Citrus Sinensis ID: 036712
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1020 | 2.2.26 [Sep-21-2011] | |||||||
| Q8GZ42 | 1043 | Histone-lysine N-methyltr | no | no | 0.900 | 0.881 | 0.548 | 0.0 | |
| Q9M364 | 1018 | Histone-lysine N-methyltr | yes | no | 0.866 | 0.868 | 0.547 | 0.0 | |
| Q9SUE7 | 1027 | Histone-lysine N-methyltr | no | no | 0.879 | 0.873 | 0.556 | 0.0 | |
| P0CB22 | 1083 | Histone-lysine N-methyltr | no | no | 0.408 | 0.385 | 0.326 | 3e-55 | |
| Q9C5X4 | 1062 | Histone-lysine N-methyltr | no | no | 0.409 | 0.393 | 0.321 | 2e-54 | |
| Q4PB36 | 1468 | Histone-lysine N-methyltr | N/A | no | 0.142 | 0.098 | 0.537 | 8e-41 | |
| Q9Y7R4 | 920 | Histone-lysine N-methyltr | yes | no | 0.144 | 0.159 | 0.513 | 6e-37 | |
| P38827 | 1080 | Histone-lysine N-methyltr | yes | no | 0.137 | 0.129 | 0.514 | 6e-37 | |
| Q75D88 | 975 | Histone-lysine N-methyltr | yes | no | 0.140 | 0.146 | 0.503 | 3e-36 | |
| Q54HS3 | 1486 | Histone-lysine N-methyltr | yes | no | 0.140 | 0.096 | 0.466 | 3e-35 |
| >sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5 OS=Arabidopsis thaliana GN=ATX5 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/959 (54%), Positives = 678/959 (70%), Gaps = 40/959 (4%)
Query: 92 RPPALKPSKGRTQILPSRYDDSVLVVGDTDSSFDEEDDVDIIEVNGDFDKLGFTMDKYRF 151
RPP +K S+GR Q+LPSR++DSV+ ++ +++ E + ++ +K +
Sbjct: 95 RPPLVKTSRGRVQVLPSRFNDSVI------ENWRKDNKSSGEEREEEIEEEACRKEKVKV 148
Query: 152 GNSNY----RGYNGFDPREYLVSRRPVMPAGNVNSLPMAGKKQFMPGFSSRNVERITKEK 207
+++ + F PR Y S + + ++ F + + +
Sbjct: 149 SSNHSLKIKQQETKFTPRNYKYSSSSALCGEIDDEDKCEEIVRYGNSFEMKKQRYV--DD 206
Query: 208 EKKKKRKDVYKPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMF 267
E + K++ VY PEDF GDLVW K GR+ P WPA+VIDP+ QAPE VLR CIP CVMF
Sbjct: 207 EPRPKKEGVYGPEDFYSGDLVWGKSGRNEPFWPAIVIDPMTQAPELVLRSCIPDAACVMF 266
Query: 268 FGYSKNGTQRDYGWVKQGMLFPFAEFMDKC-EPTQLHKSKISGFQIALEEAVLAENGFL- 325
FG+S +RDY WV++GM+FPF +++++ E ++L FQ+ALEEA+LA+ GF
Sbjct: 267 FGHSGTENERDYAWVRRGMIFPFVDYVERLQEQSELRGCNPRDFQMALEEALLADQGFTE 326
Query: 326 ----DLNLGIG-QIGPEAYSRRGQEATGSGQDLEYCPQNQNAC-YKVARVCDGCGLFRPC 379
D+++ G Q ++ R +EA GS Q L++ +Q+ Y+ R C GCG+
Sbjct: 327 KLMQDIHMAAGNQTFDDSVYRWVEEAAGSSQYLDHVAPSQDMKKYRNPRACVGCGMVLSF 386
Query: 380 KL-KRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECD 438
K+ ++MK L+ Q LC+ CSKL K + CGICK IW+H DS +WV CDGC VW+H+ CD
Sbjct: 387 KMAQKMKALIPGDQLLCQPCSKLTKPKHVCGICKRIWNHLDSQSWVRCDGCKVWIHSACD 446
Query: 439 EISGKHFKDLEHIDYYCPNCRVKFKFQSSNIGKWQPGVSAVENDGQMVLPDKIMVVCNDV 498
+IS KHFKDL DYYCP CR KF F+ S+ K +N+ MVLPDK++VVC+ V
Sbjct: 447 QISHKHFKDLGETDYYCPTCRTKFDFELSDSEKPDSKSKLGKNNAPMVLPDKVIVVCSGV 506
Query: 499 EGAYFPKLHLVVCRCRSCGPKKLTLSEWERHTGCRAKKWKYSVKVLGTMLPLGKWTMQIT 558
EG YFP LHLVVC+C SCGP++ LSEWERHTG +AK W+ SVKV + LPL +W M++
Sbjct: 507 EGIYFPSLHLVVCKCGSCGPERKALSEWERHTGSKAKNWRTSVKVKSSKLPLEEWMMKLA 566
Query: 559 EF--NADAMDP-----VKLDEKKLLAFMKEKYEPVSVKWTTERCAICRWVEDWDYNKIII 611
EF NA A P +K +++LL+F++EKYEPV+VKWTTERCA+CRWVEDWDYNKIII
Sbjct: 567 EFHANATAAKPPKRPSIKQRKQRLLSFLREKYEPVNVKWTTERCAVCRWVEDWDYNKIII 626
Query: 612 CNRCQIAVHQECYGVTDVQDFTSWVCRACEMPNAER-------KWGALKPTDVQTLWVHV 664
CNRCQIAVHQECYG +V+DFTSWVC+ACE P +R K GALKPTDV+TLWVHV
Sbjct: 627 CNRCQIAVHQECYGTRNVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDVETLWVHV 686
Query: 665 TCAWFRPEIGFLNHEKMEPATGILRIPTNLFLKSCIICKQTHGSCTQCCKCATYFHAMCA 724
TCAWF+PE+ F + EKMEPA GIL IP++ F+K C+ICKQ HGSCTQCCKC+TY+HAMCA
Sbjct: 687 TCAWFQPEVCFASEEKMEPALGILSIPSSNFVKICVICKQIHGSCTQCCKCSTYYHAMCA 746
Query: 725 SRAGYCMEIHSLERYGKQITRKLIYCAVHRTPNPDAVVAFHTPTGVFAGRSLLQNQRGCF 784
SRAGY ME+H LE+ G+QIT+ + YC+ HR PNPD V+ TP+GVF+ +SL+QN++
Sbjct: 747 SRAGYRMELHCLEKNGRQITKMVSYCSYHRAPNPDTVLIIQTPSGVFSAKSLVQNKKK-- 804
Query: 785 RGSRLVSAKRTEDSESPSPDTNDFEPLSASRCRVFKRSKN--KSMEREPICHRPMGPRHH 842
G+RL+ A R E ES + DT +P S++RCR++KR+ N K + E I H G RHH
Sbjct: 805 SGTRLILANREEIEESAAEDTIPIDPFSSARCRLYKRTVNSKKRTKEEGIPHYTGGLRHH 864
Query: 843 SLDAVISLNTYKEV-DKPEIFSSFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEG 901
A+ +LN ++ V ++P+ FSSF+ERL+HLQRTE RVCFG+SGIHGWGLFARR+IQEG
Sbjct: 865 PSAAIQTLNAFRHVAEEPKSFSSFRERLHHLQRTEMERVCFGRSGIHGWGLFARRNIQEG 924
Query: 902 EMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGNIARLINHSCMPN 961
EMV+EYRGEQV IADLRE +YR+EGKDCYLFKISEEVV+DAT KGNIARLINHSCMPN
Sbjct: 925 EMVLEYRGEQVRGIIADLREARYRREGKDCYLFKISEEVVVDATEKGNIARLINHSCMPN 984
Query: 962 CYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFMN 1020
CYARIMSVGD ESRIVLIAKT V++ +ELTYDYLFDPDE DE KVPCLCK+PNCR FMN
Sbjct: 985 CYARIMSVGDDESRIVLIAKTTVASCEELTYDYLFDPDEPDEFKVPCLCKSPNCRKFMN 1043
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Histone methyltransferase. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q9M364|ATX3_ARATH Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana GN=ATX3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4 OS=Arabidopsis thaliana GN=ATX4 PE=2 SV=3 | Back alignment and function description |
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| >sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9C5X4|ATX1_ARATH Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4PB36|SET1_USTMA Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SET1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9Y7R4|SET1_SCHPO Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P38827|SET1_YEAST Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SET1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q75D88|SET1_ASHGO Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SET1 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q54HS3|SET1_DICDI Histone-lysine N-methyltransferase set1 OS=Dictyostelium discoideum GN=set1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1020 | ||||||
| 255564717 | 1057 | trithorax, putative [Ricinus communis] g | 0.980 | 0.946 | 0.608 | 0.0 | |
| 449445828 | 1055 | PREDICTED: histone-lysine N-methyltransf | 0.988 | 0.955 | 0.603 | 0.0 | |
| 359489550 | 1073 | PREDICTED: histone-lysine N-methyltransf | 0.975 | 0.927 | 0.579 | 0.0 | |
| 297745446 | 1003 | unnamed protein product [Vitis vinifera] | 0.961 | 0.978 | 0.598 | 0.0 | |
| 356522510 | 989 | PREDICTED: histone-lysine N-methyltransf | 0.872 | 0.899 | 0.617 | 0.0 | |
| 356560272 | 954 | PREDICTED: histone-lysine N-methyltransf | 0.841 | 0.899 | 0.594 | 0.0 | |
| 297792715 | 1049 | hypothetical protein ARALYDRAFT_918421 [ | 0.898 | 0.873 | 0.552 | 0.0 | |
| 302144034 | 1018 | unnamed protein product [Vitis vinifera] | 0.950 | 0.952 | 0.528 | 0.0 | |
| 145332921 | 982 | histone-lysine N-methyltransferase ATX3 | 0.863 | 0.897 | 0.569 | 0.0 | |
| 356518627 | 1067 | PREDICTED: histone-lysine N-methyltransf | 0.902 | 0.863 | 0.559 | 0.0 |
| >gi|255564717|ref|XP_002523353.1| trithorax, putative [Ricinus communis] gi|223537441|gb|EEF39069.1| trithorax, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1284 bits (3322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1067 (60%), Positives = 771/1067 (72%), Gaps = 67/1067 (6%)
Query: 1 MPNPQFCKIAESCEENEVADEYAYVANPKKRRRRGGDDCHQSLMHVEVDDLSSGSSSFIS 60
MPN + CK+ + ++Y + PKKR+ G D + M+ E+DD SSGS S+I
Sbjct: 11 MPNLKRCKVKKPSISEYEEEDYECLLIPKKRKTNGFDS-YSIGMYTEIDDYSSGSGSWIG 69
Query: 61 EEATCWDPEFEPDLNNFNYKGRGTNRSSDRFRPPALKPSKGRTQILPSRYDDSVLVV--- 117
E + W E + + RPP + S+GR Q+LPSR+ DSV+ +
Sbjct: 70 E-GSYWAGEVQSNSKRLK-------------RPPVSRSSRGRLQMLPSRFSDSVVDMWKN 115
Query: 118 -----GDTDSSFDEEDDVD-IIEVNGDFDKLG--------FTMDKYRFGNSNYRGYNGFD 163
GDTD F EDD D +E DF + F +K+ FG+ N Y+ ++
Sbjct: 116 EECRAGDTD--FSLEDDADGFVEDKEDFINVKRCRYTEKEFVKNKFGFGSCNSNSYSFYE 173
Query: 164 PREYLVSRRPVMPAG-----NVNSLPMAGKKQFMPGFSSRNVERITKEKEKKKKRKDVYK 218
NVN+L ++PGF +++ E KK+KDVYK
Sbjct: 174 EEGNGGIGGVGFNNFQYKNYNVNNLR---SHDYVPGFRYSGAQKLRSEGAGNKKKKDVYK 230
