Citrus Sinensis ID: 036676

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MPFNITSIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFLRSH
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
ccccccccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHEccHHHHcccHHHHHHcccHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEEcccccccccHHHccc
mpfnitsiktssngvwqgdnpldfafPLLIVQTTLILVVSRFLAFlfrplrqpkVIAEIVGgivlgpsafgrnkefmhhifpkwstptlesvASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNtidgldqvgygPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIagdgtasggekksPVIAIWVLLSGLAFVIFMLTVIRPAMRwvarrcspehdvvDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVfgltipkggnFAERLIERIEDFVSGLLLPlyfassglktdvatIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFLRSH
MPFNITSiktssngvwqGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVlnigkekkvsfnflrsh
MPFNITSIKTSSNGVWQGDNPLDFAFPllivqttlilvvSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGllfflflvgleldlSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDvaawillalavaiaGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFLRSH
************NGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNF****
********KTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFL*S*
MPFNITSIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFLRSH
*************GVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGT*****KKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFN**R**
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooo
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooo
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
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MPFNITSIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVSFNFLRSH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
Q9M353 842 Cation/H(+) antiporter 20 yes no 0.980 0.480 0.810 1e-164
Q9SUQ7 820 Cation/H(+) antiporter 17 no no 0.939 0.473 0.608 1e-131
Q9FFR9 810 Cation/H(+) antiporter 18 no no 0.939 0.479 0.630 1e-129
Q9LUN4 800 Cation/H(+) antiporter 19 no no 0.937 0.483 0.614 1e-128
Q1HDT3 811 Cation/H(+) antiporter 16 no no 0.956 0.487 0.581 1e-122
Q9SIT5 821 Cation/H(+) antiporter 15 no no 0.927 0.466 0.544 1e-106
Q9P7I1 889 K(+)/H(+) antiporter 1 OS yes no 0.907 0.421 0.421 2e-77
P40309 873 K(+)/H(+) antiporter 1 OS yes no 0.910 0.430 0.352 7e-64
Q8VYD4 867 Cation/H(+) antiporter 23 no no 0.934 0.445 0.338 2e-55
Q9SKA9 832 Cation/H(+) antiporter 21 no no 0.912 0.453 0.342 1e-54
>sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1 Back     alignment and function desciption
 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 329/406 (81%), Positives = 366/406 (90%), Gaps = 1/406 (0%)

Query: 1   MPFNITSIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIV 60
           MPFNITS+KTSSNGVWQGDNPL+FAFPLLIVQT LI+ VSRFLA LF+PLRQPKVIAEIV
Sbjct: 1   MPFNITSVKTSSNGVWQGDNPLNFAFPLLIVQTALIIAVSRFLAVLFKPLRQPKVIAEIV 60

Query: 61  GGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRA 120
           GGI+LGPSA GRN  +M  IFPKWS P LESVASIGLLFFLFLVGLELDLSSIRRSGKRA
Sbjct: 61  GGILLGPSALGRNMAYMDRIFPKWSMPILESVASIGLLFFLFLVGLELDLSSIRRSGKRA 120

Query: 121 FVIAFAGISLPFVCGIGVAFVLRNTI-DGLDQVGYGPFLVFMGVALSITAFPVLARILAE 179
           F IA AGI+LPF+ G+GVAFV+RNT+    D+ GY  FLVFMGVALSITAFPVLARILAE
Sbjct: 121 FGIAVAGITLPFIAGVGVAFVIRNTLYTAADKPGYAEFLVFMGVALSITAFPVLARILAE 180

Query: 180 LKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAF 239
           LKLLTT++GETAM+AAAFNDVAAWILLALAVA+AG+G   GGEKKSP++++WVLLSG  F
Sbjct: 181 LKLLTTQIGETAMAAAAFNDVAAWILLALAVALAGNGGEGGGEKKSPLVSLWVLLSGAGF 240

Query: 240 VIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFG 299
           V+FML VIRP M+WVA+R SPE+DVV E+Y+CLTLAGVMVSGF TDLIGIHSIFGAFVFG
Sbjct: 241 VVFMLVVIRPGMKWVAKRGSPENDVVRESYVCLTLAGVMVSGFATDLIGIHSIFGAFVFG 300

