111 1234556665443211
Q ss_pred ccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCccc
Q 036539 340 VSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419 (749)
Q Consensus 340 isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y 419 (749)
+..+ .+...+.+.+. +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 61 ------~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 1111 12222233333 34899999998877777777888889999999997632110
Q ss_pred ccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchH
Q 036539 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEK 499 (749)
Q Consensus 420 ~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~ 499 (749)
.....+..+|.++++|....+... ...|++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~-------------------~~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIR-------------------ENYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHH-------------------HhcCCC--hhhEEEecCCccccccCccccc
Confidence 112346789999999987665211 112343 6789999999999888654322
Q ss_pred HhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCc
Q 036539 500 QRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSK 579 (749)
Q Consensus 500 ~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 579 (749)
..... ..++.++. ++++++|+++||+++.||++.+++++.++.+..++++|+|+|+++.
T Consensus 169 ~~~~~--------------~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERIL--------------ALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHH--------------HHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 11100 01233444 5677899999999999999999999999988778899999999865
Q ss_pred chhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 036539 580 DREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFATNQG 658 (749)
Q Consensus 580 d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS-~~E~fGLtvlEAMa~GlPVVat~~G 658 (749)
+....+.+.+.+.++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11234556677888899899999994 4489999995 99999999 7999999999999999999999999
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 659 GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 659 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
|..|++.++.+|++++++|+++++++|...+ ..+++.+.+++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999996443 368999999999999999999999863
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=315.29 Aligned_cols=372 Identities=20% Similarity=0.204 Sum_probs=261.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6889987765 45799999999 77777889999999 887653221100 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
+........... ....... ..+.... .........+||+||+|.... ...+...+++.++|++.+.
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~---~~~~~~~-~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINVA-------YGLNLAR---YLFPPSL-LAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccchh-------hhhhhhh---hccChhH-HHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 0000000 0000011 111222245899999997433 4555666777899999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+....... ....+. +....+..+....+.++.++++|....... ..+. .
T Consensus 120 ~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~---------------------~~~~--~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEI---------------------RRLG--L 169 (375)
T ss_pred ccccccccc-ccchhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHH---------------------HhhC--C
Confidence 986332110 000011 111112234556788999999986655411 1111 2
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.+||||+|.+.+.+......+ +.++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6689999999999888664432211 22333 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+++|.+.. .+...+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22345556678899999999999 7778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.+ .+|++++. +.++++++|.+ +.+|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRR----ALELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 55999999955 55899999999999999999999999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=311.68 Aligned_cols=272 Identities=22% Similarity=0.273 Sum_probs=224.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||+|+... ..++.+.++..++|++.+.|+..... .... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR--SPDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc--cCch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 45555555566899999999653211 0000 123456889999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+..... .|.. ..++.++|||+|.+.+.+....
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCcccc------------------------
Confidence 877622111 1333 6789999999998877544300
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
...+++.|+++||+.+.||++.+++++.++.+..++++|+++|.++. .+.+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 03456789999999999999999999999988778999999999977 56788889999999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d 677 (749)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+++.|+..|++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 7778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
+++++++|.+++ +|++.+.+|+++|++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999996654 799999999999999999999999998763
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=309.96 Aligned_cols=333 Identities=17% Similarity=0.163 Sum_probs=238.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++........ ..
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 799999987665 23367899999999 67777789999999 88865322100 00
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
......+.. ................+. .+.+ ..+|||||+|.+..... +++..++|++++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAE-RALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHH-HHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 000000000 000000000111111222 2222 45899999998887554 56778999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... .+ ........+.++++|...... + .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------~-----------------~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------W-----------------PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------c-----------------cc--c
Confidence 7632110 00 122456778888888766541 0 01 1
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+. +.+++.|+|+||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877541 2345689999999999999999999865
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC-CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ-LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YE 636 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E 636 (749)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 7778899999995 999999998 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999996543 332 35678888899999
Q ss_pred HHHHHHHHHHHH
Q 036539 717 KIYANKMLNMGC 728 (749)
Q Consensus 717 ~~~a~~ll~ly~ 728 (749)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=311.07 Aligned_cols=354 Identities=20% Similarity=0.204 Sum_probs=255.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++........ ....
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DEER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hhhc---
Confidence 6899986665 45699999999 77777899999999 88765322211 1111
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.+..+.+++.... ....+... .....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 1234455443211 00111111 1111111 2255899999998765333333333468899999996
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
..... ... +.+.. ..+...++.+|.|+++|......... +..+..
T Consensus 116 ~~~~~----~~~-------~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KLL-------LKLYR--PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----chh-------hhhhh--HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 42111 000 01111 12345788999999999876541110 111146
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.+||||+|.+.+.+...... ..... +.++++|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 8899999999988765433211 00111 456789999999999999999999999986
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCC
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEA 637 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~ 637 (749)
+++|+|+|+|+. ...+.+.+++.++..+|.|+| .++.+++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 699999999876 567888888899999999999 7778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVD-GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~d-g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.++ .+|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRL----LEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999886 8999999999999999999654 489999999999999999999999
Q ss_pred HHHH
Q 036539 717 KIYA 720 (749)
Q Consensus 717 ~~~a 720 (749)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=308.06 Aligned_cols=387 Identities=18% Similarity=0.199 Sum_probs=272.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++|.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999977764 3488999999 67777889999999 8886533221110000 001122
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
.++.+.+++...... ..++.+ +..+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|++.++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777766543211 000000 0111 1233333333331 256899999997432 4555666677799999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+............... ...+. .....++..++.+|.++++|....+... ..+++
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYR--LLRKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHH--HHHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98743221111000000 00001 1112355678899999999988776211 12333
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.++|||+|...+.+......+ ..... +.++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877655432211 11121 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+. ++++|+|+|++.. .+.+.+.+...++ ++|.++| .++.+++..+|+. +|++++||..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 5566666666665 6799999 7778999999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 036539 638 F-----GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712 (749)
Q Consensus 638 f-----GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 712 (749)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.++ ..|++.+++|++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~----~~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILEL----LDDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHH----HhChHHHHHHHHHHHHHHHH
Confidence 5 88899999999999999999999999998999999999999999999654 48999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 036539 713 CYTWKIYANKML 724 (749)
Q Consensus 713 ~ysw~~~a~~ll 724 (749)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=307.34 Aligned_cols=363 Identities=20% Similarity=0.272 Sum_probs=259.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.... |..||.+.++. .|+++|+++||+|+ ++|......... . .
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~---~----- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--P---A----- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--C---C-----
Confidence 6899986665 34589999999 77777899999999 888763322110 0 0
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
....+...+...... . +..+ .......+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~-----~~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLAL-----PPRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eecc-----cchhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111100 0 0000 01111222222 34899999986654 46667778889999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+......... .... ...+ .....+...+.+|.+++.|....+. + .... .
T Consensus 116 ~~~~~~~~~~---~~~~--~~~~--~~~~~~~~~~~~d~i~~~s~~~~~~-------~---------------~~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY---GLGP--LSWL--AWAYLRWFHNRADRVLVPSPSLADE-------L---------------RARG--F 164 (364)
T ss_pred cChHHHhhhc---ccch--HhHh--hHHHHHHHHHhCCEEEeCCHHHHHH-------H---------------hccC--C
Confidence 7532110000 0000 0000 0122344678899999999876551 0 0111 4
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+++||+|.+.|.+........ +.++ +.++++|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5789999999998887654322111 1222 345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
.. ++++|+|+|+++. .+.++ +...+|.|+| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 76 8899999999876 22332 4567899999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
|++++|||+||+|||+++.|+..|++.++.+|+++++.|.++++++|.+ +..||+.+++|++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA----LLADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 9999999999999999999999999999999999999999999999965 4489999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 036539 719 YANKMLNMGC 728 (749)
Q Consensus 719 ~a~~ll~ly~ 728 (749)
++++++++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=334.85 Aligned_cols=295 Identities=16% Similarity=0.222 Sum_probs=232.7
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccC--CCcchhhhc-CcccccchhhhHHHHHhhhCCEEEe
Q 036539 365 GGKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYE--DSDVKWKEL-DPKYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 365 ~~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~--~s~~~~~~~-~~~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
..++||||+|... .++++.+++++.|+|++.|.|+....... .....|... ............++.+++.||.|++
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~ 250 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITT 250 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEe
Confidence 3578999999754 46778888899999999999986321100 000001000 0000000011235667899999999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
+|....+ +....|++ ..|+.|||||+|.+.|.+....
T Consensus 251 ~s~~~~~--------------------~~~~~g~~--~~ki~vIpNgid~~~f~~~~~~--------------------- 287 (475)
T cd03813 251 LYEGNRE--------------------RQIEDGAD--PEKIRVIPNGIDPERFAPARRA--------------------- 287 (475)
T ss_pred cCHHHHH--------------------HHHHcCCC--HHHeEEeCCCcCHHHcCCcccc---------------------
Confidence 9987654 11223444 6799999999999888664321
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+ .+.++++|+++||+.+.||++.+++|+..+.+..++++|+|+|+++. +..+.++++++++++++.
T Consensus 288 ----~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 288 ----R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGLE 353 (475)
T ss_pred ----c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCCC
Confidence 0 03567899999999999999999999999988889999999999853 124567888999999999
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEEC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD------GVSGFHID 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d------g~~G~lv~ 674 (749)
++|+|+| ..++..+|+ ++|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++++
T Consensus 354 ~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 236788888 499999999999999999999999999999999999999988 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+.|+++++++|.+ +++|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~----ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILR----LLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999965 4589999999999999999999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=307.35 Aligned_cols=281 Identities=18% Similarity=0.247 Sum_probs=218.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|....+.++.+++.. .++|++.+.|+..... .. .. .........++.++++|..
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~------~~-----~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RL------RM-----LAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HH------HH-----HHHHHHhhccCceEEEcHH
Confidence 48999999988776666665554 3678899999763210 00 00 1112233456777777766
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+... ...+++ ..++.+||||+|...|.+....... .++.+
T Consensus 141 ~~~~~~-------------------~~~~~~--~~~~~~i~ng~~~~~~~~~~~~~~~-----------------~~~~~ 182 (360)
T cd04951 141 ALDYFI-------------------ASKAFN--ANKSFVVYNGIDTDRFRKDPARRLK-----------------IRNAL 182 (360)
T ss_pred HHHHHH-------------------hccCCC--cccEEEEccccchhhcCcchHHHHH-----------------HHHHc
Confidence 554111 111223 5689999999998887654432221 12345
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|.
T Consensus 183 ~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 248 (360)
T cd04951 183 GV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVK 248 (360)
T ss_pred Cc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEE
Confidence 55 5678899999999999999999999999988778999999999987 567888888899989999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
|+|.+ +++..+|+. +|++++||..|+||++++|||+||+|||+++.|+..|++.+ +|+.++++|+++++++
T Consensus 249 ~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~ 319 (360)
T cd04951 249 LLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANK 319 (360)
T ss_pred Eeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHH
Confidence 99943 368888985 99999999999999999999999999999999999999977 8999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|.++++ .+++.++.++++ ++.+.++|||+.++++++++|+
T Consensus 320 i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 320 IDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 976542 577777778777 8888899999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=301.18 Aligned_cols=374 Identities=23% Similarity=0.306 Sum_probs=271.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++...| ..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 68999876653 3589999999 67777888999999 888764332111000 00
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.......... ..........+....... .. ..+||+||++.+.........++..++|++.+.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRL-LR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHH-hh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 000000111122222222 22 34899999999887655557778889999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
......... ...........+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 744321111 000011112335567889999999998776622111 1111 35
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1100 01111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|++.. .+.+.+.+++.+...+|.++| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997755 667778888889999999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+ +..|++.+.++++++++.+.++|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILR----LLDDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999999999999999999999998999999999999999999965 4589999999999999999999999999
Q ss_pred HHHHHHHHH
Q 036539 720 ANKMLNMGC 728 (749)
Q Consensus 720 a~~ll~ly~ 728 (749)
++++.++|+
T Consensus 366 ~~~~~~~~~ 374 (374)
T cd03801 366 AARTEEVYY 374 (374)
T ss_pred HHHHHHhhC
Confidence 999999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=304.23 Aligned_cols=363 Identities=18% Similarity=0.196 Sum_probs=264.2
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++-.. .||.+.++. .|++.|++.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765443 389999999 77777888999998 7775422211 11111 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H 398 (749)
.++.+..++.... +.. ..+...+.+.+. +.+||+||++.......+.+.++. .+.+.+.+.|
T Consensus 50 ~~i~v~~~~~~~~-------------~~~-~~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG-------------RPD-PGALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc-------------ccc-HHHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2455555543321 011 112222333333 348999999987776666666665 6889999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
....... .|. .. ..........+.+|.++++|....+.. ...|++ .
T Consensus 113 ~~~~~~~-----~~~--~~-----~~~~~~~~~~~~~~~~i~~s~~~~~~~--------------------~~~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TR-----LVARLRRLLSSFIPLIVANSAAAAEYH--------------------QAIGYP--P 158 (365)
T ss_pred CCccccc-----chh--Hh-----HHHHHHHHhccccCeEEeccHHHHHHH--------------------HHcCCC--h
Confidence 8643211 011 00 011223445677899899998766511 111343 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.++|||+|...+.+........ ++.+++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 7899999999988776554322211 133555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH-HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME-KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
+..++++|+|+|.+.. ......... ++++.++|.|+|.+ +++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444454 78888999999932 368889985 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+++.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999996544 799999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=304.22 Aligned_cols=358 Identities=17% Similarity=0.179 Sum_probs=250.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++|++.. |..||.+.++. .|+++|+++||+|+ +++........... ...
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~-------~~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYG-------GEQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCC-------Ccc
Confidence 689998643 34699999999 77777899999998 77654322110000 000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHHH---HHHHcCCCcE
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG---NLVAS---VMASKLGITQ 393 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~---~lva~---lla~~~gvp~ 393 (749)
...... .. .. ......+.+.+. ..+||+||++.+.+ ...+. ...+..++|+
T Consensus 52 ~~~~~~-~~--------------~~-----~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI-VL--------------DN-----PLDYRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee-ec--------------CC-----chhHHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 00 00 001111222222 34899999887432 12222 2223589999
Q ss_pred EEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhcc
Q 036539 394 ATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKG 473 (749)
Q Consensus 394 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~G 473 (749)
+.+.|+... . .. . ..........++.+|.|+++|...... + +
T Consensus 109 i~~~h~~~~-~---~~-~----------~~~~~~~~~~~~~~d~ii~~s~~~~~~-------~-----------~----- 150 (366)
T cd03822 109 VVTLHTVLL-H---EP-R----------PGDRALLRLLLRRADAVIVMSSELLRA-------L-----------L----- 150 (366)
T ss_pred EEEEecCCc-c---cc-c----------hhhhHHHHHHHhcCCEEEEeeHHHHHH-------H-----------H-----
Confidence 999998610 0 00 0 001122345678999999997333320 1 0
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
......++.+||||+|...+.+..... ..+. +.++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146899999999987665432211 0111 4567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
+.++.+..++++|+|+|++.... ........++++++++.++|.|+|. .++.+++..+|+. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~-------~~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL-------ERYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch-------hhhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 99998888899999999986510 0000111145788899999999982 2778999999995 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 634 LYE--AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 634 ~~E--~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+ +.+|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~----l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRR----LLADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 777778889999999999999999965 45899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 036539 712 ECYTWKIYANKMLNMGC 728 (749)
Q Consensus 712 ~~ysw~~~a~~ll~ly~ 728 (749)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 5 999999999999874
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=315.47 Aligned_cols=268 Identities=20% Similarity=0.252 Sum_probs=203.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCc--EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGIT--QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+.+||+||+|.+.....+.++++..+.| ++.+.|...... ..+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~--------------~~~------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK--------------KHA------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc--------------chh------hhhhhhcCCEEEEcC
Confidence 3489999999876666667777766655 444555321100 000 011237899999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.. ..+|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~--------------------~~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQM--------------------MARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHH--------------------HHcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 8766511 123554 668999999999654421110
Q ss_pred hcCccCCCCCcEEEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 523 HIGYLADRKKPIIFSMARLD--VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
...++++|+++||+. +.||++.+++++.++.. +++|+|+|+|+. .+.++++++++++.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~---~~~l~ivG~g~~------------~~~l~~~~~~~~l~ 235 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG---EWQLHIIGDGSD------------FEKCKAYSRELGIE 235 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC---CeEEEEEeCCcc------------HHHHHHHHHHcCCC
Confidence 023467899999996 46999999999998743 799999999987 67789999999999
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~lv~p~d~e 679 (749)
++|.|+|++.+ +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+ .||+.|+|.++.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999996542 34788888885 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|++|.+++ +|++.+ +.++......+|+-+.+.+++.++|.
T Consensus 313 ~la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999996544 787654 22333334477888888888888775
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=303.06 Aligned_cols=370 Identities=21% Similarity=0.279 Sum_probs=263.0
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++...+ |..||...++. .++++|+++||+|+ ++|...+..... ....
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEE------EEVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCcc------cccc--
Confidence 6889986654 56799999998 77778899999999 888764332111 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
.....+.+... ..+.... ..+...+ ..... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 52 -~~~~~~~~~~~--------~~~~~~~---~~~~~~~-~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFK--------YPDFRLP---LPIPRAL-IIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccch--------hhhhhcc---ccHHHHH-HHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 11111111110 0001000 0111111 12122 35899999997654 45667778889999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhh-hHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQF-IADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~-~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
+......... ............ ..++..++.+|.+++.|....+... ..+.
T Consensus 117 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~--------------------~~~~--- 168 (374)
T cd03817 117 TMYEDYTHYV-----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR--------------------EYGV--- 168 (374)
T ss_pred CCHHHHHHHH-----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH--------------------hcCC---
Confidence 8643110000 000000000011 2455678899999999987655111 1122
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.++|||+|...+.+......+ +.++. +.++++|+++||+.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665432211 22333 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++||..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999876 567888888999999999999 7778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
+|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+ +.++++.+++|++++++.+.+ ++
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~-~~-- 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLR----LLQDPELRRRLSKNAEESAEK-FS-- 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHH----HHhChHHHHHHHHHHHHHHHH-HH--
Confidence 99999999999999999999999999999999999998887 88888854 558999999999999999854 44
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++.++|+
T Consensus 363 -~~~~~~~~~~ 372 (374)
T cd03817 363 -FAKKVEKLYE 372 (374)
T ss_pred -HHHHHHHHHh
Confidence 6666766665
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=309.61 Aligned_cols=346 Identities=15% Similarity=0.184 Sum_probs=246.6
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ..... . ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~---~-~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDE---I-EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHH---H-HH
Confidence 578887543 2599999999 66666778999999 887653221 00111 1 11
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE-EEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ-ATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~-v~t~H 398 (749)
.++.+++++.... . ...+...+.+.+. ..+||+||+|......++.++++..+.|. +...|
T Consensus 51 ~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------N----PLKYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------c----HHHHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455665543321 1 1122222222222 35899999999877666667777777775 45677
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
........ .+.. .. ....+....+.+|.++++|....+.... . +. .
T Consensus 113 ~~~~~~~~----~~~~----~~---~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~-~~--~ 158 (358)
T cd03812 113 NTSDSHDK----KKKI----LK---YKVLRKLINRLATDYLACSEEAGKWLFG--------------------K-VK--N 158 (358)
T ss_pred cccccccc----cchh----hH---HHHHHHHHHhcCCEEEEcCHHHHHHHHh--------------------C-CC--c
Confidence 65322110 0000 00 0123455678899999999876652110 0 12 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+....... ++..+. ..++++|+|+||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 789999999999887654332211 112233 567889999999999999999999999999
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999976 5678888889999999999994 3478889995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
|++++|||+||+|||+|+.||..|++.+ ..|++..+++++++|++|.+ +.+||+.++.++..+.....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~----l~~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILK----LKSEDRRERSSESIKKKGLD 347 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHH----HHhCcchhhhhhhhhhccch
Confidence 9999999999999999999999999988 46777777788999999965 55899999988888776653
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=314.99 Aligned_cols=372 Identities=14% Similarity=0.121 Sum_probs=242.0
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcC-CcccceEEEEeCCCCCCCCC-------c
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQG-LYIKPQIVVVTRLIPDARGT-------K 308 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G-~eV~~~i~V~T~~~p~~~g~-------~ 308 (749)
+.|||+|++.-+. |..+|+.+.++ .++.+|+++| |+|+ |+++..+..... +
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3599999997776 56799999999 7777899999 7999 998876532110 0
Q ss_pred cCCcc--c-cccCccceEEEEecCccCCcccccccc--ccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 036539 309 CNQEL--E-PIEGTKHSNILRVPFKTDKGILHRWVS--RFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLV- 381 (749)
Q Consensus 309 ~~~~~--e-~i~~~~~~~I~rvp~~~~~~~~~~~is--r~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lv- 381 (749)
..... + .+....+.++.++|..+... .+..++ +..+++ ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 00000 0 01111123455555332110 000000 011111 1233333333 4899999998875 554
Q ss_pred -HHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccc
Q 036539 382 -ASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHT 460 (749)
Q Consensus 382 -a~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~ 460 (749)
+...++++++ ++.+.|+-.. .|. . +++. .....+............++|.+++.|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~--~-~~~~-g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~--------l---- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYV--K-REKN-GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD--------Y---- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHH--H-Hhcc-chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH--------H----
Confidence 5666667766 8889998321 110 0 0000 00000001111111222458999999964332 0
Q ss_pred ccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCC--CcEEEEE
Q 036539 461 AFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRK--KPIIFSM 538 (749)
Q Consensus 461 ~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~--k~vIl~v 538 (749)
.....+.++|||.+.|.|....... ..+ ..+ .+.++|+
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l~v 234 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAYYI 234 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEEEE
Confidence 1122334589999988766432111 011 122 3579999
Q ss_pred ecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHH
Q 036539 539 ARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGEL 618 (749)
Q Consensus 539 GRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el 618 (749)
|||.+.||++.|++|+.++.+..++++|+|+|+|++ .++++++++++++..++ |.| ....+
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~-- 295 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHAD-- 295 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHH--
Confidence 999999999999999999987778899999999998 78899999999886544 777 33333
Q ss_pred HHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHH
Q 036539 619 YRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTY 698 (749)
Q Consensus 619 ~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~ 698 (749)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 -~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~-- 365 (462)
T PLN02846 296 -PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP-- 365 (462)
T ss_pred -HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc--
Confidence 4555 58999999999999999999999999999999998 59999999999985 89999999976552 233
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 699 WNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 699 ~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
..++.+++ ++|||+.++++++++|+.-
T Consensus 366 -~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 22333332 5899999999999999865
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=313.26 Aligned_cols=391 Identities=12% Similarity=0.054 Sum_probs=255.1
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
|...||++++.-. +|.+..+. +++++|+++||+|+ |++...+.. .+.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 4457888887422 35566667 67778899999999 888653221 111
Q ss_pred ccCccceEEEEecCcc-CCccccccccccccccchHHHHH---HHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHc
Q 036539 316 IEGTKHSNILRVPFKT-DKGILHRWVSRFDVYPYLEGFAQ---DATTMILEFLGGKPDLIIGNYSDG---NLVASVMASK 388 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~-~~~~~~~~isr~~i~pyl~~f~~---~~~~~l~~~l~~~pDIIh~h~~~~---~lva~lla~~ 388 (749)
.....++.+.+++... ..+. ......+...... .+...+.. ..+||+||+|.+.. ..++.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1112357777776553 1100 0011111111111 11111222 35899999987553 3456666777
Q ss_pred CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccch
Q 036539 389 LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLC 468 (749)
Q Consensus 389 ~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly 468 (749)
.++|+|++.|+....... ........... .....++...+.+|.||++|....+...
T Consensus 120 ~~~~~V~~~h~~~~~~~~---~~~~~~~~~~~--~~~~~e~~~~~~ad~ii~vS~~~~~~l~------------------ 176 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA---LKLGENHPLVR--LAKWYEKLFGRLADYNLCVTKAMKEDLQ------------------ 176 (415)
T ss_pred hCCeEEEEcCCchHHHHh---cccCCCCHHHH--HHHHHHHHHhhcCCEeeecCHHHHHHHH------------------
Confidence 899999999986321110 00000000011 1112466778899999999988766211
Q ss_pred hhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcccc-chhhhcCccCCCCCcEEEEEecccCCCCH
Q 036539 469 RVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKE-DNNEHIGYLADRKKPIIFSMARLDVVKNL 547 (749)
Q Consensus 469 ~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~-~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl 547 (749)
..|++ ..|+.|||||. ...|.|........... . ...-+.+. ......+. .+++..+++++||+.+.||+
T Consensus 177 --~~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 177 --QFNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDEDF 247 (415)
T ss_pred --hhhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h--cccccccccccccccee-cCCCceEEEEeccccCCCCH
Confidence 12343 78999999994 45666654322110000 0 00000000 00001122 12345678889999999999
Q ss_pred HHHHHHHHHhHc------cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHH
Q 036539 548 TGLTEWYGKNKR------LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRC 621 (749)
Q Consensus 548 ~~LieA~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ 621 (749)
+.|++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| +++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 999999999864 246899999999987 678999999999965444446 6778999999
Q ss_pred HHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC---
Q 036539 622 IADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVD--- 695 (749)
Q Consensus 622 la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~d--- 695 (749)
|+ ++|++|+|+. .|+||++++|||+||+|||+|+.||..|+|+++.+|++++ |++++|++|..+ ++|
T Consensus 312 l~-~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~l----l~~~~~ 384 (415)
T cd03816 312 LA-SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDL----LSNFPN 384 (415)
T ss_pred HH-hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHH----HhcCCC
Confidence 99 5999997533 5789999999999999999999999999999999999994 899999999654 467
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 696 PTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 696 p~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
|+.+++|+++|+++. .++|+...++.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999987 678877665544
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=303.88 Aligned_cols=343 Identities=19% Similarity=0.224 Sum_probs=245.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++... ..||.+.++. .+++.|+++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66777899999999 7774411
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC--CCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL--GITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~--gvp~v~t 396 (749)
. +.+.+. ..+|||||+|++..+.+......+. ++|.+++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 000111 2389999999866544443333444 9999999
Q ss_pred ecCCccccc----CCCcchhh-h-----cCcccc---cchhhh-HHHHHh-hhCCEEEeCCHHHHhhcCCCCCccccccc
Q 036539 397 AHALEKTKY----EDSDVKWK-E-----LDPKYH---FSCQFI-ADTIAM-NATDFIIASTFQEIAGSKDRPGQYESHTA 461 (749)
Q Consensus 397 ~H~l~~~k~----~~s~~~~~-~-----~~~~y~---f~~~~~-~e~~a~-~~aD~IIt~S~~~~~~~~~~~~qye~~~~ 461 (749)
+|+...... ......|. . ....+. +..... .....+ ..++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 998643211 00000000 0 000000 111111 111112 45677888886554411110
Q ss_pred cccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc
Q 036539 462 FTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL 541 (749)
Q Consensus 462 ~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL 541 (749)
..++ ..++.++|||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 0122 5789999999999988765433211 23454 5566778777777
Q ss_pred cC--CCCHHHHHHHHHHhHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCC-hHH
Q 036539 542 DV--VKNLTGLTEWYGKNKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR-NGE 617 (749)
Q Consensus 542 ~~--~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~-~~e 617 (749)
.. .||++.+++++..+.+. .++++++++|++.. ... .++..+|.|+| +++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998764 57899999999865 111 14567899999 555 778
Q ss_pred HHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 036539 618 LYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 618 l~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 697 (749)
+..+|+. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ +|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 9999994 9999999999999999999999999999999999999999999999999999999999996544 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 698 YWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 698 ~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.+.+|++++++.+.++|||+.++++|+++|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=292.64 Aligned_cols=356 Identities=20% Similarity=0.261 Sum_probs=256.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57788754 278888888 67777888999999 8886532211 0111
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-cCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS-KLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H 398 (749)
.++.+..+|..... .+ .+..+ .....+.+.+. +.+||+||+|...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~-~~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDL-KALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHH-HHHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654310 00 11111 11112222222 35899999998777777777766 45566777888
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+........ ... . ......++..++.+|.+++.|....+...+ ..+.+ ..
T Consensus 113 ~~~~~~~~~-~~~-------~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-------------------~~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLK-------R--RLYLLLERLALRFTDKVIFQNEDDRDLALK-------------------LGIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhH-------H--HHHHHHHHHHHhhccEEEEcCHHHHHHHHH-------------------hcCCC-cC
Confidence 763322110 000 0 001123456778899999999877662111 11111 13
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+++||+|.+.+.+.... .+.++++|+++||+.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 577788999998776543211 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHH-HHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHA-LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
+..++++|+|+|.+.. ...... .+.+.+...+|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDE------------ENPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCc------------chhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 7778999999999976 111112 3667778889999994 4478899995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.+|..|++.++.+|++++++|+++++++|.+ +..|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER----LIEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999999999999999999965 45899999999999999999999999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=300.28 Aligned_cols=364 Identities=20% Similarity=0.203 Sum_probs=255.2
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++......... ......
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~-----~~~~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLL-----LPLRAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCcccccc-----ccchhc-
Confidence 578887666531 4699999999 77777899999998 777653222110 000000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
... ... ......+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 55 --~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL---LLR---------LPRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc---ccc---------cccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 000 0001111111111111111111 35899999998776443 6679999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
+.....+...... .........+..++.+|.++++|...++...+ ..+++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-------------------~~~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLR-------------------YLGVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH-------------------HhCcC--HH
Confidence 7443322111110 00111123456789999999999877662111 11222 56
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.++|||+|...+.+..... + ..... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-V-------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-H-------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654322 1 00111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|.+... .....+.+++.++.++|.|+| .++.+++..+++. +|++++||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 122223336678889999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||++|+|||+|+.|+..|++. .+|+++++.|+++++++|.+ +++|++.+.++++++++.+ ++|||+.+
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIER----LLEDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 47999999999999999965 4589999999999999665 88999999
Q ss_pred HHHHH
Q 036539 720 ANKML 724 (749)
Q Consensus 720 a~~ll 724 (749)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=293.81 Aligned_cols=356 Identities=18% Similarity=0.174 Sum_probs=245.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++++..| ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68999866654 24699999999 66667788999999 8876532221110 0 0
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
.+..+...+.... ..............+...........+.+ ..+||+||+|.+.. +......++..++|++.+.|
T Consensus 52 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h 128 (359)
T cd03823 52 IGVVVYGRPIDEV-LRSALPRDLFHLSDYDNPAVVAEFARLLE--DFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLH 128 (359)
T ss_pred ccceeeccccccc-cCCCchhhhhHHHhccCHHHHHHHHHHHH--HcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEe
Confidence 0111111110000 00000000000010111111122222233 34899999998754 33344456678999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... +. .......|.++++|....+... ..+.. .
T Consensus 129 d~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~--------------------~~~~~--~ 165 (359)
T cd03823 129 DYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYV--------------------ANGLF--A 165 (359)
T ss_pred eeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHH--------------------HcCCC--c
Confidence 7532110 00 0112233999999987665211 11222 4
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.+++++.++.
T Consensus 166 ~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 217 (359)
T cd03823 166 EKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKRLP 217 (359)
T ss_pred cceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHHHH
Confidence 68999999999887654321 01 456788999999999999999999999987
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E~ 637 (749)
+ ++++|+++|.+.. ........ +...+|.++| .++.+++..+++. +|++++||. .|+
T Consensus 218 ~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e~ 275 (359)
T cd03823 218 R--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWPEN 275 (359)
T ss_pred h--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcccCC
Confidence 6 6899999999876 11111111 5668999999 7778999999995 999999998 799
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++... +
T Consensus 276 ~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~----~ 347 (359)
T cd03823 276 FPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI----E 347 (359)
T ss_pred CChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH----H
Confidence 9999999999999999999999999999999999999999999999996544 7999999999999877633 9
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 348 ~~~~~~~~~~~ 358 (359)
T cd03823 348 DQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHhh
Confidence 99999999885
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=290.60 Aligned_cols=345 Identities=16% Similarity=0.203 Sum_probs=249.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++...+ .||.+.++. +|++.|+++||+|+ +++...... ..... .
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-------~~~~~--~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP-------PFYEL--D 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC-------Ccccc--C
Confidence 68888866542 589999998 67777888999999 888654320 00011 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCC-CcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLG-ITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~g-vp~v~t~H 398 (749)
.++.+..++..... ..+.+ ..+...+.+.+. ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDS----------KLLAR-FKKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeeccccccc----------chhcc-ccchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 13444444432210 00000 011112222222 35999999998772 2222223344 48999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... ... .....++..++.+|.+++.|...... ..+. ..
T Consensus 114 ~~~~~~~--~~~------------~~~~~~~~~~~~~d~ii~~s~~~~~~----------------------~~~~--~~ 155 (348)
T cd03820 114 NSPDAYK--KRL------------RRLLLRRLLYRRADAVVVLTEEDRAL----------------------YYKK--FN 155 (348)
T ss_pred CCccchh--hhh------------HHHHHHHHHHhcCCEEEEeCHHHHHH----------------------hhcc--CC
Confidence 7532110 000 00012456789999999999776410 0011 25
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.++|||++...+.+. .+.+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998765432 0345779999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
+..++++|+|+|++.. ...+.++++++++..+|.+.|. .+++..+|+. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8788999999999877 5667778899999999999993 4689999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 639 GLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.++ ++||+.+++|++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRL----MEDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999875 567778777799999999999999999654 489999999999997665 889999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.+++++.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=308.76 Aligned_cols=395 Identities=15% Similarity=0.183 Sum_probs=256.6
Q ss_pred hcCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCc
Q 036539 233 SSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQE 312 (749)
Q Consensus 233 ~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~ 312 (749)
+|....++|+++.|+.. ..||.++.+.+.|++| .++|+++. |.|+|...... . .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~-~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDAS-P---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCC-H---HHH
Confidence 34445678999866553 2369999999666654 66788544 44788652211 1 111
Q ss_pred cccccCccceEE------EEecCccCCccccccccccccccch---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 036539 313 LEPIEGTKHSNI------LRVPFKTDKGILHRWVSRFDVYPYL---EGFAQDATTMILEFLGGKPDLIIGNYSDGNLVAS 383 (749)
Q Consensus 313 ~e~i~~~~~~~I------~rvp~~~~~~~~~~~isr~~i~pyl---~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~ 383 (749)
+......-++.+ +++. .++|++ ...|+.+ .+....+...+.......||+++-....+..+
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~-- 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTY-- 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------cccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHH--
Confidence 111111112221 1111 134554 3345542 22222222222222123676555333322111
Q ss_pred HHHHcCCCcEEEEecCCcccc------------cCCC----cchhhhcCcccccchhhh-HHHHHhhhCCEEEeCCHHHH
Q 036539 384 VMASKLGITQATIAHALEKTK------------YEDS----DVKWKELDPKYHFSCQFI-ADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 384 lla~~~gvp~v~t~H~l~~~k------------~~~s----~~~~~~~~~~y~f~~~~~-~e~~a~~~aD~IIt~S~~~~ 446 (749)
.+++..++|+++.+|-..... |..+ ...|....+.+ |...+. .+....+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~-Y~~~~~~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKIL-YYRAFAWMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHH-HHHHHHHHHHHHcCCCCEEEECCHHHH
Confidence 223455899999999432110 0000 00000000000 111111 34556788999999998776
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+...+.+ +. ..++.+|+||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 5222110 11 3478899999997655221100
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR----LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
.+.+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|++.. .++..+.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02346789999999999999999999998754 246899999999854 1223456788999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIVD---GVSGFHIDPYNG 678 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~-EiI~d---g~~G~lv~p~d~ 678 (749)
|.|+| .++.+++..+|+. ++++|.||..|+||++++|||+||+|||+++.||+. |++.+ |.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 7778999999995 999999999999999999999999999999999985 77765 67899985 99
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++++.++.
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999976542 36888999999999999 779999999999998764
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=310.51 Aligned_cols=278 Identities=16% Similarity=0.105 Sum_probs=192.5
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHcCCCcEEEEecCCcccc----cCCCcchhhhcC-----------cccc
Q 036539 365 GGKPDLIIGNYSDG---NLVAS------VMASKLGITQATIAHALEKTK----YEDSDVKWKELD-----------PKYH 420 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~------lla~~~gvp~v~t~H~l~~~k----~~~s~~~~~~~~-----------~~y~ 420 (749)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... |+..-..|+.-. ....
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45899999998776 33211 112356799999999986432 111111222100 0001
Q ss_pred cchhhh-HH----HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC
Q 036539 421 FSCQFI-AD----TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP 495 (749)
Q Consensus 421 f~~~~~-~e----~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p 495 (749)
.+.+.. .. ....+.++.+|+.|...++... .... ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~---------------------~~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFN---------------------SLYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHH---------------------HHcC--CCCEEEeCCCcCcccccc
Confidence 111111 11 1123456889999977665211 1112 468999999999754332
Q ss_pred CchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc--cCCCCHHHHHHHHHHhHccCCCeEEEEEeccC
Q 036539 496 YTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL--DVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFF 573 (749)
Q Consensus 496 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~ 573 (749)
..+.... . .++++++|+++||. .+.||++.|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~----------------------~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------R--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------c--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111000 0 03467889999994 47899999999999863 479999999875
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEE
Q 036539 574 DPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTF 653 (749)
Q Consensus 574 ~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVV 653 (749)
. . ...+|.++|+.. +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 36788999994 9999999999999999999999999999
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 654 ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNK----FSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 654 at~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~----ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|+.||++|++.++ +|++++|+|++++|+++ ++...++ +.+++++++.++|||+.++++|+++|+.
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999775 99999999999999854 4444443 3466889998999999999999999963
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=306.85 Aligned_cols=374 Identities=16% Similarity=0.210 Sum_probs=246.4
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHc--CCcccceEEEEeCCCCCCCCC------ccCCc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQ--GLYIKPQIVVVTRLIPDARGT------KCNQE 312 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~--G~eV~~~i~V~T~~~p~~~g~------~~~~~ 312 (749)
|+++.|+.- ..||.++.+.+.|++| .++ ||+|+ |+|......... .|- .
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~ 59 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N 59 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C
Confidence 677765553 2369999999777765 444 88888 999875432100 011 0
Q ss_pred cccccCccceEEEEec-CccCCccccccccccccccc---hHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHH
Q 036539 313 LEPIEGTKHSNILRVP-FKTDKGILHRWVSRFDVYPY---LEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMA 386 (749)
Q Consensus 313 ~e~i~~~~~~~I~rvp-~~~~~~~~~~~isr~~i~py---l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla 386 (749)
.+. . .+..++++. .+ .|+++ ..|+. +.++...+...+....+.+||||+.+...+ ..++.+
T Consensus 60 ~~~-~--~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~-- 126 (419)
T cd03806 60 IEL-D--RPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRL-- 126 (419)
T ss_pred eec-C--CCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHH--
Confidence 111 1 234444442 11 12222 12222 133443444343333244899999886443 222222
Q ss_pred HcCCCcEEEEecCCcccccCCCc--chhhh----------------cCcccccchhhhHHHHHhhhCCEEEeCCHHHHhh
Q 036539 387 SKLGITQATIAHALEKTKYEDSD--VKWKE----------------LDPKYHFSCQFIADTIAMNATDFIIASTFQEIAG 448 (749)
Q Consensus 387 ~~~gvp~v~t~H~l~~~k~~~s~--~~~~~----------------~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~ 448 (749)
..++|++..+|-..... +.. ...+. ..+...+......+...++.||.|+++|....+.
T Consensus 127 -~~~~~~i~y~h~P~~~~--d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~ 203 (419)
T cd03806 127 -LGGCPVGAYVHYPTIST--DMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNH 203 (419)
T ss_pred -hcCCeEEEEecCCcchH--HHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHH
Confidence 23789999999210000 000 00000 0000000001125677889999999999876652
Q ss_pred cCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccC
Q 036539 449 SKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLA 528 (749)
Q Consensus 449 ~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~ 528 (749)
..+. +.. ..++.||+||+|.+.|.+.... .
T Consensus 204 ~~~~--------------------~~~--~~~~~vi~~gvd~~~~~~~~~~----------------------------~ 233 (419)
T cd03806 204 IRSL--------------------WKR--NTKPSIVYPPCDVEELLKLPLD----------------------------E 233 (419)
T ss_pred HHHH--------------------hCc--CCCcEEEcCCCCHHHhcccccc----------------------------c
Confidence 2111 111 2478999999998776543210 0
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC-----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN-----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
..++++|+|+||+.+.||++.+++|+.++.+..+ +++|+|+|++... ++.++.+.++++++++++.++|
T Consensus 234 ~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~V 307 (419)
T cd03806 234 KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDKV 307 (419)
T ss_pred ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCeE
Confidence 2456799999999999999999999999987654 4999999998641 2234567889999999999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP-AEIIV---DGVSGFHIDPYNGD 679 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~-~EiI~---dg~~G~lv~p~d~e 679 (749)
.|+| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+++.||+ .|++. ++.+|++++ |++
T Consensus 308 ~f~g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~ 380 (419)
T cd03806 308 EFVV----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAE 380 (419)
T ss_pred EEec----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHH
Confidence 9999 7889999999995 99999999999999999999999999999999886 47787 899999985 999
Q ss_pred HHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 680 ESSDKIADFFEACKVDP-TYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
++|++|.+++ +++ ..++.+ .++++++.++|||+.+.+
T Consensus 381 ~la~ai~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 381 EYAEAIEKIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 9999997654 544 445555 555556779999998753
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=287.87 Aligned_cols=284 Identities=26% Similarity=0.392 Sum_probs=231.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||+|+... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45999999997654 5666777788899999999986432211110 111234557889999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+...+ .+ ....++.++|||+|...+.+...... ..
T Consensus 158 ~~~~~~~~--------------------~~--~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKA--------------------LG--IDPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHH--------------------hc--CCCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 77662111 11 22678999999999988876543221 01
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
.+. ..+++.|+++|++.+.||++.+++++..+.+..++++|+|+|.+.. .+.+.+.++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 122 4567899999999999999999999999987778999999999876 56677888888999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSD 683 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~ 683 (749)
.+.| .++.+++..+++. ||++++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++++.|++++++
T Consensus 262 ~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 9999 7788999999995 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|.+++ +++.. +++.++++.+.++|||+.+++++.++++
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 996554 77776 7889999999999999999999999875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=308.46 Aligned_cols=284 Identities=13% Similarity=0.123 Sum_probs=204.6
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HcCCCcEEEEecCCcccccCCCc--chhhhcCcccccc--hhhhHHHHHhhhCCEEE
Q 036539 365 GGKPDLIIGNYSDGNLVASVMA-SKLGITQATIAHALEKTKYEDSD--VKWKELDPKYHFS--CQFIADTIAMNATDFII 439 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla-~~~gvp~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~--~~~~~e~~a~~~aD~II 439 (749)
..++|+||++++..+ ..+. +..++|.+.+.|+++...|.... ..+. ....|+.. .....|+..++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 358999999875432 2222 34689999999987533221100 0000 00001100 01124667889999999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
++|..+.+...+. .+.. ..++.+||||+|.+.|.|......
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~~--~~~v~vipngvd~~~f~~~~~~~~------------------ 218 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APEA--AGRITAFPNGVDADFFSPDRDYPN------------------ 218 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCCC--CCCeEEeecccchhhcCCCccccC------------------
Confidence 9999887622111 1111 468999999999988866432110
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHH----HHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME 595 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 595 (749)
.+ ++++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +.+ +
T Consensus 219 -----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~----~ 274 (397)
T TIGR03087 219 -----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV----R 274 (397)
T ss_pred -----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH----H
Confidence 11 34567999999999999999988 56666766778999999999865 122 2
Q ss_pred HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC
Q 036539 596 KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID 674 (749)
Q Consensus 596 ~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~ 674 (749)
+++...+|+|+|. ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+.+|++++
T Consensus 275 ~l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 275 ALAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HhccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 3344577999994 43 57889985 999999997 69999999999999999999997643 3334456799986
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|++++|++|.+ +.+|++.+++|+++|++++.++|||+.+++++.+++.
T Consensus 347 -~~~~~la~ai~~----ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILA----LLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 899999999965 4589999999999999999999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=285.54 Aligned_cols=351 Identities=18% Similarity=0.204 Sum_probs=249.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++... .||...++. .|++.|.++||+|. +++............ ....
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~----~~~~- 52 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP----SNVK- 52 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc----cchh-
Confidence 5788875543 489999999 77777889999999 877653222110000 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYS-DGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H 398 (749)
.......... .. ....+...+.+.+.. .+||+||++.. ...+++.+..+. ++|.+.+.|
T Consensus 53 -~~~~~~~~~~-----------~~----~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 53 -LIPVRVLKLK-----------SL----RDLLAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred -hhceeeeecc-----------cc----cchhHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 0000000000 00 001122222222322 38999999988 555555554444 899999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+............+ ......++.+|.+++.|....+...+. .+.+ .
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~--~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGIP--P 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcCC--c
Confidence 87432211100000 234557889999999997665511111 1111 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765433211 0122 466789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
...++++|+++|.++. .+.+.+.++++++.++|.|.|.. +++..+++. +|++++||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 56677889999999999999943 257788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|++++|||+||+|||+|+.||..|++.++.+|+++++.|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996555433 56789999999999999999988886
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=306.77 Aligned_cols=279 Identities=20% Similarity=0.218 Sum_probs=210.8
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCc--chhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSD--VKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
..++||+|++.+.....+ ++.....+|.+.++|+-+........ ..|. ..|.+ ....++.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999876653333 44556689999999975432211111 1121 11111 122457789999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.+.+...+| +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87665333222222 112 56899999998755433210
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
...+..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999998889999999999976 5789999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDP----YN 677 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p----~d 677 (749)
|.|+| .. ++..+++ .+|++|+||..|+||++++||||||+|||+|+.+ |++|+|.+|.+|+++++ +|
T Consensus 378 V~f~G----~~---~~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKG----HR---NLSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcC----CC---CHHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 99999 33 3556667 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 678 ----GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 678 ----~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++|++|.+ +++ ++.+++|+++|++.+ ++|||+.+++++.++++
T Consensus 450 ~~~~~~~la~~I~~----ll~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVE----YFN-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHH----HhC-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 6777777754 444 557999999999977 78999999999998875
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=296.80 Aligned_cols=276 Identities=15% Similarity=0.200 Sum_probs=218.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCc-EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGIT-QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp-~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
..++|++|+++... +..+.++.++.+.+ ++.++|+..... ......+ .......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~-----~~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGY-----IPLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccc-----hHHHHHHHhcCCEEEECC
Confidence 46788999876554 44555667777776 899999753211 1111111 112234578999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+...+. .+. ...++.+++||++...+.+..
T Consensus 192 ~~~~~~l~~~-------------------~~~--~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR-------------------YPA--YKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH-------------------CCC--ccccEEEEECCcccccccCCC-------------------------
Confidence 8876622211 122 267899999999987654320
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC--CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN--LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
...+++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999988765 466788999876 56788888888888
Q ss_pred CcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY-NG 678 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~-d~ 678 (749)
++|.|+| .++.+++..+++. .+|++|+||..||||++++|||+||+|||||+.||..|+|.++++|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 7778999999974 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
++++++|.++ .+||+.+++|+++|+++++++|||+...+++.
T Consensus 365 ~~la~~I~~l----l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKF----IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999654 47999999999999999999999999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-30 Score=288.92 Aligned_cols=438 Identities=17% Similarity=0.157 Sum_probs=293.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+.+|....|- -++||....+- .|.+.|++.|++|. |+.+.++ .....+....+.+..
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 7899998887753 47999888888 66667899999999 8888877 322222222111110
Q ss_pred -------ccceEEEEecCcc--CCc-cc--ccccccc--ccccch---HHHH--HHHHHHHHHHcC--CCceEEEEcCCC
Q 036539 319 -------TKHSNILRVPFKT--DKG-IL--HRWVSRF--DVYPYL---EGFA--QDATTMILEFLG--GKPDLIIGNYSD 377 (749)
Q Consensus 319 -------~~~~~I~rvp~~~--~~~-~~--~~~isr~--~i~pyl---~~f~--~~~~~~l~~~l~--~~pDIIh~h~~~ 377 (749)
.....+....... ..- ++ ....+|. ..+.+. ++|+ ..+.-++..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0001111111100 000 11 1112221 122211 2222 222233333223 479999999999
Q ss_pred chHHHHHHHHc----CCCcEEEEecCCcccccCC-CcchhhhcCc------ccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 378 GNLVASVMASK----LGITQATIAHALEKTKYED-SDVKWKELDP------KYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 378 ~~lva~lla~~----~gvp~v~t~H~l~~~k~~~-s~~~~~~~~~------~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
.++++.+++.. ..+|.|+|+|++....... .-..+..+.. ...+..+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999884 4799999999985443221 1111111110 01111223345567888999999999888
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
.... .-.| +..+-++. .....++.-|-||+|.+.+.|.++......--....+.+.-+.....+++|+
T Consensus 221 ~Ei~--t~~~----g~gl~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIY--TPEY----GEGLEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhc--cccc----cccchhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 7443 1112 11122211 1113578889999999999987765322111111122345556667788999
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
..+.+.|++.++||++.+||++.+++++..+.+.. ++++|.|.|.. ...+.+..+++.+.. ++...
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEEE
Confidence 66678899999999999999999999999998754 99999999944 456778888888754 44444
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--------GVSGFHIDPYNG 678 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--------g~~G~lv~p~d~ 678 (749)
- ..+..-....++ .+|++++||++|+||++-++||..|+++|+...||.+|.|.+ ..+||++.+.++
T Consensus 355 i----~~~~~la~~i~a-gaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GYDEPLAHLIYA-GADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----eecHHHHHHHHh-cCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 3 333434444555 699999999999999999999999999999999999999975 479999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++++.+|..++.-...++..|+.+..+++. ..|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999876555555559999999887 6899999999999999875
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=278.02 Aligned_cols=249 Identities=14% Similarity=0.101 Sum_probs=183.3
Q ss_pred CCCceEEEEcCCCc---hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIGNYSDG---NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||+||+|.+.. ..++.++++..++|++++.|++........ .......+.+ ....++..++.+|.||++
T Consensus 98 ~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~--~~~~e~~~~~~ad~ii~~ 172 (371)
T PLN02275 98 IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRL--YRWYERHYGKMADGHLCV 172 (371)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHH--HHHHHHHHHhhCCEEEEC
Confidence 46999999987553 356667777889999999998631110000 0000000111 112466788999999999
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchh
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNN 521 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~ 521 (749)
|....+...+ ..|+ ++.+|+||. .+.|.|......
T Consensus 173 S~~~~~~l~~-------------------~~g~-----~i~vi~n~~-~~~f~~~~~~~~-------------------- 207 (371)
T PLN02275 173 TKAMQHELDQ-------------------NWGI-----RATVLYDQP-PEFFRPASLEIR-------------------- 207 (371)
T ss_pred CHHHHHHHHH-------------------hcCC-----CeEEECCCC-HHHcCcCCchhc--------------------
Confidence 9887662110 0133 278999995 455655432110
Q ss_pred hhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH-----------------ccCCCeEEEEEeccCCCCCCcchhHH
Q 036539 522 EHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK-----------------RLRNLVNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.. ++.+.+++++||+.+.||++.+++|+..+. +..++++|+|+|+|+.
T Consensus 208 --~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~---------- 272 (371)
T PLN02275 208 --LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ---------- 272 (371)
T ss_pred --cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC----------
Confidence 00 223457889999999999999999998874 2357899999999988
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 585 AEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 585 ~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
.++++++++++++.+ +.|.+. .++.+++..+|+. +|++|+|+. .|+||++++||||||+|||+|+.||.+
T Consensus 273 --~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 273 --KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred --HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 678999999999976 888661 4678999999994 999998642 489999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
|+|.++.+|++++ |++++|++|.+
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~ 369 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLE 369 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHH
Confidence 9999999999997 79999999854
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=284.86 Aligned_cols=273 Identities=10% Similarity=0.108 Sum_probs=196.0
Q ss_pred CCceEEEEcCCCc-hHH--HHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCc--ccccchhhhHHHHHhhhCCEEEe
Q 036539 366 GKPDLIIGNYSDG-NLV--ASVMASKLGITQATIAHALEKTKYEDSDVKWKELDP--KYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lv--a~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~--~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
..|||||.+.+.. ++. |..++++++ |+|.++|+-... |...... ...+..+.........++|.|++
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-------Yl~~y~~g~L~~~llk~l~~~v~r~hcD~VIa 504 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-------YIKREKNGALQAFFVKHINNWVTRAYCHKVLR 504 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-------HHhHhcchhHHHHHHHHHHHHHHHhhCCEEEc
Confidence 4899999998875 666 888889999 899999986432 1111000 00000000001111122899999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
.|..... +. ...+..| ||||++.|.|......+
T Consensus 505 PS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~------------------ 537 (794)
T PLN02501 505 LSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE------------------ 537 (794)
T ss_pred CCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH------------------
Confidence 9955442 00 1112222 69999999887553322
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+.+|. +...+.++|+||+.+.||++.|++|++.+....++++|+|+|+|+. .+.+++++.++++
T Consensus 538 -r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL- 601 (794)
T PLN02501 538 -RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL- 601 (794)
T ss_pred -HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC-
Confidence 12343 2333458999999999999999999999987778999999999988 6788888998887
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
+|.|+|.+. +...+|+ ++||||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+++ +|+++
T Consensus 602 -~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 489999433 3446777 599999999999999999999999999999999985 447778888865 69999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++++|.+++ .|+..+..+++ ...|||+.+++++++...+-
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~~ 710 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDLD 710 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhccc
Confidence 999997655 56554333321 24899999999999977654
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=278.06 Aligned_cols=264 Identities=20% Similarity=0.249 Sum_probs=190.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCC------cchhhhcCcccccchhhhHHHHHhhhCCEE
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDS------DVKWKELDPKYHFSCQFIADTIAMNATDFI 438 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s------~~~~~~~~~~y~f~~~~~~e~~a~~~aD~I 438 (749)
..++|+||++.... +..+.+..++|.+..+|+.....+... ...+......+.+......+...++.+|.+
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999875432 112224567888888886422111100 000000000000111112345568999999
Q ss_pred EeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcccc
Q 036539 439 IASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKE 518 (749)
Q Consensus 439 It~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 518 (749)
+++|...++...+ .+..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~------------------------~~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKK------------------------YYGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHH------------------------HhCCCcEEECCCCCHhhcCcCC---------------------
Confidence 9999887762110 0133567999999987665421
Q ss_pred chhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 519 DNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 519 ~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998763 78999999876 333333 4
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
++++++|..++ +|++ .+.++.++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999996544 6773 2344455555 679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=276.04 Aligned_cols=273 Identities=22% Similarity=0.248 Sum_probs=211.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCc-chhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSD-VKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~-~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.++|+||++....... .++......+.+.++|+.+........ ..|+. .+. .....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhH------HHHhChhhCCEEEEccHH
Confidence 6899999988765433 234444556678889976432211110 11111 111 111236789999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+...+.. +. ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccchh-------------------------
Confidence 766322110 11 2348899999998776543200
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
...+..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+.++++++++.++|.