Query: 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRD 278
PEDFALGDLVWAKCG+ YP WP +VIDPIL+APEAVL CC+PG LCVMF+GYSKNGT+RD
Sbjct: 231 PEDFALGDLVWAKCGKRYPWWPGIVIDPILEAPEAVLSCCLPGALCVMFYGYSKNGTRRD 290
Query: 279 YGWVKQGMLFPFAEFMDKCE-PTQLHKSKISGFQIALEEAVLAENGFLDLNLGIGQIGPE 337
Y WVKQGMLFPFAEFMD+ + TQL+ K+S FQ+ALEEA+LAENGFL+ + +
Sbjct: 291 YAWVKQGMLFPFAEFMDRFQGQTQLYNCKMSDFQMALEEAILAENGFLETRVSAAHMALS 350
Query: 338 AYSRRG-QEATGSGQDLEYCPQNQ---------------NACYKVARVCDGCGLFRPCKL 381
+ G QEA+GS QD E+ Q Q NA YK R CD C L PCK
Sbjct: 351 EANLNGFQEASGSSQDQEFYGQYQASIPRNYFSRILLFLNASYKDMRCCDSCNLILPCKT 410
Query: 382 KRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEIS 441
+ K V +T+ +CKHC+KL+KS+QYCGICK IWHHSD GNWVCCDGCNVWVHAECD IS
Sbjct: 411 IKRKASVFQTELICKHCAKLRKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDNIS 470
Query: 442 GKHFKDLEHIDYYCPNCRVKFKFQSSNIGKWQPGVSAVENDGQMVLPDKIMVVCNDVEGA 501
K FKDLE+ DYYCP+CRVKFKF S+ + + V ++ N+GQ PD+I VVCN +EG
Sbjct: 471 RKLFKDLENFDYYCPDCRVKFKFDSNYFERIKLHVKSIVNNGQATPPDEITVVCNGMEGT 530
Query: 502 YFPKLHLVVCRCRSCGPKKLTLSEWERHTGCRAKKWKYSVKVLGTMLPLGKWTMQITEFN 561
Y PKLHL+VC+C SCG +K T SEWERHTGCRAKKWK+SVKV TMLPL KW +QI E+N
Sbjct: 531 YIPKLHLIVCKCGSCGSRKQTPSEWERHTGCRAKKWKHSVKVKDTMLPLEKWLLQIAEYN 590
Query: 562 ADAMDPVKLDEKKLLAFMKEKYEPVSVKWTTERCAICRWVEDWDYNKIIICNRCQIAVHQ 621
+D + LD++KLLAF++EKY+PV KWTTERCA+CRWVEDWD NKIIICNRCQIAVHQ
Sbjct: 591 THGVDTLILDKQKLLAFLQEKYDPVYAKWTTERCAVCRWVEDWDVNKIIICNRCQIAVHQ 650
Query: 622 ECYGVTDVQDFTSWVCRACEMPNAER-------KWGALKPTDVQTLWVHVTCAWFRPEIG 674
ECYGV ++QD TSWVCRACE P+ R K GALKP+D++ LWVHVTCAWFRPE+
Sbjct: 651 ECYGVKNIQDLTSWVCRACETPDVMRECCLCPVKGGALKPSDIEMLWVHVTCAWFRPEVA 710
Query: 675 FLNHEKMEPATGILRIPTNLFLKSCIICKQTHGSCTQCCKCATYFHAMCASRAGYCMEIH 734
FLNHEKMEPATGI RIP+ FLKSC+IC QTHGSC QCCKCATYFHAMCASRAGY ME+H
Sbjct: 711 FLNHEKMEPATGIFRIPSTTFLKSCVICSQTHGSCIQCCKCATYFHAMCASRAGYFMELH 770
Query: 735 SLERYGKQITRKLIYCAVHRTPNPDAVVAFHTPTGVFAGRSLLQNQRGCFRGSRLVSAKR 794
+E+ G Q+T+KL YCAVHRTP+ D+VV +PTGVFA RSLLQ Q GCF GSRL+S +
Sbjct: 771 CIEKNGIQVTKKLAYCAVHRTPSVDSVVVVRSPTGVFAARSLLQKQNGCFGGSRLISYQG 830
Query: 795 TEDSESPS-PDTNDFEPLSASRCRVFKRSKNKSMEREPICHRPMGPRHHSLDAVISLNTY 853
E PS +TN+FEPLS++RCR +KR+ K E EPI HR MG RHHSLDA+ SL+T+
Sbjct: 831 MEGLPEPSTSETNEFEPLSSARCRAYKRTNKKRAEGEPIFHRLMGLRHHSLDAISSLSTH 890
Query: 854 KEVDKPEIFSSFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVT 913
KE+D +FSSFKERL HLQ+TE HRVCFGKSGIHGWGLFARR+IQEGEMV+EYRGEQV
Sbjct: 891 KEMDDSLVFSSFKERLCHLQKTECHRVCFGKSGIHGWGLFARRNIQEGEMVIEYRGEQVR 950
Query: 914 QSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCE 973
+SIADLRE +YR EGKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGD E
Sbjct: 951 RSIADLRESRYRLEGKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDVE 1010
Query: 974 SRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFMN 1020
+RIVLIAKTNVSA DELTYDYLFDPDEHD+LKVPCLC+APNCR FMN
Sbjct: 1011 NRIVLIAKTNVSAADELTYDYLFDPDEHDDLKVPCLCRAPNCRKFMN 1057
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445828|ref|XP_004140674.1| PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cucumis sativus] gi|449487413|ref|XP_004157614.1| PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359489550|ref|XP_002278335.2| PREDICTED: histone-lysine N-methyltransferase ATX4-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297745446|emb|CBI40526.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356522510|ref|XP_003529889.1| PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356560272|ref|XP_003548417.1| PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297792715|ref|XP_002864242.1| hypothetical protein ARALYDRAFT_918421 [Arabidopsis lyrata subsp. lyrata] gi|297310077|gb|EFH40501.1| hypothetical protein ARALYDRAFT_918421 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|302144034|emb|CBI23139.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|145332921|ref|NP_001078326.1| histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] gi|332646730|gb|AEE80251.1| histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356518627|ref|XP_003527980.1| PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1020 | ||||||
| TAIR|locus:2076755 | 1018 | SDG14 "SET domain protein 14" | 0.611 | 0.612 | 0.586 | 6.6e-292 | |
| TAIR|locus:2178446 | 1043 | SDG29 "AT5G53430" [Arabidopsis | 0.649 | 0.634 | 0.629 | 7.7e-251 | |
| TAIR|locus:2132912 | 1027 | SDG16 "SET domain protein 16" | 0.635 | 0.630 | 0.644 | 1e-248 | |
| TAIR|locus:2065923 | 1062 | ATX1 "homologue of trithorax" | 0.409 | 0.393 | 0.328 | 1.9e-59 | |
| TAIR|locus:2198743 | 1083 | ATX2 "trithorax-like protein 2 | 0.409 | 0.385 | 0.331 | 1.8e-56 | |
| MGI|MGI:109565 | 2713 | Wbp7 "WW domain binding protei | 0.244 | 0.091 | 0.353 | 3e-38 | |
| RGD|1308331 | 2705 | Mll4 "myeloid/lymphoid or mixe | 0.202 | 0.076 | 0.387 | 4.9e-38 | |
| UNIPROTKB|J9NZ02 | 2194 | RBM42 "Uncharacterized protein | 0.281 | 0.130 | 0.322 | 7.2e-38 | |
| UNIPROTKB|F1NET5 | 3958 | MLL "Uncharacterized protein" | 0.148 | 0.038 | 0.477 | 7.9e-38 | |
| UNIPROTKB|E1BKN0 | 2711 | LOC785776 "Uncharacterized pro | 0.281 | 0.105 | 0.322 | 9.8e-38 |
| TAIR|locus:2076755 SDG14 "SET domain protein 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2085 (739.0 bits), Expect = 6.6e-292, Sum P(3) = 6.6e-292
Identities = 383/653 (58%), Positives = 473/653 (72%)
Query: 216 VYKPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGT 275
VYKPE+F +GDLVWAKCG+ +PAWPAVVIDPI QAP+ VL+ C+PG +CVMFFGYSK+GT
Sbjct: 181 VYKPEEFTVGDLVWAKCGKRFPAWPAVVIDPISQAPDGVLKHCVPGAICVMFFGYSKDGT 240
Query: 276 QRDYGWVKQGMLFPFAEFMDKCEP-TQLHKSKISGFQIALEEAVLAENGFLDLNLGIGQI 334
QRDY WV+QGM++PF EFMDK + T L K S F ALEEAVLAENG N G +I
Sbjct: 241 QRDYAWVRQGMVYPFTEFMDKFQDQTNLFNYKASEFNKALEEAVLAENG----NFGDAEI 296
Query: 335 -GPEAYSRRGQEATGSGQDLEYCPQNQNACYKVARVCDGCGLFRPCK-LKRMKGLVSETQ 392
P++ AT S QD + Q + ++ R CDGCG P K LKR K E +
Sbjct: 297 ISPDS------SATESDQDYGPASRFQGSYHEDIRTCDGCGSVMPLKSLKRTKDSQPE-E 349
Query: 393 FLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHID 452
LCKHCSKL+KS QYCGICK IWH SD G+WVCCDGC+VWVHAECD I+ + FK+LEH +
Sbjct: 350 LLCKHCSKLRKSNQYCGICKRIWHPSDDGDWVCCDGCDVWVHAECDNITNERFKELEHNN 409
Query: 453 YYCPNCRVKFKFQSSNIGKWQPGVSAVENDGQMVLPDKIMVVCNDVEGAYFPKLHLVVCR 512
YYCP+C+V+ + + + + + E + LPD I VVCN +EG Y K H + C+
Sbjct: 410 YYCPDCKVQHELTPTILEEQNSVFKSTEKTTETGLPDAITVVCNGMEGTYIRKFHAIECK 469
Query: 513 CRSCGPKKLTLSEWERHTGCRAKKWKYSVKVLGTMLPLGKWTMQITEFNADAMDPVKLDE 572
C SCG +K + SEWERHTGCRAKKWKYSV+V TMLPL KW I EF+ ++ LD+
Sbjct: 470 CGSCGSRKQSPSEWERHTGCRAKKWKYSVRVKDTMLPLEKW---IAEFSTYTLETQMLDK 526
Query: 573 KKLLAFMKEKYEPVSVKWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDF 632
+K+L+ ++EKYEPV KWTTERCA+CRWVEDW+ NK+IICNRCQ+AVHQECYGV+ QD
Sbjct: 527 QKMLSLLEEKYEPVRAKWTTERCAVCRWVEDWEENKMIICNRCQVAVHQECYGVSKSQDL 586
Query: 633 TSWVCRACEMPNAER-------KWGALKPTDVQTLWVHVTCAWFRPEIGFLNHEKMEPAT 685
TSWVCRACE P+ ER K GALKP+DV+ LWVHVTCAWFRPE+GFLNHE MEPA
Sbjct: 587 TSWVCRACETPDIERDCCLCPVKGGALKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAV 646
Query: 686 GILRIPTNLFLKSCIICKQTHGSCTQCCKCATYFHAMCASRAGYCMEIHSLERYGKQITR 745
G+ +IP N FLK C ICKQTHGSC CCKCAT+FHAMCASRAGY ME+H LE+ G Q TR
Sbjct: 647 GLFKIPANSFLKVCTICKQTHGSCVHCCKCATHFHAMCASRAGYNMELHCLEKNGVQRTR 706
Query: 746 KLIYCAVHRTPNPDAVVAFHTPTGVFAGRSLLQNQRGCFRGSRLVSAKRTE----DSESP 801
K +YC+ HR P+PD+VV HTP+GVF R+LLQNQ G +GSRLV K+ + +++
Sbjct: 707 KSVYCSFHRKPDPDSVVVVHTPSGVFGSRNLLQNQYGRAKGSRLVLTKKMKLPGFQTQTQ 766
Query: 802 SPDTNDFEPLSASRCRVFKRSKNKSMEREPICHRPMGPRHHSLDAVISLNTYK 854
+ + F+ LSA+RCR++ RS K ++ E I HR GP HHSL A+ +LN++K
Sbjct: 767 AEQSRVFDSLSAARCRIYSRSNTK-IDLEAISHRLKGPSHHSLSAIENLNSFK 818
|
|