Query: 300 LTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACA 359
           LTIPK G F +RLIERIEDFVSGLLLPLYFA+SGLKTDVA IR A+SWG+L LV+ TACA
Sbjct: 301 LTIPKDGEFGQRLIERIEDFVSGLLLPLYFATSGLKTDVAKIRGAESWGMLGLVVVTACA 360

Query: 360 GKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKV 405
           GKI+GTF VAVM+K+PARE++ LG LMNTKGLVELIVLNIGKEKKV
Sbjct: 361 GKIVGTFVVAVMVKVPAREALTLGFLMNTKGLVELIVLNIGKEKKV 406
Operates as a K(+)/H(+) antiporter that maintains K(+) homeostasis in guard cells and could regulate pH. Plays a critical role in osmoregulation through the control of stomates opening.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT3|CHX16_ARATH Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q9P7I1|KHA1_SCHPO K(+)/H(+) antiporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kha1 PE=3 SV=2 Back     alignment and function description
>sp|P40309|KHA1_YEAST K(+)/H(+) antiporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KHA1 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
255573649 847 monovalent cation:proton antiporter, put 0.975 0.475 0.844 1e-180
297740402 858 unnamed protein product [Vitis vinifera] 0.987 0.475 0.817 1e-177
147776948 859 hypothetical protein VITISV_023524 [Viti 0.975 0.469 0.825 1e-176
225440302 839 PREDICTED: cation/H(+) antiporter 20-lik 0.973 0.479 0.827 1e-176
224090288 833 cation proton exchanger [Populus trichoc 0.975 0.483 0.817 1e-176
449448910 853 PREDICTED: cation/H(+) antiporter 20-lik 0.978 0.473 0.809 1e-167
449522562 557 PREDICTED: cation/H(+) antiporter 20-lik 0.978 0.725 0.807 1e-166
357510413 851 K(+)/H(+) antiporter [Medicago truncatul 0.978 0.474 0.795 1e-164
297740403 809 unnamed protein product [Vitis vinifera] 0.970 0.495 0.762 1e-164
359481798 832 PREDICTED: cation/H(+) antiporter 20 iso 0.970 0.481 0.762 1e-163
>gi|255573649|ref|XP_002527747.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223532888|gb|EEF34660.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 342/405 (84%), Positives = 372/405 (91%), Gaps = 2/405 (0%)

Query: 1   MPFNITSIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIV 60
           MP NITSIKTSSNGVWQGDNPL FAFPLLIVQTTLILVVSRF AFLF+PLRQPKVIAEIV
Sbjct: 1   MPVNITSIKTSSNGVWQGDNPLHFAFPLLIVQTTLILVVSRFFAFLFKPLRQPKVIAEIV 60

Query: 61  GGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRA 120
           GGI+LGPSAFGRNK++M  IFPKWS   LESVASIGLLFFLFLVGLELDLSSIRRSGKRA
Sbjct: 61  GGILLGPSAFGRNKQYMQWIFPKWSILILESVASIGLLFFLFLVGLELDLSSIRRSGKRA 120

Query: 121 FVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAEL 180
           F IAFAGISLPF+CGIGVAFVLR T+ G D+VGYGPFLVFMGVALSITAFPVLARILAEL
Sbjct: 121 FGIAFAGISLPFICGIGVAFVLRRTVKGEDEVGYGPFLVFMGVALSITAFPVLARILAEL 180

Query: 181 KLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFV 240
           KLLTT+VGETA++AAAFNDV AWILLALAVA+AG    + G+ KSP+I++WVLLSG+AFV
Sbjct: 181 KLLTTQVGETALAAAAFNDVTAWILLALAVALAGK--EADGQHKSPLISLWVLLSGVAFV 238

Query: 241 IFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGL 300
           +FML VI PAM+WVA RCSP+H VV+EAY+CLTLAGVMVSGFMTDLIGIHSIFGAF+FGL
Sbjct: 239 VFMLLVIGPAMKWVASRCSPQHGVVNEAYMCLTLAGVMVSGFMTDLIGIHSIFGAFIFGL 298

Query: 301 TIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAG 360
           TIPKGG FAERLIERIEDFVSGLLLPLYFASSGLKT+VA I   ++WGLLALVI TACAG
Sbjct: 299 TIPKGGEFAERLIERIEDFVSGLLLPLYFASSGLKTNVAAIHGGRAWGLLALVIATACAG 358