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 2445689999999999999999999999998889999999999976 456777888899999999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGDESSD 683 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e~lA~ 683 (749)
|.|+. .++.++++. +|++|+||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99943 368888885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
+|..+ ++|++.+++|++++++.+ ++|||+.+++++
T Consensus 338 ~i~~l----l~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIEL----LNDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHH----HcCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 99654 489999999999999995 899999998763
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=268.70 Aligned_cols=258 Identities=12% Similarity=0.098 Sum_probs=186.8
Q ss_pred EcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHH-hhhCCEEEeCCHHHHhhcCC
Q 036539 373 GNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIA-MNATDFIIASTFQEIAGSKD 451 (749)
Q Consensus 373 ~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~aD~IIt~S~~~~~~~~~ 451 (749)
.|+....+..+-...+.|+|+++++|+.. +... ..+... .+.+|.||++|....+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~------------------~l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~- 110 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTD------------------AISH--TALYFFRNQPVDEIVVPSQWSKNAFY- 110 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeec------------------hhhH--HHHHHHhhccCCEEEECCHHHHHHHH-
Confidence 34333334444444567899999999721 1111 122334 6789999999988776211
Q ss_pred CCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCC
Q 036539 452 RPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRK 531 (749)
Q Consensus 452 ~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~ 531 (749)
..|++. ..++.+||||+|.+.|.+.... ..+
T Consensus 111 -------------------~~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 111 -------------------TSGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred -------------------HcCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 123321 3589999999998877653210 123
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++||+.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997644 1111 12222 234
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC----------------
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP---------------- 675 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p---------------- 675 (749)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678999999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 676 ---YNGDESSDKIADFFEACKVD--PTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~d--p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
.|.+++++++.+.+ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26778888876544 44 34444445555555669999999999999999765
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=267.28 Aligned_cols=333 Identities=15% Similarity=0.140 Sum_probs=209.4
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HcCCCcEEEEecCCcccccCCC---cch-------hhhcCcccccchhhhHHHHHhh
Q 036539 365 GGKPDLIIGNYSDGNLVASVMA-SKLGITQATIAHALEKTKYEDS---DVK-------WKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla-~~~gvp~v~t~H~l~~~k~~~s---~~~-------~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..++||+|+|.|..+..+..++ +..++|+|+|.|+.....+... +++ +........+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4589999999999988888888 5678999999998866553111 122 1111122333445567888999
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEEL 513 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 513 (749)
.||.+||+|...+...+.. .|.+ ..+ |||||+|.+.|.+..+.......-..+|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~L-------------------l~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL-------------------LKRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH-------------------hCCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999887743322 1222 334 9999999999987654332211111222221
Q ss_pred hccccchhhhcCccCCCCCcEEEE-EecccC-CCCHHHHHHHHHHhHcc----CCC---eEEEEEeccCCCCCCcchhH-
Q 036539 514 LYNKEDNNEHIGYLADRKKPIIFS-MARLDV-VKNLTGLTEWYGKNKRL----RNL---VNLVIVGAFFDPSKSKDREE- 583 (749)
Q Consensus 514 l~~~~~~~~~~g~l~~~~k~vIl~-vGRL~~-~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~~~~d~ee- 583 (749)
. ....+.++++ ++++++++| +||++. .||++.|++|++++... ..+ +-|+|+=.+.. +-+.+.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1123455666 667788777 799998 99999999999998651 222 33454443321 000000
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 036539 584 --TAEI-------------------------------------------------------------------KKMHALM 594 (749)
Q Consensus 584 --~~~~-------------------------------------------------------------------~~l~~li 594 (749)
.+-. +.+...+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111112
Q ss_pred HHcCCCC------cEEEecC---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 036539 595 EKYQLKG------QMRWIAA---QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP----A 661 (749)
Q Consensus 595 ~~~~L~~------~V~flG~---~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~----~ 661 (749)
.+.+|.+ +|.|++- .+|.+-..+.+.+++ .||++|+||.+|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 2222222 2455541 222333456778888 599999999999999999999999999999999998 5
Q ss_pred cccccC-ceEEEECCCCH---HHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 036539 662 EIIVDG-VSGFHIDPYNG---DESSDKIADFFEACKVDPTYWNKFSTEGL-KRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 662 EiI~dg-~~G~lv~p~d~---e~lA~aI~~~l~~l~~dp~~~~~ms~~a~-~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|++.++ ..|+.+.+.+. .+.++.|.+++.++.+. +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666555 35777763322 23333344434444443 56777766655 3444889999999999998864
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-26 Score=248.93 Aligned_cols=344 Identities=13% Similarity=0.068 Sum_probs=233.2
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++.. +||.+.... +|++.|.++||+|+ ++|...... ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~~-----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGME-----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCchh-----hhcccc---
Confidence 898887522 367777777 67778899999999 888642110 001111
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
.++.+.+++.....+. ...++.............+.+.+ + +.+|||||+|.+..++.+.++++..++|++++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~i-k--~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKIL-K--RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHH-H--hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2566777765432110 00000000000011111222222 2 3489999999877777777888888999987766
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+... . ..+++..+.+|.+++++.+... ..+ .
T Consensus 123 ~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~-------------------------~~~--~ 153 (357)
T PRK00726 123 NAVP-----------G-----------LANKLLARFAKKVATAFPGAFP-------------------------EFF--K 153 (357)
T ss_pred CCCc-----------c-----------HHHHHHHHHhchheECchhhhh-------------------------ccC--C
Confidence 4210 0 1234567789999988864321 012 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHH-HHHHHh
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLT-EWYGKN 557 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Li-eA~~~l 557 (749)
.++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.++
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred CCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 789999999998765442211 12333 45677889999988888876555 999888
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+|+ ++|+++++|.
T Consensus 210 ~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g--- 261 (357)
T PRK00726 210 PEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG--- 261 (357)
T ss_pred hhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC---
Confidence 653 3 56778888854 34444445 6663 9999943 47889999 5999999872
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGG--------PAEIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+.+++|||+||+|+|++..++ ..+.+.+..+|+++++.| +++++++|.+ +++|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE----LLSDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH----HHcCHHHHHHHHHHHH
Confidence 689999999999999987653 235677778999999888 8999999954 5589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 987 88999999999988764
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=258.71 Aligned_cols=321 Identities=15% Similarity=0.106 Sum_probs=216.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.... ...|+|+.|.+...+++.++.++. ..|+++..|.. +|.++. |..+.. + ..-...+-
T Consensus 120 ~fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hip----fP~~e~-~~~lp~------~-~~ll~~~l 186 (460)
T cd03788 120 KFADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIP----FPSSEI-FRCLPW------R-EELLRGLL 186 (460)
T ss_pred HHHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCC----CCChHH-HhhCCC------h-HHHHHHHh
Confidence 3333444433 356999999998877777776643 58899999965 333332 221110 0 11123566
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.+|.|...+...+..........- +.+ .....++... ..++.++|||||++.|.+..........
T Consensus 187 ~~D~igF~t~~~~~~Fl~~~~~~l---~~~----~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~------ 253 (460)
T cd03788 187 GADLIGFQTERYARNFLSCCSRLL---GLE----VTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQER------ 253 (460)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHc---CCc----ccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHH------
Confidence 799999988765542211100000 000 0000011111 3478999999999988654321110000
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
.++..+. .+++++|+++||+++.||++.+++|+.++.+.+|+ ++|+++|++.. ...++.....
T Consensus 254 --------~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~ 320 (460)
T cd03788 254 --------AAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELR 320 (460)
T ss_pred --------HHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHH
Confidence 0011222 45788999999999999999999999998877665 67999987642 1112333445
Q ss_pred HHHHHHHHHcCCC------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 036539 588 KKMHALMEKYQLK------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATNQ 657 (749)
Q Consensus 588 ~~l~~li~~~~L~------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVat~~ 657 (749)
+++.+++.+.+.. ..|.+++ +.++.+++..+|+ ++|+||+||..|+||++++|||+||+| ||+|+.
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~ 396 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEF 396 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEecc
Confidence 5666666554321 2355553 1678999999999 599999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+|..+. +.+|++++|.|++++|++|.+++ ..+++.++++++++++++ ++|||+..+++++.
T Consensus 397 ~G~~~~---~~~g~lv~p~d~~~la~ai~~~l---~~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 397 AGAAEE---LSGALLVNPYDIDEVADAIHRAL---TMPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred ccchhh---cCCCEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 998877 46799999999999999997654 235688899999999998 78999999999876
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=240.73 Aligned_cols=224 Identities=12% Similarity=0.087 Sum_probs=167.5
Q ss_pred HhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhh
Q 036539 431 AMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEI 510 (749)
Q Consensus 431 a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~ 510 (749)
.|.+.+.+|++|...++.. ...|++ .+ + +|+||+|.+.|.|........
T Consensus 89 ~m~~~~~vIavS~~t~~~L--------------------~~~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~------- 137 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENL--------------------QEVGLQ--VD-L-PVFHGINFKIVENAEKLVPQL------- 137 (335)
T ss_pred HHhcCCEEEeCCHHHHHHH--------------------HHhCCC--Cc-e-eeeCCCChhhcCccchhhHHH-------
Confidence 4666778999998776621 123444 22 3 478999999987754221111
Q ss_pred HHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHH
Q 036539 511 EELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAE 586 (749)
Q Consensus 511 ~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 586 (749)
++.++.. .++.++|+++||+++.||++.|++|+.++.+..++ ++++++|++
T Consensus 138 ----------r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 138 ----------KQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----------HHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 1223321 14667899999999999999999999999876654 578877632
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
..+++++.++|+|+|... .++.+++.++|+ ++|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~-~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYG-AMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHH-hCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 556789999999 499999999999999999999999999999999999997542
Q ss_pred ------------------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 667 ------------------GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 667 ------------------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
...||.+++.|++++|++|..+++ ..+++.+ +.++++++ ++|+|+.++++++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~~---~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREER---SMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhhh---hHHHHHHH-HhcCHHHHHHHhh
Confidence 235889999999999999987652 2344433 67777776 8999999999886
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=236.70 Aligned_cols=324 Identities=14% Similarity=0.105 Sum_probs=221.3
Q ss_pred CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccc
Q 036539 260 DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRW 339 (749)
Q Consensus 260 ~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~ 339 (749)
.+||...++. .|++.|.++||+|+ |+|...... .+.. ...++.+.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC-----
Confidence 3578888777 77778899999999 888753211 0111 11246777777643211
Q ss_pred ccccccccchH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhh
Q 036539 340 VSRFDVYPYLE------GFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWK 413 (749)
Q Consensus 340 isr~~i~pyl~------~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~ 413 (749)
...+..+. .....+.+.+. +.+||+||+|.+..++.+.++++..++|+++..|+...
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 11111111 11112222222 34899999998777777778888899999875553210
Q ss_pred hcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC
Q 036539 414 ELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY 493 (749)
Q Consensus 414 ~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f 493 (749)
. ..+++....+|.|+++|+...+. ++ ..++.+|+||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHh
Confidence 0 11344567799999999776540 12 5689999999998766
Q ss_pred CCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEE-EEEec
Q 036539 494 FPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNL-VIVGA 571 (749)
Q Consensus 494 ~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~L-vIVG~ 571 (749)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54221 123455 567788888887777777654 5588888863 35664 46777
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc
Q 036539 572 FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651 (749)
Q Consensus 572 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP 651 (749)
+ . .+++.+.++++ .++|.|.|++ +++..+|+. +|++|.+|- |++++|||++|+|
T Consensus 221 g-~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~P 274 (350)
T cd03785 221 G-D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLP 274 (350)
T ss_pred c-c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCC
Confidence 6 4 45666777665 4789999943 578899994 999998762 6899999999999
Q ss_pred EEEcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 652 TFATNQGG--------PAEIIVDGVSGFHIDPY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 652 VVat~~GG--------~~EiI~dg~~G~lv~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
||+++.++ ..+.+.++.+|+++++. |+++++++|.++ ++|++.+++|++++++++ +.+.-+++++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLEL----LSDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHH----hcCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 99987654 24667777899999987 899999999654 479999999999999887 5676666553
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=233.77 Aligned_cols=326 Identities=15% Similarity=0.110 Sum_probs=211.3
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccccc
Q 036539 262 GGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVS 341 (749)
Q Consensus 262 GG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~is 341 (749)
||..-++. .+. .|+++|.++||+|+ ++|+..... . .. ....++.+.+++.....+ .+
T Consensus 8 g~~~g~~~-~~~----~La~~L~~~g~eV~----vv~~~~~~~-----~-~~---~~~~g~~~~~i~~~~~~~-----~~ 64 (348)
T TIGR01133 8 GGTGGHIF-PAL----AVAEELIKRGVEVL----WLGTKRGLE-----K-RL---VPKAGIEFYFIPVGGLRR-----KG 64 (348)
T ss_pred CccHHHHh-HHH----HHHHHHHhCCCEEE----EEeCCCcch-----h-cc---cccCCCceEEEeccCcCC-----CC
Confidence 55555554 112 67888999999999 888632110 0 00 011246677777543211 00
Q ss_pred ccccccch---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcc
Q 036539 342 RFDVYPYL---EGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPK 418 (749)
Q Consensus 342 r~~i~pyl---~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~ 418 (749)
....++.. ......+.+.+. +.+||+||+|.+..+..+.++++..++|++...|+.. .
T Consensus 65 ~~~~l~~~~~~~~~~~~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------~- 125 (348)
T TIGR01133 65 SFRLIKTPLKLLKAVFQARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV---------------P- 125 (348)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC---------------c-
Confidence 11111111 111122222222 3489999999877777777788888999874333210 0
Q ss_pred cccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCch
Q 036539 419 YHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTE 498 (749)
Q Consensus 419 y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~ 498 (749)
. ..+++..+.+|.+++.|+...+ | -+..+|+||+|...+.+...
T Consensus 126 -~-----~~~~~~~~~~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~ 169 (348)
T TIGR01133 126 -G-----LTNKLLSRFAKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVP 169 (348)
T ss_pred -c-----HHHHHHHHHhCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccch
Confidence 0 1134566789999999976544 0 02368999998765543211
Q ss_pred HHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEEEEEeccCCCCC
Q 036539 499 KQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNLVIVGAFFDPSK 577 (749)
Q Consensus 499 ~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~ 577 (749)
++.+++ ++++++|+++|+....|++.. +++|+.++.+. ++++++++++..
T Consensus 170 ----------------------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~--- 220 (348)
T TIGR01133 170 ----------------------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND--- 220 (348)
T ss_pred ----------------------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch---
Confidence 012454 567788999998888888655 55888888653 466655554433
Q ss_pred CcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 036539 578 SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 657 (749)
Q Consensus 578 ~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~ 657 (749)
.+.+++.++++++...+.|.. . ++..+|+ ++|++|.+| + |++++|||++|+|+|+++.
T Consensus 221 ---------~~~l~~~~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 221 ---------LEKVKNVYQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPY 278 (348)
T ss_pred ---------HHHHHHHHhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeC
Confidence 356777778877755555542 1 6788888 599999875 2 7899999999999999977
Q ss_pred cc-------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 658 GG-------PAEIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 658 GG-------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
+| ..+++.++.+|++++++| +++++++|.+ +++||+.+++|++++++++ +...-+.+++
T Consensus 279 ~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 279 PYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK----LLLDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH----HHcCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 54 235788889999999887 9999999955 4589999999999998876 4555554443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=243.58 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=215.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+.. ..-|+|.+|.....+++.++.++. ..++.+..|.. +|.+++... +. ....-...|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~~-lp-------~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYRT-LP-------WRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHhh-CC-------cHHHHHHHHh
Confidence 4444455543 245899999999888888887764 45788889954 443432211 11 0011234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC--CCCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV--LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~--~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.||.|...|+..+..+.......- ++-....++.. -..++.++|||||++.|.+.......... .
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l--------~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~----~- 249 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSREL--------GLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR----I- 249 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHh--------CCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH----H-
Confidence 999999999988764333211100 00000011111 13478899999999998764322110000 0
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
...++.+ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ...++.....
T Consensus 250 ------~~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~ 315 (456)
T TIGR02400 250 ------AELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLR 315 (456)
T ss_pred ------HHHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHH
Confidence 0011111 3678999999999999999999999998776665 56888875322 1112222223
Q ss_pred HHHHHHHHHcC-CCCc-----EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 036539 588 KKMHALMEKYQ-LKGQ-----MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATNQ 657 (749)
Q Consensus 588 ~~l~~li~~~~-L~~~-----V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVat~~ 657 (749)
+.+++++.+.+ ..+. +.+++ ..++.+++..+|+ ++|++|+||..||||++++||||||+| +|+|+.
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~ 391 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEF 391 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCC
Confidence 33444433221 1111 44544 2677899999999 599999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
+|..+.+. +|++++|.|++++|++|.+++ ..+++.+++..+++++++ .+||+...++++++-
T Consensus 392 ~G~~~~l~---~gllVnP~d~~~lA~aI~~aL---~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 392 AGAAQELN---GALLVNPYDIDGMADAIARAL---TMPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCChHHhC---CcEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 99888884 799999999999999997655 247889999999999998 679999999998863
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=234.88 Aligned_cols=285 Identities=13% Similarity=0.105 Sum_probs=193.0
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+||++..+........+++.|+|++.+-|.+.. .+...|+. .. ...+..++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~----~s~~~~~~-------~~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSE----RSFKRYQK-------FK--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCCh----hhHHHHHH-------HH--HHHHHHHHhCCEEEECCHHHH
Confidence 899999885553222233457789999877654311 01111111 11 123456788999999998877
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+.. ...|++ .. +.+++|+ +.+.+.+....... . ..++.++
T Consensus 191 ~~l--------------------~~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~--------------~~r~~~~- 230 (425)
T PRK05749 191 ERF--------------------LALGAK--NE-VTVTGNL-KFDIEVPPELAARA-A--------------TLRRQLA- 230 (425)
T ss_pred HHH--------------------HHcCCC--CC-cEecccc-cccCCCChhhHHHH-H--------------HHHHHhc-
Confidence 621 122444 44 7788884 33333221111110 0 0112233
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
+++++++++|+. .|+.+.|++|+.++.+..|+++|+|+|+|+. ..+++.+++++.|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888864 6889999999999887788999999999875 125788888988885 35554
Q ss_pred cCccCc--------CChHHHHHHHHccCcEEE-ECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 036539 607 AAQSDR--------LRNGELYRCIADTKGAFV-QPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDG-VSGFHIDP 675 (749)
Q Consensus 607 G~~~~~--------~~~~el~~~la~aadvfV-~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg-~~G~lv~p 675 (749)
|..... -..+++..+|+ .+|+++ .+|..|++|++++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 02469999999 599955 478889999999999999999999864 5666766543 46888889
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|+++++++|.+ +++||+.+++|+++|++.+.++ ...++++++++..
T Consensus 373 ~d~~~La~~l~~----ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~~ 419 (425)
T PRK05749 373 EDAEDLAKAVTY----LLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLEP 419 (425)
T ss_pred CCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHH
Confidence 999999999965 4589999999999999999665 3666777776654
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-23 Score=228.73 Aligned_cols=262 Identities=13% Similarity=0.057 Sum_probs=179.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||++++..++.....++..++|+++++++.... ..+..+.+|.++++|...
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHHH
Confidence 48999999877665444444445679988666543110 012456899999999876
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+. ....|++ ..|+.++++.++.....+..... .++++|
T Consensus 159 ~~~--------------------l~~~gi~--~~ki~v~G~p~~~~f~~~~~~~~-------------------~~~~~~ 197 (380)
T PRK13609 159 KKV--------------------LVDIGVP--PEQVVETGIPIRSSFELKINPDI-------------------IYNKYQ 197 (380)
T ss_pred HHH--------------------HHHcCCC--hhHEEEECcccChHHcCcCCHHH-------------------HHHHcC
Confidence 551 1123555 67888876655432221111111 124466
Q ss_pred ccCCCCCcE-EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRKKPI-IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 555554 55568888899999999988642 5789988876432 12456666666654 6899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGP----AEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~----~EiI~dg~~G~lv~p~d~e 679 (749)
|+|++. ++..+|+ ++|++|. ++.|++++|||+||+|+|+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999543 5788888 5999885 566999999999999999985 5553 123433 45555567999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++|.+ +++||+.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~~----ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 327 EVFAKTEA----LLQDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHHHH----HHCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhh
Confidence 99999955 4589999999999998765 67899999999998764
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=206.21 Aligned_cols=160 Identities=36% Similarity=0.538 Sum_probs=143.7
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+.++++|+++||+++.||++.+++++..+... .+++.|+|+|.+.. ...+...++.+++..++.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999763 68899999996655 677888999999999999999
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 6668899999995 99999999999999999999999999999999999999999999999999999999999965
Q ss_pred HHHHhcCCHHHHHHHHHHHHHH
Q 036539 688 FFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 688 ~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
++ .+++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 54 7899999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=239.78 Aligned_cols=321 Identities=12% Similarity=0.104 Sum_probs=215.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+..+ .-|+|-.|.....+++.++.++ ..+++.+..|.. +|.++++...- ....-...|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiP----FPs~e~fr~lp--------~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTP----FPSSEIYKTLP--------SRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCC----CCCHHHHhhCC--------CHHHHHHHHh
Confidence 34444555442 3489999999988888888775 457888999965 44443221110 0111234778
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHH---hhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQ---RRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~---~rl~~~~~ 508 (749)
.||.|-..|...+..+.......-. +-....++... ..++.++|||||++.|.+..... .+...
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~--------~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~--- 271 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILG--------VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKE--- 271 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhC--------ccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHH---
Confidence 8999999998776533221100000 00000111111 24788999999998886532211 11000
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCe----EEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLV----NLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++. ..++++|+++||+++.||+..+++||.++.+.+|++ .|+.+++... .+.
T Consensus 272 -----------lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr-------~~~ 328 (797)
T PLN03063 272 -----------LKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR-------NDV 328 (797)
T ss_pred -----------HHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC-------Cch
Confidence 0011 235789999999999999999999999998777765 3554543221 111
Q ss_pred HHHHHHHHHHHHcC--CC---CcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EE
Q 036539 585 AEIKKMHALMEKYQ--LK---GQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TF 653 (749)
Q Consensus 585 ~~~~~l~~li~~~~--L~---~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VV 653 (749)
.+.+++++.++++. ++ +.+.|.+ +....++.+++..+|+ +||+||+||..||||++++|||+||+| +|
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlV 407 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLV 407 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEE
Confidence 12334444454442 22 2233333 1113678899999999 599999999999999999999999999 99
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 654 ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 654 at~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|..+|.++.+ +.+|++++|.|++++|++|.+++. -+++.+++..++.++++ .++||...++.+++-+..
T Consensus 408 lSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 408 LSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred eeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 99999999986 557999999999999999976652 38888888889999998 889999999999886643
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-21 Score=210.68 Aligned_cols=267 Identities=15% Similarity=0.079 Sum_probs=177.2
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 364 LGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 364 l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
++.+.+|+..+.+....++.. ..+.++|+.+++..... +... .. ....+...++.||.|+++|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~-~~~~-------~~-----~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAF-PGGP-------PE-----LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhcc-CCCC-------HH-----HHHHHHHHHHhCCEEEECCH
Confidence 355666777765555433333 56788888888753211 1100 00 01346778999999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+... . ...++.+||||+|.+.|.+........ +.
T Consensus 163 ~l~~~~~----------------------~---~~~~i~~i~ngvd~~~f~~~~~~~~~~------------------~~ 199 (373)
T cd04950 163 SLYEAKR----------------------R---LNPNVVLVPNGVDYEHFAAARDPPPPP------------------AD 199 (373)
T ss_pred HHHHHHh----------------------h---CCCCEEEcccccCHHHhhcccccCCCh------------------hH
Confidence 7665111 0 136899999999999886643221100 00
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
....++++|+|+|++++.++++.+.+++. ..|+++|+|+|++... ..... ....++|
T Consensus 200 ---~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~~----~~~~~nV 256 (373)
T cd04950 200 ---LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPSA----LLRLPNV 256 (373)
T ss_pred ---HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChhH----hccCCCE
Confidence 01346789999999999888776655443 3478999999998320 01111 1114789
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALY-----EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~-----E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
.|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|+
T Consensus 257 ~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~ 327 (373)
T cd04950 257 HYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDP 327 (373)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCH
Confidence 9999 7788999999995 9999999863 4689999999999999999987654 444433444 45699
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++++|.+++. ..++...+ ++++ +.+.|||+..++++++...
T Consensus 328 ~~~~~ai~~~l~--~~~~~~~~----~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 328 EEFVAAIEKALL--EDGPARER----RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHHh--cCCchHHH----HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 999999977542 12222222 2222 4588999999999996543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=231.44 Aligned_cols=323 Identities=14% Similarity=0.087 Sum_probs=212.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .-|+|..|.....+++.++.++. ..++.+..|.. +|.+++.... + ....-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~p----fP~~~~f~~l--p------~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIP----FPSFEVFRLL--P------WREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCC----CCChHHHhhC--C------ChHHHHHHHh
Confidence 34444454433 34899999999988888887653 56788899965 4433333221 1 0011234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.+|.|-..|...+..+.......-. ++. ...++.+. ..++.++|||||++.|.+.......... .+
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~-----~~~---~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~----~~ 256 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLG-----YET---ELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE----IR 256 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcC-----Ccc---CCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH----HH
Confidence 8999998888755532211110000 000 00011111 2368899999999988764321110000 00
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
+ .++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.. ..-++..+..
T Consensus 257 ~-------lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~ 321 (726)
T PRK14501 257 R-------LRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMK 321 (726)
T ss_pred H-------HHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHH
Confidence 0 0011 24677999999999999999999999998776675 78999985432 0012222334
Q ss_pred HHHHHHHHHcC----C---CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHc-----CCcEEEc
Q 036539 588 KKMHALMEKYQ----L---KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNC-----GLPTFAT 655 (749)
Q Consensus 588 ~~l~~li~~~~----L---~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~-----GlPVVat 655 (749)
+.+.+++.+.+ . .+-+.+.| .++.+++..+|+ ++|+||+||..||||++++|||+| |.||+++
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~ 396 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSE 396 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEec
Confidence 44555554432 1 12234556 778999999999 599999999999999999999999 5577777
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 656 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
..|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||...++++++.|+.-
T Consensus 397 ~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 397 MAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred ccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 778888876 4899999999999999976552 23445555557788888 7899999999999877643
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-20 Score=207.59 Aligned_cols=264 Identities=16% Similarity=0.122 Sum_probs=183.6
Q ss_pred CCceEEEEcCCCch-HHHHHHHH-----cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEE
Q 036539 366 GKPDLIIGNYSDGN-LVASVMAS-----KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 366 ~~pDIIh~h~~~~~-lva~lla~-----~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
.+||+||++++..+ ..+.++++ ..++|++++++++... . ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~--------------~---------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTC--------------H---------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCc--------------C---------cccccCCCCEEE
Confidence 48999999765532 22223332 2478988877765210 0 011357899999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
++|....+. ....|++ ..|+.++++++|.+.+.+..... .
T Consensus 156 ~~s~~~~~~--------------------l~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~------------------~ 195 (382)
T PLN02605 156 CPSEEVAKR--------------------ALKRGLE--PSQIRVYGLPIRPSFARAVRPKD------------------E 195 (382)
T ss_pred ECCHHHHHH--------------------HHHcCCC--HHHEEEECcccCHhhccCCCCHH------------------H
Confidence 999876651 1233665 78999999999876544332211 1
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeE-EEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR----LRNLVN-LVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
.++.+|+ ++++++|+++||....|++..+++++..... ..++.+ ++++|.+.. ..+.+.+.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 2355787 7788999999999999999999999986531 134565 556665422 12333332
Q ss_pred HHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCc
Q 036539 595 EKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ------GGPAEIIVDGV 668 (749)
Q Consensus 595 ~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~------GG~~EiI~dg~ 668 (749)
....+|+|+|+.+ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+.. .+.++.
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCC
Confidence 2235799999543 6899999 599999865 48999999999999999984 4443 344555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVD-PTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~d-p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++.+
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELVR 380 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHhh
Confidence 67754 69999999996554 56 999999999999987 77888999988877643
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-20 Score=187.51 Aligned_cols=120 Identities=35% Similarity=0.532 Sum_probs=103.8
Q ss_pred EEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCC-h
Q 036539 537 SMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR-N 615 (749)
Q Consensus 537 ~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~-~ 615 (749)
|+|++.+.||++.+++++..+.+..++++++++|++.. .....+.+.+.+..++|.++| .++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 89999999999999999999988788999999999977 334444467778889999999 443 3
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 036539 616 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI 673 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv 673 (749)
+++..+++ .+|+++.||..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~-~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLA-AADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhh-cCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 44455554 5999999999999999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-20 Score=212.45 Aligned_cols=343 Identities=14% Similarity=0.128 Sum_probs=232.9
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHc--------------CCCcEEEEecCCcccc---cCCCcc-------------
Q 036539 361 LEFLGGKPDLIIGNYSDGNLVASVMASK--------------LGITQATIAHALEKTK---YEDSDV------------- 410 (749)
Q Consensus 361 ~~~l~~~pDIIh~h~~~~~lva~lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~------------- 410 (749)
++.+..+||+||+|.|.++++...+.+. ...+.++|.|++...- ++...+
T Consensus 155 l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl 234 (601)
T TIGR02094 155 LRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGL 234 (601)
T ss_pred HHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCC
Confidence 3445679999999999998877664321 1356899999985433 221111
Q ss_pred hhhhcCcc-cc---cchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC
Q 036539 411 KWKELDPK-YH---FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP 486 (749)
Q Consensus 411 ~~~~~~~~-y~---f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn 486 (749)
.+..+... .. ...++..-..++..||.|.+||+...+-.++..+. + ..+.+....++.=|.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~-----------l---~~~~~~~~~~i~gItN 300 (601)
T TIGR02094 235 PREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQF-----------L---YPGYEEEEVPIGYVTN 300 (601)
T ss_pred CHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHh-----------h---hhhcccccCCccceeC
Confidence 11111000 00 01234556778999999999998665511111100 0 0011111335788999
Q ss_pred CCCCCCCCCCchHHhhhhccchh---------------------h-HHhhccccchh---------------------hh
Q 036539 487 GADQSVYFPYTEKQRRLTKFHPE---------------------I-EELLYNKEDNN---------------------EH 523 (749)
Q Consensus 487 GvD~~~f~p~~~~~~rl~~~~~~---------------------~-~~~l~~~~~~~---------------------~~ 523 (749)
|||...+.|.+...-..+...+. + +.+.-++.... ..
T Consensus 301 GId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 301 GVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred CccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 99999987654322100000000 0 11111111111 13
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc--C--CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL--R--NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
+|...+++.++|++++|+..+||++.++.++.++.+. . .+++||+.|.+.. .|..-.+.++.+..++++...
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la~~~~~ 456 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFSKRPEF 456 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHHhcccC
Confidence 5555678899999999999999999999998888642 1 3699999999965 344555677888888887556
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEE-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC--
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQ-PAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP-- 675 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~-PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p-- 675 (749)
.++|.|+- ..+. .+.+.+-.++|++++ ||+ +|++|++-+=||..|.+.+++--|...|.. ++.+||.|.+
T Consensus 457 ~~kv~f~~----~Yd~-~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~ 530 (601)
T TIGR02094 457 RGRIVFLE----NYDI-NLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGE 530 (601)
T ss_pred CCCEEEEc----CCCH-HHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCc
Confidence 77999986 3333 555555557999999 999 999999999999999999999999888887 6779999984
Q ss_pred ----------CCHHHHHHHHHHHH-HHhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 676 ----------YNGDESSDKIADFF-EACKVD-----PTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 676 ----------~d~e~lA~aI~~~l-~~l~~d-----p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|++++-++|.+.+ ....++ |..|.+|.++|++.....|||++++++|.++|
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 79999999998766 333343 67799999999987666899999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-19 Score=185.81 Aligned_cols=291 Identities=24% Similarity=0.308 Sum_probs=207.9
Q ss_pred ceEEEEcCCCchH---HHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 368 PDLIIGNYSDGNL---VASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 368 pDIIh~h~~~~~l---va~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
+|++|.+...... .........+.+.+...|....................+. ............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987765433 3445555677888888887643221111111000000000 000001111246778887765
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..... ..... ..++.++||+++.+.+.+.. .
T Consensus 161 ~~~~~--------------------~~~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELL--------------------EALGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHH--------------------HHhCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42200 00011 23788999999988776540 1
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
++.....+..++++||+.+.||++.+++++..+....++++++++|.+... .+.+.+++.+++..+++.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 110011147899999999999999999999999887666899999999761 245566888888888999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
|+| .++.+++..+++. +|++++||.+|+||++++|||++|+|||+++.+|..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5667788888884 89999999999999999999999999999999999999998877997777789999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+..++ ++++.++.+++.+++.+.+.|+|+.+++++.+++...
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 97654 6778889999877788778999999999999887654
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=199.84 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=177.0
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||++++..++.....++..++|+++..++.... . .+..+.+|.+++.|...
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------~------------------~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------K------------------NWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------c------------------ccccCCCCEEEECCHHH
Confidence 49999999866554322222345689986554432100 0 11346789999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+. ....|++ ..++.++.++++.....+..... .++++|
T Consensus 159 ~~~--------------------l~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~-------------------~~~~~~ 197 (391)
T PRK13608 159 KQD--------------------FIDVGID--PSTVKVTGIPIDNKFETPIDQKQ-------------------WLIDNN 197 (391)
T ss_pred HHH--------------------HHHcCCC--HHHEEEECeecChHhcccccHHH-------------------HHHHcC
Confidence 651 1234665 67888887877644322221111 123466
Q ss_pred ccCCCCCcE-EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRKKPI-IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. +...++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHHHHHhccCCCeE
Confidence 6 455555 5678899989999999998632 235788887765432 11122333344556899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCceEEEECCCCHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGG----PAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG----~~EiI~dg~~G~lv~p~d~e 679 (749)
++|+. +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ....+.+...|++ +.|++
T Consensus 260 ~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPE 326 (391)
T ss_pred EEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHH
Confidence 99953 36899999 5999997 357999999999999999985 333 1223345556665 45899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++|.+ +++|++.+++|++++++.. +.|+++.+++.+++++.
T Consensus 327 ~l~~~i~~----ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVAS----LTNGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHH----HhcCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 99999955 4589999999999999986 67999999999998764
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.2e-18 Score=189.78 Aligned_cols=324 Identities=13% Similarity=0.057 Sum_probs=216.5
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
.+..+.... ..-|+|-.|.....+++.++.++. ..++.+..|.. +|.+++... + + ....-...|-.
T Consensus 122 FA~~i~~~~-~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-P------~r~~ll~glL~ 188 (487)
T TIGR02398 122 FAEAACLEA-AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-P------WREQIIGSLLC 188 (487)
T ss_pred HHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-C------chHHHHHHHhc
Confidence 333444443 234899999999888888887653 46777888864 443332211 1 0 00112336778
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccc--cccc--cccc---------hhhhccCCCCC--CceEEecCCCCCCCCCCCchH
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESH--TAFT--LPGL---------CRVVKGIDVLD--PKFNIAAPGADQSVYFPYTEK 499 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~--~~~~--~p~l---------y~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~~ 499 (749)
||.|=..|...+..+.+...+.-.. ..-+ .+.. -....++.+.. -++.++|.|||++.|.+....
T Consensus 189 aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC
Confidence 9999888887765433322111000 0000 0000 00000122112 257889999999988654221
Q ss_pred H---hhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEecc
Q 036539 500 Q---RRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAF 572 (749)
Q Consensus 500 ~---~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g 572 (749)
. .+.. ..++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|+++|.+
T Consensus 269 ~~~~~~~~--------------~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~p 329 (487)
T TIGR02398 269 ASIREMME--------------RIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329 (487)
T ss_pred chHHHHHH--------------HHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCC
Confidence 1 1111 1122333 578999999999999999999999999877775 799999987
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHc-------CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHH
Q 036539 573 FDPSKSKDREETAEIKKMHALMEKY-------QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645 (749)
Q Consensus 573 ~~~~~~~d~ee~~~~~~l~~li~~~-------~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEA 645 (749)
.. +..++..+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ +|||++.+|..||++|+..|+
T Consensus 330 sr---~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 330 AA---SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred Cc---ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhH
Confidence 54 22334445566677776664 3334456666 788999999999 599999999999999999999
Q ss_pred HHcCC----cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 646 MNCGL----PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 646 Ma~Gl----PVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
|+|+. |+|.|..+|.++.+. .+++++|.|++++|++|.+++. -.++.+++--+..++++ .++|....++
T Consensus 402 va~~~~~~GvLILSefaGaa~~l~---~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~ 474 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVELK---GALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWAD 474 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhcC---CCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHH
Confidence 99998 999999999987773 5899999999999999987663 34555555556666666 7888888888
Q ss_pred HHHHH
Q 036539 722 KMLNM 726 (749)
Q Consensus 722 ~ll~l 726 (749)
.+++-
T Consensus 475 ~fl~~ 479 (487)
T TIGR02398 475 EFLAA 479 (487)
T ss_pred HHHHH
Confidence 87753
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.6e-18 Score=187.76 Aligned_cols=275 Identities=14% Similarity=0.121 Sum_probs=178.2
Q ss_pred CCceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|.. ..++.++++++.+|+|++.+-+++... + .+..+... .......+.+|.++++|..
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~-----~-~~~~~~~~-------~~r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG-----D-RYSPMPEE-------INRQLTGHIADLHFAPTEQ 151 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC-----C-CCCCCccH-------HHHHHHHHHHHhccCCCHH
Confidence 48999999964 346778889999999998665543110 0 00000000 0011223458999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+.. ...|++ ..++.+++||+....+.+...... ...++.+
T Consensus 152 ~~~~l--------------------~~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~~ 193 (365)
T TIGR00236 152 AKDNL--------------------LRENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSEF 193 (365)
T ss_pred HHHHH--------------------HHcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHhc
Confidence 76621 123665 779999999973222211110000 0011223
Q ss_pred CccCCCCCcEEEEEe-ccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 525 GYLADRKKPIIFSMA-RLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 525 g~l~~~~k~vIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+. +++++++.+ |.. ..||++.+++|+.++.+..++++++++|++.. ...+. +.+..+..++
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~~---~~~~~~~~~~ 256 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVREP---LHKHLGDSKR 256 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHHH---HHHHhCCCCC
Confidence 31 234555554 543 45899999999999877678899998875533 01111 3334456678
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++ +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99999 6667788999995 99999987 66789999999999996 778888988766 56666 4799999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++|.+ +++|++.+++|++++..+. +..+++.+++.+.+
T Consensus 325 ~~ai~~----ll~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKR----LLTDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHH----HHhChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999965 4479999998887663222 33455555555444
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-17 Score=180.13 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=167.2
Q ss_pred Cc-eEEEEcCCCchH---HHHHH--HHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEe
Q 036539 367 KP-DLIIGNYSDGNL---VASVM--ASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 367 ~p-DIIh~h~~~~~l---va~ll--a~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
++ |+||.+++.... ...++ .++.|+|++.++|+++....... .+ + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~---------~~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN---------YY-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc---------ch-h---hHHHHHHHHhCCEEEE
Confidence 66 999999876421 12222 23448999999999854321100 00 0 1335668899999999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
.|....+.. ..+|++ ..++.+++++.+.....+..
T Consensus 130 ~S~~~~~~l--------------------~~~g~~--~~~i~~~~~~~~~~~~~~~~----------------------- 164 (333)
T PRK09814 130 HSKKMKDRL--------------------VEEGLT--TDKIIVQGIFDYLNDIELVK----------------------- 164 (333)
T ss_pred CCHHHHHHH--------------------HHcCCC--cCceEecccccccccccccc-----------------------
Confidence 999887621 223554 55777776655432110000
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
.+..++.|+|+|++.+.+++. + ..++++|+|+|+|+. .+ ...
T Consensus 165 -------~~~~~~~i~yaG~l~k~~~l~---~-------~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 165 -------TPSFQKKINFAGNLEKSPFLK---N-------WSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -------cccCCceEEEecChhhchHHH---h-------cCCCCeEEEECCCcc------------cc---------ccC
Confidence 023456899999999543211 1 236799999999976 11 245
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCC-----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-----------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS 669 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-----------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~ 669 (749)
++|.|+| +++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 8889999999985 44443321 13588999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 670 G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
|++++ +.++++++|.. -+++.+++|++++++.+ +++.-..++++
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 99998 77888888854 24577899999999877 55554444444
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-16 Score=164.11 Aligned_cols=389 Identities=15% Similarity=0.204 Sum_probs=241.9
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCC---ccCCccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGT---KCNQELE 314 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~---~~~~~~e 314 (749)
...++++.|...- .||-+++..--+|++.+. -..+ +++|.|..+.-.... ...+..+
T Consensus 43 ~ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~----~~viYsGD~n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 43 VKTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNN----VIVIYSGDFNVTPENILNKVKNKFD 102 (465)
T ss_pred ceEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCc----eEEEEeCCCCCCHHHHHHHHHHhcC
Confidence 3568888777753 377788888677765321 1222 234666654211000 0001111
Q ss_pred cccCccceEEEEecCccCCccccccccccccccchHHHHHH---HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCC
Q 036539 315 PIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQD---ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGI 391 (749)
Q Consensus 315 ~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~---~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gv 391 (749)
-.-+..++..+.+..+. |++ ...|+...-..+. +.-.+-+..+..|||-+-....+ +.-.+.++..++
T Consensus 103 idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~ 173 (465)
T KOG1387|consen 103 IDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRI 173 (465)
T ss_pred ceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccC
Confidence 11223355555554432 222 2234433222222 22223333466899988554332 112234446789
Q ss_pred cEEEEecCCcccc-c-------CCC-cchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccccc
Q 036539 392 TQATIAHALEKTK-Y-------EDS-DVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAF 462 (749)
Q Consensus 392 p~v~t~H~l~~~k-~-------~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~ 462 (749)
|++.-+|-.-..+ + +.+ -..|..+.....|++.+ ..+=..||.++++|.=........|
T Consensus 174 ~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY---~~~G~~ad~vm~NssWT~nHI~qiW--------- 241 (465)
T KOG1387|consen 174 PVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLY---QSAGSKADIVMTNSSWTNNHIKQIW--------- 241 (465)
T ss_pred ceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHH---HhccccceEEEecchhhHHHHHHHh---------
Confidence 9999889321110 0 011 22233222111122211 1233568999998854333222221
Q ss_pred ccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEeccc
Q 036539 463 TLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLD 542 (749)
Q Consensus 463 ~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~ 542 (749)
+ ..+..+|.|..+.+.... ..+- ...+.+.++++|.+.
T Consensus 242 ------------~--~~~~~iVyPPC~~e~lks---------------------------~~~t-e~~r~~~ll~l~Q~R 279 (465)
T KOG1387|consen 242 ------------Q--SNTCSIVYPPCSTEDLKS---------------------------KFGT-EGERENQLLSLAQFR 279 (465)
T ss_pred ------------h--ccceeEEcCCCCHHHHHH---------------------------Hhcc-cCCcceEEEEEeecC
Confidence 1 235667877666542211 1111 145678899999999
Q ss_pred CCCCHHHHHHHHHHhHcc------CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChH
Q 036539 543 VVKNLTGLTEWYGKNKRL------RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNG 616 (749)
Q Consensus 543 ~~Kgl~~LieA~~~l~~~------~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~ 616 (749)
|.||.. +++.++....+ .++++|+|+|+-.. .++++..+.|+.++++++++++|.|-- .++.+
T Consensus 280 PEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~ 348 (465)
T KOG1387|consen 280 PEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYE 348 (465)
T ss_pred cccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHH
Confidence 999998 55555443322 35689999999876 445667888999999999999999988 78899
Q ss_pred HHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHHHHHHHHHHHHHHh
Q 036539 617 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIVD---GVSGFHIDPYNGDESSDKIADFFEAC 692 (749)
Q Consensus 617 el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~-EiI~d---g~~G~lv~p~d~e~lA~aI~~~l~~l 692 (749)
++..++.. |.+.|..-..|.||+.++|+||+|+-.|+.+.||+. |||.+ ..+||+.+ +.++.|++|.+++.
T Consensus 349 ~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~-- 423 (465)
T KOG1387|consen 349 KLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK-- 423 (465)
T ss_pred HHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH--
Confidence 99999995 999999999999999999999999999999999974 56643 35899985 77889999988764
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 693 KVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 693 ~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|++.+..|+++||..+ .+|+-....+.+.+.+
T Consensus 424 -~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 424 -LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred -cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 68888999999999987 7888777776666543
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-16 Score=185.92 Aligned_cols=341 Identities=14% Similarity=0.122 Sum_probs=228.7
Q ss_pred HHcCCCceEEEEcCCCchHHHH-----HHHHc----------CCCcEEEEecCCcccc---cCCCc-------------c
Q 036539 362 EFLGGKPDLIIGNYSDGNLVAS-----VMASK----------LGITQATIAHALEKTK---YEDSD-------------V 410 (749)
Q Consensus 362 ~~l~~~pDIIh~h~~~~~lva~-----lla~~----------~gvp~v~t~H~l~~~k---~~~s~-------------~ 410 (749)
+.+..+||+||+|.+.++++.. ++... .+.+.++|.|++...- ++... +
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 4456689999999999988777 44321 1356799999984332 22111 1
Q ss_pred hhhhcCccc-cc----chhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEec
Q 036539 411 KWKELDPKY-HF----SCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAA 485 (749)
Q Consensus 411 ~~~~~~~~y-~f----~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIp 485 (749)
.+..+.... .+ ..++..-..++..|+.|.+||.-.-.-.++.+ .....|.+.-..+|.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf--------------~~~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMF--------------AGLWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHh--------------hhhhccCCcccCceecee
Confidence 111111000 00 12345567789999999999975422111111 011223333345688899
Q ss_pred CCCCCCCCC-CCchHHh-h--------------------------hhccchhhHHhhccccch---------------hh
Q 036539 486 PGADQSVYF-PYTEKQR-R--------------------------LTKFHPEIEELLYNKEDN---------------NE 522 (749)
Q Consensus 486 nGvD~~~f~-p~~~~~~-r--------------------------l~~~~~~~~~~l~~~~~~---------------~~ 522 (749)
|||+...+. |....-- + +.+.+....+.|...... -.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4321110 0 000000000111111000 00
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..+...+++.++|+++.|+..+|+.+.++..+.++.+. ...++||+.|.+.. .|....+.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 12333467888999999999999999999988877541 13599999999865 45555777888888888666
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP- 675 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p- 675 (749)
..++|.|+- ..+. .+.+.+-.++|++++||+ +|++|++-+=||.-|.+.+++--|...|-- ++.|||.|.+
T Consensus 545 ~~~kVvfle----~Yd~-~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DYDM-ALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CCCH-HHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 778999986 3444 555555557999999999 999999999999999999999999999987 7899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-HhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 676 -----------YNGDESSDKIADFFE-ACKV-----DPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 676 -----------~d~e~lA~aI~~~l~-~l~~-----dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.|++++-+.|.+.+. ...+ .|..|.+|.+++++.+...|||++++++|.+-
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 566777777765443 2333 38899999999999888899999999999874
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=176.46 Aligned_cols=250 Identities=13% Similarity=0.090 Sum_probs=160.7
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||++.+. ........+++.|+|++...|.. .|..... .. ....+.+|.+++++.
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~--------~~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG--------RA-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch--------HH-HHHHHHHhhheeCCc
Confidence 3489999987643 23322334566799987654421 1211000 01 113577899999886
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+. + ...|+ ++.++.|.+......+.... ..+++
T Consensus 144 ~~~~~-------~-------------~~~g~-----~~~~~G~p~~~~~~~~~~~~-------------------~~~~~ 179 (380)
T PRK00025 144 FEAAF-------Y-------------DKLGV-----PVTFVGHPLADAIPLLPDRA-------------------AARAR 179 (380)
T ss_pred cCHHH-------H-------------HhcCC-----CeEEECcCHHHhcccccChH-------------------HHHHH
Confidence 55441 1 01122 24555555433221111111 11244
Q ss_pred cCccCCCCCcEEEE-Ee-cccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CC
Q 036539 524 IGYLADRKKPIIFS-MA-RLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QL 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~-vG-RL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L 599 (749)
+|+ ++++++|+. .| |.... ++++.+++++..+.+..++++++++|+++. ..+++.+.++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 666 556666544 44 44444 457899999999987778899999987332 145566667666 55
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-----------------Ccccccc
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-----------------NQGGPAE 662 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-----------------~~GG~~E 662 (749)
. +.+.. +++..+|+ ++|++|++| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 54432 36889999 599999997 88989999999999987 5677778
Q ss_pred ccccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 663 IIVDGV--SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 663 iI~dg~--~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
++.++. .+++.+..|++.+++++.+ +++|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLP----LLADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 887764 5577788899999999965 4589999999999975554
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=175.65 Aligned_cols=267 Identities=16% Similarity=0.131 Sum_probs=174.3
Q ss_pred CCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|... ..+.+.++++..|+|++++.|+... +... ..|.. ......+.+|.++++|..
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~-~~~~~------------~r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRG-MPDEE------------NRHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCC-CCchH------------HHHHHHHHhhhccCCCHH
Confidence 389999999644 3566778888899999877665421 1000 01110 011245678999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+ +....|++ ..++.+++|++ |...+.+..... . ..++.
T Consensus 152 ~~~--------------------~l~~~G~~--~~kI~vign~v~d~~~~~~~~~~~-~----------------~~~~~ 192 (363)
T cd03786 152 ARR--------------------NLLQEGEP--PERIFVVGNTMIDALLRLLELAKK-E----------------LILEL 192 (363)
T ss_pred HHH--------------------HHHHcCCC--cccEEEECchHHHHHHHHHHhhcc-c----------------hhhhh
Confidence 765 11233665 78999999986 432221111000 0 00123
Q ss_pred cCccCCCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC-
Q 036539 524 IGYLADRKKPIIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL- 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L- 599 (749)
+++ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+.+++.+.++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 454 444556778899875 79999999999988653 466666666554 4677777888876
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCH
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~ 678 (749)
.++|+|+| .....++..+++ +||++|.||. | .+.|||++|+|||+++. +...+.+.+| .++.+. .|+
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~ 324 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDP 324 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCH
Confidence 67899998 555678999999 4999999984 4 47899999999999864 4456666544 233332 268
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
++++++|.++ ++++..+.+|. ...|.-...++++.+
T Consensus 325 ~~i~~~i~~l----l~~~~~~~~~~-------~~~~~~~~a~~~I~~ 360 (363)
T cd03786 325 EAILAAIEKL----LSDEFAYSLMS-------INPYGDGNASERIVE 360 (363)
T ss_pred HHHHHHHHHH----hcCchhhhcCC-------CCCCCCCHHHHHHHH
Confidence 9999999654 47887776653 234444444555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=186.14 Aligned_cols=320 Identities=13% Similarity=0.146 Sum_probs=210.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+..+ .=|+|-+|.....+++.++.++. ..++.+..|.. +|.+++... +. ....-+..|-
T Consensus 220 ~FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiP----FPs~Eifr~-LP-------~r~elL~glL 286 (934)
T PLN03064 220 MFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTP----FPSSEIHRT-LP-------SRSELLRSVL 286 (934)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCC----CCChHHHhh-CC-------cHHHHHHHHh
Confidence 34444444432 33899999999888888887764 57788899965 444432211 10 1112234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC--CceEEecCCCCCCCCCCCchH---Hhhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD--PKFNIAAPGADQSVYFPYTEK---QRRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~~---~~rl~~~~~ 508 (749)
.||.|=..|+..+..+....... -++-....++.... .++.+.|-|||.+.|...... ..+...
T Consensus 287 ~aDlIGFqT~~y~rhFl~~c~rl--------Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~--- 355 (934)
T PLN03064 287 AADLVGFHTYDYARHFVSACTRI--------LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKE--- 355 (934)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHH--------hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHH---
Confidence 89999999987766332211100 00000112232222 246678999999888643221 111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCe----EEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLV----NLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.+ .++++|++++|++..||+...++||.++.+.+|++ .|+-|..... ..-++..
T Consensus 356 -----------lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr---~~v~eY~ 416 (934)
T PLN03064 356 -----------LKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQ 416 (934)
T ss_pred -----------HHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC---CCcHHHH
Confidence 11222 35679999999999999999999999987777764 3443432221 1112323
Q ss_pred HHHHHHHHHHHHcC-CCCc-----EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC----cEEE
Q 036539 585 AEIKKMHALMEKYQ-LKGQ-----MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL----PTFA 654 (749)
Q Consensus 585 ~~~~~l~~li~~~~-L~~~-----V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl----PVVa 654 (749)
....++.+++.+.+ -.+. |.++. ..++.+++..+|+ .+||+++||..|||+|+..|||+|+. +.|.