| TAIR|locus:2178446 SDG29 "AT5G53430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2132912 SDG16 "SET domain protein 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065923 ATX1 "homologue of trithorax" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198743 ATX2 "trithorax-like protein 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:109565 Wbp7 "WW domain binding protein 7" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1308331 Mll4 "myeloid/lymphoid or mixed-lineage leukemia 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NZ02 RBM42 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NET5 MLL "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BKN0 LOC785776 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9M364 | ATX3_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.5478 | 0.8666 | 0.8683 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.946 |
| 3rd Layer | 2.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1020 | |||
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 3e-36 | |
| pfam13832 | 109 | pfam13832, zf-HC5HC2H_2, PHD-zinc-finger like doma | 1e-30 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 5e-30 | |
| cd05838 | 95 | cd05838, WHSC1_related, The PWWP domain was first | 2e-27 | |
| COG5141 | 669 | COG5141, COG5141, PHD zinc finger-containing prote | 2e-24 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 8e-20 | |
| cd05162 | 87 | cd05162, PWWP, The PWWP domain, named for a conser | 2e-12 | |
| pfam13771 | 89 | pfam13771, zf-HC5HC2H, PHD-like zinc-binding domai | 7e-12 | |
| pfam00855 | 74 | pfam00855, PWWP, PWWP domain | 2e-10 | |
| smart00293 | 63 | smart00293, PWWP, domain with conserved PWWP motif | 4e-10 | |
| cd05836 | 86 | cd05836, N_Pac_NP60, The PWWP domain is an essenti | 2e-09 | |
| cd05834 | 83 | cd05834, HDGF_related, The PWWP domain is an essen | 2e-08 | |
| pfam13831 | 33 | pfam13831, PHD_2, PHD-finger | 5e-07 | |
| cd05839 | 111 | cd05839, BR140_related, The PWWP domain is found i | 6e-06 | |
| pfam00628 | 51 | pfam00628, PHD, PHD-finger | 9e-06 | |
| smart00249 | 47 | smart00249, PHD, PHD zinc finger | 2e-05 | |
| cd05835 | 87 | cd05835, Dnmt3b_related, The PWWP domain is an ess | 2e-04 | |
| cd05840 | 93 | cd05840, SPBC215_ISWI_like, The PWWP domain is a c | 2e-04 |
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 3e-36
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 879 RVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEG-KDCYLFKIS 937
++ KS GWG+ A I +GE + EY GE +T A+ R K Y +G K YLF I
Sbjct: 2 KLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDID 61
Query: 938 EEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFD 997
++ IDA KGN+AR INHSC PNC + V + RIV+ A ++ G+ELT DY D
Sbjct: 62 SDLCIDARRKGNLARFINHSCEPNCELLFVEVNG-DDRIVIFALRDIKPGEELTIDYGSD 120
Query: 998 PDEH 1001
Sbjct: 121 YANE 124
|
Putative methyl transferase, based on outlier plant homologues. Length = 124 |
| >gnl|CDD|206003 pfam13832, zf-HC5HC2H_2, PHD-zinc-finger like domain | Back alignment and domain information |
|---|
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|99899 cd05838, WHSC1_related, The PWWP domain was first identified in the WHSC1 (Wolf-Hirschhorn syndrome candidate 1) protein, a protein implicated in Wolf-Hirschhorn syndrome (WHS) | Back alignment and domain information |
|---|
| >gnl|CDD|227470 COG5141, COG5141, PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|99894 cd05162, PWWP, The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids | Back alignment and domain information |
|---|
| >gnl|CDD|222368 pfam13771, zf-HC5HC2H, PHD-like zinc-binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|216154 pfam00855, PWWP, PWWP domain | Back alignment and domain information |
|---|
| >gnl|CDD|214603 smart00293, PWWP, domain with conserved PWWP motif | Back alignment and domain information |
|---|
| >gnl|CDD|99897 cd05836, N_Pac_NP60, The PWWP domain is an essential part of the cytokine-like nuclear factor n-pac protein, or NP60, which enhances the activity of MAP2K4 and MAP2K6 kinases to phosphorylate p38-alpha | Back alignment and domain information |
|---|
| >gnl|CDD|99895 cd05834, HDGF_related, The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF | Back alignment and domain information |
|---|
| >gnl|CDD|222406 pfam13831, PHD_2, PHD-finger | Back alignment and domain information |
|---|
| >gnl|CDD|99900 cd05839, BR140_related, The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2 | Back alignment and domain information |
|---|
| >gnl|CDD|201356 pfam00628, PHD, PHD-finger | Back alignment and domain information |
|---|
| >gnl|CDD|214584 smart00249, PHD, PHD zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|99896 cd05835, Dnmt3b_related, The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis | Back alignment and domain information |
|---|
| >gnl|CDD|99901 cd05840, SPBC215_ISWI_like, The PWWP domain is a component of the S | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1020 | |||
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG0954 | 893 | consensus PHD finger protein [General function pre | 99.97 | |
| KOG0956 | 900 | consensus PHD finger protein AF10 [General functio | 99.96 | |
| KOG0955 | 1051 | consensus PHD finger protein BR140/LIN-49 [General | 99.96 | |
| COG5141 | 669 | PHD zinc finger-containing protein [General functi | 99.96 | |
| cd05838 | 95 | WHSC1_related The PWWP domain was first identified | 99.92 | |
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 99.89 | |
| cd05836 | 86 | N_Pac_NP60 The PWWP domain is an essential part of | 99.88 | |
| KOG0957 | 707 | consensus PHD finger protein [General function pre | 99.87 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.87 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.86 | |
| cd05834 | 83 | HDGF_related The PWWP domain is an essential part | 99.86 | |
| cd05835 | 87 | Dnmt3b_related The PWWP domain is an essential com | 99.86 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.85 | |
| cd05162 | 87 | PWWP The PWWP domain, named for a conserved Pro-Tr | 99.84 | |
| cd05840 | 93 | SPBC215_ISWI_like The PWWP domain is a component o | 99.8 | |
| PF13832 | 110 | zf-HC5HC2H_2: PHD-zinc-finger like domain | 99.8 | |
| PF00855 | 86 | PWWP: PWWP domain; InterPro: IPR000313 Upon charac | 99.8 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.77 | |
| cd05841 | 83 | BS69_related The PWWP domain is part of BS69 prote | 99.75 | |
| smart00293 | 63 | PWWP domain with conserved PWWP motif. conservatio | 99.73 | |
| cd05837 | 110 | MSH6_like The PWWP domain is present in MSH6, a mi | 99.7 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.63 | |
| cd06080 | 80 | MUM1_like Mutated melanoma-associated antigen 1 (M | 99.57 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.56 | |
| cd05839 | 111 | BR140_related The PWWP domain is found in the BR14 | 99.54 | |
| KOG1904 | 496 | consensus Transcription coactivator [Transcription | 99.53 | |
| PF13771 | 90 | zf-HC5HC2H: PHD-like zinc-binding domain | 99.43 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.42 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.76 | |
| PF01342 | 82 | SAND: SAND domain; InterPro: IPR000770 The SAND do | 98.65 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 98.6 | |
| smart00258 | 73 | SAND SAND domain. | 98.58 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.55 | |
| PF13831 | 36 | PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. | 98.5 | |
| KOG4443 | 694 | consensus Putative transcription factor HALR/MLL3, | 98.45 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 98.21 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 97.83 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 97.42 | |