Query: 361 KILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKV 405
           KI+GTF VA+M  IPARES+ LG+LMNTKGLVELIVLNIGKEKKV
Sbjct: 359 KIVGTFVVAMMFMIPARESLTLGILMNTKGLVELIVLNIGKEKKV 403

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297740402|emb|CBI30584.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147776948|emb|CAN63422.1| hypothetical protein VITISV_023524 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225440302|ref|XP_002269591.1| PREDICTED: cation/H(+) antiporter 20-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224090288|ref|XP_002308966.1| cation proton exchanger [Populus trichocarpa] gi|222854942|gb|EEE92489.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448910|ref|XP_004142208.1| PREDICTED: cation/H(+) antiporter 20-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522562|ref|XP_004168295.1| PREDICTED: cation/H(+) antiporter 20-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|357510413|ref|XP_003625495.1| K(+)/H(+) antiporter [Medicago truncatula] gi|87240332|gb|ABD32190.1| Sodium/hydrogen exchanger [Medicago truncatula] gi|355500510|gb|AES81713.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|297740403|emb|CBI30585.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359481798|ref|XP_003632674.1| PREDICTED: cation/H(+) antiporter 20 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
TAIR|locus:2084370 842 CHX20 "cation/H+ exchanger 20" 0.980 0.480 0.721 1.1e-151
TAIR|locus:2160457 810 CHX18 "cation/H+ exchanger 18" 0.937 0.477 0.563 7.8e-110
TAIR|locus:2090462 800 CHX19 "cation/H+ exchanger 19" 0.937 0.483 0.541 8.1e-108
TAIR|locus:2128484 820 CHX17 "cation/H+ exchanger 17" 0.939 0.473 0.535 4e-106
TAIR|locus:2024578 811 CHX16 "cation/H+ exchanger 16" 0.956 0.487 0.514 9.8e-103
TAIR|locus:2054152 821 CHX15 "cation/hydrogen exchang 0.927 0.466 0.481 1.6e-93
DICTYBASE|DDB_G0292830 786 nhe3 "cation/hydrogen exchange 0.869 0.456 0.393 1.2e-58
POMBASE|SPAC105.01c 889 kha1 "potassium ion/proton ant 0.825 0.383 0.401 7.4e-58
ASPGD|ASPL0000061348 883 AN1290 [Emericella nidulans (t 0.861 0.403 0.371 5.7e-56
DICTYBASE|DDB_G0290253 1008 nhe4 "cation/hydrogen exchange 0.857 0.351 0.384 9.7e-55
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
 Identities = 293/406 (72%), Positives = 328/406 (80%)

Query:     1 MPFNITSIKTSSNGVWQGDNPLDFAFPXXXXXXXXXXXXSRFLAFLFRPLRQPKVIAEIV 60
             MPFNITS+KTSSNGVWQGDNPL+FAFP            SRFLA LF+PLRQPKVIAEIV
Sbjct:     1 MPFNITSVKTSSNGVWQGDNPLNFAFPLLIVQTALIIAVSRFLAVLFKPLRQPKVIAEIV 60

Query:    61 GGIVLGPSAFGRNKEFMHHIFPKWSTPTLESVASIGXXXXXXXXXXXXXXSSIRRSGKRA 120
             GGI+LGPSA GRN  +M  IFPKWS P LESVASIG              SSIRRSGKRA
Sbjct:    61 GGILLGPSALGRNMAYMDRIFPKWSMPILESVASIGLLFFLFLVGLELDLSSIRRSGKRA 120

Query:   121 FVIAFAGISLPFVCGIGVAFVLRNTI-DGLDQVGYGPFLVFMGVALSITAFPVLARILAE 179
             F IA AGI+LPF+ G+GVAFV+RNT+    D+ GY  FLVFMGVALSITAFPVLARILAE
Sbjct:   121 FGIAVAGITLPFIAGVGVAFVIRNTLYTAADKPGYAEFLVFMGVALSITAFPVLARILAE 180