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEE
Confidence 33344444444432 1122 44443 2578999999999 59999999999999999999999944 4444
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 655 TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 655 t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|..+|.++.+ +..+++|+|.|.+++|++|.+++. -+++.+++..++.++++ ..+||...++.+++-.
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 9999998888 446899999999999999987652 38889999999999998 7899999999977633
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.5e-15 Score=169.13 Aligned_cols=169 Identities=11% Similarity=0.127 Sum_probs=145.9
Q ss_pred CcEEEEEe--cccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC---------
Q 036539 532 KPIIFSMA--RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK--------- 600 (749)
Q Consensus 532 k~vIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~--------- 600 (749)
+..+++++ |+ +.|.++.+++++.+.....|++.|.+.|.+.. ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34677788 99 99999999999999999999999999998853 01235666677777665
Q ss_pred --------------------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 036539 601 --------------------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660 (749)
Q Consensus 601 --------------------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~ 660 (749)
.+|.|.| .....++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~g----y~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTT----LTNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEe----cCCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999 4445688999996 99999999999999 9999999999999 6678
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 661 ~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.++|.|++||+++ +|..+++++|..+| .++..|++++..+.+.+ ++||-+.+.+++.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 59999999996655 89999999999999998 899999999887764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=161.53 Aligned_cols=330 Identities=16% Similarity=0.145 Sum_probs=182.9
Q ss_pred CCceEEEEcCCCchHHHHHHHH-cCCCcEEEEecCCcccccC---CCcch-------hhhcCcccccchhhhHHHHHhhh
Q 036539 366 GKPDLIIGNYSDGNLVASVMAS-KLGITQATIAHALEKTKYE---DSDVK-------WKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H~l~~~k~~---~s~~~-------~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
...-+.|+|-|..+....++.+ ...|..|+|.|+.-...+. ..++| +......+....+...|+.+.+.
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 3455778999987554444433 3467789999986333221 11111 22222233444566778889999
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHH--
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEE-- 512 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~-- 512 (749)
||.+.|+|.-.+...+..++ ...=.|+|||+|.+.|....+.......-..+|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999876653222111 11124789999999887665433322222233333
Q ss_pred --hhccccchhhhcCccCCCCCcEEEEEeccc-CCCCHHHHHHHHHHhHcc----CCC---eEEEEEeccCCCCCCcchh
Q 036539 513 --LLYNKEDNNEHIGYLADRKKPIIFSMARLD-VVKNLTGLTEWYGKNKRL----RNL---VNLVIVGAFFDPSKSKDRE 582 (749)
Q Consensus 513 --~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~~~~d~e 582 (749)
.+++. +.+ .+.+..+|++.||.+ +.||+|.++||++++... ..+ +-|+|+=... .+.+.|
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve 348 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHH
Confidence 22222 122 123456788899998 699999999999998531 222 2344443221 111111
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 036539 583 ETA----------------------------------------------------------------------EIKKMHA 592 (749)
Q Consensus 583 e~~----------------------------------------------------------------------~~~~l~~ 592 (749)
... ..+.+..
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 111 1122333
Q ss_pred HHHHcCCCC------cEEEecC---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccc
Q 036539 593 LMEKYQLKG------QMRWIAA---QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 593 li~~~~L~~------~V~flG~---~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~Ei 663 (749)
.+.+.+|.+ +|.|++- ..+.+-+-+.+.++.. +|+.|+||+||++|.|-+|+.++|+|+|+|+..|....
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 333333321 3555551 2234445578888885 99999999999999999999999999999999997654
Q ss_pred ccc-----CceEEEE-C--CCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 664 IVD-----GVSGFHI-D--PYNGDESSDKIADFFEACK-VDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 664 I~d-----g~~G~lv-~--p~d~e~lA~aI~~~l~~l~-~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+.+ ...|+.| + -.+.++.++.|.+++.... .+...+..+.+++.+ ..+..+|+.....|.+.|..-
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~-LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAER-LSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHH-HGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHH
Confidence 432 3456544 2 3467788888877766644 455666666666654 458999999999999987754
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.7e-15 Score=140.28 Aligned_cols=130 Identities=23% Similarity=0.312 Sum_probs=96.3
Q ss_pred CcEEEEEecccCCCCHHHHHH-HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMARLDVVKNLTGLTE-WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
.++|+++|++.+.|+++.+++ ++.++.+..|+++|+|+|.+++ ++.++ ...+|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 611 DRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 489999995 999999986 67899999999999999999988 677777666678877 889999999997654
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-12 Score=136.56 Aligned_cols=389 Identities=14% Similarity=0.124 Sum_probs=232.1
Q ss_pred HHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHH
Q 036539 280 LLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359 (749)
Q Consensus 280 a~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~ 359 (749)
|..|++.|++|+ ++.-.-+. +.+.+-..++++|+.+|--+.... .++.-..+ +..|.. +...
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~----~p~~~~l~-lKvf~Q-fl~L 94 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQG----GPRVLFLP-LKVFWQ-FLSL 94 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCC----CchhhhhH-HHHHHH-HHHH
Confidence 346899999999 65533111 233444455778887765443211 11111111 011111 1111
Q ss_pred HHHH-cCCCceEEEEcCCCc---hHHHHHHHHcCCCcEEEEecCCccc-ccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 360 ILEF-LGGKPDLIIGNYSDG---NLVASVMASKLGITQATIAHALEKT-KYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 360 l~~~-l~~~pDIIh~h~~~~---~lva~lla~~~gvp~v~t~H~l~~~-k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
+.+. ..+.+|+|....+.+ -.++.+.+...|.+++...|++..+ ... ......... ..+....|...-+.
T Consensus 95 l~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~---~~~g~~h~l--V~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 95 LWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLK---LKLGFQHPL--VRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHH---hhcCCCCch--HHHHHHHHHHhhcc
Confidence 1111 146899999887765 4567777778899999999987543 100 000000110 11222345666678
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhh
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELL 514 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l 514 (749)
||.-.|+|..+.+...+.+|--.....+..|-- ++.++-...=-..+-+-|...|...... .+..+.-.
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps----~~~~l~~~H~lf~~l~~d~~~f~ar~~q-------~~~~~~ta 238 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS----KPTPLDEQHELFMKLAGDHSPFRAREPQ-------DKALERTA 238 (444)
T ss_pred cccchhhHHHHHHHHHHhcCCceeEEEecCCCC----CCCchhHHHHHHhhhccccchhhhcccc-------cchhhhhh
Confidence 999999999888766666653222211111110 0000000000001111121112111000 01111112
Q ss_pred ccccch-hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH-----c--cCCCeEEEEEeccCCCCCCcchhHHHH
Q 036539 515 YNKEDN-NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK-----R--LRNLVNLVIVGAFFDPSKSKDREETAE 586 (749)
Q Consensus 515 ~~~~~~-~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----~--~~~~v~LvIVG~g~~~~~~~d~ee~~~ 586 (749)
|..-.. .... ..+....++++....++..++..|++|+.... + ..|..-.+|.|.||.
T Consensus 239 f~~k~~s~~v~--~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl------------ 304 (444)
T KOG2941|consen 239 FTKKDASGDVQ--LLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL------------ 304 (444)
T ss_pred Hhhhcccchhh--hccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch------------
Confidence 211111 0001 11233446777778999999999999998432 1 236677888888888
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccccc
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~Ei 663 (749)
.+++.+.++++++ .+|.+.- .+...++...+++ ++|..|+--. .=..|++++....||+||+|-+..-+.|+
T Consensus 305 kE~Y~~~I~~~~~-~~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 305 KEKYSQEIHEKNL-QHVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred hHHHHHHHHHhcc-cceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 7788889999887 4566654 3777888899998 5998876432 23489999999999999999999999999
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 664 I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|.|++||++|+ |.+++|+.+.-.+...-+|.+..+++.+++++. +.+.|+..-++...
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 99999999998 999999999888766667999999999999887 56777766555543
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-12 Score=142.70 Aligned_cols=249 Identities=14% Similarity=0.090 Sum_probs=153.0
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+|++....+ ++.....++.+|+|++..+. .+ -..|... ..+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~-------~waw~~~-----------~~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ-------VWAWRKW-----------RAKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc-------HhhcCcc-----------hHHHHHHHHhHhhccCCC
Confidence 4899999887543 55555678889999874331 11 1122211 123456789999999876
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC-CchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP-YTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p-~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
+.+- | . .+| .+..++.|++-...... ..... .++.
T Consensus 149 e~~~-------~------------~-~~g-----~~~~~vGnPv~~~~~~~~~~~~~-------------------~r~~ 184 (385)
T TIGR00215 149 EKAF-------Y------------Q-KKN-----VPCRFVGHPLLDAIPLYKPDRKS-------------------AREK 184 (385)
T ss_pred cHHH-------H------------H-hcC-----CCEEEECCchhhhccccCCCHHH-------------------HHHH
Confidence 6541 1 1 112 24556777663322110 11111 1244
Q ss_pred cCccCCCCCcEEEEEe--cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 524 IGYLADRKKPIIFSMA--RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vG--RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.++.+.++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 676 66778877663 7777 7899999999999987778888877654422 134455666666666
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc-----------------cccc
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-----------------PAEI 663 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG-----------------~~Ei 663 (749)
.+|.+.+ . +...+|+ ++|++|++| |.+.+|||+||+|+|.+.-.. .+.+
T Consensus 252 ~~v~~~~----~----~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLID----G----DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEEC----c----hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 6677664 1 4567888 599999999 888889999999999972111 2222
Q ss_pred cccCceEE-EE-CCCCHHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHH
Q 036539 664 IVDGVSGF-HI-DPYNGDESSDKIADFFEACKVDP----TYWNKFSTEGLK 708 (749)
Q Consensus 664 I~dg~~G~-lv-~p~d~e~lA~aI~~~l~~l~~dp----~~~~~ms~~a~~ 708 (749)
+.+....- ++ +.-+++.+++.+.+ ++.|+ +.++++.+.-.+
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~----ll~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLL----LLENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHH----HhcCCcccHHHHHHHHHHHHH
Confidence 32221111 11 22357778877754 55888 888777655443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=113.69 Aligned_cols=92 Identities=23% Similarity=0.404 Sum_probs=84.9
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 628 AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 628 vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+++.|+...+++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|. .+++||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~----~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE----YLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH----HHHCCHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999998 9999999995 45589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLN 725 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ 725 (749)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-10 Score=131.01 Aligned_cols=321 Identities=15% Similarity=0.127 Sum_probs=178.9
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
.+..+.... ..-|+|-.|+....+++.++.++. ..++.+..|.. +|.++.. +.+ -....-...|-.
T Consensus 131 FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~e~f-r~l-------P~r~eiL~glL~ 197 (474)
T PF00982_consen 131 FADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIP----FPSSEIF-RCL-------PWREEILRGLLG 197 (474)
T ss_dssp HHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHHH-TTS-------TTHHHHHHHHTT
T ss_pred HHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecC----CCCHHHH-hhC-------CcHHHHHHHhhc
Confidence 333444433 366899999999888888887765 57788899965 3333221 111 011112336788
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhc-cCCCCC--CceEEecCCCCCCCCCCCchH---Hhhhhccch
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVK-GIDVLD--PKFNIAAPGADQSVYFPYTEK---QRRLTKFHP 508 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~-Gi~~~~--~ki~VIpnGvD~~~f~p~~~~---~~rl~~~~~ 508 (749)
||.|-..|+..+..+.......- +.-+.... ++.+.. .++.+.|-|||.+.+...... ..+...
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~l-------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~--- 267 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLL-------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEE--- 267 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS--------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHH---
T ss_pred CCEEEEecHHHHHHHHHHHHHHc-------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHH---
Confidence 99999999877663322211110 00000000 121112 257778999998876432111 111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.++ .+.++|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... +...+..
T Consensus 268 -----------l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~ 329 (474)
T PF00982_consen 268 -----------LREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQ 329 (474)
T ss_dssp -----------HHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHH
T ss_pred -----------HHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHH
Confidence 111121 224899999999999999999999999876555 577887776433 3334444
Q ss_pred HHHHHHHHHHHH----cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEE
Q 036539 585 AEIKKMHALMEK----YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFA 654 (749)
Q Consensus 585 ~~~~~l~~li~~----~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVa 654 (749)
+..+++.+++.+ +|-.+ -|.++. ..++.+++..+|+ .||+++.+|..+|.-|+..|+.+|-.+ +|.
T Consensus 330 ~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiL 405 (474)
T PF00982_consen 330 ELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLIL 405 (474)
T ss_dssp HHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEEE
T ss_pred HHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceEe
Confidence 455555555554 34322 255554 2678999999999 599999999999999999999999765 777
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 655 TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 655 t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|...|.++.+.+ ..++|+|.|.+++|++|.++++ -.++.++..-+.-++.+ ..+|-...++.+++-.
T Consensus 406 SefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 406 SEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp ETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred eccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 889999888855 3489999999999999987763 46666766667777777 7888888888887643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.2e-10 Score=125.41 Aligned_cols=324 Identities=14% Similarity=0.090 Sum_probs=209.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .-|+|-.|.....+++..+.++ ...++.+..|.. +|.+++.. .+.. ...-...|-
T Consensus 112 ~FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~LP~-------r~eil~glL 178 (474)
T PRK10117 112 LLADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-ALPP-------HDELLEQLC 178 (474)
T ss_pred HHHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hCCC-------hHHHHHHHH
Confidence 33444444432 3489999999988888887765 346788888964 44443221 1110 011233678
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHH--hhhhccchh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQ--RRLTKFHPE 509 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~--~rl~~~~~~ 509 (749)
.+|.|=..|...+..+.+.+...-... ...+ ..+... ..++.+.|-|||.+.|....... .+..
T Consensus 179 ~aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~-----~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~----- 246 (474)
T PRK10117 179 DYDLLGFQTENDRLAFLDCLSNLTRVT--TRSG-----KSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLA----- 246 (474)
T ss_pred hCccceeCCHHHHHHHHHHHHHHcCCc--ccCC-----CeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHH-----
Confidence 899998888877653332211110000 0000 001100 22577899999988774322211 1110
Q ss_pred hHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHH
Q 036539 510 IEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETA 585 (749)
Q Consensus 510 ~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~ 585 (749)
..++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++.. ..+.-++..+
T Consensus 247 ---------~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~ 309 (474)
T PRK10117 247 ---------QLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQD 309 (474)
T ss_pred ---------HHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHH
Confidence 011122 356799999999999999999999999877665 4677777643 2233344444
Q ss_pred HHHHHHHHHHHcC-CCCcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 036539 586 EIKKMHALMEKYQ-LKGQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-----PTFATNQ 657 (749)
Q Consensus 586 ~~~~l~~li~~~~-L~~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-----PVVat~~ 657 (749)
...++.+++.+.+ -.+.+.|.+ +....++.+++..+|+ +|||++.++..+|+-|+..|+.+|-. +.|-|..
T Consensus 310 l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 310 IRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 5555666655532 122222222 2224678999999999 59999999999999999999999965 3777999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
.|.++.+. ..++++|.|.+++|++|.+++. -.++.+++--+..++.+ .++|....++.+++-..
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 99888884 3789999999999999987763 46666666666667777 78899998888887543
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-11 Score=116.13 Aligned_cols=169 Identities=17% Similarity=0.157 Sum_probs=84.1
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccc
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHR 338 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~ 338 (749)
+..||.+.|+. +|+++|+++||+|+ |++....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 45799999999 77777899999999 8887644432110 0011111111110
Q ss_pred cccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcc
Q 036539 339 WVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPK 418 (749)
Q Consensus 339 ~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~ 418 (749)
....+.......+.+.+.+. +|||||+|.+.....+.+... ++|.+.+.|+...... .+......
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~-----~~~~~~~~ 124 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERR-----FLKSKLSP 124 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HH-----TTTTSCCC
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccccc-----ccccccch
Confidence 00111122233344444443 899999998665444444333 9999999998742100 00000000
Q ss_pred cccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCC
Q 036539 419 YHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYF 494 (749)
Q Consensus 419 y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~ 494 (749)
+..... .......+.+|.+|++|...++.. .. .|++ ..|+.|||||||.+.|.
T Consensus 125 ~~~~~~-~~~~~~~~~~~~ii~vS~~~~~~l-------------------~~-~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 125 YSYLNF-RIERKLYKKADRIIAVSESTKDEL-------------------IK-FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHH-CTTHHHHCCSSEEEESSHHHHHHH-------------------HH-HT----SS-EEE----B-CCCH-
T ss_pred hhhhhh-hhhhhHHhcCCEEEEECHHHHHHH-------------------HH-hCCc--ccCCEEEECCccHHHcC
Confidence 000000 112234688999999999887721 11 3555 78999999999998873
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.4e-11 Score=115.85 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=84.6
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccccc
Q 036539 262 GGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVS 341 (749)
Q Consensus 262 GG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~is 341 (749)
||.+.|+. +|+++|.++||+|+ |+|+..++.. . + ....++.+.++|+.....
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~-~--~~~~~~~~~~~~~~~~~~------- 52 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------D-E--EEEDGVRVHRLPLPRRPW------- 52 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG--------S--EEETTEEEEEE--S-SSS-------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------c-c--cccCCceEEeccCCccch-------
Confidence 79999999 77778899999999 9986643321 0 1 112357888888665321
Q ss_pred ccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCccccc
Q 036539 342 RFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHF 421 (749)
Q Consensus 342 r~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f 421 (749)
....+ .+...+.+.+ .....+||+||+|++..++++.++++..++|+|.+.|+..... ...|..
T Consensus 53 ~~~~~----~~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~~------- 116 (160)
T PF13579_consen 53 PLRLL----RFLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR----GSRWKR------- 116 (160)
T ss_dssp GGGHC----CHHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-------
T ss_pred hhhhH----HHHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh----ccchhh-------
Confidence 01111 1222222222 2236799999999976667777777678999999999753211 011111
Q ss_pred chhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC
Q 036539 422 SCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG 487 (749)
Q Consensus 422 ~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG 487 (749)
......++..++.||.|+++|...++. . ...|++ ..|+.|||||
T Consensus 117 ~~~~~~~~~~~~~ad~vi~~S~~~~~~-------------------l-~~~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 117 RLYRWLERRLLRRADRVIVVSEAMRRY-------------------L-RRYGVP--PDRIHVIPNG 160 (160)
T ss_dssp HHHHHHHHHHHHH-SEEEESSHHHHHH-------------------H-HHH-----GGGEEE----
T ss_pred HHHHHHHHHHHhcCCEEEECCHHHHHH-------------------H-HHhCCC--CCcEEEeCcC
Confidence 011133667899999999999988771 1 124555 7899999998
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-08 Score=110.74 Aligned_cols=251 Identities=14% Similarity=0.129 Sum_probs=152.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+|.+........+.++++.+|+|++..-.+.-. ... .++..+.|+.|.+.-..
T Consensus 90 ~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~a----------------nk~~~~~a~~V~~~f~~- 146 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLA----------------NKILSKFAKKVASAFPK- 146 (357)
T ss_pred cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chh----------------HHHhHHhhceeeecccc-
Confidence 4999999988877778888889999998765444311 112 23345566666443321
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.. .+.+ +.++.++.|.+..+... ......+. .+
T Consensus 147 ~~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~~ 179 (357)
T COG0707 147 LE------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------DG 179 (357)
T ss_pred cc------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------hc
Confidence 11 1222 45677788877766554 22222111 11
Q ss_pred ccCCCCCcEEEEEec-ccCCCCHHHHH-HHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 526 YLADRKKPIIFSMAR-LDVVKNLTGLT-EWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 526 ~l~~~~k~vIl~vGR-L~~~Kgl~~Li-eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
..++++|+.+|- ....+ +..++ ++...+.+ +++++...+... .+++...-.+++. +
T Consensus 180 ---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 180 ---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV---V 237 (357)
T ss_pred ---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---E
Confidence 126777777764 43333 43333 33334433 567766665543 3455555555443 7
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDP 675 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p 675 (749)
+..++.. ++.++|+ ++|++|+=+ =++|+.|..++|+|+|--..+.. +..+++...|..++-
T Consensus 238 ~v~~f~~------dm~~~~~-~ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFID------DMAALLA-AADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHHh------hHHHHHH-hccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 7777533 6999999 499998865 36899999999999998644433 334455556777764
Q ss_pred CC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 676 YN--GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 676 ~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
.+ ++.+++.|.+ +.++|+..++|++++++.. ..=.-+.+++.++
T Consensus 307 ~~lt~~~l~~~i~~----l~~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 307 SELTPEKLAELILR----LLSNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred ccCCHHHHHHHHHH----HhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 44 6677777754 5589999999999988764 2333333444433
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=6e-09 Score=114.98 Aligned_cols=248 Identities=15% Similarity=0.089 Sum_probs=139.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
+.+||+||++....+..+.++++.+++|++. |.-.... -.+.++....+|.|+++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i--~e~n~~~--------------------g~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLL--HESDMTP--------------------GLANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEE--ECCCCCc--------------------cHHHHHHHHhhCEEEEEccc
Confidence 4599999998777777778899999999754 4221000 02245677888988664322
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
... +++ ..|+.++-|-|..+...+.... .++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~--------------------~~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREK--------------------GLAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchH--------------------HHHhc
Confidence 111 122 3566677676655443221111 11335
Q ss_pred CccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
|+ ++++++|+.+|-=--.+.+.. +.+++..+. .+++++++-+..+ .++. ...+ .++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~------------~~~~---~~~~---~~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN------------LDDS---LQNK---EGY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch------------HHHH---Hhhc---CCc
Confidence 55 566777777754322344533 334454443 2466666544322 1111 1111 133
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-----c----cccccccCceEEEEC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-----G----PAEIIVDGVSGFHID 674 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-----G----~~EiI~dg~~G~lv~ 674 (749)
...++. .+++..+|+ +||++|.=+ -+.|+.|++++|+|.|.-... + ..+.+.+...|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~-~adlvIsr~----G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILA-ITDFVISRA----GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHH-hCCEEEECC----ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 344532 246888898 599988764 478999999999999987432 1 223444445666664
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 675 PY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 675 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.. +++.+++++. .+++|++.+++ + .+++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~----~ll~~~~~~~~---~-----~~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVE----ELSHNNEKYKT---A-----LKKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHH----HHHcCHHHHHH---H-----HHHcCCCCHHHHHHHH
Confidence 33 4567777774 45578766532 1 2345555666665554
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.4e-09 Score=118.13 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=206.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .=|+|..|.....+++.++..+. ..++.+..|.. +|.+++.-- .-+...-.-.+-
T Consensus 136 ~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiP----fPssEvfr~--------lP~r~eIl~gll 202 (486)
T COG0380 136 KFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIP----FPSSEVFRC--------LPWREEILEGLL 202 (486)
T ss_pred HHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCC----CCCHHHHhh--------CchHHHHHHHhh
Confidence 34444555443 23999999999888888887765 35678888865 333332210 001111223677
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhh-ccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVV-KGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~-~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.||.|-..++..+..+...+.+... ++ +.-.+. .|.+-...++...|-|+|...|........... .+.+
T Consensus 203 ~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~----~~~e 273 (486)
T COG0380 203 GADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQE----KVLE 273 (486)
T ss_pred cCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhh----HHHH
Confidence 8999998888776643332221110 00 000000 011101235667899999877653321111000 0000
Q ss_pred hhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETAEIK 588 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 588 (749)
.++.+ ..++.+|+.+.|+|..||+..=+.||.++...+| ++.|+-++.... ..-++......
T Consensus 274 -------l~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~ 339 (486)
T COG0380 274 -------LKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRL 339 (486)
T ss_pred -------HHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHH
Confidence 01111 2348899999999999999999999999987665 466777776644 22223233445
Q ss_pred HHHHHHHHc-CCCCcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcC----CcEEEcCccccc
Q 036539 589 KMHALMEKY-QLKGQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG----LPTFATNQGGPA 661 (749)
Q Consensus 589 ~l~~li~~~-~L~~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~G----lPVVat~~GG~~ 661 (749)
++.+++.+. +..+++.|.+ +....++..++..+++ .+|+++..+.-+|+-++..|+.+|- -|.|-|...|.+
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 555555443 2233433322 1223578999999999 5999999999999999999999983 477888888888
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
..+.+ .++++|.|.+++|++|.+++. -.++.+++.-+.-++.+ .++|-...+..+++-.
T Consensus 419 ~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 419 SELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred hhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 77754 789999999999999987663 46666666556666666 7788888888876643
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.9e-09 Score=126.83 Aligned_cols=325 Identities=11% Similarity=0.085 Sum_probs=207.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.......-|+|-.|.....+++.++.++. ..++.+..|.. +|.++++.... ....-+..|-
T Consensus 189 ~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~eifr~LP--------~r~eiL~glL 256 (854)
T PLN02205 189 IFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP----FPSSEIYKTLP--------IREELLRALL 256 (854)
T ss_pred HHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCC----CCChHHHhhCC--------cHHHHHHHHh
Confidence 34444444432223899999999888888887754 57888899965 44444321110 1112234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC--CceEEecCCCCCCCCCCCch---HHhhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD--PKFNIAAPGADQSVYFPYTE---KQRRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~---~~~rl~~~~~ 508 (749)
.||.|=..|+..+..+.....+.-.. ..... +...|+.+.. -++.+.|-|||++.|..... ...+...
T Consensus 257 ~aDlIGFht~~yar~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~--- 329 (854)
T PLN02205 257 NSDLIGFHTFDYARHFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKE--- 329 (854)
T ss_pred cCCeEEecCHHHHHHHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHH---
Confidence 89999999987776433321111000 00000 0001222222 25778999999887743221 1111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+..... +.-++..
T Consensus 330 -----------l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr---~~~~~y~ 392 (854)
T PLN02205 330 -----------LIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR---GKGKDVK 392 (854)
T ss_pred -----------HHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cccHHHH
Confidence 112222 24678999999999999999999999999877765 46776665433 2223334
Q ss_pred HHHHHHHHHHHHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC--------
Q 036539 585 AEIKKMHALMEKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-------- 650 (749)
Q Consensus 585 ~~~~~l~~li~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-------- 650 (749)
+...++.+++.+. |-.+ -|.++- ..++..++..+|+ +|||++.++..+|+-|+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~ 468 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKL 468 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccc
Confidence 4444555555543 3221 355554 3678999999999 59999999999999999999999854
Q ss_pred -----------cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 651 -----------PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 651 -----------PVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
..|.|...|.+..+. ..++|+|.|.+++|++|.+++. -.++.++.--+.-++++ .++|-...
T Consensus 469 ~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W 541 (854)
T PLN02205 469 LGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYW 541 (854)
T ss_pred cccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHH
Confidence 366788888777773 3689999999999999987763 45555555555666666 77888888
Q ss_pred HHHHHHH
Q 036539 720 ANKMLNM 726 (749)
Q Consensus 720 a~~ll~l 726 (749)
++.++.-
T Consensus 542 ~~~fl~~ 548 (854)
T PLN02205 542 ARSFLQD 548 (854)
T ss_pred HHHHHHH
Confidence 8877653
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-08 Score=115.04 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=109.2
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
.-+++++. +..++++.++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|+.
T Consensus 283 ~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~--- 337 (438)
T TIGR02919 283 KQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNIT--- 337 (438)
T ss_pred ccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcC---
Confidence 34666661 999999999999999999999 66544 12567777 666 4556666533
Q ss_pred CChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 613 LRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 613 ~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
...+-.++.+ ||+++..|..|+|++++.|||+.|+|+|+.+. -|+.+++.+ |.+++.+|+++|+++|.+.
T Consensus 338 --~~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~l--- 408 (438)
T TIGR02919 338 --TQKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDL--- 408 (438)
T ss_pred --hHHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHH---
Confidence 3357777775 99999999999999999999999999999754 467788866 8899999999999999665
Q ss_pred hcCCHHHHHHHHHHHHH
Q 036539 692 CKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 692 l~~dp~~~~~ms~~a~~ 708 (749)
++||+.+++.-..-++
T Consensus 409 -L~d~~~~~~~~~~q~~ 424 (438)
T TIGR02919 409 -LNDPNQFRELLEQQRE 424 (438)
T ss_pred -hcCHHHHHHHHHHHHH
Confidence 4899877664433333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-08 Score=108.81 Aligned_cols=124 Identities=15% Similarity=0.094 Sum_probs=79.6
Q ss_pred CCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 529 DRKKPIIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+.+++++++.|.... .+-...+++++..+ +.+++ .+|.... .. ..+.++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~-------------~~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL-------------GA-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc-------------cc-------cCCCCceE
Confidence 345567788888754 23344555666543 34544 4444332 00 24567899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NG 678 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~ 678 (749)
+.+ +++..++ +. .+|++|.-. | ..|+.||+++|+|+|.....+ .++.++....|..+++. ++
T Consensus 292 ~~~----~~p~~~l---l~-~~d~~I~hg---G-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVD----FVPHDWL---LP-RCAAVVHHG---G-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeC----CCCHHHH---hh-hhheeeecC---C-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 998 5666555 44 599999653 2 479999999999999986655 34455555678777665 57
Q ss_pred HHHHHHHHHHH
Q 036539 679 DESSDKIADFF 689 (749)
Q Consensus 679 e~lA~aI~~~l 689 (749)
+++++++.+.+
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 78888885543
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=112.69 Aligned_cols=183 Identities=16% Similarity=0.124 Sum_probs=101.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc-CCcccccc-
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC-NQELEPIE- 317 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~-~~~~e~i~- 317 (749)
||++||....|- -.+||...++. .|+++|+++||+|. |+++.+........ ...+....
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999888652 37899999988 66777899999999 99988633211100 00000000
Q ss_pred ---C----------------ccceEEEEecCccCCcccccccccccccc--------chHHHH--HHHHHHHHHHcCCCc
Q 036539 318 ---G----------------TKHSNILRVPFKTDKGILHRWVSRFDVYP--------YLEGFA--QDATTMILEFLGGKP 368 (749)
Q Consensus 318 ---~----------------~~~~~I~rvp~~~~~~~~~~~isr~~i~p--------yl~~f~--~~~~~~l~~~l~~~p 368 (749)
+ ..++.++-+... .+.+|..++. ..++|+ ..++.++.+.+..+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 012333322211 1122333431 112322 233344444445699
Q ss_pred eEEEEcCCCchHHHHHHHHcC-------CCcEEEEecCCcccc-cCCC-----cchhhh--cCcccccchhhhHHHHHhh
Q 036539 369 DLIIGNYSDGNLVASVMASKL-------GITQATIAHALEKTK-YEDS-----DVKWKE--LDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 369 DIIh~h~~~~~lva~lla~~~-------gvp~v~t~H~l~~~k-~~~s-----~~~~~~--~~~~y~f~~~~~~e~~a~~ 433 (749)
||||+|.|.+++++.+++... ++|+|+|+|++.... ++.. .+.+.. ....+.+.......+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999988865 599999999975432 1111 112211 1222333445555668899
Q ss_pred hCCEEEeCCHHHHhh
Q 036539 434 ATDFIIASTFQEIAG 448 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~ 448 (749)
.||.|+|+|+..+..
T Consensus 215 ~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 215 YADKVTTVSPTYARE 229 (245)
T ss_dssp HSSEEEESSHHHHHH
T ss_pred hcCEeeeCCHHHHHH
Confidence 999999999988774
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-06 Score=97.81 Aligned_cols=112 Identities=20% Similarity=0.229 Sum_probs=74.5
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEEC
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHID 674 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~ 674 (749)
+.++|.+.+ +++..+ +++ .+|++|..+- . .|+.||+++|+|+|+....+ ..+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hgG---~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHGG---M-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECCC---c-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898888 555544 455 5999998753 2 48999999999999965443 234455556787776
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 675 PY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 675 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.. ++++++++|.+ ++.|+++++++.+- .+.+...-.-+..++.++++.
T Consensus 341 ~~~~~~~~l~~ai~~----~l~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 341 PEEVTAEKLREAVLA----VLSDPRYAERLRKM-RAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cccCCHHHHHHHHHH----HhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence 43 46778888854 45888877666443 333445556666776666543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.85 E-value=8e-07 Score=99.73 Aligned_cols=166 Identities=15% Similarity=0.188 Sum_probs=105.5
Q ss_pred CCCcEEEEE-e-ccc-CCCCHHHHHHHHHHhHccCCCeEEEEEe-ccCCCCCCcchhHHHHHHHHHHHHHHcCCC-----
Q 036539 530 RKKPIIFSM-A-RLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVG-AFFDPSKSKDREETAEIKKMHALMEKYQLK----- 600 (749)
Q Consensus 530 ~~k~vIl~v-G-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~L~----- 600 (749)
+++++|+.+ | |-. -.+++..+++++..+.+. +++.+++.- ++.. .+.+.+..++.+..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~ 269 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSS 269 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCc
Confidence 344454444 4 322 367888999999999765 678877665 3433 34455555544442
Q ss_pred ---------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc---cccccc--
Q 036539 601 ---------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP---AEIIVD-- 666 (749)
Q Consensus 601 ---------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~---~EiI~d-- 666 (749)
+++.+..+ ..+++.+|+ +||++|..| |.+..|++++|+|+|.....+. ..+.+.
T Consensus 270 ~~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~ 337 (396)
T TIGR03492 270 EDQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS 337 (396)
T ss_pred cccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH
Confidence 12455442 346888998 599999996 5666999999999999864433 122222
Q ss_pred ---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 667 ---GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 667 ---g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+ .++.+...+++.+++++.+ +++|++.+++|.++++++..+...-+.+++.+.+
T Consensus 338 ~l~g-~~~~l~~~~~~~l~~~l~~----ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 338 RLLG-GSVFLASKNPEQAAQVVRQ----LLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hhcC-CEEecCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3 3445555678888888854 4589999988886665554344555555554443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.1e-08 Score=96.08 Aligned_cols=177 Identities=21% Similarity=0.202 Sum_probs=114.8
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIE 317 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~ 317 (749)
|.||+|+...|.|. .-||.|..+. +|+.+|+++||+|+ |.|+...... .. .
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~~---~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------KE---F 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------CC---c
Confidence 35899999999985 4699999999 88889999999999 9988632211 11 1
Q ss_pred CccceEEEEecCccCCccccccccccccccchHHHHHHHHH--HHH---HHcCCCceEEEEcCCC-chHHHHHHHH--cC
Q 036539 318 GTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATT--MIL---EFLGGKPDLIIGNYSD-GNLVASVMAS--KL 389 (749)
Q Consensus 318 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~--~l~---~~l~~~pDIIh~h~~~-~~lva~lla~--~~ 389 (749)
...+++++.+|.....+ +.++.-++.. ..+ +.-+.+.||||.+... ++.+..++.+ +.
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 22368899998664321 1122112111 111 1112357899987766 5555555543 35
Q ss_pred CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchh
Q 036539 390 GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR 469 (749)
Q Consensus 390 gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~ 469 (749)
|.|+++..|+++.. +.+|..+.+.|. ...|+++.+.||.+|+-|....+-..+.
T Consensus 118 g~~v~vN~DGlEWk-----R~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~----------------- 171 (185)
T PF09314_consen 118 GGKVVVNMDGLEWK-----RAKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER----------------- 171 (185)
T ss_pred CCcEEECCCcchhh-----hhhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-----------------
Confidence 77999999998642 335655544432 2468889999999999998776622111
Q ss_pred hhccCCCCCCceEEecCCCC
Q 036539 470 VVKGIDVLDPKFNIAAPGAD 489 (749)
Q Consensus 470 v~~Gi~~~~~ki~VIpnGvD 489 (749)
++ ..+..+||+|.|
T Consensus 172 --y~----~~~s~~IaYGad 185 (185)
T PF09314_consen 172 --YG----RKKSTFIAYGAD 185 (185)
T ss_pred --cC----CCCcEEecCCCC
Confidence 11 367889999987
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-06 Score=94.17 Aligned_cols=268 Identities=17% Similarity=0.206 Sum_probs=149.5
Q ss_pred CCceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+|.++.. ...+.++++|..+++|+++..-++ .+. + ..+. ..-...-+.|+...+.+..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-rs~----~----~~eE--------~~r~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-VTE----G----AIDE--------SIRHAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc-cCC----C----CchH--------HHHHHHHHHHhhccCCCHH
Confidence 48999999874 457888999999999987543322 111 0 0011 0011233456777777766
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEe-cCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIA-APGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VI-pnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+. ...-|++ ..++.++ .+++|.-........ ....+.
T Consensus 155 ~~~~--------------------L~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~------------------~~~~~~ 194 (365)
T TIGR03568 155 YRQR--------------------VIQMGED--PDRVFNVGSPGLDNILSLDLLSK------------------EELEEK 194 (365)
T ss_pred HHHH--------------------HHHcCCC--CCcEEEECCcHHHHHHhhhccCH------------------HHHHHH
Confidence 5441 1122444 5566666 445554322111111 112234
Q ss_pred cCccCCCCCcE-EEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 524 IGYLADRKKPI-IFSMARLD--VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k~v-Il~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+|+ +.++++ ++.+-|-. .....+.+.+.+..+.+...++ +++....++ .+....+.+.++... .
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p------~~~~i~~~i~~~~~~---~ 261 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADA------GSRIINEAIEEYVNE---H 261 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCC------CchHHHHHHHHHhcC---C
Confidence 565 333344 44554433 3333344444444443332234 444322110 011112233333211 3
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
++|.+++ .++..++..+++. |+++|.-|. | .+.||.++|+|||+ .|.-.|.+..|.+++++ +.|+++
T Consensus 262 ~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~ 328 (365)
T TIGR03568 262 PNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKEE 328 (365)
T ss_pred CCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHHH
Confidence 6799999 8889999999995 999886541 2 34899999999995 45688888888888878 568999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
+.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 329 I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 329 IVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 98888652 244433332 2223457677777776653
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-06 Score=94.63 Aligned_cols=116 Identities=13% Similarity=0.142 Sum_probs=79.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------~--------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------D--------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------c--------ccCCCEEEeecC
Confidence 345688999987665 666776664 4678988876632 0 015789988633
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGL-TVIEAMNCGLPTFATNQGGPAE------IIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGL-tvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~lv~p~--d~e~ 680 (749)
..++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+..| .++....|..+++. +++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3588999995 99999874 54 4999999999999977655433 33444566666543 4677
Q ss_pred HHHHHH
Q 036539 681 SSDKIA 686 (749)
Q Consensus 681 lA~aI~ 686 (749)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777663
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-05 Score=87.64 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=121.6
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC----------
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG---------- 601 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~---------- 601 (749)
+++++..+. ...--+.+++++..+++++|++.+++|=-.++ -.+.+.+++++.|+.-
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~~~~~~ 297 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQGDPPF 297 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecCCCCCC
Confidence 778888876 33334558899999999999999999877665 3677888888887731
Q ss_pred --cEEEecCccCcCChHHHHHHHHccCcE-EEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEEC
Q 036539 602 --QMRWIAAQSDRLRNGELYRCIADTKGA-FVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDGVSGFHID 674 (749)
Q Consensus 602 --~V~flG~~~~~~~~~el~~~la~aadv-fV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg~~G~lv~ 674 (749)
.=.++| ...+|+..+|. .+|+ ||-=|+.+-=|--++|+.++|+|||... ..-..+-+...+.|+.++
T Consensus 298 ~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~ 371 (419)
T COG1519 298 SDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE 371 (419)
T ss_pred CCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC
Confidence 112333 24679999999 5877 5556776666788999999999999953 333344444555788887
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|.+.+++++ +.+.+|++.+++|++++...+.++- ...+++++..+.
T Consensus 372 --~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~~---gal~r~l~~l~~ 417 (419)
T COG1519 372 --DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQNR---GALARTLEALKP 417 (419)
T ss_pred --CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHhh---HHHHHHHHHhhh
Confidence 566666666 5567889999999999999985542 255555555443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-06 Score=82.11 Aligned_cols=123 Identities=20% Similarity=0.228 Sum_probs=76.2
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDAT 357 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~ 357 (749)
.+++.|+++|++|+ ++|..... +......++.+.+++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66777899999999 88874221 1111123577777764321 1333432 21 333
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCC-CcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhC
Q 036539 358 TMILEFLGGKPDLIIGNYSDG-NLVASVMASKLG-ITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNAT 435 (749)
Q Consensus 358 ~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~g-vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~a 435 (749)
+.+. +.+|||||+|...+ ++++.++++..+ +|++.+.|+..... .+. .. .+ .....+.+++.+
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~-------~~--~~~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KK-------KL--KKFIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hH-------HH--HHHHHHHHHHhC
Confidence 3333 34899999999886 788888888888 99999999863311 110 00 00 112345688999
Q ss_pred CEEEeCC
Q 036539 436 DFIIAST 442 (749)
Q Consensus 436 D~IIt~S 442 (749)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.7e-05 Score=84.78 Aligned_cols=271 Identities=16% Similarity=0.164 Sum_probs=142.4
Q ss_pred CceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+|..+.-.. .+.++++|..+++|++..--++..... .-...+... -...-+-||.-++.|...
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~-----~~g~~de~~--------R~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR-----TEGMPDEIN--------RHAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T-----TSSTTHHHH--------HHHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc-----CCCCchhhh--------hhhhhhhhhhhccCCHHH
Confidence 899999887554 677889999999997655444321110 000011111 122445689999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+. ...-|++ +.++.++-| ++|.- ....... .+.. ...
T Consensus 134 ~~~--------------------L~~~G~~--~~rI~~vG~~~~D~l-----~~~~~~~---~~~~-----------~~~ 172 (346)
T PF02350_consen 134 RER--------------------LLQEGEP--PERIFVVGNPGIDAL-----LQNKEEI---EEKY-----------KNS 172 (346)
T ss_dssp HHH--------------------HHHTT----GGGEEE---HHHHHH-----HHHHHTT---CC-H-----------HHH
T ss_pred HHH--------------------HHhcCCC--CCeEEEEChHHHHHH-----HHhHHHH---hhhh-----------hhH
Confidence 651 2233665 678877744 23321 0000000 0000 001
Q ss_pred CccCCCCCc-EEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 525 GYLADRKKP-IIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 525 g~l~~~~k~-vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
++.....++ ++++.=|.+. ......+.+++..+.+. +++.+++.....+ .....+.+...++
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~--- 238 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY--- 238 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT----
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc---
Confidence 221123344 4455544443 34567888888888776 6788888887544 1234444445444
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCCCH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVI-EAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvl-EAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
++++++. .++..++..+++. |+++|-=| | .+. ||..+|+|||.- +.|--.+-+..+.+-+ +. .|+
T Consensus 239 ~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~ 305 (346)
T PF02350_consen 239 DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDP 305 (346)
T ss_dssp TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSH
T ss_pred CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCH
Confidence 3899998 7889999999995 88887664 6 777 999999999998 4555566666665545 65 799
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++.++|.+++ .+++.+.++.. ...-|.-...++++.++.
T Consensus 306 ~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 306 EAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 99999996655 44444444321 123465556666666554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.7e-05 Score=82.31 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=51.8
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE------IIVDGVSGFHI 673 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~lv 673 (749)
.+++.+.+ ..+ .++..+|+. ||++|.-+-+ .++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46888887 333 578999994 9999998632 47999999999999987765433 35555678888
Q ss_pred CCCCH
Q 036539 674 DPYNG 678 (749)
Q Consensus 674 ~p~d~ 678 (749)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.9e-05 Score=80.18 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=70.4
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEE-EEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNL-VIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
+.+++++|..+..+....+++++.++. .++++ +|+|.+.. ..+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899998888775667788887653 34444 35565533 135566666553 47888874
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 657 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~ 657 (749)
..++..+|+. +|++|.+ .|.|+.|++++|+|+|+-..
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3479999995 9999995 58999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-05 Score=89.53 Aligned_cols=184 Identities=11% Similarity=0.046 Sum_probs=118.9
Q ss_pred chhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 519 DNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 519 ~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..|+.+|+ +.+..++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+.+.|
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAHG 338 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHTT
T ss_pred cCHHHcCC--CCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHcC
Confidence 45678999 77777777777664 556788888888888889999988875433 1356888888999
Q ss_pred CC-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCceEE
Q 036539 599 LK-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII-----V-DGVSGF 671 (749)
Q Consensus 599 L~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI-----~-dg~~G~ 671 (749)
+. +++.|.+ ..+..+-.+.+.. +||++=|-. -+-|.|.+||+.+|+|||+-.-..+..=+ . =|-..+
T Consensus 339 v~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 87 7899998 6667777777774 999998743 34478999999999999986422221111 1 121222
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 036539 672 HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC--YTWKIYANKMLNMGCM 729 (749)
Q Consensus 672 lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~--ysw~~~a~~ll~ly~~ 729 (749)
+. .|.++..+.-. +|.+|++.+++++++-+++..+. |+-..+++.+++.|+.
T Consensus 413 IA--~s~~eYv~~Av----~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 413 IA--DSEEEYVEIAV----RLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp B---SSHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 22 36777766664 45589999999999988876544 8999999999998875
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.6e-06 Score=91.41 Aligned_cols=104 Identities=25% Similarity=0.340 Sum_probs=70.2
Q ss_pred HHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-ceEEEE-C--CCCHHHHHHHHHHHHHH
Q 036539 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA----EIIVDG-VSGFHI-D--PYNGDESSDKIADFFEA 691 (749)
Q Consensus 620 ~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~----EiI~dg-~~G~lv-~--p~d~e~lA~aI~~~l~~ 691 (749)
.+.. .|.+.|+||.||++|-|..|---+|+|-|+|+..|.. |.|++. .-|+.+ + -..+++-.+.+.+++..
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3344 6999999999999999999999999999999988864 445443 246554 2 12455555556555544
Q ss_pred hcCCHHHHHHHHHH-HHHHHHHhCCHHHHHHHHHH
Q 036539 692 CKVDPTYWNKFSTE-GLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 692 l~~dp~~~~~ms~~-a~~~v~~~ysw~~~a~~ll~ 725 (749)
.. ...+|+++-++ --++...-.+|+.+...|.+
T Consensus 575 F~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 575 FC-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred HH-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 33 34455555443 34556666889887766654
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00048 Score=79.84 Aligned_cols=139 Identities=14% Similarity=0.020 Sum_probs=88.7
Q ss_pred CcEEEEEecccCC-----CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 532 KPIIFSMARLDVV-----KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 532 k~vIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
++++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678888986432 23455666666543 46666555432 00 2357889988
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~ 680 (749)
+ +++..++... . .+++||.- -| ..++.||+.+|+|+|+-...+ .+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH---GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ---GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec---CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 7777665531 2 37788875 22 348999999999999964433 45555555688888764 4566
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
+.++|. ++++||.+++...+-+...
T Consensus 422 l~~ai~----~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 422 LVLAIV----DVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHHH----HHhCCHHHHHHHHHHHHHH
Confidence 777775 4558888877655544443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00043 Score=76.76 Aligned_cols=241 Identities=19% Similarity=0.211 Sum_probs=137.1
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHcCCCc--EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIG-NYSDGNLVASVMASKLGIT--QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~-h~~~~~lva~lla~~~gvp--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||+++. -+++.|+-.+...++.|++ +++.+- .+-+.|+... -+..-+..|.+++.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~--------PqvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS--------PQVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC--------CceeeeCccH-----------HHHHHHHHhheeEC
Confidence 459999885 5566687766677778877 543322 1223343211 11234567888888
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-|.+ -|+. +|+ +...|-|. +|.-. +...... .
T Consensus 141 fPFE~~-------~y~~-------------~g~-----~~~~VGHPl~d~~~--~~~~~~~------------------~ 175 (373)
T PF02684_consen 141 FPFEPE-------FYKK-------------HGV-----PVTYVGHPLLDEVK--PEPDRAE------------------A 175 (373)
T ss_pred CcccHH-------HHhc-------------cCC-----CeEEECCcchhhhc--cCCCHHH------------------H
Confidence 776665 2221 233 34445443 23211 1111110 0
Q ss_pred hhhcCccCCCCCcEE-EEEe-cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 521 NEHIGYLADRKKPII-FSMA-RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 521 ~~~~g~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
++.+ + ++++++| +..| |-.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 1223 3 5566655 4445 5555 4456889999999999999999998765433 122344555555
Q ss_pred CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccc----------------c
Q 036539 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGG----------------P 660 (749)
Q Consensus 598 ~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG----------------~ 660 (749)
+..-.+... .++-+..|+ +||+.+..| |.+.+|++.+|+|.|..- .+. +
T Consensus 242 ~~~~~~~~~--------~~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL 307 (373)
T PF02684_consen 242 PPDVSIVII--------EGESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISL 307 (373)
T ss_pred CCCCeEEEc--------CCchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeec
Confidence 443334333 236788888 499988886 999999999999999863 222 2
Q ss_pred ccccccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 661 AEIIVDGV--SGFHIDPYNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 661 ~EiI~dg~--~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
+.++.+.. -=++-+.-+++.+++++.+ ++.|++.++.
T Consensus 308 ~Niia~~~v~PEliQ~~~~~~~i~~~~~~----ll~~~~~~~~ 346 (373)
T PF02684_consen 308 PNIIAGREVVPELIQEDATPENIAAELLE----LLENPEKRKK 346 (373)
T ss_pred hhhhcCCCcchhhhcccCCHHHHHHHHHH----HhcCHHHHHH
Confidence 22221110 0112233467888888854 4477766443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00043 Score=78.00 Aligned_cols=158 Identities=13% Similarity=0.081 Sum_probs=103.2
Q ss_pred CCCcEEEEEecccCCCCHHHHHH-HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTE-WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+.+++.++.|..... ..+++ ++..+... ++++++..++.. . ..-+++.++...+
T Consensus 236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA---VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD- 290 (406)
T ss_pred CCCeEEEEcCCcccH---HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec-
Confidence 344556777766544 33443 33333332 567777776622 0 1225678888888
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHID--PYNGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~--p~d~e~lA 682 (749)
+++..++.. .+|++|+.. |+| ++.||+.+|+|+|+-..+ ..++.+++-..|..++ .-+.+.++
T Consensus 291 ---~~p~~~~l~----~ad~vI~hG---G~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~ 359 (406)
T COG1819 291 ---YVPQLELLP----RADAVIHHG---GAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLR 359 (406)
T ss_pred ---CCCHHHHhh----hcCEEEecC---Ccc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHH
Confidence 666666555 699999983 444 899999999999996444 3566677777898887 57888999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.++ ++|+..++...+... -..+.-.-+.+++.++++.+
T Consensus 360 ~av~~v----L~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 360 AAVNEV----LADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHH----hcCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHHh
Confidence 999654 488877766544443 34455665666666666543
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00063 Score=74.36 Aligned_cols=200 Identities=20% Similarity=0.173 Sum_probs=117.1
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHcCC--CcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIGNY-SDGNLVASVMASKLG--ITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~h~-~~~~lva~lla~~~g--vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||++++-+ ++.|+-....-++.| +|+++.+- .|-+.|+.-. -....+..|.+.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~--------PsVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS--------PSVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC--------cceeeechhh-----------HHHHHHHhhHeeee
Confidence 56999998655 556654444445555 77664433 2334454321 12245778999998
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-+.+ +|. ..|++ ...|-+ =+|.-.+.+... ..
T Consensus 144 lPFE~~-------------------~y~-k~g~~-----~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPA-------------------FYD-KFGLP-----CTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHH-------------------HHH-hcCCC-----eEEeCChhhhhccccccHH--------------------HH
Confidence 876655 121 11221 233333 233222223222 22
Q ss_pred hhhcCccCCCCCcE-EEEEe-cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 521 NEHIGYLADRKKPI-IFSMA-RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 521 ~~~~g~l~~~~k~v-Il~vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
++.+|+ +.++++ .+..| |-.+ .+....+++++.+++.+.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 356777 555555 44455 4444 5577888999999998999999988766543 22333322222
Q ss_pred C-CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 598 Q-LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 598 ~-L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
. ..-.+... .++-+..++ +||+.+..| |.+.+|+|.+|+|+|.+-
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 2 11222222 346677787 499887775 999999999999999973
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0025 Score=69.79 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=43.8
Q ss_pred HHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 619 YRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---GPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 619 ~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G---G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
..+++ -||++|-- -|....||...|+|+|.+-.| +.-+.+.+ .|.++...|++++.+.+.+
T Consensus 243 ~~Ll~-~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 243 LDLLY-YADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHHH-hcCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHH
Confidence 35666 38898865 377789999999999987543 23233333 4778888899998886644
|
They are found in archaea and some bacteria and have no known function. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.028 Score=64.48 Aligned_cols=140 Identities=10% Similarity=0.093 Sum_probs=76.6
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDV--VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4567788887643 12244444444442 457776654321 1121111 24566666
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC-------C
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHIDP-------Y 676 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv~p-------~ 676 (749)
+++..++... . +.++||.-. | -.+++||+++|+|+|+-...+ ....+.+. +.|+-+.. -
T Consensus 330 ---w~pQ~~iL~h-~-~v~~fvtHg---G-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 400 (459)
T PLN02448 330 ---WCDQLKVLCH-S-SVGGFWTHC---G-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLV 400 (459)
T ss_pred ---cCCHHHHhcc-C-ccceEEecC---c-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcC
Confidence 7777777662 1 133465541 2 348999999999999964443 44445442 45666632 2
Q ss_pred CHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDP-TYWNKFSTEGL 707 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~ 707 (749)
+.+++++++.+++ .++ +..++|.+++.
T Consensus 401 ~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 401 GREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred cHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 5677888876544 553 33344444443
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0017 Score=73.84 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=122.5
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
|+..|+ +++..++++.++. .|-...+++.+.++.+.-|+-.|++.|+|++ .+....+++++++.|+.
T Consensus 421 R~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~ 487 (620)
T COG3914 421 RAQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVD 487 (620)
T ss_pred hhhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCC
Confidence 356888 6777666666654 4544455555555555678999999999865 13467899999999986
Q ss_pred -CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEE
Q 036539 601 -GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-------NQGGPAEIIV-DGVSGF 671 (749)
Q Consensus 601 -~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-------~~GG~~EiI~-dg~~G~ 671 (749)
.+++|++ +.++++....+. -+|+++=+-.|- -+.|.+||+.+|+||++- ..|+ .++. -|..-.