| KOG1244 | 336 | consensus Predicted transcription factor Requiem/N | 97.41 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 97.41 | |
| KOG4299 | 613 | consensus PHD Zn-finger protein [General function | 97.4 | |
| KOG1973 | 274 | consensus Chromatin remodeling protein, contains P | 97.24 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 97.13 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 97.08 | |
| COG5034 | 271 | TNG2 Chromatin remodeling protein, contains PhD zi | 96.79 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 96.21 | |
| PF07227 | 446 | DUF1423: Protein of unknown function (DUF1423); In | 96.06 | |
| smart00508 | 26 | PostSET Cysteine-rich motif following a subset of | 96.01 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 95.91 | |
| KOG1084 | 375 | consensus Transcription factor TCF20 [Transcriptio | 95.51 | |
| PF15446 | 175 | zf-PHD-like: PHD/FYVE-zinc-finger like domain | 95.02 | |
| KOG0825 | 1134 | consensus PHD Zn-finger protein [General function | 93.73 | |
| KOG4443 | 694 | consensus Putative transcription factor HALR/MLL3, | 93.4 | |
| PF13639 | 44 | zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C | 93.13 | |
| KOG1973 | 274 | consensus Chromatin remodeling protein, contains P | 92.95 | |
| PF13831 | 36 | PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. | 92.55 | |
| KOG0955 | 1051 | consensus PHD finger protein BR140/LIN-49 [General | 92.1 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 89.37 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 87.52 | |
| PF13341 | 78 | RAG2_PHD: RAG2 PHD domain; PDB: 2JWO_A 2V86_B 2V85 | 87.3 | |
| COG5034 | 271 | TNG2 Chromatin remodeling protein, contains PhD zi | 85.35 | |
| KOG1244 | 336 | consensus Predicted transcription factor Requiem/N | 83.84 | |
| KOG0383 | 696 | consensus Predicted helicase [General function pre | 83.62 | |
| KOG0954 | 893 | consensus PHD finger protein [General function pre | 82.37 | |
| KOG1632 | 345 | consensus Uncharacterized PHD Zn-finger protein [G | 81.41 | |
| KOG4299 | 613 | consensus PHD Zn-finger protein [General function | 81.4 |
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=897.17 Aligned_cols=916 Identities=42% Similarity=0.689 Sum_probs=714.0
Q ss_pred CCccccccccccccchhhhhhccccCcccccC-------CCC-ccccCCcccccccccc-----cccccccccccccCCC
Q 036712 2 PNPQFCKIAESCEENEVADEYAYVANPKKRRR-------RGG-DDCHQSLMHVEVDDLS-----SGSSSFISEEATCWDP 68 (1020)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 68 (1020)
++|+||+++..-+. .++|++. +|- ++|.|+++++.++.+. .++.+||++.+
T Consensus 13 ~~~rrc~~~~e~~~-----------~~~k~~~~~~~~~~~~~~~~~~n~~~~~~~~~vp~~t~~~~~~sv~~~t~----- 76 (1005)
T KOG1080|consen 13 RNLRRCKIGTEIEY-----------GRKKGEIIVYKKLQRASVDQPCNSVPELLTSSVPSLTSKEESQSVCSDTS----- 76 (1005)
T ss_pred cchhhhccCCcccc-----------ccccceeEeecccccccccccccccccccccCCCCCCCCCcceeeeecCC-----
Confidence 57999999533322 3444444 333 8999999999887552 33333332210
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCcccCCCCcccccCCccCccccccCCCCCCCC-ccccccccccccCccccccccc
Q 036712 69 EFEPDLNNFNYKGRGTNRSSDRFRPPALKPSKGRTQILPSRYDDSVLVVGDTDSSFD-EEDDVDIIEVNGDFDKLGFTMD 147 (1020)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 147 (1020)
+.||+||++++||||+|+++..|+++.-.. +.+.-++++++.+.+++.....
T Consensus 77 ---------------------------~~~s~~~~~~~~s~~~~~~~~~~~~~~~~ke~~~~~~~~~~~~~~~k~~~s~~ 129 (1005)
T KOG1080|consen 77 ---------------------------KKSSRGRVRAVPSRFRDSNVGTWRSSTPSKEFETEGEILKVNSEFEEVKVSSG 129 (1005)
T ss_pred ---------------------------CccccCCcccccccccccccccCCcccccccccCcceeeecccccCCceeccC
Confidence 899999999999999999999999994442 2233335566666665432222
Q ss_pred ccccCCCccCCCCCCCCcccc---cccccccCCCCcCCCCcccccccCCcccccchhhhhHHHHhhhhcccccCCCCCCC
Q 036712 148 KYRFGNSNYRGYNGFDPREYL---VSRRPVMPAGNVNSLPMAGKKQFMPGFSSRNVERITKEKEKKKKRKDVYKPEDFAL 224 (1020)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (1020)
..-++ -+..++...+...|+ ++| . .+..+.... .- ..+....++... .+++++.|.+++|+.
T Consensus 130 ~~~~~-~~~~s~~~~~~~~~~ss~~~~-~--~~~~~s~~~---~~---~i~~~~~~p~~~-----~~~~~~~~~~~~~~~ 194 (1005)
T KOG1080|consen 130 SSKLH-PSKDSKVFPRKDNPDSSEVSC-I--DYWEASQDR---YD---EIVANDGMPLKS-----DASSKGVYKPEEFTV 194 (1005)
T ss_pred ccccC-cccccccCCcCCCCcccccch-h--hhhhcccCc---cc---ceeeccCCcCcc-----cccccccccCccccc
Confidence 21111 112223333344443 445 1 111111110 00 111122222221 224469999999999
Q ss_pred CCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccccc-Cccccc
Q 036712 225 GDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC-EPTQLH 303 (1020)
Q Consensus 225 gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~-~q~~~~ 303 (1020)
||+||+|.|++.+.||+.++||..++|..|+..+.+...+|+|||.++..+.+||+|+.++|++||....+.+ .|+++.
T Consensus 195 e~~~~~~~~~~~~~~~a~~~d~~~~~~~~v~as~~~~~~~~~~~~~s~~~~~~~~~~~r~~m~~~~~~~~~~~~~~~~~~ 274 (1005)
T KOG1080|consen 195 GDLVWAKSGRNEPPWPAIVIDPIRQAPRGVLASCLPVAACVMFFGNSGVPTERDYAWVRRGMERPFSRPVRPFQDQTELK 274 (1005)
T ss_pred chhhhcccccCCcccccceeehhhcchhhhhccCcchhhhheeeeccCCccccchhhhhhccccccchhhhhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cCChHHHHHHHHHHHHhcCCcc-----ccccccCCCCChh-hhccccccccCCCCCccCCccccc---------cccCcc
Q 036712 304 KSKISGFQIALEEAVLAENGFL-----DLNLGIGQIGPEA-YSRRGQEATGSGQDLEYCPQNQNA---------CYKVAR 368 (1020)
Q Consensus 304 ~~k~~~f~~Aleea~~ae~g~~-----d~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~---------~~~~~~ 368 (1020)
..+...|++|++||.+||+|+. ++++..++.+++. .+.+..+...+.++.....+.+.- ..-...
T Consensus 275 ~~~~~~~e~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~s~~~v~~~~~~~~~~~ 354 (1005)
T KOG1080|consen 275 REKARSFEQALEEAGLAEQGNWKKDVDDAHLITGDSSATDSALSEGGPSSFSELQKLHEKGFIKSHSSVFRKSDKIHVPS 354 (1005)
T ss_pred ccCccchhHHHHHhhccccccccccccchhhhcCCCccchhhhhccccccccccccccccCCccccccccCCCccccccc
Confidence 9999999999999999999999 5666666777765 566666666666665555444431 256778
Q ss_pred ccCCCCCcCCCCc-cccccccccCcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcc
Q 036712 369 VCDGCGLFRPCKL-KRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKD 447 (1020)
Q Consensus 369 ~C~~Cg~~~p~k~-~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~ 447 (1020)
.|.+|........ +++++...+..++|+.|..+....+.|++|+.++++.+...|+.|+.|+.|+|..|+.+..+.+..
T Consensus 355 ~~~~~~~~p~~~~~~~~~~~~~~~~l~~k~~~~~~~s~~~~g~~~~~~~~~~~~d~~~~~~c~~~~~~~~~~~~~~~~~~ 434 (1005)
T KOG1080|consen 355 TSITKSPPPIAKSAKKTKALPPAQGLLCKECSDETKSNQTCGICKRIWHSSDSGDWVRCDGCDVWIHARCDKISSEKFKY 434 (1005)
T ss_pred cccccCCCCchhhccccCcccccchhhhhhhhchhhccccccccceecccccccceeeecccccceeeccCccccccccc
Confidence 8999998877777 889998888899999999999999999999999999999999999999999999999998875554
Q ss_pred cCCCce-----------------eCCCcCccccCCCCCcCCCCCCCCcccCCCCccCCCceeEeecccccccccccceee
Q 036712 448 LEHIDY-----------------YCPNCRVKFKFQSSNIGKWQPGVSAVENDGQMVLPDKIMVVCNDVEGAYFPKLHLVV 510 (1020)
Q Consensus 448 l~~~~Y-----------------~Cp~C~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~e~l~V~C~~~~g~l~~k~~~i~ 510 (1020)
..+..+ +|+.|.-.+.....++. ...++.+.
T Consensus 435 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~s~~~~--------------------------------~~~~~~~~ 482 (1005)
T KOG1080|consen 435 SSSGMHNYQTLNFPQEYTALNLSYCPKCKLTFDDLSTDLS--------------------------------PAALARVF 482 (1005)
T ss_pred ccccccccccccchhhhhhhhccccchhheecccccccCC--------------------------------cchheeee
Confidence 422221 34444433222211110 23456678
Q ss_pred eccccCCCcccCchhhhhccCccccCcccceeecCcccchhhHHHHHhhcccC-----CCC--chhhhH--HHHHHHhhh
Q 036712 511 CRCRSCGPKKLTLSEWERHTGCRAKKWKYSVKVLGTMLPLGKWTMQITEFNAD-----AMD--PVKLDE--KKLLAFMKE 581 (1020)
Q Consensus 511 CkC~~c~~~~~SpSefE~h~Gsr~K~wk~sIr~k~~~~pL~~~l~~~~e~~~~-----~~~--~~~~~~--~~ll~~l~~ 581 (1020)
+.+..+...+..+++||+|.+.++++|+...++++..++|-.|......+... ..+ ...... ...+..+-.