Query:   180 LKLLTTRVGETAMSAAAFNDXXXXXXXXXXXXXXGDGTASGGEKKSPVIAIWVLLSGLAF 239
             LKLLTT++GETAM+AAAFND              G+G   GGEKKSP++++WVLLSG  F
Sbjct:   181 LKLLTTQIGETAMAAAAFNDVAAWILLALAVALAGNGGEGGGEKKSPLVSLWVLLSGAGF 240

Query:   240 VIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFG 299
             V+FML VIRP M+WVA+R SPE+DVV E+Y+CLTLAGVMVSGF TDLIGIHSIFGAFVFG
Sbjct:   241 VVFMLVVIRPGMKWVAKRGSPENDVVRESYVCLTLAGVMVSGFATDLIGIHSIFGAFVFG 300

Query:   300 LTIPKGGNFAERLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACA 359
             LTIPK G F +RLIERIEDFVSGLLLPLYFA+SGLKTDVA IR A+SWG+L LV+ TACA
Sbjct:   301 LTIPKDGEFGQRLIERIEDFVSGLLLPLYFATSGLKTDVAKIRGAESWGMLGLVVVTACA 360

Query:   360 GKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKV 405
             GKI+GTF VAVM+K+PARE++ LG LMNTKGLVELIVLNIGKEKKV
Sbjct:   361 GKIVGTFVVAVMVKVPAREALTLGFLMNTKGLVELIVLNIGKEKKV 406
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0012505 "endomembrane system" evidence=IDA
GO:0030104 "water homeostasis" evidence=IMP
GO:0030007 "cellular potassium ion homeostasis" evidence=IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006623 "protein targeting to vacuole" evidence=IMP
GO:0006885 "regulation of pH" evidence=IMP
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024578 CHX16 "cation/H+ exchanger 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292830 nhe3 "cation/hydrogen exchanger 3" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC105.01c kha1 "potassium ion/proton antiporter Kha1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000061348 AN1290 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290253 nhe4 "cation/hydrogen exchanger 4" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M353CHX20_ARATHNo assigned EC number0.81030.98060.4809yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
PLN03159 832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-167
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 3e-54
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 2e-46
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 5e-33
PRK03562 621 PRK03562, PRK03562, glutathione-regulated potassiu 8e-17
COG0025429 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport 1e-07
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 4e-07
PRK03659 601 PRK03659, PRK03659, glutathione-regulated potassiu 1e-05
PRK10669 558 PRK10669, PRK10669, putative cation:proton antipor 0.002
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  489 bits (1261), Expect = e-167
 Identities = 219/395 (55%), Positives = 294/395 (74%), Gaps = 12/395 (3%)

Query: 11  SSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAF 70
           ++NG+WQGDNPLDF+ PL I+Q TL++V +R L F+ +P RQP+VI+EI+GG++LGPS  
Sbjct: 26  TTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVL 85

Query: 71  GRNKEFMHHIFPKWSTPTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISL 130
           G+++ F + IFP  S   LE++A++GLL+FLFLVG+E+D+S IRR+GK+A  IA AG++L
Sbjct: 86  GQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMAL 145

Query: 131 PFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALSITAFPVLARILAELKLLTTRVGET 190
           PF  G+  +F+       + Q   G F++F+GVALS+TAFPVLARILAE+KL+ T +G  
Sbjct: 146 PFCIGLAFSFIFHQVSRNVHQ---GTFILFLGVALSVTAFPVLARILAEIKLINTELGRI 202

Query: 191 AMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTVIRPA 250
           AMSAA  ND+ AWILLALA+A+A + + S       + ++WVLLS +AFV+F   V+RP 
Sbjct: 203 AMSAALVNDMCAWILLALAIALAENDSTS-------LASLWVLLSSVAFVLFCFYVVRPG 255

Query: 251 MRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAE 310
           + W+ RR +PE +   E YICL L GVM+SGF+TD IG HS+FGAFVFGL IP  G    
Sbjct: 256 IWWIIRR-TPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIP-NGPLGV 313

Query: 311 RLIERIEDFVSGLLLPLYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAV 370
            LIE++EDFVSGLLLPL+FA SGLKT+V  I+   +WGLL LVI  A AGKI+GT  +A 
Sbjct: 314 TLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAF 373

Query: 371 MLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKV 405
              +P RE I LG LMNTKGLVE+IVLN+G++++V
Sbjct: 374 FYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEV 408