T Consensus 488 ~eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~-g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~ 559 (620)
T COG3914 488 SERLRFLP----PAPNEDHRARYG-IADLVLDTYPYG-GHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPEL 559 (620)
T ss_pred hhheeecC----CCCCHHHHHhhc-hhheeeecccCC-CccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchh
Confidence 7899999 666777777777 599988664443 367999999999999873 2332 1221 122333
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 036539 672 HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE--CYTWKIYANKMLNMGC 728 (749)
Q Consensus 672 lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~ 728 (749)
+.+ +.++..++-. .+-.|...+++.+..-.+.... -|+-+..++++.++|.
T Consensus 560 vA~--s~~dYV~~av----~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 560 VAD--SRADYVEKAV----AFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred hcC--CHHHHHHHHH----HhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 333 4444443332 3457887888776665555434 4899999999999974
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.005 Score=67.09 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=90.7
Q ss_pred CcEEEecCccCcCCh-HHHHHHHHccCcEEEECCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 036539 601 GQMRWIAAQSDRLRN-GELYRCIADTKGAFVQPAL---YEA---FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI 673 (749)
Q Consensus 601 ~~V~flG~~~~~~~~-~el~~~la~aadvfV~PS~---~E~---fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv 673 (749)
+++..+| +... +.+...++. .++++.-++ -++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=++.
T Consensus 237 ~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~ 311 (373)
T COG4641 237 PNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY 311 (373)
T ss_pred chhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe
Confidence 4566666 3333 667777774 777665443 222 377899999999999999888888888888765555
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 674 DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 674 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
. |..++.+++. .+...++.++++.+.|.+++...||.+.-+..+++...
T Consensus 312 ~--d~kdl~~~~~----yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 312 Q--DSKDLKEKLK----YLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred c--CHHHHHHHHH----HHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 4 8999999994 56689999999999999999999999988877777554
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.008 Score=69.98 Aligned_cols=197 Identities=15% Similarity=0.102 Sum_probs=110.5
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHcCCC--cEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIG-NYSDGNLVASVMASKLGI--TQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~-h~~~~~lva~lla~~~gv--p~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||++++ -+++.|+-.+..+++.|+ |+++.+- .+-..|+.-. -+..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs--------PqVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC--------PSIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC--------ccceeeCcch-----------HHHHHHHhhhheec
Confidence 459999996 556668765566677785 8764332 1223343211 11234567888888
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-|.+ +|+ .+|++ ...|-|. +|.-...+... +.
T Consensus 369 fPFE~~-------------------~y~-~~gv~-----v~yVGHPL~d~i~~~~~~~--------------------~~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSPLR-----TVYLGHPLVETISSFSPNL--------------------SW 403 (608)
T ss_pred CccCHH-------------------HHH-hcCCC-----eEEECCcHHhhcccCCCHH--------------------HH
Confidence 776665 222 23443 3444332 33311111111 11
Q ss_pred hhhcCccCCCCCcEE-EEEe-cccC-CCCHHHHHHHHH--HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH
Q 036539 521 NEHIGYLADRKKPII-FSMA-RLDV-VKNLTGLTEWYG--KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME 595 (749)
Q Consensus 521 ~~~~g~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 595 (749)
++++|+ ++++++| +..| |-.+ .+.+..+++++. .+.+ +.++++...... ..+.+.+.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchh-----------hHHHHHHHHh
Confidence 345676 5555655 4445 5555 557788888887 4433 577766432211 1234445444
Q ss_pred HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 596 KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 596 ~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+. -.+..+. .++-+.+++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3321 1234432 112367888 599999886 99999999999999985
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.07 Score=58.79 Aligned_cols=277 Identities=15% Similarity=0.168 Sum_probs=164.8
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+|..|.-.. .++++++|...++|+++.--++-. .+.+|-. . ..-.+.-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---E-------~NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---E-------INRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---H-------HHHHHHHHhhhhhcCChH
Confidence 34999999987554 677789999999999876555521 1111111 0 001123344666677776
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+ +...-|++ ..++.|+-|-+-.. ..- ...+... .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iDa-l~~---~~~~~~~-----------~~~~~~~ 197 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVIDA-LLN---TRDRVLE-----------DSKILAK 197 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHHH-HHH---HHhhhcc-----------chhhHHh
Confidence 6554 22333665 66788887743110 000 0000000 0000001
Q ss_pred cCccCCCCC-cEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH-HHcCCC
Q 036539 524 IGYLADRKK-PIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM-EKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k-~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~~~~L~ 600 (749)
+ +.+.++ -++++.-|-... +++..+++++.++.+.++++.++.--... ..+++.. ..++-.
T Consensus 198 ~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 198 G--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred h--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 0 113443 445555566543 99999999999999888776665544332 2333333 455555
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e 679 (749)
.+|..+. ++...+...++.. |-+.+-= .|--.=||-..|+||++-+.+ .-+|-++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-AFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-ceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6799987 7778888888885 5343333 366678999999999997444 356666544 455664 3667
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
.+.+++ ..++++++..++|+.. ...|.=...++++.++...|
T Consensus 330 ~i~~~~----~~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 330 NILDAA----TELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHH----HHHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHHH
Confidence 777777 4556898888887554 45676666777777766554
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.002 Score=77.04 Aligned_cols=150 Identities=17% Similarity=0.103 Sum_probs=106.2
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH----HHHHHHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG----LTEWYGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|+..+++...++++-|+..+|.... .++.+.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666889999999999999999888 445566665431 1245555554433 2444444555566665
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. .... .+.+.+-.++||-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 532 2334 688886 3433 444555557999998887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 036539 667 --GVSGFHIDPYNGDESS 682 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA 682 (749)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 789999954 444443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0037 Score=73.99 Aligned_cols=143 Identities=18% Similarity=0.143 Sum_probs=108.8
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHH----HHHHHhH-ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKNK-RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
.|+..+++...++++-|+..+|..+..+ ..+..++ ...|.+.+++.|...+ .|..-...++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 4555578899999999999999877765 3444444 3335555555555433 45566667777888888877
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEEC
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIV--DGVSGFHID 674 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~lv~ 674 (749)
...+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|.+-+=||.-|.++|+|--|...|+.+ ++.|||.|-
T Consensus 555 ~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 667899997 3333 455555557999998876 8999999999999999999999999999997 889999995
Q ss_pred C
Q 036539 675 P 675 (749)
Q Consensus 675 p 675 (749)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.54 Score=53.75 Aligned_cols=93 Identities=11% Similarity=0.099 Sum_probs=54.9
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc-HHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEEC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG-LTVIEAMNCGLPTFATNQ----GGPAEIIVD-GVSGFHID 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG-LtvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~lv~ 674 (749)
.++...+ +++..++...= +.++||.- +| ++++||+++|+|+|+-.. ......+.+ -+.|..++
T Consensus 311 ~g~~v~~----W~PQ~~iL~H~--~v~~FvtH-----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 379 (442)
T PLN02208 311 RGVVWGG----WVQQPLILDHP--SIGCFVNH-----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVS 379 (442)
T ss_pred CCcEeec----cCCHHHHhcCC--ccCeEEcc-----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEec
Confidence 3455556 77776765521 12345432 33 489999999999999633 334444433 45777775
Q ss_pred C-----CCHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 036539 675 P-----YNGDESSDKIADFFEACKVDP-TYWNKFSTEGLK 708 (749)
Q Consensus 675 p-----~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~ 708 (749)
. -+.++++++|.+++ .++ +..+++.+++++
T Consensus 380 ~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 380 REKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred cccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 4 25677888886544 554 344555555443
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0027 Score=75.98 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=109.0
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LTEW---YGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|...+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 447767888899999999999999888 5544 55555421 1356666665543 3455555666666666
Q ss_pred HH----cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EK----YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~----~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+. -.+.+ +|.|+. ..+. .+.+.+-.++||-.+-|. .|+.|.+=+=||.-|.++++|--|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 62 22334 788887 3444 445555557999998887 89999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHH
Q 036539 667 --GVSGFHIDPYNGDESSD 683 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA~ 683 (749)
++|||.|-. +.++.++
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 4555443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.21 Score=53.63 Aligned_cols=168 Identities=8% Similarity=0.025 Sum_probs=112.2
Q ss_pred cEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 533 PIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 533 ~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
++.+-+|+ =|+--+.-.+++++.+... .++++++.=+-+. ...+|++++.+..+++--.++++.+- +
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 45555665 4667777777777776643 5788877766543 12467888988888886557888876 4
Q ss_pred cCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS-~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++-+|..++++. +|+.++-- +.+|.| +++=.+..|+||+-+ ++.-..+..+.|.. ++++..+. -..+.+
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L---~~~~v~-- 285 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDL---DEDIVR-- 285 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcc---cHHHHH--
Confidence 7889999999995 99988764 588999 555679999999997 55556666666543 33443322 111110
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 690 EACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 690 ~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+..+++...-++.+. |+-+.+.+.+.+++..
T Consensus 286 -------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 -------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred -------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 112334444445552 8888888888887754
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0076 Score=59.60 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhh-----hcCcccccchhhhHH
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWK-----ELDPKYHFSCQFIAD 428 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~-----~~~~~y~f~~~~~~e 428 (749)
.++..+++. +..||||++|...|.. ..++..+ ++|++.-+--...... ++..+. ......+...+-...
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g--~d~~FDpe~p~~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASG--ADVGFDPEFPPSLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCC--CcCCCCCCCCCCHHHHHHHHHHhHHH
Confidence 334444444 6789999999877632 3445555 6776642211100100 111110 011111112222345
Q ss_pred HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC
Q 036539 429 TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY 493 (749)
Q Consensus 429 ~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f 493 (749)
...+..||..|+.|.-.+. +| |. .+..||.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 5678889999999965544 22 22 236799999999998765
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.79 E-value=1.6 Score=50.51 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=69.0
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIV-DGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~-dg~~G~lv~p 675 (749)
.+++..+ +++..++... .+.++||.-. |+ .+++||+++|+|+|+-. ..-....+. .-+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTHC---GW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEecC---Cc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4567767 7777665552 1256776552 22 48999999999999953 333444443 3357776632
Q ss_pred -----CCHHHHHHHHHHHHHHhcCCHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 676 -----YNGDESSDKIADFFEACKVDPTYW---NKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 676 -----~d~e~lA~aI~~~l~~l~~dp~~~---~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
-+.+++++++.+.+. ++++.+ +++++.+++.+.+.=+-....+++.+.++.+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256778888866542 344433 33444444444343445555667766666555
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=1.3 Score=50.34 Aligned_cols=133 Identities=15% Similarity=0.126 Sum_probs=70.2
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCc
Q 036539 548 TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKG 627 (749)
Q Consensus 548 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aad 627 (749)
..+.+++..+.+. +.+++++-.-.. .++..++. ....+++.+.+.-..+++.+. +.....++..+++. +|
T Consensus 260 ~~la~~i~~Li~~--g~~Vv~lp~~~~-~~~~~~dD---~~~~~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~d 329 (426)
T PRK10017 260 KAFAGVVNRIIDE--GYQVIALSTCTG-IDSYNKDD---RMVALNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CE 329 (426)
T ss_pred HHHHHHHHHHHHC--CCeEEEEecccC-ccCCCCch---HHHHHHHHHhcccccceeEec---CCCChHHHHHHHhh-CC
Confidence 3455666666543 455555543211 00101111 222334444444334445443 13445688899995 99
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECC--CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 628 AFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDGVSGFHIDP--YNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 628 vfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~lv~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
++|-.-. -..+=|++.|+|+|+-.. -|..+.+ |...++++. -+.+++.+++. ++++|.+.+++
T Consensus 330 l~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~----~~~~~r~~~~~ 398 (426)
T PRK10017 330 LTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL--GLPEMAIDIRHLLDGSLQAMVA----DTLGQLPALNA 398 (426)
T ss_pred EEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--CCccEEechhhCCHHHHHHHHH----HHHhCHHHHHH
Confidence 9876532 267889999999999643 2333333 223344443 34566777764 45567655444
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0049 Score=73.54 Aligned_cols=149 Identities=13% Similarity=0.018 Sum_probs=104.6
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LTEW---YGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|...+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 446666888888999999999999887 5444 45554320 1256666665543 3444444555555555
Q ss_pred HHcC----CCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKYQ----LKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~~----L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+..+ +.+ +|.|+. .... .+.+.+-.++||-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 4432 234 688887 3444 444445447999998887 89999999999999999999999999999876
Q ss_pred --CceEEEECCCCHHHH
Q 036539 667 --GVSGFHIDPYNGDES 681 (749)
Q Consensus 667 --g~~G~lv~p~d~e~l 681 (749)
++|||.|-. +.+++
T Consensus 671 vG~eN~f~fG~-~~~ev 686 (798)
T PRK14985 671 VGEENIFIFGH-TVEQV 686 (798)
T ss_pred hCcCcEEEeCC-CHHHH
Confidence 789999964 44443
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.011 Score=70.53 Aligned_cols=150 Identities=18% Similarity=0.103 Sum_probs=104.7
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LT---EWYGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|...+++...++++-|+..+|.... ++ +.+.++++.- ....+++.|...+ .+..-...++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 457666888889999999999999888 44 4455554321 1345655555433 2334344455555555
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 1334 788887 3444 344444447999998887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 036539 667 --GVSGFHIDPYNGDESS 682 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA 682 (749)
++|+|+|-. +.++..
T Consensus 669 vG~eN~fiFG~-~~~ev~ 685 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVE 685 (794)
T ss_pred hCcccEEEcCC-CHHHHH
Confidence 789999954 445444
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.59 E-value=2 Score=49.22 Aligned_cols=88 Identities=9% Similarity=0.028 Sum_probs=54.3
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-----CCHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIV-DGVSGFHIDP-----YNGDES 681 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~-dg~~G~lv~p-----~d~e~l 681 (749)
+++..++.+. . +.++||.-. =-++++||+.+|+|+|+-... -.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 6777776652 1 235676542 235899999999999996433 3445553 4467777743 366788
Q ss_pred HHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDP-TYWNKFSTEGLKR 709 (749)
Q Consensus 682 A~aI~~~l~~l~~dp-~~~~~ms~~a~~~ 709 (749)
++++.+++ .++ +..+++.+++++.
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 88886544 443 4455555555543
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.57 E-value=2.2 Score=49.38 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=51.7
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccc-cccccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPA-EIIVDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~-EiI~dg~~G~lv~p 675 (749)
+++.+.+ +++..++... . +.++||.- -|+ .+++||+.+|+|+|+-... ..+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 7777666642 1 34555543 222 4899999999999996433 333 33444456766641
Q ss_pred -------------CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 676 -------------YNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 676 -------------~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256777777765441 25554443
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.57 E-value=2.1 Score=49.09 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=50.4
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~p 675 (749)
+++.+.+ +++..++...= +.++||.- +=.++++||+++|+|+|+-. ..-....+.+. +.|.-+..
T Consensus 317 ~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 317 DKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred CceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 5677777 77777766531 13455543 12369999999999999963 33345555543 46766642
Q ss_pred C------CHHHHHHHHHHHH
Q 036539 676 Y------NGDESSDKIADFF 689 (749)
Q Consensus 676 ~------d~e~lA~aI~~~l 689 (749)
. +.+++++++.+++
T Consensus 387 ~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred cccCCcccHHHHHHHHHHHh
Confidence 1 5678888886554
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.043 Score=60.59 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=57.6
Q ss_pred cEE-EEEecc-cC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 533 PII-FSMARL-DV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 533 ~vI-l~vGRL-~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
++| ++.|.- .+ .+.+..+++++.++.+.. ..+++.|.. . .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec--
Confidence 444 444532 22 456677779999988643 567776553 2 13333433322 2344543
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
+.+.+|+ +||+.+..| |.+.+|++.+|+|.|..
T Consensus 228 -------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 -------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred -------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3467788 599988886 88889999999999985
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.55 Score=51.22 Aligned_cols=121 Identities=8% Similarity=0.024 Sum_probs=85.4
Q ss_pred CcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
++.-+.+|+ -++.-+.-..++++.+.. ..++++++-=+-+. ...+|++++.+.++++--.+++..+-
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 344445665 466667777777776533 34677766544432 12467888888888875556787765
Q ss_pred CcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.++-+|..++++. ||+.++... ..|.| +++=.+.+|+||+-+.....-....+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999995 999999874 78898 56668999999999866655444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.42 E-value=1.5 Score=47.90 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=75.3
Q ss_pred CCCcEEEEEecccCCCCHHHH---HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 530 RKKPIIFSMARLDVVKNLTGL---TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~L---ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
.+..+++++| .-.-|-+.+ ++|+..++...+ .-++|.|.... .+...++.....-.++|..+
T Consensus 218 E~~~Ilvs~G--GG~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVG--GGADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecC--CChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 3456778887 334444333 333333333222 23555665554 34444455544445778887
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCceEEEECCC--
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE--IIV------DGVSGFHIDPY-- 676 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E--iI~------dg~~G~lv~p~-- 676 (749)
-+.. ++..+++. |+..|.=+-| +|+.|-+++|||.+.-..+.+.| .+. =|-..++ .|.
T Consensus 283 ~f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~l 350 (400)
T COG4671 283 EFRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENL 350 (400)
T ss_pred Ehhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccC
Confidence 7533 78889995 8887765432 58999999999998865554444 221 1222333 343
Q ss_pred CHHHHHHHHHHH
Q 036539 677 NGDESSDKIADF 688 (749)
Q Consensus 677 d~e~lA~aI~~~ 688 (749)
.++.+|++|...
T Consensus 351 t~~~La~al~~~ 362 (400)
T COG4671 351 TPQNLADALKAA 362 (400)
T ss_pred ChHHHHHHHHhc
Confidence 366677777543
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.30 E-value=3.1 Score=48.17 Aligned_cols=78 Identities=10% Similarity=0.176 Sum_probs=45.8
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVD-GVSGFH 672 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~l 672 (749)
..++...+ +++..++.. .++ +||.-. | -++++||+.+|+|+|+-...+ .+..+.+ -+.|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 35677777 777766555 343 465542 2 248999999999999964333 3332221 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 036539 673 ID----------PYNGDESSDKIADFF 689 (749)
Q Consensus 673 v~----------p~d~e~lA~aI~~~l 689 (749)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 125677778875544
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.30 E-value=3 Score=47.92 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=50.4
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC-
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHID- 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~- 674 (749)
++....+ +++..++...= +.++||.-. |+ ++++||+++|+|+|+-. ....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h~--~v~~fvtH~---G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSHP--AVGGFWSHC---GW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCCC--ccCeeeecC---ch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5555556 77887766631 244566552 22 48999999999999963 33344555443 5777663
Q ss_pred CCCHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFF 689 (749)
Q Consensus 675 p~d~e~lA~aI~~~l 689 (749)
.-+.++++++|.+++
T Consensus 394 ~~~~~~v~~av~~lm 408 (451)
T PLN02410 394 DLDRGAVERAVKRLM 408 (451)
T ss_pred cccHHHHHHHHHHHH
Confidence 236678888886544
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.28 E-value=3.1 Score=47.86 Aligned_cols=165 Identities=12% Similarity=0.087 Sum_probs=84.4
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
...+.+++|.+... .-+.+-+++..+... ..+|++ ++.... ..+ .+.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~---~~~------~~~~~~~~~----~~~g~v~~-- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEK---AQN------VQVLQEMVK----EGQGVVLE-- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCcc---ccc------hhhHHhhcc----CCCeEEEe--
Confidence 45677888887542 334455555545443 345544 332111 001 111222211 13333445
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC------CCH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVD-GVSGFHIDP------YNG 678 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~lv~p------~d~ 678 (749)
+++..++...- +.++||.- -|+ .+++||+.+|+|+|+-.. .-.+..+.+ -+.|..++. -+.
T Consensus 331 --w~PQ~~iL~h~--~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 --WSPQEKILSHM--AISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred --cCCHHHHhcCc--CcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 77776655521 12466654 222 389999999999999543 334445554 467877742 366
Q ss_pred HHHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPT------YWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~------~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++++++.+++ .+++ ...++++.+++-+.+.=|-....+++.+
T Consensus 403 ~~l~~av~~~m----~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~ 451 (456)
T PLN02210 403 EEVERCIEAVT----EGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFIS 451 (456)
T ss_pred HHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 78888886544 4532 2233455555554443333333444433
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.22 E-value=3.2 Score=47.57 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=57.0
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVD-GVSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~d-g~~G~lv~ 674 (749)
.+++...+ +++..++... . +.++||.- -| -.+++||+.+|+|+|+-. ....+..+.+ -+.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35677777 7777777663 1 23455543 22 348999999999999863 4444555544 25677775
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 557788888886544 67665544
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.27 Score=59.06 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=123.6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
..+.++|-|+|...|............ ...+.-. -.++.+|+-+-|++..||+..=+.++.++.
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~---------------~~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L 302 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSK---------------GMEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFL 302 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHH---------------HHHHhhh-ccCCceEecccccccccCchHHHHHHHHHH
Confidence 356678889988777543321110000 0111110 246788999999999999988888888876
Q ss_pred ccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCC--CCcEEEecCccCcCChHHHHHHHHccCcEEEE
Q 036539 559 RLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQL--KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQ 631 (749)
Q Consensus 559 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L--~~~V~flG~~~~~~~~~el~~~la~aadvfV~ 631 (749)
..+| .+.++.+..+.......-.+...+.......+++ .+- ...|+++- ..++..++.++++ .+|+...
T Consensus 303 ~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v 378 (732)
T KOG1050|consen 303 EEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPV 378 (732)
T ss_pred HhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheee
Confidence 6554 4667777665541111111112222222222222 221 12344332 3677889999999 5999999
Q ss_pred CCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 632 PALYEAFGLTVIEAMNCG----LPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 632 PS~~E~fGLtvlEAMa~G----lPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++.+|..++.+|+..|. .+-|.+..-|..+..++ ...+++|.|.++++..|..++
T Consensus 379 ~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al 438 (732)
T KOG1050|consen 379 TSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWDGDEFAILISKAL 438 (732)
T ss_pred cccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECCcchHHHHHHHHHHh
Confidence 999999999999999984 77888888888888866 457889999999999997766
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.43 Score=50.23 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=78.5
Q ss_pred EEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHH------HHH-HHHHc--CCCCcEEEe
Q 036539 536 FSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKK------MHA-LMEKY--QLKGQMRWI 606 (749)
Q Consensus 536 l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~------l~~-li~~~--~L~~~V~fl 606 (749)
.|+||....||+..+++.-++..+. +...-++-|-... +.-....++ ... .+.+. .-.+.+..+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS------~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~ 259 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERS------PAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVY 259 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SS------THHHHHHHTT--EEEE-CTGGGG---SSS--EEEE
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcC------CceeeeecCCcccccCccccccCcccCCCCcceec
Confidence 7999999999999999999886543 5667777665433 111111110 000 01111 112346677
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCceEEE
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGL-PTFATNQGGPAE-------IIVDGVSGFH 672 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~------~E~fGLtvlEAMa~Gl-PVVat~~GG~~E-------iI~dg~~G~l 672 (749)
| +.-++|....|+. +...++-+. .+..--+-+|..|||. ||+-+..|.... .+.+..+.+.
T Consensus 260 ~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~ 334 (355)
T PF11440_consen 260 G----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIY 334 (355)
T ss_dssp S----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EE
T ss_pred c----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeE
Confidence 7 7778899999995 666665543 3557789999999996 888776665433 3334456788
Q ss_pred ECCCCHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIAD 687 (749)
Q Consensus 673 v~p~d~e~lA~aI~~ 687 (749)
++..|-++..++|.+
T Consensus 335 ~De~dle~T~ekl~E 349 (355)
T PF11440_consen 335 FDENDLESTVEKLIE 349 (355)
T ss_dssp E-TTSHHHHHHHHHH
T ss_pred eccchHHHHHHHHHH
Confidence 999999999888854
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.029 Score=48.74 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=48.3
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
.+.+++.+|+... .+....|.+..... +.+.+.- +++.||||+|...+ +.-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~p-l~R~Ili--rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFP-LLRNILI--RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhH-HHHHHHH--HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 3688889987652 23344454443333 2333332 45899999998776 4557788999999999999
Q ss_pred cCCc
Q 036539 398 HALE 401 (749)
Q Consensus 398 H~l~ 401 (749)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9873
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.79 Score=49.91 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=67.6
Q ss_pred CCCcEEEEEecccCCC--CHH---HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 530 RKKPIIFSMARLDVVK--NLT---GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K--gl~---~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+.+.+.+.+|.=++.- +.+ .|++.+..+.+... ..+.|..+-..| + +..+.+.+. ++-...+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp------~--~~~~~L~~~---~~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP------P--EAEAALREL---LKDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc------H--HHHHHHHHh---hcCCCceE
Confidence 4455666788533322 223 56666666665544 789888887662 1 112233333 33345664
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
+.. .-..+-+..+|+ .||.++++.. .-.-+.||.++|+||..-...+
T Consensus 213 ~~~----~~~~nPy~~~La-~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWD----GTGENPYLGFLA-AADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Eec----CCCCCcHHHHHH-hCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 443 223445778888 4999999843 3335789999999999987766
|
The function of this family is unknown. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.19 Score=59.72 Aligned_cols=149 Identities=16% Similarity=0.121 Sum_probs=93.0
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHH----HHHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGL----TEWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|...+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|..-.+.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 4565557888889999999999998883 4556666543 12366777776544 3444445555555555
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. ..+. .+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|--|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 432 2334 689987 4444 455566557999999886 89999999999999999999999999999854
Q ss_pred --CceEEEECCCCHHHH
Q 036539 667 --GVSGFHIDPYNGDES 681 (749)
Q Consensus 667 --g~~G~lv~p~d~e~l 681 (749)
.++.|+|-. +.+++
T Consensus 586 vG~eN~fiFG~-~~~ev 601 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEEV 601 (713)
T ss_dssp H-GGGSEEES--BHHHH
T ss_pred cCCCcEEEcCC-CHHHH
Confidence 457888853 44443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.73 Score=48.77 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=80.8
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++|.=|+ ||++. +.++.+.+. ++++.||-+...| ..+.+.+.++++ +++.++-
T Consensus 159 r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~---- 216 (318)
T COG3980 159 RDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI---- 216 (318)
T ss_pred heEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe----
Confidence 447778886555 76544 444445442 3677555543221 145566666554 6777753
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CceEEEECCCCHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP--TFA--TNQGGPAEIIVD----GVSGFHIDPYNGDESSD 683 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP--VVa--t~~GG~~EiI~d----g~~G~lv~p~d~e~lA~ 683 (749)
..+++.++|.+ ||..+.. -|.|+.||...|+| |++ .+.-..+...+. ...|++.+ ..+...
T Consensus 217 --~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHHH
Confidence 35589999996 8887765 38999999999999 333 222222222211 23455532 233444
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
.+ ..+.+|+..+..++..++
T Consensus 286 ~~----~~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 286 EI----LQIQKDYARRKNLSFGSK 305 (318)
T ss_pred HH----HHhhhCHHHhhhhhhccc
Confidence 44 345578887777665543
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=94.82 E-value=9.8 Score=43.75 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=70.5
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 531 KKPIIFSMARLDV--VKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 531 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+..+.+++|.+.. .+-+..+..++..+.. +|+. +.+......+.+.++.........+.++. .++....+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 4566778887652 4455666666665532 3433 33211100000001000000011222222 35555556
Q ss_pred CccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC-----C
Q 036539 608 AQSDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHID-----P 675 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~-----p 675 (749)
+++..++.. ... +||.-. =.++++||+.+|+|+|+-. .......+.+. +.|+-+. .
T Consensus 334 ----W~PQ~~iL~----h~~vg~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 ----WCSQIEVLR----HRAVGCFVTHC----GWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred ----eCCHHHHhC----CcccceEEeeC----CcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 777766655 244 455432 2348999999999999963 33344444441 2455542 1
Q ss_pred CCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFF 689 (749)
Q Consensus 676 ~d~e~lA~aI~~~l 689 (749)
.+.+++++++.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 25678888886655
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.53 Score=52.19 Aligned_cols=165 Identities=13% Similarity=0.147 Sum_probs=76.6
Q ss_pred hhcCccCCCCCcEEEEEecccCCCC------HHHH--HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHH
Q 036539 522 EHIGYLADRKKPIIFSMARLDVVKN------LTGL--TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHAL 593 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~~~Kg------l~~L--ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 593 (749)
+.+|+ +.++++|+|+=.+..... .... .+.+..+ ..+++.+++-..... ...
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~li~k~Hp~~----------------~~~ 243 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFL--LKNNYVLIIKPHPNM----------------KKK 243 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHH--HTTTEEEEE--SHHH----------------HTT
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHHH--hCCCcEEEEEeCchh----------------hhc
Confidence 34566 677789999965433211 1112 2222222 335777777664422 111
Q ss_pred HHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccc
Q 036539 594 MEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT--NQ-------GGPAEI 663 (749)
Q Consensus 594 i~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat--~~-------GG~~Ei 663 (749)
... ....++|.++. +..++..++.. +|++|.= ++-++.|++.+++|||-- |. |...+
T Consensus 244 ~~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVS------DNEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-T------T-S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECC------CCCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 111 33457788865 23378999994 9998864 456999999999999954 33 22223
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 664 I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
..+...|-.+. +.+++.++|.+++ .++....+-.+.-++.. -.|.=...++++.+.
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~----~~~~~~~~~~~~~~~~~-~~~~Dg~s~eri~~~ 366 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII----ENPDEYKEKREKFRDKF-FKYNDGNSSERIVNY 366 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH----HHHHHTHHHHHHHHHHH-STT--S-HHHHHHHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh----hCCHHHHHHHHHHHHHh-CCCCCchHHHHHHHH
Confidence 22333455554 8899999986654 33433322222222222 124444566666553
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.002 Score=63.11 Aligned_cols=91 Identities=18% Similarity=0.216 Sum_probs=56.8
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG--------PAEIIVDGVSGFH 672 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~l 672 (749)
.+|.+.++.+ ++..+|+. ||++|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789998544 47888884 99988753 2479999999999998865544 2222333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 036539 673 IDPY--NGDESSDKIADFFEACKVDPTYWNKFSTEG 706 (749)
Q Consensus 673 v~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 706 (749)
+... +++.+.++| ..+..++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4322 356677777 56678888777766554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.21 E-value=5.1 Score=42.43 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred CCCCcEEEEEecccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CCC
Q 036539 529 DRKKPIIFSMARLDVV-------KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QLK 600 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~ 600 (749)
..+++.|++....... .+...+.+.+..+.+..|+++++|-=.... ....+ . ....+. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~-~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDE-RGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchh-hCCCC------h----hHhhhhhcC-
Confidence 5678888888876553 244566677777766667888876554321 00000 0 222222 33
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.++.++. +...++.++.. +|.++.-+ +.+-+||+.+|+||++-
T Consensus 182 ~~~~~~~------~~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 182 PNVVIID------DDVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CCeEEEC------CCCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 3444443 12356777775 77766553 56899999999999995
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.14 E-value=8 Score=41.74 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=36.1
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHH
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---GPAEIIVDGVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~GlPVVat~~G---G~~EiI~dg~~G~lv~p~d~e~lA~aI~ 686 (749)
|++++- +-|.---||...|+|.|.+.-| +.-+... +.|.++...|+.+..+...
T Consensus 253 a~lvig-----~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~ 309 (346)
T COG1817 253 ATLVIG-----AGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAV 309 (346)
T ss_pred hheeec-----CCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHH
Confidence 556543 3466678999999999998744 2333332 3688888888876555553
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.15 E-value=28 Score=40.43 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=49.9
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEII-VDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~lv~p 675 (749)
..+.+.+ +++..++...-+ .+.||.- +=-++++||+.+|+|+|+-... .....+ +.-+.|..++.
T Consensus 338 rg~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 338 RGFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CCEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 3467767 777777666311 2335543 1235899999999999996433 344454 34456777753
Q ss_pred ----CCHHHHHHHHHHHH
Q 036539 676 ----YNGDESSDKIADFF 689 (749)
Q Consensus 676 ----~d~e~lA~aI~~~l 689 (749)
-+.++++++|.+++
T Consensus 408 ~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 408 PKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCcccHHHHHHHHHHHh
Confidence 36678888886654
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.32 E-value=13 Score=39.18 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=65.1
Q ss_pred CCCCcEEEEEecccCCCCH--HHH---HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCc
Q 036539 529 DRKKPIIFSMARLDVVKNL--TGL---TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQ 602 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl--~~L---ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~ 602 (749)
.+..++-+++|.-.+.-.. +.+ +.++-+... .....+++--+-.. -+..+..++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556677888865543333 223 333333222 13467777776655 2345555555 333344
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~ 660 (749)
+.|-+.-++ ..-...+++ +||.++..... =.-.-||.+.|+||++-...+.
T Consensus 226 i~w~~~d~g---~NPY~~~La-~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTG---YNPYIDMLA-AADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCC---CCchHHHHh-hcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 666553222 224667788 59999988542 2235799999999998755443
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=89.85 E-value=2.3 Score=45.09 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=63.7
Q ss_pred EEEEEecccCCC--CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 534 IIFSMARLDVVK--NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 534 vIl~vGRL~~~K--gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+++..|.-.+.| ..+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 344444334434 456778888877764 689999987644 333444444443223345566
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. +|++|.+. + | .+-=|.+.|+|+|+-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 5678899999996 99999984 2 3 344456999999995
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=89.13 E-value=1.1 Score=51.78 Aligned_cols=131 Identities=14% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCcEEEEEecccCCCCHHH----HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 531 KKPIIFSMARLDVVKNLTG----LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
++.++++.|.+.. .-.+. ++++++++ |. +++..-.+.. .. .++.++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEEe
Confidence 3456788888753 23333 44444443 34 6666655532 01 123567777
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCCC--HHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDGVSGFHIDPYN--GDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~lv~p~d--~e~ 680 (749)
. +++..++... ...++||.- |=-.++.||+.+|+|+|+-.. ...+..+++...|..++..+ .++
T Consensus 329 ~----W~PQ~~lL~h--p~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 329 K----WLPQNDLLAH--PRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp S----S--HHHHHTS--TTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred c----cccchhhhhc--ccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 6 7777666441 113455543 223589999999999999633 33455555656788887554 566
Q ss_pred HHHHHHHHHHHhcCCHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~m 702 (749)
+.++|.+ +++|+.+++..
T Consensus 399 l~~ai~~----vl~~~~y~~~a 416 (500)
T PF00201_consen 399 LRAAIRE----VLENPSYKENA 416 (500)
T ss_dssp HHHHHHH----HHHSHHHHHHH
T ss_pred HHHHHHH----HHhhhHHHHHH
Confidence 7777754 45788766543
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=86.38 E-value=23 Score=40.94 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=66.0
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEECC---
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDGVSGFHIDP--- 675 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg~~G~lv~p--- 675 (749)
+.+.+ +++..++...= +.++||.- +=-++++||+++|+|+|+-. .......+..-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSHE--SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcCc--ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 45555 67776765521 23345543 11258999999999999963 3334555555678887753
Q ss_pred ---CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH---HHHHHhCCHHHHHHHHHHHHHHh
Q 036539 676 ---YNGDESSDKIADFFEACKVDPTYWNKFSTEGL---KRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~---~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
-+.++++++|.+++ .+++ -.++.++++ +.+.++=+-..+++.+++..+.+
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 24677888886544 5541 122333333 33445556666777777655443
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=85.92 E-value=74 Score=36.82 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=42.1
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEEC------CCCHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-VDGVSGFHID------PYNGDE 680 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI-~dg~~G~lv~------p~d~e~ 680 (749)
+++..++...= +.+.||.-. | -++++||+.+|+|+|+-..-+ ....+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h~--~vg~fvtH~---G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSHR--SIGGFLSHC---G-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhccC--ccCeEEecC---C-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 66676766631 234555442 1 248999999999999964332 33333 3334565553 124567
Q ss_pred HHHHHHHHH
Q 036539 681 SSDKIADFF 689 (749)
Q Consensus 681 lA~aI~~~l 689 (749)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777775544
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=85.02 E-value=8.3 Score=42.51 Aligned_cols=103 Identities=9% Similarity=0.047 Sum_probs=64.3
Q ss_pred CCcEEEEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
++.+++..|.-.+.|. .+...+.+..+.+ .+.+++++|+..+ +| .+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~e---~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------DD---LACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------HH---HHHHHHHHHhcCCCccccccC-
Confidence 3455666665445665 3466677766654 2578888886543 11 222233333322223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ++++|... + | .+-=|-|.|+|+|+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD---S-G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD---S-A-PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 7778999999995 99999884 2 2 344567889999984
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=84.47 E-value=9.7 Score=41.48 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=63.0
Q ss_pred CCCcE-EEEEec-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 530 RKKPI-IFSMAR-LDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 530 ~~k~v-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
.++++ ++..|. ..+.|... ...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+
T Consensus 172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccC
Confidence 34444 455554 44566544 677777776542 478889987644 223333333322 122335
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+-.++..+++. +|++|..- +- .+-=|-|.|+|+|+=
T Consensus 237 ~g----~~sL~el~ali~~-a~l~I~~D---SG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AG----ETSLDEAVDLIAL-AKAVVTND---SG--LMHVAAALNRPLVAL 276 (334)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEeeC---CH--HHHHHHHcCCCEEEE
Confidence 66 6778999999995 99999884 22 444577999999983
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=83.88 E-value=2.5 Score=37.59 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=57.0
Q ss_pred EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHH--HHHHHHccCcEEEECCCCCCCc---H
Q 036539 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGE--LYRCIADTKGAFVQPALYEAFG---L 640 (749)
Q Consensus 566 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~e--l~~~la~aadvfV~PS~~E~fG---L 640 (749)
++|||+-.. ....+++.++++|. .+.++|... ...... +...+.+ +|++|++..+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888333 25778889999874 455553222 334444 8888885 99999987654443 3
Q ss_pred HHHHHHHcCCcEEEcCccccccc
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~Ei 663 (749)
+--+|-..|+|++.+...|...+
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHH
Confidence 45677888999999987666544
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=83.33 E-value=28 Score=40.29 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=48.0
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccc-ccccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAE-IIVDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~E-iI~dg~~G~lv~p 675 (749)
++....+ +++..++...= +.++||.-. |+ .+++||+++|+|+|+-...+ ... +++.-+.|+.++.
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3444556 77777766532 245666542 22 38999999999999964332 332 3444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 036539 676 ---------YNGDESSDKIADFF 689 (749)
Q Consensus 676 ---------~d~e~lA~aI~~~l 689 (749)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25677777776544
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=83.21 E-value=7.7 Score=40.12 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=59.3
Q ss_pred CCCcEEEEEecccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 530 RKKPIIFSMARLDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+++.+++..|.-.+.|... ...+.+..+.+.. ++++++|+..+ .+.+...++.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 3444666666655666644 4777877776643 78888887743 11222223333221 12577777
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. +|++|.+- +. .+-=|.|.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D---tg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND---TG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES---SH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC---Ch--HHHHHHHHhCCEEEE
Confidence 6778999999995 99999983 32 455678899999995
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth [] | Back alignment and domain information |
|---|
Probab=81.71 E-value=24 Score=37.66 Aligned_cols=151 Identities=17% Similarity=0.156 Sum_probs=87.0
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. . .-....+.++.|+. ++++++..
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-------~----hl~~~~l~~~~G~~--~~~Vpy~G-- 140 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-------D----HLAAALLAKAAGIK--FTHVPYDG-- 140 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-------H----HHHHHHHHHHHT-----EEEE-SS--
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-------H----HHHHHHHHHHhCCc--eEEEEeCC--
Confidence 466777766789999999999987543 345544443322 0 11234456677764 45555422
Q ss_pred CChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEE-c---Cccc-----------cccccccCceEEEECCC
Q 036539 613 LRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFA-T---NQGG-----------PAEIIVDGVSGFHIDPY 676 (749)
Q Consensus 613 ~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVa-t---~~GG-----------~~EiI~dg~~G~lv~p~ 676 (749)
..+.+..++....|+.+.. .-........|. -+++ + +... ..++....-.|+.++++
T Consensus 141 -~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 141 -GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp -HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred -ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 2556777777777776653 123344444453 2222 1 1111 22222334468999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 708 (749)
-+++..+++.+++++..+||+..+.+.+.+..