T Consensus 483 ~~~~~~~~~k~~~~e~~k~~~~~~~~~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~s~~~~~~~s~~~~~~~~~~ 562 (1005)
T KOG1080|consen 483 HMLRYSVKKKKFLSEWERHTGATAKIWKDSSRVKDELLPLPKWVESRGRSIMNTYNSEKPKSIVLMGKTSVQRMLLELIE 562 (1005)
T ss_pred cccCcchhhhhcccchhhhhcccccccccccccccccccchhhhhhccccccccccccCCcchhhhccchhhhhcCcccc
Confidence 88888888889999999999999999999999999999999999765433221 111 111111 112222224
Q ss_pred cCCCCCCCCCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCCCCcc-------cccCcCCc
Q 036712 582 KYEPVSVKWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEMPNAE-------RKWGALKP 654 (1020)
Q Consensus 582 ~~~p~~~~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~~~~~-------~~gGaLk~ 654 (1020)
.+.+....|+.+.|.+|.+.+.+..|.++.|+.|.+.+|..|||....+....|+|..|...... .++|||++
T Consensus 563 ~~~~~l~~~~t~~c~~~~~~~~~~~n~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~g~al~p 642 (1005)
T KOG1080|consen 563 KREPRLSKWTTERCAVCRDDEDWEKNVSIICDRCTRSVHSECYGNLKSYDGTSWVCDSCETLDIKRSCCLCPVKGGALKP 642 (1005)
T ss_pred cchhhhcCCCcccccccccccccccceeeeeccccccCCCcccccCCCCCCCcchhhccccccCCchhhhccccCcccCC
Confidence 56677777888999999999999999999999999999999999999999889999999974222 28999999
Q ss_pred ccCCCcEEEEEeccccCcccccCCCCccccccccccCccccccccccccCCCceeeecCCccccccccccccCCeEEEEe
Q 036712 655 TDVQTLWVHVTCAWFRPEIGFLNHEKMEPATGILRIPTNLFLKSCIICKQTHGSCTQCCKCATYFHAMCASRAGYCMEIH 734 (1020)
Q Consensus 655 t~i~~~WvHv~CAlw~pev~~~d~~~~~pv~~i~~i~~~~~~~~C~iC~~~~Ga~IqC~~C~~~FHv~CAr~aGl~~e~~ 734 (1020)
++ .+.|+|+.||+|.|++.+.+...|.|+.++..++.......|.+ +|.|.||+.|.+.+|.+||.++++.++..
T Consensus 643 ~d-~gr~~~~e~a~~~~e~~~~~~~~~~p~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 717 (1005)
T KOG1080|consen 643 TD-EGRWVHVECAWFRPEVCLASPERMEPAVGTFKIPALSFLKICFI----HGSCRQCCKCETGSHAMCASRAGYIMEAV 717 (1005)
T ss_pred CC-ccchhhhhchhccccccCCCccCCCCcccccccCccchhhhccc----cccccccchhhhcceehhhcCccChhhhh
Confidence 99 99999999999999999999999999999999999988888888 68999999999999999999999999988
Q ss_pred eeccccccccceEEecccccCCCCCceeeeccCCCcccchhhhhcccccccCCcccccccccC----CCCCCCCCCCCCc
Q 036712 735 SLERYGKQITRKLIYCAVHRTPNPDAVVAFHTPTGVFAGRSLLQNQRGCFRGSRLVSAKRTED----SESPSPDTNDFEP 810 (1020)
Q Consensus 735 ~~~~~g~~~~~~~~yC~~H~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gsRl~s~~R~e~----~~~~~~e~~~~~p 810 (1020)
.++..+.+.+.+.- |..+.++.++.+++|++.+.++...++++++..|.+++...+... .....+....++.
T Consensus 718 ~l~~~~~~~~~~~~----~~~~~~d~~l~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1005)
T KOG1080|consen 718 SLEEVSQQTTSYVK----EDGPGPDSVLKVNTPSGKFGAENLSQNKKSRTDGVRLVLTYKEYAPLREIKSRAEPLNRIDF 793 (1005)
T ss_pred hhhhhhhhhhhhhh----hccCCcccceeecCccccccccchhhhhhccccccccccccccccccccchhcccCCcccCc
Confidence 87776665544322 888999999999999999999999999888888999888776432 1223344557777
Q ss_pred chhhhhhhccccc--CccCCCCCCCCCCCCCccCCcccccccccccccC-Ccccc-hhhHHHHHH-hhccCcccEEEEec
Q 036712 811 LSASRCRVFKRSK--NKSMEREPICHRPMGPRHHSLDAVISLNTYKEVD-KPEIF-SSFKERLYH-LQRTEKHRVCFGKS 885 (1020)
Q Consensus 811 ~~~Ar~~~~~r~~--~k~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~r~~~-~q~~~~~~l~v~~s 885 (1020)
...+++..+.+.. .+.+..+++.+...+...|....+..|+++.... -..++ ....+-++. .++.++++|.++++
T Consensus 794 ~s~~~~~~~~r~~~~~~~~~~~s~~~~~s~~~s~~~s~~~rl~q~rl~a~~~~~~~~~~~~~~~~~~~~~rkk~~~F~~s 873 (1005)
T KOG1080|consen 794 SSEARCRSESRSDNSKSPLAEESESDITSGGSSHDLSAEERLNQFRLSASFTASFILDEAEVLRYNQLKFRKKYVKFGRS 873 (1005)
T ss_pred cccccccchhhcccccccccccccccccccccccchhHHhhhHHHHhhhhcccccccchHHHHHHHHHhhhhhhhccccc
Confidence 8888888877654 5566788889999999999999998888764211 11111 111222222 24456677999999
Q ss_pred CCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcC-CceEEEEeCCeEEEecccCCCcccccCCCCCCCeeE
Q 036712 886 GIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEG-KDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYA 964 (1020)
Q Consensus 886 ~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~-~~~Y~f~i~~~~vIDa~~~GNiaRfINHSC~PN~~~ 964 (1020)
.||||||||.++|.+|+||+||+||+|+...++.||..|...| .++|+|.++.++|||||..|||||||||||+|||++
T Consensus 874 ~iH~wglfa~~~i~~~dmViEY~Ge~vR~~iad~RE~~Y~~~gi~~sYlfrid~~~ViDAtk~gniAr~InHsC~PNCya 953 (1005)
T KOG1080|consen 874 GIHGWGLFAMENIAAGDMVIEYRGELVRSSIADLREARYERMGIGDSYLFRIDDEVVVDATKKGNIARFINHSCNPNCYA 953 (1005)
T ss_pred cccccceeeccCccccceEEEeeceehhhhHHHHHHHHHhccCcccceeeecccceEEeccccCchhheeecccCCCcee
Confidence 9999999999999999999999999999999999999999998 589999999999999999999999999999999999
Q ss_pred EEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccccC
Q 036712 965 RIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 965 ~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ln 1020 (1020)
+++.|+| ..+|+|||.|+|.+||||||||.|..++. +++|+|||++||||||
T Consensus 954 kvi~V~g-~~~IvIyakr~I~~~EElTYDYkF~~e~~---kipClCgap~Crg~~n 1005 (1005)
T KOG1080|consen 954 KVITVEG-DKRIVIYSKRDIAAGEELTYDYKFPTEDD---KIPCLCGAPNCRGFLN 1005 (1005)
T ss_pred eEEEecC-eeEEEEEEecccccCceeeeecccccccc---ccccccCCCccccccC
Confidence 9999988 66999999999999999999999986543 7999999999999999
|
|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0954 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0956 consensus PHD finger protein AF10 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] | Back alignment and domain information |
|---|
| >COG5141 PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd05838 WHSC1_related The PWWP domain was first identified in the WHSC1 (Wolf-Hirschhorn syndrome candidate 1) protein, a protein implicated in Wolf-Hirschhorn syndrome (WHS) | Back alignment and domain information |
|---|
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
| >cd05836 N_Pac_NP60 The PWWP domain is an essential part of the cytokine-like nuclear factor n-pac protein, or NP60, which enhances the activity of MAP2K4 and MAP2K6 kinases to phosphorylate p38-alpha | Back alignment and domain information |
|---|
| >KOG0957 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >cd05834 HDGF_related The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF | Back alignment and domain information |
|---|
| >cd05835 Dnmt3b_related The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >cd05162 PWWP The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids | Back alignment and domain information |
|---|
| >cd05840 SPBC215_ISWI_like The PWWP domain is a component of the S | Back alignment and domain information |
|---|
| >PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain | Back alignment and domain information |
|---|
| >PF00855 PWWP: PWWP domain; InterPro: IPR000313 Upon characterisation of WHSC1, a gene mapping to the Wolf-Hirschhornsyndrome critical region and at its C terminus similar to the Drosophila melanogaster ASH1/trithorax group proteins, a novel protein domain designated PWWP domain was identified [] | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >cd05841 BS69_related The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions | Back alignment and domain information |
|---|
| >smart00293 PWWP domain with conserved PWWP motif | Back alignment and domain information |
|---|
| >cd05837 MSH6_like The PWWP domain is present in MSH6, a mismatch repair protein homologous to bacterial MutS | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >cd06080 MUM1_like Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA) | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >cd05839 BR140_related The PWWP domain is found in the BR140 family, which includes peregrin and BR140-like proteins 1 and 2 | Back alignment and domain information |
|---|
| >KOG1904 consensus Transcription coactivator [Transcription] | Back alignment and domain information |
|---|
| >PF13771 zf-HC5HC2H: PHD-like zinc-binding domain | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF01342 SAND: SAND domain; InterPro: IPR000770 The SAND domain (named after Sp100, AIRE-1, NucP41/75, DEAF-1) is a conserved ~80 residue region found in a number of nuclear proteins, many of which function in chromatin-dependent transcriptional control | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >smart00258 SAND SAND domain | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A | Back alignment and domain information |
|---|
| >KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >KOG4299 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp [] | Back alignment and domain information |
|---|
| >smart00508 PostSET Cysteine-rich motif following a subset of SET domains | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1084 consensus Transcription factor TCF20 [Transcription] | Back alignment and domain information |
|---|
| >PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain | Back alignment and domain information |
|---|
| >KOG0825 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] | Back alignment and domain information |
|---|
| >PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A | Back alignment and domain information |
|---|
| >KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A | Back alignment and domain information |
|---|
| >KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13341 RAG2_PHD: RAG2 PHD domain; PDB: 2JWO_A 2V86_B 2V85_B 2V87_A 2V83_C 2V89_A 2V88_A | Back alignment and domain information |
|---|
| >COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] | Back alignment and domain information |
|---|
| >KOG0383 consensus Predicted helicase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0954 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1632 consensus Uncharacterized PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4299 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1020 | ||||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 4e-34 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 1e-15 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 9e-15 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 2e-14 | ||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 2e-13 | ||
| 3bo5_A | 290 | Crystal Structure Of Methyltransferase Domain Of Hu | 2e-11 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 3e-11 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 5e-11 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 6e-11 | ||
| 1mvh_A | 299 | Structure Of The Set Domain Histone Lysine Methyltr | 1e-10 | ||
| 3hna_A | 287 | Crystal Structure Of Catalytic Domain Of Human Euch | 2e-10 | ||
| 2igq_A | 285 | Human Euchromatic Histone Methyltransferase 1 Lengt | 2e-10 | ||
| 3fpd_A | 261 | G9a-Like Protein Lysine Methyltransferase Inhibitio | 2e-10 | ||
| 3k5k_A | 283 | Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin | 4e-10 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-10 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-10 | ||
| 2o8j_A | 281 | Human Euchromatic Histone Methyltransferase 2 Lengt | 4e-10 | ||
| 1ml9_A | 302 | Structure Of The Neurospora Set Domain Protein Dim- | 8e-10 | ||
| 4i51_A | 286 | Methyltransferase Domain Of Human Euchromatic Histo | 1e-09 | ||
| 2l43_A | 88 | Structural Basis For Histone Code Recognition By Br | 3e-04 | ||