Length = 832
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|235131 PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|179625 PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>gnl|CDD|182633 PRK10669, PRK10669, putative cation:proton antiport protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
PLN03159 832 cation/H(+) antiporter 15; Provisional 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK03562 621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669 558 putative cation:proton antiport protein; Provision 100.0
PRK03659 601 glutathione-regulated potassium-efflux system prot 100.0
KOG1650 769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK05326 562 potassium/proton antiporter; Reviewed 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 100.0
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.97
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.97
COG3263 574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.96
TIGR00840 559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.95
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.92
KOG1965 575 consensus Sodium/hydrogen exchanger protein [Inorg 99.81
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.64
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.53
KOG1966 670 consensus Sodium/hydrogen exchanger protein [Inorg 99.26
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.14
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.12
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.1
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.08
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.05
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.91
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.86
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 98.22
TIGR00698335 conserved hypothetical integral membrane protein. 97.92
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 97.85
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 97.83
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 97.77
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 97.76
TIGR00832328 acr3 arsenical-resistance protein. The first prote 97.43
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 97.27
COG3493438 CitS Na+/citrate symporter [Energy production and 97.25
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 97.17
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 97.16
COG0385319 Predicted Na+-dependent transporter [General funct 97.06
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.9
TIGR00932 273 2a37 transporter, monovalent cation:proton antipor 96.69
COG2855334 Predicted membrane protein [Function unknown] 96.68
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 96.48
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 96.47
PRK03818 552 putative transporter; Validated 96.45
PRK03562621 glutathione-regulated potassium-efflux system prot 96.43
PF03956191 DUF340: Membrane protein of unknown function (DUF3 96.39
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 96.27
TIGR00841286 bass bile acid transporter. Functionally character 96.25
PRK03659601 glutathione-regulated potassium-efflux system prot 96.15
TIGR03802 562 Asp_Ala_antiprt aspartate-alanine antiporter. All 96.12
PRK10669 558 putative cation:proton antiport protein; Provision 95.95
PF03601 305 Cons_hypoth698: Conserved hypothetical protein 698 95.87
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 95.37
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.32
PRK05326 562 potassium/proton antiporter; Reviewed 95.05
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 94.98
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 94.95
PRK04972 558 putative transporter; Provisional 94.67
TIGR00698 335 conserved hypothetical integral membrane protein. 94.26
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 94.22
COG2855 334 Predicted membrane protein [Function unknown] 94.11
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 94.06
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 93.99
PLN03159 832 cation/H(+) antiporter 15; Provisional 93.97
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 93.06
COG3180352 AbrB Putative ammonia monooxygenase [General funct 92.68
TIGR00808254 malonate_madM malonate transporter, MadM subunit. 92.47
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 92.4
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.19
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 92.02
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 91.86
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 91.54
PRK09903314 putative transporter YfdV; Provisional 91.45
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 91.39
PRK04972558 putative transporter; Provisional 91.38
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 90.81
COG2985 544 Predicted permease [General function prediction on 90.73
PF00999 380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 90.19
COG4651 408 RosB Kef-type K+ transport system, predicted NAD-b 89.02
PRK03818552 putative transporter; Validated 86.57
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 84.32
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 83.56
PF03956191 DUF340: Membrane protein of unknown function (DUF3 82.54
COG0025 429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 82.24
COG2431297 Predicted membrane protein [Function unknown] 81.31
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 80.65
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-56  Score=474.92  Aligned_cols=394  Identities=55%  Similarity=0.998  Sum_probs=348.3