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 99999999999999999999988877666543
|
Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=81.56 E-value=62 Score=37.26 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=54.8
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC--
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVD-GVSGFHIDP-- 675 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~lv~p-- 675 (749)
+...+ +++..++...= +.++||.-. =-.+++||+.+|+|+|+-...+ .+..+.+ -..|+.+.+
T Consensus 319 ~v~~~----W~PQ~~vL~h~--~v~~FvtH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSHP--SVGCFVSHC----GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcCc--ccCeEEecC----CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 44555 77777776631 245676542 2358999999999999964443 4455533 356766532
Q ss_pred ---CCHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 036539 676 ---YNGDESSDKIADFFEACKVDP-TYWNKFSTEGL 707 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~ 707 (749)
-+.+++++++.+++ .++ +..+++.++++
T Consensus 389 ~~~~~~e~i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 389 TGWFSKESLRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred CCccCHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 25677888886544 553 33444444443
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=80.76 E-value=36 Score=39.19 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=54.1
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcE--EEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFAT----NQGGPAEIIVD-GVSGFHI 673 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadv--fV~PS~~E~fGLtvlEAMa~GlPVVat----~~GG~~EiI~d-g~~G~lv 673 (749)
.++...+ +++..++.. .+++ ||.- +=-++++||+++|+|+|+- |.......+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4577666 777777655 4666 5543 1234899999999999996 44445555543 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhcCCHHHHH
Q 036539 674 DP-----YNGDESSDKIADFFEACKVDPTYWN 700 (749)
Q Consensus 674 ~p-----~d~e~lA~aI~~~l~~l~~dp~~~~ 700 (749)
+. -+.++++++|.+++ .++.+++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 53 25678888885544 6655443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=80.13 E-value=49 Score=38.38 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDG-VSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg-~~G~lv~ 674 (749)
.+++...+ +++..++... . +.++||.-. | -.+++||+.+|+|+|+-.. ......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 35666666 7777776643 1 356676542 2 3489999999999999643 3344444443 5777662
Q ss_pred -----C--CCHHHHHHHHHHHH
Q 036539 675 -----P--YNGDESSDKIADFF 689 (749)
Q Consensus 675 -----p--~d~e~lA~aI~~~l 689 (749)
. -+.++++++|.+.+
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm 427 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT 427 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh
Confidence 1 14677888886554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 749 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 4e-40 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 4e-06 | ||
| 2xa1_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 1e-05 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 2e-05 | ||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 7e-04 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 9e-04 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 749 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 0.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-155 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 8e-45 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 4e-28 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 2e-26 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 4e-20 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 8e-20 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 1e-19 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 4e-16 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 2e-15 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 2e-13 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 2e-08 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 4e-08 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 6e-06 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 878 bits (2270), Expect = 0.0
Identities = 434/749 (57%), Positives = 563/749 (75%), Gaps = 4/749 (0%)
Query: 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVK 60
++ + ++ E + + R ++ G +L STQEA+V+PP VA A+RP PG WE+++
Sbjct: 44 LQQNQIIAEFEALPEQT--RKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLR 101
Query: 61 VNSDDLSVEAITVTDFLKFKELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGIS 120
VN L VE + +FL FKE + D LE+DF + S+P+ TL IGNG+
Sbjct: 102 VNLHALVVEELQPAEFLHFKEELVDG-VKNGNFTLELDFEPFNASIPRPTLHKYIGNGVD 160
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F+++ ++AKL ++ PL+ +L HQG+ LM+++ + LQ L AE L+ L
Sbjct: 161 FLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAEL 220
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240
+T Y++FE +F+E G E+GWG AERV + +R L ++L+APDP +E FL +P++FN
Sbjct: 221 KSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFN 280
Query: 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300
VVI SPHGYF Q +VLG PDTGGQVVYILDQV+ALE E+L RIKQQGL IKP+I+++TRL
Sbjct: 281 VVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRL 340
Query: 301 IPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMI 360
+PDA GT C + LE + +++ +ILRVPF+T+KGI+ +W+SRF+V+PYLE + +DA +
Sbjct: 341 LPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVEL 400
Query: 361 LEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
+ L GKPDLIIGNYSDGNLVAS++A KLG+TQ TIAHALEKTKY DSD+ WK+LD KYH
Sbjct: 401 SKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYH 460
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
FSCQF AD AMN TDFII STFQEIAGSK+ GQYESHTAFTLPGL RVV GIDV DPK
Sbjct: 461 FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPK 520
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
FNI +PGAD S+YFPYTE++RRLTKFH EIEELLY+ +N EH+ L D+KKPI+F+MAR
Sbjct: 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMAR 580
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
LD VKNL+GL EWYGKN RLR L NLV+VG +SKD EE AE+KKM+ L+E+Y+L
Sbjct: 581 LDRVKNLSGLVEWYGKNTRLRELANLVVVGG-DRRKESKDNEEKAEMKKMYDLIEEYKLN 639
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
GQ RWI++Q DR+RNGELYR I DTKGAFVQPALYEAFGLTV+EAM CGLPTFAT +GGP
Sbjct: 640 GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 699
Query: 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
AEIIV G SGFHIDPY+GD+++D +ADFF CK DP++W++ S GL+RI E YTW+IY+
Sbjct: 700 AEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYS 759
Query: 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749
++L + +Y FWK ++ +L +RY+E
Sbjct: 760 QRLLTLTGVYGFWKHVSNLDRLEARRYLE 788
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 459 bits (1184), Expect = e-155
Identities = 133/504 (26%), Positives = 219/504 (43%), Gaps = 58/504 (11%)
Query: 232 LSSLPILFNVVIFSPHGYFGQADVLGL--PDTGGQVVYILDQVKALEEELLLRIKQQGLY 289
+ + + +V +P G F AD PD GGQ+VY+ + AL E G+
Sbjct: 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAE--------MGV- 51
Query: 290 IKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYL 349
Q+ ++TR I D + + E++ + T I+R+PF DK ++ + +++PYL
Sbjct: 52 ---QVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYL 103
Query: 350 EGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDS- 408
+ E G P ++ +Y DG L ++ + G+ H+L K E
Sbjct: 104 HEYVNKIINFYRE-EGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 409 --DVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPG 466
+KE+D ++ F + IA+ + M+ D II ST QE G QY
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG------QYS-------HD 209
Query: 467 LCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526
L R ++ D KF++ PG + V+ + + K +E L +
Sbjct: 210 LYRGAVNVED-DDKFSVIPPGVNTRVFDGEYGDKIK-AKITKYLERDLGS---------- 257
Query: 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGA----FFDPSKSKDRE 582
+ P I + +RLD KN GL E Y +NK L++ NLV+ F+ +E
Sbjct: 258 -ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316
Query: 583 ETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTV 642
E + K+ L++ +G++ S + Y +A F + YE FGL
Sbjct: 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELA-GCYAYLASKGSVFALTSFYEPFGLAP 375
Query: 643 IEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKF 702
+EAM GLP T GGPAEI+ G G +DP + ++ + + FE W+ +
Sbjct: 376 VEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE----SEETWSAY 431
Query: 703 STEGLKRINECYTWKIYANKMLNM 726
+G +R+ E YTW+ A L +
Sbjct: 432 QEKGKQRVEERYTWQETARGYLEV 455
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 8e-45
Identities = 73/482 (15%), Positives = 153/482 (31%), Gaps = 91/482 (18%)
Query: 244 FSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303
SP G D GG VYIL L + QG+ ++ + TR
Sbjct: 30 TSPLQQPGTGDS------GGMNVYILSTATELAK--------QGI----EVDIYTRATRP 71
Query: 304 ARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEF 363
++G E + ++ ++ + + +S+ ++ L F +
Sbjct: 72 SQG-------EIVRVAENLRVINIAA-----GPYEGLSKEELPTQLAAFTGGMLSFTRR- 118
Query: 364 LGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSC 423
DLI +Y V ++ I AH L K +++
Sbjct: 119 EKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-----SYRDDSDTPESEA 173
Query: 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNI 483
+ I + ++ D + +T +E+ ++ D + ++
Sbjct: 174 RRICEQQLVDNADVLAVNTQEEMQ---------------------DLMHHYDADPDRISV 212
Query: 484 AAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDV 543
+PGAD +Y P ++ ++ ++ + RL
Sbjct: 213 VSPGADVELYSPGNDRATERSRRE------------------LGIPLHTKVVAFVGRLQP 254
Query: 544 VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603
K L + NL ++ + + + E+ ++ ++
Sbjct: 255 FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDT------YRHMAEELGVEKRI 308
Query: 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 663
R++ + +YR AD P+ E+FGL +EA G P A GG
Sbjct: 309 RFLDPRPPSELV-AVYRA-AD---IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIA 363
Query: 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723
+ +G +G +D ++ AD D + + ++ ++W A ++
Sbjct: 364 VAEGETGLLVDGHS----PHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQL 418
Query: 724 LN 725
+
Sbjct: 419 SS 420
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-28
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 15/200 (7%)
Query: 526 YLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETA 585
+ D +KPII ++R D K + + E Y K K V L++VG +
Sbjct: 225 FDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVG---VMAHDDPEGWIY 281
Query: 586 EIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645
K + + E Y +K I + + R +D +Q ++ E FGLTV EA
Sbjct: 282 FEKTLRKIGEDYDVKVLTNLIGVHAREVN--AFQR-ASD---VILQMSIREGFGLTVTEA 335
Query: 646 MNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTE 705
M G P GG IVDG +GF + +E+ + + + P + +
Sbjct: 336 MWKGKPVIGRAVGGIKFQIVDGETGFLVRD--ANEAVEVVLYLLK----HPEVSKEMGAK 389
Query: 706 GLKRINECYTWKIYANKMLN 725
+R+ + + + + L+
Sbjct: 390 AKERVRKNFIITKHMERYLD 409
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-26
Identities = 69/471 (14%), Positives = 140/471 (29%), Gaps = 118/471 (25%)
Query: 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318
P GG V + K L ++G +I +T +P +
Sbjct: 24 PSVGGSGVVGTELGKQL--------AERGH----EIHFITSGLPFRLN-------KVYPN 64
Query: 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG 378
V S F PY A + D++ +Y+
Sbjct: 65 IY---FHEVTVNQ--------YSVFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIP 110
Query: 379 NLVASVMASKLGITQATI---AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNAT 435
+ + + +A ++ + I H + T L+ F +
Sbjct: 111 HAICAYLAKQMIGERIKIVTTLHGTDITVL----GSDPSLNNLIRFGI---------EQS 157
Query: 436 DFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVV-KGIDVLDPKFNIAAPGADQSVYF 494
D + A + I E+H + V ID
Sbjct: 158 DVVTAVSHSLIN---------ETHELVKPNKDIQTVYNFID------------------- 189
Query: 495 PYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWY 554
+ L + Y + I+ ++ VK + + + +
Sbjct: 190 --------ERVYFKRDMTQLKKE--------YGISESEKILIHISNFRKVKRVQDVVQAF 233
Query: 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR 614
K + L++VG D E I + L++ ++ ++ ++ Q +
Sbjct: 234 AKIVTEVD-AKLLLVG---------DGPEFCTILQ---LVKNLHIEDRVLFLGKQDNVA- 279
Query: 615 NGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID 674
EL ++D + + E+FGL ++EAM CG+P T GG E+I G +G+ +
Sbjct: 280 --ELL-AMSD---LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE 333
Query: 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725
+ +D+ + D + + E + + ++
Sbjct: 334 VGDTTGVADQAIQLLK----DEELHRNMGERARESVYEQFRSEKIVSQYET 380
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 4e-20
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKM 590
S+ R+ K + E + K+L++ L IVG F +I K+
Sbjct: 22 YGDFWLSVNRIYPEKRIELQLEVF---KKLQD-EKLYIVGWF--SKGDHAERYARKIMKI 75
Query: 591 HALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 650
++++ + S+ +LY + A E FGLT IEAM G
Sbjct: 76 --------APDNVKFLGSVSEEELI-DLYS-RCK---GLLCTAKDEDFGLTPIEAMASGK 122
Query: 651 PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKR 709
P A N+GG E +++ +G+ ++ + +E D + + +P +KF + +R
Sbjct: 123 PVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK----NP---DKFKKDCFRR 173
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 91.8 bits (227), Expect = 8e-20
Identities = 31/223 (13%), Positives = 57/223 (25%), Gaps = 18/223 (8%)
Query: 516 NKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDP 575
D + +G + +M R K L + + +
Sbjct: 168 TIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHE 227
Query: 576 SKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635
SK + + ++ R +Y D V +
Sbjct: 228 SKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNA-CD---VIVNCSSG 283
Query: 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK----------- 684
E FGL E G P + GG + G + I P D+
Sbjct: 284 EGFGLCSAEGAVLGKPLIISAVGGADD-YFSGDCVYKIKPSAWISVDDRDGIGGIEGIID 342
Query: 685 IADFFEACKV--DPTYWNKFSTEGLKRINECYTWKIYANKMLN 725
+ D EA D ++ + TW ++ +++
Sbjct: 343 VDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIID 385
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 1e-19
Identities = 67/466 (14%), Positives = 129/466 (27%), Gaps = 117/466 (25%)
Query: 262 GGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKH 321
GG + + +G + V T+ G +
Sbjct: 14 GGLQRDFMRIASTV--------AARGH----HVRVYTQ---SWEG-----DCPKAF---- 49
Query: 322 SNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLV 381
+++VP V + + + E D ++G L
Sbjct: 50 -ELIQVP-----------VKSHTNHGRNAEYYAWVQNHLKEH---PADRVVGFNKMPGLD 94
Query: 382 ASVMASKLGITQ-ATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIA 440
A + A L + L +Y F T + ++
Sbjct: 95 VYFAADVCYAEKVAQEKGFLYR------------LTSRYRHYAAFERATFEQGKSTKLMM 142
Query: 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQ 500
T ++IA K +F I PG
Sbjct: 143 LTDKQIA---------------------DFQKHYQTEPERFQILPPGIY----------- 170
Query: 501 RRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTE-WYGKNKR 559
+ + E ++E + G + ++ + K + E +
Sbjct: 171 --PDRKYSEQIPN--SREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPES 224
Query: 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELY 619
LR+ L +VG + +K AL EK ++ + + + ++D + EL
Sbjct: 225 LRHNTLLFVVGQ-------------DKPRKFEALAEKLGVRSNVHFFSGRND-VS--ELM 268
Query: 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI-DPYNG 678
AD + PA EA G+ ++EA+ GLP T G A I D G I +P++
Sbjct: 269 AA-AD---LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQ 324
Query: 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724
++ ++ + ++ + K
Sbjct: 325 EQLNEVLRKALT----QSPLRMAWAENARHYA-DTQDLYSLPEKAA 365
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 4e-16
Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 31/203 (15%)
Query: 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588
P+I +RL K L + + R L+IVG + ++
Sbjct: 195 TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG---------SGRYESTLR 245
Query: 589 KMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-------YEAFGLT 641
++ + ++++ + AD F PA E G+
Sbjct: 246 RLAT-----DVSQNVKFLGRLEYQDMI-NTLAA-AD---IFAMPARTRGGGLDVEGLGIV 295
Query: 642 VIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNK 701
+EA CG+P A GG E + +G ++ + D+ S+ + + + DP
Sbjct: 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLD----DPIRRAA 350
Query: 702 FSTEGLKRINECYTWKIYANKML 724
G + ++W+I ++
Sbjct: 351 MGAAGRAHVEAEWSWEIMGERLT 373
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 2e-15
Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 28/191 (14%)
Query: 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHA 592
I + R KN + L + +K ++ + L++ G + +IK
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQD-IVLLLKG---------KGPDEKKIKL--- 49
Query: 593 LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPT 652
L +K +K + ++ ++ L E+ + +V A E+ + +EA++ G+
Sbjct: 50 LAQKLGVKAEFGFVN-SNELL---EILKT-CT---LYVHAANVESEAIACLEAISVGIVP 101
Query: 653 -FATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711
A + +P N + S KI + E + + E K
Sbjct: 102 VIANSPLSATRQFALD-ERSLFEPNNAKDLSAKIDWWLE----NKLERERMQNEYAKSA- 155
Query: 712 ECYTWKIYANK 722
YT + +
Sbjct: 156 LNYTLENSVIQ 166
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-13
Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 27/198 (13%)
Query: 529 DRKKPIIFSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEI 587
R+ + + R D K + L K V ++IVG + + RE+ +
Sbjct: 205 PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVG---RGDEDELREQAGD- 260
Query: 588 KKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY-EAFGLTVIEAM 646
L G +R++ D + R AD + P L E+FG+ ++EAM
Sbjct: 261 -----------LAGHLRFLGQVDDATKA-SAMRS-AD---VYCAPHLGGESFGIVLVEAM 304
Query: 647 NCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEG 706
G A++ ++ DG +G + + D + + E D +
Sbjct: 305 AAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILE----DDQLRAGYVARA 360
Query: 707 LKRINECYTWKIYANKML 724
+R+ Y W + + +++
Sbjct: 361 SERV-HRYDWSVVSAQIM 377
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 3e-10
Identities = 26/223 (11%), Positives = 61/223 (27%), Gaps = 40/223 (17%)
Query: 502 RLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKN 557
F P+I L N ++ +K+ II R V +N L + + +
Sbjct: 218 DEYFFQPKINTTLKNYINDKR-------QKEKIILVYGRPSVKRNAFTLIVEALKIFVQK 270
Query: 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGE 617
N ++ VG G++ + +
Sbjct: 271 YDRSNEWKIISVGEKHKDIA-------------LGKGIHLNSLGKLTL-----EDYA--D 310
Query: 618 LYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYN 677
L + + + + +E + GL TN+ ++ + ++ N
Sbjct: 311 LLKR-SS---IGISLMISPHPSYPPLEMAHFGLRV-ITNKYENKDLSNWHSNIVSLEQLN 365
Query: 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720
+ IA+ + + E + + ++
Sbjct: 366 ----PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFS 404
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 79/536 (14%), Positives = 153/536 (28%), Gaps = 160/536 (29%)
Query: 121 FVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTL 180
F FV DC + + D S+ + E I+ + + + + L + L +
Sbjct: 25 FEDAFVD-----NFDC-KDVQDMPKSILSKEE---IDHIIMSKDAVSGTLRLFWT-LLSK 74
Query: 181 PKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDP-LHMEKFLSSLPILF 239
++ Q +F E + ++ R P + ++ L+
Sbjct: 75 QEEM-VQ----KFVEEVLRINYKFLMSPIKTEQR---------QPSMMTRMYIEQRDRLY 120
Query: 240 NVV-IFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELL-LRIKQQGLYIKPQIVVV 297
N +F+ + V L L + LL LR + V++
Sbjct: 121 NDNQVFAKYN-----------------VSRLQPYLKLRQALLELR--------PAKNVLI 155
Query: 298 --------TRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYL 349
T + D C + ++ F I W++
Sbjct: 156 DGVLGSGKTWVALDV----CLS---------YKVQCKMDF----KIF--WLN-------- 188
Query: 350 EGFAQDATTM-ILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDS 408
+ +LE L I N++ + +S + ++ QA + L+ YE+
Sbjct: 189 --LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 409 -----DVK----WKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESH 459
+V+ W + SC+ + T TDF+ A+T I+
Sbjct: 247 LLVLLNVQNAKAWNAFN----LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 460 T-----------AFTLPGLCRVVKGIDVLDPKFNIAA---PGADQSVYFPYTEKQRRLTK 505
LP R V + IA G + + + T
Sbjct: 303 VKSLLLKYLDCRPQDLP---REVLTTNPRRLSI-IAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 506 FHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDV---VKNLTGLTEWYGKNKR--- 559
+ L + + L+ +F L+ + W+ K
Sbjct: 359 IESSLNVL--EPAEYRKMFDRLS------VF---PPSAHIPTILLSLI--WFDVIKSDVM 405
Query: 560 -----LRN--LVN-------LVIVGAFFDPSKSKDREETAEIKKMHA-LMEKYQLK 600
L LV + I + + K K E A +H +++ Y +
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLE-LKVKLENEYA----LHRSIVDHYNIP 456
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 87/581 (14%), Positives = 162/581 (27%), Gaps = 177/581 (30%)
Query: 2 KLHDLMDELNEVIDDEDVRTQVLEGLLGYILC--STQEAVVMPPHVAFAIRPNPGFW-EF 58
L L E+ ++V +++G+LG + V + FW
Sbjct: 136 PYLKLRQALLELRPAKNV---LIDGVLG---SGKTWVALDVCLSYKVQCKMDFKIFWLNL 189
Query: 59 VKVNSDDLSVEAIT------VTDFLK----FKELVFDEDWAKDENALEVDFGAYEFSLPQ 108
NS + +E + ++ + + E + YE L
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL-- 247
Query: 109 LTL----SSSIGNGISFVSK-FVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNLNTA 163
L L ++ N + K +T + D +SLDH + L
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH------HSMTLTPD 301
Query: 164 EKLQMALIVAEVSLSTLPKDT----P---------YQKFELRFKEWGFEKGWGH-TAERV 209
E + L + LP++ P + W W H +++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT---W---DNWKHVNCDKL 355
Query: 210 RETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYIL 269
+ S VL +P K L +F +P ++ ++
Sbjct: 356 TTIIESSLNVL---EPAEYRKMFDRL------SVF-------PPSAH-IPT---ILLSLI 395
Query: 270 --DQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD-ARGTKCNQELEPIEGTKHSNILR 326
D +K+ ++ ++ + L ++ Q T IP K E E H +I+
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSL-VEKQPKESTISIPSIYLELKVKLENEY---ALHRSIV- 450
Query: 327 VPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMA 386
D Y + F D + + D ++
Sbjct: 451 -----------------DHYNIPKTFDSD------DLIPPYLDQYFYSH----------- 476
Query: 387 SKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFI-----ADTIAMNATDFIIAS 441
I H L+ ++ + L +F+ D+ A NA+ I+ +
Sbjct: 477 ---------IGHHLKNIEHPERM----TLFRMVFLDFRFLEQKIRHDSTAWNASGSIL-N 522
Query: 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQR 501
T Q++ Y+ + I DPK Y
Sbjct: 523 TLQQLK-------FYKPY--------------ICDNDPK---------------YERLVN 546
Query: 502 RLTKFHPEIEELLYNKED--------NNEHIGYLADRKKPI 534
+ F P+IEE L + E + K +
Sbjct: 547 AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 61/401 (15%), Positives = 113/401 (28%), Gaps = 99/401 (24%)
Query: 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDF---IIAST-FQEIAGSKDRP 453
H +E + +++ D F F+ + + D I++ I SKD
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA- 60
Query: 454 GQYESHTAFTLPGLC----RVVKGI--DVLDPKFN-IAAPGADQSVYFPYTEKQRRL-TK 505
S T L +V+ +VL + + +P + +Q + T+
Sbjct: 61 ---VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ-------RQPSMMTR 110
Query: 506 FHPEIEELLYNKEDNNEHIGYLADRKKPIIF---SMARLDVVKNLT--GLTEWYGKNKRL 560
+ E + LYN DN Y R +P + ++ L KN+ G+ G K
Sbjct: 111 MYIEQRDRLYN--DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL---GSGKTW 165
Query: 561 RNLVNLV-----IVGAFFDP----SKSKDREETAEIKKMHALMEKYQLKGQMR------- 604
+ V + + ++ + L+ + R
Sbjct: 166 --VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 605 -----WIAAQSDRLRNGELY-RC--IADTKGAFVQ-PALYEAFGL---TVIEAMNCGLPT 652
I A+ RL + Y C + VQ + AF L ++ +
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLN----VQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 653 FATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF---------EACKVDPTYWNKFS 703
F + + DE + + E +P
Sbjct: 280 FLSAATTTHISLDHHSMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTNP------- 327
Query: 704 TEGLKRINECYTWKIYANKMLNMGCMYSFWKQLNKGQKLAK 744
I A + + + WK +N KL
Sbjct: 328 ----------RRLSIIAESIRDGLATWDNWKHVNC-DKLTT 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 2e-08
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 628 AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD----------GVSGFHIDPYN 677
V P+ YE +G T E G+P+ TN G + D G+
Sbjct: 521 LGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKA 580
Query: 678 GDESSDKIADF-FEACKVDPTYWNKFSTEGLKRINECYTWK 717
DES +++ D+ E K + +++ WK
Sbjct: 581 PDESVEQLVDYMEEFVKKTRRQRINQR-NATEALSDLLDWK 620
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 21/109 (19%), Positives = 28/109 (25%), Gaps = 19/109 (17%)
Query: 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA 623
LV+ G + + E EI + + + I R L A
Sbjct: 189 RRLVLAG------PAWEPEYFDEITR--------RYGSTVEPIGEVGGERRLDLLASAHA 234
Query: 624 -----DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG 667
E V EA G P T G AEI+
Sbjct: 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV 283
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 6e-06
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 598 QLKGQMRWIAAQ-SDRLR-----NGELYRCI---ADTKGAFVQPALYEAFGLTVIEAMNC 648
+L+G R + + + + E R + D + P+ +E FGL +EAM
Sbjct: 82 ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCL 138
Query: 649 GLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708
G A+ GG +II + +G + + E ++ I +A ++ + +KF K
Sbjct: 139 GAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAIL---KALELSRSDLSKFRENCKK 194
Query: 709 R 709
R
Sbjct: 195 R 195
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 749 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.93 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.92 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.9 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.9 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.82 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.82 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.78 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.77 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.75 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.75 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.74 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.72 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.7 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.69 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.65 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.62 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.5 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.47 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.46 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.45 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.42 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.42 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.42 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.3 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.25 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.24 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.22 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.97 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.05 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.87 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.83 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.71 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.67 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.66 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 97.29 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.19 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.18 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 96.62 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 87.7 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 86.2 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-166 Score=1475.98 Aligned_cols=745 Identities=58% Similarity=1.009 Sum_probs=718.0
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
|++|||++||+++|++ ++.++.+|+||++|++||||||.|||||||||||||+|||+|||++||+||+||++|||+||
T Consensus 44 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (816)
T 3s28_A 44 LQQNQIIAEFEALPEQ--TRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFK 121 (816)
T ss_dssp EEEEHHHHHHTTTTTS--CGGGCCCSTHHHHHHTEEEEEECSSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh--hhcccccCcHHHHHHhhhheeecCCeEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhH
Confidence 5899999999999954 45788999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+. ++++++||+||+|||++||++++|+||||||+|||||||||||+|++++++||+||+.|+|+|++|||||||
T Consensus 122 ~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (816)
T 3s28_A 122 EELVDGV-KNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKI 200 (816)
T ss_dssp HHHHHSS-CCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTC
T ss_pred HHhcCCC-CCCCCceEEeccccccCCCCCCCcccccCcHHHHHHHHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCc
Confidence 9999995 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|||+++|+|++|+||+||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 280 (816)
T 3s28_A 201 QNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFN 280 (816)
T ss_dssp CSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCE
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCCcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+|||++|.+++|.||||||++||+|||||||++|+++|+++||+|+++|+|+|+.+++..|+.|+++.+.+.+++
T Consensus 281 i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~ 360 (816)
T 3s28_A 281 VVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSE 360 (816)
T ss_dssp EEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCS
T ss_pred EEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+++|+|+|+++..+++++|+++..+|+|+..|+..+...+....+++|||||+|++.+++++.++++++|+|+|+|.|++
T Consensus 361 gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl 440 (816)
T 3s28_A 361 YCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHAL 440 (816)
T ss_dssp SEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCC
T ss_pred CeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecc
Confidence 99999999999888889999999999999999988888888877779999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
...++..++.+|+.....|++.+++.+|+.+++.||.|||+|.++++.+.+.+++|..+.+|++|++|++++|++.+++|
T Consensus 441 ~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~k 520 (816)
T 3s28_A 441 EKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (816)
T ss_dssp HHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTT
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCC
Confidence 98888888889999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
+.|||||+|.+.|.|......++...++.++..+|++.+.++.+|++.++++++|+|+||+++.||++.|++|++++.+.
T Consensus 521 i~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~ 600 (816)
T 3s28_A 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL 600 (816)
T ss_dssp EEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH
T ss_pred EEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhh
Confidence 99999999999999988777778888899999999999999999998888999999999999999999999999999887
Q ss_pred CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcH
Q 036539 561 RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGL 640 (749)
Q Consensus 561 ~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGL 640 (749)
+++++|+|+|+|++ ..+.++++.++.+++.++++++++.++|+|+|++++.++.+++++++++++|+||+||.+|+||+
T Consensus 601 ~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfgl 679 (816)
T 3s28_A 601 RELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGL 679 (816)
T ss_dssp HHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCH
T ss_pred CCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccH
Confidence 78899999999986 67788899999999999999999999999999888888889999999976899999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 720 (749)
+++|||+||+|||+|+.||+.|++.++.+|++++|+|++++|++|.++++++..|++.+++|+++|++++.++|||+.++
T Consensus 680 vllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a 759 (816)
T 3s28_A 680 TVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYS 759 (816)
T ss_dssp HHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred HHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 721 ~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
++++++|+.||||+++++++|++++||||
T Consensus 760 ~~ll~lY~~~g~wk~vs~~~r~~~~ryle 788 (816)
T 3s28_A 760 QRLLTLTGVYGFWKHVSNLDRLEARRYLE 788 (816)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhHhhhcchhhhHHHHHHHH
Confidence 99999999999999999999999999986
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=422.61 Aligned_cols=432 Identities=28% Similarity=0.476 Sum_probs=313.1
Q ss_pred CceeEEEEEcccccCCCcc--cCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcc
Q 036539 236 PILFNVVIFSPHGYFGQAD--VLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQEL 313 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~--~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~ 313 (749)
.|.|||++++.+++|...+ +.+.|..||.+.++. +|++.|+++||+|+ |+|..........+....
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGEI 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCSE
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhhH
Confidence 4568999999999885422 245678899999999 66777899999999 888653221101122222
Q ss_pred ccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE
Q 036539 314 EPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ 393 (749)
Q Consensus 314 e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~ 393 (749)
+......++.++++|..... +..+..+|.++..+...+.+.+.+. ..+|||||+|++..++++.++++..++|+
T Consensus 73 ~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p~ 146 (499)
T 2r60_A 73 DYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLPF 146 (499)
T ss_dssp EECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCCE
T ss_pred HhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCcE
Confidence 22211246889999875431 2233445666555555555444442 24899999998776777888888899999
Q ss_pred EEEecCCcccccCC---CcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhh
Q 036539 394 ATIAHALEKTKYED---SDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRV 470 (749)
Q Consensus 394 v~t~H~l~~~k~~~---s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v 470 (749)
|++.|+........ .......+...+++......++..++.+|.||++|...++...+. .
T Consensus 147 v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-----------------~ 209 (499)
T 2r60_A 147 TFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSH-----------------D 209 (499)
T ss_dssp EEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTS-----------------G
T ss_pred EEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhh-----------------h
Confidence 99999974322110 000000111112222233456778899999999998877622111 0
Q ss_pred hcc-C----CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC-----ccCCCCCcEEEEEec
Q 036539 471 VKG-I----DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG-----YLADRKKPIIFSMAR 540 (749)
Q Consensus 471 ~~G-i----~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g-----~l~~~~k~vIl~vGR 540 (749)
..| + + ..++.|||||+|.+.|.+......+ ...++.+| + ++++++|+|+||
T Consensus 210 ~~g~~~~~~~--~~ki~vi~ngvd~~~~~~~~~~~~~---------------~~~r~~~~~~~~~~--~~~~~~i~~vGr 270 (499)
T 2r60_A 210 LYRGAVNVED--DDKFSVIPPGVNTRVFDGEYGDKIK---------------AKITKYLERDLGSE--RMELPAIIASSR 270 (499)
T ss_dssp GGTTTCCTTC--GGGEEECCCCBCTTTSSSCCCHHHH---------------HHHHHHHHHHSCGG--GTTSCEEEECSC
T ss_pred cccccccccC--CCCeEEECCCcChhhcCccchhhhH---------------HHHHHHhccccccc--CCCCcEEEEeec
Confidence 012 2 2 5689999999999988776431111 01123345 4 567889999999
Q ss_pred ccCCCCHHHHHHHHHHhHccCCC-eEEEEEeccCCCCC---CcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChH
Q 036539 541 LDVVKNLTGLTEWYGKNKRLRNL-VNLVIVGAFFDPSK---SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNG 616 (749)
Q Consensus 541 L~~~Kgl~~LieA~~~l~~~~~~-v~LvIVG~g~~~~~---~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~ 616 (749)
+.+.||++.|++|+.++.+..++ +.|+|+|++..+.. ..+.++.++.++++++++++++.++|.|+| .++.+
T Consensus 271 l~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~ 346 (499)
T 2r60_A 271 LDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQ 346 (499)
T ss_dssp CCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHH
T ss_pred CccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHH
Confidence 99999999999999998765444 58999998432100 001234455788999999999999999999 77789
Q ss_pred HHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 036539 617 ELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEAC 692 (749)
Q Consensus 617 el~~~la~aa----dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l 692 (749)
++..+|+. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++
T Consensus 347 ~~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~l---- 421 (499)
T 2r60_A 347 ELAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKA---- 421 (499)
T ss_dssp HHHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHH----
T ss_pred HHHHHHHh-cCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHH----
Confidence 99999995 9 99999999999999999999999999999999999999999999999999999999999654
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 693 KVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 693 ~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++|++.+++|+++|++++.++|||+.++++++++|+..
T Consensus 422 l~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 422 FESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 48999999999999999988899999999999998754
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=391.84 Aligned_cols=401 Identities=16% Similarity=0.148 Sum_probs=296.7
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc------C-
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC------N- 310 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~------~- 310 (749)
.|||++++.+.+| +..||.+.++. +|+++|+++||+|+ |+|+..+....... .
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 5899999988775 25799999999 77777899999999 99976544321100 0
Q ss_pred -Cccccc-cCccceEEEEecCccCCcccccccccccccc-chH-------HHHHHHHHHHHHHc--CCCceEEEEcCCCc
Q 036539 311 -QELEPI-EGTKHSNILRVPFKTDKGILHRWVSRFDVYP-YLE-------GFAQDATTMILEFL--GGKPDLIIGNYSDG 378 (749)
Q Consensus 311 -~~~e~i-~~~~~~~I~rvp~~~~~~~~~~~isr~~i~p-yl~-------~f~~~~~~~l~~~l--~~~pDIIh~h~~~~ 378 (749)
...... ....++.+++++. .. ..+..+++ +.. .|...+.+.+...+ ..+|||||+|++..
T Consensus 62 ~~~~~~~~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~ 133 (439)
T 3fro_A 62 EVQVKVSYEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 133 (439)
T ss_dssp EEEEEEEEEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG
T ss_pred ccceeeeeccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh
Confidence 000000 0223678888876 21 12223332 111 23333333333331 56999999999888
Q ss_pred hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccc
Q 036539 379 NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYES 458 (749)
Q Consensus 379 ~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~ 458 (749)
++++.++++..++|+|++.|+.....++........+.. ..+......++..++.+|.|+++|...++. . +
T Consensus 134 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~---~-- 204 (439)
T 3fro_A 134 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID---E---W-- 204 (439)
T ss_dssp HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH---T---H--
T ss_pred hhhHHHHhhccCCCEEEEecccccccCchHHhCcccccc-ccccceeeHhhhhhhhccEEEecCHHHHHH---H---h--
Confidence 888888888899999999999854332211110011100 001122245667889999999999887662 0 0
Q ss_pred ccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCc----hHHhhhhccchhhHHhhccccchhhhcCccCCCCCcE
Q 036539 459 HTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYT----EKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPI 534 (749)
Q Consensus 459 ~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~----~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~v 534 (749)
-..+++ ..++.+||||+|.+.|.|.. .... ....++.+|+ +++ ++
T Consensus 205 -----------~~~~~~--~~~i~vi~ngvd~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--~~~-~~ 253 (439)
T 3fro_A 205 -----------GFFRNF--EGKITYVFNGIDCSFWNESYLTGSRDER---------------KKSLLSKFGM--DEG-VT 253 (439)
T ss_dssp -----------HHHGGG--TTSEEECCCCCCTTTSCGGGSCSCHHHH---------------HHHHHHHHTC--CSC-EE
T ss_pred -----------hhhhhc--CCceeecCCCCCchhcCcccccchhhhh---------------HHHHHHHcCC--CCC-cE
Confidence 000123 77999999999999987752 1111 1123456777 555 99
Q ss_pred EEEEeccc-CCCCHHHHHHHHHHhHccC--CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 535 IFSMARLD-VVKNLTGLTEWYGKNKRLR--NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 535 Il~vGRL~-~~Kgl~~LieA~~~l~~~~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
|+|+||+. +.||++.+++|+.++.+.. ++++|+|+|+|+. .+.+.+++++++++ +.+.|.|
T Consensus 254 i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~l~~~~~~~~--~~~~~~g---- 317 (439)
T 3fro_A 254 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG--NVKVITE---- 317 (439)
T ss_dssp EEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH----------HHHHHHHHHHHHCT--TEEEECS----
T ss_pred EEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh----------hHHHHHHHHHhhcC--CEEEEcC----
Confidence 99999999 9999999999999998866 7999999999875 34478889999988 7788888
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll-- 393 (439)
T 3fro_A 318 MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL-- 393 (439)
T ss_dssp CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH--
Confidence 7888999999995 999999999999999999999999999999999999999887 999999999999999997655
Q ss_pred hcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 692 CKV-DPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 692 l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+ |++.+++|++++++++ ++|||+.++++++++|+.
T Consensus 394 --~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 394 --ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp --HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHT
T ss_pred --hcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHH
Confidence 5 8999999999999999 789999999999998864
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=393.33 Aligned_cols=401 Identities=19% Similarity=0.266 Sum_probs=293.5
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
.+|||++++.+++|.. .+|.+..||.+.++. +|++.|+++||+|+ |+|....... ......
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 4589999998887632 234557899999999 67777889999999 8886532110 011111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
..++.+++++.....+ .++..++.++..|...+.+...+. ..+||+||+|++..+.++.++++..++|++.+
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 1367888887654321 223334444455554444442332 22499999998766777777888889999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|+........ +..... .........++..++.+|.||++|....+. +....|++
T Consensus 152 ~h~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~g~~- 206 (438)
T 3c48_A 152 AHTLAAVKNSY----RDDSDT-PESEARRICEQQLVDNADVLAVNTQEEMQD-------------------LMHHYDAD- 206 (438)
T ss_dssp CSSCHHHHSCC--------CC-HHHHHHHHHHHHHHHHCSEEEESSHHHHHH-------------------HHHHHCCC-
T ss_pred ecCCccccccc----ccccCC-cchHHHHHHHHHHHhcCCEEEEcCHHHHHH-------------------HHHHhCCC-
Confidence 99874322110 000000 000111234566789999999999887661 11112444
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+||||+|.+.|.+...... ...++.+|+ +.++++|+++||+.+.||++.+++|+.+
T Consensus 207 -~~k~~vi~ngvd~~~~~~~~~~~~----------------~~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 207 -PDRISVVSPGADVELYSPGNDRAT----------------ERSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp -GGGEEECCCCCCTTTSCCC----C----------------HHHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred -hhheEEecCCccccccCCcccchh----------------hhhHHhcCC--CCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 678999999999998876533210 011244666 6678899999999999999999999999
Q ss_pred hHccCC--CeEEEEEec----cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEE
Q 036539 557 NKRLRN--LVNLVIVGA----FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFV 630 (749)
Q Consensus 557 l~~~~~--~v~LvIVG~----g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV 630 (749)
+.+..| +++|+|+|+ |+. .+.++++++++++.++|.|+| .++.+++..+|+. +|++|
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~g~~------------~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v 330 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGPNAT------------PDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVA 330 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEE
T ss_pred HHhhCCCcceEEEEEeCCCCCCcH------------HHHHHHHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEE
Confidence 988766 799999998 433 567888999999999999999 7778899999995 99999
Q ss_pred ECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 631 QPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 631 ~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++
T Consensus 331 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~ 406 (438)
T 3c48_A 331 VPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHA 406 (438)
T ss_dssp ECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred ECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999996654 69999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHh
Q 036539 711 NECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 711 ~~~ysw~~~a~~ll~ly~~~ 730 (749)
.+ |||+.++++++++|+..
T Consensus 407 ~~-~s~~~~~~~~~~~~~~~ 425 (438)
T 3c48_A 407 RT-FSWAATAAQLSSLYNDA 425 (438)
T ss_dssp HH-HHHHHHHHHHHHHHHHH
T ss_pred Hh-CCHHHHHHHHHHHHHHH
Confidence 77 99999999999988643
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=403.04 Aligned_cols=438 Identities=16% Similarity=0.163 Sum_probs=287.2
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc-
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI- 316 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i- 316 (749)
-|||++||...+|- -.|||...++. .|+++|+++||+|. |+++.++.-....-......+
T Consensus 9 ~MkIl~vs~E~~P~-------~K~GGLadvv~--------~L~~aL~~~G~~V~----Vi~P~Y~~~~~~~~~~~~~~~~ 69 (536)
T 3vue_A 9 HMNVVFVGAEMAPW-------SKTGGLGDVLG--------GLPPAMAANGHRVM----VISPRYDQYKDAWDTSVVAEIK 69 (536)
T ss_dssp CCEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCSCCTTCEEEEEEEEEE
T ss_pred CcEEEEEEEeccch-------hccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCchhhhhhcccceEEEEE
Confidence 48999999888753 36899888888 66777899999999 999877543211000000000
Q ss_pred --cCccceEEEEecCccCCc-ccc--ccccc------cccc------cc---hHHHH--HHHHHHHHHHc----------
Q 036539 317 --EGTKHSNILRVPFKTDKG-ILH--RWVSR------FDVY------PY---LEGFA--QDATTMILEFL---------- 364 (749)
Q Consensus 317 --~~~~~~~I~rvp~~~~~~-~~~--~~isr------~~i~------py---l~~f~--~~~~~~l~~~l---------- 364 (749)
.....+.+.+.+...-.- ++. .+..| ..++ +| .++|+ ..+..++...+
T Consensus 70 ~~~~~~~~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~ 149 (536)
T 3vue_A 70 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKG 149 (536)
T ss_dssp ETTEEEEEEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCS
T ss_pred ecCceEEEEEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhc
Confidence 000112222221110000 000 00001 0111 11 12222 12222333322
Q ss_pred -CCCceEEEEcCCCchHHHHHHHHc-------CCCcEEEEecCCccccc-CCC-----cchhh---h--c---Ccccccc
Q 036539 365 -GGKPDLIIGNYSDGNLVASVMASK-------LGITQATIAHALEKTKY-EDS-----DVKWK---E--L---DPKYHFS 422 (749)
Q Consensus 365 -~~~pDIIh~h~~~~~lva~lla~~-------~gvp~v~t~H~l~~~k~-~~s-----~~~~~---~--~---~~~y~f~ 422 (749)
.+.+||+|+|+|.+++++.+++.. .++|+|+|+|++..... +.. ...+. . + .....+.
T Consensus 150 ~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (536)
T 3vue_A 150 TYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEG 229 (536)
T ss_dssp CCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCE
T ss_pred cCCCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccc
Confidence 245789999999998888877654 37899999998743321 100 00000 0 0 0011112
Q ss_pred hhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhh
Q 036539 423 CQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRR 502 (749)
Q Consensus 423 ~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r 502 (749)
......+..+..||.|+|+|+..++.+....+.-. .+. .... ..++.+|+||||.+.|.|.++....
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~-----~l~------~~~~--~~~i~~I~NGiD~~~~~p~~d~~~~ 296 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISGIARGC-----ELD------NIMR--LTGITGIVNGMDVSEWDPSKDKYIT 296 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCS-----SSC------CCSC--CCSCEECCCCCCTTTSCTTTCSSSS
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhccccccc-----ccc------cccc--cCCeEEEECCcchhhcCCCCccccc
Confidence 23344667889999999999987774432211100 000 0011 5689999999999999886532111
Q ss_pred hhc-cchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcch
Q 036539 503 LTK-FHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDR 581 (749)
Q Consensus 503 l~~-~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ 581 (749)
... .....+.+..++....+.+|+..+++.|+|+++||+++.||++.|++|+.++.+ .+.+|+|+|.|..
T Consensus 297 ~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~------- 367 (536)
T 3vue_A 297 AKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK------- 367 (536)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH-------
T ss_pred cccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEEeccCc-------
Confidence 000 001122233334445567888778899999999999999999999999999976 4679999999865
Q ss_pred hHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 582 EETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 582 ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
.....++..+..+ .+++.+.+ ..+.+++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||++
T Consensus 368 ---~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 368 ---KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp ---HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred ---hHHHHHHHHHhhc--CCceEEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCch
Confidence 2334455555554 47899999 7778899999994 999999999999999999999999999999999999
Q ss_pred cccccCceEE----------EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 662 EIIVDGVSGF----------HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 662 EiI~dg~~G~----------lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
|+|.||++|| +++|.|+++++++|.+++. +..++ .|++|.++|+ .++|||+.+|++|+++|+..+
T Consensus 438 e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 438 DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH-hcCcH-HHHHHHHHHH---HhcCCHHHHHHHHHHHHHHhh
Confidence 9999999999 6788899999999988774 44555 5788887775 468999999999999998764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=364.16 Aligned_cols=368 Identities=18% Similarity=0.275 Sum_probs=280.2
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
++|||++++++.. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999997765 34699999999 566666 699999 8887633210 0111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCc-EEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGIT-QAT 395 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp-~v~ 395 (749)
....++.+++++.... ++. ..+...+.+.+.+ .+||+||+|..........++++.++| ++.
T Consensus 53 ~~~~~~~~~~~~~~~~-------------~~~-~~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVM-------------LPT-PTTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSC-------------CSC-HHHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEcccccc-------------ccc-hhhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 1223578888876432 111 1233333333333 389999999877644444556778887 888
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+... .|... . ......+..++.+|.|+++|....+.. ....+ .
T Consensus 116 ~~h~~~~--------~~~~~-~-----~~~~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~-~ 161 (394)
T 3okp_A 116 STHGHEV--------GWSML-P-----GSRQSLRKIGTEVDVLTYISQYTLRRF-------------------KSAFG-S 161 (394)
T ss_dssp ECCSTHH--------HHTTS-H-----HHHHHHHHHHHHCSEEEESCHHHHHHH-------------------HHHHC-S
T ss_pred Eeccchh--------hhhhc-c-----hhhHHHHHHHHhCCEEEEcCHHHHHHH-------------------HHhcC-C
Confidence 9997532 11100 0 111223456789999999998876611 11112 2
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.+++|+.
T Consensus 162 --~~~~~vi~ngv~~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 162 --HPTFEHLPSGVDVKRFTPATPEDKS----------------ATRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp --SSEEEECCCCBCTTTSCCCCHHHHH----------------HHHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred --CCCeEEecCCcCHHHcCCCCchhhH----------------HHHHhcCC--CcCceEEEEEeccccccCHHHHHHHHH
Confidence 5789999999999999874433211 12355676 677799999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~------------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~ 282 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY------------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPART 282 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT------------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCC
T ss_pred HHHhhCCCeEEEEEcCchH------------HHHHHHHH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCcc
Confidence 9988888999999999977 56677777 56778999999 7788999999995 9999999999
Q ss_pred -------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 036539 636 -------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 636 -------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 708 (749)
|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.++ .+|++.+++|++++++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l----~~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIEL----LDDPIRRAAMGAAGRA 357 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999654 4899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 036539 709 RINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 709 ~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++.++|||+.++++++++|+.
T Consensus 358 ~~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 358 HVEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHTBHHHHHHHHHHHHHS
T ss_pred HHHHhCCHHHHHHHHHHHHHH
Confidence 998899999999999998863
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=376.02 Aligned_cols=429 Identities=17% Similarity=0.150 Sum_probs=280.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCc----------
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTK---------- 308 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~---------- 308 (749)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999777652 24699999999 67777899999999 8886532210000
Q ss_pred -cCCccccc-cCccceEEEEecCccCCcccccccccc--ccccc----hHHHHHHHHHHHHHHcC--CCceEEEEcCCCc
Q 036539 309 -CNQELEPI-EGTKHSNILRVPFKTDKGILHRWVSRF--DVYPY----LEGFAQDATTMILEFLG--GKPDLIIGNYSDG 378 (749)
Q Consensus 309 -~~~~~e~i-~~~~~~~I~rvp~~~~~~~~~~~isr~--~i~py----l~~f~~~~~~~l~~~l~--~~pDIIh~h~~~~ 378 (749)
.....+.. ....++.+++++............... .-|+. +..+...+ ..+.+.+. .+|||||+|.+..
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Divh~~~~~~ 140 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVG-AEMASGLDPFWRPDVVHAHDWHA 140 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHH-HHHTTTSSTTCCCSEEEEETGGG
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHH-HHHHHHhccCCCCCEEEeeccch
Confidence 00000000 001357777776321000000000000 00110 01122222 22222222 5899999999777
Q ss_pred hHHHHHHH-HcCCCcEEEEecCCccccc-CCCcc-----hhhhcCc-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcC
Q 036539 379 NLVASVMA-SKLGITQATIAHALEKTKY-EDSDV-----KWKELDP-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSK 450 (749)
Q Consensus 379 ~lva~lla-~~~gvp~v~t~H~l~~~k~-~~s~~-----~~~~~~~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~ 450 (749)
++++.+++ +..++|+|++.|+...... ..... .+..+.. ...+......++..++.+|.||++|...++...
T Consensus 141 ~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 220 (485)
T 2qzs_A 141 GLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREIT 220 (485)
T ss_dssp TTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTT
T ss_pred hHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHh
Confidence 77777777 6789999999999742211 00000 0000000 000111123456678999999999988776221
Q ss_pred CCCCccccccccccccchhhhccCCC------CC--CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 451 DRPGQYESHTAFTLPGLCRVVKGIDV------LD--PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 451 ~~~~qye~~~~~~~p~ly~v~~Gi~~------~~--~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
+. ..|+++ .. .++.+||||+|.+.|.|...............+...-.....++
T Consensus 221 ~~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 221 EP------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp SH------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred cc------------------ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 10 012110 02 68999999999998877532100000000000000000112345
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++ ++
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~ 348 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP----------VLQEGFLAAAAEYP--GQ 348 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH----------HHHHHHHHHHHHST--TT
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch----------HHHHHHHHHHHhCC--Cc
Confidence 6777322378999999999999999999999999976 3899999999863 24677888888875 68
Q ss_pred EE-EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEE
Q 036539 603 MR-WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFH 672 (749)
Q Consensus 603 V~-flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~l 672 (749)
|. |.| . +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++
T Consensus 349 v~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l 422 (485)
T 2qzs_A 349 VGVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFV 422 (485)
T ss_dssp EEEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEE
T ss_pred EEEeCC----C-CHHHHHHHHHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEE
Confidence 86 777 4 56778999995 999999999999999999999999999999999999999998 89999
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++|++++|++|.+++. +..|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 423 ~~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 423 FEDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp ECSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 999999999999976542 22799999999999974 789999999999999864
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=374.30 Aligned_cols=430 Identities=17% Similarity=0.170 Sum_probs=280.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC-------
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ------- 311 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~------- 311 (749)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+.... .+..
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccc-cccccceeEEE
Confidence 7999999877652 24699999999 77777899999999 88865322100 0000
Q ss_pred ------ccccc-cCccceEEEEecCccCCccccc--cccc--cccccc-hH---HHHHHHHHHHHHHc--CCCceEEEEc
Q 036539 312 ------ELEPI-EGTKHSNILRVPFKTDKGILHR--WVSR--FDVYPY-LE---GFAQDATTMILEFL--GGKPDLIIGN 374 (749)
Q Consensus 312 ------~~e~i-~~~~~~~I~rvp~~~~~~~~~~--~isr--~~i~py-l~---~f~~~~~~~l~~~l--~~~pDIIh~h 374 (749)
..... ....++.+++++..... .+. .... ..-|+. .. .|.. ....+.+.+ +.+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYY--ERSGGPYLGQTGKDYPDNWKRFAALSL-AAARIGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHH--CSSSCSSBCTTSSBCTTHHHHHHHHHH-HHHHHHTTCSSSCCCSEEEEE
T ss_pred EEecCCeEEEEEEEecCceEEEEeChHHh--CCCccccCCcccccccchHHHHHHHHH-HHHHHHHHhccCCCCCEEEec
Confidence 00000 00135777777643100 000 0000 000110 01 1222 222333332 5689999999
Q ss_pred CCCchHHHHHHHHc--CCCcEEEEecCCccccc-CCCcc-----hhhhcC-cccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 375 YSDGNLVASVMASK--LGITQATIAHALEKTKY-EDSDV-----KWKELD-PKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 375 ~~~~~lva~lla~~--~gvp~v~t~H~l~~~k~-~~s~~-----~~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+..++++.++++. .++|+|++.|+...... ..... .+..+. ....+......++..++.+|.||++|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred ccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhH
Confidence 87666677777765 89999999999743211 10000 000000 00011111234567889999999999887
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
++...+. .| ++.++.+. +++ ..++.+||||+|.+.|.|...............+...-+....++.+|
T Consensus 218 ~~~~~~~--~~----g~~~~~~~----~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 285 (485)
T 1rzu_A 218 AEEILTA--EF----GMGLEGVI----GSR--AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (485)
T ss_dssp HHHTTSH--HH----HTTCHHHH----HTT--GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHhcc--cc----CcchHHHH----Hhh--cCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC
Confidence 7622110 00 00000000 012 568999999999998877542100000000000000000112345577
Q ss_pred ccCCCC-CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRK-KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~-k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ +.+ +++|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++ ++|.
T Consensus 286 ~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 286 I--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV----------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp C--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH----------HHHHHHHHHHHHTT--TTEE
T ss_pred C--CCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch----------HHHHHHHHHHHhCC--CcEE
Confidence 6 443 6799999999999999999999999976 4899999999853 24577888888875 6887
Q ss_pred -EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEEC
Q 036539 605 -WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFHID 674 (749)
Q Consensus 605 -flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~lv~ 674 (749)
|.| . +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIG----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EecC----C-CHHHHHHHHhc-CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeC
Confidence 677 3 56677899995 999999999999999999999999999999999999999998 8999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++|+++++++|.+++. +.+|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 9999999999976542 23799999999999974 789999999999999864
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=357.94 Aligned_cols=358 Identities=17% Similarity=0.232 Sum_probs=263.1
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccc
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHR 338 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~ 338 (749)
|..||.+.++. +|++.|+++||+|+ |+|...+.... ....++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEeccccccc-----
Confidence 45799999999 67777899999999 98875322100 01124555555543211
Q ss_pred cccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchH-HHHHHHHcC--CCcEEEEecCCcccccCCCcchhhhc
Q 036539 339 WVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNL-VASVMASKL--GITQATIAHALEKTKYEDSDVKWKEL 415 (749)
Q Consensus 339 ~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~l-va~lla~~~--gvp~v~t~H~l~~~k~~~s~~~~~~~ 415 (749)
.+...++...+...+.+.+.+. +||+||+|++.... .+.++++.. ++|++.+.|+........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ---ccccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 0111122223333444444443 89999999876543 444444444 599999999853211100
Q ss_pred CcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC
Q 036539 416 DPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP 495 (749)
Q Consensus 416 ~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p 495 (749)
...+ ....+..++.+|.|+++|....+... . .+.. ..++.+||||+|.+.|.+
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~-------------------~-~~~~--~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETH-------------------E-LVKP--NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHH-------------------H-HTCC--SSCEEECCCCCCTTTCCC
T ss_pred CHHH-----HHHHHHHHhhCCEEEECCHHHHHHHH-------------------H-hhCC--cccEEEecCCccHHhcCC
Confidence 0001 12345578899999999988766211 0 1111 468999999999998876
Q ss_pred CchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCC
Q 036539 496 YTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDP 575 (749)
Q Consensus 496 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~ 575 (749)
...... ++.+|+ ++++++|+++||+.+.||++.+++|+..+.+. ++++|+|+|+|+.
T Consensus 196 ~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQL-------------------KKEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHHH-------------------HHHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred cchHHH-------------------HHHcCC--CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-
Confidence 532221 133555 56788999999999999999999999999865 5699999999877
Q ss_pred CCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 576 SKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 576 ~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.+++.++++++++.++|.|+|. .+++..+|+. +|++|+||.+|+||++++|||+||+|||+|
T Consensus 253 -----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 253 -----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHHcCCCCeEEEeCc------hhhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEe
Confidence 6788999999999999999994 2468889985 999999999999999999999999999999
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 656 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.++++++++|+.
T Consensus 315 ~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 315 RVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred cCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996654 699999999999999999999999999999998864
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=353.20 Aligned_cols=372 Identities=17% Similarity=0.169 Sum_probs=259.8
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIE 317 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~ 317 (749)
.|||++++.+. ..||.+.++. .|++.|+++||+|+ +++...+.. .......+.
T Consensus 40 ~mkIl~v~~~~-----------~~GG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~----~~~~~~~~~ 92 (416)
T 2x6q_A 40 GRSFVHVNSTS-----------FGGGVAEILH--------SLVPLLRSIGIEAR----WFVIEGPTE----FFNVTKTFH 92 (416)
T ss_dssp TCEEEEEESCS-----------SSSTHHHHHH--------HHHHHHHHTTCEEE----EEECCCCHH----HHHHHHHHH
T ss_pred ccEEEEEeCCC-----------CCCCHHHHHH--------HHHHHHHhCCCeEE----EEEccCCcc----hhhhhcccc
Confidence 48999998653 3599999999 66777899999998 777542110 000000000
Q ss_pred C-ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHc-CCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 318 G-TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFL-GGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 318 ~-~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l-~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
. ..+...++++ . .....+ ......+.+.+ ..+|||||+|.+....++.+++ .++|++.
T Consensus 93 ~~~~~~~~~~~~-------------~----~~~~~~-~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~--~~~p~v~ 152 (416)
T 2x6q_A 93 NALQGNESLKLT-------------E----EMKELY-LNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYE--KKSPWLW 152 (416)
T ss_dssp HHHTTCCSCCCC-------------H----HHHHHH-HHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSC--CCSCEEE
T ss_pred eeeccccccccc-------------H----HHHHHH-HHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHH--hcCCEEE
Confidence 0 0000000000 0 000111 11122233323 2389999999877654444333 2389999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+..... ....|+ . -...+..+|.+|+++..... .+++
T Consensus 153 ~~h~~~~~~---~~~~~~------------~-~~~~~~~~~~~i~~~s~~~~------------------------~~~~ 192 (416)
T 2x6q_A 153 RCHIDLSSP---NREFWE------------F-LRRFVEKYDRYIFHLPEYVQ------------------------PELD 192 (416)
T ss_dssp ECCSCCSSC---CHHHHH------------H-HHHHHTTSSEEEESSGGGSC------------------------TTSC
T ss_pred EEccccCCc---cHHHHH------------H-HHHHHHhCCEEEEechHHHH------------------------hhCC
Confidence 999753211 001111 1 12245677776644332211 0122
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|...+.+....... ....++.+|+ ++++++|+++||+.+.||++.|++|+.
T Consensus 193 --~~~~~vi~ngvd~~~~~~~~~~~~~--------------~~~~r~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~ 254 (416)
T 2x6q_A 193 --RNKAVIMPPSIDPLSEKNVELKQTE--------------ILRILERFDV--DPEKPIITQVSRFDPWKGIFDVIEIYR 254 (416)
T ss_dssp --TTTEEECCCCBCTTSTTTSCCCHHH--------------HHHHHHHTTC--CTTSCEEEEECCCCTTSCHHHHHHHHH
T ss_pred --ccceEEeCCCCChhhhcccccChhh--------------HHHHHHHhCC--CCCCcEEEEEeccccccCHHHHHHHHH
Confidence 3689999999998777543211100 0112345676 677899999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
.+.+..|+++|+|+|+|+. .++ .+.+.++++++++++.++|.|+|+.+ ..+.+++..+|+. +|++|+||.+
T Consensus 255 ~l~~~~~~~~l~i~G~g~~----~~~---~~~~~l~~~~~~~~~~~~V~~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~ 325 (416)
T 2x6q_A 255 KVKEKIPGVQLLLVGVMAH----DDP---EGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRA-SDVILQMSIR 325 (416)
T ss_dssp HHHHHCTTCEEEEEECCCT----TCH---HHHHHHHHHHHHHTTCTTEEEEEGGG-TCCHHHHHHHHHH-CSEEEECCSS
T ss_pred HHHHhCCCeEEEEEecCcc----cch---hHHHHHHHHHHHhCCCCcEEEecccC-CCCHHHHHHHHHh-CCEEEECCCc
Confidence 9988888999999999975 011 23456788899999999999999655 4557899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 636 E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+++++++|.+++ +|++.+++|+++|++++.++||
T Consensus 326 E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~fs 399 (416)
T 2x6q_A 326 EGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKNFI 399 (416)
T ss_dssp CSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHTB
T ss_pred CCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999997 9999999996554 7999999999999999988999
Q ss_pred HHHHHHHHHHHHHH
Q 036539 716 WKIYANKMLNMGCM 729 (749)
Q Consensus 716 w~~~a~~ll~ly~~ 729 (749)
|+.++++++++|+.
T Consensus 400 ~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 400 ITKHMERYLDILNS 413 (416)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=356.98 Aligned_cols=367 Identities=16% Similarity=0.186 Sum_probs=262.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++.+..| .||.+.++. +|++.|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~~----------~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecCC----------CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 799999876543 499999999 67777899999999 8886532210
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
..++.+.++|...... ......+...+.+.+.+ .+||+||+|.+..+..+.+.++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhc---cCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 0256778877653210 01112233333333332 389999999765432211111222222222233
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhh--hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN--ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~--~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
+... .....+.+. ...++..+. .+|.|+++|....+. +....|++
T Consensus 112 ~~~~-----------~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~~~~- 158 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHY--AAFERATFEQGKSTKLMMLTDKQIAD-------------------FQKHYQTE- 158 (374)
T ss_dssp CHHH-----------HTSHHHHHH--HHHHHHHHSTTCCCEEEESCHHHHHH-------------------HHHHHCCC-
T ss_pred cchh-----------hhcHHHHHH--HHHHHHHhhccCCcEEEEcCHHHHHH-------------------HHHHhCCC-
Confidence 2210 001111111 112333343 699999999887661 11112444
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+||||+|.+.|.+......+ ...++.+|+ ++++++|+|+||+.+.||++.+++|+..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -hhheEEecCCcCHHhcCcccchhHH---------------HHHHHHhCC--CCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 6789999999999888664321111 012345676 6678899999999999999999999999
Q ss_pred hHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 557 NKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 557 l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
+.+. .++++|+|+|+|+. +.+.++++++++.++|.|+|+ .+++..+|+. +|++|+||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSC
T ss_pred hHhccCCceEEEEEcCCCH-------------HHHHHHHHHcCCCCcEEECCC------cccHHHHHHh-cCEEEecccc
Confidence 8765 46899999999864 467888999999999999994 2478999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID-PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 636 E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~-p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+|+++++++|.+++ +|++.+++|+++|++++ ++|
T Consensus 281 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~ 355 (374)
T 2iw1_A 281 EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQ 355 (374)
T ss_dssp CSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHS
T ss_pred CCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHH-HHh
Confidence 999999999999999999999999999999999999998 899999999996654 69999999999999998 578
Q ss_pred CHHHHHHHHHHHHHHh
Q 036539 715 TWKIYANKMLNMGCMY 730 (749)
Q Consensus 715 sw~~~a~~ll~ly~~~ 730 (749)
+|...++++.++++.+
T Consensus 356 ~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 356 DLYSLPEKAADIITGG 371 (374)
T ss_dssp CCSCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHh
Confidence 9999999999988754
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-39 Score=351.47 Aligned_cols=364 Identities=14% Similarity=0.186 Sum_probs=263.8
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
.++|||++++++.. +..||.+.++. .+++.|+++||+|+ +++......... ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 45689999995443 24589999999 67777889999999 888764332100 0111
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
.. + .++++|+... ..+ +.+...+...+.+.+.+. +||+||+|.+.....+.++++..++|++.
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~---~~~~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VAR---LRFGPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC----------------------CCHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------ccc---ccccHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3344443211 011 111111223333334333 89999999877655566777778999999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+.... .. .+..+ ... .+ ..++.+|.++++|....+.. ..+++
T Consensus 136 ~~h~~~~~----~~-~~~~~-------~~~-~~-~~~~~~d~ii~~s~~~~~~~---------------------~~~~~ 180 (406)
T 2gek_A 136 TFHTSTTK----SL-TLSVF-------QGI-LR-PYHEKIIGRIAVSDLARRWQ---------------------MEALG 180 (406)
T ss_dssp EECCCCCS----HH-HHHHH-------HST-TH-HHHTTCSEEEESSHHHHHHH---------------------HHHHS
T ss_pred EEcCcchh----hh-hHHHH-------HHH-HH-HHHhhCCEEEECCHHHHHHH---------------------HHhcC
Confidence 99985221 10 01110 011 11 46789999999998776511 11223
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc-cCCCCHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL-DVVKNLTGLTEWY 554 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL-~~~Kgl~~LieA~ 554 (749)
..++ +||||+|.+.|.+.... .+. +.++++|+|+||+ .+.||++.+++|+
T Consensus 181 --~~~~-vi~~~v~~~~~~~~~~~------------------------~~~--~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 181 --SDAV-EIPNGVDVASFADAPLL------------------------DGY--PREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp --SCEE-ECCCCBCHHHHHTCCCC------------------------TTC--SCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred --CCcE-EecCCCChhhcCCCchh------------------------hhc--cCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 4578 99999998766544311 111 2356899999999 9999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
.++.+..++++|+|+|+++. +.+.++++++ .++|.|+| .++..++..+|+. +|++|+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~~~-------------~~l~~~~~~~--~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~ 291 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRGDE-------------DELREQAGDL--AGHLRFLG----QVDDATKASAMRS-ADVYCAPHL 291 (406)
T ss_dssp HHHHTTSTTCEEEEESCSCH-------------HHHHHHTGGG--GGGEEECC----SCCHHHHHHHHHH-SSEEEECCC
T ss_pred HHHHHHCCCeEEEEEcCCcH-------------HHHHHHHHhc--cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCC
Confidence 99998888999999999742 4566677666 68899999 7778999999995 999999996
Q ss_pred -CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 635 -YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 635 -~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.++++++++++. +
T Consensus 292 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~ 366 (406)
T 2gek_A 292 GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL----EDDQLRAGYVARASERVH-R 366 (406)
T ss_dssp SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHGG-G
T ss_pred CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999999999999996554 799999999999999997 9
Q ss_pred CCHHHHHHHHHHHHHHh
Q 036539 714 YTWKIYANKMLNMGCMY 730 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~ 730 (749)
|||+.++++++++|+..
T Consensus 367 ~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 367 YDWSVVSAQIMRVYETV 383 (406)
T ss_dssp GBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999988753
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=345.63 Aligned_cols=360 Identities=13% Similarity=0.091 Sum_probs=260.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|.... |......