| 2ku3_A | 71 | Solution Structure Of Brd1 Phd1 Finger Length = 71 | 3e-04 |
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
|
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
| >pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
| >pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 | Back alignment and structure |
| >pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 | Back alignment and structure |
| >pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 | Back alignment and structure |
| >pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 | Back alignment and structure |
| >pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 | Back alignment and structure |
| >pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 | Back alignment and structure |
| >pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 | Back alignment and structure |
| >pdb|2L43|A Chain A, Structural Basis For Histone Code Recognition By Brpf2-Phd1 Finger Length = 88 | Back alignment and structure |
| >pdb|2KU3|A Chain A, Solution Structure Of Brd1 Phd1 Finger Length = 71 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
Score = 234 bits (598), Expect = 2e-71
Identities = 72/188 (38%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 833 CHRPMGPRHHSLDAVISLNTYKEVDKPEIFSSFKERLYHLQRTEKHRVCFGKSGIHGWGL 892
HR + + + + + R HL++T K V +S IHG GL
Sbjct: 7 MHRQPPEYNPNDEEEEEVQLKSARRATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGL 66
Query: 893 FARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGNIAR 952
F +R+I GEMV+EY G + D REK Y +G CY+F+I + V+DAT GN AR
Sbjct: 67 FCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAAR 126
Query: 953 LINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKA 1012
INHSC PNCY+R++++ + IV+ A + G+ELTYDY F ++ K+PC C A
Sbjct: 127 FINHSCEPNCYSRVINIDG-QKHIVIFAMRKIYRGEELTYDYKFPIEDASN-KLPCNCGA 184
Query: 1013 PNCRMFMN 1020
CR F+N
Sbjct: 185 KKCRKFLN 192
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2 Length = 110 | Back alignment and structure |
|---|
| >2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe} Length = 108 | Back alignment and structure |
|---|
| >3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} Length = 154 | Back alignment and structure |
|---|
| >2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
| >1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A* Length = 147 | Back alignment and structure |
|---|
| >3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} PDB: 3qj6_A* 3eae_A 1n27_A Length = 94 | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A* Length = 158 | Back alignment and structure |
|---|
| >1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A Length = 110 | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A* Length = 130 | Back alignment and structure |
|---|
| >1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 64 | Back alignment and structure |
|---|
| >3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A Length = 183 | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* Length = 528 | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 | Back alignment and structure |
|---|
| >1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 Length = 76 | Back alignment and structure |
|---|
| >2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66 | Back alignment and structure |
|---|
| >1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 | Back alignment and structure |
|---|
| >1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2 Length = 79 | Back alignment and structure |
|---|
| >3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} Length = 75 | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} Length = 52 | Back alignment and structure |
|---|
| >3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} Length = 68 | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 72 | Back alignment and structure |
|---|
| >2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens} Length = 105 | Back alignment and structure |
|---|
| >2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group} Length = 68 | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 | Back alignment and structure |
|---|
| >2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* Length = 52 | Back alignment and structure |
|---|
| >1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 78 | Back alignment and structure |
|---|
| >2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A* Length = 65 | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* Length = 488 | Back alignment and structure |
|---|
| >1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1020 | |||
| 2w5y_A | 192 | Histone-lysine N-methyltransferase HRX; transcript | 100.0 | |
| 3ooi_A | 232 | Histone-lysine N-methyltransferase, H3 lysine-36 l | 100.0 | |
| 3ope_A | 222 | Probable histone-lysine N-methyltransferase ASH1L; | 100.0 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 100.0 | |
| 3bo5_A | 290 | Histone-lysine N-methyltransferase setmar; SET dom | 99.98 | |
| 2r3a_A | 300 | Histone-lysine N-methyltransferase SUV39H2; histon | 99.97 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 99.97 | |
| 1ml9_A | 302 | Histone H3 methyltransferase DIM-5; adoMet-depende | 99.97 | |
| 3hna_A | 287 | Histone-lysine N-methyltransferase, H3 lysine-9 sp | 99.97 | |
| 3f9x_A | 166 | Histone-lysine N-methyltransferase SETD8; methyltr | 99.96 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.91 | |
| 1n3j_A | 119 | A612L, histone H3 lysine methyltransferase; beta b | 99.9 | |
| 2qpw_A | 149 | PR domain zinc finger protein 2; methyltransferase | 99.9 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.89 | |
| 3s8p_A | 273 | Histone-lysine N-methyltransferase SUV420H1; SET d | 99.88 | |
| 3qby_A | 94 | Hepatoma-derived growth factor-related protein 2; | 99.87 | |
| 2daq_A | 110 | WHSC1L1 protein, isoform long; PWWP domain, struct | 99.86 | |
| 4fu6_A | 153 | PC4 and SFRS1-interacting protein; structural geno | 99.84 | |
| 3llr_A | 154 | DNA (cytosine-5)-methyltransferase 3A; DNA methylt | 99.82 | |
| 1ri0_A | 110 | Hepatoma-derived growth factor; HDGF, HATH domain, | 99.82 | |
| 2l89_A | 108 | PWWP domain-containing protein 1; histone binding, | 99.82 | |
| 1khc_A | 147 | DNA cytosine-5 methyltransferase 3B2; five beta-sh | 99.81 | |
| 2gfu_A | 134 | DNA mismatch repair protein MSH6; PWWP domain, tud | 99.8 | |
| 3rq4_A | 247 | Histone-lysine N-methyltransferase SUV420H2; suppr | 99.8 | |
| 3pfs_A | 158 | Bromodomain and PHD finger-containing protein 3; s | 99.77 | |
| 1h3z_A | 109 | Hypothetical 62.8 kDa protein C215.07C; nuclear pr | 99.77 | |
| 3ep0_A | 170 | PR domain zinc finger protein 12; PR domain-contai | 99.71 | |
| 3l42_A | 130 | Peregrin; transcription regulation, histone H3 ace | 99.69 | |
| 3dal_A | 196 | PR domain zinc finger protein 1; methyltransferase | 99.65 | |
| 3db5_A | 151 | PR domain zinc finger protein 4; methyltransferase | 99.65 | |
| 3ray_A | 237 | PR domain-containing protein 11; structural genomi | 99.46 | |
| 3ihx_A | 152 | PR domain zinc finger protein 10; PRDM10, methyltr | 99.33 | |
| 3lqh_A | 183 | Histone-lysine N-methyltransferase MLL; PHD finger | 99.33 | |
| 2lq6_A | 87 | Bromodomain-containing protein 1; PHD finger, meta | 99.29 | |
| 1we9_A | 64 | PHD finger family protein; structural genomics, PH | 99.11 | |
| 1wep_A | 79 | PHF8; structural genomics, PHD domain, riken struc | 98.96 | |
| 3v43_A | 112 | Histone acetyltransferase KAT6A; MOZ, PHD finger, | 98.87 | |
| 2vpb_A | 65 | Hpygo1, pygopus homolog 1; gene regulation, WNT si | 98.86 | |
| 2xb1_A | 105 | Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; | 98.86 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.85 | |
| 2kgg_A | 52 | Histone demethylase jarid1A; PHD finger, histone m | 98.81 | |
| 2kwj_A | 114 | Zinc finger protein DPF3; acetyl-lysine, transcrip | 98.79 | |
| 1wem_A | 76 | Death associated transcription factor 1; structura | 98.73 | |
| 1wee_A | 72 | PHD finger family protein; structural genomics, PH | 98.68 | |
| 2ku3_A | 71 | Bromodomain-containing protein 1; PHD finger, chro | 98.66 | |
| 3o70_A | 68 | PHD finger protein 13; PHF13, structural genomics | 98.65 | |
| 3kqi_A | 75 | GRC5, PHD finger protein 2; metal-binding, zinc-fi | 98.63 | |
| 2ysm_A | 111 | Myeloid/lymphoid or mixed-lineage leukemia protein | 98.63 | |
| 2k16_A | 75 | Transcription initiation factor TFIID subunit 3; p | 98.62 | |
| 2l43_A | 88 | N-teminal domain from histone H3.3, linker, PHD1 f | 98.56 | |
| 3o7a_A | 52 | PHD finger protein 13 variant; PHF13, zinc finger, | 98.46 | |
| 1wew_A | 78 | DNA-binding family protein; structural genomics, P | 98.46 | |
| 2rsd_A | 68 | E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant | 98.45 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.44 | |
| 1wen_A | 71 | Inhibitor of growth family, member 4; ING1-like pr | 98.43 | |
| 2ysm_A | 111 | Myeloid/lymphoid or mixed-lineage leukemia protein | 98.43 | |
| 3c6w_A | 59 | P28ING5, inhibitor of growth protein 5; chromatin, | 98.42 | |
| 1weu_A | 91 | Inhibitor of growth family, member 4; structural g | 98.4 | |
| 2g6q_A | 62 | Inhibitor of growth protein 2; protein-peptide com | 98.38 | |
| 2yt5_A | 66 | Metal-response element-binding transcription facto | 98.37 | |
| 2ri7_A | 174 | Nucleosome-remodeling factor subunit BPTF; zinc fi | 98.36 | |
| 2vnf_A | 60 | ING 4, P29ING4, inhibitor of growth protein 4; ace | 98.3 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.29 | |
| 2lv9_A | 98 | Histone-lysine N-methyltransferase MLL5; zinc fing | 98.27 | |
| 4gne_A | 107 | Histone-lysine N-methyltransferase NSD3; zinc fing | 98.26 | |
| 1wev_A | 88 | Riken cDNA 1110020M19; structural genomics, PHD do | 98.22 | |
| 1mm2_A | 61 | MI2-beta; PHD, zinc finger, protein scaffold, DNA | 98.22 | |
| 2kwj_A | 114 | Zinc finger protein DPF3; acetyl-lysine, transcrip | 98.2 | |
| 2jmi_A | 90 | Protein YNG1, ING1 homolog 1; PHD, histone, recogn | 98.14 | |
| 3pur_A | 528 | Lysine-specific demethylase 7 homolog; oxidoreduct | 98.14 | |
| 1ufn_A | 94 | Putative nuclear protein homolog 5830484A20RIK; SA | 98.13 | |
| 3v43_A | 112 | Histone acetyltransferase KAT6A; MOZ, PHD finger, | 98.12 | |
| 1oqj_A | 97 | Glucocorticoid modulatory element binding protein- | 98.11 | |
| 2lri_C | 66 | Autoimmune regulator; Zn binding protein domain, a | 98.09 | |
| 1h5p_A | 95 | Nuclear autoantigen SP100-B; transcription, DNA bi | 98.08 | |
| 3kv5_D | 488 | JMJC domain-containing histone demethylation prote | 98.08 | |
| 1x4i_A | 70 | Inhibitor of growth protein 3; structural genomics | 98.06 | |
| 1xwh_A | 66 | Autoimmune regulator; PHD domain, Zn binding domai | 98.05 | |
| 1f62_A | 51 | Transcription factor WSTF; Zn-finger; NMR {Homo sa | 98.03 | |
| 3kv4_A | 447 | PHD finger protein 8; epigenetics, histone CODE, c | 98.02 | |
| 4bbq_A | 117 | Lysine-specific demethylase 2A; oxidoreductase, ub | 98.02 | |
| 1fp0_A | 88 | KAP-1 corepressor; PHD domain, C3HC4 type zinc bin | 97.99 | |