Q ss_pred             cccccCCCcccCCCCcccchHHHHHHHHHHHHHHHHHHHhhcccCCChhHHHHHHHHhhchhccCCcchhhcccCCCCch
Q 036676            7 SIKTSSNGVWQGDNPLDFAFPLLIVQTTLILVVSRFLAFLFRPLRQPKVIAEIVGGIVLGPSAFGRNKEFMHHIFPKWST   86 (413)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~r~~iP~ivg~il~GillGp~~l~~~~~~~~~l~~~~~~   86 (413)
                      |.+.+|+|+|+|+||++|++++++++++++++++.+++.++||+|+|+++|||++|+++||+++|.++.+.+.++|.+..
T Consensus        22 ~~~~~s~g~~~g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~~~~~fp~~~~  101 (832)
T PLN03159         22 PMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIFPLRSV  101 (832)
T ss_pred             CCCccCCcccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhhhhhcCCcchH
Confidence            45889999999999999999999999999999999999999999999999999999999999999998777888887777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcChHHHHhcCcchhHHHHHHhHHHHHHHHHHHHHhhhhcccCCCCCCchHHHHHHHHhh
Q 036676           87 PTLESVASIGLLFFLFLVGLELDLSSIRRSGKRAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVFMGVALS  166 (413)
Q Consensus        87 ~~~~~l~~lgl~~l~F~~Gle~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lg~~~s  166 (413)
                      +.++.++++|++++||.+|+|+|++.+||++|+++.+++.++++|+++++.+..+++...   .........+++|.++|
T Consensus       102 ~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~~---~~~~~~~~~l~~g~alS  178 (832)
T PLN03159        102 MVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVS---RNVHQGTFILFLGVALS  178 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccchhHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999988877664321   11112245788999999


Q ss_pred             hcchHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 036676          167 ITAFPVLARILAELKLLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAFVIFMLTV  246 (413)
Q Consensus       167 ~ts~~vv~~il~~~~~~~~~~~~~~l~~a~~~D~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v  246 (413)
                      .||.+++.++++|+|+.+++.|+++++.++++|+.+++++++...+...+       .......+.++..+++.+++.++
T Consensus       179 ~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~-------~~~~~~l~~~l~~~~f~~~~~~v  251 (832)
T PLN03159        179 VTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAEND-------STSLASLWVLLSSVAFVLFCFYV  251 (832)
T ss_pred             HhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CcchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999887665433       11222334555566677777788


Q ss_pred             HHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHhhcCCCCCchHHHHHHHHHhhHhhhhh
Q 036676          247 IRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGNFAERLIERIEDFVSGLLLP  326 (413)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~g~s~~lgaf~aGl~l~~~~~~~~~~~~~i~~~~~~~f~p  326 (413)
                      .+++++|+.|+.+ ++++.++.+..+++..+++++++++.+|+|+++|||++|+++++ .+.++++.++++++..++|.|
T Consensus       252 ~r~~~~~~~r~~~-~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~-~~~~~~l~ekle~~~~~lflP  329 (832)
T PLN03159        252 VRPGIWWIIRRTP-EGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLP  329 (832)
T ss_pred             HHHHHHHHHHhCc-CCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCC-cchHHHHHHHHHHHHHHHHHH
Confidence            8999999999987 55666788888888888899999999999999999999999998 788899999999999999999


Q ss_pred             HHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHhhchhhHHHHHHHHhhhcccc
Q 036676          327 LYFASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVMLKIPARESIVLGVLMNTKGLVELIVLNIGKEKKVS  406 (413)
Q Consensus       327 lfF~~~G~~ld~~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~l~~rg~~~lv~a~~a~~~gii  406 (413)
                      +||+.+|+++|+..+.+...|...+.++++++++|+++++++++++|.++||++.+|+.|++||+++++++.++++.|++
T Consensus       330 lFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~gvi  409 (832)
T PLN03159        330 LFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVL  409 (832)
T ss_pred             HHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhcCcc
Confidence            99999999999988865334655566777789999999999999999999999999999999999999999999999999


Q ss_pred             cccccc
Q 036676          407 FNFLRS  412 (413)
Q Consensus       407 ~~~~~s  412 (413)
                      +++.|+
T Consensus       410 ~~~~f~  415 (832)
T PLN03159        410 DDESFA  415 (832)
T ss_pred             Cchhhh
Confidence            999886