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~---g~~~~~~------ 48 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAF---GRSVHAN------ 48 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCC---SCCSCSS------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCC---Ccccccc------
Confidence 8999998654 33599999999 777778899 9999 8775432 1100000
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCc----EE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGIT----QA 394 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp----~v 394 (749)
.......... .. .+++.. .+ +...+.+.+.+. +||+||+|++.+ ..+.++++..++| .+
T Consensus 49 ---~~~~~~~~~~---~~-~~~~~~-~~-----~~~~l~~~l~~~---~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 49 ---IEEFDAQTAE---HV-RGLNEQ-GF-----YYSGLSEFIDVH---KPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp ---SEEEEHHHHH---HH-TTCCST-TC-----CHHHHHHHHHHH---CCSEEEEEECHH-HHHHHHHHGGGCCSCCEEE
T ss_pred ---cccCCccccc---cc-cccccc-cc-----hHHHHHHHHHhc---CCCEEEEcchHH-HHHHHHHHhccCCCCCcee
Confidence 0100110000 00 001100 01 011223334433 899999995443 5566666666655 34
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCC--EEEeCCHHHHhhcCCCCCccccccccccccchhhhc
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATD--FIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVK 472 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD--~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~ 472 (749)
...|..... +... .+..++.+| .+|++|....+... ..
T Consensus 112 ~~~~~~~~~--------~~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~--------------------~~ 151 (413)
T 3oy2_A 112 LYVDLVSKN--------IREN------------LWWIFSHPKVVGVMAMSKCWISDIC--------------------NY 151 (413)
T ss_dssp EEECCCSBS--------CCGG------------GGGGGGCTTEEEEEESSTHHHHHHH--------------------HT
T ss_pred eeccccchh--------hHHH------------HHHHHhccCCceEEEcCHHHHHHHH--------------------Hc
Confidence 445533110 0000 123577888 99999987766211 12
Q ss_pred cCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHH
Q 036539 473 GIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTE 552 (749)
Q Consensus 473 Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Lie 552 (749)
|+ ..++.+||||+|.+.|. .. ++.+|+....++++|+++||+.+.||++.+++
T Consensus 152 ~~---~~~~~vi~ngvd~~~~~---~~---------------------~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~ 204 (413)
T 3oy2_A 152 GC---KVPINIVSHFVDTKTIY---DA---------------------RKLVGLSEYNDDVLFLNMNRNTARKRLDIYVL 204 (413)
T ss_dssp TC---CSCEEECCCCCCCCCCT---TH---------------------HHHTTCGGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred CC---CCceEEeCCCCCHHHHH---HH---------------------HHhcCCCcccCceEEEEcCCCchhcCcHHHHH
Confidence 33 56899999999998771 11 12355522237889999999999999999999
Q ss_pred HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc-------EEEecCccCcCChHHHHHHHHcc
Q 036539 553 WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ-------MRWIAAQSDRLRNGELYRCIADT 625 (749)
Q Consensus 553 A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~-------V~flG~~~~~~~~~el~~~la~a 625 (749)
|+.++.+..++++|+|+|+|+.... ....+.+.++++++++.++ |.|.| .++.+++..+|+.
T Consensus 205 a~~~l~~~~~~~~l~ivG~g~~~~~------~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~- 273 (413)
T 3oy2_A 205 AAARFISKYPDAKVRFLCNSHHESK------FDLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDMMYNA- 273 (413)
T ss_dssp HHHHHHHHCTTCCEEEEEECCTTCS------CCHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-
T ss_pred HHHHHHHhCCCcEEEEEeCCcccch------hhHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHHHHHh-
Confidence 9999988889999999999976110 0123678888999999987 88888 7889999999995
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCce---------------EE--EECCCCHHHHHHHHHHH
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS---------------GF--HIDPYNGDESSDKIADF 688 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~---------------G~--lv~p~d~e~lA~aI~~~ 688 (749)
+|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+ |+ +++++|+++++++| ++
T Consensus 274 adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l 352 (413)
T 3oy2_A 274 CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TF 352 (413)
T ss_dssp CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HH
T ss_pred CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999887 99 99999999999999 86
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 689 FEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 689 l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+ +|++.+++|++++++++.++|||+.++++++++|+..
T Consensus 353 ~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 353 F----KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp T----TSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred h----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5 7999999999999999988999999999999998753
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=330.13 Aligned_cols=310 Identities=15% Similarity=0.105 Sum_probs=242.0
Q ss_pred eEEEEEccc--------ccCCCcccCCCC-CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc
Q 036539 239 FNVVIFSPH--------GYFGQADVLGLP-DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC 309 (749)
Q Consensus 239 ~rIvivs~h--------~~~~~~~~~g~p-~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~ 309 (749)
|||++++.+ .+|-+ | ..||.+.++. +|++.|+++||+|+ +++.......
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~~------p~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~---- 61 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISVP------PQGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG---- 61 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCSS------CSSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC----
T ss_pred cEEEEEeccccccCcccccccC------cccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC----
Confidence 899999987 32211 2 3599999999 66777889999999 8887632210
Q ss_pred CCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC
Q 036539 310 NQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL 389 (749)
Q Consensus 310 ~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~ 389 (749)
..++.+++.+ . + . .+.+.+.+ .+||+||+|.+.....+ ++..
T Consensus 62 ---------~~~~~~~~~~--~--------------~---~----~l~~~l~~---~~~Dvi~~~~~~~~~~~---~~~~ 103 (342)
T 2iuy_A 62 ---------RPGLTVVPAG--E--------------P---E----EIERWLRT---ADVDVVHDHSGGVIGPA---GLPP 103 (342)
T ss_dssp ---------STTEEECSCC--S--------------H---H----HHHHHHHH---CCCSEEEECSSSSSCST---TCCT
T ss_pred ---------CCcceeccCC--c--------------H---H----HHHHHHHh---cCCCEEEECCchhhHHH---Hhhc
Confidence 0123332111 0 0 0 22223332 38999999987754332 5678
Q ss_pred CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchh
Q 036539 390 GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR 469 (749)
Q Consensus 390 gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~ 469 (749)
++| +.+.|+..... ..+|.+|++|....+...
T Consensus 104 ~~p-v~~~h~~~~~~----------------------------~~~d~ii~~S~~~~~~~~------------------- 135 (342)
T 2iuy_A 104 GTA-FISSHHFTTRP----------------------------VNPVGCTYSSRAQRAHCG------------------- 135 (342)
T ss_dssp TCE-EEEEECSSSBC----------------------------SCCTTEEESCHHHHHHTT-------------------
T ss_pred CCC-EEEecCCCCCc----------------------------ccceEEEEcCHHHHHHHh-------------------
Confidence 999 99999873211 018999999988766111
Q ss_pred hhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH
Q 036539 470 VVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG 549 (749)
Q Consensus 470 v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~ 549 (749)
. ..++.+||||+|.+.|.+.... .+++++|+|+||+.+.||++.
T Consensus 136 -----~--~~~~~vi~ngvd~~~~~~~~~~-----------------------------~~~~~~i~~vG~~~~~Kg~~~ 179 (342)
T 2iuy_A 136 -----G--GDDAPVIPIPVDPARYRSAADQ-----------------------------VAKEDFLLFMGRVSPHKGALE 179 (342)
T ss_dssp -----C--CTTSCBCCCCBCGGGSCCSTTC-----------------------------CCCCSCEEEESCCCGGGTHHH
T ss_pred -----c--CCceEEEcCCCChhhcCccccc-----------------------------CCCCCEEEEEeccccccCHHH
Confidence 1 4578899999999887654320 235568999999999999999
Q ss_pred HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEE
Q 036539 550 LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAF 629 (749)
Q Consensus 550 LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvf 629 (749)
+++|+.++ +++|+|+|+|+. .+.+++++++++ ++|+|+| .++..++..+|+. +|++
T Consensus 180 li~a~~~~-----~~~l~i~G~g~~------------~~~l~~~~~~~~--~~v~~~g----~~~~~~l~~~~~~-adv~ 235 (342)
T 2iuy_A 180 AAAFAHAC-----GRRLVLAGPAWE------------PEYFDEITRRYG--STVEPIG----EVGGERRLDLLAS-AHAV 235 (342)
T ss_dssp HHHHHHHH-----TCCEEEESCCCC------------HHHHHHHHHHHT--TTEEECC----CCCHHHHHHHHHH-CSEE
T ss_pred HHHHHHhc-----CcEEEEEeCccc------------HHHHHHHHHHhC--CCEEEec----cCCHHHHHHHHHh-CCEE
Confidence 99999987 689999999977 567778888877 7999999 7788999999995 9999
Q ss_pred EECCC----------CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 036539 630 VQPAL----------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSGFHIDPYNGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 630 V~PS~----------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 697 (749)
|+||. .|+||++++|||+||+|||+|+.||..|++.+ +.+|+++++ |+++++++|.+ +.+
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~----l~~--- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAG----LPA--- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHT----SCC---
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHH----HHH---
Confidence 99999 89999999999999999999999999999999 999999999 99999999954 444
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 698 YWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 698 ~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++++++.++|||+.++++++++|+.
T Consensus 308 -----~~~~~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 308 -----SDEVRRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp -----HHHHHHHHHHHHBHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 778899998999999999999999874
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=314.36 Aligned_cols=346 Identities=11% Similarity=0.037 Sum_probs=225.6
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
+..|||++++++..|+. ..||.. .+. +|+++|+++||+|+ |+|+..... . .....
T Consensus 44 ~~~mrI~~v~~~~~p~~-------~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-~----~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEH-------MFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-P----KDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGGG-------CSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-H----HHHGG
T ss_pred CCCceEEEEeCCCCccc-------cccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-h----HHHHh
Confidence 34699999999887631 247764 466 77888899999999 999863210 0 00111
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-------c
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS-------K 388 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~-------~ 388 (749)
+. .... .++.....+.. .+..+...+ ..... ..+||+||++++.++..+..+.+ .
T Consensus 99 ~~---~~~~--~~~~~~~~~~~------~i~~~~~~~-----~~~~~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 FK---SFKY--VMPEEDKDFAL------QIVPFNDRY-----NRTIP--VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp GT---TSEE--CCTTCCCCCSE------EEEECSCCT-----TCCEE--ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred hh---ccce--eeccCCccccc------eeeeccccc-----ccccc--CCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 11 1111 11111100000 001110000 00000 13799999998766555444321 1
Q ss_pred CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCC--EEEeCCHHHHhhcCCCCCcccccccccccc
Q 036539 389 LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATD--FIIASTFQEIAGSKDRPGQYESHTAFTLPG 466 (749)
Q Consensus 389 ~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD--~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ 466 (749)
...+.+..+|+.+...++... ........+..++ .+|++|....+..
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~vi~~S~~~~~~l----------------- 209 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------------QYVLAESTYKYRGPQIAVFNSELLKQYF----------------- 209 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------------HHHHHHHTTSCCSCEEEEEESHHHHHHH-----------------
T ss_pred ccCcEEEEEeechhhcCccCh--------------HHHHHHHHhccCCceEEEEcCHHHHHHH-----------------
Confidence 245777778876432211110 0111233455554 5888898776621
Q ss_pred chhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc-cCCC
Q 036539 467 LCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL-DVVK 545 (749)
Q Consensus 467 ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL-~~~K 545 (749)
...|++ .+++.++|||+|.+.|.+.. .+ .++++.|+++||+ .+.|
T Consensus 210 ---~~~g~~--~~~~~~i~~g~d~~~~~~~~--------------------------~~---~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 210 ---NNKGYN--FTDEYFFQPKINTTLKNYIN--------------------------DK---RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp ---HHHTCC--CSEEEEECCCCCHHHHTTTT--------------------------SC---CCCCSEEEEEECTTCGGG
T ss_pred ---HHcCCC--CCceEEeCCCcCchhhcccc--------------------------cc---cCCCCEEEEEecCchhcc
Confidence 112443 35788999999976553310 01 2456688999997 6899
Q ss_pred CHHHHHHHHHHhHccCCC---eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHH
Q 036539 546 NLTGLTEWYGKNKRLRNL---VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCI 622 (749)
Q Consensus 546 gl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~l 622 (749)
|++.|++|++++.+..|+ ++|+|+|+++. . .++++..+|+|+| .++.+++..+|
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~------------~-------~~l~~~~~v~f~G----~~~~~~l~~~~ 312 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHK------------D-------IALGKGIHLNSLG----KLTLEDYADLL 312 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCC------------C-------EEEETTEEEEEEE----SCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCch------------h-------hhcCCcCcEEEcC----CCCHHHHHHHH
Confidence 999999999999877664 89999999866 1 2456778999999 77889999999
Q ss_pred HccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Q 036539 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 623 a~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~m 702 (749)
+. ||+||+||.+|+||++++||||||+|||++ .||..|++.++.+|++++|+|++++|++|.+++ +|++.+++
T Consensus 313 ~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~- 385 (413)
T 2x0d_A 313 KR-SSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELC----MSFNNRDV- 385 (413)
T ss_dssp HH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHH----HHTC-----
T ss_pred Hh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHH----cCHHHHHH-
Confidence 95 999999999999999999999999999995 467789999999999999999999999996654 67777766
Q ss_pred HHHHHHHHHHhCCHHHHHHH
Q 036539 703 STEGLKRINECYTWKIYANK 722 (749)
Q Consensus 703 s~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++++ ++|||+..+++
T Consensus 386 --~~~~~~-~~~~W~~~~~~ 402 (413)
T 2x0d_A 386 --DKKESS-NMMFYINEFNE 402 (413)
T ss_dssp -----CCB-SCGGGCCCC--
T ss_pred --hHHHHH-HhCCHHHHHHH
Confidence 566666 68999999877
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=285.24 Aligned_cols=340 Identities=11% Similarity=0.015 Sum_probs=235.8
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
|.|||++++ . .+||.+..+. .|+++|+++||+|+ ++|...... . ..+
T Consensus 5 m~mkIl~~~-~------------~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~ 51 (364)
T 1f0k_A 5 QGKRLMVMA-G------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLV 51 (364)
T ss_dssp --CEEEEEC-C------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHG
T ss_pred CCcEEEEEe-C------------CCccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhc
Confidence 348999997 1 1378777777 67777899999999 888652110 0 111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
. ..++.+..++.....+. ..................+.+.+.+. +||+||+|....+..+.++++..|+|++.+
T Consensus 52 ~-~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 52 P-KHGIEIDFIRISGLRGK--GIKALIAAPLRIFNAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp G-GGTCEEEECCCCCCTTC--CHHHHHTCHHHHHHHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred c-ccCCceEEecCCccCcC--ccHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 1 12466666665421100 00000000000111222333333333 899999998776666777888899999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|+.... ...+...+.+|.+++++...
T Consensus 126 ~~~~~~~----------------------~~~~~~~~~~d~v~~~~~~~------------------------------- 152 (364)
T 1f0k_A 126 EQNGIAG----------------------LTNKWLAKIATKVMQAFPGA------------------------------- 152 (364)
T ss_dssp ECSSSCC----------------------HHHHHHTTTCSEEEESSTTS-------------------------------
T ss_pred ecCCCCc----------------------HHHHHHHHhCCEEEecChhh-------------------------------
Confidence 9864210 01234566899999877310
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcE-EEEEecccCCCCHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPI-IFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~ 555 (749)
++ ++.+|+||+|.+.|.+.... +.++. ++++++ +++.||+.+.||.+.+++|+.
T Consensus 153 ~~-~~~~i~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 153 FP-NAEVVGNPVRTDVLALPLPQ----------------------QRLAG--REGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp SS-SCEECCCCCCHHHHTSCCHH----------------------HHHTT--CCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred cC-CceEeCCccchhhcccchhh----------------------hhccc--CCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 12 56799999998766442211 22444 445554 455579999999999999999
Q ss_pred HhHccCCCeE-EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 556 KNKRLRNLVN-LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 556 ~l~~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
++.+ +++ ++++|+++. +++.++++++++ ++|+|+|++ +++..+|+. +|++|+||.
T Consensus 208 ~l~~---~~~~l~i~G~~~~-------------~~l~~~~~~~~~-~~v~~~g~~------~~~~~~~~~-ad~~v~~sg 263 (364)
T 1f0k_A 208 KLGD---SVTIWHQSGKGSQ-------------QSVEQAYAEAGQ-PQHKVTEFI------DDMAAAYAW-ADVVVCRSG 263 (364)
T ss_dssp HHGG---GEEEEEECCTTCH-------------HHHHHHHHHTTC-TTSEEESCC------SCHHHHHHH-CSEEEECCC
T ss_pred HhcC---CcEEEEEcCCchH-------------HHHHHHHhhcCC-CceEEecch------hhHHHHHHh-CCEEEECCc
Confidence 9865 678 566776642 567778888887 479999954 368889994 999999983
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccc--------cccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPA--------EIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFST 704 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~--------EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~ 704 (749)
|++++|||+||+|||+++.||.. +++.+| .|++++++| +++++++| .++ |++.+++|++
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i----~~l--~~~~~~~~~~ 332 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTL----AGW--SRETLLTMAE 332 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHH----HTC--CHHHHHHHHH
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHH----Hhc--CHHHHHHHHH
Confidence 99999999999999999999864 466555 599999988 99999999 455 9999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 705 EGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 705 ~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++.+ ++|+|+.++++++++|+.
T Consensus 333 ~~~~~~-~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 333 RARAAS-IPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHTC-CTTHHHHHHHHHHHHHTT
T ss_pred HHHHhh-ccCHHHHHHHHHHHHHHH
Confidence 999987 689999999999998864
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=299.79 Aligned_cols=337 Identities=13% Similarity=0.108 Sum_probs=226.8
Q ss_pred CCceEEEEcCCCchHHHHHHHH-cCCCcEEEEecCCccccc----CCCcchhhh--cC-----cccccchhhhHHHHHhh
Q 036539 366 GKPDLIIGNYSDGNLVASVMAS-KLGITQATIAHALEKTKY----EDSDVKWKE--LD-----PKYHFSCQFIADTIAMN 433 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H~l~~~k~----~~s~~~~~~--~~-----~~y~f~~~~~~e~~a~~ 433 (749)
.+|||+|+|+|..+.++.++++ ..++++|+|+|+.....+ ...+.++.. +. ....+...+..++.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 6799999999999888888875 458999999999853333 111222210 00 00112234456777889
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEEL 513 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 513 (749)
.||.|+|+|...+...... .+.+ ..++ ||||+|.+.|.|..........-...+.+.
T Consensus 260 ~AD~ITTVS~~yA~Ei~~L-------------------l~r~--~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~ 316 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHL-------------------LKRK--PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDF 316 (725)
T ss_dssp HSSEEEESSHHHHHHHHHH-------------------TSSC--CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHH-------------------hcCC--CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHH
Confidence 9999999999887743321 1111 2233 999999999998633221111111122222
Q ss_pred hccccchhhhcCccCC-CCCcEEEEEeccc-CCCCHHHHHHHHHHhHcc-------CCCeEEEEEeccCCCC--------
Q 036539 514 LYNKEDNNEHIGYLAD-RKKPIIFSMARLD-VVKNLTGLTEWYGKNKRL-------RNLVNLVIVGAFFDPS-------- 576 (749)
Q Consensus 514 l~~~~~~~~~~g~l~~-~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~-------~~~v~LvIVG~g~~~~-------- 576 (749)
+-+ .....+++ + .++++|+.+||++ +.||++.+++|+.++... ..-+.|+|+..+....
T Consensus 317 l~~--~~~~~l~l--~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~ 392 (725)
T 3nb0_A 317 VRG--HFHGCFDF--DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQ 392 (725)
T ss_dssp HHH--HTTTCCCS--CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHH
T ss_pred HHh--hcccCCCC--CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcch
Confidence 110 00111233 3 3456677789999 799999999999998743 2337788888774310
Q ss_pred -----------------------------------CCc-chhHHH---------------------------------HH
Q 036539 577 -----------------------------------KSK-DREETA---------------------------------EI 587 (749)
Q Consensus 577 -----------------------------------~~~-d~ee~~---------------------------------~~ 587 (749)
+.+ |.++.- ..
T Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~ 472 (725)
T 3nb0_A 393 AEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDAN 472 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGG
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCc
Confidence 000 111100 11
Q ss_pred HHHHHHHHHcCCCCc------EEEecC-ccC--cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 036539 588 KKMHALMEKYQLKGQ------MRWIAA-QSD--RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG 658 (749)
Q Consensus 588 ~~l~~li~~~~L~~~------V~flG~-~~~--~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G 658 (749)
+.+...++++++.++ |.|++- .++ .+-..++..+|+ +||+||+||.+|+||++++||||||+|||+|+.|
T Consensus 473 D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~-~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 473 DLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVR-GCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHH-HCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHh-hceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 233445566777665 677752 211 111236888888 4999999999999999999999999999999999
Q ss_pred ccccccccC-------ceEEEEC---CCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 659 GPAEIIVDG-------VSGFHID---PYNGDESSDKIADFFEACK-VDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 659 G~~EiI~dg-------~~G~lv~---p~d~e~lA~aI~~~l~~l~-~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|+.|+|.++ .+|+++. +.|+++++++|.+++..+. .++..+.+|+++|++.+ ++|+|+.++++|+++|
T Consensus 552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Y 630 (725)
T 3nb0_A 552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKAR 630 (725)
T ss_dssp HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHH
T ss_pred ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Confidence 999999876 3699883 5678888888888876655 47888999999998776 7999999999999999
Q ss_pred HHhH
Q 036539 728 CMYS 731 (749)
Q Consensus 728 ~~~~ 731 (749)
+...
T Consensus 631 e~aL 634 (725)
T 3nb0_A 631 QLAL 634 (725)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-32 Score=299.72 Aligned_cols=245 Identities=12% Similarity=0.090 Sum_probs=181.1
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
++|+||.+....+.+ ..+++..++|++.+.|+..... ... ... .....++..++.+|.||++|....
T Consensus 124 ~~DvIh~~~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~---------~~~-~~~--~~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVAF-IELAKRVNPAAKLVYRASDGLS---------TIN-VAS--YIEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGGG-HHHHHHHCTTSEEEEEESSCHH---------HHT-CCH--HHHHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHHH-HHHHHHhCCCEEEEEeccchhh---------ccc-ccH--HHHHHHHHHHHhCCEEEEcCHHHH
Confidence 689999443222221 2455678999999999752200 000 000 111235567899999999998765
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+... . .. ++.+||||+|.+.|.+....
T Consensus 191 ~~~~------------------------~-~~-~i~vipngvd~~~f~~~~~~--------------------------- 217 (406)
T 2hy7_A 191 AEVV------------------------S-RD-NVFHVGHGVDHNLDQLGDPS--------------------------- 217 (406)
T ss_dssp GGCS------------------------C-ST-TEEECCCCBCTTHHHHHCSC---------------------------
T ss_pred HHHH------------------------h-cC-CEEEEcCCcChHhcCccccc---------------------------
Confidence 5111 0 02 89999999998766432100
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
...++++|+|+||+.+.||+ +..+.+..++++|+|+|+|+ ++++++.++|+|+
T Consensus 218 -~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~--------------------~~~~~l~~~V~f~ 270 (406)
T 2hy7_A 218 -PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM--------------------GRHPGYGDNVIVY 270 (406)
T ss_dssp -SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS--------------------CCCTTCCTTEEEE
T ss_pred -ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch--------------------HHhcCCCCCEEEc
Confidence 02334789999999999998 33334446789999999874 3456788999999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHH-------HcCCcEEEcCccccccccccCceEEE-ECCCCH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAM-------NCGLPTFATNQGGPAEIIVDGVSGFH-IDPYNG 678 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAM-------a~GlPVVat~~GG~~EiI~dg~~G~l-v~p~d~ 678 (749)
| .++.+++..+|+. +|++|+||..|+||++++||| +||+|||+|+. +.++.+|++ ++|+|+
T Consensus 271 G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 271 G----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNA 339 (406)
T ss_dssp C----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCH
T ss_pred C----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCH
Confidence 9 7778999999995 999999999999999999999 99999999987 677889999 999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--HHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM--GCM 729 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l--y~~ 729 (749)
+++|++|.+++ +|++ + ...++|||+.++++++++ |..
T Consensus 340 ~~la~ai~~ll----~~~~---------~-~~~~~~sw~~~a~~~~~~~~y~~ 378 (406)
T 2hy7_A 340 DSVIAAITQAL----EAPR---------V-RYRQCLNWSDTTDRVLDPRAYPE 378 (406)
T ss_dssp HHHHHHHHHHH----HCCC---------C-CCSCCCBHHHHHHHHHCGGGSGG
T ss_pred HHHHHHHHHHH----hCcc---------h-hhhhcCCHHHHHHHHHHhhcccc
Confidence 99999997655 4554 1 234789999999999998 554
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=287.69 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=154.2
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEe-ccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVG-AFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
++.+|+ ++ .++++++||+.+ ||++.+++++.++.+..|+++|+|+| +|+. .+.++++++++|+
T Consensus 368 r~~~~~--~~-~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~------------~~~l~~~~~~~~l 431 (568)
T 2vsy_A 368 RTQCGL--PE-QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEA------------DARLRAFAHAQGV 431 (568)
T ss_dssp TGGGTC--CT-TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTH------------HHHHHHHHHHTTC
T ss_pred ccccCC--CC-CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHH------------HHHHHHHHHHcCC
Confidence 355776 33 346679999999 99999999999998888999999999 6654 6788999999999
Q ss_pred C-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-------cCcc-------cccccc
Q 036539 600 K-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-------TNQG-------GPAEII 664 (749)
Q Consensus 600 ~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-------t~~G-------G~~EiI 664 (749)
. ++|+|+| .++.+++..+|+. +|+||+||.+ +||++++|||+||+|||+ |+.| |..|+|
T Consensus 432 ~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v 505 (568)
T 2vsy_A 432 DAQRLVFMP----KLPHPQYLARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN 505 (568)
T ss_dssp CGGGEEEEC----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB
T ss_pred ChhHEEeeC----CCCHHHHHHHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh
Confidence 8 9999999 7778899999995 9999999999 999999999999999999 9999 999998
Q ss_pred ccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHH
Q 036539 665 VDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI--NECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 665 ~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v--~~~ysw~~~a~~ll~ly~~ 729 (749)
.+ |+++++++|.++ .+|++.+++|++++++++ .++|||+.++++++++|+.
T Consensus 506 ~~----------~~~~la~~i~~l----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 506 VA----------DDAAFVAKAVAL----ASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp CS----------SHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred cC----------CHHHHHHHHHHH----hcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 65 899999999654 479999999999999998 6889999999999999874
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=271.70 Aligned_cols=274 Identities=13% Similarity=0.114 Sum_probs=197.3
Q ss_pred CceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+||+|... .++.+.++++..++|++.+.|+... + . .|.. +. .........+.+|.++++|...
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~---~-~~~~------~~-~~~~~~~~~~~~d~ii~~s~~~ 161 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--W---D-KYSP------YP-EEMNRQLTGVMADLHFSPTAKS 161 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--S---C-TTSS------TT-HHHHHHHHHHHCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--c---c-ccCC------Ch-hHhhhhHHhhhhheeeCCCHHH
Confidence 89999998753 3566677788899999988776511 0 0 0100 00 0111223345599999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+.. ...|++ ..++.+|+|| +|...+.+....... .++.+
T Consensus 162 ~~~~--------------------~~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~-----------------~~~~~ 202 (375)
T 3beo_A 162 ATNL--------------------QKENKD--ESRIFITGNTAIDALKTTVKETYSHP-----------------VLEKL 202 (375)
T ss_dssp HHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHCCSSCCCH-----------------HHHTT
T ss_pred HHHH--------------------HHcCCC--cccEEEECChhHhhhhhhhhhhhhHH-----------------HHHhc
Confidence 6511 122544 5689999999 786554332100000 00111
Q ss_pred CccCCCCCcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CCCCc
Q 036539 525 GYLADRKKPIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QLKGQ 602 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~~~ 602 (749)
++++.+++++||+.+. ||++.|++|+.++.+..|++++++ |+++. ..+.+.++++ +..++
T Consensus 203 ----~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~-------------~~~~~~~~~~~~~~~~ 264 (375)
T 3beo_A 203 ----GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN-------------PVVRETANDILGDYGR 264 (375)
T ss_dssp ----TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC-------------HHHHHHHHHHHTTCTT
T ss_pred ----cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC-------------HHHHHHHHHHhhccCC
Confidence 2344567899999876 999999999999987778898654 65644 1222233332 33468
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|.|+| .++..++..+|+. +|++|+|| |.+++|||+||+|||+|+ .||..|++.+| +|+++++ |++++
T Consensus 265 v~~~g----~~~~~~~~~~~~~-ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~l 332 (375)
T 3beo_A 265 IHLIE----PLDVIDFHNVAAR-SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETI 332 (375)
T ss_dssp EEEEC----CCCHHHHHHHHHT-CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHH
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHH
Confidence 99998 6667799999995 99999999 778999999999999996 59999999888 9999986 99999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++|.+++ +|++.+++|+++++++. +.|+|+.+++.+.+++
T Consensus 333 a~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 333 FSLADELL----SDKEAHDKMSKASNPYG-DGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHHHHH----HCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHT
T ss_pred HHHHHHHH----hChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHh
Confidence 99996554 79999999999998876 6899999999998865
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=276.22 Aligned_cols=315 Identities=11% Similarity=0.032 Sum_probs=209.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
..+|+||+|.+...+++.+++++. ++|++++.|.. ++.+. .|..+ + ....-...+..+|.+...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~p----fp~~~-~~~~l-p------~~~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIP----FPTPE-IFNAL-P------TYDTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSC----CCCHH-HHTTS-T------THHHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCC----CCCHH-HHhhC-c------cHHHHHHhhhccCeEEEECHH
Confidence 367999999987777777776654 79999999974 22221 11111 0 000011234567777776654
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
............-... ....+. ....| ...++.+||||||.+.|.+....... ++ ....++.+
T Consensus 190 ~~~~f~~~~~~~l~~~-~~~~~~-~~~~g---~~~~v~vip~GID~~~f~~~~~~~~~--------~~----~~~lr~~~ 252 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRVT-TRSAKS-HTAWG---KAFRTEVYPIGIEPKEIAKQAAGPLP--------PK----LAQLKAEL 252 (482)
T ss_dssp HHHHHHHHHHHHSCEE-EETTTE-EEETT---EEEEEEECCCCCCHHHHHHHHHSCCC--------HH----HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCc-cccCCe-EEECC---eEEEEEEEeccCCHHHHHHHhcCcch--------HH----HHHHHHHh
Confidence 3331100000000000 000000 00011 13578999999998877542110000 00 00012223
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc---
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY--- 597 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~--- 597 (749)
| ++++|+++||+++.||++.+++|++++.+.+| +++|+++|++.. ..-++..+..+++.+++.+.
T Consensus 253 ~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~---~~~~~~~~l~~~l~~l~~~in~~ 324 (482)
T 1uqt_A 253 K-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRHQLENEAGRINGK 324 (482)
T ss_dssp T-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc---cchHHHHHHHHHHHHHHHHHhhh
Confidence 3 57899999999999999999999999976665 478999997532 11122223445566666553
Q ss_pred -CCC--CcEEEe-cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-----cEEEcCccccccccccCc
Q 036539 598 -QLK--GQMRWI-AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-----PTFATNQGGPAEIIVDGV 668 (749)
Q Consensus 598 -~L~--~~V~fl-G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-----PVVat~~GG~~EiI~dg~ 668 (749)
+.. ..|.|+ | .++.+++..+|+ +||+||+||..||||++++|||+||+ |+|+|+.+|..+.+.
T Consensus 325 ~g~~~~~~v~~~~g----~v~~~el~~ly~-~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~--- 396 (482)
T 1uqt_A 325 YGQLGWTPLYYLNQ----HFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (482)
T ss_dssp HCBTTBCSEEEECS----CCCHHHHHHHHH-HCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---
T ss_pred cccCCCceEEEeCC----CCCHHHHHHHHH-HccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---
Confidence 222 247764 5 788999999999 59999999999999999999999997 999999988888882
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|++++|.|++++|++|.+++ ..+++.++++++++++++ ++|||+..++++++.|+.
T Consensus 397 ~g~lv~p~d~~~lA~ai~~lL---~~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 397 SALIVNPYDRDEVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQ 453 (482)
T ss_dssp TSEEECTTCHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred CeEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHh
Confidence 789999999999999997654 236788999999999998 569999999999998854
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=266.91 Aligned_cols=286 Identities=10% Similarity=0.085 Sum_probs=199.5
Q ss_pred CceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+||+|.. ..++.+.++++..|+|++.+.|++.... .|..+ .. ........+.+|.++++|...
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~------~~-~~~~~~~~~~~d~ii~~s~~~ 152 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPW------PE-EANRTLTGHLAMYHFSPTETS 152 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSST------TH-HHHHHHHHTTCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCC------ch-HhhHHHHHhhccEEEcCcHHH
Confidence 8999999976 4456667778889999999988763100 01100 00 011122245699999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+.. ...|++ ..++.+++||+ |...+.+ ...... +.. ....++.+
T Consensus 153 ~~~l--------------------~~~g~~--~~~i~vi~n~~~d~~~~~~-~~~~~~-----~~~------~~~~~~~~ 198 (384)
T 1vgv_A 153 RQNL--------------------LRENVA--DSRIFITGNTVIDALLWVR-DQVMSS-----DKL------RSELAANY 198 (384)
T ss_dssp HHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHH-HHTTTC-----HHH------HHHHHTTC
T ss_pred HHHH--------------------HHcCCC--hhhEEEeCChHHHHHHhhh-hccccc-----hhh------hHHHHHhc
Confidence 6511 123554 56899999995 4321111 000000 000 00112334
Q ss_pred C-ccCCCCC-cEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC
Q 036539 525 G-YLADRKK-PIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG 601 (749)
Q Consensus 525 g-~l~~~~k-~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 601 (749)
| + ++++ .+++++||+.+. ||++.|++|+.++.+..++++|+++++... ...+.+++++. ..+
T Consensus 199 ~~~--~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----------~~~~~l~~~~~---~~~ 263 (384)
T 1vgv_A 199 PFI--DPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVREPVNRILG---HVK 263 (384)
T ss_dssp TTC--CTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHHHHHHHT---TCT
T ss_pred ccc--CCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----------HHHHHHHHHhh---cCC
Confidence 5 4 3333 468899999876 999999999999987778899988644211 12344444432 246
Q ss_pred cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHH
Q 036539 602 QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 602 ~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
+|+|+| .++.+++..+|+. ||++|+|| |.+++|||+||+|||+|+. ||..|++.+| +|+++++ |+++
T Consensus 264 ~v~~~g----~~~~~~~~~~~~~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~ 331 (384)
T 1vgv_A 264 NVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQR 331 (384)
T ss_dssp TEEEEC----CCCHHHHHHHHHH-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHH
T ss_pred CEEEeC----CCCHHHHHHHHHh-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHH
Confidence 899988 5666899999995 99999999 4458999999999999986 9999999888 9999988 9999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
++++|.+++ +||+.+++|+++++++. +.|+|+.+++.++++|+..|
T Consensus 332 la~~i~~ll----~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 332 IVEEVTRLL----KDENEYQAMSRAHNPYG-DGQACSRILEALKNNRISLG 377 (384)
T ss_dssp HHHHHHHHH----HCHHHHHHHHSSCCTTC-CSCHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHHH----hChHHHhhhhhccCCCc-CCCHHHHHHHHHHHHHHhhc
Confidence 999996554 79999999999998875 78999999999998765443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=236.17 Aligned_cols=191 Identities=20% Similarity=0.222 Sum_probs=160.6
Q ss_pred ecCCCCCCCCC--CCch-HHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEeccc-CCCCHHHHHHHHHHhH-
Q 036539 484 AAPGADQSVYF--PYTE-KQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLD-VVKNLTGLTEWYGKNK- 558 (749)
Q Consensus 484 IpnGvD~~~f~--p~~~-~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~- 558 (749)
||||+|.+.|. |... .... ....++.+|+ +++++|+|+||+. +.||++.+++++..+.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~--------------~~~~r~~~~~---~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDER--------------KKSLLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHH--------------HHHHHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCccChhhccccccccchhhH--------------HHHHHHHcCC---CCCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 79999999998 7642 0000 0012345676 3456999999999 9999999999999997
Q ss_pred -ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE-ecCccCcCChHHHHHHHHccCcEEEECCCCC
Q 036539 559 -RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW-IAAQSDRLRNGELYRCIADTKGAFVQPALYE 636 (749)
Q Consensus 559 -~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f-lG~~~~~~~~~el~~~la~aadvfV~PS~~E 636 (749)
+..++++|+|+|+++. ++.+.+.+++++++ +|+| +| .++.+++..+|+. +|++|+||.+|
T Consensus 65 ~~~~~~~~l~i~G~~~~----------~~~~~l~~~~~~~~---~v~~~~g----~~~~~~~~~~~~~-ad~~l~ps~~e 126 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG---NVKVITE----MLSREFVRELYGS-VDFVIIPSYFE 126 (200)
T ss_dssp SGGGGGEEEEEECCBCH----------HHHHHHHHHHHHCT---TEEEECS----CCCHHHHHHHHTT-CSEEEECCSCC
T ss_pred hccCCCeEEEEECCCCh----------HHHHHHHHHHHhcC---CEEEEec----cCCHHHHHHHHHH-CCEEEECCCCC
Confidence 6678999999999862 23677888888886 8999 99 7788999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCC
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKV-DPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ys 715 (749)
+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ + |++.+++|++++++++.+ ||
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHH-TC
T ss_pred CccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999999999999999999999 999999999999999999996544 7 999999999999999977 86
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=220.54 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=141.4
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+++|+|+||+.+.||++.+++|+.+++ ..++++|+|+|+|+. .+.+.++++++++ +|.| |
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~--~v~~-g---- 61 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD------------EKKIKLLAQKLGV--KAEF-G---- 61 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT------------HHHHHHHHHHHTC--EEEC-C----
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc------------HHHHHHHHHHcCC--eEEE-e----
Confidence 568999999999999999999999985 347899999999977 6788899999987 8999 9
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEE-cCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFA-TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVa-t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++.+++..+|+. +|++|+||.+|+||++++|||+||+ |||+ ++.||..|++.++.+ +++++|+++++++|.+++
T Consensus 62 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 62 FVNSNELLEILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 7778999999995 9999999999999999999999998 9999 568899999988655 789999999999996654
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 690 EACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 690 ~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++.+++|++++++++ ++|||+.++++
T Consensus 139 ----~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 139 ----ENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp ----HCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred ----hCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 69999999999999998 89999998764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=248.46 Aligned_cols=320 Identities=10% Similarity=0.051 Sum_probs=221.6
Q ss_pred HHHHHHHHHcC-CCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHh
Q 036539 355 DATTMILEFLG-GKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAM 432 (749)
Q Consensus 355 ~~~~~l~~~l~-~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 432 (749)
..+..+....+ ..-|+|..|.+...+++.++.++ -+.++.+..|.- +|.+.+ |..+... ....-...|
T Consensus 136 ~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiP----fPs~e~-f~~Lp~~-----~r~ell~gl 205 (496)
T 3t5t_A 136 DFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIP----WPSADY-WRILPKE-----IRTGILHGM 205 (496)
T ss_dssp HHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSC----CCCHHH-HTTSCHH-----HHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCC----CCCHHH-HhhCcHh-----HHHHHHHHH
Confidence 44445555443 35689999999987777777664 468899999965 333322 1111000 001113368
Q ss_pred hhCCEEEeCCHHHHhhcCCCCCccccccccccccchh--hhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccch
Q 036539 433 NATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR--VVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHP 508 (749)
Q Consensus 433 ~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~--v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~ 508 (749)
-.+|.|...|+..+..+.+..... +|++.. ...++... ..++.++|+|||++.|.+..... +
T Consensus 206 l~~DligF~t~~y~~~Fl~~~~r~-------l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~-~------ 271 (496)
T 3t5t_A 206 LPATTIGFFADRWCRNFLESVADL-------LPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQL-P------ 271 (496)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHH-------CTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCC-C------
T ss_pred HhCCEEEEecHHHHHHHHHHHHHH-------hcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHH-H------
Confidence 899999999987765321110000 000000 00011111 23788999999999997654210 0
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC---eEEEEEeccCCCCCCcchhHHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL---VNLVIVGAFFDPSKSKDREETA 585 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~ 585 (749)
...++.+| ++++|+++||+++.||+..+++|| ++.+.+|+ +.|++||.... ...++..+
T Consensus 272 ---------~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr---~~~~~y~~ 333 (496)
T 3t5t_A 272 ---------EGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR---LYVPANAD 333 (496)
T ss_dssp ---------TTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC---TTSHHHHH
T ss_pred ---------HHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC---CCchHHHH
Confidence 11122333 578999999999999999999999 88766665 67998886432 11233334
Q ss_pred HHHHHHHHHHHcC----CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcC---CcEEEcCcc
Q 036539 586 EIKKMHALMEKYQ----LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG---LPTFATNQG 658 (749)
Q Consensus 586 ~~~~l~~li~~~~----L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~G---lPVVat~~G 658 (749)
..+++.+++.+.+ .. .|+|+| .++.+++..+|+ +||+||+||.+||||++++|||+|| .|+|+|..+
T Consensus 334 l~~~l~~lv~~in~~~g~~-~V~f~g----~v~~~el~aly~-~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 334 YVHRVETAVAEANAELGSD-TVRIDN----DNDVNHTIACFR-RADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp HHHHHHHHHHHHHHHHCTT-SEEEEE----CCCHHHHHHHHH-HCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred HHHHHHHHHHHhccccCCc-CEEEeC----CCCHHHHHHHHH-hccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 4556666666543 22 699999 678899999999 5999999999999999999999997 899999999
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 659 GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 659 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|..+.+. .+|++++|.|++++|++|.+++. .+++.++++.++.++++ .++|+...++.+++-.+
T Consensus 408 Ga~~~l~--~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 408 GAAEVLG--EYCRSVNPFDLVEQAEAISAALA---AGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TTHHHHG--GGSEEECTTBHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHHH
T ss_pred CCHHHhC--CCEEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHh
Confidence 9999883 47999999999999999987653 56788899999999998 78999999999987654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=235.91 Aligned_cols=270 Identities=12% Similarity=0.041 Sum_probs=182.6
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|.... ++.+.++++..|+|++++.|+... |..... +. .........+.+|.++++|..
T Consensus 90 ~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~---------~~~~~~---~~-~~~~~~~~~~~~~~~~~~s~~ 156 (376)
T 1v4v_A 90 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS---------GNLKEP---FP-EEANRRLTDVLTDLDFAPTPL 156 (376)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC---------SCTTSS---TT-HHHHHHHHHHHCSEEEESSHH
T ss_pred cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc---------ccccCC---Cc-hHHHHHHHHHHhceeeCCCHH
Confidence 4899999987643 455677888899998755444311 100000 00 001223455679999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+.. ...|++ ..++.+++|++ |...+.+ . + . ..++.
T Consensus 157 ~~~~l--------------------~~~g~~--~~ki~vi~n~~~d~~~~~~----~-~-~--------------~~~~~ 194 (376)
T 1v4v_A 157 AKANL--------------------LKEGKR--EEGILVTGQTGVDAVLLAA----K-L-G--------------RLPEG 194 (376)
T ss_dssp HHHHH--------------------HTTTCC--GGGEEECCCHHHHHHHHHH----H-H-C--------------CCCTT
T ss_pred HHHHH--------------------HHcCCC--cceEEEECCchHHHHhhhh----h-h-h--------------HHHHh
Confidence 66511 122554 56899999965 4211100 0 0 0 00111
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+ ++++.+++++||+...||++.+++|+.++.+..++++++++ |+++. ..+.+++++. ..++
T Consensus 195 ~----~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~-----------~~~~l~~~~~---~~~~ 256 (376)
T 1v4v_A 195 L----PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPV-----------VREAVFPVLK---GVRN 256 (376)
T ss_dssp C----CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHH-----------HHHHHHHHHT---TCTT
T ss_pred c----CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHH-----------HHHHHHHHhc---cCCC
Confidence 1 23445677899998888999999999999877788998886 54421 1344555443 2468
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|+|+| .+...++..+|+ ++|++|.|| + |+ ++|||+||+|||++ +.||..+++.++ +|++++ .|++++
T Consensus 257 v~~~g----~~g~~~~~~~~~-~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~l 324 (376)
T 1v4v_A 257 FVLLD----PLEYGSMAALMR-ASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGV 324 (376)
T ss_dssp EEEEC----CCCHHHHHHHHH-TEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHH
T ss_pred EEEEC----CCCHHHHHHHHH-hCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHH
Confidence 99998 555668999999 599999999 2 44 88999999999997 678999987655 899996 499999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++|.+ +++|++.+++|++++ +.|.|...++++.+++..
T Consensus 325 a~~i~~----ll~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 325 YRVVKG----LLENPEELSRMRKAK-----NPYGDGKAGLMVARGVAW 363 (376)
T ss_dssp HHHHHH----HHTCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHHH
T ss_pred HHHHHH----HHhChHhhhhhcccC-----CCCCCChHHHHHHHHHHH
Confidence 999965 448999999998643 456666666776666543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=205.94 Aligned_cols=151 Identities=22% Similarity=0.249 Sum_probs=133.1
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH--HcCCCCcEEEe
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME--KYQLKGQMRWI 606 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~--~~~L~~~V~fl 606 (749)
+.++++|+|+||+.+.||++.+++++.++ ++++|+|+|+++. .+.++++++ ++++.++|.|+
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~------------~~~l~~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK------------GDHAERYARKIMKIAPDNVKFL 83 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT------------TSTHHHHHHHHHHHSCTTEEEE
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc------------HHHHHHHHHhhhcccCCcEEEe
Confidence 67788999999999999999999999987 4799999999876 345777777 77888999999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~ 686 (749)
| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ +.|+++++++|.
T Consensus 84 g----~~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~ 157 (177)
T 2f9f_A 84 G----SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMK 157 (177)
T ss_dssp E----SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHH
Confidence 9 7888999999995 999999999999999999999999999999999999999999999999 999999999996
Q ss_pred HHHHHhcCCHHH-HHHHHHH
Q 036539 687 DFFEACKVDPTY-WNKFSTE 705 (749)
Q Consensus 687 ~~l~~l~~dp~~-~~~ms~~ 705 (749)
+++ +|++. +++++++
T Consensus 158 ~l~----~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 158 KVS----KNPDKFKKDCFRR 173 (177)
T ss_dssp HHH----HCTTTTHHHHHHH
T ss_pred HHH----hCHHHHHHHHHHH
Confidence 655 56664 3443333
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=228.58 Aligned_cols=207 Identities=13% Similarity=0.091 Sum_probs=158.3
Q ss_pred HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccch
Q 036539 429 TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHP 508 (749)
Q Consensus 429 ~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~ 508 (749)
+..++.+|.|++.|...++.. ...|++ ++.|++||. |.+.... +
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l--------------------~~~g~~----ki~vi~n~~----f~~~~~~--~------ 191 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKF--------------------KTFGAK----RVFSCGNLK----FICQKGK--G------ 191 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHH--------------------HTTTCC----SEEECCCGG----GCCCCCS--C------
T ss_pred HHHHHhCCEEEECCHHHHHHH--------------------HHcCCC----eEEEcCCCc----cCCCcCh--h------
Confidence 346789999999998877621 112442 899999973 2221100 0
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 588 (749)
+ .-.++++++.|+ ..||++.|++|+.++.+..|+++|+|+|+|+. ..+
T Consensus 192 -------------~------~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-----------~~~ 239 (374)
T 2xci_A 192 -------------I------KLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-----------NAK 239 (374)
T ss_dssp -------------C------CCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-----------GHH
T ss_pred -------------h------hhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-----------HHH
Confidence 0 011257777665 46899999999999988889999999998875 124
Q ss_pred HHHHHHHHcCCC--------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCC-CCCcHHHHHHHHcCCcEEEc-Ccc
Q 036539 589 KMHALMEKYQLK--------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY-EAFGLTVIEAMNCGLPTFAT-NQG 658 (749)
Q Consensus 589 ~l~~li~~~~L~--------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~-E~fGLtvlEAMa~GlPVVat-~~G 658 (749)
++.++++++++. .+|.+.|.+ +++..+|+ .+|++++||.+ |++|++++|||+||+|||++ +.+
T Consensus 240 ~l~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~-~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~ 312 (374)
T 2xci_A 240 IFEKKARDFGFKTSFFENLEGDVILVDRF------GILKELYP-VGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTH 312 (374)
T ss_dssp HHHHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGG-GEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCT
T ss_pred HHHHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHH-hCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCcc
Confidence 688888888886 467887732 47899999 49998888654 67899999999999999985 789
Q ss_pred ccccccccC-ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 659 GPAEIIVDG-VSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 659 G~~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|..|++.+. .+|++++++|+++++++|.+++ +| +.+++|+++|++++++++.
T Consensus 313 ~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 313 KVNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp TSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHhccc
Confidence 999988763 5788899999999999996655 68 8899999999999976553
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-19 Score=193.71 Aligned_cols=248 Identities=10% Similarity=0.027 Sum_probs=175.2
Q ss_pred CCCceEEEEcCCCc---hHHHHHHHH--cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEE
Q 036539 365 GGKPDLIIGNYSDG---NLVASVMAS--KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~lla~--~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
-.++|+|+.+++.. .+.+.++.+ +.++|+++.+|+++...+. ... +.. ..|+..++.||.||
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~---------~~~--~~~--~~E~~~y~~aD~Ii 138 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS---------GNF--YLM--DRTIAYYNKADVVV 138 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG---------GGG--GGH--HHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc---------cch--hhH--HHHHHHHHHCCEEE
Confidence 35899999988764 223445554 4599999999999653321 011 111 25788999999999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
+.|....+ +...+|++ ..++.++++. |... +..
T Consensus 139 ~~S~~~~~--------------------~l~~~G~~--~~ki~~~~~~-~~~~--~~~---------------------- 171 (339)
T 3rhz_A 139 APSQKMID--------------------KLRDFGMN--VSKTVVQGMW-DHPT--QAP---------------------- 171 (339)
T ss_dssp ESCHHHHH--------------------HHHHTTCC--CSEEEECCSC-CCCC--CCC----------------------
T ss_pred ECCHHHHH--------------------HHHHcCCC--cCceeecCCC-CccC--ccc----------------------
Confidence 99988776 22334664 4566444332 2110 100
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
.. .+.++++|+|+||+.+...+. ...++++|+|+|+|+. . .+
T Consensus 172 ----~~--~~~~~~~i~yaG~l~k~~~L~----------~l~~~~~f~ivG~G~~------------~----------~l 213 (339)
T 3rhz_A 172 ----MF--PAGLKREIHFPGNPERFSFVK----------EWKYDIPLKVYTWQNV------------E----------LP 213 (339)
T ss_dssp ----CC--CCEEEEEEEECSCTTTCGGGG----------GCCCSSCEEEEESCCC------------C----------CC
T ss_pred ----cc--ccCCCcEEEEeCCcchhhHHH----------hCCCCCeEEEEeCCcc------------c----------Cc
Confidence 00 033567899999999533322 1247899999999987 1 24
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFH 672 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~l 672 (749)
. +|.|+| +++.+++..+++. +|+.+++.. ..++|.+++||||||+|||+++.|+..++|.++.+|+.
T Consensus 214 ~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWI 287 (339)
T ss_dssp T-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEE
T ss_pred C-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEE
Confidence 4 899999 8889999999984 677776511 13569999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
++ +.++++++|.. + +++.+++|+++|++.. ++++|..++++.+.
T Consensus 288 ~~--~~~e~~~~i~~----l--~~~~~~~m~~na~~~a-~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 288 VK--DVEEAIMKVKN----V--NEDEYIELVKNVRSFN-PILRKGFFTRRLLT 331 (339)
T ss_dssp ES--SHHHHHHHHHH----C--CHHHHHHHHHHHHHHT-HHHHTTHHHHHHHH
T ss_pred eC--CHHHHHHHHHH----h--CHHHHHHHHHHHHHHH-HHhhccHHHHHHHH
Confidence 97 67888888853 3 5778999999999876 56777666666543
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=199.46 Aligned_cols=162 Identities=9% Similarity=0.051 Sum_probs=126.3
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
+.+.++++.|++. .|+.+.+.+++..+.+. ++++++++++... . +.+. ++.++|++.|
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~-----~------~~l~------~~~~~v~~~~-- 298 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLD-----V------SGLG------EVPANVRLES-- 298 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCC-----C------TTCC------CCCTTEEEES--
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCC-----h------hhhc------cCCCcEEEeC--
Confidence 3455678889886 78888888888887654 5777777765430 1 1111 2467999999
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPY--NGDESSD 683 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~--d~e~lA~ 683 (749)
+++ +..+|+ .+|++|.++ .+.+++|||+||+|+|++..+ +..+.+.++..|+++++. |++++++
T Consensus 299 --~~~---~~~~l~-~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ 368 (412)
T 3otg_A 299 --WVP---QAALLP-HVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSG 368 (412)
T ss_dssp --CCC---HHHHGG-GCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHH
T ss_pred --CCC---HHHHHh-cCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHH
Confidence 442 667777 599999886 248999999999999996554 478888888899999987 8999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|.++ ++||+.+++|++.+++.. +.++|+.+++.+++++.
T Consensus 369 ai~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 369 AAKRL----LAEESYRAGARAVAAEIA-AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHH----HHCHHHHHHHHHHHHHHH-HSCCHHHHHTTHHHHHC
T ss_pred HHHHH----HhCHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHhc
Confidence 99654 479999999999998876 78899999999999874
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-18 Score=186.99 Aligned_cols=163 Identities=12% Similarity=0.007 Sum_probs=119.2
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEE-EEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNL-VIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+++.+++++|++. .++.+.+.+++..+.+. +++++ +++|.+.. .+.+. .+.++|.+.|
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~------------~~~l~------~~~~~v~~~~- 289 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVT------------PAELG------ELPDNVEVHD- 289 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---C------------GGGGC------SCCTTEEEES-
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCC------------hHHhc------cCCCCeEEEe-
Confidence 3456788999998 56666665655555432 46787 56787754 11121 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+|+ .+|++|..+- +.+++|||++|+|+|++..++ ..+.+.+...|+.++++ |+++++
T Consensus 290 ---~~~~~---~~l~-~ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~ 358 (430)
T 2iyf_A 290 ---WVPQL---AILR-QADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLR 358 (430)
T ss_dssp ---SCCHH---HHHT-TCSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHH
T ss_pred ---cCCHH---HHhh-ccCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHH
Confidence 44443 5677 5999998752 379999999999999997765 46667777799999887 889999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++|.+++ +|++.++++++.+++.. +.++++.+++.++++++.