| 2puy_A | 60 | PHD finger protein 21A; PHD finger, histone CODE, | 97.93 | |
| 2yql_A | 56 | PHD finger protein 21A; PHD domain, structural gen | 97.91 | |
| 1f62_A | 51 | Transcription factor WSTF; Zn-finger; NMR {Homo sa | 97.86 | |
| 2e6r_A | 92 | Jumonji/ARID domain-containing protein 1D; PHD dom | 97.83 | |
| 2l5u_A | 61 | Chromodomain-helicase-DNA-binding protein 4; CHD4, | 97.81 | |
| 2e6s_A | 77 | E3 ubiquitin-protein ligase UHRF2; PHD domain, str | 97.72 | |
| 2ku7_A | 140 | MLL1 PHD3-CYP33 RRM chimeric protein; transcriptio | 97.68 | |
| 3asl_A | 70 | E3 ubiquitin-protein ligase UHRF1; histone reader | 97.64 | |
| 2e6s_A | 77 | E3 ubiquitin-protein ligase UHRF2; PHD domain, str | 97.64 | |
| 3o36_A | 184 | Transcription intermediary factor 1-alpha; TRIM24, | 97.59 | |
| 3u5n_A | 207 | E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, b | 97.57 | |
| 3shb_A | 77 | E3 ubiquitin-protein ligase UHRF1; unmodified hist | 97.56 | |
| 2l5u_A | 61 | Chromodomain-helicase-DNA-binding protein 4; CHD4, | 97.56 | |
| 1wen_A | 71 | Inhibitor of growth family, member 4; ING1-like pr | 97.54 | |
| 1xwh_A | 66 | Autoimmune regulator; PHD domain, Zn binding domai | 97.44 | |
| 2yql_A | 56 | PHD finger protein 21A; PHD domain, structural gen | 97.44 | |
| 1mm2_A | 61 | MI2-beta; PHD, zinc finger, protein scaffold, DNA | 97.42 | |
| 2lri_C | 66 | Autoimmune regulator; Zn binding protein domain, a | 97.41 | |
| 2ro1_A | 189 | Transcription intermediary factor 1-beta; KAP, TIF | 97.4 | |
| 2puy_A | 60 | PHD finger protein 21A; PHD finger, histone CODE, | 97.33 | |
| 2ku3_A | 71 | Bromodomain-containing protein 1; PHD finger, chro | 97.32 | |
| 2lv9_A | 98 | Histone-lysine N-methyltransferase MLL5; zinc fing | 97.27 | |
| 2k16_A | 75 | Transcription initiation factor TFIID subunit 3; p | 97.25 | |
| 1weu_A | 91 | Inhibitor of growth family, member 4; structural g | 97.25 | |
| 2yt5_A | 66 | Metal-response element-binding transcription facto | 97.24 | |
| 2e6r_A | 92 | Jumonji/ARID domain-containing protein 1D; PHD dom | 97.24 | |
| 3asl_A | 70 | E3 ubiquitin-protein ligase UHRF1; histone reader | 97.22 | |
| 3ask_A | 226 | E3 ubiquitin-protein ligase UHRF1; histone reader | 97.1 | |
| 2jmi_A | 90 | Protein YNG1, ING1 homolog 1; PHD, histone, recogn | 97.08 | |
| 2vnf_A | 60 | ING 4, P29ING4, inhibitor of growth protein 4; ace | 97.04 | |
| 3c6w_A | 59 | P28ING5, inhibitor of growth protein 5; chromatin, | 97.02 | |
| 4gne_A | 107 | Histone-lysine N-methyltransferase NSD3; zinc fing | 96.96 | |
| 2g6q_A | 62 | Inhibitor of growth protein 2; protein-peptide com | 96.94 | |
| 2l43_A | 88 | N-teminal domain from histone H3.3, linker, PHD1 f | 96.94 | |
| 3o36_A | 184 | Transcription intermediary factor 1-alpha; TRIM24, | 96.88 | |
| 3shb_A | 77 | E3 ubiquitin-protein ligase UHRF1; unmodified hist | 96.81 | |
| 2lbm_A | 142 | Transcriptional regulator ATRX; metal binding prot | 96.74 | |
| 3u5n_A | 207 | E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, b | 96.71 | |
| 3o70_A | 68 | PHD finger protein 13; PHF13, structural genomics | 96.68 | |
| 3ask_A | 226 | E3 ubiquitin-protein ligase UHRF1; histone reader | 96.68 | |
| 1fp0_A | 88 | KAP-1 corepressor; PHD domain, C3HC4 type zinc bin | 96.47 | |
| 1we9_A | 64 | PHD finger family protein; structural genomics, PH | 96.28 | |
| 3ql9_A | 129 | Transcriptional regulator ATRX; zinc finger, trans | 96.19 | |
| 2lbm_A | 142 | Transcriptional regulator ATRX; metal binding prot | 96.13 | |
| 1wev_A | 88 | Riken cDNA 1110020M19; structural genomics, PHD do | 96.04 | |
| 3qxy_A | 449 | N-lysine methyltransferase SETD6; epigenetics, pro | 96.0 | |
| 2ro1_A | 189 | Transcription intermediary factor 1-beta; KAP, TIF | 95.86 | |
| 3rsn_A | 177 | SET1/ASH2 histone methyltransferase complex subun; | 95.82 | |
| 1wew_A | 78 | DNA-binding family protein; structural genomics, P | 95.81 | |
| 1wem_A | 76 | Death associated transcription factor 1; structura | 95.81 | |
| 1x4i_A | 70 | Inhibitor of growth protein 3; structural genomics | 95.8 | |
| 3o7a_A | 52 | PHD finger protein 13 variant; PHF13, zinc finger, | 95.73 | |
| 3ql9_A | 129 | Transcriptional regulator ATRX; zinc finger, trans | 95.66 | |
| 1wep_A | 79 | PHF8; structural genomics, PHD domain, riken struc | 95.6 | |
| 2kgg_A | 52 | Histone demethylase jarid1A; PHD finger, histone m | 95.26 | |
| 2h21_A | 440 | Ribulose-1,5 bisphosphate carboxylase/oxygenase; S | 95.16 | |
| 1wee_A | 72 | PHD finger family protein; structural genomics, PH | 95.15 | |
| 2vpb_A | 65 | Hpygo1, pygopus homolog 1; gene regulation, WNT si | 95.13 | |
| 3pmi_A | 134 | PWWP domain-containing protein MUM1; structural ge | 95.02 | |
| 2xb1_A | 105 | Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; | 94.78 | |
| 2rsd_A | 68 | E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant | 94.72 | |
| 2ri7_A | 174 | Nucleosome-remodeling factor subunit BPTF; zinc fi | 94.49 | |
| 3smt_A | 497 | Histone-lysine N-methyltransferase SETD3; histone | 94.08 | |
| 3kqi_A | 75 | GRC5, PHD finger protein 2; metal-binding, zinc-fi | 93.9 | |
| 3lqh_A | 183 | Histone-lysine N-methyltransferase MLL; PHD finger | 93.21 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 91.77 | |
| 1wil_A | 89 | KIAA1045 protein; ring finger domain, structural g | 91.53 | |
| 3qii_A | 85 | PHD finger protein 20; tudor domain, structural ge | 90.19 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 87.65 | |
| 1v87_A | 114 | Deltex protein 2; ring-H2 domain, zinc-binding dom | 87.46 | |
| 3pur_A | 528 | Lysine-specific demethylase 7 homolog; oxidoreduct | 87.06 | |
| 2ecl_A | 81 | Ring-box protein 2; RNF7, ring domian, zinc-bindin | 86.73 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 86.64 | |
| 2kiz_A | 69 | E3 ubiquitin-protein ligase arkadia; ring-H2 finge | 84.99 | |
| 2l0b_A | 91 | E3 ubiquitin-protein ligase praja-1; zinc finger, | 84.9 | |
| 1x4j_A | 75 | Ring finger protein 38; structural genomics, NPPSF | 82.46 | |
| 2ct2_A | 88 | Tripartite motif protein 32; zinc-finger protein H | 81.91 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 81.66 | |
| 2ep4_A | 74 | Ring finger protein 24; zinc binding, ubiquitin, E | 81.38 | |
| 3kv5_D | 488 | JMJC domain-containing histone demethylation prote | 80.49 |
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=316.12 Aligned_cols=155 Identities=45% Similarity=0.857 Sum_probs=140.3
Q ss_pred hhHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEe
Q 036712 864 SFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVID 943 (1020)
Q Consensus 864 ~~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vID 943 (1020)
.+.+|++++|++...+|.|++++++||||||+++|++|++|+||+|+|++..+++.|+..|+..+.++|+|.++..++||
T Consensus 38 ~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~ID 117 (192)
T 2w5y_A 38 PMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVD 117 (192)
T ss_dssp CHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEE
T ss_pred CcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEE
Confidence 46788889999999999999999999999999999999999999999999999999988888877789999999999999
Q ss_pred cccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccccC
Q 036712 944 ATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 944 a~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ln 1020 (1020)
|+..||++|||||||+|||.++.+.+++ ..+|+|+|+|||++||||||||++..+.. ...|.|.||+++|||+||
T Consensus 118 a~~~Gn~arfiNHSC~PN~~~~~~~~~g-~~~i~i~A~rdI~~GEELt~dY~~~~~~~-~~~~~C~Cgs~~Crg~ln 192 (192)
T 2w5y_A 118 ATMHGNAARFINHSCEPNCYSRVINIDG-QKHIVIFAMRKIYRGEELTYDYKFPIEDA-SNKLPCNCGAKKCRKFLN 192 (192)
T ss_dssp CTTTCCGGGGCEECSSCSEEEEEEEETT-EEEEEEEESSCBCTTCEEEECCCC--------CCBCCCCCTTCCSBCC
T ss_pred CccccChhHhhccCCCCCEEEEEEEECC-cEEEEEEECcccCCCCEEEEEcCCchhcC-CCCceeECCCCCCcCcCC
Confidence 9999999999999999999999888875 78999999999999999999999886543 357899999999999999
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A | Back alignment and structure |
|---|
| >2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2 | Back alignment and structure |
|---|
| >4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A | Back alignment and structure |
|---|
| >3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0 | Back alignment and structure |
|---|
| >1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A | Back alignment and structure |
|---|
| >2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A* | Back alignment and structure |
|---|
| >2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A* | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A* | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A | Back alignment and structure |
|---|
| >2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A | Back alignment and structure |
|---|
| >2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A* | Back alignment and structure |
|---|
| >2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* | Back alignment and structure |
|---|
| >2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* | Back alignment and structure |
|---|
| >1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group} | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
| >1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A | Back alignment and structure |
|---|
| >2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A* | Back alignment and structure |
|---|
| >1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A* | Back alignment and structure |
|---|
| >2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A* | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
| >2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A* | Back alignment and structure |
|---|
| >1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A | Back alignment and structure |
|---|
| >2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* | Back alignment and structure |
|---|
| >2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* | Back alignment and structure |
|---|
| >1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1 | Back alignment and structure |
|---|
| >3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A | Back alignment and structure |
|---|
| >1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1 | Back alignment and structure |
|---|
| >2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1 | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* | Back alignment and structure |
|---|
| >1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A | Back alignment and structure |
|---|
| >1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} | Back alignment and structure |
|---|
| >4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens} | Back alignment and structure |
|---|
| >1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} | Back alignment and structure |
|---|
| >2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B | Back alignment and structure |
|---|
| >2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A | Back alignment and structure |