>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>TIGR00808 malonate_madM malonate transporter, MadM subunit Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK09903 putative transporter YfdV; Provisional Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2431 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.87
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.73
2l0e_A33 Sodium/hydrogen exchanger 1; transmembrane helix, 92.94
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.87  E-value=2.1e-21  Score=188.29  Aligned_cols=275  Identities=18%  Similarity=0.193  Sum_probs=198.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcChHHH----HhcCc--chhHHHHHHhHHHHHHHHHHHHHhhhhcccCCCCCCchHHHH
Q 036676           87 PTLESVASIGLLFFLFLVGLELDLSSI----RRSGK--RAFVIAFAGISLPFVCGIGVAFVLRNTIDGLDQVGYGPFLVF  160 (413)
Q Consensus        87 ~~~~~l~~lgl~~l~F~~Gle~~~~~l----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  160 (413)
                      +..+.+.+-.+.+.+|.+|+|+|.+.+    |+.+|  .....++.++++|+++.    ..++...         .++..
T Consensus        58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy----~~~~~~~---------~~~~~  124 (388)
T 1zcd_A           58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLY----LAFNYAD---------PITRE  124 (388)
T ss_dssp             EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHH----GGGCCSS---------TTHHH
T ss_pred             cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHH----HHHhcCC---------hhhhh
Confidence            456779999999999999999999977    55544  36778889999999873    2233211         34556


Q ss_pred             HHHHhhhcchHHHHHHHHHhc-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHH
Q 036676          161 MGVALSITAFPVLARILAELK-LLTTRVGETAMSAAAFNDVAAWILLALAVAIAGDGTASGGEKKSPVIAIWVLLSGLAF  239 (413)
Q Consensus       161 lg~~~s~ts~~vv~~il~~~~-~~~~~~~~~~l~~a~~~D~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (413)
                      -..+.++||.+....++...+ +.++..++.+++.+++||+.+++++++.+.   .+       .+....    ....+.
T Consensus       125 gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~~-------~~~~~l----~~~~~~  190 (388)
T 1zcd_A          125 GWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---ND-------LSMASL----GVAAVA  190 (388)
T ss_dssp             HTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---CC-------CCHHHH----HHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---CC-------ccHHHH----HHHHHH
Confidence            666778999999999999976 356677899999999999999999998852   11       222211    111111


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHhhcCCCC----CchHHHHHH
Q 036676          240 VIFMLTVIRPAMRWVARRCSPEHDVVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGG----NFAERLIER  315 (413)
Q Consensus       240 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~g~s~~lgaf~aGl~l~~~~----~~~~~~~~~  315 (413)
                      .     ..   ..++.|+..      ++......+  .+.+.+.++..|+|+.+|+|++|+++|+..    +..++++++
T Consensus       191 ~-----~~---~~~l~r~~v------~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~  254 (388)
T 1zcd_A          191 I-----AV---LAVLNLCGA------RRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHV  254 (388)
T ss_dssp             H-----HH---HHHHHHTTC------CCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHH
T ss_pred             H-----HH---HHHHHHhcc------hhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHH
Confidence            1     11   112222221      112222223  234456679999999999999999999842    346889999


Q ss_pred             HHHhhHhhhhhHH-HHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCchhHHHHHH
Q 036676          316 IEDFVSGLLLPLY-FASSGLKTDVATIRDAKSWGLLALVITTACAGKILGTFAVAVML----------KIPARESIVLGV  384 (413)
Q Consensus       316 i~~~~~~~f~plf-F~~~G~~ld~~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~----------~~~~~~~~~~g~  384 (413)
                      +++....++.|+| |+..|.++|....... .-...+.+.+..+++|.++++..++..          |.+|||...+|+
T Consensus       255 l~p~v~~~ilPlFaFanaGv~l~~~~~~~l-~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~  333 (388)
T 1zcd_A          255 LHPWVAYLILPLFAFANAGVSLQGVTLDGL-TSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGI  333 (388)
T ss_dssp             HHHHHHHTHHHHHHHHHCCCCCSSSCCCTH-HHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCeeecccchhhc-cChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHH
Confidence            9999888999999 9999999998533221 111122345556899999966666555          899999999999


Q ss_pred             HhhchhhHHHHHHHHhhhccc
Q 036676          385 LMNTKGLVELIVLNIGKEKKV  405 (413)
Q Consensus       385 ~l~~rg~~~lv~a~~a~~~gi  405 (413)
                      .++.+++++++++.++++.+.
T Consensus       334 L~gigftmsL~Ia~laf~~~~  354 (388)
T 1zcd_A          334 LCGIGFTMSIFIASLAFGSVD  354 (388)
T ss_dssp             HTTCCHHHHHHHHHHHSTTSS
T ss_pred             HhccchHHHHHHHHHhccCCc
Confidence            999999999999999998876
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00