T Consensus 359 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 359 ETALALV----DDPEVARRLRRIQAEMA-QEGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHTTSCC
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHhhc
Confidence 9996554 79999999999988876 568999999999887653
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-17 Score=179.40 Aligned_cols=254 Identities=11% Similarity=0.009 Sum_probs=166.1
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+|++.....+..+.++++.+|+|++..-.+. ... ...++..+.++.|.+.....
T Consensus 92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~----------~~G------------~~nr~l~~~a~~v~~~~~~~- 148 (365)
T 3s2u_A 92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA----------VAG------------TANRSLAPIARRVCEAFPDT- 148 (365)
T ss_dssp CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS----------SCC------------HHHHHHGGGCSEEEESSTTS-
T ss_pred CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch----------hhh------------hHHHhhccccceeeeccccc-
Confidence 8999999988877888888999999987432211 000 12234556788886654211
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+ ....++.++.|.+..+.+.+.. ...++
T Consensus 149 ---------~-------------------~~~~k~~~~g~pvr~~~~~~~~------------------------~~~~~ 176 (365)
T 3s2u_A 149 ---------F-------------------PASDKRLTTGNPVRGELFLDAH------------------------ARAPL 176 (365)
T ss_dssp ---------S-------------------CC---CEECCCCCCGGGCCCTT------------------------SSCCC
T ss_pred ---------c-------------------cCcCcEEEECCCCchhhccchh------------------------hhccc
Confidence 0 0134666777877665543221 11233
Q ss_pred cCCCCCcEE-EEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 527 LADRKKPII-FSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 527 l~~~~k~vI-l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
+++++.+ ++.|++...+..+.+.+++..+... .++.++++++... .+.+.+...+.+ .++++
T Consensus 177 --~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-~~~~vi~~~G~~~------------~~~~~~~~~~~~--~~~~v 239 (365)
T 3s2u_A 177 --TGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-IRPAIRHQAGRQH------------AEITAERYRTVA--VEADV 239 (365)
T ss_dssp --TTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-TCCEEEEECCTTT------------HHHHHHHHHHTT--CCCEE
T ss_pred --CCCCcEEEEECCcCCccccchhhHHHHHhcccc-cceEEEEecCccc------------cccccceecccc--ccccc
Confidence 4455554 4456888877778888998887643 2455555544333 344555555554 46778
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCC-
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDPY- 676 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p~- 676 (749)
.|+.+ ++..+|+ +||++|.-+ -++|+.|+|++|+|+|....++. ++.+.+...|++++..
T Consensus 240 ~~f~~------dm~~~l~-~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 APFIS------DMAAAYA-WADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp ESCCS------CHHHHHH-HCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred ccchh------hhhhhhc-cceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 88544 5788888 599999764 37899999999999998765543 2345566689988765
Q ss_pred -CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 677 -NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 677 -d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++.++++|.++ ++||+.+++|++++++.. .....+.+++.++++.+
T Consensus 309 ~~~~~L~~~i~~l----l~d~~~~~~m~~~a~~~~-~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 309 TGAAELAAQLSEV----LMHPETLRSMADQARSLA-KPEATRTVVDACLEVAR 356 (365)
T ss_dssp CCHHHHHHHHHHH----HHCTHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHH----HCCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHc
Confidence 478899999654 479999999999998765 45567777777777654
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.6e-18 Score=186.48 Aligned_cols=162 Identities=13% Similarity=0.018 Sum_probs=123.7
Q ss_pred CCcEEEEEecccCCCCH-HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNL-TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl-~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
.+.+++++|++...|+. ..+++++.+. ...|+++++++|++.. .+.+. ++.++|++.|
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~------------~~~l~------~~~~~v~~~~-- 276 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH------------RALLT------DLPDNARIAE-- 276 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG------------GGGCT------TCCTTEEECC--
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc------------hhhcc------cCCCCEEEec--
Confidence 34567777998775544 7777777776 6667899999998754 11121 3568899999
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECC----CCHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDP----YNGDES 681 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p----~d~e~l 681 (749)
+++..++. + ++|++|.. +.+.+++|||++|+|+|+ ++..+..+.+.+...|.++++ .|++++
T Consensus 277 --~~~~~~ll---~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l 346 (391)
T 3tsa_A 277 --SVPLNLFL---R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQF 346 (391)
T ss_dssp --SCCGGGTG---G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHH
T ss_pred --cCCHHHHH---h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHH
Confidence 45555544 5 69999975 345799999999999999 455667788888889999998 789999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++|.+ +++||+.++++++.+++.. +..+|+.+++.++++..
T Consensus 347 ~~ai~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 347 TDSIAT----VLGDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHH----HHTCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHHHH----HHcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 999955 5589999999998888775 78999999998887643
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.6e-18 Score=185.92 Aligned_cols=287 Identities=11% Similarity=0.090 Sum_probs=182.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
.+.+.+.+. +||+||++.... .+.+.+++++.|+|++...+++.. + +.+ ..+. ........-+
T Consensus 102 ~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~rs--~---~~~-~~~~-------~~~~r~~~~~ 165 (396)
T 3dzc_A 102 GMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRT--G---NIY-SPWP-------EEGNRKLTAA 165 (396)
T ss_dssp HHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCC--S---CTT-SSTT-------HHHHHHHHHH
T ss_pred HHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc--c---ccc-cCCc-------HHHHHHHHHH
Confidence 344444443 899999987665 466678889999998754443311 1 000 0000 0011122346
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.+|.+++.|....+ +....|++ ..++.++.|. +|...+.+....... ..
T Consensus 166 ~a~~~~~~se~~~~--------------------~l~~~G~~--~~ki~vvGn~~~d~~~~~~~~~~~~~------~~-- 215 (396)
T 3dzc_A 166 LTQYHFAPTDTSRA--------------------NLLQENYN--AENIFVTGNTVIDALLAVREKIHTDM------DL-- 215 (396)
T ss_dssp TCSEEEESSHHHHH--------------------HHHHTTCC--GGGEEECCCHHHHHHHHHHHHHHHCH------HH--
T ss_pred hcCEEECCCHHHHH--------------------HHHHcCCC--cCcEEEECCcHHHHHHHhhhhcccch------hh--
Confidence 78999999987655 11234665 6789999884 443211110000000 00
Q ss_pred hhccccchhhhcCccCCCCCcEE-EEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEec-cCCCCCCcchhHHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPII-FSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGA-FFDPSKSKDREETAEIKK 589 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vI-l~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~-g~~~~~~~d~ee~~~~~~ 589 (749)
....++.+|++ +++++++ ++.+|... .|+++.+++|+.++.+.+|++++++.++ ++. ..+.
T Consensus 216 ----~~~~r~~lg~l-~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~-----------~~~~ 279 (396)
T 3dzc_A 216 ----QATLESQFPML-DASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPN-----------VREP 279 (396)
T ss_dssp ----HHHHHHTCTTC-CTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHH-----------HHHH
T ss_pred ----HHHHHHHhCcc-CCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChH-----------HHHH
Confidence 01223456632 3444554 45556543 5889999999999988778899988643 321 1222
Q ss_pred HHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCc
Q 036539 590 MHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGV 668 (749)
Q Consensus 590 l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~ 668 (749)
+.++ .+..++|.+++ .+...++..+|+ +||++|.+| | |++ +|||++|+|||++ +.++..|.+.+|
T Consensus 280 l~~~---~~~~~~v~~~~----~lg~~~~~~l~~-~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G- 345 (396)
T 3dzc_A 280 VNKL---LKGVSNIVLIE----PQQYLPFVYLMD-RAHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG- 345 (396)
T ss_dssp HHHH---TTTCTTEEEEC----CCCHHHHHHHHH-HCSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT-
T ss_pred HHHH---HcCCCCEEEeC----CCCHHHHHHHHH-hcCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC-
Confidence 3322 34457899998 666678999999 499999998 3 444 8999999999999 788888998887
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++++++ |++++++++.++ ++|++.+++|++++. .|.....++++.++.
T Consensus 346 ~~~lv~~-d~~~l~~ai~~l----l~d~~~~~~m~~~~~-----~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 346 TVKLVGT-NQQQICDALSLL----LTDPQAYQAMSQAHN-----PYGDGKACQRIADIL 394 (396)
T ss_dssp SEEECTT-CHHHHHHHHHHH----HHCHHHHHHHHTSCC-----TTCCSCHHHHHHHHH
T ss_pred ceEEcCC-CHHHHHHHHHHH----HcCHHHHHHHhhccC-----CCcCChHHHHHHHHH
Confidence 5788764 899999999654 479999999987653 465566666666543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9.2e-18 Score=184.88 Aligned_cols=156 Identities=10% Similarity=0.026 Sum_probs=105.6
Q ss_pred CCCcEEEEEecccCCC----------CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 530 RKKPIIFSMARLDVVK----------NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K----------gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
..+++++++|++...| .+..+++++.++ ++++++++++.. .+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~------------~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL------------AQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc------------hhhhc------cC
Confidence 4456788899997555 355555555443 578999888754 22222 34
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDP 675 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p 675 (749)
.++|++.| +++ +..+++ .+|++|.. +.+.+++|||+||+|+|+ ++..+..+.+.+...|+++++
T Consensus 283 ~~~v~~~~----~~~---~~~ll~-~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~ 350 (398)
T 4fzr_A 283 PEGVLAAG----QFP---LSAIMP-ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPW 350 (398)
T ss_dssp CTTEEEES----CCC---HHHHGG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-
T ss_pred CCcEEEeC----cCC---HHHHHh-hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCc
Confidence 68999999 554 455566 59999965 347899999999999999 555577888888899999988
Q ss_pred C--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 676 Y--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 676 ~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
. |+++++++|.+ +++||+.++++++.+++.. +..+|+.+++.+++
T Consensus 351 ~~~~~~~l~~ai~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 351 EQAGVESVLAACAR----IRDDSSYVGNARRLAAEMA-TLPTPADIVRLIEQ 397 (398)
T ss_dssp ------CHHHHHHH----HHHCTHHHHHHHHHHHHHT-TSCCHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc
Confidence 7 77888888855 4479999999999988876 78999999887653
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.1e-17 Score=179.90 Aligned_cols=281 Identities=12% Similarity=0.095 Sum_probs=179.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
.+.+.+.+. +||+||++.... .+.+.+++++.|+|++....++.. |.... .+.. .......-+
T Consensus 105 ~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglrs---------~~~~~---~~p~-~~~r~~~~~ 168 (403)
T 3ot5_A 105 GINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRT---------WNKYS---PFPE-EMNRQLTGV 168 (403)
T ss_dssp HHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC---------SCTTS---STTH-HHHHHHHHH
T ss_pred HHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc---------ccccc---CCcH-HHHHHHHHH
Confidence 344444443 899999997654 565678889999997654433211 11000 0000 011122345
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.+|.+++.|....+ +....|++ ..++.++.| ++|...+.+.....
T Consensus 169 ~a~~~~~~se~~~~--------------------~l~~~Gi~--~~~i~vvGn~~~D~~~~~~~~~~~------------ 214 (403)
T 3ot5_A 169 MADIHFSPTKQAKE--------------------NLLAEGKD--PATIFVTGNTAIDALKTTVQKDYH------------ 214 (403)
T ss_dssp HCSEEEESSHHHHH--------------------HHHHTTCC--GGGEEECCCHHHHHHHHHSCTTCC------------
T ss_pred hcCEEECCCHHHHH--------------------HHHHcCCC--cccEEEeCCchHHHHHhhhhhhcc------------
Confidence 58999999987655 11234665 678999987 45543222111000
Q ss_pred hhccccchhhhcCccCCCCCcEEEEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPIIFSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMH 591 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~ 591 (749)
...++.+ ++++.++++.||... .|++..+++|+.++.+.+|+++++++++... .++
T Consensus 215 -----~~~~~~l----~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--------------~~~ 271 (403)
T 3ot5_A 215 -----HPILENL----GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP--------------AVR 271 (403)
T ss_dssp -----CHHHHSC----TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH--------------HHH
T ss_pred -----hHHHHhc----cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH--------------HHH
Confidence 0001111 223345666777654 4789999999999988788999988754211 122
Q ss_pred HHHHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCce
Q 036539 592 ALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVS 669 (749)
Q Consensus 592 ~li~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~ 669 (749)
+.+++ .+..++|.++| .+...++..+|+. ||++|.+| |...+|||++|+|+|++ +.|+..|.+..| +
T Consensus 272 ~~l~~~~~~~~~v~l~~----~l~~~~~~~l~~~-ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~ 340 (403)
T 3ot5_A 272 EKAMAILGGHERIHLIE----PLDAIDFHNFLRK-SYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-T 340 (403)
T ss_dssp HHHHHHHTTCTTEEEEC----CCCHHHHHHHHHH-EEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-S
T ss_pred HHHHHHhCCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-c
Confidence 22222 34457899999 6667799999995 99999998 44448999999999998 788888888766 8
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 670 G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|+++++ |++++++++.++ ++|++.+++|++++..+. ...+++.+++.+.+
T Consensus 341 ~~lv~~-d~~~l~~ai~~l----l~~~~~~~~m~~~~~~~g-~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 341 LKLIGT-NKENLIKEALDL----LDNKESHDKMAQAANPYG-DGFAANRILAAIKS 390 (403)
T ss_dssp EEECCS-CHHHHHHHHHHH----HHCHHHHHHHHHSCCTTC-CSCHHHHHHHHHHH
T ss_pred EEEcCC-CHHHHHHHHHHH----HcCHHHHHHHHhhcCccc-CCcHHHHHHHHHHH
Confidence 999876 999999999654 479999999987654331 33444444444443
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-16 Score=173.14 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=117.7
Q ss_pred CCCcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+++++++|++... |+...+.+++..+.+. ++++++++++.. .+.+. ++.++|++.|
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~------------~~~l~------~~~~~v~~~~- 289 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLD------------ISPLG------TLPRNVRAVG- 289 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSC------------CGGGC------SCCTTEEEES-
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcC------------hhhhc------cCCCcEEEEc-
Confidence 345677888999654 4555666666666543 689999998865 11111 3568999999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccc--cccccCceEEEECCC--CHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPA--EIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~--EiI~dg~~G~lv~p~--d~e~ 680 (749)
+++. ..+++ .+|++|.. +-+.|++|||++|+|+|+ .+.++.. +.+++...|+.+++. +++.
T Consensus 290 ---~~~~---~~ll~-~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~ 358 (398)
T 3oti_A 290 ---WTPL---HTLLR-TCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADL 358 (398)
T ss_dssp ---SCCH---HHHHT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHH
T ss_pred ---cCCH---HHHHh-hCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHH
Confidence 5544 44566 59999975 345799999999999999 6778888 999998999999876 4555
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
++ + +++||++++++++.+++.. +..+|+.+++.+++++
T Consensus 359 l~----~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----R----LIGDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp HH----H----HHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HH----H----HHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 55 2 3369999999998888765 7899999999998875
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=167.26 Aligned_cols=161 Identities=12% Similarity=0.066 Sum_probs=114.4
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|+....++ +.+.+++..+.+. ++++++ +|++.. .+.+. .+.++|++.|
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~g~~~~------------~~~~~------~~~~~v~~~~- 287 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFADT--PWHVVMAIGGFLD------------PAVLG------PLPPNVEAHQ- 287 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHTTS--SCEEEEECCTTSC------------GGGGC------SCCTTEEEES-
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHhcC--CcEEEEEeCCcCC------------hhhhC------CCCCcEEEec-
Confidence 44566788898876552 3333334334332 266665 454433 11111 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-----cCccccccccccCceEEEECCC--CHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-----TNQGGPAEIIVDGVSGFHIDPY--NGDES 681 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-----t~~GG~~EiI~dg~~G~lv~p~--d~e~l 681 (749)
+++.. .+++ ++|++|..+- ..|++|||++|+|+|+ .+..+..+.+.+...|..++++ +++++
T Consensus 288 ---~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 288 ---WIPFH---SVLA-HARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp ---CCCHH---HHHT-TEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHH
T ss_pred ---CCCHH---HHHh-hCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHH
Confidence 44443 6777 5999998863 3789999999999995 4445677888888899999876 78999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++|.+ +++|++.++++++.+.+.. +..+++.+++.++++++
T Consensus 357 ~~~~~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 357 REAVER----LAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHH----HHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHh
Confidence 999855 4479999999988887765 77899999999988764
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-14 Score=158.66 Aligned_cols=161 Identities=11% Similarity=0.005 Sum_probs=112.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|+....++ +.+..++..+.+. + +++++ +|.+.. .+.+. .+.++|++.|
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~-~-~~~v~~~g~~~~------------~~~l~------~~~~~v~~~~- 303 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDGQ-P-WHVVMTLGGQVD------------PAALG------DLPPNVEAHR- 303 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHHTTS-S-CEEEEECTTTSC------------GGGGC------CCCTTEEEES-
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHHhcC-C-cEEEEEeCCCCC------------hHHhc------CCCCcEEEEe-
Confidence 34556778898865432 3333333333332 3 77777 454433 11111 3567999999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+++ .+|++|..+- ..|++|||++|+|+|+ .+.....+.+.+...|..+++. ++++++
T Consensus 304 ---~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~ 372 (415)
T 3rsc_A 304 ---WVPHV---KVLE-QATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLL 372 (415)
T ss_dssp ---CCCHH---HHHH-HEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHH
T ss_pred ---cCCHH---HHHh-hCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHH
Confidence 55544 5666 5999998752 3689999999999999 4555567777887899999876 788999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+ +++|++.++++++.+.+.. +...++.+++.++++++
T Consensus 373 ~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 373 AAVGA----VAADPALLARVEAMRGHVR-RAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHH----HHTCHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHH----HHcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 99854 5589999999988877765 77999999998888764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=159.14 Aligned_cols=157 Identities=13% Similarity=0.116 Sum_probs=114.6
Q ss_pred CCcEEEEEecccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 531 KKPIIFSMARLDVV-------KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 531 ~k~vIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
...+++++|++... +.+..+++++.++ ++++++++++.. .+.+. . +.++|
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~------------~~~l~----~--~~~~v 266 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTV------------AEALR----A--EVPQA 266 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHH------------HHHHH----H--HCTTS
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCC------------HHhhC----C--CCCce
Confidence 34578889999875 5677777777643 578888766532 22232 1 35789
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--C
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--N 677 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d 677 (749)
.+ | +++..+ +++ ++|++|..+ -+.|++|||++|+|+|+...++ ..+.+.+...|+.+++. +
T Consensus 267 ~~-~----~~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~ 333 (384)
T 2p6p_A 267 RV-G----WTPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDS 333 (384)
T ss_dssp EE-E----CCCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCC
T ss_pred EE-c----CCCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCC
Confidence 99 9 555544 456 599999974 3469999999999999987654 66777777789999875 6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++++|.+++ +|+++++++++.+.+.. ..-.-+.+++.+..+..
T Consensus 334 ~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 334 TEAIADSCQELQ----AKDTYARRAQDLSREIS-GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHhh
Confidence 889999986544 79999999988887665 55577777777766543
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.50 E-value=3e-13 Score=151.26 Aligned_cols=157 Identities=10% Similarity=0.015 Sum_probs=116.0
Q ss_pred CcEEEEEecccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 532 KPIIFSMARLDV-----VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 532 k~vIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
..+++++|++.. .|.+..+++++..+ ++++++++++.. .+.+. ++.++|++.
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~------------~~~l~------~~~~~v~~~ 324 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQ------------LEGVA------NIPDNVRTV 324 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTT------------TSSCS------SCCSSEEEC
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcc------------hhhhc------cCCCCEEEe
Confidence 457788899875 48888889988654 478888777644 11111 356789999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~ 680 (749)
| +++..++ ++ ++|++|.. +-+.|++|||++|+|+|+...++ ..+.+.+...|+.+++. ++++
T Consensus 325 ~----~~~~~~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 392 (441)
T 2yjn_A 325 G----FVPMHAL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQ 392 (441)
T ss_dssp C----SCCHHHH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHH
T ss_pred c----CCCHHHH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHH
Confidence 9 5665444 56 59999985 34579999999999999997743 56677777799999876 7889
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++|.++ ++|+++++++++.+.+.. +...++.+++.++++++
T Consensus 393 l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 393 LRESVKRV----LDDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHH----HHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH----hcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 99998654 479999999988887665 68899999999888754
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=160.81 Aligned_cols=333 Identities=14% Similarity=0.035 Sum_probs=206.7
Q ss_pred CceEEEEcCCCchHHHH-HHHHc--------------CCCcEEEEecCCcccc---cCCCcc--------------hhhh
Q 036539 367 KPDLIIGNYSDGNLVAS-VMASK--------------LGITQATIAHALEKTK---YEDSDV--------------KWKE 414 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~-lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~--------------~~~~ 414 (749)
+||+||+|.+.++++.. ++... .+.+.++|.|++...- |+...+ .+..
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999877655 44222 2456899999985432 221100 0000
Q ss_pred cC-------------c-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 415 LD-------------P-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 415 ~~-------------~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
+. . ...+..++..-..++..|+.|-+||..-.+.++... + ++++ ...+.|
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~--f--------~~~~------~~~p~k 432 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAET--L--------ADWY------ALWPEK 432 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTT--T--------HHHH------HHCGGG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhh--h--------hhHH------HcCccc
Confidence 00 0 000111344456788999999999987666443210 0 1122 123668
Q ss_pred eEEecCCCCCCCCC----CCchHH--h------------hhhccch---h------h-HHhhccccc----hhhhcCccC
Q 036539 481 FNIAAPGADQSVYF----PYTEKQ--R------------RLTKFHP---E------I-EELLYNKED----NNEHIGYLA 528 (749)
Q Consensus 481 i~VIpnGvD~~~f~----p~~~~~--~------------rl~~~~~---~------~-~~~l~~~~~----~~~~~g~l~ 528 (749)
++=|.||||...|- |....- . .+.++.+ . + +.+.-++.. .+++.|+..
T Consensus 433 f~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 512 (796)
T 2c4m_A 433 FNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512 (796)
T ss_dssp EEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999883 321100 0 0001101 0 1 112222333 356678877
Q ss_pred CCCCcEEEEEecccCCCCHHH-HHHHHHHhHc--cC-----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH----H
Q 036539 529 DRKKPIIFSMARLDVVKNLTG-LTEWYGKNKR--LR-----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALME----K 596 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~--~~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~----~ 596 (749)
+++.+.++++.|+..+|+.+. ++..+.++.+ .. .++++++.|.+.. .+......++.+..+++ .
T Consensus 513 dpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~d 588 (796)
T 2c4m_A 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAP----GYVRAKAIIKLINSIADLVNND 588 (796)
T ss_dssp CTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCH----hHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999999 7888777653 22 2588988888865 23333334444555555 1
Q ss_pred cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceE
Q 036539 597 YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSG 670 (749)
Q Consensus 597 ~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G 670 (749)
-...+ +|.|+. ..+. .+.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.++ ..||
T Consensus 589 p~~~~~lKVvFl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 663 (796)
T 2c4m_A 589 PEVSPLLKVVFVE----NYNV-SPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENA 663 (796)
T ss_dssp TTTTTTEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcE
Confidence 13456 788886 4444 455555557999999999 99999999999999999999999999888755 4699
Q ss_pred EEECC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 671 FHIDP--YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 671 ~lv~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
|.|.. .++.++-.. .+..+....+| .|+++-+++. ...|+|..- .++..+|...
T Consensus 664 F~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~~Ly~~L 719 (796)
T 2c4m_A 664 YIFGARVEELPALRES-YKPYELYETVP-GLKRALDALD---NGTLNDNNS-GLFYDLKHSL 719 (796)
T ss_dssp EEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTT---SSSSCCTTC-CHHHHHHHHH
T ss_pred EEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHH---cCCCCCCCH-HHHHHHHHHH
Confidence 99976 566665543 33323233455 3555444443 246888665 5566666554
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.4e-13 Score=146.15 Aligned_cols=252 Identities=13% Similarity=0.067 Sum_probs=159.9
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+|+++.......+++++++.|+|++....++.. .+..+ .. .......-..+|.+++.|....
T Consensus 94 kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglrs-----~~~~~---------pe-e~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 94 KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRC-----FDQRV---------PE-EINRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCCC-----SCTTS---------TH-HHHHHHHHHHCSEEEESSHHHH
T ss_pred CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCcc-----ccccC---------cH-HHHHHHHHhhhceeecCCHHHH
Confidence 899999987654333377888999997655443311 00000 00 0111223456899999998765
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
+ +....|++ ..++.++.|. +|...+. ... ......++.+|
T Consensus 159 ~--------------------~l~~~G~~--~~~I~vtGnp~~D~~~~~--~~~---------------~~~~~~~~~lg 199 (385)
T 4hwg_A 159 R--------------------YLIAEGLP--AELTFKSGSHMPEVLDRF--MPK---------------ILKSDILDKLS 199 (385)
T ss_dssp H--------------------HHHHTTCC--GGGEEECCCSHHHHHHHH--HHH---------------HHHCCHHHHTT
T ss_pred H--------------------HHHHcCCC--cCcEEEECCchHHHHHHh--hhh---------------cchhHHHHHcC
Confidence 5 11233665 6789888873 3421110 000 01123446677
Q ss_pred ccCCCCCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-C-C-
Q 036539 526 YLADRKKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-Q-L- 599 (749)
Q Consensus 526 ~l~~~~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~-L- 599 (749)
+ ++++.++++.+|.. ..|++..+++|+.++.+.. ++.+++..+ + .+.+.++++ + +
T Consensus 200 l--~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~-p---------------~~~~~l~~~~~~~~ 260 (385)
T 4hwg_A 200 L--TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTH-P---------------RTKKRLEDLEGFKE 260 (385)
T ss_dssp C--CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEEC-H---------------HHHHHHHTSGGGGG
T ss_pred C--CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECC-h---------------HHHHHHHHHHHHhc
Confidence 7 44444566666753 3478999999999987644 577766543 2 133444444 3 2
Q ss_pred -CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc-cccccccCceEEEECCCC
Q 036539 600 -KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-PAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 600 -~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG-~~EiI~dg~~G~lv~p~d 677 (749)
.++|.+++ .+...++..+++. ||+++.+| |....||+++|+|+|+..... ..|.+..| +++++.+ |
T Consensus 261 ~~~~v~l~~----~lg~~~~~~l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d 328 (385)
T 4hwg_A 261 LGDKIRFLP----AFSFTDYVKLQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K 328 (385)
T ss_dssp TGGGEEECC----CCCHHHHHHHHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S
T ss_pred CCCCEEEEc----CCCHHHHHHHHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C
Confidence 36899987 6667788999995 99999887 556799999999999975543 56777766 6777754 8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
++++++++.+ +++|+..+++|++++.
T Consensus 329 ~~~i~~ai~~----ll~d~~~~~~m~~~~~ 354 (385)
T 4hwg_A 329 AERVLQAVKT----ITEEHDNNKRTQGLVP 354 (385)
T ss_dssp HHHHHHHHHH----HHTTCBTTBCCSCCCH
T ss_pred HHHHHHHHHH----HHhChHHHHHhhccCC
Confidence 9999999955 4578877776665444
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-12 Score=152.14 Aligned_cols=232 Identities=13% Similarity=0.045 Sum_probs=156.3
Q ss_pred hhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC----CCCchH
Q 036539 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY----FPYTEK 499 (749)
Q Consensus 424 ~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f----~p~~~~ 499 (749)
++..-..++..|+.|-+||..-.+.++..+ + +.++. ..+.++.-|.||||...+ .|....
T Consensus 427 ~vnMa~lai~~S~~VNgVS~lH~e~ik~~~--f--------~~~~~------~~p~k~~~iTNGI~~rrWl~~~NP~l~~ 490 (824)
T 2gj4_A 427 RINMAHLCIAGSHAVNGVARIHSEILKKTI--F--------KDFYE------LEPHKFQNKTNGITPRRWLVLCNPGLAE 490 (824)
T ss_dssp EEEHHHHHHHTCSCEEESSHHHHHHHHHTT--T--------HHHHH------HCGGGEEECCCCBCTCCCCCCTCHHHHH
T ss_pred cccHHHHHHHhcCceeeEcHHHHHHHhhHH--h--------HHHHH------cChhhcccccCCcChhhhcccCCHhHHH
Confidence 344556789999999999987666443221 0 11221 226689999999999988 332210
Q ss_pred H--hh-----------hhcc---c--hhh-----HHhhccccc----hhhhcCccCCCCCcEEEEEecccCCCCHHHH-H
Q 036539 500 Q--RR-----------LTKF---H--PEI-----EELLYNKED----NNEHIGYLADRKKPIIFSMARLDVVKNLTGL-T 551 (749)
Q Consensus 500 ~--~r-----------l~~~---~--~~~-----~~~l~~~~~----~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~L-i 551 (749)
. .. +.++ . +.+ +.+.-++.. ..++.|+..+++.+.++++.|+..+|+.+.+ +
T Consensus 491 lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l 570 (824)
T 2gj4_A 491 IIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCL 570 (824)
T ss_dssp HHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHH
T ss_pred HHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHH
Confidence 0 00 1111 0 111 112222222 4455788778899999999999999999998 7
Q ss_pred HHHHHhHc--cCC-----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC----CCC--cEEEecCccCcCChHHH
Q 036539 552 EWYGKNKR--LRN-----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ----LKG--QMRWIAAQSDRLRNGEL 618 (749)
Q Consensus 552 eA~~~l~~--~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~----L~~--~V~flG~~~~~~~~~el 618 (749)
..+.++.+ ..| ++++++.|.+.. .+......++.+..+++.++ ..+ +|.|+. ..+. .+
T Consensus 571 ~~i~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~----nYdv-sl 641 (824)
T 2gj4_A 571 HVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NYRV-SL 641 (824)
T ss_dssp HHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TCCH-HH
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEEEeCCH----hHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC----CCCH-HH
Confidence 77766631 122 478888888865 24444445555777776653 245 788886 3444 45
Q ss_pred HHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHH
Q 036539 619 YRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIV--DGVSGFHIDPYNGDES 681 (749)
Q Consensus 619 ~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~lv~p~d~e~l 681 (749)
.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.+ ...|||.|... ++++
T Consensus 642 A~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~~ev 707 (824)
T 2gj4_A 642 AEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-VEDV 707 (824)
T ss_dssp HHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-HHHH
T ss_pred HHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-HHHH
Confidence 5555557999999999 9999999999999999999998888878764 35689999865 6665
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=151.13 Aligned_cols=333 Identities=12% Similarity=0.002 Sum_probs=208.0
Q ss_pred CceEEEEcCCCchHHHH-HHHHc--------------CCCcEEEEecCCcccc---cCCCcc-------h-------hh-
Q 036539 367 KPDLIIGNYSDGNLVAS-VMASK--------------LGITQATIAHALEKTK---YEDSDV-------K-------WK- 413 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~-lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~-------~-------~~- 413 (749)
+||+||+|.+.++++.. ++... .+.+.++|.|++...- |+...+ . +.
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999876655 33222 3677899999985432 221100 0 00
Q ss_pred --h-----------cCc-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 414 --E-----------LDP-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 414 --~-----------~~~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
. +.. ...+..++..-..++..|+.|-+||..-.+.++... + ++++ ..++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~--f--------~~~~------~~~p~ 442 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL--F--------PEYH------QLWPN 442 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT--S--------HHHH------HHCGG
T ss_pred HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHH--h--------hHHH------HhCcc
Confidence 0 000 000111333455688999999999987666443221 0 1112 22366
Q ss_pred ceEEecCCCCCCCCC----CCchH-------------Hhhhhccch---------hh-HHhhccccc----hhhhcCccC
Q 036539 480 KFNIAAPGADQSVYF----PYTEK-------------QRRLTKFHP---------EI-EELLYNKED----NNEHIGYLA 528 (749)
Q Consensus 480 ki~VIpnGvD~~~f~----p~~~~-------------~~rl~~~~~---------~~-~~~l~~~~~----~~~~~g~l~ 528 (749)
|++=|.||||...+- |.... ...+.++.+ .+ +.+.-++.. .+++.|+..
T Consensus 443 k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 522 (796)
T 1l5w_A 443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522 (796)
T ss_dssp GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 899999999988773 22110 001111111 00 112222223 245678877
Q ss_pred CCCCcEEEEEecccCCCCHHH-HHHHHHHhHcc--C-----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH----
Q 036539 529 DRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRL--R-----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK---- 596 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~--~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~---- 596 (749)
+++.+.++++.|+..+|+.+. ++..+.++.+. . .++++++.|.+.. .+......++.+..+++.
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~D 598 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVADVINND 598 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCCh----hHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999999 78777766431 1 2588988888865 233333344445555551
Q ss_pred cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceE
Q 036539 597 YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSG 670 (749)
Q Consensus 597 ~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G 670 (749)
-...+ +|.|+. ..+. .+.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.++ ..||
T Consensus 599 p~~~~~lKVvfl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 673 (796)
T 1l5w_A 599 PLVGDKLKVVFLP----DYCV-SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENI 673 (796)
T ss_dssp TTTGGGEEEEECS----SCCH-HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcE
Confidence 13456 788886 4444 455555557999999999 99999999999999999999999999888755 4699
Q ss_pred EEECCCCHHHHHHHH---HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 671 FHIDPYNGDESSDKI---ADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 671 ~lv~p~d~e~lA~aI---~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
|.|.. +++++.+.- .+..+....+| .++++-+++.. ..|||... .++..+|...
T Consensus 674 F~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~-~~y~~Ly~~L 730 (796)
T 1l5w_A 674 FIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES---GKYSDGDK-HAFDQMLHSI 730 (796)
T ss_dssp EECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH---TTTTTTCT-TTTHHHHHHT
T ss_pred EEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc---CCCCCCcH-HHHHHHHHHH
Confidence 99986 777765322 11222233466 46665555543 57999774 6677777654
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.2e-12 Score=139.77 Aligned_cols=156 Identities=12% Similarity=0.031 Sum_probs=108.4
Q ss_pred CCCcEEEEEeccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+++++++|++. ..+.+..+++++.++ +++++++++.... +..++.++|.+.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~-------------------~~~~~~~~v~~~~- 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGL-------------------GRIDEGDDCLVVG- 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTC-------------------CCSSCCTTEEEES-
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccc-------------------ccccCCCCEEEec-
Confidence 4466788889998 667777788888765 4677777665431 0123468899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++..++. . .+|++|..+- ..|+.||+++|+|+|+...++ ..+.+++...|..+++. ++++++
T Consensus 275 ---~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 343 (404)
T 3h4t_A 275 ---EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLS 343 (404)
T ss_dssp ---SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHH
Confidence 56655544 4 5999998752 269999999999999976554 23445666688888754 678888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+ +++ |++++++++.+.... + -.++.+++.++.+++
T Consensus 344 ~ai~~----ll~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 344 AALAT----ALT-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHH----HTS-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHHH
T ss_pred HHHHH----HhC-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHh
Confidence 88854 557 888887776665443 3 566777777766543
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-11 Score=135.39 Aligned_cols=161 Identities=16% Similarity=0.115 Sum_probs=109.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+.+.++++.|+.. .+..+.+.+++..+.+ .+++++ ++|.+.. .+.+. .++++|++.+
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~------------~~~~~------~~~~~v~~~~- 311 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD------------PADLG------EVPPNVEVHQ- 311 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC------------GGGGC------SCCTTEEEES-
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC------------hHHhc------cCCCCeEEec-
Confidence 3456778889887 3444444445544543 357774 4566543 11111 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+|+ .+|++|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+++. ++++++
T Consensus 312 ---~~~~~---~~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 312 ---WVPQL---DILT-KASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp ---SCCHH---HHHT-TCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred ---CCCHH---HHHh-hCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 55544 5677 599999863 2479999999999999986643 45556667789988765 788899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.++ ++|++.++++++.+.+.. +....+.+++.++++.+
T Consensus 381 ~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 381 EAVLAV----ASDPGVAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHH----HHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 888654 479998888887776543 55677777777777654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-11 Score=133.52 Aligned_cols=154 Identities=11% Similarity=-0.019 Sum_probs=104.8
Q ss_pred CCcEEEEEecc-cCCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARL-DVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
...++++.|++ ...|.++.+++++.++. .+++++ |.+.. + . ..+.++|.+.|
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~-------------~-~------~~~~~~v~~~~- 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------V-L------PDDGADCFAIG- 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------C-C------SSCGGGEEECS-
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCcc-------------c-c------cCCCCCEEEeC-
Confidence 35678888999 57888888888887752 456555 55432 0 0 13456899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++..++ ++ ++|++|..+ -..|++|||++|+|+|+....+ ..+.+++...|+.+++. +.++++
T Consensus 292 ---~~~~~~~---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 292 ---EVNHQVL---FG-RVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp ---SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---cCChHHH---Hh-hCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 6666555 45 699999864 2369999999999999986554 55667777789998764 678888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
++| .++ .|++.++++++.+.+.. ..-..+.+++.++++.
T Consensus 361 ~~i----~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 361 AAL----ATA-LTPETHARATAVAGTIR-TDGAAVAARLLLDAVS 399 (415)
T ss_dssp HHH----HHH-TSHHHHHHHHHHHHHSC-SCHHHHHHHHHHHHHH
T ss_pred HHH----HHH-cCHHHHHHHHHHHHHHh-hcChHHHHHHHHHHHH
Confidence 888 567 78888887766655432 2334455555555543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.25 E-value=6.3e-11 Score=136.11 Aligned_cols=180 Identities=11% Similarity=-0.043 Sum_probs=124.7
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEE--EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLV--IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG 601 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv--IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 601 (749)
+|+..+++.+++++.+++ .|..+.+++++.++.+..|+..++ ++|.+..+ .+.+.+.+.+.|+.+
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~-----------~~~~~~~~~~~GI~~ 499 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI-----------THPYVERFIKSYLGD 499 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG-----------GHHHHHHHHHHHHGG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh-----------hHHHHHHHHHcCCCc
Confidence 565322346678888875 688999999999998888887764 35643220 122223345667878
Q ss_pred cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccc------cCceEEEECC
Q 036539 602 QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIV------DGVSGFHIDP 675 (749)
Q Consensus 602 ~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~------dg~~G~lv~p 675 (749)
++.|+| .++..+....++. +|+++-|+.+.+ |+|.+|||+||+|||+..-+++..-+. -|-.++++.
T Consensus 500 Rv~F~g----~~p~~e~la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA- 572 (631)
T 3q3e_A 500 SATAHP----HSPYHQYLRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA- 572 (631)
T ss_dssp GEEEEC----CCCHHHHHHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-
T ss_pred cEEEcC----CCCHHHHHHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-
Confidence 999999 7778898999995 999999998755 999999999999999965554444332 233343232
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|.++++++.. +|.+|++.+++++++.+++.....-|+..++++.++|
T Consensus 573 ~d~eeYv~~Av----~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~y 620 (631)
T 3q3e_A 573 NTVDEYVERAV----RLAENHQERLELRRYIIENNGLNTLFTGDPRPMGQVF 620 (631)
T ss_dssp SSHHHHHHHHH----HHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHH
T ss_pred CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHH
Confidence 27888887774 4558999999999999988644322223444444443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.24 E-value=9.1e-11 Score=129.91 Aligned_cols=152 Identities=11% Similarity=-0.006 Sum_probs=102.0
Q ss_pred CCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 531 KKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 531 ~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
.+.++++.|++. ..|.+..+++++..+ +++++++ |.+.. + . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-------------~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTEL-------------V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTC-------------C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCccc-------------c-c------cCCCCCEEEe
Confidence 356778889984 466677778887765 3566665 54432 0 0 1346789999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECC--CCHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDP--YNGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p--~d~e~ 680 (749)
+ +++..++ +. ++|++|.-+ -..|+.|||++|+|+|+....+ ..+.+++...|..++. .+.++
T Consensus 292 ~----~~~~~~l---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 359 (416)
T 1rrv_A 292 D----EVNFQAL---FR-RVAAVIHHG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359 (416)
T ss_dssp S----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred c----cCChHHH---hc-cCCEEEecC----ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence 8 6666554 45 699999853 2469999999999999975533 5556667778998875 36788
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM-LNM 726 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l-l~l 726 (749)
++++| .++ .|+++++++++.+.+.. ..-.. .+++.+ +.+
T Consensus 360 l~~~i----~~l-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~e~~ 399 (416)
T 1rrv_A 360 LSAAL----TTV-LAPETRARAEAVAGMVL-TDGAA-AAADLVLAAV 399 (416)
T ss_dssp HHHHH----HHH-TSHHHHHHHHHHTTTCC-CCHHH-HHHHHHHHHH
T ss_pred HHHHH----HHh-hCHHHHHHHHHHHHHHh-hcCcH-HHHHHHHHHH
Confidence 88888 567 89988888776654432 22233 444444 443
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=4.2e-11 Score=131.03 Aligned_cols=159 Identities=13% Similarity=0.158 Sum_probs=103.6
Q ss_pred CCCcEEEEEecccCCC-CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVK-NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K-gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|++...+ +...+.+++..+.+. +..+++.+++.... ....+++++.+.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~------------------~~~~~~~~v~~~~- 294 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADV--DAEFVLTLGGGDLA------------------LLGELPANVRVVE- 294 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGS--SSEEEEECCTTCCC------------------CCCCCCTTEEEEC-
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhcc--CceEEEEecCcccc------------------ccccCCCCEEEEe-
Confidence 3445677788876644 445555566555543 46777766654411 1124568899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCCCHHHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
+++..++ ++ .+|+||.- +-..++.|||++|+|+|+.... ...+.+++...|..++.. +..+++
T Consensus 295 ---~~p~~~l---L~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~~~a 361 (400)
T 4amg_A 295 ---WIPLGAL---LE-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLGAEQ 361 (400)
T ss_dssp ---CCCHHHH---HT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT--TCSHHH
T ss_pred ---ecCHHHH---hh-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC--CchHHH
Confidence 6766555 45 59999865 3456999999999999996444 355666666688888754 446777
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|.+ +++||+++++..+-+.+ +...-+....++.++++.
T Consensus 362 l~~----lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~lA 399 (400)
T 4amg_A 362 CRR----LLDDAGLREAALRVRQE-MSEMPPPAETAAXLVALA 399 (400)
T ss_dssp HHH----HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHC
T ss_pred HHH----HHcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHhh
Confidence 755 44799988876655544 345568888888877753
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=105.43 Aligned_cols=132 Identities=12% Similarity=0.127 Sum_probs=97.9
Q ss_pred CCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 531 KKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 531 ~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
.+.+++++|++. +.|++..+++++.++ +.++++++++..+ + .+.++|++.|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~------------~---------~~~~~v~~~~ 74 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP------------D---------TLGLNTRLYK 74 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC------------T---------TCCTTEEEES
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc------------c---------cCCCcEEEec
Confidence 456788899985 567777777777543 3688888876541 0 2457899999
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHH
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPY--NGDES 681 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~--d~e~l 681 (749)
+++..++..+ + ++|++|..+ -+.|++|||++|+|+|+.... +..+.+.+...|+.+++. +++++
T Consensus 75 ----~~~~~~~l~~-~-~ad~~I~~~----G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l 144 (170)
T 2o6l_A 75 ----WIPQNDLLGH-P-KTRAFITHG----GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDL 144 (170)
T ss_dssp ----SCCHHHHHTS-T-TEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHH
T ss_pred ----CCCHHHHhcC-C-CcCEEEEcC----CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHH
Confidence 6666565543 5 599999863 468999999999999999764 356677778899999877 78899
Q ss_pred HHHHHHHHHHhcCCHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~m 702 (749)
+++|.+++ .|++.++++
T Consensus 145 ~~~i~~ll----~~~~~~~~a 161 (170)
T 2o6l_A 145 LNALKRVI----NDPSYKENV 161 (170)
T ss_dssp HHHHHHHH----HCHHHHHHH
T ss_pred HHHHHHHH----cCHHHHHHH
Confidence 99996554 687755444
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00012 Score=86.97 Aligned_cols=187 Identities=13% Similarity=0.082 Sum_probs=135.1
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
.+..+|+ +.+.+++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+++.|+
T Consensus 513 ~R~~~gL--p~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-----------~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGL--PEDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTC--CTTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEEEEEEETTGG-----------GHHHHHHHHHHTTC
T ss_pred chhhcCC--CCCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-----------HHHHHHHHHHhcCC
Confidence 4566788 67777777777665 445677888888888889999999876543 13567888888888
Q ss_pred C-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----cccc-CceEEE
Q 036539 600 K-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE-----IIVD-GVSGFH 672 (749)
Q Consensus 600 ~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E-----iI~d-g~~G~l 672 (749)
. ++|.|.+ ..+..+....+.. +||++=|-.| +-|.|.+||+.+|+|||+-.-..+.. ++.. |-.-+
T Consensus 578 ~~~r~~f~~----~~~~~~~l~~~~~-~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~- 650 (723)
T 4gyw_A 578 PQNRIIFSP----VAPKEEHVRRGQL-ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLEL- 650 (723)
T ss_dssp CGGGEEEEE----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGG-
T ss_pred CcCeEEECC----CCCHHHHHHHhCC-CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccc-
Confidence 5 6899999 7778888888885 9999988666 44899999999999999853221111 1110 11112
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHhHhHHh
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE--CYTWKIYANKMLNMGCMYSFWKQ 735 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~~~~~~~~ 735 (749)
| ..|.++..+.-. +|.+|++.+.++.++-+++... -|+-+..++.+++.|+. .|+.
T Consensus 651 i-a~~~~~Y~~~a~----~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~--~w~r 708 (723)
T 4gyw_A 651 I-AKNRQEYEDIAV----KLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ--MWEH 708 (723)
T ss_dssp B-CSSHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH--HHHH
T ss_pred c-cCCHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH--HHHH
Confidence 2 236777766664 3558999999999888887755 38999999999999876 4543
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.012 Score=66.10 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=46.1
Q ss_pred cCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEECCC-----CHH
Q 036539 612 RLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-VDGVSGFHIDPY-----NGD 679 (749)
Q Consensus 612 ~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI-~dg~~G~lv~p~-----d~e 679 (749)
+++.. .+++ .++ +||.-. =-.+++||+++|+|+|+-...+ .+..+ +.-+.|..++.. +.+
T Consensus 346 w~Pq~---~vL~-h~~v~~fvtHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~ 417 (480)
T 2vch_A 346 WAPQA---QVLA-HPSTGGFLTHC----GWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 417 (480)
T ss_dssp CCCHH---HHHH-STTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred ccCHH---HHhC-CCCcCeEEecc----cchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence 55554 4454 466 555541 2358999999999999965433 34443 466688877643 678
Q ss_pred HHHHHHHHHH
Q 036539 680 ESSDKIADFF 689 (749)
Q Consensus 680 ~lA~aI~~~l 689 (749)
+++++|.+++
T Consensus 418 ~l~~av~~vl 427 (480)
T 2vch_A 418 EVARVVKGLM 427 (480)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888886554
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0048 Score=69.47 Aligned_cols=151 Identities=10% Similarity=0.031 Sum_probs=83.8
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
..++++.|.+.. .....+.+++..+.+. +.+++++-+....... + +.. -+.+ .++. .+++...+
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~-~-~~l--~~~~---~~~~--~~~~~v~~---- 359 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGG-S-VIF--SSEF---TNEI--ADRGLIAS---- 359 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTT-G-GGS--CHHH---HHHH--TTTEEEES----
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccc-c-ccC--cHhH---HHhc--CCCEEEEe----
Confidence 445666777653 2344455555444432 4666665433210000 0 000 0111 1122 46788888
Q ss_pred cCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEECC-CCHHHHHHH
Q 036539 612 RLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIV-DGVSGFHIDP-YNGDESSDK 684 (749)
Q Consensus 612 ~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~-dg~~G~lv~p-~d~e~lA~a 684 (749)
+++..+ +++. ++++||.-. =..+++||+++|+|+|+-...+ .+..+. +-+.|..++. -+.++++++
T Consensus 360 ~~pq~~---~L~h~~~~~~vth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~ 432 (482)
T 2pq6_A 360 WCPQDK---VLNHPSIGGFLTHC----GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKL 432 (482)
T ss_dssp CCCHHH---HHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHH
T ss_pred ecCHHH---HhcCCCCCEEEecC----CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHH
Confidence 666654 5542 234476642 2468999999999999975443 344343 4567888762 267888888
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
|.+ +..|++ .++|.+++++..
T Consensus 433 i~~----ll~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 433 INE----VIAGDK-GKKMKQKAMELK 453 (482)
T ss_dssp HHH----HHTSHH-HHHHHHHHHHHH
T ss_pred HHH----HHcCCc-HHHHHHHHHHHH
Confidence 855 447886 356666665543
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0019 Score=72.39 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=62.6
Q ss_pred CCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHI 673 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv 673 (749)
.+++...+ +++.. .+++. ++|+||.=. =..+++||+++|+|+|+-...+ .+..+.+. +.|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth~----G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTHC----GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEecC----CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 36788887 66654 34552 367887652 2469999999999999974432 34555565 688888
Q ss_pred CCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 674 DPY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 674 ~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
+.. +.++++++|.+++ .|++ .++|.+++++.
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRAL 425 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHH
Confidence 643 5788888886544 6775 45566665554
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0092 Score=66.86 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=75.4
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
...++++.|.+...-+.+.+.+++..+.+. +++++++-+... ..-++ .+.+.... .+++...+
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~---~~l~~------~~~~~~~~---~~~~~v~~--- 338 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEK---KVFPE------GFLEWMEL---EGKGMICG--- 338 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCG---GGSCT------THHHHHHH---HCSEEEES---
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCc---ccCCh------hHHHhhcc---CCCEEEEc---
Confidence 345667778776323434444444444332 356666554320 00011 11111100 24677777
Q ss_pred CcCChHHHHHHHH-ccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccc-cccCceEEEE-C---C----C
Q 036539 611 DRLRNGELYRCIA-DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEI-IVDGVSGFHI-D---P----Y 676 (749)
Q Consensus 611 ~~~~~~el~~~la-~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~Ei-I~dg~~G~lv-~---p----~ 676 (749)
+++..+ +++ .++|+||.-. =..+++||+++|+|+|+-...+ .+.. ++.-+.|..+ + . -
T Consensus 339 -w~pq~~---vL~h~~~~~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~ 410 (463)
T 2acv_A 339 -WAPQVE---VLAHKAIGGFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410 (463)
T ss_dssp -SCCHHH---HHHSTTEEEEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCC
T ss_pred -cCCHHH---HhCCCccCeEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccc
Confidence 666544 454 2477888753 2469999999999999975433 3444 4566688888 2 2 2
Q ss_pred CHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFF 689 (749)
Q Consensus 677 d~e~lA~aI~~~l 689 (749)
+.++++++|.+++
T Consensus 411 ~~~~l~~ai~~ll 423 (463)
T 2acv_A 411 AAEEIEKGLKDLM 423 (463)
T ss_dssp CHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH
Confidence 6788888886543
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0073 Score=67.57 Aligned_cols=145 Identities=12% Similarity=0.040 Sum_probs=82.7
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHH-HHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMH-ALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~-~li~~~~L~~~V~flG~~ 609 (749)
+..+.++.|..... ..+.+.+.+..+.+. +++++++-+... .+.+- .+.++ ..+++...+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~------------~~~lp~~~~~~--~~~~~~vv~-- 333 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP------------KEKLPKGFLER--TKTKGKIVA-- 333 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH------------HHHSCTTHHHH--TTTTEEEES--
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc------------hhcCCHhHHhh--cCCceEEEe--
Confidence 34456777877642 334455555444432 355665543321 01110 11122 246788888
Q ss_pred cCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC--CCHHH
Q 036539 610 SDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHIDP--YNGDE 680 (749)
Q Consensus 610 ~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv~p--~d~e~ 680 (749)
+++..++. + .++ +||.-. =-.+++||+++|+|+|+-...+ .+..+.+. +.|..++. -+.++
T Consensus 334 --w~Pq~~vL---~-h~~v~~fvtH~----G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~ 403 (454)
T 3hbf_A 334 --WAPQVEIL---K-HSSVGVFLTHS----GWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKES 403 (454)
T ss_dssp --SCCHHHHH---H-STTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHH
T ss_pred --eCCHHHHH---h-hcCcCeEEecC----CcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHH
Confidence 77765544 4 477 666542 1358999999999999964433 34455553 68888864 35788
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
++++|.+++ .++ ..++|.+++++.
T Consensus 404 l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 404 IKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 888886544 664 234455555443
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0054 Score=64.26 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=61.6
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++|..+...-...+++++.. . .. -.+|.|.+.. ..+++++.+++. ++++..++..
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~---~-~~-i~vv~G~~~~-----------~~~~l~~~~~~~---~~v~v~~~~~- 217 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPK---T-KI-ISIATSSSNP-----------NLKKLQKFAKLH---NNIRLFIDHE- 217 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCT---T-SC-EEEEECTTCT-----------THHHHHHHHHTC---SSEEEEESCS-
T ss_pred CeEEEEECCCchhhHHHHHHHHhhc---C-CC-EEEEECCCch-----------HHHHHHHHHhhC---CCEEEEeCHH-
Confidence 3466788877654323344444432 1 12 3455666644 145565555543 4799998544
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++..+|+. ||+.|.+ -|.|+.|++++|+|+|.-.