|---|
| >3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A* | Back alignment and structure |
|---|
| >3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A | Back alignment and structure |
|---|
| >1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A | Back alignment and structure |
|---|
| >2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A | Back alignment and structure |
|---|
| >2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* | Back alignment and structure |
|---|
| >1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B | Back alignment and structure |
|---|
| >3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* | Back alignment and structure |
|---|
| >2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A* | Back alignment and structure |
|---|
| >3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A* | Back alignment and structure |
|---|
| >4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A* | Back alignment and structure |
|---|
| >2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A | Back alignment and structure |
|---|
| >3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A | Back alignment and structure |
|---|
| >3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A* | Back alignment and structure |
|---|
| >3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A | Back alignment and structure |
|---|
| >2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A | Back alignment and structure |
|---|
| >1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* | Back alignment and structure |
|---|
| >2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A | Back alignment and structure |
|---|
| >1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A | Back alignment and structure |
|---|
| >1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* | Back alignment and structure |
|---|
| >2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A* | Back alignment and structure |
|---|
| >3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens} | Back alignment and structure |
|---|
| >2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group} | Back alignment and structure |
|---|
| >2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A* | Back alignment and structure |
|---|
| >3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} | Back alignment and structure |
|---|
| >3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2 | Back alignment and structure |
|---|
| >3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A | Back alignment and structure |
|---|
| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3 | Back alignment and structure |
|---|
| >3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
|---|
| >1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* | Back alignment and structure |
|---|
| >2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1020 | ||||
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 2e-29 | |
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 3e-25 | |
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 1e-22 | |
| d2daqa1 | 97 | b.34.9.2 (A:8-104) Histone-lysine N-methyltransfer | 4e-19 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 6e-17 | |
| d2nlua1 | 100 | b.34.9.2 (A:1-100) Hepatoma-derived growth factor, | 3e-16 | |
| d1khca_ | 137 | b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse | 9e-15 | |
| d1h3za_ | 108 | b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fi | 5e-14 | |
| d1ufna_ | 94 | d.217.1.1 (A:) Putative nuclear protein homolog 58 | 6e-11 | |
| d1we9a_ | 64 | g.50.1.2 (A:) PHD finger protein At5g26210 {Thale | 1e-09 | |
| d1we9a_ | 64 | g.50.1.2 (A:) PHD finger protein At5g26210 {Thale | 2e-04 | |
| d1wema_ | 76 | g.50.1.2 (A:) Death associated transcription facto | 3e-07 | |
| d1mm2a_ | 61 | g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens | 2e-06 | |
| d1wepa_ | 79 | g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus mus | 2e-06 | |
| d1weva_ | 88 | g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu | 3e-06 | |
| d1weva_ | 88 | g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu | 2e-05 | |
| d1weea_ | 72 | g.50.1.2 (A:) PHD finger protein At1g33420 {Thale | 9e-06 | |
| d1fp0a1 | 70 | g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF- | 8e-05 | |
| d1wewa_ | 78 | g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale c | 4e-04 | |
| d1f62a_ | 51 | g.50.1.2 (A:) Williams-Beuren syndrome transcripti | 7e-04 |
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 2e-29
Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 12/159 (7%)
Query: 863 SSFKERLYHLQRTEKHRVCFGKSGIH--GWGLFARRHIQEGEMVVEYRGEQVTQSIADLR 920
S E RV +S I G GLF++ + ++ Y G ++T D R
Sbjct: 6 SCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSR 65
Query: 921 EKQYRK---EGKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIV 977
+ + + + E + ++ NHS PNC +
Sbjct: 66 DWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKC 125
Query: 978 LIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCR 1016
+ V A +ELT Y +D P P
Sbjct: 126 IRTLRAVEADEELTVAYGYDHS-------PPGKSGPEAP 157
|
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
| >d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 97 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
| >d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF {Human (Homo sapiens) [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
| >d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus musculus) [TaxId: 10090]} Length = 137 | Back information, alignment and structure |
|---|
| >d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 108 | Back information, alignment and structure |
|---|
| >d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Length = 79 | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70 | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78 | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1020 | |||
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 99.95 | |
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 99.95 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.9 | |
| d2daqa1 | 97 | Histone-lysine N-methyltransferase NSD3 {Human (Ho | 99.85 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.85 | |
| d2nlua1 | 100 | Hepatoma-derived growth factor, HDGF {Human (Homo | 99.84 | |
| d1h3za_ | 108 | Hypothetical protein SPBC215.07c {Fission yeast (S | 99.79 | |
| d1khca_ | 137 | DNA methyltransferase DNMT3B {Mouse (Mus musculus) | 99.78 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 98.89 | |
| d1ufna_ | 94 | Putative nuclear protein homolog 5830484a20rik {Mo | 98.85 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 98.76 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 98.49 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 98.41 | |
| d1oqja_ | 90 | Glucocorticoid modulatory element binding protein- | 98.21 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 98.21 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 98.19 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 98.17 | |
| d2pnxa1 | 51 | Inhibitor of growth protein 4, Ing4 {Homo sapiens | 98.17 | |
| d1h5pa_ | 95 | Nuclear autoantigen Sp100b {Human (Homo sapiens) [ | 98.14 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 98.08 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 97.88 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 97.86 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 97.78 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 97.78 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 97.73 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 97.69 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 97.64 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 97.23 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 97.04 | |
| d2pnxa1 | 51 | Inhibitor of growth protein 4, Ing4 {Homo sapiens | 96.59 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 96.31 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 96.0 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 95.95 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 95.27 | |
| d1iyma_ | 55 | EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 45 | 94.52 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 90.49 | |
| d2v89a1 | 74 | V(D)J recombination-activating protein 2, Rag2 {Mo | 90.08 | |
| d1v87a_ | 114 | Deltex protein 2 RING-H2 domain {Mouse (Mus muscul | 89.02 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 87.25 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 84.42 | |
| d3dplr1 | 88 | RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase | 81.04 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.95 E-value=1e-28 Score=266.94 Aligned_cols=133 Identities=29% Similarity=0.455 Sum_probs=119.2
Q ss_pred HHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC-----CeE
Q 036712 866 KERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS-----EEV 940 (1020)
Q Consensus 866 ~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~-----~~~ 940 (1020)
.++|+.+|++...+|+|++++.+||||||+++|++|++|+||.|++++..++..|+..|...+ .+|+|.+. ..+
T Consensus 124 ~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~-~~~~~~l~~~~~~~~~ 202 (269)
T d1mvha_ 124 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDG-ITYLFDLDMFDDASEY 202 (269)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCS-CCCEEEECSSCSSSCE
T ss_pred CCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcC-Ccchhheecccccccc
Confidence 467778999999999999999999999999999999999999999999999999988776654 45777763 579
Q ss_pred EEecccCCCcccccCCCCCCCeeEEEEEECCC---eeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 941 VIDATNKGNIARLINHSCMPNCYARIMSVGDC---ESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 941 vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~~---~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
+|||+..||++|||||||+||+.+..+.+++. .++|+|||+|||++||||||||++..+
T Consensus 203 ~iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d 264 (269)
T d1mvha_ 203 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 264 (269)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred eeeeeecCcceEEeecCCCCCcEEEEEEecCCcCccceEEEEECCccCCCCEEEEecCCCcC
Confidence 99999999999999999999999999887653 378999999999999999999998654
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
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| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
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| >d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1oqja_ d.217.1.1 (A:) Glucocorticoid modulatory element binding protein-1 (Gmeb1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1h5pa_ d.217.1.1 (A:) Nuclear autoantigen Sp100b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d2v89a1 g.50.1.2 (A:1414-1487) V(D)J recombination-activating protein 2, Rag2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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