T Consensus 218 -----~m~~~m~~-aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 218 -----NIAKLMNE-SNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp -----CHHHHHHT-EEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred -----HHHHHHHH-CCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 68889994 9999995 3689999999999999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0098 Score=63.25 Aligned_cols=100 Identities=16% Similarity=0.045 Sum_probs=65.5
Q ss_pred CcEEEEEec-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC--C-CCcEEE
Q 036539 532 KPIIFSMAR-LDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ--L-KGQMRW 605 (749)
Q Consensus 532 k~vIl~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~--L-~~~V~f 605 (749)
+.+++..|. ..+.|... .+.+++..+.+. +++++++|+..+ .+...++.+..+ . ...+.+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTTEEEC
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhh------------HHHHHHHHHhhhhccccceEec
Confidence 345566665 54556654 888888888764 688999876543 222233332221 0 123456
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+..++..+++. +|++|... .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 247 AG----ETQLDQAVILIAA-CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp TT----TSCHHHHHHHHHT-SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred cC----cCCHHHHHHHHHh-CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 66 6778899999995 99999985 244444 99999999984
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.18 Score=54.05 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=68.2
Q ss_pred CCCCcEE-EEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 529 DRKKPII-FSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 529 ~~~k~vI-l~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
++++++| +..|.=.+.|. .+.+.+.+..+.+. +.+++++|+..+ .+...++++..+ ...+.+
T Consensus 182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e------------~~~~~~i~~~~~-~~~~~l 246 (349)
T 3tov_A 182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMD------------LEMVQPVVEQME-TKPIVA 246 (349)
T ss_dssp CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTT------------HHHHHHHHHTCS-SCCEEC
T ss_pred CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcch------------HHHHHHHHHhcc-cccEEe
Confidence 4445554 55554334554 45788888887654 578888886544 334444555444 234566
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+-.++..+++. +|++|..- .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~~~i~~D----sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 247 TG----KFQLGPLAAAMNR-CNLLITND----SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp TT----CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHTTTCCEEEE
T ss_pred eC----CCCHHHHHHHHHh-CCEEEECC----CCHHHH-HHhcCCCEEEE
Confidence 67 6778999999995 99999872 255555 89999999995
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=87.70 E-value=1.2 Score=46.62 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=63.1
Q ss_pred cEEEEEecccCCCCH--HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 533 PIIFSMARLDVVKNL--TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
.+++..|.=.+.|.. +.+.+.+..+.+. +++++++++++. +.+...++.+.. +++.+.|
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~-----------e~~~~~~i~~~~---~~~~l~g--- 240 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPH-----------EEERAKRLAEGF---AYVEVLP--- 240 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHH-----------HHHHHHHHHTTC---TTEEECC---
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHH-----------HHHHHHHHHhhC---CcccccC---
Confidence 345555543444544 4788888877642 688888754433 122333333332 3466777
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ||++|..- .|..=+ |.+.|+|+|+-
T Consensus 241 -~~sl~el~ali~~-a~l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 241 -KMSLEGVARVLAG-AKFVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp -CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred -CCCHHHHHHHHHh-CCEEEecC----CcHHHH-HHHcCCCEEEE
Confidence 7778999999995 99999883 255555 77799999984
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=86.20 E-value=0.56 Score=47.14 Aligned_cols=64 Identities=9% Similarity=-0.004 Sum_probs=42.6
Q ss_pred HHHHHHH-ccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCCCHHHHHHHHHH
Q 036539 617 ELYRCIA-DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 617 el~~~la-~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
++..+|+ . ||++|.=+ =..|++|++++|+|.|.-..... ++.+.+...++.+ +++.++++|.+
T Consensus 124 ~m~~~l~~~-AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~~~~L~~~i~~ 195 (224)
T 2jzc_A 124 KMQSIIRDY-SDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---APTETGLIAGL 195 (224)
T ss_dssp SHHHHHHHH-CSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---CSCTTTHHHHH
T ss_pred hHHHHHHhc-CCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---CHHHHHHHHHH
Confidence 6778888 7 99998864 35699999999999998654321 2233333345655 34556666654
Q ss_pred H
Q 036539 688 F 688 (749)
Q Consensus 688 ~ 688 (749)
+
T Consensus 196 l 196 (224)
T 2jzc_A 196 R 196 (224)
T ss_dssp H
T ss_pred H
Confidence 3
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 749 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 6e-18 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-12 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-11 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 1e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 85.1 bits (209), Expect = 6e-18
Identities = 62/375 (16%), Positives = 116/375 (30%), Gaps = 40/375 (10%)
Query: 363 FLGGKPDLIIGNYSDGNLVASVM--ASKLGITQATIAHALEKTKYEDSDVKWKELDPKYH 420
G +PD++ + + M A I H + +++ K P +
Sbjct: 126 LPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHA 185
Query: 421 FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480
F + I ++ + + S + T + I
Sbjct: 186 FGMEGIEYYNDVSFLKGGLQTATALSTVS-----PSYAEEILTAEFGMGLEGVIGSRAHV 240
Query: 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR 540
+ G D V+ P T+ ++ NK+ EH + D P+ ++R
Sbjct: 241 LHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF-RIDDDGSPLFCVISR 299
Query: 541 LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600
L K + + E + L LV++GA + A ++
Sbjct: 300 LTWQKGIDLMAEAVDEIVSLG--GRLVVLGAGDVA----------LEGALLAAASRH--H 345
Query: 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660
G++ ++ L L + D A + P+ +E GLT + A+ G GG
Sbjct: 346 GRVGVAIGYNEPLS--HLMQAGCD---AIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL 400
Query: 661 AEIIVDG---------VSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711
A+ ++D +G P D I DP W + G+K
Sbjct: 401 ADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLWTQMQKLGMKSD- 458
Query: 712 ECYTWKIYANKMLNM 726
+W+ A +
Sbjct: 459 --VSWEKSAGLYAAL 471
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 67.6 bits (164), Expect = 2e-12
Identities = 23/205 (11%), Positives = 55/205 (26%), Gaps = 17/205 (8%)
Query: 530 RKKPIIFSMARLDVVKN----LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETA 585
+ IFS+ RLD K K + + + ++
Sbjct: 252 KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 311
Query: 586 EIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645
+++ + + + + L + + + L + L E
Sbjct: 312 QLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTPLRDGMNLVAKEY 370
Query: 646 MNCGLPTF-----ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWN 700
+ P + G A + + ++PY+ DE + + A +
Sbjct: 371 VAAQDPANPGVLVLSQFAGAANELTSAL---IVNPYDRDEVAAALD---RALTMSLAERI 424
Query: 701 KFSTEGLKRINECYTWKIYANKMLN 725
E L I + + ++
Sbjct: 425 SRHAEMLDVIVK-NDINHWQECFIS 448
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 64.5 bits (155), Expect = 2e-11
Identities = 44/269 (16%), Positives = 87/269 (32%), Gaps = 11/269 (4%)
Query: 462 FTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED-- 519
F GL + D+ +V Y + + ++N D
Sbjct: 163 FHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCS 222
Query: 520 --NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSK 577
N ++ D +K + S +D + + K + L L + +
Sbjct: 223 FWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVL--LKAIEILSSKKE 280
Query: 578 SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637
++ K L + + + + E R + + + P+ +E
Sbjct: 281 FQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEP 340
Query: 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPT 697
FGL +EAM G A+ GG +II +G + + E ++ I E +
Sbjct: 341 FGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKALEL---SRS 396
Query: 698 YWNKFSTEGLKRINECYTWKIYANKMLNM 726
+KF KR ++W+ A + +
Sbjct: 397 DLSKFRENCKKRAMS-FSWEKSAERYVKA 424
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 49.1 bits (115), Expect = 1e-06
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 642 VIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI-DPYNGDESSDKIADFFEACKVDPTYWN 700
++EA+ GLP T G A I D G I +P++ ++ ++ +
Sbjct: 286 LLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT----QSPLRM 341
Query: 701 KFSTEGLKRINECYTWKIYANKMLNM 726
++ + K ++
Sbjct: 342 AWAENARHYADT-QDLYSLPEKAADI 366
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 749 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.19 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.13 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.07 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.87 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.6 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.54 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.22 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.01 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.83 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.62 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.59 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.32 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.3 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.13 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.83 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 82.75 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.4e-42 Score=390.96 Aligned_cols=434 Identities=17% Similarity=0.189 Sum_probs=273.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc---
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP--- 315 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~--- 315 (749)
|||++||...+|- -.+||...++. +|+++|+++||+|+ |+|+.++.-... ..+..+.
T Consensus 1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~-~~~~~~~~~~ 60 (477)
T d1rzua_ 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAA-VTDPVKCFEF 60 (477)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHH-CCSCEEEEEE
T ss_pred CEEEEEEEeeecc-------cccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcchhhh-cccceEEEEE
Confidence 8999999887752 14799887777 66777899999999 998654321000 0000000
Q ss_pred --ccCccceEEEEecCcc--------------CCc-cccccc-cccccccchHHHHHHHHHHHHHHc-CCCceEEEEcCC
Q 036539 316 --IEGTKHSNILRVPFKT--------------DKG-ILHRWV-SRFDVYPYLEGFAQDATTMILEFL-GGKPDLIIGNYS 376 (749)
Q Consensus 316 --i~~~~~~~I~rvp~~~--------------~~~-~~~~~i-sr~~i~pyl~~f~~~~~~~l~~~l-~~~pDIIh~h~~ 376 (749)
..+ ..+.+.+++... ..+ +...+. .....+.....+...+.+.+.... ..+|||||+|.+
T Consensus 61 ~~~~~-~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~ 139 (477)
T d1rzua_ 61 TDLLG-EKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDW 139 (477)
T ss_dssp SCSSS-CCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHH
T ss_pred eccCC-ceEEEEEEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecch
Confidence 000 112222222111 000 111000 000111111222223332222222 358999999988
Q ss_pred CchHHHHHHH--HcCCCcEEEEecCCcccccCCCcchhhhcCc-------ccccchhhhHHHHHhhhCCEEEeCCHHHHh
Q 036539 377 DGNLVASVMA--SKLGITQATIAHALEKTKYEDSDVKWKELDP-------KYHFSCQFIADTIAMNATDFIIASTFQEIA 447 (749)
Q Consensus 377 ~~~lva~lla--~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~-------~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~ 447 (749)
.+++.+..+. +..++|+|.|.|++................. ...+.......+..+..+|.++++|...++
T Consensus 140 ~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~ 219 (477)
T d1rzua_ 140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAE 219 (477)
T ss_dssp HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHH
T ss_pred hHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHH
Confidence 7765555443 4567999999998744322111111000000 111111223345678899999999987665
Q ss_pred hcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCcc
Q 036539 448 GSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYL 527 (749)
Q Consensus 448 ~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l 527 (749)
..... + .++..... .... ..++.+|+||+|.+.|.|.....-..............+....+...++
T Consensus 220 ~~~~~---~---~~~~~~~~----~~~~--~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (477)
T d1rzua_ 220 EILTA---E---FGMGLEGV----IGSR--AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI- 286 (477)
T ss_dssp HTTSH---H---HHTTCHHH----HHTT--GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC-
T ss_pred HHHHH---h---cCcchhhh----hhhc--cccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccc-
Confidence 22111 0 00000000 0111 4589999999999999875332100000000000011111122234454
Q ss_pred CCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 528 ADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 528 ~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
.++++++|+|+||+++.||++.|++|+.++.+. +++|+++|.|+. .....+.++... +.++|.+.|
T Consensus 287 ~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~----------~~~~~~~~~~~~--~~~~v~~~~ 352 (477)
T d1rzua_ 287 DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV----------ALEGALLAAASR--HHGRVGVAI 352 (477)
T ss_dssp CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH----------HHHHHHHHHHHH--TTTTEEEEE
T ss_pred ccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCc----------hHHHHHHHHHhh--cCCeEEEEc
Confidence 255678999999999999999999999998764 689999999865 223344444444 458899998
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc---------eEEEECCCCH
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGV---------SGFHIDPYNG 678 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~---------~G~lv~p~d~ 678 (749)
..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||++|+|.|++ +|++++|.|+
T Consensus 353 ----~~~~~~~~~~~~-~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~ 427 (477)
T d1rzua_ 353 ----GYNEPLSHLMQA-GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTL 427 (477)
T ss_dssp ----SCCHHHHHHHHH-HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSH
T ss_pred ----ccChhHHHHHHH-hCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCH
Confidence 666778888888 59999999999999999999999999999999999999998875 8999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++|++|.++++ +.+||+.|++|+++|+ .++|||+.++++|+++|+.
T Consensus 428 ~~la~ai~~~l~-~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 428 DGLKQAIRRTVR-YYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHH
Confidence 999999988763 5579999999999885 3679999999999999875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=2.3e-41 Score=372.10 Aligned_cols=404 Identities=16% Similarity=0.140 Sum_probs=274.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc---
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP--- 315 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~--- 315 (749)
|||+++|..+.|- .+||++.|+. .|+++|+++||+|+ |+|+.++........ ....
T Consensus 1 MkIl~~~~~~pP~--------~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~-~~~~~~~ 59 (437)
T d2bisa1 1 MKVLLLGFEFLPV--------KVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIG-KIRVFGE 59 (437)
T ss_dssp CEEEEECSCCTTC--------CSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEE-EEECSSS
T ss_pred CEEEEECCccCCc--------ccCCHHHHHH--------HHHHHHHHcCCEEE----EEecCCCccchhhcc-ceeeccc
Confidence 8999999776542 2799999998 67778899999999 999765432111000 0000
Q ss_pred -------ccCccceEEEEecCccCCcccccccccccc-cc-------chHHHHHHHHHHHHHHc--CCCceEEEEcCCCc
Q 036539 316 -------IEGTKHSNILRVPFKTDKGILHRWVSRFDV-YP-------YLEGFAQDATTMILEFL--GGKPDLIIGNYSDG 378 (749)
Q Consensus 316 -------i~~~~~~~I~rvp~~~~~~~~~~~isr~~i-~p-------yl~~f~~~~~~~l~~~l--~~~pDIIh~h~~~~ 378 (749)
.....++.+.+++..- +++... .+ ....|.......+.... ...|||||+|++..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~ 131 (437)
T d2bisa1 60 EVQVKVSYEERGNLRIYRIGGGL--------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 131 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEESSG--------GGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGG
T ss_pred ccceeeeeeccCCeEEEecCccc--------cccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhh
Confidence 0111233444333211 111111 11 11122222222222222 45789999999988
Q ss_pred hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccc
Q 036539 379 NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYES 458 (749)
Q Consensus 379 ~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~ 458 (749)
++++.++++..++|++++.|+.....++......... ...........+......+|.+++++........
T Consensus 132 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~-------- 202 (437)
T d2bisa1 132 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGL-SELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEW-------- 202 (437)
T ss_dssp HHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTC-GGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTH--------
T ss_pred hhHhhhhhccccCceeEEEeeccccccchhhhhhccc-hhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhh--------
Confidence 8999999999999999999998554332111111111 1111112233456678889999999987654110
Q ss_pred ccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEE
Q 036539 459 HTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSM 538 (749)
Q Consensus 459 ~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~v 538 (749)
. .. ..+..++.+||||+|.+.|.|......+... .....+.+|. .++++|+++
T Consensus 203 ----------~-~~--~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~---~~~~~i~~~ 255 (437)
T d2bisa1 203 ----------G-FF--RNFEGKITYVFNGIDCSFWNESYLTGSRDER-----------KKSLLSKFGM---DEGVTFMFI 255 (437)
T ss_dssp ----------H-HH--GGGTTTEEECCCCCCTTTSCGGGCCSCHHHH-----------HHHHHHHTTC---CSCEEEEEE
T ss_pred ----------h-hh--ccccCceEEEecccccccccccccchhhHHH-----------HHhhhhhhhc---cCCceEEEe
Confidence 0 01 1226789999999999988764211100000 0011234554 567899999
Q ss_pred ecccC-CCCHHHHHHHHHHhHcc--CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCCh
Q 036539 539 ARLDV-VKNLTGLTEWYGKNKRL--RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRN 615 (749)
Q Consensus 539 GRL~~-~Kgl~~LieA~~~l~~~--~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~ 615 (749)
||++. .||++.+++|+..+... .++++|+|+|.++. .....++.+.+. ....+.+.| .++.
T Consensus 256 G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~----------~~~~~~~~~~~~--~~~~~~~~~----~~~~ 319 (437)
T d2bisa1 256 GRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEK--HGNVKVITE----MLSR 319 (437)
T ss_dssp SCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHT--CTTEEEECS----CCCH
T ss_pred ecccccchhHHHHHhhhcccccccccccceeeeeccccc----------ccccchhhhccc--cccceeccc----cCcH
Confidence 99975 79999999999998543 46899999999865 112223333332 345566666 6778
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC
Q 036539 616 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVD 695 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~d 695 (749)
+++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||..|+|.+ .+|++++++|++++|++|.+++ ..|
T Consensus 320 ~~~~~~~~-~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll---~~~ 394 (437)
T d2bisa1 320 EFVRELYG-SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKAL---ELS 394 (437)
T ss_dssp HHHHHHHT-TCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHH---TTT
T ss_pred HHHHHHHh-hhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHH---hCC
Confidence 89999999 599999999999999999999999999999999999999876 5899999999999999997654 257
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 696 PTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 696 p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++.+++|++++++.+ ++|||+.++++++++|+.
T Consensus 395 ~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~iY~~ 427 (437)
T d2bisa1 395 RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 427 (437)
T ss_dssp TSCTHHHHHHHHHHH-HHSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 889999999999998 579999999999999973
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-37 Score=332.22 Aligned_cols=365 Identities=16% Similarity=0.184 Sum_probs=248.5
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|++++.+++| .||.++++. +||++|+++||+|+ |+|+...... ..
T Consensus 2 i~f~~~~y~p----------~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-------------~~ 46 (370)
T d2iw1a1 2 VAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC-------------PK 46 (370)
T ss_dssp EEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------CT
T ss_pred EEEEecCCCC----------CCCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCCC-------------CC
Confidence 7888777764 399999999 77778899999999 9986532110 12
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+..+.++|...... ......|...+...+.. ..+|+||.+....++. .. ..+..
T Consensus 47 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---~~~d~v~~~~~~~~~~-----------~~-~~~~~ 100 (370)
T d2iw1a1 47 AFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLD-----------VY-FAADV 100 (370)
T ss_dssp TCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCS-----------EE-ECCSC
T ss_pred ceEEEEcCcccccc-----------chhhHHHHHHHHHHHHh---cccceeeecccCchHH-----------HH-HHhhc
Confidence 45677777543210 00112333333333333 4899999876543211 10 11110
Q ss_pred ccccc-CCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 401 EKTKY-EDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 401 ~~~k~-~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
....+ .............++....+....+....++.+++.+....+. +....+++ ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~--~~ 159 (370)
T d2iw1a1 101 CYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIAD-------------------FQKHYQTE--PE 159 (370)
T ss_dssp CHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHH-------------------HHHHHCCC--GG
T ss_pred ccceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEecHHHHHH-------------------HHHhcCCC--cc
Confidence 00000 0000000011111111111112223345678888888776551 11122444 67
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.++|||+|.+.+.+......+ ...++.+|+ +.++++|+++||+.+.||++.+++|++++.+
T Consensus 160 ~i~vi~~gv~~~~~~~~~~~~~~---------------~~~r~~~~~--~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~ 222 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALASLPE 222 (370)
T ss_dssp GEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHTSCH
T ss_pred eEEEEEeecccccccccCchhhh---------------hhhhhccCC--CccceEEEEEeccccccchhhhccccccccc
Confidence 89999999998876543211111 112345676 6788999999999999999999999999987
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++..++++|++.. .+.++++++++++.++++|+|.+. ++..+|+. +|++|+||..|+||
T Consensus 223 ~~~~~~~~ii~g~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-adv~v~ps~~E~~~ 283 (370)
T d2iw1a1 223 SLRHNTLLFVVGQDK------------PRKFEALAEKLGVRSNVHFFSGRN------DVSELMAA-ADLLLHPAYQEAAG 283 (370)
T ss_dssp HHHHTEEEEEESSSC------------CHHHHHHHHHHTCGGGEEEESCCS------CHHHHHHH-CSEEEECCSCCSSC
T ss_pred ccccceeeecccccc------------cccccccccccccccccccccccc------cccccccc-cccccccccccccc
Confidence 777788888887766 356788899999999999999433 58888985 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEE-CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI-DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv-~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
++++|||+||+|||+|+.||.+|++.++.+|+++ +|+|+++++++|.++ ++||+.+++|+++|++++ +.|+|..
T Consensus 284 ~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~l----l~d~~~~~~~~~~ar~~~-~~~~~~~ 358 (370)
T d2iw1a1 284 IVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKA----LTQSPLRMAWAENARHYA-DTQDLYS 358 (370)
T ss_dssp HHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHH----HHCHHHHHHHHHHHHHHH-HHSCCSC
T ss_pred ceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHHH-HHhChhH
Confidence 9999999999999999999999999999999766 789999999999654 479999999999999998 5566666
Q ss_pred HHHHHHHHHH
Q 036539 719 YANKMLNMGC 728 (749)
Q Consensus 719 ~a~~ll~ly~ 728 (749)
+.+++.++|.
T Consensus 359 ~~~~~~~ii~ 368 (370)
T d2iw1a1 359 LPEKAADIIT 368 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666666653
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=4.8e-25 Score=218.01 Aligned_cols=169 Identities=20% Similarity=0.212 Sum_probs=139.9
Q ss_pred hhcCccCCCCCcEEEEEeccc-CCCCHHHHHHHHHHhHc--cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 522 EHIGYLADRKKPIIFSMARLD-VVKNLTGLTEWYGKNKR--LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~--~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
+++|+ +++++|+|+||++ ++||++.+++|+..+.. ..++++|+|+|.|.. ........+.+.+
T Consensus 25 ~~~~l---~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~~~~~~~~~- 90 (196)
T d2bfwa1 25 SKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKH- 90 (196)
T ss_dssp HHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHHC-
T ss_pred HHhCC---CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeeccc----------chhhhhhhhhhcc-
Confidence 45776 5778899999997 58999999999999854 357899999998854 1122233333443
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
...+.+.| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.+ .+|++++|+|+
T Consensus 91 -~~~~~~~~----~~~~~~l~~~~~~-~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~ 163 (196)
T d2bfwa1 91 -GNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDP 163 (196)
T ss_dssp -TTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCH
T ss_pred -ceeEEeee----ccccccchhcccc-ccccccccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCCH
Confidence 34556666 7778999999995 99999999999999999999999999999999999999865 58999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
++++++|.+++. .+++.+++|+++|++++ .+||
T Consensus 164 ~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a-~~fs 196 (196)
T d2bfwa1 164 GELANAILKALE---LSRSDLSKFRENCKKRA-MSFS 196 (196)
T ss_dssp HHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HhCC
Confidence 999999976552 58999999999999998 5586
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=5.4e-24 Score=237.72 Aligned_cols=322 Identities=12% Similarity=0.042 Sum_probs=218.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.... ..-|+|+.|.+...+++..+.++ .+.+++++.|... +.++.. ..+ + ....-...+.
T Consensus 111 ~fA~~l~~~~-~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pf----P~~~~f-r~l-p------~~~~il~~ll 177 (456)
T d1uqta_ 111 LLADKLLPLL-QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPF----PTPEIF-NAL-P------TYDTLLEQLC 177 (456)
T ss_dssp HHHHHHGGGC-CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCC----CCHHHH-TTS-T------THHHHHHHHT
T ss_pred HHHHHHHHhc-cCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCC----CChHHh-ccC-c------chHHHHHHhh
Confidence 3344444432 34589999998887777766655 4678999999753 222211 100 0 0011233677
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.+|.|...+...+............. -.....++... ..++.++|+|+|.+.|.+....... +.+.
T Consensus 178 ~~d~igf~~~~~~~~fl~~~~~ll~~-------~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~-----~~~~ 245 (456)
T d1uqta_ 178 DYDLLGFQTENDRLAFLDCLSNLTRV-------TTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLP-----PKLA 245 (456)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHHSCE-------EEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCC-----HHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHhCc-------ccccCCeEEecCceeeeeeecCcccchhhhhhcccHHH-----HHHH
Confidence 89999998876654222111000000 00000011111 2378899999998876432111000 0000
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
+ .... ..++++|+++||+++.||++.+++|+.++.+.+| .+.|+++|.+.. +...++.+..
T Consensus 246 ~----------l~~~--~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~---~~~~~~~~~~ 310 (456)
T d1uqta_ 246 Q----------LKAE--LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIR 310 (456)
T ss_dssp H----------HHHH--TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHH
T ss_pred H----------HHHh--cCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcc---cchHHHHHHH
Confidence 0 0011 3578899999999999999999999999976655 467888887755 3334444445
Q ss_pred HHHHHHHHH-------cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc-----EEEc
Q 036539 588 KKMHALMEK-------YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP-----TFAT 655 (749)
Q Consensus 588 ~~l~~li~~-------~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP-----VVat 655 (749)
.++.+++.+ .+..+.+.+.+ .++..++..+|+. ||++++||..||||++++|||+||+| +|+|
T Consensus 311 ~ev~~lv~~in~~~~~~~~~~~v~~~~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS 385 (456)
T d1uqta_ 311 HQLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLS 385 (456)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEE
T ss_pred HHHHHHHHHHHhhhccCCCCceeeccC----CcCHHHHhHHHhh-hceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEe
Confidence 555555444 25567788887 7889999999994 99999999999999999999999999 8999
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 656 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+.+|+++.+.+ |++++|.|++++|++|.+++ ..+++.++++.+++++++ .+||+...++.+++-++
T Consensus 386 ~~~G~~~~l~~---g~lVnP~d~~~~A~ai~~aL---~~~~~er~~~~~~~~~~v-~~~~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 386 QFAGAANELTS---ALIVNPYDRDEVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLK 451 (456)
T ss_dssp TTBGGGGTCTT---SEEECTTCHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHhCC---eEEECcCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH
Confidence 99999999954 79999999999999997654 247789999999999999 57999999888877544
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=5.1e-22 Score=191.04 Aligned_cols=152 Identities=24% Similarity=0.355 Sum_probs=124.0
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
...++|+||+.+.||++.+++|+.+++ +.+|+|+|.+... . +.+.+.+.+.+.. .++|+|+|
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l~----~~~l~ivg~~~~~-----~----~~~~~~~~~~~~~-~~~v~~~g---- 73 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKLQ----DEKLYIVGWFSKG-----D----HAERYARKIMKIA-PDNVKFLG---- 73 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHCT----TSCEEEEBCCCTT-----S----THHHHHHHHHHHS-CTTEEEEE----
T ss_pred CCEEEEEecCccccCHHHHHHHHHHhc----CCeEEEEEecccc-----c----chhhhhhhhcccc-cCcEEEee----
Confidence 356889999999999999999998874 5789999987651 1 1333444444443 46899999
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
.++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++
T Consensus 74 ~~~~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~-- 149 (166)
T d2f9fa1 74 SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS-- 149 (166)
T ss_dssp SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH--
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH--
Confidence 7788999999995 99999999999999999999999999999999999999999999998865 8999999997665
Q ss_pred hcCCHHHHHHHHHHHHHHH
Q 036539 692 CKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 692 l~~dp~~~~~ms~~a~~~v 710 (749)
+|++ ++++++++++
T Consensus 150 --~~~~---~~~~~~~~~a 163 (166)
T d2f9fa1 150 --KNPD---KFKKDCFRRA 163 (166)
T ss_dssp --HCTT---TTHHHHHHHH
T ss_pred --hCHH---HHHHHHHHHH
Confidence 5654 2344455554
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.19 E-value=2.8e-10 Score=120.21 Aligned_cols=78 Identities=17% Similarity=0.110 Sum_probs=59.9
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceE
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG--------PAEIIVDGVSG 670 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G 670 (749)
..++|.+.| +++..++ ++ .+|+||..+- ..|+.|||++|+|+|+....+ .++.+.+...|
T Consensus 268 ~~~~v~i~~----~~p~~~l---l~-~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g 335 (391)
T d1pn3a_ 268 DGADCFVVG----EVNLQEL---FG-RVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVG 335 (391)
T ss_dssp CCTTCCEES----SCCHHHH---HT-TSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSE
T ss_pred CCCCEEEec----ccCHHHH---Hh-hccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCE
Confidence 457899998 6766655 45 5999998853 469999999999999976544 35566676789
Q ss_pred EEECCCC--HHHHHHHHHHH
Q 036539 671 FHIDPYN--GDESSDKIADF 688 (749)
Q Consensus 671 ~lv~p~d--~e~lA~aI~~~ 688 (749)
..++..+ +++++++|.++
T Consensus 336 ~~l~~~~~~~~~l~~~i~~~ 355 (391)
T d1pn3a_ 336 VAVDGPVPTIDSLSAALDTA 355 (391)
T ss_dssp EEECCSSCCHHHHHHHHHHH
T ss_pred EEcCcCCCCHHHHHHHHHHH
Confidence 9998765 78899999654
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=2.8e-09 Score=111.06 Aligned_cols=112 Identities=13% Similarity=-0.000 Sum_probs=77.7
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---c----cccccccCceEE
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---G----PAEIIVDGVSGF 671 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G---G----~~EiI~dg~~G~ 671 (749)
...++...++.. ++..+|+. +|++|.-+ =+.|+.||+++|+|+|+.... + .++.+++...|+
T Consensus 229 ~~~~~~v~~f~~------~~~~lm~~-adl~It~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~ 297 (351)
T d1f0ka_ 229 GQPQHKVTEFID------DMAAAYAW-ADVVVCRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAK 297 (351)
T ss_dssp TCTTSEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEE
T ss_pred ccccceeeeehh------hHHHHHHh-Cchhhccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEE
Confidence 345677777533 46788885 99998863 248999999999999986432 2 244555666888
Q ss_pred EECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 672 HIDPYN--GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 672 lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
.++..+ .+.+.++| ..+ +++.+.+|++++++.. ....++.+++.++++.+
T Consensus 298 ~~~~~~~~~e~l~~~l----~~l--~~~~~~~~~~~~~~~~-~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 298 IIEQPQLSVDAVANTL----AGW--SRETLLTMAERARAAS-IPDATERVANEVSRVAR 349 (351)
T ss_dssp ECCGGGCCHHHHHHHH----HTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHT
T ss_pred EechhhCCHHHHHHHH----Hhh--CHHHHHHHHHHHHccC-CccHHHHHHHHHHHHHh
Confidence 886433 45555555 333 7788889999988653 44568888888888754
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.07 E-value=8.8e-10 Score=116.70 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEE
Q 036539 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHI 673 (749)
Q Consensus 598 ~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv 673 (749)
.+.++|++.+ +++..++. . .+|++|. .+-..++.||+++|+|+|+....+ .++.+++...|..+
T Consensus 283 ~~~~~v~~~~----~~p~~~ll---~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l 350 (401)
T d1rrva_ 283 DDRDDCFAID----EVNFQALF---R-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (401)
T ss_dssp CCCTTEEEES----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCcHHHh---h-hccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc
Confidence 3568999998 67666654 4 5999986 456689999999999999976655 56666676789999
Q ss_pred CCCC--HHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 674 DPYN--GDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 674 ~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
+..+ ++.++++|.++ + +|+.+++
T Consensus 351 ~~~~~~~~~L~~ai~~v----l-~~~~r~~ 375 (401)
T d1rrva_ 351 DGPTPTFESLSAALTTV----L-APETRAR 375 (401)
T ss_dssp SSSCCCHHHHHHHHHHH----T-SHHHHHH
T ss_pred CcCCCCHHHHHHHHHHH----h-CHHHHHH
Confidence 8864 78899999654 3 5655443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.87 E-value=4.4e-08 Score=102.76 Aligned_cols=78 Identities=18% Similarity=0.034 Sum_probs=59.5
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEEC
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHID 674 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~ 674 (749)
+.++|++.+ +++..++ +. .+|+||. .+.+.|+.||+++|+|+|+....+ .++.+++...|..++
T Consensus 283 ~~~nv~~~~----~~p~~~~---l~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~ 350 (401)
T d1iira_ 283 DGADCFAIG----EVNHQVL---FG-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD 350 (401)
T ss_dssp CGGGEEECS----SCCHHHH---GG-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS
T ss_pred CCCCEEEEe----ccCHHHH---Hh-hcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcC
Confidence 457899998 6666555 44 4899985 467889999999999999964444 455666666899988
Q ss_pred CC--CHHHHHHHHHHH
Q 036539 675 PY--NGDESSDKIADF 688 (749)
Q Consensus 675 p~--d~e~lA~aI~~~ 688 (749)
.. ++++++++|.++
T Consensus 351 ~~~~~~~~l~~ai~~~ 366 (401)
T d1iira_ 351 GPIPTFDSLSAALATA 366 (401)
T ss_dssp SSSCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 76 588999999654
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=5.1e-07 Score=103.69 Aligned_cols=193 Identities=12% Similarity=0.042 Sum_probs=135.4
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHH----HHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|..-+++...++++-|+..+|..+.++ +.+..++.. ...+.+++.|...+ .|..-.+.++.+.+++
T Consensus 517 ~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP----~d~~gK~iIk~I~~va 592 (796)
T d1l5wa_ 517 RTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 592 (796)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHH
T ss_pred hcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCC----chHHHHHHHHHHHHHH
Confidence 45665588999999999999999988844 333444432 11367777776654 4555566666666666
Q ss_pred HHcCC------CCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKYQL------KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~~L------~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+..+- ..+|.|+. ..+. .+.+.|-.++||-...+. .|+.|.+-+=||.-|.+.++|--|...|+.++
T Consensus 593 ~~in~dp~~~~~~kVVFle----nYdv-~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~ 667 (796)
T d1l5wa_ 593 DVINNDPLVGDKLKVVFLP----DYCV-SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK 667 (796)
T ss_dssp HHHHTCTTTGGGEEEEECS----SCCH-HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHhcCChhhccceeEEEeC----CCch-HHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHh
Confidence 54322 12688886 3333 566666668999999887 89999999999999999999999999998865
Q ss_pred --CceEEEECC------------CCHHHHHHH-------H----------------HHHH--------------------
Q 036539 667 --GVSGFHIDP------------YNGDESSDK-------I----------------ADFF-------------------- 689 (749)
Q Consensus 667 --g~~G~lv~p------------~d~e~lA~a-------I----------------~~~l-------------------- 689 (749)
++|||.|-. .|+.++-+. + ..+.
T Consensus 668 vg~eN~f~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~l~~~~~D~y~~~~df~~y 747 (796)
T d1l5wa_ 668 VGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAY 747 (796)
T ss_dssp HCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTTTCCTTCHHHHHHHH
T ss_pred cCccceEEecCchHHHHHHHhcCCChHHHhhcCHHHHHHHHHhhcCCCCCCChHHHHHHHHHHhhcCCChhhhhccHHHH
Confidence 789999943 233222111 1 0011
Q ss_pred -------HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 690 -------EACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 690 -------~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
.....||..|.+|+......+ -.||-++++++|.+
T Consensus 748 ~~~q~~v~~~Y~d~~~W~~~~~~nia~~-g~FssdR~i~eYa~ 789 (796)
T d1l5wa_ 748 VEAQKQVDVLYRDQEAWTRAAILNTARC-GMFSSDRSIRDYQA 789 (796)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHC-GGGBHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhCC-CCcChHHHHHHHHH
Confidence 122345999999988877765 57999999999987
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.54 E-value=2.2e-06 Score=98.49 Aligned_cols=193 Identities=16% Similarity=0.115 Sum_probs=138.5
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH----HHHHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG----LTEWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|..-+++...++++-|+..+|.... ++..+.++++. ...+.+++.|...+ .|..-...++.+.+++
T Consensus 541 ~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP----~d~~gK~iIk~I~~va 616 (824)
T d2gj4a1 541 EYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIG 616 (824)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCC----ccHHHHHHHHHHHHHH
Confidence 456656889999999999999999888 33444555542 12367777776544 3555556666666666
Q ss_pred HHcCCC------CcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKYQLK------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~~L~------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+..+.. .+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|.+-+=||.-|.+.++|--|...|+.++
T Consensus 617 ~~in~dp~~~~~lkVvFle----nY~v-~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~ 691 (824)
T d2gj4a1 617 DVVNHDPVVGDRLRVIFLE----NYRV-SLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEE 691 (824)
T ss_dssp HHHTTCTTTGGGEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHHhcChhhccceeEEEcC----CCch-HHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHh
Confidence 644332 2688987 4444 556666668999999887 89999999999999999999999999998865
Q ss_pred --CceEEEECC------------CCHHHHHHHHH---H------------------------------------------
Q 036539 667 --GVSGFHIDP------------YNGDESSDKIA---D------------------------------------------ 687 (749)
Q Consensus 667 --g~~G~lv~p------------~d~e~lA~aI~---~------------------------------------------ 687 (749)
++|||.|-. .|+.++-+... +
T Consensus 692 vg~~N~~~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~ 771 (824)
T d2gj4a1 692 AGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVK 771 (824)
T ss_dssp HCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTGGGHHHHHH
T ss_pred cCcccEEEeCCChhhhhHHhhcCCCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHHHhcCChhhhhccHHHHHH
Confidence 778999843 23333322111 0
Q ss_pred ---HHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 688 ---FFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 688 ---~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
-+.....||..|.+|+..+.... -.||-++++++|.+
T Consensus 772 ~q~~v~~~Y~d~~~W~~~~~~nia~~-g~FssdR~i~eY~~ 811 (824)
T d2gj4a1 772 CQERVSALYKNPREWTRMVIRNIATS-GKFSSDRTIAQYAR 811 (824)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTC-GGGBHHHHHHHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHhcC-CCcChHHHHHHHHH
Confidence 11223467999999999998886 68999999999987
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.22 E-value=0.00014 Score=76.82 Aligned_cols=248 Identities=13% Similarity=0.079 Sum_probs=154.8
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhc-CcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 366 GKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKEL-DPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~-~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
.+||+|..+.-.. .+.++++|..+++|+++.--+. .+. ++ .+.+ +... -...-+.||.-+|+|.
T Consensus 87 ~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~-rsg----~~-~~~~~de~~--------R~~iskls~~hf~~t~ 152 (373)
T d1v4va_ 87 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL-RSG----NL-KEPFPEEAN--------RRLTDVLTDLDFAPTP 152 (373)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC-CCS----CT-TSSTTHHHH--------HHHHHHHCSEEEESSH
T ss_pred cCcccccccccCccchhHHHHHHHhhhhheeecccc-ccc----cc-ccCcchhhh--------hhhhccccceeeecch
Confidence 4899999887554 6677888889999987543322 110 00 0000 1111 1224457899999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
...+.. ..-|.+ ..++.++-+ ++|. + ... ... ...
T Consensus 153 ~~~~~L--------------------~~~Ge~--~~~I~~vG~p~~D~--i---~~~-~~~----------------~~~ 188 (373)
T d1v4va_ 153 LAKANL--------------------LKEGKR--EEGILVTGQTGVDA--V---LLA-AKL----------------GRL 188 (373)
T ss_dssp HHHHHH--------------------HTTTCC--GGGEEECCCHHHHH--H---HHH-HHH----------------CCC
T ss_pred hhhhhh--------------------hhhccc--ccceeecccchhhH--H---Hhh-hhh----------------ccc
Confidence 776621 122444 556666543 2221 0 000 000 000
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
.... +.++.+++++-|-...++...+.+++..+.....++.+++...... .....+ .+......+
T Consensus 189 ~~~~--~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~----------~~~~~~---~~~~~~~~n 253 (373)
T d1v4va_ 189 PEGL--PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAV---FPVLKGVRN 253 (373)
T ss_dssp CTTC--CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHH---HHHHTTCTT
T ss_pred cccc--ccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc----------cchhhh---hhhhccccc
Confidence 1111 4456677888888877888888899888887777788776654322 111122 233445578
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
+.++. .+...+...++.. |++++--| |-.+.||.++|+|||.- +.|.-.+-++.|.+ .++ +.|++++
T Consensus 254 ~~~~~----~l~~~~~l~ll~~-s~~vignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv-~~d~~~I 321 (373)
T d1v4va_ 254 FVLLD----PLEYGSMAALMRA-SLLLVTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLA-GTDPEGV 321 (373)
T ss_dssp EEEEC----CCCHHHHHHHHHT-EEEEEESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EEC-CSCHHHH
T ss_pred ceeec----cchHHHHHHHhhh-ceeEeccc-----chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEc-CCCHHHH
Confidence 99988 7889999999994 77777654 77889999999999987 55666666666644 454 4588988
Q ss_pred HHHHHHHHHHhcCCHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~m 702 (749)
.+++.. ++.++..+.++
T Consensus 322 ~~~i~~----~l~~~~~~~~~ 338 (373)
T d1v4va_ 322 YRVVKG----LLENPEELSRM 338 (373)
T ss_dssp HHHHHH----HHTCHHHHHHH
T ss_pred HHHHHH----HHcCHHHHhhc
Confidence 888854 45888877765
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.01 E-value=0.0002 Score=75.62 Aligned_cols=80 Identities=16% Similarity=0.115 Sum_probs=52.3
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEII-VDGVSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~lv~ 674 (749)
.+++.... +.+..++.. .. .+++||.= |--.++.||+.+|+|+|+.... ..+.-+ +..+.|+.++
T Consensus 329 ~~n~~v~~----~~pq~~~l~-~p-~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~ 398 (461)
T d2acva1 329 EGKGMICG----WAPQVEVLA-HK-AIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 398 (461)
T ss_dssp HCSEEEES----SCCHHHHHH-ST-TEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCCeEEEe----cCCHHHHHh-cc-cCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEee
Confidence 35666665 444444442 23 47888876 2345999999999999996443 344444 5556898886
Q ss_pred CC--------CHHHHHHHHHHHH
Q 036539 675 PY--------NGDESSDKIADFF 689 (749)
Q Consensus 675 p~--------d~e~lA~aI~~~l 689 (749)
.. ++++++++|.+.+
T Consensus 399 ~~~~~~~~~~t~~~l~~a~~~vl 421 (461)
T d2acva1 399 VDYRKGSDVVAAEEIEKGLKDLM 421 (461)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHT
T ss_pred ccccccCCccCHHHHHHHHHHHh
Confidence 53 5678888886543
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.83 E-value=0.00047 Score=72.89 Aligned_cols=85 Identities=14% Similarity=0.095 Sum_probs=58.2
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIV-DGVSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~-dg~~G~lv~ 674 (749)
..++.... +++..++... . .+++||.- |=..++.||+.+|+|+|+....+ .+.-++ ..+.|..++
T Consensus 318 ~~nv~~~~----~~pq~~lL~h-p-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 318 RGYGMVVP----WAPQAEVLAH-E-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTTEEEES----CCCHHHHHTS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred cccccccc----cCChHhhhcc-C-ceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 46788877 6666554421 2 36778765 23459999999999999975554 344454 447899887
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHH
Q 036539 675 PY--NGDESSDKIADFFEACKVDPTY 698 (749)
Q Consensus 675 p~--d~e~lA~aI~~~l~~l~~dp~~ 698 (749)
.. +.+++.++|.+.+ +|+.+
T Consensus 388 ~~~~t~~~l~~ai~~vL----~d~~y 409 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQIL----SQEKG 409 (450)
T ss_dssp GGSCCHHHHHHHHHHHH----HSHHH
T ss_pred CCCcCHHHHHHHHHHHh----cCcHH
Confidence 65 5688888886544 78765
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.62 E-value=0.0025 Score=66.92 Aligned_cols=273 Identities=12% Similarity=0.067 Sum_probs=143.6
Q ss_pred CceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+|.++.-.. .+.++++|..+++|+++. |+-+.+. +..+...+...| ...-+.||..+++|...
T Consensus 88 kpD~v~v~GDr~e~la~a~aa~~~~Ipi~Hi-egG~~s~----~~~~~~~de~~R--------~~iskls~~hf~~t~~~ 154 (377)
T d1o6ca_ 88 KPDIVLVHGDTTTTFAGSLAAFYHQIAVGHV-EAGLRTG----NKYSPFPEELNR--------QMTGAIADLHFAPTGQA 154 (377)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHHTTCEEEEE-SCCCCCS----CTTTTTTHHHHH--------HHHHHHCSEEEESSHHH
T ss_pred ccceeEeeecccccchhhhhhhhccceEEEE-ecccccc----cccccCchhhhc--------cccccceeEEeecchhh
Confidence 899999887554 677889999999998654 4432221 001111112111 12446799999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+. ...-|.+ ..++.++-+ ++|.- ..... .......+
T Consensus 155 ~~~--------------------L~~~G~~--~~~I~~vG~~~~D~i---------~~~~~-----------~~~~~~~~ 192 (377)
T d1o6ca_ 155 KDN--------------------LLKENKK--ADSIFVTGNTAIDAL---------NTTVR-----------DGYSHPVL 192 (377)
T ss_dssp HHH--------------------HHHTTCC--GGGEEECCCHHHHHH---------HHHCC-----------SSCCCSTT
T ss_pred hhh--------------------hhhhccc--cceEeeccchhHHHH---------HHHHH-----------HHHhhhhh
Confidence 651 1222554 557766644 22210 00000 00000111
Q ss_pred CccCCCCCcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHH-HHHcCCCCc
Q 036539 525 GYLADRKKPIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHAL-MEKYQLKGQ 602 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l-i~~~~L~~~ 602 (749)
..+ ..++.++++.-|.+.. +.....+.++..+....+++.+++...... ..... .+.....++
T Consensus 193 ~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~~~~~~~~~~n 257 (377)
T d1o6ca_ 193 DQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNP--------------VVREAAHKHFGDSDR 257 (377)
T ss_dssp TTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----C--------------HHHHHHHHC--CCSS
T ss_pred hhc-cCCceEEEEeccccccccchHHHHHHHHhhccccccccccccccccc--------------ccchhhhhccccccc
Confidence 111 2344556666666543 333445555555544455666655443322 12222 233445678
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|.++. .++..+...++.. |++++-=| |-.+.||-..|+|+|.-.. +.-.+-++.| +-+++++ |.+++
T Consensus 258 i~~~~----~l~~~~fl~llk~-s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~~~~I 325 (377)
T d1o6ca_ 258 VHLIE----PLEVIDFHNFAAK-SHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-DEENI 325 (377)
T ss_dssp EEECC----CCCHHHHHHHHHH-CSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-CHHHH
T ss_pred eEecc----ccchHHHHHHHhh-hheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCC-CHHHH
Confidence 99998 7889999999996 88877543 4468899999999998643 3355566555 4466655 78888
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
.+++.. ++.++..++.+.+ ...-|-=...+++..++...|
T Consensus 326 ~~~i~~----~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~ 365 (377)
T d1o6ca_ 326 YQLAKQ----LLTDPDEYKKMSQ-----ASNPYGDGEASRRIVEELLFH 365 (377)
T ss_dssp HHHHHH----HHHCHHHHHHHHH-----CCCTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHH----HHhChHHHhhhcc-----CCCCCCCChHHHHHHHHHHHh
Confidence 888754 4467776655422 222344344555555554433
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.59 E-value=0.0028 Score=66.62 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=62.8
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEII-VDGVSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~lv~ 674 (749)
.+||.... +++..++... . .+++||.- |=..++.||+.+|+|+|+.... ..+.-+ +..+.|..++
T Consensus 345 ~~Nv~~~~----~~Pq~~lL~h-p-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIAS----WCPQDKVLNH-P-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTTEEEES----CCCHHHHHTS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred cCceEEee----eCCHHHHhcC-C-cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 47888887 7776665421 2 36778875 2345999999999999997443 345545 4446899887
Q ss_pred CC-CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 036539 675 PY-NGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 675 p~-d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 708 (749)
.. +.++++++|.+. +.||.. +++.++|.+
T Consensus 415 ~~~t~~~l~~ai~~v----l~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 415 TNVKREELAKLINEV----IAGDKG-KKMKQKAME 444 (473)
T ss_dssp SSCCHHHHHHHHHHH----HTSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH----HcCChH-HHHHHHHHH
Confidence 54 678888888654 478763 334444444
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.0038 Score=65.52 Aligned_cols=258 Identities=11% Similarity=0.088 Sum_probs=142.4
Q ss_pred CceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+|..+.-.. .+.+++++..+++|++++ |+-+.+. +..+...+...+ ...-+-||.-+|++...
T Consensus 86 kPD~v~v~GDr~e~la~a~aa~~~~ipi~Hi-egG~~s~----~~~~~~pde~~R--------~~iskls~~hf~~~~~~ 152 (376)
T d1f6da_ 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHV-EAGLRTG----DLYSPWPEEANR--------TLTGHLAMYHFSPTETS 152 (376)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEE-SCCCCCS----CTTSSTTHHHHH--------HHHHHTCSEEEESSHHH
T ss_pred cCcceeeeccccchhhHHHHHHhhCceEEEE-ecccccc----cccccCchhhhh--------hhhccceeEEEeccHHH
Confidence 899999887544 678888899999998654 4432221 111111111111 12346689999999876
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+. ...-|.+ +.++.++-+ ++|.-.. ....... .+..... .. ...
T Consensus 153 ~~~--------------------L~~~G~~--~~~I~~vG~~~~D~l~~-----~~~~~~~-~~~~~~~-----~~-~~~ 198 (376)
T d1f6da_ 153 RQN--------------------LLRENVA--DSRIFITGNTVIDALLW-----VRDQVMS-SDKLRSE-----LA-ANY 198 (376)
T ss_dssp HHH--------------------HHHTTCC--GGGEEECCCHHHHHHHH-----HHHHTTT-CHHHHHH-----HH-TTC
T ss_pred HhH--------------------HHhcCCC--ccccceecCchHHHHHH-----HHhhhhc-cchhhhh-----hh-ccc
Confidence 651 1222554 567776644 3331000 0000000 0000000 00 011
Q ss_pred CccCCCCCcEEEEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 525 GYLADRKKPIIFSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
+......+.++++.=|.+. .+++..++.++..+.....++.+++-..... ..... ..+......++
T Consensus 199 ~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~----------~~~~~---~~~~~~~~~ni 265 (376)
T d1f6da_ 199 PFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVREP---VNRILGHVKNV 265 (376)
T ss_dssp TTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHH---HHHHHTTCTTE
T ss_pred cccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccch----------hhhhh---Hhhhhcccccc
Confidence 1111233344555555543 4556777888887776666677766554322 00111 12223445789
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGDESS 682 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e~lA 682 (749)
.++. .+...+...++.. |++++-=| |--+.||-..|+|||.-..+ .-.+-+..+ +-++++ .|.+++.
T Consensus 266 ~~~~----~l~~~~fl~ll~~-a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~-~~~~~I~ 333 (376)
T d1f6da_ 266 ILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVG-TDKQRIV 333 (376)
T ss_dssp EEEC----CCCHHHHHHHHHH-CSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECC-SSHHHHH
T ss_pred eeec----cccHHHHHHHHhh-ceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECC-CCHHHHH
Confidence 9988 7778899999995 88887654 55677999999999964222 234455444 556665 4888988
Q ss_pred HHHHHHHHHhcCCHHHHH
Q 036539 683 DKIADFFEACKVDPTYWN 700 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~ 700 (749)
+++.+++ .++..+.
T Consensus 334 ~ai~~~l----~~~~~~~ 347 (376)
T d1f6da_ 334 EEVTRLL----KDENEYQ 347 (376)
T ss_dssp HHHHHHH----HCHHHHH
T ss_pred HHHHHHH----hChHhhh
Confidence 8886544 4554433
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.30 E-value=0.021 Score=59.61 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=57.6
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEE
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-VDGVSGFHI 673 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI-~dg~~G~lv 673 (749)
..++|.+.+ +++..++... . .+++||.= |=..++.||+.+|+|+|+...-+ .+..+ +.-..|...
T Consensus 332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l 401 (471)
T d2vcha1 332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 401 (471)
T ss_dssp TTTEEEEES----CCCHHHHHHS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred cCCCeeecc----cCCHHHHhcC-c-cCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEE
Confidence 457899998 7777776642 1 36788765 22459999999999999974433 34444 333577766
Q ss_pred CCC-----CHHHHHHHHHHHHHHhcCCHH
Q 036539 674 DPY-----NGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 674 ~p~-----d~e~lA~aI~~~l~~l~~dp~ 697 (749)
... +.++++++|.+.+ +|++
T Consensus 402 ~~~~~~~~t~~~l~~ai~~vl----~~~~ 426 (471)
T d2vcha1 402 RAGDDGLVRREEVARVVKGLM----EGEE 426 (471)
T ss_dssp CCCTTSCCCHHHHHHHHHHHH----TSTH
T ss_pred ecCCCCcCCHHHHHHHHHHHh----CCcH
Confidence 543 5688888886554 6764
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.83 E-value=0.23 Score=49.64 Aligned_cols=103 Identities=14% Similarity=0.007 Sum_probs=65.3
Q ss_pred CCCCcEEEE-Ee-cccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC---CCC
Q 036539 529 DRKKPIIFS-MA-RLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ---LKG 601 (749)
Q Consensus 529 ~~~k~vIl~-vG-RL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~---L~~ 601 (749)
..+++.|+. .| +..+.|. .+..++.+..+.+. +.+++++|+..+ .+....+..... ...
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e------------~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAW 242 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTT
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccch------------HHHHHHHHHhhhcccccc
Confidence 445555544 43 3344454 45577777777664 567888887654 222222222211 123
Q ss_pred cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 602 QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 602 ~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
-+.+.| ..+-.++..++.. +|++|.+. +-.+--|.++|+|+|+=
T Consensus 243 ~~~l~g----~~sl~el~~li~~-a~l~I~~D-----tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 243 CRNLAG----ETQLDQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EEECTT----TSCHHHHHHHHHT-SSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred cccccC----CccHHHHHHHHhc-ceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence 344556 6778999999995 99999985 34668899999999995
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=82.75 E-value=1.6 Score=41.33 Aligned_cols=40 Identities=35% Similarity=0.594 Sum_probs=25.0
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
+|||++|++|.= ..++| .||. ...++++|++|. |+++|..
T Consensus 1 m~~VLvi~aHPD---De~lg---~GGt---------------iak~~~~G~~V~--vv~~T~G 40 (227)
T d1uana_ 1 MLDLLVVAPHPD---DGELG---CGGT---------------LARAKAEGLSTG--ILDLTRG 40 (227)
T ss_dssp CEEEEEEESSTT---HHHHH---HHHH---------------HHHHHHTTCCEE--EEEEECC
T ss_pred CceEEEEEeCCC---hHHHH---HHHH---------------HHHHHHcCCeEE--EEEEeCC
Confidence 589999999951 12232 2441 223678999998 5566654
|